HHsearch results for GI: 254780971 and protein with PDBid: 3nva_A
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=99.01 E-value=6.5e-09 Score=76.47 Aligned_cols=175 Identities=25% Similarity=0.406 Sum_probs=105.2
Q ss_pred HHHHHHHH---CCCCEEEEECCCC-----------CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 99999985---4996399821546-----------445647899728734543114067752002121223322059717
Q gi|254780971|r 17 MIKAITKI---IGQSPILVWQSDT-----------DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKV 82 (219)
Q Consensus 17 ~~~A~~~~---~~~~~~~v~~~~~-----------~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~v 82 (219)
...|+.++ .+....+.|.+.+ .|.++|++++|||| |++---|+|.| ++-.-++..|-
T Consensus 312 i~EAL~HAg~~~~~kv~I~wIdse~le~~~~~~~~~L~~~dGIlVPGGF--G~RGiEGkI~A-------i~yAREn~IPf 382 (535)
T 3nva_A 312 IKEAIYHASAYIGVRPKLIWIESTDLESDTKNLNEILGNVNGIIVLPGF--GSRGAEGKIKA-------IKYAREHNIPF 382 (535)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEGGGGCCSSSCCTTTTTSCSEEEECCCC--SSTTHHHHHHH-------HHHHHHHTCCE
T ss_pred HHHHHHHHHHHHCCEEEEEEEECHHCCCCHHHHHHHHHCCCCEEECCCC--CCCCCHHHHHH-------HHHHHHCCCCC
T ss_conf 4689986567651323699984023023026799997328818957987--65651489999-------99998649980
Q ss_pred EEECCCHHHHE-E-----CCCH--------HHH------HCCC------C--CCCEEEEEEEEEECCCHHHHHHHCCCCC
Q ss_conf 86064031010-0-----0001--------011------0124------4--3324542257675252357764137996
Q gi|254780971|r 83 MGICNGFQILV-E-----LNLL--------PGI------LMRN------C--SLKFVCKQVLLEVVNSNTAFTKSYKMNQ 134 (219)
Q Consensus 83 LGICNGfQiL~-e-----lGLl--------Pg~------l~~N------~--s~rf~~r~~~~~v~~~~s~~~~~~~~~~ 134 (219)
||||-|||+++ | +||= |.+ ++.. . +-|.-...+.++ ..|...+-+....
T Consensus 383 LGICLGmQ~AVIEfARnVlgl~dAnStEf~~~t~~pVI~lm~eq~~~~~~GGTMRLG~~~~~l~---~gS~~~~iYg~~~ 459 (535)
T 3nva_A 383 LGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILK---EGTIAYQLYGKKV 459 (535)
T ss_dssp EEETHHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEEC---TTSHHHHHHTSSE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEC---CCCHHHHHHCCCC
T ss_conf 2144324899999999855998876433577899988996223577887885667787203757---9889999858783
Q ss_pred EEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCC-CCEEEECCCCHHHCCCCCCCCCHHHH
Q ss_conf 89986201330233086774115422503653168888898811266888699-98999848843432210067762899
Q gi|254780971|r 135 IIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRR-GNVLGMMPHPENIIEKFHGGIDGRGL 213 (219)
Q Consensus 135 ~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~-G~vlgmMPHPER~~~~~~~~~dG~~~ 213 (219)
+ .=.| --||-++++..++|++.+.+..-. +|+| . +..|=-++ -=.+|.+.|||....+.. .-++
T Consensus 460 I---~ERH-RHRYEvN~~y~~~le~~Gl~~sG~----~~~g-~--vEiiEl~~HPfFvg~QFHPEf~Srp~~----phPL 524 (535)
T 3nva_A 460 V---YERH-RHRYEVNPKYVDILEDAGLVVSGI----SENG-L--VEIIELPSNKFFVATQAHPEFKSRPTN----PSPI 524 (535)
T ss_dssp E---EEEE-EECCEECHHHHHHHHHTTCEEEEE----CTTC-C--EEEEECTTSSCEEEESSCGGGGCCSSS----CCHH
T ss_pred C---CCCC-CCCCCCCHHHHHHHHHCCCEEEEE----CCCC-C--EEEEECCCCCEEEEECCCCCCCCCCCC----CCCC
T ss_conf 7---6455-877412889999999689889998----7999-8--899992899708986686445689999----9806
Q ss_pred HHHHC
Q ss_conf 98642
Q gi|254780971|r 214 FASLL 218 (219)
Q Consensus 214 f~~~~ 218 (219)
|.++|
T Consensus 525 F~~fi 529 (535)
T 3nva_A 525 YLGFI 529 (535)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999