HHsearch alignment for GI: 254780970 and conserved domain: COG1973
>COG1973 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].
Probab=99.74 E-value=2.6e-17 Score=137.69 Aligned_cols=265 Identities=22% Similarity=0.353 Sum_probs=183.4
Q ss_pred ECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 9334773689836983999995178877765888872--10558102257677874368775045787568638889988
Q gi|254780970|r 69 QGPGENAGVVDIGGGDCVVFKMESHNHPSYIEPYQGA--ATGVGGILRDIFTMGARPVAAMNSLRFGAIHHPKTKHLLSG 146 (737)
Q Consensus 69 ~~~~~~a~vi~~~~~~~~~~k~EtHNhPs~i~P~~GA--aTg~gG~iRDi~~~Ga~p~a~~~~l~~g~~~~p~~~~~~~~ 146 (737)
T Consensus 108 ~ee~DDaGvvr~~~~yivvaiDGiHSRLSe-fPFLaGFhvtR--AalRDv~vmGa~p~alisDiHla--DDgDVgklfD- 181 (449)
T COG1973 108 PEELDDAGVVRIENDYIVVAIDGIHSRLSE-FPFLAGFHVTR--AALRDVYVMGARPVALISDIHLA--DDGDVGKLFD- 181 (449)
T ss_pred HHHCCCCCEEEECCCEEEEEECCHHHHHHC-CCCHHHHHHHH--HHHHHHHHCCCCCCEEEEEEEEC--CCCCHHHHHH-
T ss_conf 878477772773586699994133433112-75122468779--99988987276430335655633--6754656301-
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEEC--CCCCCCCC-CEEEECCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf 8745886654308721132035521--56766422-11221121135543112256897799965765644410466667
Q gi|254780970|r 147 VVAGIAGYSNSFGVPTVGGEVEFLP--CYNNNIIV-NTFAAGIAKTNAIFSSKARGIGLPLVYLGAKTGRDGIGGASMAS 223 (737)
Q Consensus 147 ~~~G~~~ygN~~G~P~v~G~~~~~~--~y~~~~~v-~~~~~Gi~~~~~~~~~~~~~~Gd~ii~~G~~tg~dGi~Ga~~sS 223 (737)
T Consensus 182 f~AGvtaVsea~~vPl~aGSTLRiGGDmVlGdRl~~~Vg~iGi~k-~~~t~Rr~~~~Gd~IlmT------EGaGGGTi~T 254 (449)
T COG1973 182 FTAGVTAVSEAVGVPLLAGSTLRIGGDMVLGDRLVGAVGAIGISK-SELTPRRRAEPGDVILMT------EGAGGGTIAT 254 (449)
T ss_pred HHHHHHHHHHHHCCCEECCCCEEECCEEEEECHHHCCCCEEEEEC-CCCCHHCCCCCCCEEEEE------CCCCCCEEEH
T ss_conf 221265788874885433652577472676040103210256505-888701038888779994------2788855331
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHH---HHHHHHHHHCCCCC---CHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHCCC
Q ss_conf 77286533344433267989998---88999874011383---0110347752011122332014775289962022046
Q gi|254780970|r 224 EEFGENIAKKRPTVQVGDPFTGK---CLLEACLELMNTDA---VIAIQDMGAAGLTCSAIEMGNQGNLGITLDLDKVPTC 297 (737)
Q Consensus 224 ~~~~~~~~~~~~~VQ~gdp~~ek---~~~~~~~~~~~~~~---i~~~~D~gaGGl~~a~~Ema~~~~~G~~i~l~~vp~~ 297 (737)
T Consensus 255 TAiY~Gm~D----V-----v~ETlnv~fi~a~eai~~s~L~~~vhsMTDVTNGGiRgDA~EISkta~v~lvfDeekv~sl 325 (449)
T COG1973 255 TAIYHGMHD----V-----VEETLNVDFIRACEAIVRSGLLSDVHSMTDVTNGGIRGDALEISKTAGVSLVFDEEKVRSL 325 (449)
T ss_pred HHHHCCCHH----H-----HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEEECHHHHHHH
T ss_conf 444516278----8-----8876274899999999985056653454305477614437876553272699718999864
Q ss_pred ----------CCCCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCEEECCCCEEECCCCCC-CCCCCCC
Q ss_conf ----------6789998986178885089999546758899988870971311221210443100-0258644
Q gi|254780970|r 298 ----------EEGMTAYEMMLSESQERMLMILNPEKQHKAQEILNKWGLHFSIIGITTNDKLFRV-IHRGEEV 359 (737)
Q Consensus 298 ----------~~~l~~~ei~~sEsQeR~~~~v~~~~~~~~~~i~~~~~~~~~~iG~vt~~~~~~v-~~~g~~v 359 (737)
T Consensus 326 iNpkVl~MLeel~ID~lG----vSiDslmii~ped~a~~v~k~~~~agvr~~~vG~Vee~~~~~~l~~~gee~ 394 (449)
T COG1973 326 INPKVLKMLEELNIDPLG----VSIDSLMIIAPEDVADLVKKALRGAGVRAEEVGRVEEGGQGVILVDGGEER 394 (449)
T ss_pred CCHHHHHHHHHCCCCCCC----CCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCEEE
T ss_conf 098999999971888430----202017896661316999999874586236886663278421998799750