HHsearch results for GI: 254780971 and protein with PDBid: 1ka9_H
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.82 E-value=9.2e-20 Score=145.79 Aligned_cols=181 Identities=22% Similarity=0.265 Sum_probs=120.9
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
||++||.+...|-+. .++||++ .+.++.++ .++.++.++|+||+||+.|+++.. .......+.+.++++.++++
T Consensus 3 mKi~IID~g~gN~~S-v~~~l~~-lg~~~~ii-~~~~~l~~~D~iIlPG~G~~~~~~---~~l~~~~~~~~i~~~~~~~~ 76 (200)
T 1ka9_H 3 MKALLIDYGSGNLRS-AAKALEA-AGFSVAVA-QDPKAHEEADLLVLPGQGHFGQVM---RAFQESGFVERVRRHLERGL 76 (200)
T ss_dssp CEEEEECSSCSCHHH-HHHHHHH-TTCEEEEE-SSTTSCSSCSEEEECCCSCHHHHH---HTTSSSCTHHHHHHHHHTTC
T ss_pred CEEEEEECCCCHHHH-HHHHHHH-CCCCEEEE-CCHHHHHHCCEEEECCCCCHHHHH---HHHHHCCCHHHHHHHHHCCC
T ss_conf 779999489858999-9999998-79989998-899998537989995987589999---76654592999999987599
Q ss_pred EEEEECCCHHHHEE----------CCCHHHHHCCCCCCC-EEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEE
Q ss_conf 17860640310100----------000101101244332-4542257675252357764137996899862013302330
Q gi|254780971|r 81 KVMGICNGFQILVE----------LNLLPGILMRNCSLK-FVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFI 149 (219)
Q Consensus 81 ~vLGICNGfQiL~e----------lGLlPg~l~~N~s~r-f~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~ 149 (219)
|+||||.|+|+|++ ++++++...++...+ -...|..+...+... .+.. ...+..|. |+.
T Consensus 77 PILGIClG~QlL~~~s~e~~~~~gl~~~~g~v~~~~~~~~~~~g~~~i~~~~~~~----~~~~---~~~~~~hs---~~~ 146 (200)
T 1ka9_H 77 PFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVPQMGWNALEFGGAFA----PLTG---RHFYFANS---YYG 146 (200)
T ss_dssp CEEECTHHHHTTSSEETTSTTCCCCCSSSSEEEECCSSSSSEEEEEECEECGGGG----GGTT---CEEEEEES---EEC
T ss_pred CEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCC----CCCC---CCEEEEEE---EEC
T ss_conf 3899829999987647205665772582259952566524331320589730333----3467---61489887---871
Q ss_pred CHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 867741154225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 150 DAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 150 ~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+. ..+.-+...|.+ ..=+|++- .+|++|+++|||++- .+|++|.+|++
T Consensus 147 ~~------~~~~i~~~~~~~-------~~~~a~v~--k~Ni~GvQFHPEkS~------~~G~~lL~~f~ 194 (200)
T 1ka9_H 147 PL------TPYSLGKGEYEG-------TPFTALLA--KENLLAPQFHPEKSG------KAGLAFLALAR 194 (200)
T ss_dssp CC------CTTCCEEEEETT-------EEEEEEEE--CSSEEEESSCTTSSH------HHHHHHHHHHH
T ss_pred CC------CCCCEEEEEECC-------EEEEEEEE--ECCEEEEECCCCCCC------HHHHHHHHHHH
T ss_conf 56------865205899899-------99999999--499999957984257------86999999999