Query gi|254780971|ref|YP_003065384.1| phosphoribosylformylglycinamidine synthase subunit I [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 219
No_of_seqs 117 out of 1998
Neff 5.5
Searched_HMMs 23785
Date Wed Jun 1 00:45:28 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780971.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t3t_A Phosphoribosylformylgly 100.0 0 0 496.3 21.8 214 2-217 1049-1298(1303)
2 3d54_D Phosphoribosylformylgly 100.0 3.2E-34 1.4E-38 238.2 16.3 206 1-218 3-208 (213)
3 1q7r_A Predicted amidotransfer 99.9 4.4E-23 1.8E-27 167.0 9.6 174 1-218 24-206 (219)
4 2iss_D Glutamine amidotransfer 99.9 4.9E-22 2E-26 160.3 10.1 175 1-219 21-205 (208)
5 2abw_A PDX2 protein, glutamina 99.8 8.3E-21 3.5E-25 152.5 9.5 179 1-201 4-201 (227)
6 1jvn_A Glutamine, bifunctional 99.8 4.9E-20 2.1E-24 147.6 11.9 193 2-219 6-213 (555)
7 1ka9_H Imidazole glycerol phos 99.8 9.2E-20 3.9E-24 145.8 12.0 181 1-218 3-194 (200)
8 2nv0_A Glutamine amidotransfer 99.8 7E-19 3E-23 140.1 11.6 174 1-218 2-184 (196)
9 1gpw_B Amidotransferase HISH; 99.8 5.9E-18 2.5E-22 134.3 13.0 180 1-218 1-194 (201)
10 2ywj_A Glutamine amidotransfer 99.8 1.3E-17 5.5E-22 132.0 12.8 178 1-218 1-180 (186)
11 2a9v_A GMP synthase; NP_394403 99.7 6.4E-16 2.7E-20 121.3 14.4 179 1-218 14-196 (212)
12 2ywd_A Glutamine amidotransfer 99.7 1.2E-15 4.8E-20 119.6 13.7 172 2-218 4-186 (191)
13 1wl8_A GMP synthase [glutamine 99.5 2.5E-13 1.1E-17 104.7 12.8 179 1-218 1-183 (189)
14 1qdl_B Protein (anthranilate s 99.5 1.2E-12 5.2E-17 100.2 14.7 173 15-219 15-193 (195)
15 1l9x_A Gamma-glutamyl hydrolas 99.5 8E-14 3.4E-18 107.8 6.8 191 3-206 33-251 (315)
16 2ywb_A GMP synthase [glutamine 99.4 2E-12 8.5E-17 98.9 10.8 176 3-218 2-181 (503)
17 2vxo_A GMP synthase [glutamine 99.4 4E-12 1.7E-16 97.0 10.9 178 2-218 31-211 (697)
18 3fij_A LIN1909 protein; 11172J 99.4 5.1E-12 2.1E-16 96.3 10.9 177 17-218 33-237 (254)
19 1gpm_A GMP synthetase, XMP ami 99.3 1.6E-11 6.8E-16 93.1 11.9 180 2-218 9-198 (525)
20 1o1y_A Conserved hypothetical 99.3 4.5E-11 1.9E-15 90.3 14.0 164 1-198 13-187 (239)
21 2vpi_A GMP synthase; guanine m 99.3 2.6E-11 1.1E-15 91.8 12.2 177 2-218 26-206 (218)
22 1i1q_B Anthranilate synthase c 99.2 8.7E-11 3.7E-15 88.4 10.9 166 15-219 14-187 (192)
23 2w7t_A CTP synthetase, putativ 99.2 1.8E-09 7.6E-14 80.0 17.5 174 25-218 39-251 (273)
24 2v4u_A CTP synthase 2; pyrimid 99.2 7.5E-10 3.1E-14 82.5 13.3 178 17-218 44-271 (289)
25 3m3p_A Glutamine amido transfe 99.1 9.9E-09 4.2E-13 75.3 15.8 169 1-199 3-179 (250)
26 1vco_A CTP synthetase; tetrame 99.1 7.6E-09 3.2E-13 76.0 14.8 178 17-218 319-540 (550)
27 3nva_A CTP synthase; rossman f 99.0 6.5E-09 2.7E-13 76.5 12.2 175 17-218 312-529 (535)
28 1s1m_A CTP synthase; CTP synth 99.0 8.3E-09 3.5E-13 75.8 12.1 177 17-218 308-533 (545)
29 1a9x_B Carbamoyl phosphate syn 99.0 2.9E-08 1.2E-12 72.3 13.8 164 15-218 202-370 (379)
30 3cne_A Putative protease I; st 98.7 5.4E-08 2.3E-12 70.6 8.9 98 2-101 4-126 (175)
31 1g2i_A Protease I; intracellul 98.7 5.4E-08 2.3E-12 70.6 8.6 93 1-101 1-115 (166)
32 2fex_A Conserved hypothetical 98.5 1.9E-07 8.1E-12 67.0 7.0 92 2-101 3-116 (188)
33 1oi4_A Hypothetical protein YH 98.5 3.8E-07 1.6E-11 65.1 8.3 91 2-100 25-139 (193)
34 2rk3_A Protein DJ-1; parkinson 98.5 4.7E-07 2E-11 64.6 8.6 92 2-100 5-120 (197)
35 2vrn_A Protease I, DR1199; cys 98.5 4.6E-07 1.9E-11 64.7 8.2 93 2-101 11-130 (190)
36 3fse_A Two-domain protein cont 98.5 5.7E-07 2.4E-11 64.0 8.6 93 1-101 11-127 (365)
37 3noq_A THIJ/PFPI family protei 98.4 1E-06 4.3E-11 62.4 8.4 94 1-101 6-119 (231)
38 2ab0_A YAJL; DJ-1/THIJ superfa 98.4 1.6E-06 6.9E-11 61.1 8.4 93 2-101 4-122 (205)
39 1sy7_A Catalase 1; heme oxidat 98.3 2.4E-06 1E-10 60.1 8.0 94 2-101 536-650 (715)
40 2h2w_A Homoserine O-succinyltr 98.3 4E-06 1.7E-10 58.6 8.9 137 38-200 108-250 (312)
41 3mgk_A Intracellular protease/ 98.2 2.6E-06 1.1E-10 59.9 7.2 94 1-101 5-119 (211)
42 3efe_A THIJ/PFPI family protei 98.2 2.2E-06 9.2E-11 60.3 6.8 92 2-101 7-127 (212)
43 1vhq_A Enhancing lycopene bios 98.2 6.2E-06 2.6E-10 57.4 8.4 96 2-99 8-153 (232)
44 3bhn_A THIJ/PFPI domain protei 98.2 7.8E-06 3.3E-10 56.8 8.2 93 2-101 22-134 (236)
45 3er6_A Putative transcriptiona 98.2 6.9E-06 2.9E-10 57.1 7.8 97 1-101 9-130 (209)
46 3ewn_A THIJ/PFPI family protei 98.2 6.4E-06 2.7E-10 57.3 7.5 94 2-101 25-139 (253)
47 2vdj_A Homoserine O-succinyltr 98.1 1.5E-05 6.3E-10 55.0 8.3 173 1-200 36-239 (301)
48 3f5d_A Protein YDEA; unknow pr 98.0 6.7E-06 2.8E-10 57.2 5.8 91 2-101 5-115 (206)
49 3gra_A Transcriptional regulat 97.8 5.9E-05 2.5E-09 51.2 7.0 93 1-101 6-123 (202)
50 3l3b_A ES1 family protein; ssg 97.8 9.8E-05 4.1E-09 49.8 8.0 99 1-101 24-174 (242)
51 3ot1_A 4-methyl-5(B-hydroxyeth 97.7 0.00022 9.2E-09 47.5 8.7 93 2-101 11-127 (208)
52 1u9c_A APC35852; structural ge 97.6 4.8E-05 2E-09 51.7 4.7 58 38-100 86-143 (224)
53 3kkl_A Probable chaperone prot 97.3 0.00028 1.2E-08 46.9 5.1 56 37-98 94-150 (244)
54 1rw7_A YDR533CP; alpha-beta sa 97.2 0.00032 1.3E-08 46.5 4.7 56 38-98 95-150 (243)
55 3n7t_A Macrophage binding prot 97.0 0.0011 4.5E-08 43.1 5.5 56 38-99 102-158 (247)
56 1n57_A Chaperone HSP31, protei 96.5 0.0029 1.2E-07 40.4 4.8 52 39-95 143-194 (291)
57 2iuf_A Catalase; oxidoreductas 94.8 0.062 2.6E-06 31.8 6.2 98 1-99 530-652 (688)
58 3l4e_A Uncharacterized peptida 94.7 0.1 4.2E-06 30.5 6.9 89 2-95 29-129 (206)
59 1p80_A Catalase HPII; beta bar 94.4 0.3 1.3E-05 27.5 8.8 89 2-98 602-711 (753)
60 3en0_A Cyanophycinase; serine 92.3 0.46 1.9E-05 26.3 6.9 89 2-94 58-160 (291)
61 1fy2_A Aspartyl dipeptidase; s 91.5 0.27 1.1E-05 27.8 5.0 89 2-95 33-129 (229)
62 1yt5_A Inorganic polyphosphate 88.2 1.3 5.5E-05 23.4 6.3 71 1-88 1-73 (258)
63 1z0s_A Probable inorganic poly 87.7 1.5 6.5E-05 22.9 7.4 71 1-88 30-100 (278)
64 2ov6_A V-type ATP synthase sub 71.4 3.1 0.00013 21.0 3.4 40 1-47 1-50 (101)
65 1vjt_A Alpha-glucosidase; TM07 69.5 3 0.00013 21.1 3.0 25 68-94 177-201 (483)
66 3hy3_A 5-formyltetrahydrofolat 66.2 5.4 0.00023 19.5 3.8 53 41-94 128-182 (203)
67 1u0t_A Inorganic polyphosphate 63.3 6.8 0.00028 18.8 3.8 73 2-88 6-108 (307)
68 1eiw_A Hypothetical protein MT 62.8 6.8 0.00028 18.8 3.7 68 5-87 7-75 (111)
69 2qai_A V-type ATP synthase sub 61.0 7 0.00029 18.8 3.5 24 1-31 1-24 (111)
70 2zy4_A L-aspartate beta-decarb 60.8 8.9 0.00037 18.1 4.4 54 133-186 216-276 (546)
71 3f6t_A Aspartate aminotransfer 57.3 8.7 0.00036 18.1 3.5 58 134-191 216-280 (533)
72 2o0r_A RV0858C (N-succinyldiam 53.4 12 0.00049 17.3 4.3 59 133-191 132-196 (411)
73 2d00_A V-type ATP synthase sub 52.9 6.7 0.00028 18.8 2.4 28 1-35 4-31 (109)
74 2r47_A Uncharacterized protein 51.5 3.8 0.00016 20.5 0.9 55 39-99 82-136 (157)
75 1j32_A Aspartate aminotransfer 50.1 13 0.00055 17.0 3.5 46 133-179 136-181 (388)
76 1t0b_A THUA-like protein; treh 49.6 13 0.00057 16.9 10.4 102 18-132 38-148 (252)
77 1ydm_A Hypothetical protein YQ 48.7 12 0.00052 17.2 3.2 49 39-94 113-163 (187)
78 1sbq_A H91_ORF164, 5,10-methen 45.9 14 0.00059 16.8 3.1 48 39-91 121-170 (189)
79 1ydg_A Trp repressor binding p 45.3 16 0.00066 16.5 7.3 36 1-36 7-45 (211)
80 2zuv_A Lacto-N-biose phosphory 38.9 20 0.00082 15.9 7.1 85 1-87 439-544 (759)
81 1ug8_A Poly(A)-specific ribonu 38.4 9.4 0.00039 17.9 1.2 26 67-92 15-43 (87)
82 2jcb_A 5-formyltetrahydrofolat 38.4 20 0.00084 15.8 3.0 12 82-93 162-173 (200)
83 1gd9_A Aspartate aminotransfer 37.7 20 0.00086 15.8 3.5 46 133-179 133-178 (389)
84 1d2f_A MALY protein; aminotran 36.4 21 0.0009 15.6 4.6 60 132-191 132-198 (390)
85 2an1_A Putative kinase; struct 36.1 17 0.0007 16.3 2.2 72 2-88 7-96 (292)
86 3cni_A Putative ABC type-2 tra 35.2 22 0.00094 15.5 4.2 49 1-52 11-67 (156)
87 3nra_A Aspartate aminotransfer 34.2 23 0.00098 15.4 2.8 47 133-179 148-197 (407)
88 1b5p_A Protein (aspartate amin 30.1 24 0.001 15.3 2.2 55 133-188 137-197 (385)
89 3ej6_A Catalase-3; heme, hydro 28.3 29 0.0012 14.8 7.1 25 72-96 623-647 (688)
90 2fts_A Gephyrin; gephyrin, neu 27.6 30 0.0013 14.7 4.0 42 15-56 210-262 (419)
91 2z2v_A Hypothetical protein PH 26.1 32 0.0013 14.5 3.4 87 1-100 17-137 (365)
92 1sou_A 5,10-methenyltetrahydro 25.4 33 0.0014 14.4 3.6 13 81-93 146-158 (194)
93 3d6k_A Putative aminotransfera 25.0 33 0.0014 14.4 4.3 62 126-192 147-216 (422)
94 3g0t_A Putative aminotransfera 24.0 35 0.0015 14.3 2.4 58 133-191 155-218 (437)
95 1mkz_A Molybdenum cofactor bio 23.6 35 0.0015 14.2 5.6 56 1-57 11-85 (172)
96 2him_A L-asparaginase 1; hydro 23.5 34 0.0014 14.4 2.0 22 142-163 262-286 (358)
97 2hox_A ALLIIN lyase 1; cystein 22.9 37 0.0015 14.1 2.3 33 146-178 181-213 (427)
98 1hzd_A AUH, AU-binding protein 22.7 37 0.0016 14.1 3.4 49 40-88 55-114 (272)
99 2i4r_A V-type ATP synthase sub 22.3 38 0.0016 14.1 2.2 24 2-32 11-34 (102)
100 1uz5_A MOEA protein, 402AA lon 22.2 38 0.0016 14.1 5.3 42 15-56 209-261 (402)
101 1xi9_A Putative transaminase; 21.7 39 0.0016 14.0 4.4 46 133-179 147-192 (406)
No 1
>1t3t_A Phosphoribosylformylglycinamidine synthase; PURL, FGAM synthetase, PURS, PURQ, formyl glycinamide, ligase; HET: CYG ADP; 1.90A {Salmonella typhimurium} SCOP: a.5.10.1 c.23.16.1 d.284.1.2 d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1
Probab=100.00 E-value=0 Score=496.29 Aligned_cols=214 Identities=30% Similarity=0.486 Sum_probs=193.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCEEEECCCCCCCCCCCHHHHHH-----HHHHHHH
Q ss_conf 689984497064799999999854996399821546-----445647899728734543114067752-----0021212
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDT-----DIPDVDLIVIPGGFSYGDYLRCGAIAA-----RTPVMQA 71 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~-----~l~~~d~lvipGGFSygD~l~aG~i~~-----~~~~~~~ 71 (219)
||||+||||+||++||++||++ +||++++|+++|. .|+++++|++||||||||++++++.|+ +..+.++
T Consensus 1049 kVaIlr~pG~N~~~ema~AF~~-AGf~~~dV~m~dl~~~~~~L~~f~gl~~~GGFS~gD~l~~~~gwa~sil~N~~~~~a 1127 (1303)
T 1t3t_A 1049 KVAVLREQGVNSHVEMAAAFHR-AGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDE 1127 (1303)
T ss_dssp EEEEEECTTBCCHHHHHHHHHH-TTCEEEEEEHHHHHHTSCCGGGCSEEEECCBCGGGGTTSTTHHHHHHHHHSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH-CCCCEEEEEEEECCCCCCCHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHCHHHHHH
T ss_conf 6999817997987999999998-499648998643666766777882999927888766787689999999709999999
Q ss_pred HHHHHHC-CCEEEEECCCHHHHEECCC-HHH-----HHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 2332205-9717860640310100000-101-----10124433245422576752523577641379968998620133
Q gi|254780971|r 72 IKKKAQQ-GIKVMGICNGFQILVELNL-LPG-----ILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHD 144 (219)
Q Consensus 72 i~~~~~~-g~~vLGICNGfQiL~elGL-lPg-----~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgE 144 (219)
+.+|.++ ++++||||||||+|++||+ +|| +|++|+|+||||||++++|.+++|+|+++++ |+++++||||||
T Consensus 1128 ~~~fl~r~DtfsLGICNGcQ~L~~Lg~l~pg~e~~Ptl~~N~s~r~eSr~~~v~I~~s~S~~l~~m~-G~~~pi~vsHGE 1206 (1303)
T 1t3t_A 1128 FETFFHRPQTLALGVCNGCQMMSNLRELIPGSELWPRFVRNHSDRFEARFSLVEVTQSPSLLLQGMV-GSQMPIAVSHGE 1206 (1303)
T ss_dssp HHHHHHSSSCEEEEETHHHHHHHTTGGGSTTCTTCCEEECCTTSSCEEEEEEEEECCCSCGGGTTCT-TCEEEEEEEESS
T ss_pred HHHHHCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCCHHHCCCC-CCEEEEEEECCC
T ss_conf 9999719993499977899999981897888788965762366888998788898998976667688-998458877276
Q ss_pred EEE-EECHHHHHHHHHCCEEEEECCC---------CCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCC------
Q ss_conf 023-3086774115422503653168---------888898811266888699989998488434322100677------
Q gi|254780971|r 145 GNY-FIDAKGLAEIEKNNQIVFRYAS---------GTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGI------ 208 (219)
Q Consensus 145 Grf-~~~~~~l~~l~~~~~i~~~Y~d---------~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~------ 208 (219)
||| +.+++.+++|.+++||++||+| |.|||||.++||||||+|||||||||||||++.+|.++.
T Consensus 1207 Grf~~~~~~~~~~L~~~gqia~~Yvd~~g~~t~~yP~NPNGS~~~IaGi~S~DGR~l~~M~HpER~~~~~q~~~~p~~~~ 1286 (1303)
T 1t3t_A 1207 GRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTENGRVTIMMPHPERVFRTVANSWHPENWG 1286 (1303)
T ss_dssp CEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTTSSSCCGGGEEEEECTTSSEEEESSBGGGSSBGGGCSSCCTTCC
T ss_pred CCEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHCEEEEECCCCCEEEECCCHHHCCCCCCCCCCCCCCC
T ss_conf 86472898999999987977899847999832468879888711125887798888888179677365100474886457
Q ss_pred -CH--HHHHHHH
Q ss_conf -62--8999864
Q gi|254780971|r 209 -DG--RGLFASL 217 (219)
Q Consensus 209 -dG--~~~f~~~ 217 (219)
++ +++|+|+
T Consensus 1287 ~~sPW~~~F~nA 1298 (1303)
T 1t3t_A 1287 EDSPWMRIFRNA 1298 (1303)
T ss_dssp SBCTTHHHHHHH
T ss_pred CCCHHHHHHHHH
T ss_conf 889899999999
No 2
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=100.00 E-value=3.2e-34 Score=238.16 Aligned_cols=206 Identities=47% Similarity=0.796 Sum_probs=175.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
+|||||+|||||||||+++||++ .|.++.++ ..+.+|.++|+|||||+.||++...+..-.......+.+.+..+.++
T Consensus 3 ~ki~ii~~~G~n~~~~v~~Al~~-lG~~~~i~-~~~~~l~~~d~lILPGvGsf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (213)
T 3d54_D 3 PRACVVVYPGSNCDRDAYHALEI-NGFEPSYV-GLDDKLDDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGK 80 (213)
T ss_dssp CEEEEECCTTEEEHHHHHHHHHT-TTCEEEEE-CTTCCCSSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTC
T ss_pred CEEEEEECCCCCHHHHHHHHHHH-CCCEEEEE-ECHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 64999924971869999999998-69908998-47665755786885798871899998776543367788887403686
Q ss_pred EEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHHHC
Q ss_conf 17860640310100000101101244332454225767525235776413799689986201330233086774115422
Q gi|254780971|r 81 KVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKN 160 (219)
Q Consensus 81 ~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~ 160 (219)
++||||.|+|++.+++...+.+..+...+.......+......+++............+..+.++.++... .
T Consensus 81 ~ilgic~g~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 152 (213)
T 3d54_D 81 LIMGICNGFQILIEMGLLKGALLQNSSGKFICKWVDLIVENNDTPFTNAFEKGEKIRIPIAHGFGRYVKID--------D 152 (213)
T ss_dssp EEEECHHHHHHHHHHTSSCSEEECCSSSSCBCCEEEEEECCCSSTTSTTSCTTCEEEEECCBSSCEEECSS--------C
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------C
T ss_conf 44276414145410256668644368874043123341147888542245357533445566545230233--------1
Q ss_pred CEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 5036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 161 NQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 161 ~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
..+...|.. +++.+...+++++++++|++|+|+||||+...+.++.+|++||+|++
T Consensus 153 ~~~~~~~~~--~~~~~~~~~~~~~~~~~ni~G~QFHPEKS~~~~~~g~~Gl~ll~nf~ 208 (213)
T 3d54_D 153 VNVVLRYVK--DVNGSDERIAGVLNESGNVFGLMPHPERAVEELIGGEDGKKVFQSIL 208 (213)
T ss_dssp CEEEEEESS--CSSCCGGGEEEEECSSSCEEEECSCSTTTTSTTTTCSTTSHHHHHHH
T ss_pred CEEEEEEEE--CCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 204556664--03456786699997899999991898356767678945899999999
No 3
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.89 E-value=4.4e-23 Score=167.04 Aligned_cols=174 Identities=24% Similarity=0.353 Sum_probs=109.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
||++||.++|. .+++++|+++ .|.++.++ .++.+|.++|+||||||++ ++ +...+....+.+.+++++++|+
T Consensus 24 mkigvl~~~Gn--~~s~~~AL~~-lG~~~~iv-~~~~~l~~~D~lILPGG~~-~~---~~~~l~~~~l~~~I~~~~~~gk 95 (219)
T 1q7r_A 24 MKIGVLGLQGA--VREHVRAIEA-CGAEAVIV-KKSEQLEGLDGLVLPGGES-TT---MRRLIDRYGLMEPLKQFAAAGK 95 (219)
T ss_dssp CEEEEESCGGG--CHHHHHHHHH-TTCEEEEE-CSGGGGTTCSEEEECCCCH-HH---HHHHHHHTTCHHHHHHHHHTTC
T ss_pred CEEEEEECCCC--HHHHHHHHHH-CCCCEEEE-CCHHHHHCCCEEEECCCCH-HH---HHHHHHHCCCHHHHHHHHHCCC
T ss_conf 77999965883--9999999998-79969998-9989982499999999987-99---9998657873899999997799
Q ss_pred EEEEECCCHHHHEEC---------CCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECH
Q ss_conf 178606403101000---------00101101244332454225767525235776413799689986201330233086
Q gi|254780971|r 81 KVMGICNGFQILVEL---------NLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDA 151 (219)
Q Consensus 81 ~vLGICNGfQiL~el---------GLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~ 151 (219)
|+||||.|+|+|.+. |++++...+....+.. ... ...+...++. .....|+...
T Consensus 96 PiLGIClGmQlL~~~~~~~~~~~lg~~~~~v~~~~~~~~~-----~~~--~~~~~~~~~~----------~~~~~~~~~~ 158 (219)
T 1q7r_A 96 PMFGTCAGLILLAKRIVGYDEPHLGLMDITVERNSFGRQR-----ESF--EAELSIKGVG----------DGFVGVFIRA 158 (219)
T ss_dssp CEEEETTHHHHHEEEEESSCCCCCCCEEEEEECHHHHCCC-----CCE--EEEEEETTTE----------EEEEEEESSC
T ss_pred CEEEECCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC-----CCC--CCCCCCCCCC----------CCCCEEEEEE
T ss_conf 7999940066641103221114467632136650443322-----221--1333333345----------7874599963
Q ss_pred HHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 7741154225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 152 KGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 152 ~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
.....+.+.-.+..+|.+ .++++ .+||++|+|+|||++- |.+|+++++
T Consensus 159 ~~~~~~~~~~~~~a~~~~---------~~~av--~~~ni~G~QFHPEkS~--------~~~il~nFl 206 (219)
T 1q7r_A 159 PHIVEAGDGVDVLATYND---------RIVAA--RQGQFLGCSFHPELTD--------DHRLMQYFL 206 (219)
T ss_dssp CEEEEECTTCEEEEEETT---------EEEEE--EETTEEEESSCGGGSS--------CCHHHHHHH
T ss_pred EEECCCCCCCEEEEEECC---------EEEEE--EECCEEEEECCCEECC--------CHHHHHHHH
T ss_conf 364137998389999899---------99999--9699999975986178--------808999999
No 4
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.87 E-value=4.9e-22 Score=160.34 Aligned_cols=175 Identities=23% Similarity=0.358 Sum_probs=112.9
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
|||+||.++| -.++.++||++ .|.++.++ .++.+|+++|+||||||++ ++ +...+....+.+.+++++++++
T Consensus 21 mkIgVi~~~G--n~~s~~~aL~~-lG~~~~iv-~~~~~l~~~D~lILPGG~~-~~---~~~~l~~~~~~~~i~~~~~~~k 92 (208)
T 2iss_D 21 MKIGVLGVQG--DVREHVEALHK-LGVETLIV-KLPEQLDMVDGLILPGGES-TT---MIRILKEMDMDEKLVERINNGL 92 (208)
T ss_dssp CEEEEECSSS--CHHHHHHHHHH-TTCEEEEE-CSGGGGGGCSEEEECSSCH-HH---HHHHHHHTTCHHHHHHHHHTTC
T ss_pred CEEEEEECCC--CHHHHHHHHHH-CCCCEEEE-CCHHHHHCCCEEEECCCCH-HH---HHHHHHHCCCHHHHHHHHHCCC
T ss_conf 7899995688--79999999998-89989998-9989982599999999998-99---9999998698899999998699
Q ss_pred EEEEECCCHHHHEE---------CCCHHHHHCCCC-CCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEEC
Q ss_conf 17860640310100---------000101101244-33245422576752523577641379968998620133023308
Q gi|254780971|r 81 KVMGICNGFQILVE---------LNLLPGILMRNC-SLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFID 150 (219)
Q Consensus 81 ~vLGICNGfQiL~e---------lGLlPg~l~~N~-s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~ 150 (219)
|+||||.|+|+|.+ +|++++...+.. .......|..+++.. ...+. +...-.|.
