RPSBLAST alignment for GI: 254780967 and conserved domain: TIGR00710
>gnl|CDD|162006 TIGR00710, efflux_Bcr_CflA, drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. Length = 385
Score = 166 bits (423), Expect = 7e-42
Identities = 99/380 (26%), Positives = 191/380 (50%), Gaps = 7/380 (1%)
Query: 3 FVIVIAMLMAINSLGIDIILPCLPKISDSLHLSNENYGQHLISFYLIGYGIAQIFYGPLS 62
F +++ L + LGID+ LP P+I+ L Q ++ YL+G+ Q+ +GPLS
Sbjct: 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIV-QMTLTLYLLGFAAGQLLWGPLS 64
Query: 63 DRFGRKIVMMFGLVIHIISTFIMVTINSFTGMLCMRLIQGIGGAAPRIITISIIRDIYDG 122
DR+GR+ V++ GL I +S+ + N+ +L +R +Q G +A +I+ +++RDIY G
Sbjct: 65 DRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPG 124
Query: 123 RDMAKVLSIAMMIFMIMPILAPSIGQATVALSGGWIGIFVCMGVITTFITLWYYIRFPET 182
+++++ SI M + + P +AP +G + + W IF + + ++ + PET
Sbjct: 125 EELSRIYSILMPVLALAPAVAPLLG-GYILVWLSWHAIFAFLSLAGILLSALIFFILPET 183
Query: 183 LDPRDVRPLNLYAILHSFSLIFKHRASTLYNIANSLTMGAILGFVNSSQQIYVGIYQLGN 242
L ++ Y +F L+ K + Y + + G F + + +Y+ I +
Sbjct: 184 LPYEARIQISTYF--ETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSP 241
Query: 243 L-FPIAFAVGGFAMSIASFINSRLVEKFGIRRVSHYSLLIFFMITGSWLLVQITSNHPIH 301
F + FA+ AM F+N R ++K+G + + L++F ++ L +
Sbjct: 242 SVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFA-VSAVLLEITAILGLGSW 300
Query: 302 LLIFIAFFFLASFQFGLINSNFSSISMEPFSHLAGTASSIFGFINTVISTILGIIIGQSF 361
+I F+ +I+S + ++E F H+AGTAS++FG + V+ I+G ++
Sbjct: 301 AMIIGPMMFVG-IGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIH 359
Query: 362 NGTTYPITIGFFGIAVSSFI 381
T +P+++ +AV S +
Sbjct: 360 GNTAWPMSLSCLVLAVVSVL 379