RPSBLAST alignment of GI: 254780970 and protein with PDBid: 1vk3

>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615
 Score =  437 bits (1125), Expect = e-123
 Identities = 206/664 (31%), Positives = 311/664 (46%), Gaps = 69/664 (10%)

Query: 19  DECDQIIHILKRQPTLTEIGIISAMWNEHCSYKSSKKWLRTLPTTGKHVIQGPGENAGVV 78
              + +   L R+PT  E+   S MW+EHC Y  +KK++R LP TG         NAGVV
Sbjct: 16  RYLNILKEKLGREPTFVELQAFSVMWSEHCGYSHTKKYIRRLPKTG------FEGNAGVV 69

Query: 79  DIGGGDCVVFKMESHNHPSYIEPYQGAATGVGGILRDIFTMGARPVAAMNSLRFGAIHHP 138
           ++     V FK+ESHNHPS IEPY GAATGVGGI+RD+  MGARP A  +SL        
Sbjct: 70  NLDDYYSVAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAMGARPTAIFDSLHMS----- 124

Query: 139 KTKHLLSGVVAGIAGYSNSFGVPTVGGEVEFLPCYNNNIIVNTFAAGIAKTNAIFSSKAR 198
               ++ G++ GIA Y NS GVPTVGGE+     Y +N +VN  AAG+ + + +  SKA 
Sbjct: 125 ---RIIDGIIEGIADYGNSIGVPTVGGELRISSLYAHNPLVNVLAAGVVRNDMLVDSKAS 181

Query: 199 GIGLPLVYLGAKTGRDGIGGASMASEEFGENIAKKRPTVQVGDPFTGKCLLEACLELMNT 258
             G  +V  G  TGRDGI GAS ASE+   + A K   +QVGDPF  K L+EA LE++  
Sbjct: 182 RPGQVIVIFGGATGRDGIHGASFASEDLTGDKATKLS-IQVGDPFAEKMLIEAFLEMVEE 240

Query: 259 DAVIAIQDMGAAGLTCSAIEMGNQGNLGITLDLDKVPTCEEGMTAYEMMLSESQERMLMI 318
             V   QD+GA G+  +  E+  +GNLG  + LD+VP  E  M  +E+++SESQERM ++
Sbjct: 241 GLVEGAQDLGAGGVLSATSELVAKGNLGAIVHLDRVPLREPDMEPWEILISESQERMAVV 300

Query: 319 LNPEKQHKAQEILNKWGLHFSIIGITTNDKLFRVIHRGEEVANLPIKALSDEAPEYDRAW 378
            +P+K  +  EI  K  L   ++     + ++RV++R + V  +P++ L++ APE D   
Sbjct: 301 TSPQKASRILEIARKHLLFGDVVAEVIEEPVYRVMYRNDLVMEVPVQLLAN-APEEDIVE 359

Query: 379 CEPITIPPSNPQLLCSDEDCTKSLLKLLSSPNLSSRRWVYEQYDTMIQSNSIQLPGGDAG 438
             P  IP                             R V+EQYD M+ ++   +     G
Sbjct: 360 YTPGKIPEFKRVEFEEVN-----------------AREVFEQYDHMVGTD--TVVPPGFG 400

Query: 439 VIRVEGHETKALAFSSDVTPRYVKADPFEGTKQAVAECWRNIIATGAKPLAITDNLNFGN 498
              +        +  +         D + GT  AV E  R  ++ GA+PLAIT+ +N+G+
Sbjct: 401 AAVMRIKRDGGYSLVTHSRADLALQDTYWGTLIAVLESVRKTLSVGAEPLAITNCVNYGD 460

Query: 499 PEKEEIMGQFVHSVKGIREACQILDFPIVSGNVSFYNETNGQSIFPTPTIAGVGILPDYS 558
           P+ + +       +  ++ AC+    P+ SGN S YN   G+ I PT  +  +G +    
Sbjct: 461 PDVDPV--GLSAMMTALKNACEFSGVPVASGNASLYNTYQGKPIPPTLVVGMLGKVNPQK 518

Query: 559 LMTRIDSAHEGDLILMIGNDGCHLDCSMYSLECASSNIGPPPKVDCHLEKNHGFFVLSMI 618
           +        +   +  +G +   L+                       EK     +  + 
Sbjct: 519 VAKP-----KPSKVFAVGWNDFELE----------------------REKELWRAIRKLS 551

Query: 619 NAKKITACHDISTGGLIITLAEMTISSAK-GMDIILPIEIEKDPKPFLFGEDQGRYVVCI 677
                     +S+  L+      T       +++ LP          +F E      V +
Sbjct: 552 EE----GAFILSSSQLLTRTHVETFREYGLKIEVKLPEVRPAHQMVLVFSERTPVVDVPV 607

Query: 678 SPEN 681
               
Sbjct: 608 KEIG 611