T Consensus 93 PiLGIClG~QlL~~~~e~~~~~glg~~~~~v~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~------- 156 (208)
T 2iss_D 93 PVFATCAGVILLAKRIKNYSQEKLGVLDITVERNAYGRQVESFETFVEIPA--------VGKDP-FRAIFIRA------- 156 (208)
T ss_dssp CEEEETHHHHHHEEEEC---CCCCCCEEEEEETTTTCSGGGCEEEEECCGG--------GCSSC-EEEEESSC-------
T ss_pred CEEEECCCHHHHEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC--------CCCCC-EEEEEEEC-------
T ss_conf 889987241323000368831124642121110354554566545543554--------67775-65999853-------
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHCC
Q ss_conf 677411542250365316888889881126688869998999848843432210067762899986429
Q gi|254780971|r 151 AKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLLT 219 (219)
Q Consensus 151 ~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~s 219 (219)
.....+.++.++..+|.+ ++|+|. ++|++|.++|||++ +|.++++|++.
T Consensus 157 -~~~~~~~~~~~i~a~~~~---------~~~~v~--~~ni~G~QFHPEkS--------~g~~il~nFl~ 205 (208)
T 2iss_D 157 -PRIVETGKNVEILATYDY---------DPVLVK--EGNILACTFHPELT--------DDLRLHRYFLE 205 (208)
T ss_dssp -CEEEEECSSCEEEEEETT---------EEEEEE--ETTEEEESSCGGGS--------SCCHHHHHHHT
T ss_pred -CEEECCCCCCEEEEEECC---------EEEEEE--ECCEEEEEECCEEC--------CCHHHHHHHHH
T ss_conf -253115898589999999---------999999--89999998597225--------88599999999
No 5
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1
Probab=99.84 E-value=8.3e-21 Score=152.46 Aligned_cols=179 Identities=18% Similarity=0.153 Sum_probs=103.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEE-EECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HC
Q ss_conf 9689984497064799999999854996399-821546445647899728734543114067752002121223322-05
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPIL-VWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKA-QQ 78 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~-v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~-~~ 78 (219)
|||+||.+||.. +|.++||++++...+.+ ++.++.+|.++|+||||||.||++.. .....++.+.+.+++++ ++
T Consensus 4 ~kigvl~~~Gn~--~~~~~al~~lg~~~~~v~~v~~~~~l~~~d~lILPG~gs~~~~~--~~~~~~~~~~~~i~~~~~~~ 79 (227)
T 2abw_A 4 ITIGVLSLQGDF--EPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRR--CCAYENDTLYNALVHFIHVL 79 (227)
T ss_dssp EEEEEECTTSCC--HHHHHHHHTTCCTTEEEEEECSHHHHHTCSEEEECCSCHHHHHH--HTTHHHHHHHHHHHHHHHTS
T ss_pred CEEEEEECCCCH--HHHHHHHHHHCCCCCEEEEECCHHHHHCCCEEEECCCCHHHHHH--HHHHHHCCCHHHHHHHHHHC
T ss_conf 789999558869--99999999837898479994998998279999998996599999--99987667778999999853
Q ss_pred CCEEEEECCCHHHHEECCCH----------------HHHHCCCCCC-CEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEE
Q ss_conf 97178606403101000001----------------0110124433-245422576752523577641379968998620
Q gi|254780971|r 79 GIKVMGICNGFQILVELNLL----------------PGILMRNCSL-KFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVA 141 (219)
Q Consensus 79 g~~vLGICNGfQiL~elGLl----------------Pg~l~~N~s~-rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~pia 141 (219)
++|+||||.|||+|.+..-- +.....+..+ .....|..+.+......|.... -..++.
T Consensus 80 ~~PilGIClG~QlL~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y 154 (227)
T 2abw_A 80 KKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSSAFKKDL-----TAACIR 154 (227)
T ss_dssp CCCEEEETHHHHHTEEEEECCCSCCTTGGGSCCCCEEEEEECCC----CCEEEEECEECCCCTTCCTTC-----EEEEES
T ss_pred CCCEEEECHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC-----CCEEEE
T ss_conf 991798505688998873587443455761022202442111356887767565667223574447887-----751899
Q ss_pred CCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHC
Q ss_conf 133023308677411542250365316888889881126688869998999848843432
Q gi|254780971|r 142 HHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENII 201 (219)
Q Consensus 142 HgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~ 201 (219)
|-. .| +.+.++-.+..++.+ . .++..-||+|. +||++|+|+|||++-
T Consensus 155 ~~h-s~-------~~~~~~~~vla~~~~--~-~~~~~~iaav~--~~Ni~G~QFHPE~s~ 201 (227)
T 2abw_A 155 APY-IR-------EILSDEVKVLATFSH--E-SYGPNIIAAVE--QNNCLGTVFHPELLP 201 (227)
T ss_dssp CCE-EE-------EECCTTCEEEEEEEE--T-TTEEEEEEEEE--ETTEEEESSCGGGSS
T ss_pred EEE-EE-------EECCCCCEEEEEECC--C-CCCCEEEEEEE--CCCEEEEECCCEECC
T ss_conf 888-88-------951788569999425--3-68950799997--499999985886029
No 6
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A substrate tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.83 E-value=4.9e-20 Score=147.55 Aligned_cols=193 Identities=20% Similarity=0.260 Sum_probs=123.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEEEECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6899844970647999999998549963998215-46445647899728-734543114067752002121223322059
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQS-DTDIPDVDLIVIPG-GFSYGDYLRCGAIAARTPVMQAIKKKAQQG 79 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~-~~~l~~~d~lvipG-GFSygD~l~aG~i~~~~~~~~~i~~~~~~g 79 (219)
+|+||-+.-.|- ....+||++ .+.++.++... +.++.++|+||||| | ||++.. .-.....+.+.++++.+.+
T Consensus 6 ~I~IIDyg~GNi-~Sv~~aL~~-lg~~~~ii~~~~~~~i~~~d~IILPGVG-sF~~~m---~~L~~~~l~~~I~~~~~~~ 79 (555)
T 1jvn_A 6 VVHVIDVESGNL-QSLTNAIEH-LGYEVQLVKSPKDFNISGTSRLILPGVG-NYGHFV---DNLFNRGFEKPIREYIESG 79 (555)
T ss_dssp EEEEECCSCSCC-HHHHHHHHH-TTCEEEEESSGGGCCSTTCSCEEEEECS-CHHHHH---HHHHHTTCHHHHHHHHHTT
T ss_pred EEEEEECCCCHH-HHHHHHHHH-CCCCEEEEECCCHHHHHCCCEEEECCCC-CHHHHH---HHHHHCCCHHHHHHHHHCC
T ss_conf 899997998689-999999998-6997699968786688459989999999-779999---9999879699999999869
Q ss_pred CEEEEECCCHHHHEE----------CCCHHHHHCCCCCCCE---EEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEE
Q ss_conf 717860640310100----------0001011012443324---542257675252357764137996899862013302
Q gi|254780971|r 80 IKVMGICNGFQILVE----------LNLLPGILMRNCSLKF---VCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGN 146 (219)
Q Consensus 80 ~~vLGICNGfQiL~e----------lGLlPg~l~~N~s~rf---~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGr 146 (219)
+|+||||.|+|+|.+ |||+||...+.....+ .--|..+. .++ ..+.++.... .++..|...-
T Consensus 80 ~PILGICLGmQiL~~~S~E~~~~~GLgli~G~V~k~~~~~~k~phiGwn~i~--~~~-~l~~~~~~~~--~~yf~HSy~v 154 (555)
T 1jvn_A 80 KPIMGIXVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEKPVPEIGWNSCI--PSE-NLFFGLDPYK--RYYFVHSFAA 154 (555)
T ss_dssp CCEEEEEHHHHTTEEEETTBTTCCCCCSEEEEEEECCTTTSCSSEEEEECCC--CCT-TCCTTCCTTS--CEEEEESEEC
T ss_pred CCEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEECCEEC--CCC-CCCCCCCCCC--EEEEECEEEE
T ss_conf 9499958979984537752788787564838999878999986612022002--577-4123788777--2999674899
Q ss_pred EEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHCC
Q ss_conf 3308677411542250365316888889881126688869998999848843432210067762899986429
Q gi|254780971|r 147 YFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLLT 219 (219)
Q Consensus 147 f~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~s 219 (219)
+.+++..+.+.....+.....+ |...-+|+|. .+|++|+++|||++. ..|+.|++|++.
T Consensus 155 -~~~~~~~~~~~~~~~~ia~t~~-----g~~~iiaaV~--k~NI~GvQFHPEkS~------~~G~~ll~nFlk 213 (555)
T 1jvn_A 155 -ILNSEKKKNLENDGWKIAKAKY-----GSEEFIAAVN--KNNIFATQFHPEKSG------KAGLNVIENFLK 213 (555)
T ss_dssp -BCCHHHHHHHHHTTCEEEEEEE-----TTEEEEEEEE--ETTEEEESSBGGGSH------HHHHHHHHHHHT
T ss_pred -EECCCCCCCCCCCCCEEEEEEE-----CCEEEEEEEE--CCCEEEEECCCCCCC------HHHHHHHHHHHH
T ss_conf -9655102456777858999972-----9967999997--399999989998316------779999999982
No 7
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.82 E-value=9.2e-20 Score=145.79 Aligned_cols=181 Identities=22% Similarity=0.265 Sum_probs=120.9
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
||++||.+...|-+. .++||++ .+.++.++ .++.++.++|+||+||+.|+++.. .......+.+.++++.++++
T Consensus 3 mKi~IID~g~gN~~S-v~~~l~~-lg~~~~ii-~~~~~l~~~D~iIlPG~G~~~~~~---~~l~~~~~~~~i~~~~~~~~ 76 (200)
T 1ka9_H 3 MKALLIDYGSGNLRS-AAKALEA-AGFSVAVA-QDPKAHEEADLLVLPGQGHFGQVM---RAFQESGFVERVRRHLERGL 76 (200)
T ss_dssp CEEEEECSSCSCHHH-HHHHHHH-TTCEEEEE-SSTTSCSSCSEEEECCCSCHHHHH---HTTSSSCTHHHHHHHHHTTC
T ss_pred CEEEEEECCCCHHHH-HHHHHHH-CCCCEEEE-CCHHHHHHCCEEEECCCCCHHHHH---HHHHHCCCHHHHHHHHHCCC
T ss_conf 779999489858999-9999998-79989998-899998537989995987589999---76654592999999987599
Q ss_pred EEEEECCCHHHHEE----------CCCHHHHHCCCCCCC-EEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEE
Q ss_conf 17860640310100----------000101101244332-4542257675252357764137996899862013302330
Q gi|254780971|r 81 KVMGICNGFQILVE----------LNLLPGILMRNCSLK-FVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFI 149 (219)
Q Consensus 81 ~vLGICNGfQiL~e----------lGLlPg~l~~N~s~r-f~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~ 149 (219)
|+||||.|+|+|++ ++++++...++...+ -...|..+...+... .+.. ...+..|. |+.
T Consensus 77 PILGIClG~QlL~~~s~e~~~~~gl~~~~g~v~~~~~~~~~~~g~~~i~~~~~~~----~~~~---~~~~~~hs---~~~ 146 (200)
T 1ka9_H 77 PFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVPQMGWNALEFGGAFA----PLTG---RHFYFANS---YYG 146 (200)
T ss_dssp CEEECTHHHHTTSSEETTSTTCCCCCSSSSEEEECCSSSSSEEEEEECEECGGGG----GGTT---CEEEEEES---EEC
T ss_pred CEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCC----CCCC---CCEEEEEE---EEC
T ss_conf 3899829999987647205665772582259952566524331320589730333----3467---61489887---871
Q ss_pred CHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 867741154225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 150 DAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 150 ~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+. ..+.-+...|.+ ..=+|++- .+|++|+++|||++- .+|++|.+|++
T Consensus 147 ~~------~~~~i~~~~~~~-------~~~~a~v~--k~Ni~GvQFHPEkS~------~~G~~lL~~f~ 194 (200)
T 1ka9_H 147 PL------TPYSLGKGEYEG-------TPFTALLA--KENLLAPQFHPEKSG------KAGLAFLALAR 194 (200)
T ss_dssp CC------CTTCCEEEEETT-------EEEEEEEE--CSSEEEESSCTTSSH------HHHHHHHHHHH
T ss_pred CC------CCCCEEEEEECC-------EEEEEEEE--ECCEEEEECCCCCCC------HHHHHHHHHHH
T ss_conf 56------865205899899-------99999999--499999957984257------86999999999
No 8
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.79 E-value=7e-19 Score=140.14 Aligned_cols=174 Identities=20% Similarity=0.279 Sum_probs=106.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
|||+||.+||+. +|..+|+++ .|.++.++. ++.+|.++|+||||||.|+. +..........+.++++.++|+
T Consensus 2 ~kIGvl~~~Gn~--~s~~~al~~-~g~~~~~i~-~~~~l~~~d~lIlPGg~~~~----~~~~~~~~~~~~~i~~~~~~g~ 73 (196)
T 2nv0_A 2 LTIGVLGLQGAV--REHIHAIEA-CGAAGLVVK-RPEQLNEVDGLILPGGESTT----MRRLIDTYQFMEPLREFAAQGK 73 (196)
T ss_dssp CEEEEECSSSCC--HHHHHHHHH-TTCEEEEEC-SGGGGGGCSEEEECCSCHHH----HHHHHHHTTCHHHHHHHHHTTC
T ss_pred CEEEEEECCCCH--HHHHHHHHH-CCCCEEEEC-CHHHHHCCCEEEECCCCCHH----HHHHHHHCCCHHHHHHHHHCCC
T ss_conf 499999458829--999999998-899299999-98998259989989960078----8887543682899999996499
Q ss_pred EEEEECCCHHHHEEC---------CCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECH
Q ss_conf 178606403101000---------00101101244332454225767525235776413799689986201330233086
Q gi|254780971|r 81 KVMGICNGFQILVEL---------NLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDA 151 (219)
Q Consensus 81 ~vLGICNGfQiL~el---------GLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~ 151 (219)
|+||||.|+|+|.+. |++++....+. .|..+... ..+..+.+.. .....+-.|+.--...
T Consensus 74 pilGIClG~Qll~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~--~~~~~~~~h~~~~~~~-- 142 (196)
T 2nv0_A 74 PMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNS------FGRQVDSF-EADLTIKGLD--EPFTGVFIRAPHILEA-- 142 (196)
T ss_dssp CEEEETHHHHHHSBCCC----CCCCCSCEEEECCC------SCTTTSEE-EEEECCTTCS--SCEEEEEESCCEEEEE--
T ss_pred CEEEECHHHHHHHHCCCCCCCCCCCCCCCEEECCC------CCCCCCCC-CCCEEECCCC--CCCEEEEEEEEEEEEC--
T ss_conf 88998011233430146644333452213031135------54322322-2200203688--8851899730178646--
Q ss_pred HHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 7741154225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 152 KGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 152 ~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
.++-.++.+|.+ .|+++. .+|++|.++|||++- +.+++++++
T Consensus 143 ------~~~~~~~~~~~~---------~~~av~--~~ni~G~QFHPEkS~--------~~~il~~Fl 184 (196)
T 2nv0_A 143 ------GENVEVLSEHNG---------RIVAAK--QGQFLGCSFHPELTE--------DHRVTQLFV 184 (196)
T ss_dssp ------CTTCEEEEEETT---------EEEEEE--ETTEEEESSCTTSSS--------CCHHHHHHH
T ss_pred ------CCCEEEEEEECC---------CEEEEE--ECCEEEEEECCCCCC--------CCHHHHHHH
T ss_conf ------886289874088---------289999--799999982850049--------827999999
No 9
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A
Probab=99.77 E-value=5.9e-18 Score=134.26 Aligned_cols=180 Identities=19% Similarity=0.264 Sum_probs=102.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCC--EEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9689984497064799999999854996--39982154644564789972873454311406775200212122332205
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQS--PILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQ 78 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~--~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~ 78 (219)
|||+||.+...|.+ ...+|+++++... ..+.+.++.++.++|+|||||..||++.. .......+.+.+++++++
T Consensus 1 MkI~IiDyg~gN~~-si~~~l~~~g~~~~~~~~~~~~~~~~~~~D~iIlPG~G~~~~~~---~~l~~~~l~~~I~~~~~~ 76 (201)
T 1gpw_B 1 MRIGIISVGPGNIM-NLYRGVKRASENFEDVSIELVESPRNDLYDLLFIPGVGHFGEGM---RRLRENDLIDFVRKHVED 76 (201)
T ss_dssp CEEEEECCSSSCCH-HHHHHHHHHSTTBSSCEEEEECSCCSSCCSEEEECCCSCSHHHH---HHHHHTTCHHHHHHHHHT
T ss_pred CEEEEEECCCCHHH-HHHHHHHHHCCCCCCCEEEEECCHHHCCCCEEEECCCCCHHHHH---HHHHHCCCHHHHHHHHHC
T ss_conf 98999917985899-99999998562045323697077466028979998987589999---996565878899999976
Q ss_pred CCEEEEECCCHHHHEECC----------CHHHHHCCCCCCCE-EEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEE
Q ss_conf 971786064031010000----------01011012443324-5422576752523577641379968998620133023
Q gi|254780971|r 79 GIKVMGICNGFQILVELN----------LLPGILMRNCSLKF-VCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNY 147 (219)
Q Consensus 79 g~~vLGICNGfQiL~elG----------LlPg~l~~N~s~rf-~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf 147 (219)
++|+||||.|+|+|++.. +...........+. ...|.... +..... .-.....|. |
T Consensus 77 ~~PiLGIClG~QlL~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~hs---~ 143 (201)
T 1gpw_B 77 ERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNVVKLRSRRLPHMGWNEVI-------FKDTFP---NGYYYFVHT---Y 143 (201)
T ss_dssp TCEEEEETHHHHTTSSEETTEEEEECCCSSSEEEEECCCSSCSEEEEEEEE-------ESSSSC---CEEEEEEES---E
T ss_pred CCCEEEEEEEEEEEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCC-------CCCCCC---CCEEEEEEE---E
T ss_conf 998899986177751000246421572364351121257764210124321-------257787---617998668---9
Q ss_pred EECHHHHHHHHHCCE-EEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 308677411542250-36531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 148 FIDAKGLAEIEKNNQ-IVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 148 ~~~~~~l~~l~~~~~-i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+.. ..+... .+..|.+ ..-+|++. ++|++|+++|||++. ..|++||+|++
T Consensus 144 ~~~------~~~~~~~~~~~~~~-------~~~~~~v~--~~ni~GvQFHPEkS~------~~G~~ll~nFl 194 (201)
T 1gpw_B 144 RAV------CEEEHVLGTTEYDG-------EIFPSAVR--KGRILGFQFHPEKSS------KIGRKLLEKVI 194 (201)
T ss_dssp EEE------ECGGGEEEEEEETT-------EEEEEEEE--ETTEEEESSCGGGSH------HHHHHHHHHHH
T ss_pred EEE------ECCCCEEEEEEECC-------CEEEEEEE--CCCEEEEECCCCCCC------HHHHHHHHHHH
T ss_conf 985------07865178997389-------73899997--299999978985245------62899999999
No 10
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii DSM2661}
Probab=99.76 E-value=1.3e-17 Score=132.05 Aligned_cols=178 Identities=19% Similarity=0.250 Sum_probs=101.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
|.++||.++|. -+|..+|+++ .+.++.++. ++.+|+++|+||+|||= +.+..........+.+..++++
T Consensus 1 m~igil~~~G~--~~~~~~al~~-~g~~~~~v~-~~~~l~~~d~lIlpGG~-------~~~~~~~~~~~~~~~~~~~~~~ 69 (186)
T 2ywj_A 1 MIIGVLAIQGD--VEEHEEAIKK-AGYEAKKVK-RVEDLEGIDALIIPGGE-------STAIGKLMKKYGLLEKIKNSNL 69 (186)
T ss_dssp CEEEEECSSSC--CHHHHHHHHH-TTSEEEEEC-SGGGGTTCSEEEECCSC-------HHHHHHHHHHTTHHHHHHTCCC
T ss_pred CEEEEEECCCC--HHHHHHHHHH-CCCCEEEEC-CHHHHHCCCEEEECCCC-------HHHHHHHCCCCCHHHHHHHCCC
T ss_conf 98999916775--9999999998-899399989-98997179989999987-------1788876441663899997799
Q ss_pred EEEEECCCHHHHEEC-CCHHHHHCCCCCCCEEEEEEEEEEC-CCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHH
Q ss_conf 178606403101000-0010110124433245422576752-52357764137996899862013302330867741154
Q gi|254780971|r 81 KVMGICNGFQILVEL-NLLPGILMRNCSLKFVCKQVLLEVV-NSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIE 158 (219)
Q Consensus 81 ~vLGICNGfQiL~el-GLlPg~l~~N~s~rf~~r~~~~~v~-~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~ 158 (219)
|+||||.|+|+|.+. |.-...+ ................. .....++... .+....+.-|.+-....++.
T Consensus 70 PiLGIClG~Qll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~~~~~~~~------ 140 (186)
T 2ywj_A 70 PILGTCAGMVLLSKGTGINQILL-ELMDITVKRNAYGRQVDSFEKEIEFKDL--GKVYGVFIRAPVVDKILSDD------ 140 (186)
T ss_dssp CEEEETHHHHHHSSCCSSCCCCC-CCSSEEEETTTTCSSSCCEEEEEEETTT--EEEEEEESSCCEEEEECCTT------
T ss_pred CEEEECHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCEEEEEEEEECCCCCCC------
T ss_conf 88998674678875325454322-2245552111121221122323211578--88756999876640235421------
Q ss_pred HCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 159 KNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 159 ~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
-.++..+ .+.|+++. .+|++|+++|||++ .||.++|++++
T Consensus 141 --~~~~~~~---------~~~i~ai~--~~~~~G~QFHPE~s-------~~g~~i~~~Fl 180 (186)
T 2ywj_A 141 --VEVIARD---------GDKIVGVK--QGKYMALSFHPELS-------EDGYKVYKYFV 180 (186)
T ss_dssp --CEEEEEE---------TTEEEEEE--ETTEEEESSCGGGS-------TTHHHHHHHHH
T ss_pred --EEEEECC---------CCEEEEEE--ECCEEEEECCCEEC-------CCHHHHHHHHH
T ss_conf --1344314---------87469998--29999998187546-------71789999999
No 11
>2a9v_A GMP synthase; NP_394403.1, , structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.70 E-value=6.4e-16 Score=121.25 Aligned_cols=179 Identities=16% Similarity=0.259 Sum_probs=109.8
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC--CCCCCCCCCEEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHH-H
Q ss_conf 9689984497064799999999854996399821--5464456478997287-3454311406775200212122332-2
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQ--SDTDIPDVDLIVIPGG-FSYGDYLRCGAIAARTPVMQAIKKK-A 76 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~--~~~~l~~~d~lvipGG-FSygD~l~aG~i~~~~~~~~~i~~~-~ 76 (219)
|||.||.+-.+|... .+++|+++ |.++.++.. ...++.++|+||+||| +++.|.. .....+.++ .
T Consensus 14 ~~i~iiD~g~~~~~~-i~r~L~~l-G~~~~vv~~~~~~~~l~~~dgiIl~GG~~~~~~~~---------~~~~~l~~~~~ 82 (212)
T 2a9v_A 14 LKIYVVDNGGQWTHR-EWRVLREL-GVDTKIVPNDIDSSELDGLDGLVLSGGAPNIDEEL---------DKLGSVGKYID 82 (212)
T ss_dssp CBEEEEEESCCTTCH-HHHHHHHT-TCBCCEEETTSCGGGGTTCSEEEEEEECSCGGGTG---------GGHHHHHHHHH
T ss_pred CEEEEEECCCCHHHH-HHHHHHHC-CCEEEEEECCCCHHHHHCCCEEEECCCCCCCCCCH---------HHHHHHHHHHH
T ss_conf 679999998768999-99999978-98389996979999983699199979998434343---------78999999998
Q ss_pred HCCCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHH
Q ss_conf 05971786064031010000010110124433245422576752523577641379968998620133023308677411
Q gi|254780971|r 77 QQGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAE 156 (219)
Q Consensus 77 ~~g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~ 156 (219)
+.++|+||||-|+|+|.+. +.|...+...... .+....+.. +...+.+.. ..+...-.|.+.-+.
T Consensus 83 ~~~~PiLGIClG~QlL~~~--~gg~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~--~~~~~~~~h~~~v~~-------- 147 (212)
T 2a9v_A 83 DHNYPILGICVGAQFIALH--FGASVVKAKHPEF--GKTKVSVMH-SENIFGGLP--SEITVWENHNDEIIN-------- 147 (212)
T ss_dssp HCCSCEEEETHHHHHHHHH--TTCEEEEEEEEEE--EEEEEEESC-CCGGGTTCC--SEEEEEEEEEEEEES--------
T ss_pred HCCCCEEEEHHHHHHHHHH--CCCEEEEEEEEEC--CCEEEEEEC-CCCCCCCCC--CCEEEECCCEEEEEE--------
T ss_conf 5799899875988999987--1974776213531--550578853-786406888--641784232079986--------
Q ss_pred HHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 54225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 157 IEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 157 l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+...-.+.... +++. ++++...+.+++|++.|||+.. +.+|+.||+|++
T Consensus 148 ~~~~~~vla~~-----~~~~---~~~i~~~~~~i~GvQFHPE~~~-----s~~g~~ll~nFl 196 (212)
T 2a9v_A 148 LPDDFTLAASS-----ATCQ---VQGFYHKTRPIYATQFHPEVEH-----TQYGRDIFRNFI 196 (212)
T ss_dssp CCTTEEEEEEC-----SSCS---CSEEEESSSSEEEESSCTTSTT-----STTHHHHHHHHH
T ss_pred ECCCCEEEEEC-----CCCC---EEEEEECCCCEEEEEECCCCCC-----CCCHHHHHHHHH
T ss_conf 14662699962-----8984---6899999999899995887879-----814899999999
No 12
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8}
Probab=99.68 E-value=1.2e-15 Score=119.60 Aligned_cols=172 Identities=17% Similarity=0.211 Sum_probs=99.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHCCC
Q ss_conf 68998449706479999999985499639982154644564789972873454311406775200212122332-20597
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKK-AQQGI 80 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~-~~~g~ 80 (219)
+|+||.++|. -+|.++||++ .|.++.++. +..+|.++|+||||||-+. + +..-+.+....+.+++. .+.++
T Consensus 4 ~IGVl~l~Gn--~~~~~~al~~-lG~~~~~v~-~~~dl~~~d~lIlPGG~~~-~---~~~~l~~~~~~~~~~~~~~~~~~ 75 (191)
T 2ywd_A 4 VVGVLALQGD--FREHKEALKR-LGIEAKEVR-KKEHLEGLKALIVPGGEST-T---IGKLAREYGIEDEVRKRVEEGSL 75 (191)
T ss_dssp CEEEECSSSC--HHHHHHHHHT-TTCCCEEEC-SGGGGTTCSEEEECSSCHH-H---HHHHHHHTTHHHHHHHHHHTTCC
T ss_pred EEEEEECCCC--HHHHHHHHHH-CCCCEEEEC-CHHHHCCCCEEEECCCCHH-H---HHHHHHHCCCHHHHHHHHHHCCC
T ss_conf 6999988658--9999999998-799899989-9899607898999899668-9---99987775786899999984799
Q ss_pred EEEEECCCHHHHEEC----------CCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEEC
Q ss_conf 178606403101000----------0010110124433245422576752523577641379968998620133023308
Q gi|254780971|r 81 KVMGICNGFQILVEL----------NLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFID 150 (219)
Q Consensus 81 ~vLGICNGfQiL~el----------GLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~ 150 (219)
|+||||.|+|+|.+. |++++.......++-.-.|.. ..+... ......+..|+.. +
T Consensus 76 PiLGIClG~QlL~~~~~e~~~~~glg~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~f~Hs~~---~- 141 (191)
T 2ywd_A 76 ALFGTCAGAIWLAKEIVGYPEQPRLGVLEAWVERNAFGRQVESFEE-------DLEVEG---LGSFHGVFIRAPV---F- 141 (191)
T ss_dssp EEEEETHHHHHHEEEETTCTTCCCCCCEEEEEETTCSCCSSSEEEE-------EEEETT---TEEEEEEEESCCE---E-
T ss_pred CEEEECHHHEEEEHCCCCCCCCCCCEECCCEEECCCCCCCCCCCCC-------CCCCCC---CCCCEEEEECCCC---C-
T ss_conf 6799756670000101566662561023736863677872124436-------644567---8883599970543---4-
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 67741154225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 151 AKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 151 ~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+.+.++-.+..+|.+ -++++- .+|++|.++|||.+- +.+|+++++
T Consensus 142 ----~~~~~~~~~~a~~~~---------~~~av~--~~ni~G~QFHPE~s~--------~~~~~~~Fl 186 (191)
T 2ywd_A 142 ----RRLGEGVEVLARLGD---------LPVLVR--QGKVLASSFHPELTE--------DPRLHRYFL 186 (191)
T ss_dssp ----EEECTTCEEEEEETT---------EEEEEE--ETTEEEESSCGGGSS--------CCHHHHHHH
T ss_pred ----CCCCCEEEEEEEECC---------EEEEEE--ECCEEEEEECCEECC--------CCHHHHHHH
T ss_conf ----556855899999999---------999999--799999987982159--------838999999
No 13
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.52 E-value=2.5e-13 Score=104.67 Aligned_cols=179 Identities=16% Similarity=0.259 Sum_probs=113.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCC----CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 968998449706479999999985499639982154----6445647899728734543114067752002121223322
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSD----TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKA 76 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~----~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~ 76 (219)
|+|+||-+--+|... .++++++ .|.++.++-.+. ....++|++++.||= +.... ....+.+++..
