HHsearch alignment for GI: 254780971 and conserved domain: COG4285
>COG4285 Uncharacterized conserved protein [Function unknown].
Probab=96.85 E-value=0.049 Score=33.89 Aligned_cols=175 Identities=22% Similarity=0.297 Sum_probs=92.2
Q ss_pred CEEEEEECCCCC--CHHHHHHHHHHHCC--CCEEEEECC----CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 968998449706--47999999998549--963998215----4644564789972873454311406775200212122
Q gi|254780971|r 1 MKTAIVQIPGLN--RDNDMIKAITKIIG--QSPILVWQS----DTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAI 72 (219)
Q Consensus 1 mkvaVl~~pGsN--cd~e~~~A~~~~~~--~~~~~v~~~----~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i 72 (219)
T Consensus 1 m~VlVYn~~GvSp~~lkhtv~sLr~~~~p~y~v~~V~~~~Li~EpW~~~T~lLV~pGG---aDlpY~~--~l~g~g~a~i 75 (253)
T COG4285 1 MNVLVYNGLGVSPYSLKHTVRSLRLFAPPYYAVDRVDAQFLIKEPWEETTLLLVFPGG---ADLPYVQ--VLQGLGTARI 75 (253)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCHHEEEEEEEHEEECCCCHHCEEEEEECCC---CCCHHHH--HHCCHHHHHH
T ss_conf 9069967899881899999999986443111477753010005855102079993288---7743877--7521225558
Q ss_pred HHHHHCCCEEEEECCCHHHHE-----------------ECCCHHHH--------HCCCCCCCEEEEEEEEEECCCHHHHH
Q ss_conf 332205971786064031010-----------------00001011--------01244332454225767525235776
Q gi|254780971|r 73 KKKAQQGIKVMGICNGFQILV-----------------ELNLLPGI--------LMRNCSLKFVCKQVLLEVVNSNTAFT 127 (219)
Q Consensus 73 ~~~~~~g~~vLGICNGfQiL~-----------------elGLlPg~--------l~~N~s~rf~~r~~~~~v~~~~s~~~ 127 (219)
T Consensus 76 ~~yvk~GG~fLGiCAG~YFg~~~veF~~p~~~~vvgkRdL~fFpGT~~GP~y~gF~Y~S~~G--aRaa~l~~~------- 146 (253)
T COG4285 76 KNYVKEGGNFLGICAGGYFGSAYVEFAEPTGIEVVGKRDLGFFPGTARGPAYAGFSYNSESG--ARAAPLKFN------- 146 (253)
T ss_pred HHHHHCCCEEEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--CEEEEEEEC-------
T ss_conf 78875587089983255435347998358996346501114257765787668701037665--133346417-------
Q ss_pred HHCCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHC
Q ss_conf 41379968998620133023308677411542250365316888889881126688869998999848843432
Q gi|254780971|r 128 KSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENII 201 (219)
Q Consensus 128 ~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~ 201 (219)
T Consensus 147 -d~~-~---~~~~~FNGG~~F~~aE~~~~----v~I~ArY~e~~---~~pAAIV~~~vgkG~vvLsGpH~Ey~p 208 (253)
T COG4285 147 -DFL-G---DCYAYFNGGGYFEDAENYPN----VEIEARYEELP---GKPAAIVSCTVGKGLVVLSGPHPEYLP 208 (253)
T ss_pred -CCC-C---CEEEEECCCEEEECCCCCCC----CEEEEEHHCCC---CCCEEEEEEEECCCCEEEECCCHHHCH
T ss_conf -876-2---05799748468852678998----27998630079---984069999956851897368811153