HHsearch alignment for GI: 254780971 and conserved domain: cd01750
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ). CobQ plays a role in cobalamin biosythesis. CobQ catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. CobQ belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobQ.
Probab=99.21 E-value=3.1e-10 Score=86.25 Aligned_cols=86 Identities=29% Similarity=0.429 Sum_probs=61.5
Q ss_pred EEEEECCC-CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
Q ss_conf 89984497-06479999999985499639982154644564789972873454311406775200212122332205971
Q gi|254780971|r 3 TAIVQIPG-LNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIK 81 (219)
Q Consensus 3 vaVl~~pG-sNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~ 81 (219)
T Consensus 1 iavi~lp~isNft--Df~~l~~~~~v~v~~v~~-~~~l~~~D~iIlPGsK~t~~DL---~~l~~~Gl~~~i~~~~~~g~~ 74 (194)
T cd01750 1 IAVIRYPDISNFT--DLDPLAREPGVDVRYVEV-PEGLGDADLIILPGSKDTIQDL---AWLRKRGLAEAIKNYARAGGP 74 (194)
T ss_pred CEEEECCCCCCHH--HHHHHHCCCCCEEEEECC-CCCCCCCCEEEECCCCCHHHHH---HHHHHCCHHHHHHHHHHCCCC
T ss_conf 9788269746645--547760069938999679-7764669999989988389999---999874979999999975997
Q ss_pred EEEECCCHHHHEE
Q ss_conf 7860640310100
Q gi|254780971|r 82 VMGICNGFQILVE 94 (219)
Q Consensus 82 vLGICNGfQiL~e 94 (219)
T Consensus 75 vlgICGGyQmLG~ 87 (194)
T cd01750 75 VLGICGGYQMLGK 87 (194)
T ss_pred EEEECHHHHHHHC
T ss_conf 8997365673000