T Consensus 1 mmI~iiD~g~~ft~n-i~~~l~~-lG~~~~i~p~~~~~~~~~~~~~~gv~~sgg~---~~~~~------~~~~~~i~~~~ 69 (189)
T 1wl8_A 1 MMIVIMDNGGQYVHR-IWRTLRY-LGVETKIIPNTTPLEEIKAMNPKGIIFSGGP---SLENT------GNCEKVLEHYD 69 (189)
T ss_dssp CEEEEEECSCTTHHH-HHHHHHH-TTCEEEEEETTCCHHHHHHTCCSEEEECCCS---CTTCC------TTHHHHHHTGG
T ss_pred CEEEEEECCCCHHHH-HHHHHHH-CCCEEEEECCCCCHHHHHHHCCCEEEECCCC---CCCCC------CCHHHHHHHHH
T ss_conf 989999799848999-9999997-8992899969998899983189978758998---78654------66499999998
Q ss_pred HCCCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHH
Q ss_conf 05971786064031010000010110124433245422576752523577641379968998620133023308677411
Q gi|254780971|r 77 QQGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAE 156 (219)
Q Consensus 77 ~~g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~ 156 (219)
+.++|+||||-|+|+|++. +.+...+..... -.|..+.+.+ +++++++.. +.+..+..|..-- +.
T Consensus 70 ~~~~PilGIClG~Q~l~~~--~G~~~~~~~~~~--~g~~~~~~~~-~~~lf~~~~--~~~~~~~~H~~~~--------~~ 134 (189)
T 1wl8_A 70 EFNVPILGICLGHQLIAKF--FGGKVGRGEKAE--YSLVEIEIID-EXEIFKGLP--KRLKVWESHMDEV--------KE 134 (189)
T ss_dssp GTCSCEEEETHHHHHHHHH--HTCEEEECSCCS--CEEEEEEESC-C--CCTTSC--SEEEEEECCSEEE--------EE
T ss_pred HCCCCEEEEEHHHHHHHHH--CCCCCEECCEEE--EEEEEEEEEC-CCEEECCCC--CCEEEEEEEEEEE--------EE
T ss_conf 5599689984213667764--699401232045--5313799927-835653799--8658998557898--------73
Q ss_pred HHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 54225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 157 IEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 157 l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+.++-.+..++.+ + .|+++..++.+++|.|.|||.+. +++|++||+|++
T Consensus 135 ~p~~~~~~a~~~~-----~---~i~~~~~~~~~i~gvQFHPE~s~-----s~~g~~il~nFl 183 (189)
T 1wl8_A 135 LPPKFKILARSET-----C---PIEAMKHEELPIYGVQFHPEVAH-----TEKGEEILRNFA 183 (189)
T ss_dssp CCTTEEEEEEESS-----C---SCSEEEESSSCEEEESSCTTSTT-----STTHHHHHHHHH
T ss_pred CCCCCEEEEECCC-----C---CEEEEEECCCCEEEEECCCCCCC-----CCCHHHHHHHHH
T ss_conf 7986278885289-----8---68999968988999986874589-----924899999999
No 14
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.49 E-value=1.2e-12 Score=100.23 Aligned_cols=173 Identities=17% Similarity=0.201 Sum_probs=103.2
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCC-----CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCH
Q ss_conf 999999998549963998215464-----456478997287345431140677520021212233220597178606403
Q gi|254780971|r 15 NDMIKAITKIIGQSPILVWQSDTD-----IPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGF 89 (219)
Q Consensus 15 ~e~~~A~~~~~~~~~~~v~~~~~~-----l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGf 89 (219)
+-.++.|.+ .|..+.++-.++.. ..++++++++||- ++.... ........+.+..+.++|+||||-|+
T Consensus 15 ~Nl~~~l~~-lG~~~~v~~~d~~~~~~~~~~~~~gvilsgGp--~~p~~~----~~~~~~~~i~~~~~~~~PiLGIClG~ 87 (195)
T 1qdl_B 15 YNIAQIVGE-LGSYPIVIRNDEISIKGIERIDPDRLIISPGP--GTPEKR----EDIGVSLDVIKYLGKRTPILGVCLGH 87 (195)
T ss_dssp HHHHHHHHH-TTCEEEEEETTTSCHHHHHHHCCSEEEECCCS--SCTTSH----HHHTTHHHHHHHHTTTSCEEEETHHH
T ss_pred HHHHHHHHH-CCCEEEEEECCCCCHHHHHHCCCCEEEECCCC--CCCCCC----CCCCCCHHHHHHHCCCCCEEEECHHH
T ss_conf 999999986-89927998089899999986198979988999--974334----33443089999855899889982607
Q ss_pred HHHEECCCHHHHHCCCCCCCEEEEEEEEEE-CCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECC
Q ss_conf 101000001011012443324542257675-2523577641379968998620133023308677411542250365316
Q gi|254780971|r 90 QILVELNLLPGILMRNCSLKFVCKQVLLEV-VNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYA 168 (219)
Q Consensus 90 QiL~elGLlPg~l~~N~s~rf~~r~~~~~v-~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~ 168 (219)
|+|.+. +.+...+.+..... ++..+.. ..+...++.++. ..+..+-.|...-. .......+...+.
T Consensus 88 Qll~~~--~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~~~--------~~~~~~~~~~~~~ 154 (195)
T 1qdl_B 88 QAIGYA--FGAKIRRARKVFHG-KISNIILVNNSPLSLYYGIA--KEFKATRYHSLVVD--------EVHRPLIVDAISA 154 (195)
T ss_dssp HHHHHH--TTCEEEEEEEEEEE-EEEEEEECCSSCCSTTTTCC--SEEEEEEEEEEEEE--------CCCTTEEEEEEES
T ss_pred HHHHHH--CCCEEEECCCCCCC-CEEEEEECCCCCCCCCCCCC--CCCEEEECCCEEEE--------ECCCCCEEEEEEC
T ss_conf 999986--59999834521256-13553101145543546898--66437502314664--------1368846778877
Q ss_pred CCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHCC
Q ss_conf 888889881126688869998999848843432210067762899986429
Q gi|254780971|r 169 SGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLLT 219 (219)
Q Consensus 169 d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~s 219 (219)
+ ...|+|+..++.+++|.+.|||.. .+++|+.+|+|+++
T Consensus 155 ~-------~~~i~ai~~~~~~i~GvQFHPE~~-----~s~~G~~ll~nFl~ 193 (195)
T 1qdl_B 155 E-------DNEIMAIHHEEYPIYGVQFHPESV-----GTSLGYKILYNFLN 193 (195)
T ss_dssp S-------SCCEEEEEESSSSEEEESSBTTST-----TCTTHHHHHHHHHH
T ss_pred C-------CCCEEEEEECCCCEEEEEECCCCC-----CCCCHHHHHHHHHH
T ss_conf 9-------997899998999989999688779-----99888999999996
No 15
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.46 E-value=8e-14 Score=107.82 Aligned_cols=191 Identities=17% Similarity=0.140 Sum_probs=97.0
Q ss_pred EEEEECCCCCCHH----------HHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 8998449706479----------9999999854996399821546------44564789972873454311406775200
Q gi|254780971|r 3 TAIVQIPGLNRDN----------DMIKAITKIIGQSPILVWQSDT------DIPDVDLIVIPGGFSYGDYLRCGAIAART 66 (219)
Q Consensus 3 vaVl~~pGsNcd~----------e~~~A~~~~~~~~~~~v~~~~~------~l~~~d~lvipGGFSygD~l~aG~i~~~~ 66 (219)
++|+.-|-++... .-+++++. +|..++.++.+.. .|+.+|||+||||.+.-+...-+... .
T Consensus 33 IGI~~~~~~~~~~~~~~~~yi~asYvk~ve~-aGa~~vpIp~~~~~~~~~~~l~~idGiilpGG~~~~~~~~y~~~~--~ 109 (315)
T 1l9x_A 33 IGILMQKCRNKVMKNYGRYYIAASYVKYLES-AGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYAKVA--K 109 (315)
T ss_dssp EEEECEECCSHHHHTTCSEEEEHHHHHHHHH-TTCEEEEECSSCCHHHHHHHHHHSSEEEECCCCCCTTTCHHHHHH--H
T ss_pred EEEECCCCCCCCCCCCHHHEEHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHCCCCH--H
T ss_conf 9996874467654333221005999999998-799899988999989999986216989977898765511112003--8
Q ss_pred HHHHHHHH-H-HHCCCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECC--CH--------HHHHHHCCCCC
Q ss_conf 21212233-2-2059717860640310100000101101244332454225767525--23--------57764137996
Q gi|254780971|r 67 PVMQAIKK-K-AQQGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVN--SN--------TAFTKSYKMNQ 134 (219)
Q Consensus 67 ~~~~~i~~-~-~~~g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~--~~--------s~~~~~~~~~~ 134 (219)
.+.+..++ . ..+..|+||||.|||+|... +.|.+........ .....++..+ .. +-++..+....
T Consensus 110 ~~~~~~l~~~~~~~~~PILGIC~GmQlL~v~--~gG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 186 (315)
T 1l9x_A 110 IFYNLSIQSFDDGDYFPVWGTCLGFEELSLL--ISGECLLTATDTV-DVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEP 186 (315)
T ss_dssp HHHHHHHHHHHTTCCCCEEEETHHHHHHHHH--HHSSCCCEEEEEE-EEEECCEECSTTTTCSTTTTSCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHH--HCCCCCCCCCCCC-CCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCC
T ss_conf 9999999987505899899980899999999--5893214665556-861021206876655201233310211036772
Q ss_pred EEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCC
Q ss_conf 899862013302330867741154225036531688888988112668886999899984884343221006
Q gi|254780971|r 135 IIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHG 206 (219)
Q Consensus 135 ~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~ 206 (219)
.. ...|..+-.....+..+.+.+.-.|.. + +++|....|+++-.++..++|.|.||||....|..
T Consensus 187 ~~--~~~h~~~v~~~~~~~~~~l~~~~~i~a-~----s~D~~ie~I~~ie~~~~pi~GvQfHPEk~~fEw~~ 251 (315)
T 1l9x_A 187 LT--ANFHKWSLSVKNFTMNEKLKKFFNVLT-T----NTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKN 251 (315)
T ss_dssp CE--EEEEEEECBHHHHHTCHHHHHHEEEEE-E----EESSSCEEEEEEEESSSCEEEESSCTTHHHHCCSS
T ss_pred EE--EEECCCEEEECCCHHHHHCCCCCEEEE-E----ECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCC
T ss_conf 47--874350799424102433589867999-9----67999303899960799799998799999755566
No 16
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway; 2.10A {Thermus thermophilus HB8} PDB: 2ywc_A*
Probab=99.41 E-value=2e-12 Score=98.86 Aligned_cols=176 Identities=14% Similarity=0.234 Sum_probs=109.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEEECC-C---CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 899844970647999999998549963998215-4---644564789972873454311406775200212122332205
Q gi|254780971|r 3 TAIVQIPGLNRDNDMIKAITKIIGQSPILVWQS-D---TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQ 78 (219)
Q Consensus 3 vaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~-~---~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~ 78 (219)
|+||.|-..+. .-.++.+..+ +....++-++ + ..-.+.+++||-||= +.+..++ ......+..+.
T Consensus 2 IlIlDfGsQyt-qlIaRriREl-gvyseI~P~~~~~eei~~~~p~GIILSGGP--~SV~d~~-------~~~~~~~i~~~ 70 (503)
T 2ywb_A 2 VLVLDFGSQYT-RLIARRLREL-RAFSLILPGDAPLEEVLKHRPQALILSGGP--RSVFDPD-------APRPDPRLFSS 70 (503)
T ss_dssp EEEEESSCTTH-HHHHHHHHTT-TCCEEEEETTCCHHHHHTTCCSEEEECCCS--SCSSCTT-------CCCCCGGGGCS
T ss_pred EEEEECCCHHH-HHHHHHHHHC-CCEEEEECCCCCHHHHHHCCCCEEEECCCC--CCCCCCC-------CCHHHHHHHCC
T ss_conf 89998897299-9999999986-983999869899999971698999989999--8734589-------85031998839
Q ss_pred CCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHH
Q ss_conf 97178606403101000001011012443324542257675252357764137996899862013302330867741154
Q gi|254780971|r 79 GIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIE 158 (219)
Q Consensus 79 g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~ 158 (219)
+.|+||||-|+|+|++. +.|...+.....|- +..+ ...+++.++++. ....+|.+|+.-- .++.
T Consensus 71 ~IPILGICyG~QlLa~~--~GG~V~k~~~~e~G--~~~i--~~~~~~LF~gl~--~~~~VwmsHsD~V--------~~lP 134 (503)
T 2ywb_A 71 GLPLLGICYGMQLLAQE--LGGRVERAGRAEYG--KALL--TRHEGPLFRGLE--GEVQVWMSHQDAV--------TAPP 134 (503)
T ss_dssp SCCEEEETHHHHHHHHT--TTCEEECC---CEE--EEEC--SEECSGGGTTCC--SCCEEEEECSCEE--------EECC
T ss_pred CCCEEEECHHHHHHHHH--CCCEEEECCCCCCC--CCEE--CCCCCCCCCCCC--CCEEEEEEECCCC--------CCCC
T ss_conf 99699981899999998--09989958987667--6100--242565336788--8759999815313--------4699
Q ss_pred HCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 159 KNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 159 ~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+ +...+-..+ .+.||||.+.+.+++|.+.|||.+. +..|+.+++|++
T Consensus 135 ~-gf~viA~s~-------~~~iaai~~~~~~iyGVQFHPEv~h-----T~~G~~iL~NFl 181 (503)
T 2ywb_A 135 P-GWRVVAETE-------ENPVAAIASPDGRAYGVQFHPEVAH-----TPKGMQILENFL 181 (503)
T ss_dssp T-TCEEEEECS-------SCSCSEEECTTSSEEEESBCTTSTT-----STTHHHHHHHHH
T ss_pred C-CCEEEEECC-------CCCCHHHEECCCCCEEEEECCCCCC-----CCCCHHHHHHHH
T ss_conf 9-717874047-------7620111000456516873331046-----868889999999
No 17
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.38 E-value=4e-12 Score=96.96 Aligned_cols=178 Identities=18% Similarity=0.281 Sum_probs=111.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCC---CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 68998449706479999999985499639982154---644564789972873454311406775200212122332205
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSD---TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQ 78 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~---~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~ 78 (219)
||.||-|-+--... .++.+..++-.+.++-+..+ ..-.++++|||-||=+ .+. ...++.. ..+..+-
T Consensus 31 kIlIlDFGsQYtqL-IaRRiRElgVyseI~p~~~~~e~i~~~~p~GIILSGGP~--SV~-----~~~ap~~--~~~if~l 100 (697)
T 2vxo_A 31 AVVILDAGAQYGKV-IDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGPN--SVY-----AEDAPWF--DPAIFTI 100 (697)
T ss_dssp CEEEEEEC--CHHH-HHHHHHHTTCCEEEEETTCCHHHHHHHTCSEEEEEECC--------------CCCC--CGGGTTS
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCEEEEECCCCCHHHHHHCCCCEEEECCCCC--CCC-----CCCCCCC--CHHHHHC
T ss_conf 89999889549999-999998519728997799999999616999999889998--677-----9999988--9999828
Q ss_pred CCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHH
Q ss_conf 97178606403101000001011012443324542257675252357764137996899862013302330867741154
Q gi|254780971|r 79 GIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIE 158 (219)
Q Consensus 79 g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~ 158 (219)
+.||||||-|+|+|.+. +.|...+.....| ....+.+. +++.+++++. ....+|.+|+.- ..++-
T Consensus 101 ~iPILGICyG~Qlia~~--fGG~V~~~~~rEy--G~~~i~i~-~~s~LF~gl~--~~~~VwmSHgD~--------V~~lP 165 (697)
T 2vxo_A 101 GKPVLGICYGMQMMNKV--FGGTVHKKSVRED--GVFNISVD-NTCSLFRGLQ--KEEVVLLTHGDS--------VDKVA 165 (697)
T ss_dssp SCCEEEEEHHHHHHHHH--TTCCBCC---------CEEEEEC-TTSGGGTTCC--SEEEECCCSSCC--------BSSCC
T ss_pred CCCEEEECHHHHHHHHH--CCCEEEECCCCCC--CCCEEEEC-CCCHHHCCCC--CCCEEEEECCCE--------EEECC
T ss_conf 99989987999999998--1998976797433--64058982-7974105899--876797441206--------77368
Q ss_pred HCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 159 KNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 159 ~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
+.-.+.. ..+ | .|||+.+++.+++|++.|||=.. +..|..+++|++
T Consensus 166 ~gf~viA-~s~----~----~iaai~~~~~~iyGVQFHPEV~h-----T~~G~~iL~NFl 211 (697)
T 2vxo_A 166 DGFKVVA-RSG----N----IVAGIANESKKLYGAQFHPEVGL-----TENGKVILKNFL 211 (697)
T ss_dssp TTCEEEE-EET----T----EEEEEEETTTTEEEESSCTTSSS-----STTHHHHHHHHH
T ss_pred CCEEEEE-ECC----C----HHHHHHHCCCCEEEEEECCCCCC-----CCCHHHHHHHHH
T ss_conf 2005775-137----4----58888621466578973541236-----810789999999
No 18
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.37 E-value=5.1e-12 Score=96.31 Aligned_cols=177 Identities=23% Similarity=0.343 Sum_probs=98.0
Q ss_pred HHHHHHHHCCCCEEEEECCC-C----CCCCCCEEEECCCCC-----CCCCCCH--HHH-HHHHH-HHHHHHHHHHCCCEE
Q ss_conf 99999985499639982154-6----445647899728734-----5431140--677-52002-121223322059717
Q gi|254780971|r 17 MIKAITKIIGQSPILVWQSD-T----DIPDVDLIVIPGGFS-----YGDYLRC--GAI-AARTP-VMQAIKKKAQQGIKV 82 (219)
Q Consensus 17 ~~~A~~~~~~~~~~~v~~~~-~----~l~~~d~lvipGGFS-----ygD~l~a--G~i-~~~~~-~~~~i~~~~~~g~~v 82 (219)
-.+|++++ |..++++...+ . .++.+|+|+||||-. ||+.... +.+ ..+.. -...++...++++|+
T Consensus 33 yv~~l~~a-Ga~pv~ip~~~~~~~~~~l~~~DGvll~GG~dv~p~~yg~~~~~~~~~~~~~Rd~~e~~li~~a~~~~~Pi 111 (254)
T 3fij_A 33 YVDAIQKV-GGFPIALPIDDPSTAVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPI 111 (254)
T ss_dssp HHHHHHHH-TCEEEEECCCCGGGHHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHC-CCEEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
T ss_conf 99999986-99899975898588998886569499658877875546877875458876556899999999999859988
Q ss_pred EEECCCHHHHEECCCHHHHHCCCCCC------------CEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEEC
Q ss_conf 86064031010000010110124433------------245422576752523577641379968998620133023308
Q gi|254780971|r 83 MGICNGFQILVELNLLPGILMRNCSL------------KFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFID 150 (219)
Q Consensus 83 LGICNGfQiL~elGLlPg~l~~N~s~------------rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~ 150 (219)
||||-|||+|... +.|.+.++... ...-.|..+.+. ..|.+...+. + ...++..|..+
T Consensus 112 lGIC~G~Qll~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~-~~s~l~~~~~-~-~~~v~s~h~~~----- 181 (254)
T 3fij_A 112 FAICRGMQLVNVA--LGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIE-PTSELAKHHP-N-KKLVNSLHHQF----- 181 (254)
T ss_dssp EEETHHHHHHHHH--TTCCEESSGGGSSSCCCCCBCCSCTTSCCEEEEEC-TTSSGGGTCC-T-TEEECCBCSCE-----
T ss_pred EEECHHHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE-CCCHHHCCCC-C-CEEEEECCHHH-----
T ss_conf 9987518999999--58874234334567642346777622562489980-4750110478-7-43786122032-----
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCC--EEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 677411542250365316888889881126688869998--99984884343221006776289998642
Q gi|254780971|r 151 AKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGN--VLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 151 ~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~--vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
.+++-+.-+|.... +.|. |++|-.++.. ++|.|.|||+... ...++.+||+++|
T Consensus 182 ---v~~l~~~~~v~A~s-----~dg~---ieaie~~~~p~f~~GvQfHPE~~~~---~~~~~~~lf~~FV 237 (254)
T 3fij_A 182 ---IKKLAPSFKVTART-----ADGM---IEAVEGDNLPSWYLGVQWHPELMFQ---TDPESEQLFQALV 237 (254)
T ss_dssp ---ESSCCSSEEEEEEE-----TTCC---EEEEEESSCSSCEEEESSCGGGTGG---GCHHHHHHHHHHH
T ss_pred ---HHCCCCCEEEEEEE-----CCCC---EEEEEECCCCCCEEEEECCCCCCCC---CCHHHHHHHHHHH
T ss_conf ---12057851899991-----8986---8999988999877999828813788---8813769999999
No 19
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphatase, transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli K12} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.34 E-value=1.6e-11 Score=93.09 Aligned_cols=180 Identities=18% Similarity=0.228 Sum_probs=108.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCC--CCCC--CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 68998449706479999999985499639982154--6445--6478997287345431140677520021212233220
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSD--TDIP--DVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQ 77 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~--~~l~--~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~ 77 (219)
||.||.|-+.=.. =.++-+..+ +....++-++. ..+. +.+++||-||= +.+..++ ......+..+
T Consensus 9 kIlIlDfGsQytq-LIARrvREl-gVysEI~p~d~~~eeI~~~~P~GIILSGGP--~SV~d~~-------~p~~~~~i~~ 77 (525)
T 1gpm_A 9 RILILDFGSQYTQ-LVARRVREL-GVYCELWAWDVTEAQIRDFNPSGIILSGGP--ESTTEEN-------SPRAPQYVFE 77 (525)
T ss_dssp EEEEEECSCTTHH-HHHHHHHHT-TCEEEEEESCCCHHHHHHHCCSEEEECCCS--SCTTSTT-------CCCCCGGGGT
T ss_pred EEEEEECCCHHHH-HHHHHHHHC-CCEEEEECCCCCHHHHHHCCCCEEEECCCC--CCCCCCC-------CCCCCHHHHC
T ss_conf 0899989963999-999999973-984899819999999971799999989999--9766689-------9643899981
Q ss_pred CCCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCC------CCEEEEEEECCCEEEEECH
Q ss_conf 5971786064031010000010110124433245422576752523577641379------9689986201330233086
Q gi|254780971|r 78 QGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKM------NQIIKCPVAHHDGNYFIDA 151 (219)
Q Consensus 78 ~g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~------~~~l~~piaHgEGrf~~~~ 151 (219)
.+.|+||||-|+|+|.+. +.|.+.+.....|- ...+.+.+ .+..++++.. ...+.+|.+|+.--
T Consensus 78 ~~iPILGICyG~QlIa~~--~GG~V~~~~~~e~G--~~~i~~~~-~~~lf~gl~~~l~~~~~~s~~VwmSH~D~V----- 147 (525)
T 1gpm_A 78 AGVPVFGVCYGMQTMAMQ--LGGHVEASNEREFG--YAQVEVVN-DSALVRGIEDALTADGKPLLDVWMSHGDKV----- 147 (525)
T ss_dssp SSSCEEEETHHHHHHHHH--HTCEEECCSSCEEE--EEEEEECS-CCTTTTTCCSEECTTSCEEEEEEEEECSEE-----
T ss_pred CCCCEEEECHHHHHHHHH--HCCEEEECCCCCCC--CEEEEEEC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHH-----
T ss_conf 999899988899999998--49999968876545--32689846-865336764543357776533333421121-----
Q ss_pred HHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 7741154225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 152 KGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 152 ~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
..+.+.-.+.. ..+ |+ .||++.+++.+++|.+.|||=.. +++|+.|++|++
T Consensus 148 ---~~lP~gf~viA-~S~----~~---~iaAi~h~~~~iyGVQFHPEv~h-----T~~G~~iL~NFl 198 (525)
T 1gpm_A 148 ---TAIPSDFITVA-STE----SC---PFAIMANEEKRFYGVQFHPEVTH-----TRQGMRMLERFV 198 (525)
T ss_dssp ---EECCTTCEEEE-ECS----SC---SCSEEEETTTTEEEESBCTTSTT-----STTHHHHHHHHH
T ss_pred ---CCCCCCEEEEE-CCC----CC---CEEEEEECCCCEEEEEECHHHHC-----CCCHHHHHHHHH
T ss_conf ---05776179985-379----98---58999974686356630756505-----641589999999
No 20
>1o1y_A Conserved hypothetical protein TM1158; structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.33 E-value=4.5e-11 Score=90.25 Aligned_cols=164 Identities=18% Similarity=0.264 Sum_probs=97.1
Q ss_pred CEEEEEE-----CCCCCCHHHHHHHHHHHCCCCEEEEECC-----CCCCCCCCEEEECCC-CCCCCCCCHHHHHHHHHHH
Q ss_conf 9689984-----4970647999999998549963998215-----464456478997287-3454311406775200212
Q gi|254780971|r 1 MKTAIVQ-----IPGLNRDNDMIKAITKIIGQSPILVWQS-----DTDIPDVDLIVIPGG-FSYGDYLRCGAIAARTPVM 69 (219)
Q Consensus 1 mkvaVl~-----~pGsNcd~e~~~A~~~~~~~~~~~v~~~-----~~~l~~~d~lvipGG-FSygD~l~aG~i~~~~~~~ 69 (219)
|||.||+ -||+ ....+.+ .|.+..++... +..+.+||+||++|| +|--|. ...-......
