RPSBLAST alignment of GI: 254780970 and protein with PDBid: 3mcq
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus} Length = 319
Score = 110 bits (275), Expect = 1e-24
Identities = 41/313 (13%), Positives = 103/313 (32%), Gaps = 15/313 (4%)
Query: 58 RTLPTTGKHVIQGPGENAGVVDIGGGDCVVFK----MESHNHPSYIEPYQGAATGVGGIL 113
R + G G++A ++ G + + + + I+P+ + +
Sbjct: 11 RYFRRAHPSAVLGVGDDAALIQPSPGMELAVSADMLVANTHFYPNIDPWLIGWKSLAVNI 70
Query: 114 RDIFTMGARPVAAMNSLRFGAIHHPKTKHLLSGVVAGIAGYSNSFGVPTVGGEVEFLPCY 173
D+ MGA+P A + + +S AG + F + +GG+
Sbjct: 71 SDMAAMGAQPRWATLT----IALPEADEDWISKFAAGFFACAAQFDIALIGGD-----TT 121
Query: 174 NNNIIVNTFAAGIAKTNAIFSSKARGIGLPLVYLGAKTGRDGIGGASMASEEFGENIAKK 233
+ ++ G A ++ +++ G + A++ +
Sbjct: 122 RGPLTISVQIMGETPPGASL-LRSTARADDDIWVSGPLGDAALALAAIQGRYPLSDTELA 180
Query: 234 RPTVQVGDPFTGKCLLEACLELMNTDAVIAIQDMGAAGLTCSAIEMGNQGNLGITLDLDK 293
+ P L +A L ++ I+ + G ++G + L +
Sbjct: 181 ACGKALHQPQPRVVLGQALRGLAHSALDISDGLLADLGHILEHSQVGAEVWLKAIPKSEV 240
Query: 294 VPTCEEGMTAYEMMLSESQE-RMLMILNPEKQHKAQEILNKWGLHFSIIGITTNDKLFRV 352
V + + +M+LS + + + + + + +I + L ++IG T+ + +
Sbjct: 241 VSAHSQEVAIQKMILSGGDDYELCFTASTQHRQQIADIGRQLSLDMAVIGRITDTQQLVI 300
Query: 353 IHRGEEVANLPIK 365
+ L
Sbjct: 301 HGLDDAPLTLKEH 313