RPSBLAST alignment for GI: 254780970 and conserved domain: TIGR02124
>gnl|CDD|162715 TIGR02124, hypE, hydrogenase expression/formation protein HypE. This family contains HypE (or HupE), a protein required for expression of catalytically active hydrogenase in many systems. It appears to be an accessory protein involved in maturation rather than a regulatory protein involved in expression. HypE shows considerable homology to the thiamine-monophosphate kinase ThiL (TIGR01379) and other enzymes. Length = 320
Score = 49.2 bits (118), Expect = 4e-06
Identities = 69/274 (25%), Positives = 110/274 (40%), Gaps = 49/274 (17%)
Query: 436 DAGVIRVEGHETKALAFSSD---VTPRYVKADPFEGT---KQAVAECWRNIIATGAKPLA 489
DA V+ + G LAFS+D V P + F G K AV ++ +GAKPL
Sbjct: 23 DAAVLELSG---GRLAFSTDSFVVDPLF-----FPGGDIGKLAVCGTVNDVAVSGAKPLY 74
Query: 490 ITDNL----NFGNPEKEEIMGQFVHSVKGIREACQILDFPIVSGNVSFYNETNGQSIFPT 545
++ F + E I VK + EA + IV+G+ + IF
Sbjct: 75 LSCGFILEEGFPIEDLERI-------VKSMAEAARKAGVKIVTGDTKVVEKGKADGIFIN 127
Query: 546 PTIAGVGILPDYSLMTRIDSAHEGDLILM---IGNDGCHLDCSMYSLECASSNIGPPPKV 602
T G+G++P + + GD I++ IG+ G + L +
Sbjct: 128 TT--GIGVIP-SGIPISAHNLQPGDKIIVSGTIGDHGAAILAVREGLG-----FETNLES 179
Query: 603 DCHLEKNHGFFVLSMINA-KKITACHDISTGGLIITLAEMTISSAKGMDI---ILPIEIE 658
DC V +++NA + A D + GGL L E +S G+ I +P++ E
Sbjct: 180 DCAPLNG---LVETLLNAGPAVHAMRDATRGGLAAVLNEWAQASGVGIVIEEEKIPVKEE 236
Query: 659 KDPKPFLFGED------QGRYVVCISPENQDLVM 686
L G D +G+ V+ + PE + V+
Sbjct: 237 VKGACELLGLDPLYLANEGKLVLAVPPEAAEKVL 270