T Consensus 13 ~rilviqh~~~e~~G~-----~~~~l~~-~g~~~~~~~~~~~~~~p~~~~~~D~lii~GGp~~~~~~---~~~p~~~~~~ 83 (239)
T 1o1y_A 13 VRVLAIRHVEIEDLGM-----MEDIFRE-KNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEE---EKYPFLKYEF 83 (239)
T ss_dssp CEEEEECSSTTSSCTH-----HHHHHHH-TTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCT---TTCTHHHHHH
T ss_pred CEEEEEECCCCCCCHH-----HHHHHHH-CCCEEEEEECCCCCCCCCCHHHCCEEEECCCCCCCCCC---CCCCCHHHHH
T ss_conf 0899997988889779-----9999997-89969999888987787663228989988999877777---6682129999
Q ss_pred HHHHHHHHCCCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEE
Q ss_conf 12233220597178606403101000001011012443324542257675252357764137996899862013302330
Q gi|254780971|r 70 QAIKKKAQQGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFI 149 (219)
Q Consensus 70 ~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~ 149 (219)
+.+++..+.++|+||||-|+|+|.+. +.|...++..+.. -.|..+.. .+++++++++. ..+.+...|.+ .+
T Consensus 84 ~li~~~~~~~~PiLGIClG~Qlla~a--~Gg~V~~~~~~~~-~~~~~~~~-~~~~~l~~~~~--~~~~~~~~H~d-~v-- 154 (239)
T 1o1y_A 84 QLIEEILKKEIPFLGICLGSQMLAKV--LGASVYRGKNGEE-IGWYFVEK-VSDNKFFREFP--DRLRVFQWHGD-TF-- 154 (239)
T ss_dssp HHHHHHHHHTCCEEEETHHHHHHHHH--TTCCEEECTTCCE-EEEEEEEE-CCCCGGGTTSC--SEEEEEEEESE-EE--
T ss_pred HHHHHHHHCCCCEEEECHHHHHHHHH--HCCEEEEECCCEE-CCCEEEEE-CCCHHHHHCCC--CCCEEEEEECE-EE--
T ss_conf 99999997699999981899999997--0986886134302-24156774-36256651487--55279996022-31--
Q ss_pred CHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCH
Q ss_conf 8677411542250365316888889881126688869998999848843
Q gi|254780971|r 150 DAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPE 198 (219)
Q Consensus 150 ~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPE 198 (219)
.+.++..+... . +.+| +.++.. ||++|++.|||
T Consensus 155 ------~lp~~~~~la~-s-~~~~------~qa~~~--~~~~gvQfHPE 187 (239)
T 1o1y_A 155 ------DLPRRATRVFT-S-EKYE------NQGFVY--GKAVGLQFHIE 187 (239)
T ss_dssp ------CCCTTCEEEEE-C-SSCS------CSEEEE--TTEEEESSBSS
T ss_pred ------CCCCCCEEEEE-C-CCCC------EEEEEE--CCEEEEEECCC
T ss_conf ------15898789999-3-8997------799998--99999983972
No 21
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.32 E-value=2.6e-11 Score=91.75 Aligned_cols=177 Identities=16% Similarity=0.208 Sum_probs=104.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEE-ECCC---CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 6899844970647999999998549963998-2154---64456478997287345431140677520021212233220
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITKIIGQSPILV-WQSD---TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQ 77 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v-~~~~---~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~ 77 (219)
||+||.|-...... .+|.+.. .+....++ +..+ ....++|+|||.||= |+ ...... ....++...
T Consensus 26 ~I~iiDfGsq~~~l-I~R~lre-lgv~~eI~p~~~~~~~i~~~~~dgIIlSgGP--~~------~~~~~~-~~~~~~~~~ 94 (218)
T 2vpi_A 26 AVVILDAGAQYGKV-IDRRVRE-LFVQSEIFPLETPAFAIKEQGFRAIIISGGP--NS------VYAEDA-PWFDPAIFT 94 (218)
T ss_dssp CEEEEECSTTTTHH-HHHHHHH-TTCCEEEECTTCCHHHHHHHTCSEEEEEC-----------------C-CCCCGGGGT
T ss_pred CEEEEECCCHHHHH-HHHHHHH-CCCEEEEECCCCCHHHHHHCCCCEEEEECCC--CC------CCCCCC-CHHHHHHHH
T ss_conf 89999899648899-9999871-6966999889999899985398989990999--97------012433-311099983
Q ss_pred CCCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHH
Q ss_conf 59717860640310100000101101244332454225767525235776413799689986201330233086774115
Q gi|254780971|r 78 QGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEI 157 (219)
Q Consensus 78 ~g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l 157 (219)
.++|+||||-|+|+|.+. +.|...+.....+ ........... ..+... ......|..|.+.-.. +
T Consensus 95 ~~~PILGIClG~Qlla~a--~Gg~v~~~~~~~~--g~~~~~~~~~~-~~~~~~--~~~~~v~~~h~~~~~~--------~ 159 (218)
T 2vpi_A 95 IGKPVLGICYGMQMMNKV--FGGTVHKKSVRED--GVFNISVDNTC-SLFRGL--QKEEVVLLTHGDSVDK--------V 159 (218)
T ss_dssp SSCCEEEETHHHHHHHHH--TTCCEEEEEECSC--EEEEEEECTTS-GGGTTC--CSEEEEEECSEEEESS--------C
T ss_pred CCCCEEEEHHHHHHHHHH--CCCCEECCCCCCC--CCCEEEEEECC-CCCCCC--CCCEEEEEEECCCCCC--------C
T ss_conf 899878717989999998--5985522666656--64424542022-100112--2202688871335455--------7
Q ss_pred HHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 4225036531688888988112668886999899984884343221006776289998642
Q gi|254780971|r 158 EKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 158 ~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
...-.+..+. + +.++|+-..+.+++|.+.|||-. .+++|+.||+|++
T Consensus 160 p~~~~v~a~~-~--------~~i~~i~~~~~~i~GVQFHPE~~-----~T~~G~~il~NFl 206 (218)
T 2vpi_A 160 ADGFKVVARS-G--------NIVAGIANESKKLYGAQFHPEVG-----LTENGKVILKNFL 206 (218)
T ss_dssp CTTCEEEEEE-T--------TEEEEEEETTTTEEEESSCTTST-----TSTTHHHHHHHHH
T ss_pred CCCEEEEECC-C--------CHHHHHEECCCCEEEEECCCCCC-----CCCCHHHHHHHHH
T ss_conf 7633898448-9--------94773257899999998786237-----9835799999999
No 22
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.23 E-value=8.7e-11 Score=88.42 Aligned_cols=166 Identities=16% Similarity=0.228 Sum_probs=96.4
Q ss_pred HHHHHHHHHHCCCCEEEEECCC--------CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 9999999985499639982154--------64456478997287345431140677520021212233220597178606
Q gi|254780971|r 15 NDMIKAITKIIGQSPILVWQSD--------TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGIC 86 (219)
Q Consensus 15 ~e~~~A~~~~~~~~~~~v~~~~--------~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGIC 86 (219)
+-.+++|.+ .|.++.++-... ....++|+|||.|| .|+.-... ....+.+..++++|+||||
T Consensus 14 ~Niv~~l~~-~g~~v~V~~~~~~~~~~~~~~~~~~~dgiILsgG--Pg~p~~~~-------~~~~~~~~~~~~iPiLGIC 83 (192)
T 1i1q_B 14 WNLADQLRT-NGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPG--PGVPSEAG-------CMPELLTRLRGKLPIIGIC 83 (192)
T ss_dssp HHHHHHHHH-TTCEEEEEETTSCSHHHHHHHTTCSSEEEEECCC--SSCGGGST-------THHHHHHHHBTTBCEEEET
T ss_pred HHHHHHHHH-CCCCEEEEECCCCCCCCHHHHHHCCCCEEEEECC--CCCCCCCC-------CCHHHHHHHHCCCCHHHHC
T ss_conf 999999997-8990799989987736799998349696998199--98714331-------3379999985699814538
Q ss_pred CCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEE
Q ss_conf 40310100000101101244332454225767525235776413799689986201330233086774115422503653
Q gi|254780971|r 87 NGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFR 166 (219)
Q Consensus 87 NGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~ 166 (219)
-|+|+|.+. +.|.+.+...... .+.. .+.......+.+.. ..+..+..|...- +.+.+ +..+.-
T Consensus 84 ~G~Q~la~~--~Gg~v~~~~~~~~--g~~~-~~~~~~~~~~~~~~--~~~~~~~~h~~~~--------~~lp~-~~~~~a 147 (192)
T 1i1q_B 84 LGHQAIVEA--YGGYVGQAGEILH--GKAT-SIEHDGQAMFAGLA--NPLPVARYHSLVG--------SNVPA-GLTINA 147 (192)
T ss_dssp HHHHHHHHH--TSCCCCC---CCS--SEEE-EEEECCCGGGTTSC--SSEEEEECCC-----------CCCCT-TCEEEE
T ss_pred HHHHHHHHH--CCCEEEECCCCEE--CEEE-EEEECCCCEECCCC--CCCCCCCCCCCEE--------ECCCC-EEEEEE
T ss_conf 767999987--4988998997534--5067-88514630440322--1243122233101--------02785-389997
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHCC
Q ss_conf 16888889881126688869998999848843432210067762899986429
Q gi|254780971|r 167 YASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLLT 219 (219)
Q Consensus 167 Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~s 219 (219)
+.+ | -|+++...+.+++|.|.|||- . .+++|.+|++|++|
T Consensus 148 ~~~-----~---~i~ai~~~~~~i~GvQFHPEs-~----~t~~G~~il~nFl~ 187 (192)
T 1i1q_B 148 HFN-----G---MVMAVRHDADRVCGFQFHPES-I----LTTQGARLLEQTLA 187 (192)
T ss_dssp EET-----T---EEEEEEETTTTEEEESSBTTS-T----TCTTHHHHHHHHHH
T ss_pred CCC-----C---EEEEEEECCCCEEEEECCCCC-C----CCCCHHHHHHHHHH
T ss_conf 899-----9---688889899988999807864-8----98886999999999
No 23
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=99.23 E-value=1.8e-09 Score=80.02 Aligned_cols=174 Identities=18% Similarity=0.230 Sum_probs=100.7
Q ss_pred CCCCEEEEECCCC------------CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH
Q ss_conf 4996399821546------------4456478997287345431140677520021212233220597178606403101
Q gi|254780971|r 25 IGQSPILVWQSDT------------DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQIL 92 (219)
Q Consensus 25 ~~~~~~~v~~~~~------------~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL 92 (219)
.+....+.|.+.. .|.++|+|++||||.+ +-..|++.+ ++-.-++..|.||||-|||++
T Consensus 39 ~~~~v~i~wi~se~le~~~~~~~~~~L~~~dGIlvpgGFG~--RG~eGkI~A-------i~yARen~iPfLGIClGmQ~a 109 (273)
T 2w7t_A 39 LQVRLDILYVDSEELEGPNADEARKALLGCDGIFVPGGFGN--RGVDGKCAA-------AQVARMNNIPYFGVXLGMQVA 109 (273)
T ss_dssp HTCCEEEEEEEGGGGSSTTTHHHHHHHHTCSEEEECCCCTT--TTHHHHHHH-------HHHHHHHTCCEEEETHHHHHH
T ss_pred HCCCEEEEEEEHHHCCCCCHHHHHHHHCCCCCEEECCCCCC--CCHHHHHHH-------HHHHHHCCCCCHHHHHHHHHH
T ss_conf 19836899987334247677789987425774685885787--764789999-------999997488602455667999
Q ss_pred E-E-----CCCH--------HHH-------HCC---CCCC--CEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEE
Q ss_conf 0-0-----0001--------011-------012---4433--24542257675252357764137996899862013302
Q gi|254780971|r 93 V-E-----LNLL--------PGI-------LMR---NCSL--KFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGN 146 (219)
Q Consensus 93 ~-e-----lGLl--------Pg~-------l~~---N~s~--rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGr 146 (219)
+ | +||- |.+ +.. +..+ |.-... +.+....+...+.+...+.+.=- | --|
T Consensus 110 vIEfARnvlg~~dA~s~E~~~~~~~~vi~~l~~~~~~~ggtmRLG~~~--~~~~~~~~~~~~~y~~~~~i~ER--h-RHR 184 (273)
T 2w7t_A 110 VIELSRNVVGWSDANSEEFNKESTHQVVRIMDCDRNKMGANMHLGACD--VYIVEKSSIMAKIYSKSNIVVER--H-RHR 184 (273)
T ss_dssp HHHHHHHTTCCTTCEETTTCTTCSCEEEECCGGGBCSSCBCCEEEEEE--EEECCTTSHHHHHTTTCSEEEEE--E-EEC
T ss_pred HHHHHHHHCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCC--EEEECHHHHHHHHHCCCCEEECC--C-CCC
T ss_conf 999999873986653644289999983664210122357615505542--36401357999985278488435--5-534
Q ss_pred EEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCC-CCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 33086774115422503653168888898811266888699-9899984884343221006776289998642
Q gi|254780971|r 147 YFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRR-GNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 147 f~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~-G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
|-++++..+.|++++++..=..|+..+++.. |..|--++ --.+|.+.|||....+.... ++|.++|
T Consensus 185 YevN~~y~~~le~~gl~~sG~~~~~~~~~~~--ve~iEl~~HpFfvg~QfHPEf~Srp~~ph----Plf~~fi 251 (273)
T 2w7t_A 185 YEVNTAYFEDLRKAGLCISAVTDPTFSSRCR--VEAVENPSLRFFLAVQFHPEFISTPMDPA----PTYLSFM 251 (273)
T ss_dssp CEECGGGHHHHHHTTCEEEEESCTTCCTTCC--EEEEECTTSSSEEEESSCGGGSCBTTBCC----HHHHHHH
T ss_pred CEECHHHHHHHHHCCCEEEEECCCCCCCCCE--EEEEECCCCCEEEEECCCCCCCCCCCCCC----CCHHHHH
T ss_conf 1016898899986897899947887887753--89998699980899767613568999988----3099999
No 24
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=99.17 E-value=7.5e-10 Score=82.46 Aligned_cols=178 Identities=23% Similarity=0.347 Sum_probs=100.5
Q ss_pred HHHHHHHH---CCCCEEEEECCCC-------------------CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999985---4996399821546-------------------4456478997287345431140677520021212233
Q gi|254780971|r 17 MIKAITKI---IGQSPILVWQSDT-------------------DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKK 74 (219)
Q Consensus 17 ~~~A~~~~---~~~~~~~v~~~~~-------------------~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~ 74 (219)
...||... .+....+.|.+.+ .|.++|+|++|||| |++-..|++.| ++-
T Consensus 44 v~EAL~ha~~~~~~~v~i~widse~le~~~~~~~~~~~~~~~~~L~~~dGIlVPGGF--G~RGieGkI~A-------i~y 114 (289)
T 2v4u_A 44 VFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILVPGGF--GIRGTLGKLQA-------ISW 114 (289)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEGGGGSHHHHHHCHHHHHHHHHHHHHCSEEEECSCC--SSTTHHHHHHH-------HHH
T ss_pred HHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCC--CCCCHHHHHHH-------HHH
T ss_conf 999999732861983569998406620344444630156789874348837968978--87761589999-------999
Q ss_pred HHHCCCEEEEECCCHHHHE-E-----CCCHHHH----H-----------C-----CCCCC--CEEEEEEEEEECCCHHHH
Q ss_conf 2205971786064031010-0-----0001011----0-----------1-----24433--245422576752523577
Q gi|254780971|r 75 KAQQGIKVMGICNGFQILV-E-----LNLLPGI----L-----------M-----RNCSL--KFVCKQVLLEVVNSNTAF 126 (219)
Q Consensus 75 ~~~~g~~vLGICNGfQiL~-e-----lGLlPg~----l-----------~-----~N~s~--rf~~r~~~~~v~~~~s~~ 126 (219)
.-++..|.||||-|||+++ | +||- ++ + + .+.-+ |.-...+.+ ....+..
T Consensus 115 ARen~IPfLGIClGmQ~avIEfARnVlgl~-dAnS~Ef~~~~~~~vi~~m~~~~~~~~GGTMRLG~~~~~l--~~~~~~~ 191 (289)
T 2v4u_A 115 ARTKKIPFLGVXLGMQLAVIEFARNCLNLK-DADSTEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVF--KTENSIL 191 (289)
T ss_dssp HHHTTCCEEEETHHHHHHHHHHHHHHSCCT-TEEESTTCTTCSEEEEEECCBCCTTCSSCBCEEEEEEEEE--SCSCCHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCEEEEE--ECCHHHH
T ss_conf 998499702356788999999999866888-8875001589998299971203376665521114222476--3104299
Q ss_pred HHHCCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCC
Q ss_conf 64137996899862013302330867741154225036531688888988112668886999899984884343221006
Q gi|254780971|r 127 TKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHG 206 (219)
Q Consensus 127 ~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~ 206 (219)
-+-+...+.+.= .| --||-++.+..+.|++.+++..- .+|+|..--|.=+-+ .-=.+|.+.|||....+...
T Consensus 192 ~~~y~~~~~I~E--RH-RHRYEvN~~y~~~le~~Gl~~sG----~s~dg~lvEivEl~~-HPffvg~QFHPEf~Srp~~p 263 (289)
T 2v4u_A 192 RKLYGDVPFIEE--RH-RHRFEVNPNLIKQFEQNDLSFVG----QDVDGDRMEIIELAN-HPYFVGVQFHPEFSSRPMKP 263 (289)
T ss_dssp HHHTTSCSEEEE--EE-EECEEECGGGSGGGTTSSEEEEE----EETTSCSEEEEEESS-SSCEEEESSBGGGGCBTTBC
T ss_pred HHHHCCCCEEEC--CC-CCCCCCCHHHHHHHHCCCCEEEE----ECCCCCEEEEEECCC-CCCEEEECCCCCCCCCCCCC
T ss_conf 997347778925--66-77732198998888608828998----889998589998289-98189974773345899998
Q ss_pred CCCHHHHHHHHC
Q ss_conf 776289998642
Q gi|254780971|r 207 GIDGRGLFASLL 218 (219)
Q Consensus 207 ~~dG~~~f~~~~ 218 (219)
. ++|.++|
T Consensus 264 h----PLF~~Fi 271 (289)
T 2v4u_A 264 S----PPYLGLL 271 (289)
T ss_dssp C----HHHHHHH
T ss_pred C----CCHHHHH
T ss_conf 8----0299999
No 25
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.09 E-value=9.9e-09 Score=75.29 Aligned_cols=169 Identities=16% Similarity=0.108 Sum_probs=92.2
Q ss_pred CE-EEEEECCCCCCHHHHHHHHHHHCCCCEEEEE--CCC---CCCCCCCEEEECCCC-CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 96-8998449706479999999985499639982--154---644564789972873-4543114067752002121223
Q gi|254780971|r 1 MK-TAIVQIPGLNRDNDMIKAITKIIGQSPILVW--QSD---TDIPDVDLIVIPGGF-SYGDYLRCGAIAARTPVMQAIK 73 (219)
Q Consensus 1 mk-vaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~--~~~---~~l~~~d~lvipGGF-SygD~l~aG~i~~~~~~~~~i~ 73 (219)
|| |.||+-.=+..---....+.. .+....++. ..+ .++.+||++|+.||= |--|.. .+ ...+.+.++
T Consensus 3 mk~vlv~qh~~~e~~g~~~~~l~~-~g~~~~v~~~~~~~~~P~~~~~~dglii~Gg~~~~~d~~---p~--~~~~~~~i~ 76 (250)
T 3m3p_A 3 LKPVMIIQFSASEGPGHFGDFLAG-EHIPFQVLRMDRSDPLPAEIRDCSGLAMMGGPMSANDDL---PW--MPTLLALIR 76 (250)
T ss_dssp CCCEEEEESSSSCCCHHHHHHHHH-TTCCEEEEEGGGTCCCCSCGGGSSEEEECCCSSCTTSCC---TT--HHHHHHHHH
T ss_pred CCEEEEEECCCCCCCHHHHHHHHH-CCCEEEEEECCCCCCCCCCHHHCCEEEECCCCCCCCCCC---HH--HHHHHHHHH
T ss_conf 864999957999981399999985-899799997899987877763389899909998777877---65--899999999
Q ss_pred HHHHCCCEEEEECCCHHHHEECCCHHHHHCCCCCCCEEEEEEEEEECCC-HHHHHHHCCCCCEEEEEEECCCEEEEECHH
Q ss_conf 3220597178606403101000001011012443324542257675252-357764137996899862013302330867
Q gi|254780971|r 74 KKAQQGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVVNS-NTAFTKSYKMNQIIKCPVAHHDGNYFIDAK 152 (219)
Q Consensus 74 ~~~~~g~~vLGICNGfQiL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~-~s~~~~~~~~~~~l~~piaHgEGrf~~~~~ 152 (219)
+..+.++|+||||-|+|+|.+. +.|...++ .+-+-.|..+...+. +...+.+.. ..+.+...|.+ .+.
T Consensus 77 ~~~~~~~PilGIC~G~Qlla~a--lGG~V~~~--~~~e~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~H~d-~~~---- 145 (250)
T 3m3p_A 77 DAVAQRVPVIGHCLGGQLLAKA--MGGEVTDS--PHAEIGWVRAWPQHVPQALEWLGTW--DELELFEWHYQ-TFS---- 145 (250)
T ss_dssp HHHHHTCCEEEETHHHHHHHHH--TTCCEEEE--EEEEEEEEEEEECSSHHHHHHHSCS--SCEEEEEEEEE-EEC----
T ss_pred HHHHCCCCEEEEEHHHHHHHHC--CCCEEEEC--CCCCCCCEEEEEEECCCCCCCCCCC--CCEEEEEEEEE-EEE----
T ss_conf 9997599889985656789851--59578756--8532343145764057752114788--75478986545-753----
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHH
Q ss_conf 74115422503653168888898811266888699989998488434
Q gi|254780971|r 153 GLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPEN 199 (219)
Q Consensus 153 ~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER 199 (219)
+.+ +-..+-+.+ .+.+.++.- ..+++|++.|||-
T Consensus 146 ----lP~-~~~~la~s~-------~~~~qa~~~-~~~~~g~QfHPE~ 179 (250)
T 3m3p_A 146 ----IPP-GAVHILRSE-------HCANQAYVL-DDLHIGFQCHIEM 179 (250)
T ss_dssp ----CCT-TEEEEEEET-------TEEEEEEEE-TTTEEEESSCTTC
T ss_pred ----CCC-CCCEEEECC-------CCCEEEEEE-CCCEEEEEECCCC
T ss_conf ----599-612055058-------985799997-9968999979588
No 26
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=99.07 E-value=7.6e-09 Score=76.02 Aligned_cols=178 Identities=21% Similarity=0.318 Sum_probs=105.1
Q ss_pred HHHHHHHH---CCCCEEEEECCCC---------CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 99999985---4996399821546---------44564789972873454311406775200212122332205971786
Q gi|254780971|r 17 MIKAITKI---IGQSPILVWQSDT---------DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMG 84 (219)
Q Consensus 17 ~~~A~~~~---~~~~~~~v~~~~~---------~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLG 84 (219)
...||..+ .+....+.|.+.+ .|.++|++++|||| |++-.-|+|.| ++-.-+++.|-||
T Consensus 319 v~EAL~HAg~~~~~kv~i~wIdse~l~~~~~~~~L~~~dGIlVPGGF--G~RGiEGKI~A-------i~yARen~IPfLG 389 (550)
T 1vco_A 319 LLEALRHAGIKNRARVEVKWVDAESLEAADLEEAFRDVSGILVPGGF--GVRGIEGKVRA-------AQYARERKIPYLG 389 (550)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEGGGC--CCHHHHTTTCSCEEECCCC--SSTTHHHHHHH-------HHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHCCCEEEECCCC--CCCCHHHHHHH-------HHHHHHCCCCCCC
T ss_conf 98899887775397058999851033303389986058838941778--76774589999-------9989873998420
Q ss_pred ECCCHHHHE-E-----CCCH--------HHH------HCCC------CCC--CEEEEEEEEEECCCHHHHHHHCCCCCEE
Q ss_conf 064031010-0-----0001--------011------0124------433--2454225767525235776413799689
Q gi|254780971|r 85 ICNGFQILV-E-----LNLL--------PGI------LMRN------CSL--KFVCKQVLLEVVNSNTAFTKSYKMNQII 136 (219)
Q Consensus 85 ICNGfQiL~-e-----lGLl--------Pg~------l~~N------~s~--rf~~r~~~~~v~~~~s~~~~~~~~~~~l 136 (219)
||-|||+++ | +||= |.+ +++. .-+ |.-...+.++ ..|...+-+....+
T Consensus 390 ICLGmQ~avIEfARNVlgl~dAnStEfd~~t~~pVI~lm~eq~~~~~~GGTMRLG~~~~~l~---~gS~a~~iYg~~~I- 465 (550)
T 1vco_A 390 ICLGLQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIK---PGTLLHRLYGKEEV- 465 (550)
T ss_dssp ETHHHHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGCC---CCCCEEEEEEEEEC---TTSHHHHHHCCSEE-
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCCCCCCCEEEEEC---CCCHHHHHHCCCCC-
T ss_conf 01224699999999844999998557799999977986546321577554316676578856---88868997589856-
Q ss_pred EEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCC--CCC-EEEEECCC-CCEEEECCCCHHHCCCCCCCCCHHH
Q ss_conf 9862013302330867741154225036531688888988--112-66888699-9899984884343221006776289
Q gi|254780971|r 137 KCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGS--LHD-IAGVINRR-GNVLGMMPHPENIIEKFHGGIDGRG 212 (219)
Q Consensus 137 ~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS--~~~-IAgi~s~~-G~vlgmMPHPER~~~~~~~~~dG~~ 212 (219)
.=.| --||-++.+..++|+++|.+.--. +|++. ..+ +..|=-++ --.+|.+.|||....+.. .-+
T Consensus 466 --~ERH-RHRYEvN~~y~~~le~~Gl~~sG~----spd~r~~~~~lvEiiEl~~HPfFvg~QFHPEf~SrP~~----PhP 534 (550)
T 1vco_A 466 --LERH-RHRYEVNPLYVDGLERAGLVVSAT----TPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMR----PSP 534 (550)
T ss_dssp --EEEE-EESEEECHHHHHHHHHHTEEEEEE----CCCBTTBSTTCEEEEEETTSSSEEEESSCGGGGCBTTB----CCH
T ss_pred --CCCC-CCCCCCCHHHHHHHHHCCCEEEEE----CCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCC----CCC
T ss_conf --3005-766432989999999789899997----88766567880799983899837886687412489999----881
Q ss_pred HHHHHC
Q ss_conf 998642
Q gi|254780971|r 213 LFASLL 218 (219)
Q Consensus 213 ~f~~~~ 218 (219)
+|.++|
T Consensus 535 LF~~fi 540 (550)
T 1vco_A 535 PFVGFV 540 (550)
T ss_dssp HHHHHH
T ss_pred CHHHHH
T ss_conf 399999
No 27
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=99.01 E-value=6.5e-09 Score=76.47 Aligned_cols=175 Identities=25% Similarity=0.406 Sum_probs=105.2
Q ss_pred HHHHHHHH---CCCCEEEEECCCC-----------CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 99999985---4996399821546-----------445647899728734543114067752002121223322059717
Q gi|254780971|r 17 MIKAITKI---IGQSPILVWQSDT-----------DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKV 82 (219)
Q Consensus 17 ~~~A~~~~---~~~~~~~v~~~~~-----------~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~v 82 (219)
...|+.++ .+....+.|.+.+ .|.++|++++|||| |++---|+|.| ++-.-++..|-
T Consensus 312 i~EAL~HAg~~~~~kv~I~wIdse~le~~~~~~~~~L~~~dGIlVPGGF--G~RGiEGkI~A-------i~yAREn~IPf 382 (535)
T 3nva_A 312 IKEAIYHASAYIGVRPKLIWIESTDLESDTKNLNEILGNVNGIIVLPGF--GSRGAEGKIKA-------IKYAREHNIPF 382 (535)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEGGGGCCSSSCCTTTTTSCSEEEECCCC--SSTTHHHHHHH-------HHHHHHHTCCE
T ss_pred HHHHHHHHHHHHCCEEEEEEEECHHCCCCHHHHHHHHHCCCCEEECCCC--CCCCCHHHHHH-------HHHHHHCCCCC
T ss_conf 4689986567651323699984023023026799997328818957987--65651489999-------99998649980
Q ss_pred EEECCCHHHHE-E-----CCCH--------HHH------HCCC------C--CCCEEEEEEEEEECCCHHHHHHHCCCCC
Q ss_conf 86064031010-0-----0001--------011------0124------4--3324542257675252357764137996
Q gi|254780971|r 83 MGICNGFQILV-E-----LNLL--------PGI------LMRN------C--SLKFVCKQVLLEVVNSNTAFTKSYKMNQ 134 (219)
Q Consensus 83 LGICNGfQiL~-e-----lGLl--------Pg~------l~~N------~--s~rf~~r~~~~~v~~~~s~~~~~~~~~~ 134 (219)
||||-|||+++ | +||= |.+ ++.. . +-|.-...+.++ ..|...+-+....
