HHsearch alignment for GI: 254780970 and conserved domain: cd02193

>cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.
Probab=100.00  E-value=0  Score=432.27  Aligned_cols=251  Identities=25%  Similarity=0.295  Sum_probs=225.9

Q ss_pred             EEEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHCCC--CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             279730453210000100113567897776410278--510223221024566686213469999999985221028866
Q gi|254780970|r  449 ALAFSSDVTPRYVKADPFEGTKQAVAECWRNIIATG--AKPLAITDNLNFGNPEKEEIMGQFVHSVKGIREACQILDFPI  526 (737)
Q Consensus       449 gia~s~g~~p~~~~~dP~~ga~~AV~Eal~Nl~a~G--a~Plait~~lnf~~P~~~e~~~ql~~av~gl~d~c~~lgipi  526 (737)
T Consensus         2 g~a~~~~~h~~~s~idP~~Ga~~av~Ea~RNi~~~G~~a~pia~~dn~~~~~~-~p~~~~~l~~av~Gi~d~c~~l~iPv   80 (272)
T cd02193           2 GEAMKIEEHNHPAAIDPAAGAATGVGGAIRDIAATGIDAKPIALSANWMASAG-HPGEDAILYDAVKGVAELCNQLGLPI   80 (272)
T ss_pred             CEEEECCCCCCCCHHCHHHHHHHHHHHHHHCCHHCCCCCCEEEEEECCCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf             42897168899041089999999999999760510888722589850366897-93188999999999999988629885


Q ss_pred             CCCCCCCCCCCCCC--------CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCC--CCCCCHHHHHHHHHC-C-
Q ss_conf             54432001123686--------66763111222233352023310214389807513776--655432678888611-6-
Q gi|254780970|r  527 VSGNVSFYNETNGQ--------SIFPTPTIAGVGILPDYSLMTRIDSAHEGDLILMIGND--GCHLDCSMYSLECAS-S-  594 (737)
Q Consensus       527 vgGkvSl~n~t~~~--------~I~pTpvi~~vG~v~d~~~~it~~~k~~Gd~I~liG~~--~~~LggS~~~~~~~~-~-  594 (737)
T Consensus        81 vsGnvSlyn~~~~~~~~~~~~~~~~Pt~~i~~vG~i~d~~~~-~~~~~~~g~~i~liG~~~~~~~lgGs~~~~~~~~~~~  159 (272)
T cd02193          81 PVGKDRMSMKTRWQEGNEQREMTHPPSLVISAFGRVRDDRHT-LPQLSTEGNALLLIGGGKGHNGLGGTALASVALSYRQ  159 (272)
T ss_pred             ECCCCCEECEEECCCCCCCEEEEEEEEEEEEEEECCCCCCEE-CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCC
T ss_conf             056231300044257883016887124776675203564044-4777789998999915788787532689998740243


Q ss_pred             -CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCC----CCCHHHHHHCCC
Q ss_conf             -789996479899999999999999959806994648657999999998458970899805666----898788872988
Q gi|254780970|r  595 -NIGPPPKVDCHLEKNHGFFVLSMINAKKITACHDISTGGLIITLAEMTISSAKGMDIILPIEI----EKDPKPFLFGED  669 (737)
Q Consensus       595 -~~g~~p~~d~~~~k~~~~~v~~li~~g~I~S~HDiSdGGL~~aL~EMa~as~~G~~I~L~~~~----~~d~~~~LFsEs  669 (737)
T Consensus       160 ~g~~~~~~~d~~~ek~~~~~~~~~i~~glI~s~HDvS~GGL~vaLaEma~~g~~G~~idL~~v~~~~~~~~~~~~lfsEs  239 (272)
T cd02193         160 LGDKSAQVRDPAQEKGFYEAMQALVAAGKLLAWHDRGAGGLLVALAELVFAGHCGVQVDLAALGDDEPDMEPLEIALFES  239 (272)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCH
T ss_conf             79999986899999999999999998399448866588608888999985479649998056758899987899987167


Q ss_pred             CCCEEEEECHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             32189999688099899999857984999899
Q gi|254780970|r  670 QGRYVVCISPENQDLVMSEANNKNIPLRYLGK  701 (737)
Q Consensus       670 ~Gr~ii~V~~~~~~~~~~~~~~~gi~~~~IG~  701 (737)
T Consensus       240 q~R~vv~V~~e~~~~~~~i~~~~~~~~~viG~  271 (272)
T cd02193         240 QERGVIQVRAEDRDAVEEAQYGLADCVHVLGQ  271 (272)
T ss_pred             HHCEEEEECHHHHHHHHHHHCCCCCCEEEECC
T ss_conf             35829998676599999996168983488257