HHsearch alignment for GI: 254780970 and conserved domain: cd00396
>cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.
Probab=100.00 E-value=8.5e-39 Score=284.94 Aligned_cols=215 Identities=29% Similarity=0.474 Sum_probs=131.1
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99995178877765888872105581022576778743687750457875686388899888745886654308721132
Q gi|254780970|r 86 VVFKMESHNHPSYIEPYQGAATGVGGILRDIFTMGARPVAAMNSLRFGAIHHPKTKHLLSGVVAGIAGYSNSFGVPTVGG 165 (737)
Q Consensus 86 ~~~k~EtHNhPs~i~P~~GAaTg~gG~iRDi~~~Ga~p~a~~~~l~~g~~~~p~~~~~~~~~~~G~~~ygN~~G~P~v~G 165 (737)
T Consensus 2 l~~~tDg~~~~~~~dP~~~G~~av~~~~sDi~a~Ga~P~~~l~~l~~~~~~~~---~~l~~i~~Gi~~~~~~~gv~ivGG 78 (222)
T cd00396 2 LAMSTDGINPPLAINPWAGGRLAVGGAVNDIAAMGARPIALLASLSLSNGLEV---DILEDVVDGVAEACNQLGVPIVGG 78 (222)
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 59996688994001888899999999988898759985999998883489987---899999999999999969826813
Q ss_pred EEEEECCCCC-CCCCCEEEECCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf 0355215676-642211221121135543112256897799965765644410466667772865333444332679899
Q gi|254780970|r 166 EVEFLPCYNN-NIIVNTFAAGIAKTNAIFSSKARGIGLPLVYLGAKTGRDGIGGASMASEEFGENIAKKRPTVQVGDPFT 244 (737)
Q Consensus 166 ~~~~~~~y~~-~~~v~~~~~Gi~~~~~~~~~~~~~~Gd~ii~~G~~tg~dGi~Ga~~sS~~~~~~~~~~~~~VQ~gdp~~ 244 (737)
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~a~~GD~ii~~g------------------------------------ 122 (222)
T cd00396 79 HTSVSPGTMGHKLSLAVFAIGVVEKDRVIDSSGARPGDVLILTG------------------------------------ 122 (222)
T ss_pred EEEECCCCCCCCEEEEEEEEEEECCCCEECCCCCCCCCEEEEEC------------------------------------
T ss_conf 58975888754617999999875565400656799999999989------------------------------------
Q ss_pred HHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHCCCCC-----CCCHHHHHHCCCCCEEEEEE
Q ss_conf 9888999874011383011034775201112233201477528996202204667-----89998986178885089999
Q gi|254780970|r 245 GKCLLEACLELMNTDAVIAIQDMGAAGLTCSAIEMGNQGNLGITLDLDKVPTCEE-----GMTAYEMMLSESQERMLMIL 319 (737)
Q Consensus 245 ek~~~~~~~~~~~~~~i~~~~D~gaGGl~~a~~Ema~~~~~G~~i~l~~vp~~~~-----~l~~~ei~~sEsQeR~~~~v 319 (737)
T Consensus 123 ----~~~~~~l~~~~~v~a~~DiT~GGL~~~l~e~a~~s~~g~~i~~~~ip~~~~~~~~~~~~~~~~~~~~~~g~lli~v 198 (222)
T cd00396 123 ----VDAVLELVAAGDVHAMHDITDGGLLGTLPELAQASGVGAEIDLEAIPLDEVVRWLCVEHIEEALLFNSSGGLLIAV 198 (222)
T ss_pred ----HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHCCCCHHHHHHHHHCHHHHHHHCCCCEEEEEE
T ss_conf ----4999987645885699867987499999999987697699977657988789988550359997522548699999
Q ss_pred ECCCHHHHHHHHHHHCCEEECCCC
Q ss_conf 546758899988870971311221
Q gi|254780970|r 320 NPEKQHKAQEILNKWGLHFSIIGI 343 (737)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~~~~iG~ 343 (737)
T Consensus 199 ~~e~~~~v~~~l~~~gi~a~vIGr 222 (222)
T cd00396 199 PAEEADAVLLLLNGNGIDAAVIGR 222 (222)
T ss_pred CHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 789999999999966999797192