RPSBLAST alignment of GI: 254780970 and protein with PDBid: 3c9u
>3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A Length = 342
Score = 41.1 bits (95), Expect = 0.001
Identities = 35/304 (11%), Positives = 81/304 (26%), Gaps = 36/304 (11%)
Query: 69 QGPGENAGVVDIGGGDCVV---FKMESHNHPSYIEPYQGAATGVGGILRDIFTMGARPVA 125
+ G++ V+ ++ E + P + + D+ G P
Sbjct: 58 KVIGDDTAPVEYCSKKLLLTTDVLNEGVHFLRSYIPEAVGWKAISVNVSDVIANGGLPKW 117
Query: 126 AMNSLRFGAIHHPKTKHLLSGVVAGIAGYSNSFGVPTVGGEVEFLPCYNNNIIVNTFAAG 185
A+ SL G+ + VGG + ++ +
Sbjct: 118 ALISLNLPEDLEVSYVE---RFYIGVKRACEFYKCEVVGGNISKSEKIGISVFLVGETER 174
Query: 186 IAKTNAIFSSKARGIGLPLVYLGAKTGRDGIGGASMASEEFGENIAKKRPTVQVGDPFTG 245
+ + + +G G A + + + +
Sbjct: 175 FVGRDGARLGDSVFV----------SGTLGDSRAGLELLLMEKEEYEPFELALIQRHLRP 224
Query: 246 KCLLEACLELMNTDAVIAIQDMGAAGLTCSAIEMGNQGNLGITLDLDKVPTCEE------ 299
++ + + GL A + + + I + +K+P E
Sbjct: 225 TARIDYVKHIQK---YANASMDISDGLVADANHLAQRSGVKIEILSEKLPLSNELKMYCE 281
Query: 300 --GMTAYEMMLSESQERMLMILNPEKQHKAQEILNKWGLHFSIIGITTNDKLFRVIHRGE 357
G E L ++ L+ +P+++ L + IG + V G+
Sbjct: 282 KYGKNPIEYALFGGEDYQLLFTHPKERWNP-------FLDMTEIGRVEEGE--GVFVDGK 332
Query: 358 EVAN 361
+V
Sbjct: 333 KVEP 336