HHsearch alignment for GI: 254780968 and conserved domain: TIGR02189
>TIGR02189 GlrX-like_plant Glutaredoxin-like family; InterPro: IPR011905 Glutaredoxins , , , also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system . Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond . It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This group of glutaredoxin-like proteins is apparently limited to plants. Multiple isoforms are found in Arabidopsis thaliana and Oryza sativa..
Probab=99.75 E-value=4.6e-19 Score=131.82 Aligned_cols=93 Identities=22% Similarity=0.445 Sum_probs=84.1
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCH---HHHHHHHH-HHCCCCCCEEEECCEEECC
Q ss_conf 9999644897999448999899831799999999749965899711440---37999999-7347877638989989427
Q gi|254780968|r 9 IQNEIKKNDVVLFMKGTPTSPRCGFSGKVVQVLDSLGVSYKGIDVLADD---ALRQSIKE-YSNWPTIPQLYVKGDFIGG 84 (106)
Q Consensus 9 i~~~i~~~~Vvifskgt~~~p~C~~c~~ak~lL~~~~i~y~~~dv~~d~---~~~~~l~~-~sg~~TvPqIFv~G~~IGG 84 (106)
T Consensus 1 v~r~~SE~~VviF~~~s----sCCm~Hv~K~Ll~~lGV~P~V~E~D~~~~~~~~e~Al~~~LG~~~~vP~vFvGG~l~GG 76 (101)
T TIGR02189 1 VRRMVSEKAVVIFSRSS----SCCMCHVVKRLLLDLGVNPAVHEIDKEAAGKDIEKALSQLLGCSPAVPVVFVGGKLVGG 76 (101)
T ss_pred CCCCCCCCCEEEEECCC----CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEECCEEECC
T ss_conf 96310368327883478----83278899998864698847998379722453577888754899998768808866757
Q ss_pred HHHHHHHHHCCCHHHHHHHCC
Q ss_conf 699999998899789985228
Q gi|254780968|r 85 CDIVCEMFESGELHEILSIDR 105 (106)
Q Consensus 85 ~d~l~~l~~~G~L~~ll~~~~ 105 (106)
T Consensus 77 ~~~vma~H~~G~LvP~Lk~ag 97 (101)
T TIGR02189 77 LEKVMALHISGSLVPLLKQAG 97 (101)
T ss_pred CCCEEEEEECCCCCHHHHHCC
T ss_conf 220898876796000224200