HHsearch alignment for GI: 254780968 and conserved domain: TIGR02495
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein; InterPro: IPR012840 This enzyme is a member of the radical-SAM family. It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, IPR009161 from INTERPRO) and presumably fulfils the identical function as NrdG , , which utilises S-adenosyl methionine, an iron-sulphur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centred radical in NrdD..
Probab=92.09 E-value=0.081 Score=32.06 Aligned_cols=67 Identities=18% Similarity=0.420 Sum_probs=39.7
Q ss_pred EEEEECCCCCCC-CCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCEEECCHHHHHHHHHCCC
Q ss_conf 799944899989-9831799999999749965899711440379999997347877638989989427699999998899
Q gi|254780968|r 18 VVLFMKGTPTSP-RCGFSGKVVQVLDSLGVSYKGIDVLADDALRQSIKEYSNWPTIPQLYVKGDFIGGCDIVCEMFESGE 96 (106)
Q Consensus 18 Vvifskgt~~~p-~C~~c~~ak~lL~~~~i~y~~~dv~~d~~~~~~l~~~sg~~TvPqIFv~G~~IGG~d~l~~l~~~G~ 96 (106)
T Consensus 19 ~~iF~~G---Cn~~CpyCHN~~~~~~~~~~-----~~~~~e~~~~~L~~R~~-------ll~gVVitGGE---ptlQ~~e 80 (220)
T TIGR02495 19 FTIFFQG---CNLKCPYCHNSELLIPRKGS-----GEIELEELLEFLRRRQG-------LLDGVVITGGE---PTLQAGE 80 (220)
T ss_pred EEEEECC---CCCCCCCCCCCCCHHHHCCC-----CCCCHHHHHHHHHHCCC-------CEEEEEEECCC---HHHHHHH
T ss_conf 8887027---88998788887640020057-----61027779999873134-------21057872875---3236777
Q ss_pred HHHHHH
Q ss_conf 789985
Q gi|254780968|r 97 LHEILS 102 (106)
Q Consensus 97 L~~ll~ 102 (106)
T Consensus 81 L~d~~~ 86 (220)
T TIGR02495 81 LGDFLR 86 (220)
T ss_pred HHHHHH
T ss_conf 899999