HHsearch alignment for GI: 254780970 and conserved domain: cd00396
>cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.
Probab=100.00 E-value=1.5e-35 Score=262.72 Aligned_cols=213 Identities=28% Similarity=0.433 Sum_probs=182.6
Q ss_pred EEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 27973045321000010011356789777641027851022322102456668621346999999998522102886654
Q gi|254780970|r 449 ALAFSSDVTPRYVKADPFEGTKQAVAECWRNIIATGAKPLAITDNLNFGNPEKEEIMGQFVHSVKGIREACQILDFPIVS 528 (737)
Q Consensus 449 gia~s~g~~p~~~~~dP~~ga~~AV~Eal~Nl~a~Ga~Plait~~lnf~~P~~~e~~~ql~~av~gl~d~c~~lgipivg 528 (737)
T Consensus 1 ~l~~~tDg~~~~~~~dP~~~G~~av~~~~sDi~a~Ga~P~~~l~~l~~~~~~~~~~l---~~i~~Gi~~~~~~~gv~ivG 77 (222)
T cd00396 1 SLAMSTDGINPPLAINPWAGGRLAVGGAVNDIAAMGARPIALLASLSLSNGLEVDIL---EDVVDGVAEACNQLGVPIVG 77 (222)
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCHHHH---HHHHHHHHHHHHHHCCCEEE
T ss_conf 959996688994001888899999999988898759985999998883489987899---99999999999996982681
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 43200112368666763111222233352023310214389807513776655432678888611678999647989999
Q gi|254780970|r 529 GNVSFYNETNGQSIFPTPTIAGVGILPDYSLMTRIDSAHEGDLILMIGNDGCHLDCSMYSLECASSNIGPPPKVDCHLEK 608 (737)
Q Consensus 529 GkvSl~n~t~~~~I~pTpvi~~vG~v~d~~~~it~~~k~~Gd~I~liG~~~~~LggS~~~~~~~~~~~g~~p~~d~~~~k 608 (737)
T Consensus 78 G~t~~~~~~~~--~~~~~~~~~~G~~~~-~~~~~~~~a~~GD~ii~~g-------------------------------- 122 (222)
T cd00396 78 GHTSVSPGTMG--HKLSLAVFAIGVVEK-DRVIDSSGARPGDVLILTG-------------------------------- 122 (222)
T ss_pred EEEEECCCCCC--CCEEEEEEEEEEECC-CCEECCCCCCCCCEEEEEC--------------------------------
T ss_conf 35897588875--461799999987556-5400656799999999989--------------------------------
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCC---------CHHHHHHCCCCCCEEEEECH
Q ss_conf 999999999995980699464865799999999845897089980566689---------87888729883218999968
Q gi|254780970|r 609 NHGFFVLSMINAKKITACHDISTGGLIITLAEMTISSAKGMDIILPIEIEK---------DPKPFLFGEDQGRYVVCISP 679 (737)
Q Consensus 609 ~~~~~v~~li~~g~I~S~HDiSdGGL~~aL~EMa~as~~G~~I~L~~~~~~---------d~~~~LFsEs~Gr~ii~V~~ 679 (737)
T Consensus 123 --~~~~~~l~~~~~v~a~~DiT~GGL~~~l~e~a~~s~~g~~i~~~~ip~~~~~~~~~~~~~~~~~~~~~~g~lli~v~~ 200 (222)
T cd00396 123 --VDAVLELVAAGDVHAMHDITDGGLLGTLPELAQASGVGAEIDLEAIPLDEVVRWLCVEHIEEALLFNSSGGLLIAVPA 200 (222)
T ss_pred --HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHCCCCHHHHHHHHHCHHHHHHHCCCCEEEEEECH
T ss_conf --499998764588569986798749999999998769769997765798878998855035999752254869999978
Q ss_pred HHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 8099899999857984999899
Q gi|254780970|r 680 ENQDLVMSEANNKNIPLRYLGK 701 (737)
Q Consensus 680 ~~~~~~~~~~~~~gi~~~~IG~ 701 (737)
T Consensus 201 e~~~~v~~~l~~~gi~a~vIGr 222 (222)
T cd00396 201 EEADAVLLLLNGNGIDAAVIGR 222 (222)
T ss_pred HHHHHHHHHHHHCCCCEEECCC
T ss_conf 9999999999966999797192