T Consensus 383 LGICLGmQ~AVIEfARnVlgl~dAnStEf~~~t~~pVI~lm~eq~~~~~~GGTMRLG~~~~~l~---~gS~~~~iYg~~~ 459 (535)
T 3nva_A 383 LGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILK---EGTIAYQLYGKKV 459 (535)
T ss_dssp EEETHHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSCBCSSCCCCEEEEEEEEEC---TTSHHHHHHTSSE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEC---CCCHHHHHHCCCC
T ss_conf 2144324899999999855998876433577899988996223577887885667787203757---9889999858783
Q ss_pred EEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCC-CCEEEECCCCHHHCCCCCCCCCHHHH
Q ss_conf 89986201330233086774115422503653168888898811266888699-98999848843432210067762899
Q gi|254780971|r 135 IIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRR-GNVLGMMPHPENIIEKFHGGIDGRGL 213 (219)
Q Consensus 135 ~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~-G~vlgmMPHPER~~~~~~~~~dG~~~ 213 (219)
+ .=.| --||-++++..++|++.+.+..-. +|+| . +..|=-++ -=.+|.+.|||....+.. .-++
T Consensus 460 I---~ERH-RHRYEvN~~y~~~le~~Gl~~sG~----~~~g-~--vEiiEl~~HPfFvg~QFHPEf~Srp~~----phPL 524 (535)
T 3nva_A 460 V---YERH-RHRYEVNPKYVDILEDAGLVVSGI----SENG-L--VEIIELPSNKFFVATQAHPEFKSRPTN----PSPI 524 (535)
T ss_dssp E---EEEE-EECCEECHHHHHHHHHTTCEEEEE----CTTC-C--EEEEECTTSSCEEEESSCGGGGCCSSS----CCHH
T ss_pred C---CCCC-CCCCCCCHHHHHHHHHCCCEEEEE----CCCC-C--EEEEECCCCCEEEEECCCCCCCCCCCC----CCCC
T ss_conf 7---6455-877412889999999689889998----7999-8--899992899708986686445689999----9806
Q ss_pred HHHHC
Q ss_conf 98642
Q gi|254780971|r 214 FASLL 218 (219)
Q Consensus 214 f~~~~ 218 (219)
|.++|
T Consensus 525 F~~fi 529 (535)
T 3nva_A 525 YLGFI 529 (535)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 28
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5'-triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=98.99 E-value=8.3e-09 Score=75.78 Aligned_cols=177 Identities=24% Similarity=0.338 Sum_probs=104.5
Q ss_pred HHHHHHHH---CCCCEEEEECCC--------CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 99999985---499639982154--------6445647899728734543114067752002121223322059717860
Q gi|254780971|r 17 MIKAITKI---IGQSPILVWQSD--------TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGI 85 (219)
Q Consensus 17 ~~~A~~~~---~~~~~~~v~~~~--------~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGI 85 (219)
...|+..+ .+....+.|.+. ..|.++|++++|||| |++---|+|.| ++-.-+...|-|||
T Consensus 308 v~EAL~HAg~~~~~kv~i~wIdse~le~~~~~~L~~~dGIlVPGGF--G~RGiEGKI~A-------i~yARen~IPfLGI 378 (545)
T 1s1m_A 308 VIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGF--GYRGVEGMITT-------ARFARENNIPYLGI 378 (545)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEHHHHHHHCTTTTTTCSEEEECCCC--SSTTHHHHHHH-------HHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEECCHHHHCHHHHHHHCCCCEEEECCCC--CCCCCCHHHHH-------HHHHHHCCCCEEEH
T ss_conf 8868865210248878999815565222344442135619967888--87770319999-------99997679985324
Q ss_pred CCCHHHHE-E-----CCCH--------HHH------HCC---CCC---------------CCEEEEEEEEEECCCHHHHH
Q ss_conf 64031010-0-----0001--------011------012---443---------------32454225767525235776
Q gi|254780971|r 86 CNGFQILV-E-----LNLL--------PGI------LMR---NCS---------------LKFVCKQVLLEVVNSNTAFT 127 (219)
Q Consensus 86 CNGfQiL~-e-----lGLl--------Pg~------l~~---N~s---------------~rf~~r~~~~~v~~~~s~~~ 127 (219)
|-|||+++ | +||= |.+ ++. +.. -|.-+..+.++ ..|...
T Consensus 379 CLGmQ~aVIEfARNVlgl~dAnStEf~~~t~~pVI~lm~e~~~~~~~~e~~~~~~~~GGTMRLG~y~~~l~---~gS~~~ 455 (545)
T 1s1m_A 379 CLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLV---DDSLVR 455 (545)
T ss_dssp THHHHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCCCTTSCCC----------CCEEEEEEEEEC---TTCHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCEEEECCCCCCCCEEECCCEEEEEC---CCCHHH
T ss_conf 67679999999997359999872047999999789954222256674343012456775035574336707---988799
Q ss_pred HHCCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCCCC
Q ss_conf 41379968998620133023308677411542250365316888889881126688869998999848843432210067
Q gi|254780971|r 128 KSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENIIEKFHGG 207 (219)
Q Consensus 128 ~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~ 207 (219)
+-+....+. =.| --||-++++..++|++.+.+.-- .+|.|..--|.-+-+ .--.+|-+.|||....|..
T Consensus 456 ~iYg~~~I~---ERH-RHRYEvN~~y~~~le~~Gl~~sG----~~~~~~lvEiiEl~~-Hpffvg~QfHPEf~Srp~~-- 524 (545)
T 1s1m_A 456 QLYNAPTIV---ERH-RHRYEVNNMLLKQIEDAGLRVAG----RSGDDQLVEIIEVPN-HPWFVACQFHPEFTSTPRD-- 524 (545)
T ss_dssp HHTTSSEEE---EEE-EECCEECHHHHHHHHHTTCEEEE----ECSSSCCEEEEECTT-SSSEEEESSCGGGTCCTTT--
T ss_pred HHHCCCEEC---CCC-CCCCCCCHHHHHHHHHCCCEEEE----ECCCCCEEEEEECCC-CCCEEEECCCCCCCCCCCC--
T ss_conf 984888564---225-76532088999999978989999----989999799999189-9847886687413589999--
Q ss_pred CCHHHHHHHHC
Q ss_conf 76289998642
Q gi|254780971|r 208 IDGRGLFASLL 218 (219)
Q Consensus 208 ~dG~~~f~~~~ 218 (219)
.-++|.+++
T Consensus 525 --phPlF~~fi 533 (545)
T 1s1m_A 525 --GHPLFAGFV 533 (545)
T ss_dssp --CCHHHHHHH
T ss_pred --CCCCHHHHH
T ss_conf --881099999
No 29
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=98.95 E-value=2.9e-08 Score=72.28 Aligned_cols=164 Identities=21% Similarity=0.267 Sum_probs=86.5
Q ss_pred HHHHHHHHHHCCCCEEEEECC-C---CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH
Q ss_conf 999999998549963998215-4---644564789972873454311406775200212122332205971786064031
Q gi|254780971|r 15 NDMIKAITKIIGQSPILVWQS-D---TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQ 90 (219)
Q Consensus 15 ~e~~~A~~~~~~~~~~~v~~~-~---~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQ 90 (219)
+-..+.|.+ -+.++.++=++ + ..-.++|+|+|-.|= ||.-. -....+.++++.+...|+||||-|.|
T Consensus 202 ~nIlr~L~~-rg~~V~VvP~~~~~~eI~~~~pDgi~lS~GP--G~P~~------~~~~i~~i~~~~~~~~PilGICLGhQ 272 (379)
T 1a9x_B 202 RNILRMLVD-RGCRLTIVPAQTSAEDVLKMNPDGIFLSNGP--GDPAP------CDYAITAIQKFLETDIPVFGICLGHQ 272 (379)
T ss_dssp HHHHHHHHH-TTEEEEEEETTCCHHHHHTTCCSEEEECCCS--BCSTT------CHHHHHHHHHHTTSCCCEEEETHHHH
T ss_pred CCHHHHHHH-CCCEEEEECCCCCHHHHHHCCCCEEEECCCC--CCCCH------HHHHHHHHHHHHHCCCCEEEEEHHHH
T ss_conf 248999997-8998999899999999984199989966999--99515------56899999999816998899747789
Q ss_pred HHEECCCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCC
Q ss_conf 01000001011012443324542257675252357764137996899862013302330867741154225036531688
Q gi|254780971|r 91 ILVELNLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASG 170 (219)
Q Consensus 91 iL~elGLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~ 170 (219)
+|... +.+...+ .+|.-|=.+--|.+ ...+.+...+-.|+ |.++++.+ .+ +..+.-.
T Consensus 273 ll~~a--~G~~~~k---~~~gh~G~n~pv~~--------~~~~~~~~tsqnHg---~~v~~~sl---p~-~~~vt~~--- 329 (379)
T 1a9x_B 273 LLALA--SGAKTVK---MKFGHHGGNHPVKD--------VEKNVVMITAQNHG---FAVDEATL---PA-NLRVTHK--- 329 (379)
T ss_dssp HHHHH--TTCCEEE---EEEEEEEEEEEEEE--------TTTTEEEEEEEEEE---EEECSTTC---CT-TEEEEEE---
T ss_pred HHHHH--HCCEEEE---CCCCCCCCCCCHHC--------CCCCCEEEECCCCE---EEEECCCC---CC-CEEEEEE---
T ss_conf 99998--3973997---89888897074002--------67882799438956---79977878---99-7399999---
Q ss_pred CCCC-CCCCCEEEEECCCCCEEEECCCCHHHCCCCCCCCCHHHHHHHHC
Q ss_conf 8889-88112668886999899984884343221006776289998642
Q gi|254780971|r 171 TNPN-GSLHDIAGVINRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218 (219)
Q Consensus 171 ~NPN-GS~~~IAgi~s~~G~vlgmMPHPER~~~~~~~~~dG~~~f~~~~ 218 (219)
|.| |+ |+||..++..+++.+.|||-+ .+..||..||++++
T Consensus 330 -~~nD~~---iegi~h~~~p~~~VQfHPEa~----~gp~d~~~lf~~F~ 370 (379)
T 1a9x_B 330 -SLFDGT---LQGIHRTDKPAFSFQGNPEAS----PGPHDAAPLFDHFI 370 (379)
T ss_dssp -ETTTCC---EEEEEESSSSEEEESSCTTCS----SSCSTTTHHHHHHH
T ss_pred -ECCCCE---EEEEEECCCCEEEECCCCCCC----CCCCCHHHHHHHHH
T ss_conf -799994---998998999889974699899----87425699999999
No 30
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.73 E-value=5.4e-08 Score=70.56 Aligned_cols=98 Identities=19% Similarity=0.262 Sum_probs=70.5
Q ss_pred EEEEEECCCCCCHHHH---HHHHHHHCCCCEEEEECCC----------------------CCCCCCCEEEECCCCCCCCC
Q ss_conf 6899844970647999---9999985499639982154----------------------64456478997287345431
Q gi|254780971|r 2 KTAIVQIPGLNRDNDM---IKAITKIIGQSPILVWQSD----------------------TDIPDVDLIVIPGGFSYGDY 56 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~---~~A~~~~~~~~~~~v~~~~----------------------~~l~~~d~lvipGGFSygD~ 56 (219)
|||||.++|.+ +.|. ..+|.+ .|....++...+ ...++||.+++|||+..-+.
T Consensus 4 kVavl~~~~~~-~~e~~~~~~~f~~-~g~~~~v~sv~~~~~v~~~~G~~v~~d~~l~~~~~~~~~~D~liipGG~~~~~~ 81 (175)
T 3cne_A 4 KVAVLAVNPVN-GCGLFQYLEAFFE-NGISYKVFAVSDTKEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCGDAVPVF 81 (175)
T ss_dssp EEEEEECSSBC-HHHHHHHHHHHHH-TTCEEEEEESSSSSEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECCTTGGGG
T ss_pred EEEEEECCCCE-EHHHHHHHHHHHH-CCCEEEEEEECCCCCEECCCCCEEECCEEHHHCCCCCCCCCEEEECCCCCCHHC
T ss_conf 79999489948-4689999999997-899299999889997776999889524224314677567788999997770122
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 140677520021212233220597178606403101000001011
Q gi|254780971|r 57 LRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 57 l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
.+......+..+.+.++++.++++++.+||+|-.+|.+.|||.|.
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~g~~i~aiC~g~~~La~agll~g~ 126 (175)
T 3cne_A 82 QQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFTGITKGK 126 (175)
T ss_dssp GGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTTTTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCC
T ss_conf 655444369999999999998499899988205889976998997
No 31
>1g2i_A Protease I; intracellular protease, ATP-independent intracellular protease, catalytical triad, PFPI, cysteine protease, nucleophIle elbow; 2.00A {Pyrococcus horikoshii} SCOP: c.23.16.2
Probab=98.72 E-value=5.4e-08 Score=70.57 Aligned_cols=93 Identities=23% Similarity=0.391 Sum_probs=69.2
Q ss_pred CEEEEEECCCCCCHHHHH---HHHHHHCCCCEEEEECC-------------------CCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 968998449706479999---99998549963998215-------------------46445647899728734543114
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMI---KAITKIIGQSPILVWQS-------------------DTDIPDVDLIVIPGGFSYGDYLR 58 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~---~A~~~~~~~~~~~v~~~-------------------~~~l~~~d~lvipGGFSygD~l~ 58 (219)
|||+|+.++|.. |.|.. ..|.+ .|+++.++-.+ +.+.++||+|++|||..
T Consensus 1 MkI~il~~~gf~-~~E~~~~~~~l~~-~g~~v~~vs~~~~~v~~~~g~~v~~d~~l~~~~~~~~d~liipGG~~------ 72 (166)
T 1g2i_A 1 MKVLFLTANEFE-DVELIYPYHRLKE-EGHEVYIASFERGTITGKHGYSVKVDLTFDKVNPEEFDALVLPGGRA------ 72 (166)
T ss_dssp CEEEEECCTTBC-HHHHHHHHHHHHH-TTCEEEEEESSSEEEECTTSCEEEECEEGGGCCGGGCSEEEECCBSH------
T ss_pred CEEEEEECCCCC-HHHHHHHHHHHHH-CCCEEEEEECCCCEEECCCCCEEECCCCHHHCCCCCCCEEEECCCCC------
T ss_conf 989999589858-9999999999998-89989999289864874899579537557897920087899846530------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 0677520021212233220597178606403101000001011
Q gi|254780971|r 59 CGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 59 aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
+........+.+.++++.++++++.+||+|..+|.+.|||.|.
T Consensus 73 ~~~~~~~~~l~~~l~~~~~~~k~i~aic~g~~~La~aGlL~g~ 115 (166)
T 1g2i_A 73 PERVRLNEKAVSIARKMFSEGKPVASICHGPQILISAGVLRGR 115 (166)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCCEEEETTTTHHHHHHTCCTTC
T ss_pred HHHHCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCC
T ss_conf 4442158788999999986499998336188999974512897
No 32
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, midwest center for structural genomics; 1.70A {Agrobacterium tumefaciens str} SCOP: c.23.16.2
Probab=98.53 E-value=1.9e-07 Score=67.04 Aligned_cols=92 Identities=23% Similarity=0.341 Sum_probs=67.7
Q ss_pred EEEEEECCCCCCHHH---HHHHHHHHCCCCEEEEECC-------------------CCCCCCCCEEEECCCCCCCCCCCH
Q ss_conf 689984497064799---9999998549963998215-------------------464456478997287345431140
Q gi|254780971|r 2 KTAIVQIPGLNRDND---MIKAITKIIGQSPILVWQS-------------------DTDIPDVDLIVIPGGFSYGDYLRC 59 (219)
Q Consensus 2 kvaVl~~pGsNcd~e---~~~A~~~~~~~~~~~v~~~-------------------~~~l~~~d~lvipGGFSygD~l~a 59 (219)
||+||.++|-. |.| ++.++.+..++++.++..+ +...++||.|++|||...
T Consensus 3 kvaill~~gf~-~~E~~~~~~~l~~~~g~~v~~~s~~~~~V~~~~G~~i~~d~~l~~~~~~~yD~lvipGG~~~------ 75 (188)
T 2fex_A 3 RIAIALAQDFA-DWEPALLAAAARSYLGVEIVHATPDGMPVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLSW------ 75 (188)
T ss_dssp EEEEECCTTBC-TTSSHHHHHHHHHHSCCEEEEEETTSSCEECTTCCEEECSEEGGGCCTTTCSEEEECCBSHH------
T ss_pred EEEEEECCCHH-HHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCEEEECCCHHHCCHHHCCEEEECCCCCH------
T ss_conf 89999789832-99999999996021891899995899957889998897066858889625588996698711------
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 677520021212233220597178606403101000001011
Q gi|254780971|r 60 GAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 60 G~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
.......+.+.++++.++++++.+||+|-.+|.+.|||.|.
T Consensus 76 -~~~~~~~l~~~lr~~~~~~~~i~aiC~g~~~La~aGlL~g~ 116 (188)
T 2fex_A 76 -EKGTAADLGGLVKRFRDRDRLVAGICAAASALGGTGVLNDV 116 (188)
T ss_dssp -HHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHHTTTTTTS
T ss_pred -HCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHCCCCCCC
T ss_conf -00379999999999997399899828788999985885894
No 33
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=98.52 E-value=3.8e-07 Score=65.14 Aligned_cols=91 Identities=21% Similarity=0.432 Sum_probs=66.5
Q ss_pred EEEEEECCCCCCHHHHH---HHHHHHCCCCEEEEECC---------------------CCCCCCCCEEEECCCCCCCCCC
Q ss_conf 68998449706479999---99998549963998215---------------------4644564789972873454311
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMI---KAITKIIGQSPILVWQS---------------------DTDIPDVDLIVIPGGFSYGDYL 57 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~---~A~~~~~~~~~~~v~~~---------------------~~~l~~~d~lvipGGFSygD~l 57 (219)
||+||.++|.+ |.|.. ..|.+ +|.++.++-.. +.+..+||+|++|||+.
T Consensus 25 kVaill~dgf~-~~E~~~p~~~l~~-aG~~v~~vs~~~~~~v~~~~g~~~v~~d~~l~dv~~~~yDaliiPGG~~----- 97 (193)
T 1oi4_A 25 KIAVLITDEFE-DSEFTSPADEFRK-AGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHS----- 97 (193)
T ss_dssp EEEEECCTTBC-THHHHHHHHHHHH-TTCEEEEEESSTTCEEECTTSSCEEECCEEGGGCCGGGCSEEEECCBTH-----
T ss_pred EEEEEECCCCC-HHHHHHHHHHHHH-CCCEEEEEECCCCCCEEECCCCEEEECCCCHHHCCHHHCCEEEECCCCC-----
T ss_conf 79999579762-9999999999996-8998999967999744737899789557738998962493999899830-----
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHH
Q ss_conf 4067752002121223322059717860640310100000101
Q gi|254780971|r 58 RCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPG 100 (219)
Q Consensus 58 ~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg 100 (219)
+-.......+.+.+++|.++++++-+||.|-.+|.+.|||.|
T Consensus 98 -~~~l~~~~~l~~~l~~~~~~~k~i~aIC~g~~~La~aGlL~G 139 (193)
T 1oi4_A 98 -PDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRG 139 (193)
T ss_dssp -HHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHHTCCTT
T ss_pred -HHHHHHCHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCCCC
T ss_conf -867631958899999988606603404707899987787899
No 34
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A 2rk6_A ...
Probab=98.51 E-value=4.7e-07 Score=64.60 Aligned_cols=92 Identities=15% Similarity=0.267 Sum_probs=66.5
Q ss_pred EEEEEECCCCCCHHHHH---HHHHHHCCCCEEEEECCCC---------------------CCCCCCEEEECCCCCCCCCC
Q ss_conf 68998449706479999---9999854996399821546---------------------44564789972873454311
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMI---KAITKIIGQSPILVWQSDT---------------------DIPDVDLIVIPGGFSYGDYL 57 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~---~A~~~~~~~~~~~v~~~~~---------------------~l~~~d~lvipGGFSygD~l 57 (219)
|++|+.++|.. |.|.. ..|. .+++++.++.-.+. ...+||+|++|||.-.
T Consensus 5 Kvlill~dGf~-~~E~~~p~~~L~-~ag~~v~v~s~~~~~~v~~~~g~~v~~d~~~~~~~~~~~yD~lvIpGG~~~---- 78 (197)
T 2rk3_A 5 RALVILAKGAE-EMETVIPVDVMR-RAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLG---- 78 (197)
T ss_dssp EEEEEECTTCC-HHHHHHHHHHHH-HTTCEEEEEETTCSSCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHH----
T ss_pred EEEEEECCCCC-HHHHHHHHHHHH-HCCCEEEEEECCCCCCEECCCCCEECCCCCHHHCCCCCCCEEEEECCCCCH----
T ss_conf 99999489977-999999999999-789989999868997177279968826775776676779709998599703----
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHH
Q ss_conf 4067752002121223322059717860640310100000101
Q gi|254780971|r 58 RCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPG 100 (219)
Q Consensus 58 ~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg 100 (219)
+-.......+.+.++++.++++++.+||+|-.+|.+.|||.|
T Consensus 79 -~~~l~~~~~l~~~i~~~~~~~k~i~aiC~G~~~La~agll~g 120 (197)
T 2rk3_A 79 -AQNLSESAAVKEILKEQENRKGLIATICAGPTALLAHEIGFG 120 (197)
T ss_dssp -HHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTT
T ss_pred -HHHHCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCC
T ss_conf -867445999999999987449689600717899998799776
No 35
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=98.49 E-value=4.6e-07 Score=64.66 Aligned_cols=93 Identities=23% Similarity=0.399 Sum_probs=67.7
Q ss_pred EEEEEECCCCCCHHHHH---HHHHHHCCCCEEEEECC------------------------CCCCCCCCEEEECCCCCCC
Q ss_conf 68998449706479999---99998549963998215------------------------4644564789972873454
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMI---KAITKIIGQSPILVWQS------------------------DTDIPDVDLIVIPGGFSYG 54 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~---~A~~~~~~~~~~~v~~~------------------------~~~l~~~d~lvipGGFSyg 54 (219)
||+||.++|.. +.|.. .+|.+ .|.++.++..+ +.++++||+|++|||...
T Consensus 11 kVail~~~g~~-~~E~~~~~~~l~~-ag~~v~~vs~~~~~v~~~~g~~~~~~~~~~d~~l~~~~~~~yDaliipGG~~~- 87 (190)
T 2vrn_A 11 KIAILAADGVE-EIELTSPRAAIEA-AGGTTELISLEPGEIQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTVN- 87 (190)
T ss_dssp EEEEECCTTCB-HHHHHHHHHHHHH-TTCEEEEEESSSSEEEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTHH-
T ss_pred EEEEEECCCCC-HHHHHHHHHHHHH-CCCEEEEEECCCCEEEEECCCCCCCEEEECCCCHHHCCHHHCEEEEECCCCCC-
T ss_conf 99999269958-9999999999997-89999999647981798526524651676466578889747649992687762-
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 31140677520021212233220597178606403101000001011
Q gi|254780971|r 55 DYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 55 D~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
+........+.+.++++.++++++.+||.|-++|.+.|||.|.
