HHsearch alignment for GI: 254780968 and conserved domain: cd02972
>cd02972 DsbA_family DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins. Members of this family contain a redox active CXXC motif (except GSTK and HCCA isomerase) imbedded in a TRX fold, and an alpha helical insert of about 75 residues (shorter in DsbC and DsbG) relative to TRX. DsbA is involved in the oxidative protein folding pathway in prokaryotes, catalyzing disulfide bond formation of proteins secreted into the bacterial periplasm. DsbC and DsbG function as protein disulfide isomerases and chaperones to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins.
Probab=90.17 E-value=1.4 Score=24.86 Aligned_cols=61 Identities=21% Similarity=0.342 Sum_probs=35.4
Q ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHC------CCCEEEEECC--CC----HH--HH---------------H-----HH
Q ss_conf 799944899989983179999999974------9965899711--44----03--79---------------9-----99
Q gi|254780968|r 18 VVLFMKGTPTSPRCGFSGKVVQVLDSL------GVSYKGIDVL--AD----DA--LR---------------Q-----SI 63 (106)
Q Consensus 18 Vvifskgt~~~p~C~~c~~ak~lL~~~------~i~y~~~dv~--~d----~~--~~---------------~-----~l 63 (106)
T Consensus 1 i~~f~-----D~~Cp~C~~~~~~l~~~~~~~~~~v~v~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~~~ 75 (98)
T cd02972 1 IVEFF-----DPLCPYCYLFEPELEKLLYADDGGVRVVYRPFPLLGGMPPNSLAAARAALAAAAQGKFEALHEALADTAL 75 (98)
T ss_pred CEEEE-----CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 97998-----9998708989999999998658867999984774776670389999999998765829999999983899
Q ss_pred HHHHCCCCCCEEEECC-EEEC
Q ss_conf 9973478776389899-8942
Q gi|254780968|r 64 KEYSNWPTIPQLYVKG-DFIG 83 (106)
Q Consensus 64 ~~~sg~~TvPqIFv~G-~~IG 83 (106)
T Consensus 76 ~~~~gi~gtPt~vv~~~~~~~ 96 (98)
T cd02972 76 ARALGVTGTPTFVVNGEKYSG 96 (98)
T ss_pred HHHCCCCCCCEEEECCEECCC
T ss_conf 998198889848899998179