RPSBLAST alignment of GI: 254780970 and protein with PDBid: 3c9u
>3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A Length = 342
Score = 48.4 bits (114), Expect = 6e-06
Identities = 41/300 (13%), Positives = 87/300 (29%), Gaps = 44/300 (14%)
Query: 422 DTMIQSNSIQLPGGDAGVIRVEGHETKALAFSSDVTPRYVK----ADPFEGTKQAVAECW 477
D + ++ ++ G D + K L ++DV V P +A++
Sbjct: 49 DLIKKTLESKVIGDDTAPVEYCS---KKLLLTTDVLNEGVHFLRSYIPEAVGWKAISVNV 105
Query: 478 RNIIATGAKPLAITDNLNFGNPEKEEIMGQFVHSVKGIREACQILDFPIVSGNVSFYNET 537
++IA G P +LN + + +F VK E +
Sbjct: 106 SDVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEFYK------------CEVVG 153
Query: 538 NGQSIFPTPTIAGVGILPDYSLMTRIDSAHEGDLILMIGNDGCHLDCSMYSLECASSNIG 597
S I+ + + R + + + + +E
Sbjct: 154 GNISKSEKIGISVFLVGETERFVGRDGARLGDSVFVSGTLGDSRAGLELLLMEKEEYEPF 213
Query: 598 PPPKVDCHLEKNHGFFVLSMINAKKITACHDISTGGLIITLAEMTISSAKGMDIILPI-- 655
+ HL + + + +K + GL+ + S ++I+
Sbjct: 214 ELALIQRHLRPTA--RIDYVKHIQKYANASMDISDGLVADANHLAQRSGVKIEILSEKLP 271
Query: 656 ----------EIEKDPKPFLF--GEDQGRYVVCISPENQDLVMSEANNKNIPLRYLGKVS 703
+ K+P + GED Y + + E N + + +G+V
Sbjct: 272 LSNELKMYCEKYGKNPIEYALFGGED---YQLLFT------HPKERWNPFLDMTEIGRVE 322