T Consensus 88 ----~~~l~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~gr 130 (190)
T 2vrn_A 88 ----PDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSETGIAQGL 130 (190)
T ss_dssp ----HHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHTTTTTTC
T ss_pred ----HHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf ----2121028899999999875277400334289999977987798
No 36
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI- like and ferritin-like domains; YP_324989.1, structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.49 E-value=5.7e-07 Score=64.03 Aligned_cols=93 Identities=24% Similarity=0.424 Sum_probs=67.5
Q ss_pred CEEEEEECCCCCCHHHH---HHHHHHHCCCCEEEEECCC---------------------CCCCCCCEEEECCCCCCCCC
Q ss_conf 96899844970647999---9999985499639982154---------------------64456478997287345431
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDM---IKAITKIIGQSPILVWQSD---------------------TDIPDVDLIVIPGGFSYGDY 56 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~---~~A~~~~~~~~~~~v~~~~---------------------~~l~~~d~lvipGGFSygD~ 56 (219)
.||+||.++|.+ +.|. ..+|.+ +|+++.++-... ....+||+|++|||..
T Consensus 11 KKVaILl~dGfe-~~E~~~P~evL~~-AG~eV~ivs~~~g~~v~~s~g~l~i~~D~~l~dv~~~dyDaLIIPGG~~---- 84 (365)
T 3fse_A 11 KKVAILIEQAVE-DTEFIIPCNGLKQ-AGFEVVVLGSRMNEKYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGMA---- 84 (365)
T ss_dssp CEEEEECCTTBC-HHHHHHHHHHHHH-TTCEEEEEESSSSCCEECTTSCCEECCSEETTTCCGGGCSEEEECCBTH----
T ss_pred CEEEEEECCCCC-HHHHHHHHHHHHH-CCCEEEEEECCCCCCEEECCCCEEEECCCCHHHCCCCCCCEEEECCCCC----
T ss_conf 989999089872-9999999999998-8998999977999825626996577477866767812482899889855----
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 140677520021212233220597178606403101000001011
Q gi|254780971|r 57 LRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 57 l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
+-.......+.+.++++.+.++++.+||.|-++|.+.|||.|.
T Consensus 85 --~~~~~~d~~l~~lIr~~~~~gk~I~aIC~G~~lLA~AGLL~Gr 127 (365)
T 3fse_A 85 --PDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIEGDLLRGK 127 (365)
T ss_dssp --HHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCCTTC
T ss_pred --HHHHCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCC
T ss_conf --7665328688999999998498798855789999977976998
No 37
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3nor_A* 3nov_A
Probab=98.42 E-value=1e-06 Score=62.44 Aligned_cols=94 Identities=23% Similarity=0.447 Sum_probs=63.9
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECC--------------C---CCCCCCCEEEECCCCCCCCCCCHH
Q ss_conf 9689984497064799999999854---9963998215--------------4---644564789972873454311406
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKII---GQSPILVWQS--------------D---TDIPDVDLIVIPGGFSYGDYLRCG 60 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~---~~~~~~v~~~--------------~---~~l~~~d~lvipGGFSygD~l~aG 60 (219)
|||+||.+||.+ ..|..-.++-+. .+...++..+ + .+++++|.|++|||+. .-
T Consensus 6 ~rI~ill~~g~~-~~~~~~~~evl~~a~~~~~~~vs~~~~~V~~s~G~~i~~d~~~~~~~~~D~liVpgg~~------~~ 78 (231)
T 3noq_A 6 VQIGFLLFPEVQ-QLDLTGPHDVLASLPDVQVHLIWKEPGPVVASSGLVLQATTSFADCPPLDVICIPGGTG------VG 78 (231)
T ss_dssp EEEEEECCTTCC-HHHHHHHHHHHTTSTTEEEEEEESSSEEEECTTSCEEEECEETTTCCCCSEEEECCSTT------HH
T ss_pred EEEEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCEEECCCCHHHCCCCCEEECCCCCC------CC
T ss_conf 799999839780-99999999999708897799997489827817998794586854567358896378765------43
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 77520021212233220597178606403101000001011
Q gi|254780971|r 61 AIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 61 ~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
.......+.+-++++.++|+.+.+||+|..+|.+.|||.|.
T Consensus 79 ~~~~~~~l~~~l~~~~~~g~~i~~ic~G~~~La~aGlL~g~ 119 (231)
T 3noq_A 79 ALMEDPQALAFIRQQAARARYVTSVSTGSLVLGAAGLLQGK 119 (231)
T ss_dssp HHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTTTTTC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCC
T ss_conf 44689999999998876197896125311247645777997
No 38
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=98.36 E-value=1.6e-06 Score=61.12 Aligned_cols=93 Identities=19% Similarity=0.354 Sum_probs=66.8
Q ss_pred EEEEEECCCCCCHHHHH---HHHHHHCCCCEEEEECC----------------------CCCCCCCCEEEECCCCCCCCC
Q ss_conf 68998449706479999---99998549963998215----------------------464456478997287345431
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMI---KAITKIIGQSPILVWQS----------------------DTDIPDVDLIVIPGGFSYGDY 56 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~---~A~~~~~~~~~~~v~~~----------------------~~~l~~~d~lvipGGFSygD~ 56 (219)
||+|+.+||. .|.|.. ..|.+ ++.++.++--. +...++||.|++|||+...+.
T Consensus 4 ~vlv~l~~Gf-e~~E~~~p~dvL~r-ag~~v~~~s~~~~~~~~V~~~~g~~i~~d~~~~d~~~~d~D~liiPGG~~~~~~ 81 (205)
T 2ab0_A 4 SALVCLAPGS-EETEAVTTIDLLVR-GGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAEC 81 (205)
T ss_dssp EEEEEECTTC-CHHHHHHHHHHHHH-TTCEEEEEECSSTTCCEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHH
T ss_pred EEEEEECCCC-HHHHHHHHHHHHHH-CCCEEEEEEEECCCCCEEEECCCCEEECCCCHHHCCCCCCCEEEECCCCHHHHH
T ss_conf 3999955991-09999999999998-899899997717998458937998891688878899568738998999717988
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC-HHHHEECCCHHHH
Q ss_conf 14067752002121223322059717860640-3101000001011
Q gi|254780971|r 57 LRCGAIAARTPVMQAIKKKAQQGIKVMGICNG-FQILVELNLLPGI 101 (219)
Q Consensus 57 l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNG-fQiL~elGLlPg~ 101 (219)
+.....+.+.++++.++++++.+||.| ..+|.+.|||.|.
T Consensus 82 -----l~~~~~l~~~lr~~~~~gk~i~aiC~gpa~lLa~aGLL~gr 122 (205)
T 2ab0_A 82 -----FRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIG 122 (205)
T ss_dssp -----HHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSS
T ss_pred -----HHHCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCC
T ss_conf -----61299999999999873530450146189999867876998
No 39
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=98.30 E-value=2.4e-06 Score=60.06 Aligned_cols=94 Identities=17% Similarity=0.244 Sum_probs=68.4
Q ss_pred EEEEEECCCCCCHH--HHHHHHHHHCCCCEEEEECC-------------------CCCCCCCCEEEECCCCCCCCCCCHH
Q ss_conf 68998449706479--99999998549963998215-------------------4644564789972873454311406
Q gi|254780971|r 2 KTAIVQIPGLNRDN--DMIKAITKIIGQSPILVWQS-------------------DTDIPDVDLIVIPGGFSYGDYLRCG 60 (219)
Q Consensus 2 kvaVl~~pGsNcd~--e~~~A~~~~~~~~~~~v~~~-------------------~~~l~~~d~lvipGGFSygD~l~aG 60 (219)
|||||...|..-.. ....+|++ +|..+.++--+ +....+||+||+|||.---|
T Consensus 536 KVaILvadGfEe~E~~~~~~~L~~-aG~~V~vV~~~~g~v~~~~G~~v~~D~t~~~v~~~~yDalvvPGG~~~~d----- 609 (715)
T 1sy7_A 536 RVAIIIADGYDNVAYDAAYAAISA-NQAIPLVIGPRRSKVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAE----- 609 (715)
T ss_dssp EEEEECCTTBCHHHHHHHHHHHHH-TTCEEEEEESCSSCEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHH-----
T ss_pred EEEEEECCCCCHHHHHHHHHHHHH-CCCEEEEEECCCCCEECCCCCEEECCCCCCCCCHHHCCEEEECCCCCCHH-----
T ss_conf 799981687348999999999997-79967998567663774899878266001559852489899889953588-----
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 77520021212233220597178606403101000001011
Q gi|254780971|r 61 AIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 61 ~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
.+.....+.+.|+++.+.+++|-.||.|-|+|.+.|+|+|.
T Consensus 610 ~L~~~~~a~~fvr~~~~~gKpIaAIC~ap~lL~~AglL~Gr 650 (715)
T 1sy7_A 610 TLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIALPQV 650 (715)
T ss_dssp HHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHCCTTS
T ss_pred HHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCC
T ss_conf 76128789999999997699799978639999971875784
No 40
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), homoserine O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=98.29 E-value=4e-06 Score=58.60 Aligned_cols=137 Identities=12% Similarity=0.097 Sum_probs=81.0
Q ss_pred CCCCCCEEEECCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEE-C-CCHHHHHCCCCCCCEE
Q ss_conf 44564789972873----4543114067752002121223322059717860640310100-0-0010110124433245
Q gi|254780971|r 38 DIPDVDLIVIPGGF----SYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVE-L-NLLPGILMRNCSLKFV 111 (219)
Q Consensus 38 ~l~~~d~lvipGGF----SygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~e-l-GLlPg~l~~N~s~rf~ 111 (219)
+..+||++|+-|+= .|.|+- ....+.+-+....+..+++||||=|.|++.. + |...-.+..-..|-|.
T Consensus 108 ~~~~yDGlIITGAPve~~~fedv~------yw~eL~~ii~wa~~~~~s~LgICwGaQa~~~~l~Gi~k~~~~~K~~GV~~ 181 (312)
T 2h2w_A 108 KDRKFDGFIITGAPVELLPFEEVD------YWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPKYELPQKLSGVYK 181 (312)
T ss_dssp TTCCEEEEEECCCSCTTSCGGGST------THHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEEEEEEEEEE
T ss_pred HHCCCCEEEEECCCCCCCCCCCCH------HHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEE
T ss_conf 125676799827976667600063------89999999999997099848773999999999679853268887899998
Q ss_pred EEEEEEEECCCHHHHHHHCCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEE
Q ss_conf 42257675252357764137996899862013302330867741154225036531688888988112668886999899
Q gi|254780971|r 112 CKQVLLEVVNSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVL 191 (219)
Q Consensus 112 ~r~~~~~v~~~~s~~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vl 191 (219)
. ++. .++++++++. +.+.+|.+|.. .+..+.++...+ ...+-..+ ...+..+.+.++|++
T Consensus 182 ~-----~l~-~~~pll~g~~--d~f~vPhSR~~---~v~~d~v~~~p~--l~vLa~S~-------~~g~~~~~~~~~r~l 241 (312)
T 2h2w_A 182 H-----RVA-KDSVLFRGHD--DFFWAPHSRYT---EVKKEDIDKVPE--LEILAESD-------EAGVYVVANKSERQI 241 (312)
T ss_dssp E-----EES-SCCGGGTTCC--SEEEEEEEEEE---ECCHHHHTTCC---CEEEEEET-------TTEEEEEECSSSSEE
T ss_pred E-----EEC-CCCCCCCCCC--CCCCCCEEECC---EECHHHHHCCCC--CEEEEECC-------CCCCEEEEECCCCEE
T ss_conf 7-----863-7874335887--52242124412---114988740897--44666258-------884189996799989
Q ss_pred EECCCCHHH
Q ss_conf 984884343
Q gi|254780971|r 192 GMMPHPENI 200 (219)
Q Consensus 192 gmMPHPER~ 200 (219)
.++.|||-.
T Consensus 242 ~iQGHPEYd 250 (312)
T 2h2w_A 242 FVTGHPEYD 250 (312)
T ss_dssp EECSCTTCC
T ss_pred EEECCCCCC
T ss_conf 995887778
No 41
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=98.25 E-value=2.6e-06 Score=59.86 Aligned_cols=94 Identities=12% Similarity=0.252 Sum_probs=63.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHH--HCCC--CEEEEECC-----------------CCCCCCCCEEEECCCCCCCCCCCH
Q ss_conf 96899844970647999999998--5499--63998215-----------------464456478997287345431140
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITK--IIGQ--SPILVWQS-----------------DTDIPDVDLIVIPGGFSYGDYLRC 59 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~--~~~~--~~~~v~~~-----------------~~~l~~~d~lvipGGFSygD~l~a 59 (219)
.||+||.|||.+ +.|.+..++- .+.. +..++..+ ..+.+++|.|++|||+. +
T Consensus 5 ~rIaill~~gf~-~le~~~~~evl~~~~~~~~v~~vs~~~~~v~ss~G~~i~~~~~~~d~~~~D~livpGG~~------~ 77 (211)
T 3mgk_A 5 YRIDVLLFNKFE-TLDVFGPVEIFGNLQDDFELNFISSDGGLVESSQKVRVETSLYTRDENIEKILFVPGGSG------T 77 (211)
T ss_dssp EEEEEECCTTCC-HHHHHHHHHHHTTCTTTEEEEEECSSCEEEECTTCCEEEEBCCCCCSSSEEEEEECCSTH------H
T ss_pred EEEEEEECCCCH-HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCEEEECCCCCCCCCCCCEEEECCCCC------H
T ss_conf 599999849880-999999999998099996799997789748832997995565533356279999878877------4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 677520021212233220597178606403101000001011
Q gi|254780971|r 60 GAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 60 G~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
-.......+.+.|+++.++++++.+||.|-++|.+.|||.|.
T Consensus 78 ~~~~~~~~l~~~Lr~~~~~~~~i~aic~G~~~LA~aGlL~g~ 119 (211)
T 3mgk_A 78 REKVNDDNFINFIGNMVKESKYIISVCTGSALLSKAGILNGK 119 (211)
T ss_dssp HHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHHTTTTTTS
T ss_pred HHHCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCC
T ss_conf 544389999999998875245885001035789751767898
No 42
>3efe_A THIJ/PFPI family protein; structural genomics, csgid, center for structural genomics of infectious diseases, chaperone; 2.30A {Bacillus anthracis}
Probab=98.25 E-value=2.2e-06 Score=60.31 Aligned_cols=92 Identities=20% Similarity=0.367 Sum_probs=63.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHH----------CCCCEEEEECC-------------------CCCCCCCCEEEECCCCC
Q ss_conf 68998449706479999999985----------49963998215-------------------46445647899728734
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITKI----------IGQSPILVWQS-------------------DTDIPDVDLIVIPGGFS 52 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~~----------~~~~~~~v~~~-------------------~~~l~~~d~lvipGGFS 52 (219)
||+++.++|-- |.|...++..+ .+++...+-.+ +...++||.|++|||..
T Consensus 7 kv~ilv~dgf~-d~E~~~~~~~L~~~~~~~~~~~~~~v~~v~~~~~~V~s~~G~~v~~d~~l~~~~~~~~D~liipGG~~ 85 (212)
T 3efe_A 7 KAFLYVFNTMS-DWEYGYLIAELNSGRYFKKDLAPLKVITVGANKEMITTMGGLRIKPDISLDECTLESKDLLILPGGTT 85 (212)
T ss_dssp CEEEEECTTCC-TTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSCCEECTTCCEECCSEEGGGCCCCTTCEEEECCCSC
T ss_pred EEEEEECCCCC-HHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEECCCCHHHCCHHHCCEEEECCCCC
T ss_conf 89999779731-88899999998244422257898799999889995885899889467665878962499999889973
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 5431140677520021212233220597178606403101000001011
Q gi|254780971|r 53 YGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 53 ygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
+.+.+ ..++.+.++++.++++++.+||.|-++|.+.|||.|.
T Consensus 86 ~~~~~-------~~~l~~~l~~~~~~g~~i~aic~G~~~La~aGlL~g~ 127 (212)
T 3efe_A 86 WSEEI-------HQPILERIGQALKIGTIVAAICGATDALANMGYLDTR 127 (212)
T ss_dssp TTSGG-------GHHHHHHHHHHHHHTCEEEEETHHHHHHHHTTTTSSS
T ss_pred HHHCC-------CHHHHHHHHHHHHHCCEEEEECCHHHHHHHCCCCCCC
T ss_conf 11106-------9999999999988099999865156999976887998
No 43
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=98.21 E-value=6.2e-06 Score=57.42 Aligned_cols=96 Identities=19% Similarity=0.294 Sum_probs=66.0
Q ss_pred EEEEEEC-----CCCCCHHHHH---HHHHHHCCCCEEEEEC-------------------------------------CC
Q ss_conf 6899844-----9706479999---9999854996399821-------------------------------------54
Q gi|254780971|r 2 KTAIVQI-----PGLNRDNDMI---KAITKIIGQSPILVWQ-------------------------------------SD 36 (219)
Q Consensus 2 kvaVl~~-----pGsNcd~e~~---~A~~~~~~~~~~~v~~-------------------------------------~~ 36 (219)
||+||-- .|+ .+.|.. .+|.+ +|.++.++-- ++
T Consensus 8 KvaviLsg~g~~DG~-E~~E~~~p~~~L~r-aG~~V~~~sp~~~~~~~~~h~~~~~~~~~~~~~~~~~~i~~~~~~~l~~ 85 (232)
T 1vhq_A 8 KIGVILSGCGVYDGS-EIHEAVLTLLAISR-SGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQ 85 (232)
T ss_dssp EEEEECCSBSTTTSB-CHHHHHHHHHHHHH-TTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGG
T ss_pred EEEEEECCCCCCCCH-HHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCHHH
T ss_conf 599996688787750-29899999999998-8997999957998553122567860134233352002153015676668
Q ss_pred CCCCCCCEEEECCCCCCCCCCCHHHHH-----HHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHH
Q ss_conf 644564789972873454311406775-----200212122332205971786064031010000010
Q gi|254780971|r 37 TDIPDVDLIVIPGGFSYGDYLRCGAIA-----ARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLP 99 (219)
Q Consensus 37 ~~l~~~d~lvipGGFSygD~l~aG~i~-----~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlP 99 (219)
.+..+||+|+||||+.-.+.|+..+.. .+..+.+.+++|.++++|+-.||.|-++|.+.+.+.
T Consensus 86 v~~~dyD~lviPGG~g~~~~L~~~~~~~~~~~~~~~v~~~i~~~~~~~K~iaaIC~ap~~La~~~~~~ 153 (232)
T 1vhq_A 86 ADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFP 153 (232)
T ss_dssp CCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHHCSSC
T ss_pred CCHHHCCEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCC
T ss_conf 89412888997899542888654002464333399999999999986997999886699999985658
No 44
>3bhn_A THIJ/PFPI domain protein; YP_001094981.1, DJ-1 like protein, DJ-1/PFPI family, structural genomics, joint center for structural genomics; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=98.17 E-value=7.8e-06 Score=56.77 Aligned_cols=93 Identities=23% Similarity=0.296 Sum_probs=59.1
Q ss_pred EEEEEECCCCCCHHHHHHHHH--HHCCCCEEE-EECC--------------C---CCCCCCCEEEECCCCCCCCCCCHHH
Q ss_conf 689984497064799999999--854996399-8215--------------4---6445647899728734543114067
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAIT--KIIGQSPIL-VWQS--------------D---TDIPDVDLIVIPGGFSYGDYLRCGA 61 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~--~~~~~~~~~-v~~~--------------~---~~l~~~d~lvipGGFSygD~l~aG~ 61 (219)
||+|+.++|.+ +.|...+++ +.++....+ +... + .+++++|.+++|||+.-- .
T Consensus 22 rV~ill~dgf~-~~e~~~~~evl~~a~~~~~v~~~~~~~~V~ss~G~~i~~d~~~~d~~~~D~liVpGG~~~~------~ 94 (236)
T 3bhn_A 22 KVGIVLFDDFT-DVDFFLMNDLLGRTSDSWTVRILGTKPEHHSQLGMTVKTDGHVSEVKEQDVVLITSGYRGI------P 94 (236)
T ss_dssp EEEEECCTTBC-HHHHHHHHHHHTTCSSSEEEEEEESSSEEEBTTCCEEECSEEGGGGGGCSEEEECCCTTHH------H
T ss_pred EEEEEECCCCC-HHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCEEECCCCHHHCCCCCEEEECCCCCCH------H
T ss_conf 89999719955-8999999999980999789999779998775799689616784666725889977887630------3
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 7520021212233220597178606403101000001011
Q gi|254780971|r 62 IAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 62 i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
.....+....+.++.++++++.+||.|-.+|.+.|||.|.
T Consensus 95 ~~~~~~~l~~~lr~~~~~~~v~aiC~G~~~LA~aGlL~g~ 134 (236)
T 3bhn_A 95 AALQDENFMSALKLDPSRQLIGSICAGSFVLHELGLLKGK 134 (236)
T ss_dssp HHHTCHHHHHHCCCCTTTCEEEEETTHHHHHHHTTTTTTC
T ss_pred HCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCC
T ss_conf 0158999999999745599899986366899975898998
No 45
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=98.16 E-value=6.9e-06 Score=57.10 Aligned_cols=97 Identities=11% Similarity=0.145 Sum_probs=64.2
Q ss_pred CEEEEEECCCCC-----CHHHHHHHHHHHCCCCE---EEEECC--------------C---CCCCCCCEEEECCCCCCCC
Q ss_conf 968998449706-----47999999998549963---998215--------------4---6445647899728734543
Q gi|254780971|r 1 MKTAIVQIPGLN-----RDNDMIKAITKIIGQSP---ILVWQS--------------D---TDIPDVDLIVIPGGFSYGD 55 (219)
Q Consensus 1 mkvaVl~~pGsN-----cd~e~~~A~~~~~~~~~---~~v~~~--------------~---~~l~~~d~lvipGGFSygD 55 (219)
|||+||-+||.- .-.|+.++-..+.+... .++..+ + .+.+..|.+++|||+.-
T Consensus 9 ~ri~iL~~~g~~~~~l~~~~evl~~an~~~~~~~~~~~~vs~~g~~V~s~~G~~v~~d~~l~~~~~~Dilivpg~~~~-- 86 (209)
T 3er6_A 9 LRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNRPLIGRGGISVQPTAQWQSFDFTNILIIGSIGDP-- 86 (209)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSSCEEETTTEEEECSSCGGGCSCCSEEEECCCSCH--
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEECCCCHHHCCCCCEEEECCCCCC--
T ss_conf 489999789964888999999999999755788869999976999897079988952778356471037764246776--
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 1140677520021212233220597178606403101000001011
Q gi|254780971|r 56 YLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 56 ~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
+. ........+.+-|+++.+++.++.+||+|..+|.+.|||.|.
T Consensus 87 -~~-~~~~~~~~l~~~L~~~~~~g~~i~aic~Ga~~LA~aGlL~g~ 130 (209)
T 3er6_A 87 -LE-SLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKAGLLQQN 130 (209)
T ss_dssp -HH-HGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHTCCSSC
T ss_pred -CC-CCCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCC
T ss_conf -41-223489999999999987498898413789999861787997
No 46
>3ewn_A THIJ/PFPI family protein; monomer, PSI-II, nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=98.15 E-value=6.4e-06 Score=57.35 Aligned_cols=94 Identities=21% Similarity=0.360 Sum_probs=64.4
Q ss_pred EEEEEECCCCCCHHHHH---HHHHHHCCCCEEEEECCC-----------------CC-CCCCCEEEECCCCCCCCCCCHH
Q ss_conf 68998449706479999---999985499639982154-----------------64-4564789972873454311406
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMI---KAITKIIGQSPILVWQSD-----------------TD-IPDVDLIVIPGGFSYGDYLRCG 60 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~---~A~~~~~~~~~~~v~~~~-----------------~~-l~~~d~lvipGGFSygD~l~aG 60 (219)
||+||.|||.+ ..|.+ ..|.++.+.+..++-.+. .+ ..++|.|++|||.. ..-
T Consensus 25 rI~ill~~Gf~-~ld~~gp~~vl~~~~~~~v~~vs~~~~pV~ss~G~~i~~d~~l~~~~~~~d~lvvpGG~~-----~~~ 98 (253)
T 3ewn_A 25 QIAMLVYPGMT-VMDLVGPHCMFGSLMGAKIYIVAKSLDPVTSDAGLAIVPTATFGTCPRDLTVLFAPGGTD-----GTL 98 (253)
T ss_dssp EEEEECCTTBC-HHHHHHHHHHHTTSTTCEEEEEESSSSCEECTTSCEECCSEETTTSCSSCSEEEECCBSH-----HHH
T ss_pred EEEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCEEECCCCCCCCCCCCEEEEECCCCC-----CHH
T ss_conf 89999739971-999999999997189976999987799377179977950566343665687999799862-----142
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 77520021212233220597178606403101000001011
Q gi|254780971|r 61 AIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 61 ~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
..+....+.+.|+++.++++++.+||+|-.+|.+.|||.|.
T Consensus 99 ~~~~~~~l~~~Lr~~~~~g~~i~aiCtG~~~LA~AGLL~Gr 139 (253)
T 3ewn_A 99 AAASDAETLAFMADRGARAKYITSVCSGSLILGAAGLLKGY 139 (253)
T ss_dssp HHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHTTCCTTC
T ss_pred HHCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCC
T ss_conf 32269999999998623165442367652578755866798
No 47
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=98.09 E-value=1.5e-05 Score=54.98 Aligned_cols=173 Identities=14% Similarity=0.178 Sum_probs=96.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCE---EEEECC----------------------CCCCCCCCEEEECCCC----
Q ss_conf 96899844970647999999998549963---998215----------------------4644564789972873----
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSP---ILVWQS----------------------DTDIPDVDLIVIPGGF---- 51 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~---~~v~~~----------------------~~~l~~~d~lvipGGF---- 51 (219)
||++||.-=- -..+|..-|.++.+... .+.+.. +.+-..||++|+-|+=
T Consensus 36 l~I~ilNlMP--~k~~TE~qf~rll~~~~~qv~v~~~~~~~h~~~~~~~~~l~~~y~~~~~i~~~~yDglIITGAPve~~ 113 (301)
T 2vdj_A 36 LKIAILNLMP--TKQETEAQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVETL 113 (301)
T ss_dssp EEEEEECCCS--SHHHHHHHHHHHHTCSSSCEEEEEECCCC------------CCEECHHHHTTSCEEEEEECCCTTTTS
T ss_pred HHHEEECCCC--CHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCC
T ss_conf 0211100689--51889999999856898428999888266258998599999872089986026676799718976667
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEEC--CCHHHHHCCCCCCCEEEEEEEEEECCCHHHHHHH
Q ss_conf 45431140677520021212233220597178606403101000--0010110124433245422576752523577641
Q gi|254780971|r 52 SYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVEL--NLLPGILMRNCSLKFVCKQVLLEVVNSNTAFTKS 129 (219)
Q Consensus 52 SygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~el--GLlPg~l~~N~s~rf~~r~~~~~v~~~~s~~~~~ 129 (219)
.|.|+- ....+.+-+....+..+++||||=|.|++... |...-.+ .+ -.......++....++++++
T Consensus 114 ~fedv~------yw~eL~~ii~wa~~~~~~~LgiCwGaQa~l~~~gGi~k~~~----~~-k~~Gv~~~~~~~~~~pl~~g 182 (301)
T 2vdj_A 114 SFEEVD------YWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPL----KE-KMFGVFEHEVREQHVKLLQG 182 (301)
T ss_dssp CGGGST------THHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEE----EE-EEEEEEEEEECCSSCGGGTT
T ss_pred CCCCCH------HHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCC----CC-EEEEEEEEEECCCCCHHHCC
T ss_conf 623162------89999999999997299836551889999999779432457----87-40686898971688620158
Q ss_pred CCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHH
Q ss_conf 37996899862013302330867741154225036531688888988112668886999899984884343
Q gi|254780971|r 130 YKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHDIAGVINRRGNVLGMMPHPENI 200 (219)
Q Consensus 130 ~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~IAgi~s~~G~vlgmMPHPER~ 200 (219)
+. +...+|.++-. .++.+.+.++.+ ..|.... + ......+.+.++|+++++.|||-.
