HHsearch results for GI: 254780968 and protein with PDBid: 1nm3_A
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.84 E-value=3.1e-21 Score=143.12 Aligned_cols=84 Identities=26% Similarity=0.513 Sum_probs=70.4
Q ss_pred HHHHHHHHHH----HHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 8999999996----448979994489998998317999999997499658997114403799999973478776389899
Q gi|254780968|r 4 SVNSIIQNEI----KKNDVVLFMKGTPTSPRCGFSGKVVQVLDSLGVSYKGIDVLADDALRQSIKEYSNWPTIPQLYVKG 79 (106)
Q Consensus 4 ~~~~~i~~~i----~~~~Vvifskgt~~~p~C~~c~~ak~lL~~~~i~y~~~dv~~d~~~~~~l~~~sg~~TvPqIFv~G 79 (106)
+++..++++. ..++|+||||. +||||.+||++|+++|++|.+++++.+++.+ ++.+.+|++|||||||+|
T Consensus 154 ~~~~~l~~l~~~~~~~~~v~iysk~-----~C~~C~~ak~lL~~~~i~~~~~~l~~d~~~~-~~~~~~g~~TvPqI~i~g 227 (241)
T 1nm3_A 154 DADTMLKYLAPQHQVQESISIFTKP-----GCPFCAKAKQLLHDKGLSFEEIILGHDATIV-SVRAVSGRTTVPQVFIGG 227 (241)
T ss_dssp SHHHHHHHHCTTSCCCCCEEEEECS-----SCHHHHHHHHHHHHHTCCCEEEETTTTCCHH-HHHHHTCCSSSCEEEETT
T ss_pred CHHHHHHHHHHCCCCCCEEEEEECC-----CCHHHHHHHHHHHHCCCCCEEEECCCCHHHH-HHHHHHCCCCCCEEEECC
T ss_conf 6899998641324778669771138-----8941899999999759983999999888999-999970999439799999
Q ss_pred EEECCHHHHHHHHH
Q ss_conf 89427699999998
Q gi|254780968|r 80 DFIGGCDIVCEMFE 93 (106)
Q Consensus 80 ~~IGG~d~l~~l~~ 93 (106)
++|||||||.+++.
T Consensus 228 ~~IGG~~el~~~la 241 (241)
T 1nm3_A 228 KHIGGSDDLEKYFA 241 (241)
T ss_dssp EEEESHHHHHHC--
T ss_pred EEEECHHHHHHHHC
T ss_conf 99968999999759