HHsearch results for GI: 254780971 and protein with PDBid: 2rk3_A
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A 2rk6_A ...
Probab=98.51 E-value=4.7e-07 Score=64.60 Aligned_cols=92 Identities=15% Similarity=0.267 Sum_probs=66.5
Q ss_pred EEEEEECCCCCCHHHHH---HHHHHHCCCCEEEEECCCC---------------------CCCCCCEEEECCCCCCCCCC
Q ss_conf 68998449706479999---9999854996399821546---------------------44564789972873454311
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMI---KAITKIIGQSPILVWQSDT---------------------DIPDVDLIVIPGGFSYGDYL 57 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~---~A~~~~~~~~~~~v~~~~~---------------------~l~~~d~lvipGGFSygD~l 57 (219)
|++|+.++|.. |.|.. ..|. .+++++.++.-.+. ...+||+|++|||.-.
T Consensus 5 Kvlill~dGf~-~~E~~~p~~~L~-~ag~~v~v~s~~~~~~v~~~~g~~v~~d~~~~~~~~~~~yD~lvIpGG~~~---- 78 (197)
T 2rk3_A 5 RALVILAKGAE-EMETVIPVDVMR-RAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLG---- 78 (197)
T ss_dssp EEEEEECTTCC-HHHHHHHHHHHH-HTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHH----
T ss_pred EEEEEECCCCC-HHHHHHHHHHHH-HCCCEEEEEECCCCCCEECCCCCEECCCCCHHHCCCCCCCEEEEECCCCCH----
T ss_conf 99999489977-999999999999-789989999868997177279968826775776676779709998599703----
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHH
Q ss_conf 4067752002121223322059717860640310100000101
Q gi|254780971|r 58 RCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPG 100 (219)
Q Consensus 58 ~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg 100 (219)
+-.......+.+.++++.++++++.+||+|-.+|.+.|||.|
T Consensus 79 -~~~l~~~~~l~~~i~~~~~~~k~i~aiC~G~~~La~agll~g 120 (197)
T 2rk3_A 79 -AQNLSESAAVKEILKEQENRKGLIATICAGPTALLAHEIGFG 120 (197)
T ss_dssp -HHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTT
T ss_pred -HHHHCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCC
T ss_conf -867445999999999987449689600717899998799776