HHsearch results for GI: 254780971 and protein with PDBid: 2vdj_A
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=98.09 E-value=1.5e-05 Score=54.98 Aligned_cols=173 Identities=14% Similarity=0.178 Sum_probs=96.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCE---EEEECC----------------------CCCCCCCCEEEECCCC----
Q ss_conf 96899844970647999999998549963---998215----------------------4644564789972873----
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSP---ILVWQS----------------------DTDIPDVDLIVIPGGF---- 51 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~---~~v~~~----------------------~~~l~~~d~lvipGGF---- 51 (219)
||++||.-=- -..+|..-|.++.+... .+.+.. +.+-..||++|+-|+=
T Consensus 36 l~I~ilNlMP--~k~~TE~qf~rll~~~~~qv~v~~~~~~~h~~~~~~~~~l~~~y~~~~~i~~~~yDglIITGAPve~~ 113 (301)
T 2vdj_A 36 LKIAILNLMP--TKQETEAQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVETL 113 (301)
T ss_dssp EEEEEECCCS--SHHHHHHHHHHHHTCSSSCEEEEEECCCC------------CCEECHHHHTTSCEEEEEECCCTTTTS
T ss_pred HHHEEECCCC--CHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCC
T ss_conf 0211100689--51889999999856898428999888266258998599999872089986026676799718976667
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEEC--CCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHH
Q ss_conf 45431140677520021212233220597178606403101000--0010110124433245422576752523577641
Q gi|254780971|r 52 SYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVEL--NLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKS 129 (219)
Q Consensus 52 SygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~el--GLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~ 129 (219)
.|.|+- ....+.+-+....+..+++||||=|.|++... |...-.+ .+ -.......++....++++++
T Consensus 114 ~fedv~------yw~eL~~ii~wa~~~~~~~LgiCwGaQa~l~~~gGi~k~~~----~~-k~~Gv~~~~~~~~~~pl~~g 182 (301)
T 2vdj_A 114 SFEEVD------YWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPL----KE-KMFGVFEHEVREQHVKLLQG 182 (301)
T ss_dssp CGGGST------THHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEE----EE-EEEEEEEEEECCSSCGGGTT
T ss_pred CCCCCH------HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCC----CC-EEEEEEEEEECCCCCHHHCC
T ss_conf 623162------89999999999997299836551889999999779432457----87-40686898971688620158
Q ss_pred CCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHH
Q ss_conf 37996899862013302330867741154225036531688888988112668886999899984884343
Q gi|254780971|r 130 YKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENI 200 (219)
Q Consensus 130 ~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~ 200 (219)
+. +...+|.++-. .++.+.+.++.+ ..|.... + ......+.+.++|+++++.|||-.
T Consensus 183 ~~--d~f~~PhSR~~---~i~~d~V~~~p~-l~vla~s-~-------~~g~~~~~~~~~r~~~iqGHPEYd 239 (301)
T 2vdj_A 183 FD--ELFFAVHSRHT---EVRESDIREVKE-LTLLANS-E-------EAGVHLVIGQEGRQVFALGHSEYS 239 (301)
T ss_dssp CC--SEEEEEEEEEE---ECCHHHHHTCTT-EEEEEEE-T-------TTEEEEEEEGGGTEEEECSCTTCC
T ss_pred CC--CCCCCCCCCCC---CCCHHHHHCCCC-CCEEEEC-C-------CCCEEEEEECCCCEEEECCCCCCC
T ss_conf 87--42333202541---226878621897-4055204-7-------773189996787735883786667