HHsearch alignment for GI: 254780971 and conserved domain: KOG1907

Probab=100.00  E-value=0  Score=462.34  Aligned_cols=215  Identities=27%  Similarity=0.418  Sum_probs=192.3

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCEEEECCCCCCCCCCCHHHHHHHH-----HHHHH
Q ss_conf             689984497064799999999854996399821546-----44564789972873454311406775200-----21212
Q gi|254780971|r    2 KTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDT-----DIPDVDLIVIPGGFSYGDYLRCGAIAART-----PVMQA   71 (219)
Q Consensus         2 kvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~-----~l~~~d~lvipGGFSygD~l~aG~i~~~~-----~~~~~   71 (219)
T Consensus      1060 kVAilREeGvNg~rEMa~af~-~AgF~~~DVtmtDlL~G~~~ld~frGlaf~GGFSYaDvLgSakGWAasil~ne~v~~Q 1138 (1320)
T KOG1907        1060 KVAILREEGVNGDREMAAAFY-AAGFETVDVTMTDLLAGRHHLDDFRGLAFCGGFSYADVLGSAKGWAASILFNESVRSQ 1138 (1320)
T ss_pred             CEEEEECCCCCCHHHHHHHHH-HCCCCEEEEEEEHHHCCCEEHHHHCCEEEECCCCHHHHHCCCCCHHHHEEECHHHHHH
T ss_conf             068861105562799999999-8588136446205435712586705446525743676514543324430107337799


Q ss_pred             HHHHH-HCCCEEEEECCCHHHHEECCCHHH--------HHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEEC
Q ss_conf             23322-059717860640310100000101--------101244332454225767525235776413799689986201
Q gi|254780971|r   72 IKKKA-QQGIKVMGICNGFQILVELNLLPG--------ILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAH  142 (219)
Q Consensus        72 i~~~~-~~g~~vLGICNGfQiL~elGLlPg--------~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaH  142 (219)
T Consensus      1139 F~~F~~R~DtFslGiCNGCQlms~Lg~i~p~~~~~p~~~l~~Nes~rfE~r~~~vkI~~~~SIml~gM~-gs~LgvwvAH 1217 (1320)
T KOG1907        1139 FEAFFNRQDTFSLGICNGCQLMSRLGWIGPEVGKWPDVFLDHNESGRFECRFGMVKIESNVSIMLSGMA-GSVLGVWVAH 1217 (1320)
T ss_pred             HHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCHHHHCCCC-CCCEEEEEEE
T ss_conf             999853787312202417599998645574225787534421544322545788986787302120246-7722258870


Q ss_pred             CCEEEEE-CHHHHHHHHHCCEEEEECCCC---------CCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCC----
Q ss_conf             3302330-867741154225036531688---------88898811266888699989998488434322100677----
Q gi|254780971|r  143 HDGNYFI-DAKGLAEIEKNNQIVFRYASG---------TNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGI----  208 (219)
Q Consensus       143 gEGrf~~-~~~~l~~l~~~~~i~~~Y~d~---------~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~----  208 (219)
T Consensus      1218 GEGRa~f~~e~~~e~~~~~gl~~iryvdd~g~~te~yPfNpNGS~~gIAgicSpdGRhLAMMPHpER~~l~~q~~~yP~s 1297 (1320)
T KOG1907        1218 GEGRATFRSEQNLEHLKKEGLVCIRYVDDYGNVTELYPFNPNGSPDGIAGICSPDGRHLAMMPHPERVFLMWQWSYYPWS 1297 (1320)
T ss_pred             CCCCEECCCHHHHHHHHHCCEEEEEEECCCCCEEEECCCCCCCCCCCCEEEECCCCCEEECCCCCHHEEEEEECCCCCCC
T ss_conf             56621438578898775458347998638898745246589988010013417998753026882350454305657853


Q ss_pred             -------CH--HHHHHHHC
Q ss_conf             -------62--89998642
Q gi|254780971|r  209 -------DG--RGLFASLL  218 (219)
Q Consensus       209 -------dG--~~~f~~~~  218 (219)
T Consensus      1298 ~~~e~~~~sPWirmF~nAr 1316 (1320)
T KOG1907        1298 KRVEWGGLSPWIRMFRNAR 1316 (1320)
T ss_pred             CCCCCCCCCHHHHHHHHHH
T ss_conf             2225568883999999777