T Consensus 183 ~~--d~f~~PhSR~~---~i~~d~V~~~p~-l~vla~s-~-------~~g~~~~~~~~~r~~~iqGHPEYd 239 (301)
T 2vdj_A 183 FD--ELFFAVHSRHT---EVRESDIREVKE-LTLLANS-E-------EAGVHLVIGQEGRQVFALGHSEYS 239 (301)
T ss_dssp CC--SEEEEEEEEEE---ECCHHHHHTCTT-EEEEEEE-T-------TTEEEEEEEGGGTEEEECSCTTCC
T ss_pred CC--CCCCCCCCCCC---CCCHHHHHCCCC-CCEEEEC-C-------CCCEEEEEECCCCEEEECCCCCCC
T ss_conf 87--42333202541---226878621897-4055204-7-------773189996787735883786667
No 48
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=98.04 E-value=6.7e-06 Score=57.20 Aligned_cols=91 Identities=19% Similarity=0.267 Sum_probs=63.7
Q ss_pred EEEEEECCCCCCHHHHHHH---HHHHCCCCEEEEECC-----------------CCCCCCCCEEEECCCCCCCCCCCHHH
Q ss_conf 6899844970647999999---998549963998215-----------------46445647899728734543114067
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKA---ITKIIGQSPILVWQS-----------------DTDIPDVDLIVIPGGFSYGDYLRCGA 61 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A---~~~~~~~~~~~v~~~-----------------~~~l~~~d~lvipGGFSygD~l~aG~ 61 (219)
||+++.+||- .|.|..+. +.+..+++...+-.+ +...+++|+||+|||.....
T Consensus 5 kv~~ll~d~f-~d~E~~~~~~~L~~~~~~~v~~vs~~~~V~s~~Gl~i~~d~~~~~~~~~~d~lvlpGG~~~~~------ 77 (206)
T 3f5d_A 5 KALFLILDQY-ADWEGVYLASALNQREDWSVHTVSLDPIVSSIGGFKTSVDYIIGLEPANFNLLVMIGGDSWSN------ 77 (206)
T ss_dssp EEEEECCSSB-CTTTSHHHHHHHHTSTTEEEEEEESSSEEEBTTSCEEECSEETTSSCSCCSEEEECCBSCCCC------
T ss_pred EEEEEECCCC-CHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEECCCHHHCCCCCCCEEEECCCCCCCC------
T ss_conf 8999967996-889999999998356984999994899989579928942510212832131999278776432------
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 7520021212233220597178606403101000001011
Q gi|254780971|r 62 IAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 62 i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
....+.+.++++.++++++.+||.|..+|.+.|||.|.
T Consensus 78 --~~~~l~~~l~~~~~~~~~iaaIC~G~~~La~aGlL~g~ 115 (206)
T 3f5d_A 78 --DNKKLLHFVKTAFQKNIPIAAICGAVDFLAKNGLLNNH 115 (206)
T ss_dssp --CCHHHHHHHHHHHHTTCCEEEETHHHHHHHHTTTTTTS
T ss_pred --CCHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCCCCC
T ss_conf --59999999999986099899628015999976898993
No 49
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics, protein structure initiative; 2.30A {Pseudomonas putida KT2440}
Probab=97.79 E-value=5.9e-05 Score=51.15 Aligned_cols=93 Identities=16% Similarity=0.278 Sum_probs=61.0
Q ss_pred CEEEEEECCCCC-C----HHHHHHHHHHHCCCCEEE--E---------------ECC---CCCCCCCCEEEECCCCCCCC
Q ss_conf 968998449706-4----799999999854996399--8---------------215---46445647899728734543
Q gi|254780971|r 1 MKTAIVQIPGLN-R----DNDMIKAITKIIGQSPIL--V---------------WQS---DTDIPDVDLIVIPGGFSYGD 55 (219)
Q Consensus 1 mkvaVl~~pGsN-c----d~e~~~A~~~~~~~~~~~--v---------------~~~---~~~l~~~d~lvipGGFSygD 55 (219)
+||+||-+||-+ . -.|+.+.-.++.+..-.. + +.. ..+++++|.+++|||+. +
T Consensus 6 ~~i~ill~~gf~~~~~~~~~e~Lr~An~l~~~~~~~~~vS~~g~~v~ss~G~~i~~~~~~~~~~~~~d~lvv~gg~~--~ 83 (202)
T 3gra_A 6 YRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGDRVLSDLGLELVATELSAAALKELDLLVVCGGLR--T 83 (202)
T ss_dssp EEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSSEEEBTTSCEEECEECCSGGGTTCSEEEEECCTT--C
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEECCCCCHHHCCCCCEEEECCCCC--C
T ss_conf 49999997987288899999999998753698479999986899057069976861467711266577999889886--5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHHH
Q ss_conf 1140677520021212233220597178606403101000001011
Q gi|254780971|r 56 YLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPGI 101 (219)
Q Consensus 56 ~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg~ 101 (219)
.. ....+.+.+++..++|..+.+||.|--+|.+.|||.|.
T Consensus 84 ~~------~~~~l~~~Lr~~~~~g~~v~~ic~G~~~LA~aGlL~g~ 123 (202)
T 3gra_A 84 PL------KYPELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDY 123 (202)
T ss_dssp CS------CCTTHHHHHHHHHHHTCEEEEETTHHHHHHHHTCCTTE
T ss_pred CC------CCHHHHHHHHHHHHHCCEEEEECHHHHHHHHCCCCCCC
T ss_conf 44------69899999999887298785105788999976899998
No 50
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isoprenoid biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=97.78 E-value=9.8e-05 Score=49.76 Aligned_cols=99 Identities=12% Similarity=0.220 Sum_probs=63.3
Q ss_pred CEEEEEEC-----CCCCCHHHH---HHHHHHHCCCCEEEEE-------------------------------------CC
Q ss_conf 96899844-----970647999---9999985499639982-------------------------------------15
Q gi|254780971|r 1 MKTAIVQI-----PGLNRDNDM---IKAITKIIGQSPILVW-------------------------------------QS 35 (219)
Q Consensus 1 mkvaVl~~-----pGsNcd~e~---~~A~~~~~~~~~~~v~-------------------------------------~~ 35 (219)
|++|||-- -|| -..|+ ..++.+ +|.++...- .+
T Consensus 24 m~~aviLsGcG~~DGs-Ei~Eav~~l~~L~r-aG~~v~~~aPd~~q~~vv~H~~g~~~~~~Rnvl~esariarg~i~~l~ 101 (242)
T 3l3b_A 24 LNSAVILAGCGHMDGS-EIREAVLVMLELDR-HNVNFKCFAPNKNQKQVVDHKKKESVGEVRNILVESARIARGSVYDIE 101 (242)
T ss_dssp CEEEEECCCSSTTTSC-CHHHHHHHHHHHHH-TTCEEEEEECSSBCSCEEETTTTEEESCCCBHHHHHHHHTTTCEEEGG
T ss_pred CCEEEEEECCCCCCCH-HHHHHHHHHHHHHH-CCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 4469998089786742-29799999999998-899799994698755125615887132455421145532467878577
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCH-----HH-HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEEC-CCHHHH
Q ss_conf 464456478997287345431140-----67-7520021212233220597178606403101000-001011
Q gi|254780971|r 36 DTDIPDVDLIVIPGGFSYGDYLRC-----GA-IAARTPVMQAIKKKAQQGIKVMGICNGFQILVEL-NLLPGI 101 (219)
Q Consensus 36 ~~~l~~~d~lvipGGFSygD~l~a-----G~-i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~el-GLlPg~ 101 (219)
+.+..+||+|+|||||--...|.. +. +..+..+.+.+++|.++++|+-.||-|-.+|.+. |++.|.
T Consensus 102 ev~~~dyDaliiPGG~g~a~nL~~~~~~~~~~~~~~~~v~~li~~f~~~~KpiaaIC~aP~lla~~~g~l~g~ 174 (242)
T 3l3b_A 102 QIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALLKDIAKV 174 (242)
T ss_dssp GCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHHTTTCCC
T ss_pred HCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCC
T ss_conf 8894128989988976788777776651831410238999999999987997999877699999983754686
No 51
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor}
Probab=97.69 E-value=0.00022 Score=47.53 Aligned_cols=93 Identities=19% Similarity=0.312 Sum_probs=63.6
Q ss_pred EEEEEECCCCCCHHHHHHH---HHHHCCCCEEEEECCC--------------------CCCCCCCEEEECCCCCCCCCCC
Q ss_conf 6899844970647999999---9985499639982154--------------------6445647899728734543114
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKA---ITKIIGQSPILVWQSD--------------------TDIPDVDLIVIPGGFSYGDYLR 58 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A---~~~~~~~~~~~v~~~~--------------------~~l~~~d~lvipGGFSygD~l~ 58 (219)
||+|+.++|.. |.|+... |.+ +++++.++-..+ ....|||+|++|||....+
T Consensus 11 kv~i~v~~Gf~-~~E~~~p~~vLrr-ag~~v~~~s~~~~~~V~~~~G~~i~~d~~l~d~~~~d~d~liipGg~~~~~--- 85 (208)
T 3ot1_A 11 RILVPVAHGSE-EMETVIIVDTLVR-AGFQVTMAAVGDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQ--- 85 (208)
T ss_dssp EEEEEECTTCC-HHHHHHHHHHHHH-TTCEEEEEESSSCSEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHH---
T ss_pred EEEEEECCCCC-HHHHHHHHHHHHH-CCCEEEEEECCCCCCEEECCCCEEECCCCHHHCCCCCCEEEEECCCCCHHH---
T ss_conf 69999579972-9999999999998-899899998799961770899889657775775702427998167775576---
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHEECCCHHHH
Q ss_conf 06775200212122332205971786064031-01000001011
Q gi|254780971|r 59 CGAIAARTPVMQAIKKKAQQGIKVMGICNGFQ-ILVELNLLPGI 101 (219)
Q Consensus 59 aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQ-iL~elGLlPg~ 101 (219)
.......+.+.++++.+.++++.++|.|-. +|.+.||+.|.
T Consensus 86 --~l~~~~~l~~~lr~~~~~~~~i~a~~~~~~~lla~agll~g~ 127 (208)
T 3ot1_A 86 --AFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGA 127 (208)
T ss_dssp --HHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTC
T ss_pred --HHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf --650599999999987542762000346888999865984687
No 52
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, parkinson'S disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=97.63 E-value=4.8e-05 Score=51.73 Aligned_cols=58 Identities=22% Similarity=0.349 Sum_probs=43.6
Q ss_pred CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHHH
Q ss_conf 445647899728734543114067752002121223322059717860640310100000101
Q gi|254780971|r 38 DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLPG 100 (219)
Q Consensus 38 ~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg 100 (219)
+.++||+|+||||..--+. +.....+.+.+++|.++++++-.||.|-++|...++-.|
T Consensus 86 ~~~dydav~ipGG~g~~~~-----l~~~~~l~~li~~~~~~~k~iaaIChgp~~L~~a~~~~g 143 (224)
T 1u9c_A 86 DAHGFDAIFLPGGHGTMFD-----FPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNATYKDG 143 (224)
T ss_dssp GGSSCSEEEECCCTTHHHH-----STTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTS
T ss_pred CHHHCCEEEECCCCCHHHH-----CCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHCEECCCC
T ss_conf 9756898995898307775-----211589999999999759979996123000111125899
No 53
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00028 Score=46.88 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=41.4
Q ss_pred CCCCCCCEEEECCCCCCCCCCCHHH-HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCH
Q ss_conf 6445647899728734543114067-7520021212233220597178606403101000001
Q gi|254780971|r 37 TDIPDVDLIVIPGGFSYGDYLRCGA-IAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLL 98 (219)
Q Consensus 37 ~~l~~~d~lvipGGFSygD~l~aG~-i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLl 98 (219)
.+.++||+|++|||+. +-. ......+.+.++.|.++++++-.||.|-++|..+.-+
T Consensus 94 v~~~~ydav~~pGG~g------~~~dl~~~~~l~~l~~~~~~~~k~vaaiChgp~~L~~~~~~ 150 (244)
T 3kkl_A 94 VNASDYKVFFASAGHG------ALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDI 150 (244)
T ss_dssp CCGGGCSEEEECCSTT------HHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCT
T ss_pred CCHHHCEEEEECCCCC------CCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCC
T ss_conf 8985751899759863------31222122568999999984798399965068998753014
No 54
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=97.23 E-value=0.00032 Score=46.51 Aligned_cols=56 Identities=14% Similarity=0.141 Sum_probs=41.6
Q ss_pred CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCH
Q ss_conf 4456478997287345431140677520021212233220597178606403101000001
Q gi|254780971|r 38 DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLL 98 (219)
Q Consensus 38 ~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLl 98 (219)
+.++||+|++|||+.--+ .+.....+.+.++++.++++++..||.|-++|..+.-+
T Consensus 95 ~~~~ydav~ipGG~g~~~-----dl~~~~~l~~~~~~~~~~~k~v~aiChgp~~L~~~~~~ 150 (243)
T 1rw7_A 95 NADDYQIFFASAGHGTLF-----DYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDK 150 (243)
T ss_dssp CGGGEEEEEECCSTTHHH-----HGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCT
T ss_pred CHHHCCEEEECCCCHHHH-----HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCC
T ss_conf 986786899569960376-----62430245599999997699368861216888753205
No 55
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis}
Probab=96.99 E-value=0.0011 Score=43.10 Aligned_cols=56 Identities=14% Similarity=0.186 Sum_probs=41.3
Q ss_pred CCCCCCEEEECCCCCCCCCCCHHH-HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHH
Q ss_conf 445647899728734543114067-75200212122332205971786064031010000010
Q gi|254780971|r 38 DIPDVDLIVIPGGFSYGDYLRCGA-IAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLP 99 (219)
Q Consensus 38 ~l~~~d~lvipGGFSygD~l~aG~-i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlP 99 (219)
+..+||+|++|||. ++-. +.....+.+-+++|.+++++|-.||.|-.+|....+-.
T Consensus 102 ~~~~ydav~~pGG~------g~~~dl~~~~~l~~li~~~~~~~k~vaaICHGpa~L~~~~~~~ 158 (247)
T 3n7t_A 102 APHDYGLMFVCGGH------GALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGIHDEN 158 (247)
T ss_dssp CGGGCSEEEECCST------THHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGCBCTT
T ss_pred CHHHCCEEEECCCC------CHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCC
T ss_conf 98677889947987------5676024407899999999964990999741679987401468
No 56
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=96.51 E-value=0.0029 Score=40.39 Aligned_cols=52 Identities=19% Similarity=0.316 Sum_probs=38.1
Q ss_pred CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEEC
Q ss_conf 456478997287345431140677520021212233220597178606403101000
Q gi|254780971|r 39 IPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVEL 95 (219)
Q Consensus 39 l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~el 95 (219)
..+||+|+||||..-- --+.....+.+.++.|.++|++|..||-|-.+|..+
T Consensus 143 ~~dYdaVfiPGGhG~m-----~dL~~~~~l~~ll~~f~~~gk~VaAICHGPaaLl~a 194 (291)
T 1n57_A 143 DSEYAAIFVPGGHGAL-----IGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLAL 194 (291)
T ss_dssp TCSEEEEEECCSGGGG-----SSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGG
T ss_pred CCCCCEEEECCCCCHH-----HHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
T ss_conf 4345389989986347-----662108899999999997599289846026765221
No 57
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=94.84 E-value=0.062 Score=31.83 Aligned_cols=98 Identities=13% Similarity=0.188 Sum_probs=61.2
Q ss_pred CEEEEEECCCCCCHH-H---HHHHHHHHCCCCEEEEECC----------CCCCCCCCEEEECCCCC-------CCCCCCH
Q ss_conf 968998449706479-9---9999998549963998215----------46445647899728734-------5431140
Q gi|254780971|r 1 MKTAIVQIPGLNRDN-D---MIKAITKIIGQSPILVWQS----------DTDIPDVDLIVIPGGFS-------YGDYLRC 59 (219)
Q Consensus 1 mkvaVl~~pGsNcd~-e---~~~A~~~~~~~~~~~v~~~----------~~~l~~~d~lvipGGFS-------ygD~l~a 59 (219)
-|||||...|...+. + +..|+.. .|..+.++--. ...--.||.+++|||-+ +.-.-.+
T Consensus 530 RkVaIL~~dG~d~~~~~~~~l~~aL~~-~Ga~~~iIAp~~g~~vd~T~~~~~Sv~fDAVvV~gG~~~~~~~~~~~~~~~~ 608 (688)
T 2iuf_A 530 LKVGLLASVNKPASIAQGAKLQVALSS-VGVDVVVVAERXANNVDETYSASDAVQFDAVVVADGAEGLFGADSFTVEPSA 608 (688)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHGG-GTCEEEEEESSCCTTCCEESTTCCGGGCSEEEECTTCGGGCCTTTTTCCCCT
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 267665237864128889999999985-8983899678987653606627984265259978985001233211135444
Q ss_pred H----HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHH
Q ss_conf 6----775200212122332205971786064031010000010
Q gi|254780971|r 60 G----AIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLP 99 (219)
Q Consensus 60 G----~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlP 99 (219)
+ ........+.-|.+..+-.|+|-.+|.|-++|..+|+..
T Consensus 609 ~~~~~~L~~~g~a~~fV~EAy~H~KpIga~g~g~~lL~~a~i~~ 652 (688)
T 2iuf_A 609 GSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALESGQISS 652 (688)
T ss_dssp TSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHHHTTCCT
T ss_pred CCHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCC
T ss_conf 31056644676099999999844786997465799998769988
No 58
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=94.68 E-value=0.1 Score=30.50 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=62.3
Q ss_pred EEEEEECCCC-C--CH--HHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 6899844970-6--47--99999999854996399821546-------44564789972873454311406775200212
Q gi|254780971|r 2 KTAIVQIPGL-N--RD--NDMIKAITKIIGQSPILVWQSDT-------DIPDVDLIVIPGGFSYGDYLRCGAIAARTPVM 69 (219)
Q Consensus 2 kvaVl~~pGs-N--cd--~e~~~A~~~~~~~~~~~v~~~~~-------~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~ 69 (219)
||++|-.-.. + -+ .....+|.+ .|+++..+...+. .+.++|+|.+.|| |..+-=..+..+.+.
T Consensus 29 ki~~IPTAs~~~~~~~~~~~~~~~f~~-lG~~v~~ldl~~~~~~~~~~~l~~ad~I~~~GG----nt~~l~~~l~~t~~~ 103 (206)
T 3l4e_A 29 TVTFIPTASTVEEVTFYVEAGKKALES-LGLLVEELDIATESLGEITTKLRKNDFIYVTGG----NTFFLLQELKRTGAD 103 (206)
T ss_dssp EEEEECGGGGGCSCCHHHHHHHHHHHH-TTCEEEECCTTTSCHHHHHHHHHHSSEEEECCS----CHHHHHHHHHHHTHH
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHH-CCCEEEEEECCCCCHHHHHHHHHCCCEEEECCC----CHHHHHHHHHHCCHH
T ss_conf 799992898887644899999999998-799789985547997999999976999998898----799999999868859
Q ss_pred HHHHHHHHCCCEEEEECCCHHHHEEC
Q ss_conf 12233220597178606403101000
Q gi|254780971|r 70 QAIKKKAQQGIKVMGICNGFQILVEL 95 (219)
Q Consensus 70 ~~i~~~~~~g~~vLGICNGfQiL~el 95 (219)
+.+++..++|+++.|..-|..++.+.
T Consensus 104 ~~l~~~~~~G~v~~G~SAGA~i~~~~ 129 (206)
T 3l4e_A 104 KLILEEIAAGKLYIGESAGAVITSPN 129 (206)
T ss_dssp HHHHHHHHTTCEEEEETHHHHTTSSB
T ss_pred HHHHHHHHCCCEEEEECHHHHHCCCC
T ss_conf 99999987797899987588733873
No 59
>1p80_A Catalase HPII; beta barrel, channel, variant, oxidoreductase; HET: HEM; 1.65A {Escherichia coli} SCOP: c.23.16.3 e.5.1.1 PDB: 1p81_A* 1p7z_A* 1p7y_A* 1qws_A* 1gge_A* 1iph_A* 1cf9_A* 1ggk_A* 1qf7_A* 1gg9_A* 1ggf_A* 1ggh_A* 1ggj_A* 1ye9_E* 1ye9_A*
Probab=94.39 E-value=0.3 Score=27.50 Aligned_cols=89 Identities=15% Similarity=0.201 Sum_probs=59.1
Q ss_pred EEEEEECCCCCCHH--HHHHHHHHHCCCCEEEEEC-------CC-------CC-----CCCCCEEEECCCCCCCCCCCHH
Q ss_conf 68998449706479--9999999854996399821-------54-------64-----4564789972873454311406
Q gi|254780971|r 2 KTAIVQIPGLNRDN--DMIKAITKIIGQSPILVWQ-------SD-------TD-----IPDVDLIVIPGGFSYGDYLRCG 60 (219)
Q Consensus 2 kvaVl~~pGsNcd~--e~~~A~~~~~~~~~~~v~~-------~~-------~~-----l~~~d~lvipGGFSygD~l~aG 60 (219)
|||||.-.|++.+. .+..|++. .|..+.+|-- ++ .. ---||.+++||| + ..
T Consensus 602 kvail~~dg~~~~~~~~~~~al~~-~g~~~~iva~~~g~v~~~~g~~~~v~~~~~~~~s~~fDav~v~~g-~------~~ 673 (753)
T 1p80_A 602 VVAILLNDEVRSADLLAILKALKA-KGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCG-N------IA 673 (753)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHH-HTCEEEEEESSSSEEECTTSCEEECCEETTTSCGGGCSEEEECCS-C------TH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHH-CCCEEEEEECCCCCEECCCCCEECCCEEECCCCCCCCCEEEECCC-C------HH
T ss_conf 699996788778999999999997-799379981465745658896734642575798100387997799-8------67
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCH
Q ss_conf 77520021212233220597178606403101000001
Q gi|254780971|r 61 AIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLL 98 (219)
Q Consensus 61 ~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLl 98 (219)
..+.......-+.+..+-+|+|-.++.|-++|..+|+.
T Consensus 674 ~l~~~~~~~~~~~ea~~h~K~i~~~~~~~~~~~~~~~~ 711 (753)
T 1p80_A 674 DIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIA 711 (753)
T ss_dssp HHHTCHHHHHHHHHHHHTTCCEEEEGGGGGGGGTTTCC
T ss_pred HHCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCC
T ss_conf 73456509999999985279799846679999865997
No 60
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=92.26 E-value=0.46 Score=26.29 Aligned_cols=89 Identities=18% Similarity=0.234 Sum_probs=58.7
Q ss_pred EEEEEECCCCCCH---HHHHHHHHHHCCCCEEEEECCC----------CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
Q ss_conf 6899844970647---9999999985499639982154----------64456478997287345431140677520021
Q gi|254780971|r 2 KTAIVQIPGLNRD---NDMIKAITKIIGQSPILVWQSD----------TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPV 68 (219)
Q Consensus 2 kvaVl~~pGsNcd---~e~~~A~~~~~~~~~~~v~~~~----------~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~ 68 (219)
|+.||..-+..-+ .+-..+|++++...+..+...+ ..|.+.|+|.+.|| |-.+.-..|..+++
T Consensus 58 ~I~viptAS~~~~~~~~~y~~~f~~lG~~~v~~l~i~~r~~A~~~~~~~~l~~Ad~I~~~GG----dq~~l~~~l~~t~l 133 (291)
T 3en0_A 58 IIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGG----DQLRLCGLLADTPL 133 (291)
T ss_dssp EEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCS----CHHHHHHHHTTCHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCHHHHHHHHCCCEEEECCC----CHHHHHHHHHHCCH
T ss_conf 69999698788389999999999985996589994468366488899999851999999489----99999999873677
Q ss_pred HHHHHHHHHCCCE-EEEECCCHHHHEE
Q ss_conf 2122332205971-7860640310100
Q gi|254780971|r 69 MQAIKKKAQQGIK-VMGICNGFQILVE 94 (219)
Q Consensus 69 ~~~i~~~~~~g~~-vLGICNGfQiL~e 94 (219)
.+.+++..++|+. +.|.=-|.-+|.+
T Consensus 134 ~~~L~~~~~~G~vviaGtSAGA~i~~~ 160 (291)
T 3en0_A 134 MDRIRQRVHNGEISLAGTSAGAAVMGH 160 (291)
T ss_dssp HHHHHHHHHTTSSEEEEETHHHHTTSS
T ss_pred HHHHHHHHHCCCEEEEECCHHHHHCCC
T ss_conf 999999998299079963735542642
No 61
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix motif, hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=91.48 E-value=0.27 Score=27.79 Aligned_cols=89 Identities=11% Similarity=0.293 Sum_probs=62.0
Q ss_pred EEEEEECCCCCCHHH-----HHHHHHHHCCCCEEEEECCC---CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 689984497064799-----99999985499639982154---6445647899728734543114067752002121223
Q gi|254780971|r 2 KTAIVQIPGLNRDND-----MIKAITKIIGQSPILVWQSD---TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIK 73 (219)
Q Consensus 2 kvaVl~~pGsNcd~e-----~~~A~~~~~~~~~~~v~~~~---~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~ 73 (219)
||++|-+-+..-+++ +..+|.+ .+.....+...+ ..+.++|+|.+.|| |..+.-..+..+++.+.++
T Consensus 33 ~vl~IPtAs~~~~~~~y~~~~~~~~~~-lg~~v~~l~~~~~~~~~i~~ad~I~~~GG----n~~~l~~~l~~t~l~~~i~ 107 (229)
T 1fy2_A 33 SAVFIPFAGVTQTWDEYTDKTAEVLAP-LGVNVTGIHRVADPLAAIEKAEIIIVGGG----NTFQLLKESRERGLLAPMA 107 (229)
T ss_dssp EEEEECTTCCSSCHHHHHHHHHHHHGG-GTCEEEETTSSSCHHHHHHHCSEEEECCS----CHHHHHHHHHHTTCHHHHH
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHH-CCCCCEEECCCCCHHHHHHHCCEEEECCC----CHHHHHHHHHHCCHHHHHH
T ss_conf 399980899987778999999998754-18861354255688999974999998898----9999999987388699999
Q ss_pred HHHHCCCEEEEECCCHHHHEEC
Q ss_conf 3220597178606403101000
Q gi|254780971|r 74 KKAQQGIKVMGICNGFQILVEL 95 (219)
Q Consensus 74 ~~~~~g~~vLGICNGfQiL~el 95 (219)
+..++|+++.|.=-|.-++.+.
