HHsearch results for GI: 254780971 and protein with PDBid: 1ka9_H

>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.82  E-value=9.2e-20  Score=145.79  Aligned_cols=181  Identities=22%  Similarity=0.265  Sum_probs=120.9

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r    1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI   80 (219)
Q Consensus         1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~   80 (219)
                      ||++||.+...|-+. .++||++ .+.++.++ .++.++.++|+||+||+.|+++..   .......+.+.++++.++++
T Consensus         3 mKi~IID~g~gN~~S-v~~~l~~-lg~~~~ii-~~~~~l~~~D~iIlPG~G~~~~~~---~~l~~~~~~~~i~~~~~~~~   76 (200)
T 1ka9_H            3 MKALLIDYGSGNLRS-AAKALEA-AGFSVAVA-QDPKAHEEADLLVLPGQGHFGQVM---RAFQESGFVERVRRHLERGL   76 (200)
T ss_dssp             CEEEEECSSCSCHHH-HHHHHHH-TTCEEEEE-SSTTSCSSCSEEEECCCSCHHHHH---HTTSSSCTHHHHHHHHHTTC
T ss_pred             CEEEEEECCCCHHHH-HHHHHHH-CCCCEEEE-CCHHHHHHCCEEEECCCCCHHHHH---HHHHHCCCHHHHHHHHHCCC
T ss_conf             779999489858999-9999998-79989998-899998537989995987589999---76654592999999987599


Q ss_pred             EEEEECCCHHHHEE----------CCCHHHHHCCCCCCC-EEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEE
Q ss_conf             17860640310100----------000101101244332-4542257675252357764137996899862013302330
Q gi|254780971|r   81 KVMGICNGFQILVE----------LNLLPGILMRNCSLK-FVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFI  149 (219)
Q Consensus        81 ~vLGICNGfQiL~e----------lGLlPg~l~~N~s~r-f~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~  149 (219)
                      |+||||.|+|+|++          ++++++...++...+ -...|..+...+...    .+..   ...+..|.   |+.
T Consensus        77 PILGIClG~QlL~~~s~e~~~~~gl~~~~g~v~~~~~~~~~~~g~~~i~~~~~~~----~~~~---~~~~~~hs---~~~  146 (200)
T 1ka9_H           77 PFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVPQMGWNALEFGGAFA----PLTG---RHFYFANS---YYG  146 (200)
T ss_dssp             CEEECTHHHHTTSSEETTSTTCCCCCSSSSEEEECCSSSSSEEEEEECEECGGGG----GGTT---CEEEEEES---EEC
T ss_pred             CEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCC----CCCC---CCEEEEEE---EEC
T ss_conf             3899829999987647205665772582259952566524331320589730333----3467---61489887---871


Q ss_pred             CHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf             867741154225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r  150 DAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL  218 (219)
Q Consensus       150 ~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~  218 (219)
                      +.      ..+.-+...|.+       ..=+|++-  .+|++|+++|||++-      .+|++|.+|++
T Consensus       147 ~~------~~~~i~~~~~~~-------~~~~a~v~--k~Ni~GvQFHPEkS~------~~G~~lL~~f~  194 (200)
T 1ka9_H          147 PL------TPYSLGKGEYEG-------TPFTALLA--KENLLAPQFHPEKSG------KAGLAFLALAR  194 (200)
T ss_dssp             CC------CTTCCEEEEETT-------EEEEEEEE--CSSEEEESSCTTSSH------HHHHHHHHHHH
T ss_pred             CC------CCCCEEEEEECC-------EEEEEEEE--ECCEEEEECCCCCCC------HHHHHHHHHHH
T ss_conf             56------865205899899-------99999999--499999957984257------86999999999