HHsearch results for GI: 254780971 and protein with PDBid: 1wl8_A
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.52 E-value=2.5e-13 Score=104.67 Aligned_cols=179 Identities=16% Similarity=0.259 Sum_probs=113.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCC----CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 968998449706479999999985499639982154----6445647899728734543114067752002121223322
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSD----TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKA 76 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~----~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~ 76 (219)
|+|+||-+--+|... .++++++ .|.++.++-.+. ....++|++++.||= +.... ....+.+++..
T Consensus 1 mmI~iiD~g~~ft~n-i~~~l~~-lG~~~~i~p~~~~~~~~~~~~~~gv~~sgg~---~~~~~------~~~~~~i~~~~ 69 (189)
T 1wl8_A 1 MMIVIMDNGGQYVHR-IWRTLRY-LGVETKIIPNTTPLEEIKAMNPKGIIFSGGP---SLENT------GNCEKVLEHYD 69 (189)
T ss_dssp CEEEEEECSCTTHHH-HHHHHHH-TTCEEEEEETTCCHHHHHHTCCSEEEECCCS---CTTCC------TTHHHHHHTGG
T ss_pred CEEEEEECCCCHHHH-HHHHHHH-CCCEEEEECCCCCHHHHHHHCCCEEEECCCC---CCCCC------CCHHHHHHHHH
T ss_conf 989999799848999-9999997-8992899969998899983189978758998---78654------66499999998
Q ss_pred HCCCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHH
Q ss_conf 05971786064031010000010110124433245422576752523577641379968998620133023308677411
Q gi|254780971|r 77 QQGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAE 156 (219)
Q Consensus 77 ~~g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~ 156 (219)
+.++|+||||-|+|+|++. +.+...+..... -.|..+.+.+ +++++++.. +.+..+..|..-- +.
T Consensus 70 ~~~~PilGIClG~Q~l~~~--~G~~~~~~~~~~--~g~~~~~~~~-~~~lf~~~~--~~~~~~~~H~~~~--------~~ 134 (189)
T 1wl8_A 70 EFNVPILGICLGHQLIAKF--FGGKVGRGEKAE--YSLVEIEIID-EXEIFKGLP--KRLKVWESHMDEV--------KE 134 (189)
T ss_dssp GTCSCEEEETHHHHHHHHH--HTCEEEECSCCS--CEEEEEEESC-C--CCTTSC--SEEEEEECCSEEE--------EE
T ss_pred HCCCCEEEEEHHHHHHHHH--CCCCCEECCEEE--EEEEEEEEEC-CCEEECCCC--CCEEEEEEEEEEE--------EE
T ss_conf 5599689984213667764--699401232045--5313799927-835653799--8658998557898--------73
Q ss_pred HHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 54225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 157 IEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 157 l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+.++-.+..++.+ + .|+++..++.+++|.|.|||.+. +++|++||+|++
T Consensus 135 ~p~~~~~~a~~~~-----~---~i~~~~~~~~~i~gvQFHPE~s~-----s~~g~~il~nFl 183 (189)
T 1wl8_A 135 LPPKFKILARSET-----C---PIEAMKHEELPIYGVQFHPEVAH-----TEKGEEILRNFA 183 (189)
T ss_dssp CCTTEEEEEEESS-----C---SCSEEEESSSCEEEESSCTTSTT-----STTHHHHHHHHH
T ss_pred CCCCCEEEEECCC-----C---CEEEEEECCCCEEEEECCCCCCC-----CCCHHHHHHHHH
T ss_conf 7986278885289-----8---68999968988999986874589-----924899999999