T Consensus 108 ~~~~~G~vi~G~SAGA~v~~~~ 129 (229)
T 1fy2_A 108 DRVKRGALYIGWSAGANLACPT 129 (229)
T ss_dssp HHHHTTCEEEEETHHHHHTSSB
T ss_pred HHHHCCCEEEEECHHHHHCCCC
T ss_conf 9987598799966677652786
No 62
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=88.16 E-value=1.3 Score=23.41 Aligned_cols=71 Identities=30% Similarity=0.372 Sum_probs=36.4
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEE--EEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 968998449706479999999985499639--982154644564789972873454311406775200212122332205
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPI--LVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQ 78 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~--~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~ 78 (219)
||++|+--+. ++.+....-+++...... ....++....++|+++.-|| | |.+.. +.+.+ ..
T Consensus 1 Mki~iv~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~Dlvi~iGG----D----GT~L~------a~~~~-~~ 63 (258)
T 1yt5_A 1 MKIAILYREE--REKEGEFLKEKISKEHEVIEFGEANAPGRVTADLIVVVGG----D----GTVLK------AAKKA-AD 63 (258)
T ss_dssp CEEEEEECGG--GHHHHHHHHHHHTTTSEEEEEEESSSCSCBCCSEEEEEEC----H----HHHHH------HHTTB-CT
T ss_pred CEEEEEECCC--CHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECC----C----HHHHH------HHHHH-CC
T ss_conf 9899997797--2788999999987650431231356566788789999888----2----99999------99982-78
Q ss_pred CCEEEEECCC
Q ss_conf 9717860640
Q gi|254780971|r 79 GIKVMGICNG 88 (219)
Q Consensus 79 g~~vLGICNG 88 (219)
+.|+|||--|
T Consensus 64 ~~PilgIn~G 73 (258)
T 1yt5_A 64 GTPMVGFKAG 73 (258)
T ss_dssp TCEEEEEESS
T ss_pred CCCEEEECCC
T ss_conf 9978987169
No 63
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=87.71 E-value=1.5 Score=22.93 Aligned_cols=71 Identities=25% Similarity=0.403 Sum_probs=43.4
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 96899844970647999999998549963998215464456478997287345431140677520021212233220597
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGI 80 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~ 80 (219)
||++|+----.+- .+.+.|+.+ ..++.........+++++|+++.-|| | |.+.. +++.+ ....
T Consensus 30 ~r~~~v~~~~~~~-kri~~~lk~-~~~~~~~~~~~~~~~e~~DlVI~iGG----D----GTlL~------a~~~~-~~~~ 92 (278)
T 1z0s_A 30 MRAAVVYKTDGHV-KRIEEALKR-LEVEVELFNQPSEELENFDFIVSVGG----D----GTILR------ILQKL-KRCP 92 (278)
T ss_dssp CEEEEEESSSTTH-HHHHHHHHH-TTCEEEEESSCCGGGGGSSEEEEEEC----H----HHHHH------HHTTC-SSCC
T ss_pred EEEEEEECCCHHH-HHHHHHHHH-CCCEEEECCCCHHHCCCCCEEEEECC----C----HHHHH------HHHHH-CCCC
T ss_conf 5899998476489-999999874-27558984798112127999999878----6----99999------99982-7998
Q ss_pred EEEEECCC
Q ss_conf 17860640
Q gi|254780971|r 81 KVMGICNG 88 (219)
Q Consensus 81 ~vLGICNG 88 (219)
|+|||--|
T Consensus 93 PilGIN~G 100 (278)
T 1z0s_A 93 PIFGINTG 100 (278)
T ss_dssp CEEEEECS
T ss_pred CEEEECCC
T ss_conf 69998489
No 64
>2ov6_A V-type ATP synthase subunit F; F subunit, A1AO ATP synthase, structure, hydrolase; NMR {Methanosarcina mazei GO1}
Probab=71.38 E-value=3.1 Score=21.00 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=27.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCC----------CCCCCEEEE
Q ss_conf 96899844970647999999998549963998215464----------456478997
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTD----------IPDVDLIVI 47 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~----------l~~~d~lvi 47 (219)
||+||+ +|+|+.-.|. ++|...++.-.++.+ -++|-.+++
T Consensus 1 MKIaVI------Gd~dtv~GFr-LaGi~~v~~~~~~ee~~~~~~~~~~~~~~gII~i 50 (101)
T 2ov6_A 1 MELAVI------GKSEFVTGFR-LAGISKVYETPDIPATESAVRSVLEDKSVGILVM 50 (101)
T ss_dssp CCEEEE------ECHHHHHHHH-HHTCCEEEECCSTTTHHHHHHHHHHHTSSSEEEE
T ss_pred CEEEEE------CCHHHHHHHH-HCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 989999------4889889999-7188711679998999999999970798699997
No 65
>1vjt_A Alpha-glucosidase; TM0752, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics, hydrolase; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=69.50 E-value=3 Score=21.11 Aligned_cols=25 Identities=28% Similarity=0.674 Sum_probs=16.9
Q ss_pred HHHHHHHHHHCCCEEEEECCCHHHHEE
Q ss_conf 121223322059717860640310100
Q gi|254780971|r 68 VMQAIKKKAQQGIKVMGICNGFQILVE 94 (219)
Q Consensus 68 ~~~~i~~~~~~g~~vLGICNGfQiL~e 94 (219)
+.+++.++ .+..++|+|++-|.+.+
T Consensus 177 vt~Av~~~--~~~k~vGLC~~~~~~~~ 201 (483)
T 1vjt_A 177 ITQAVRRW--TGANIVGFCHGVAGVYE 201 (483)
T ss_dssp HHHHHHHH--SCCCEEECCCGGGGHHH
T ss_pred HHHHHHHC--CCCCEEEECCCHHHHHH
T ss_conf 99999852--69988996897277999
No 66
>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, acetylation, ATP-binding, cytoplasm, folate-binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A
Probab=66.25 E-value=5.4 Score=19.45 Aligned_cols=53 Identities=23% Similarity=0.324 Sum_probs=22.0
Q ss_pred CCCEEEECC-CCC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEE
Q ss_conf 647899728-734-543114067752002121223322059717860640310100
Q gi|254780971|r 41 DVDLIVIPG-GFS-YGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVE 94 (219)
Q Consensus 41 ~~d~lvipG-GFS-ygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~e 94 (219)
+.|++++|| +|. .|-+||=|..... ..+..+.+......+.+|+|-=||+.-+
T Consensus 128 ~iDlilVP~lafD~~G~RLG~GgGyYD-R~L~~~~~~~~~~~~~igl~~~~Q~~~~ 182 (203)
T 3hy3_A 128 GLDLIFMPGLGFDKHGNRLGRGKGYYD-AYLKRCLQHQEVKPYTLALAFKEQICLQ 182 (203)
T ss_dssp CCSEEEECCSEECTTCCEECSSSCHHH-HHHHHHTTTCSSCCEEEEECCGGGBCSC
T ss_pred CCCEEEEEEEEECCCCCEEECCCCCCC-HHHHHHHHCCCCCCCEEEEEEHHEEECC
T ss_conf 578898333888068842307885433-6999855405778878999830104077
No 67
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=63.34 E-value=6.8 Score=18.82 Aligned_cols=73 Identities=18% Similarity=0.312 Sum_probs=39.7
Q ss_pred EEEEEECCCCCCHHHHHHHHHH---HCCCCEEEEECC---------------------------CCCCCCCCEEEECCCC
Q ss_conf 6899844970647999999998---549963998215---------------------------4644564789972873
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITK---IIGQSPILVWQS---------------------------DTDIPDVDLIVIPGGF 51 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~---~~~~~~~~v~~~---------------------------~~~l~~~d~lvipGGF 51 (219)
||+|+.-|+.---.+++..+.+ ..+.++.+.-.. +...+++|++|.-||
T Consensus 6 ~v~lv~~~~k~~a~~~a~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvivlGG- 84 (307)
T 1u0t_A 6 SVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGG- 84 (307)
T ss_dssp EEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEEEC-
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECC-
T ss_conf 9999980999899999999999999789989998431331465446741122037532102465344456458999768-
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 4543114067752002121223322059717860640
Q gi|254780971|r 52 SYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNG 88 (219)
Q Consensus 52 SygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNG 88 (219)
| |. +..+.+.+...+.|+|||--|
T Consensus 85 ---D----GT------~L~aa~~~~~~~~PilGIN~G 108 (307)
T 1u0t_A 85 ---D----GT------FLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp ---H----HH------HHHHHHHHHHHTCCEEEEECS
T ss_pred ---C----HH------HHHHHHHHCCCCCEEEEECCC
T ss_conf ---7----78------999999746469839997589
No 68
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=62.83 E-value=6.8 Score=18.83 Aligned_cols=68 Identities=13% Similarity=0.340 Sum_probs=42.1
Q ss_pred EEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHH-HHHHHHHHHHCCCEEE
Q ss_conf 984497064799999999854996399821546445647899728734543114067752002-1212233220597178
Q gi|254780971|r 5 IVQIPGLNRDNDMIKAITKIIGQSPILVWQSDTDIPDVDLIVIPGGFSYGDYLRCGAIAARTP-VMQAIKKKAQQGIKVM 83 (219)
Q Consensus 5 Vl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~~l~~~d~lvipGGFSygD~l~aG~i~~~~~-~~~~i~~~~~~g~~vL 83 (219)
.+-.+|.+-|++-+ .+|+ .....-|.. .++.+.+.+|+..| .| .+.+. +...++...+.++|++
T Consensus 7 ~~~~~g~~~dy~~f--~erl--~~~~~~W~d-~~~~~a~vVIVL~G-~y---------t~~s~WI~~EI~~A~~~~KPII 71 (111)
T 1eiw_A 7 LYITEGEVEDYRVF--LERL--EQSGLEWRP-ATPEDADAVIVLAG-LW---------GTRRDEILGAVDLARKSSKPII 71 (111)
T ss_dssp EEECCCCSHHHHHH--HHHH--HHHCSCEEE-CCSSSCSEEEEEGG-GT---------TTSHHHHHHHHHHHTTTTCCEE
T ss_pred EEEECCCCHHHHHH--HHHH--HHCCCCCCC-CCCCCCCEEEEEEE-CC---------CCCCHHHHHHHHHHHHCCCCEE
T ss_conf 98833750259999--9998--751434120-33255989999940-44---------4676899999999998699889
Q ss_pred EECC
Q ss_conf 6064
Q gi|254780971|r 84 GICN 87 (219)
Q Consensus 84 GICN 87 (219)
||=-
T Consensus 72 gV~p 75 (111)
T 1eiw_A 72 TVRP 75 (111)
T ss_dssp EECC
T ss_pred EEEE
T ss_conf 9981
No 69
>2qai_A V-type ATP synthase subunit F; VATF_pyrfu, ATPF, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Pyrococcus furiosus}
Probab=60.97 E-value=7 Score=18.75 Aligned_cols=24 Identities=21% Similarity=0.400 Sum_probs=20.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEE
Q ss_conf 9689984497064799999999854996399
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPIL 31 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~ 31 (219)
||+||+ +|+|+.--|. ++|....+
T Consensus 1 MkIaVI------GD~dtv~GFr-LaGI~~~~ 24 (111)
T 2qai_A 1 MKIVVM------GDSDTVVGFR-LAGVHEAY 24 (111)
T ss_dssp CEEEEE------ECHHHHHHHH-HHTCSEEE
T ss_pred CEEEEE------CCHHHHHHHH-HHCCCCCC
T ss_conf 989998------6689899999-81888420
No 70
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=60.80 E-value=8.9 Score=18.08 Aligned_cols=54 Identities=11% Similarity=0.198 Sum_probs=36.4
Q ss_pred CCEEEEEEEC-CCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC------EEEEECC
Q ss_conf 9689986201-3302330867741154225036531688888988112------6688869
Q gi|254780971|r 133 NQIIKCPVAH-HDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD------IAGVINR 186 (219)
Q Consensus 133 ~~~l~~piaH-gEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~------IAgi~s~ 186 (219)
..+..+|+.- .+..|..+.+.++++.+..--++-++.|+||.|.... |+-+|.+
T Consensus 216 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~l~~~~~~ 276 (546)
T 2zy4_A 216 YALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAE 276 (546)
T ss_dssp SCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHH
T ss_pred CEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 8479998405855588999999997289999789983998960423799999999976302
No 71
>3f6t_A Aspartate aminotransferase; YP_194538.1, structural genomics, joint center for structural genomics, JCSG; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=57.31 E-value=8.7 Score=18.14 Aligned_cols=58 Identities=10% Similarity=0.302 Sum_probs=33.1
Q ss_pred CEEEEEE-ECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC------EEEEECCCCCEE
Q ss_conf 6899862-013302330867741154225036531688888988112------668886999899
Q gi|254780971|r 134 QIIKCPV-AHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD------IAGVINRRGNVL 191 (219)
Q Consensus 134 ~~l~~pi-aHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~------IAgi~s~~G~vl 191 (219)
+++.+++ +..|+.|..+.+.++++.+..--++-.+.|+||.|.... |+-+|.+..+++
T Consensus 216 ~~v~v~~~~~~~~~~~~d~~~L~~~~~~~~k~i~i~nP~NPTG~~~s~e~l~~i~~~~~~~~~l~ 280 (533)
T 3f6t_A 216 ELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLM 280 (533)
T ss_dssp EEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCE
T ss_pred EEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 89998377774569878999999728999858998089797154379999999999998659979
No 72
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransferase); PLP-binding enzyme, lysine biosynthesis, structural genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis H37RV}
Probab=53.37 E-value=12 Score=17.30 Aligned_cols=59 Identities=19% Similarity=0.273 Sum_probs=37.1
Q ss_pred CCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC------EEEEECCCCCEE
Q ss_conf 96899862013302330867741154225036531688888988112------668886999899
Q gi|254780971|r 133 NQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD------IAGVINRRGNVL 191 (219)
Q Consensus 133 ~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~------IAgi~s~~G~vl 191 (219)
.++..+|+---.+.+..+.+.+++..+....++-++.|+||.|+... |+-+|.+.+-++
T Consensus 132 ~~~~~v~~~~e~~~~~~d~~~l~~~~~~~~~~i~i~nP~NPTG~~~s~~~~~~l~~~~~~~~~~i 196 (411)
T 2o0r_A 132 AHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVV 196 (411)
T ss_dssp CEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCEEEE
T ss_conf 96545655621146678899999728889849997999798761252676402111244532589
No 73
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H
Probab=52.90 E-value=6.7 Score=18.84 Aligned_cols=28 Identities=11% Similarity=0.218 Sum_probs=22.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 96899844970647999999998549963998215
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQS 35 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~ 35 (219)
||++|+ +|+|+.-.|. ++|.+++.+...
T Consensus 4 mki~VI------Gd~d~v~GF~-L~Gi~~~~~~~~ 31 (109)
T 2d00_A 4 VRMAVI------ADPETAQGFR-LAGLEGYGASSA 31 (109)
T ss_dssp CCEEEE------ECHHHHHHHH-HTTSEEEECSSH
T ss_pred EEEEEE------CCHHHHHHHH-HHCEEEEECCCH
T ss_conf 599998------3789877877-405055866998
No 74
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2, protein structure initiative; 1.88A {Methanothermobacterthermautotrophicus str}
Probab=51.50 E-value=3.8 Score=20.45 Aligned_cols=55 Identities=22% Similarity=0.466 Sum_probs=27.5
Q ss_pred CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEECCCHH
Q ss_conf 4564789972873454311406775200212122332205971786064031010000010
Q gi|254780971|r 39 IPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVELNLLP 99 (219)
Q Consensus 39 l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~elGLlP 99 (219)
..+.|.+|+=||-|--. ++. .-+.+.+-+.+....++.++|||= +.++-+.||..
T Consensus 82 ~~~~D~vVllGGLAMP~---~~v--t~e~v~~li~k~~~~~~kiiGICF-msmF~kagW~~ 136 (157)
T 2r47_A 82 PGNVDVLVLLGGLSMPG---IGS--DIEDVKKLVEDALEEGGELMGLCY-MDMFARAGWYE 136 (157)
T ss_dssp CCCEEEEEEEGGGGSTT---TSC--CHHHHHHHHHHHEEEEEEEEEEEE-TTHHHHTTHHH
T ss_pred CCCCCEEEEECCCCCCC---CCC--CHHHHHHHHHHHCCCCCCEEEEEH-HHHHHHCCCCC
T ss_conf 89999999967655799---998--999999999984138997999973-99898769987
No 75
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=50.10 E-value=13 Score=16.99 Aligned_cols=46 Identities=9% Similarity=0.253 Sum_probs=30.6
Q ss_pred CCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 96899862013302330867741154225036531688888988112
Q gi|254780971|r 133 NQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD 179 (219)
Q Consensus 133 ~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~ 179 (219)
..++.+|... |+.|..+.+.+++....+-.++=|+.|+||.|....
T Consensus 136 ~~~v~v~~~~-~~~~~~d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s 181 (388)
T 1j32_A 136 GTPVILPTTV-ETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYT 181 (388)
T ss_dssp CEEEEECCCG-GGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred CEEEEEECCC-CCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCC
T ss_conf 9899972564-446688999999737889829998899899873488
No 76
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=49.58 E-value=13 Score=16.92 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=59.5
Q ss_pred HHHHHHHCCCCEEEEECCC-------CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHH
Q ss_conf 9999985499639982154-------644564789972873454311406775200212122332205971786064031
Q gi|254780971|r 18 IKAITKIIGQSPILVWQSD-------TDIPDVDLIVIPGGFSYGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQ 90 (219)
Q Consensus 18 ~~A~~~~~~~~~~~v~~~~-------~~l~~~d~lvipGGFSygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQ 90 (219)
+.++.+ .++++...+..+ ..|.++|.||+=+-++ +|.+. ....+++.+++++|+.++|+=.+.-
T Consensus 38 a~~L~~-~g~~v~tat~~e~~~~l~~e~L~~~Dvlv~~~~~~-~~~l~-------~~~~~~l~~~V~~G~Glv~lHsa~~ 108 (252)
T 1t0b_A 38 ASYLAE-AGFDAATAVLDEPEHGLTDEVLDRCDVLVWWGHIA-HDEVK-------DEVVERVHRRVLEGMGLIVLHSGHF 108 (252)
T ss_dssp HHHHHH-TTCEEEEEESSSGGGGCCHHHHHTCSEEEEECSSC-GGGSC-------HHHHHHHHHHHHTTCEEEEEGGGGG
T ss_pred HHHHCC-CCCEEEEEECCCCCCCCCHHHCCCCCEEEEECCCC-CCCCC-------HHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 987533-88268999746753457954721368999938878-78589-------9999999999982998899961357
Q ss_pred HHEECCCHHHHHCCCCCCCE--EEEEEEEEECCCHHHHHHHCCC
Q ss_conf 01000001011012443324--5422576752523577641379
Q gi|254780971|r 91 ILVELNLLPGILMRNCSLKF--VCKQVLLEVVNSNTAFTKSYKM 132 (219)
Q Consensus 91 iL~elGLlPg~l~~N~s~rf--~~r~~~~~v~~~~s~~~~~~~~ 132 (219)
---...++-+. ...++ .-.+..+.+.+.+-|.++++..
T Consensus 109 ~~~~~~~~G~~----~~~~~~~~~~~~~v~v~~~~HPit~gl~~ 148 (252)
T 1t0b_A 109 SKIFKKLMGTT----CNLKWREADEKERLWVVAPGHPIVEGIGP 148 (252)
T ss_dssp SHHHHHHHCSC----CCCEEEEEEEEEEEEESCTTSGGGTTCCS
T ss_pred CCCHHHHHCCE----ECCCCCCCCEEEEEEECCCCCHHHHCCCC
T ss_conf 76326874773----14677989876899871699914426998
No 77
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=48.74 E-value=12 Score=17.17 Aligned_cols=49 Identities=18% Similarity=0.267 Sum_probs=21.7
Q ss_pred CCCCCEEEECC-CCC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHEE
Q ss_conf 45647899728-734-543114067752002121223322059717860640310100
Q gi|254780971|r 39 IPDVDLIVIPG-GFS-YGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQILVE 94 (219)
Q Consensus 39 l~~~d~lvipG-GFS-ygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQiL~e 94 (219)
..+.|++++|| +|. -|-+||=|+.....-+ . +.....+|+|--||++-+
T Consensus 113 ~~~iDlilVP~vafD~~G~RlG~GgGyYDR~L-~------~~~~~~igl~~~~Q~~~~ 163 (187)
T 1ydm_A 113 PSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYL-S------EYEGKTVSLLLECQLFAH 163 (187)
T ss_dssp GGGCCEEECCCSEEETTSCEECCSCCSTTTGG-G------TCCSEEEEECCGGGEESC
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCCCHHHHHH-H------HCCCCEEEEEEEEEEECC
T ss_conf 33355156215788577946227864888886-2------578988999976478167
No 78
>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} SCOP: c.124.1.6 PDB: 1u3f_A* 1u3g_A*
Probab=45.89 E-value=14 Score=16.80 Aligned_cols=48 Identities=23% Similarity=0.229 Sum_probs=23.2
Q ss_pred CCCCCEEEECC-CCC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHH
Q ss_conf 45647899728-734-543114067752002121223322059717860640310
Q gi|254780971|r 39 IPDVDLIVIPG-GFS-YGDYLRCGAIAARTPVMQAIKKKAQQGIKVMGICNGFQI 91 (219)
Q Consensus 39 l~~~d~lvipG-GFS-ygD~l~aG~i~~~~~~~~~i~~~~~~g~~vLGICNGfQi 91 (219)
..+.|++++|| +|. -|.+||=|...... .........+.+|+|--||+
T Consensus 121 P~~iDliiVP~laFD~~G~RLGyGgGyYDR-----~L~~~~~~~~~IGla~~~Q~ 170 (189)
T 1sbq_A 121 PNQIDCFLIPLVGFNKDNYRLGFGKGYYDR-----YLMQLTRQQPKIGIAYSFQK 170 (189)
T ss_dssp GGGCCEEEEECSEECTTCCEECCSSCHHHH-----HGGGCCSCCCEEEEECGGGB
T ss_pred CCCCCEEECCHHHEECCCEECCCCCCHHHH-----HHHHCCCCCCEEEEEEHHHC
T ss_conf 876676971357340577556779666889-----99866888868999724515
No 79
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=45.34 E-value=16 Score=16.50 Aligned_cols=36 Identities=19% Similarity=0.171 Sum_probs=22.2
Q ss_pred CEEEEEECCCCCCHHHHHHHHHH---HCCCCEEEEECCC
Q ss_conf 96899844970647999999998---5499639982154
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITK---IIGQSPILVWQSD 36 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~---~~~~~~~~v~~~~ 36 (219)
|||+||-+--+-.-..++.++.+ ..|.++.++...|
T Consensus 7 mKilivy~S~~GnT~~lA~~ia~g~~~~G~ev~~~~l~~ 45 (211)
T 1ydg_A 7 VKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 689999969984899999999999886597799997366
No 80
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=38.92 E-value=20 Score=15.88 Aligned_cols=85 Identities=15% Similarity=0.224 Sum_probs=53.3
Q ss_pred CEEEEEECCCCCCH---------------HHHHHHHHHHCCCCE--EEEECCCC----CCCCCCEEEECCCCCCCCCCCH
Q ss_conf 96899844970647---------------999999998549963--99821546----4456478997287345431140
Q gi|254780971|r 1 MKTAIVQIPGLNRD---------------NDMIKAITKIIGQSP--ILVWQSDT----DIPDVDLIVIPGGFSYGDYLRC 59 (219)
Q Consensus 1 mkvaVl~~pGsNcd---------------~e~~~A~~~~~~~~~--~~v~~~~~----~l~~~d~lvipGGFSygD~l~a 59 (219)
.|||||..=|.-.- ++-.-.++.+.|... ..+-..|. .++|+|.||=.|. -+.--..
T Consensus 439 ~kVAvLn~WGklRsW~~~mVaHal~~kq~ysY~GilEaLSG~p~dV~FISFdDi~~~gi~~didViINaGd--A~TA~SG 516 (759)
T 2zuv_A 439 LNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLAHGIDSDIDVIINGGP--VDTAFTG 516 (759)
T ss_dssp SEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHHHHHHHCCCTTCCEEEEEEC--TTSTTTC
T ss_pred CEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCCCEEEECCC--CCCCCCC
T ss_conf 34999814002035765414205550100207779988559960479954899865299867878995676--5554667
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECC
Q ss_conf 6775200212122332205971786064
Q gi|254780971|r 60 GAIAARTPVMQAIKKKAQQGIKVMGICN 87 (219)
Q Consensus 60 G~i~~~~~~~~~i~~~~~~g~~vLGICN 87 (219)
|..|++..+...|++|..+|+-.+||+-
T Consensus 517 G~~W~d~~i~~~ir~fV~~GGGfIGVGe 544 (759)
T 2zuv_A 517 GDVWTNPKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp GGGGGCHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEECC
T ss_conf 4113775999999999983895788168
No 81
>1ug8_A Poly(A)-specific ribonuclease; R3H domain, poly(A)-specific 3'-exoribonuclease, PARN, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.68.7.1
Probab=38.37 E-value=9.4 Score=17.93 Aligned_cols=26 Identities=27% Similarity=0.365 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHC---CCEEEEECCCHHHH
Q ss_conf 212122332205---97178606403101
Q gi|254780971|r 67 PVMQAIKKKAQQ---GIKVMGICNGFQIL 92 (219)
Q Consensus 67 ~~~~~i~~~~~~---g~~vLGICNGfQiL 92 (219)
.+.+.|.+|.+. ....|.-|||||=-
T Consensus 15 ~i~erIeefL~~~e~k~l~lepCngFqRK 43 (87)
T 1ug8_A 15 QVIEKIEDFLQSEEKRSLELDPCTGFQRK 43 (87)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCCSHHHH
T ss_pred HHHHHHHHHHCCCCCCEEECCCCCHHHHH
T ss_conf 99999999970876561464887179999
No 82
>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family protein; 10- methenyltetrahydrofolate synthetase, MTHFS, folate metabolism, structural genomics; HET: ADP; 1.6A {Bacillus anthracis}
Probab=38.35 E-value=20 Score=15.82 Aligned_cols=12 Identities=17% Similarity=0.490 Sum_probs=5.6
Q ss_pred EEEECCCHHHHE
Q ss_conf 786064031010
Q gi|254780971|r 82 VMGICNGFQILV 93 (219)
Q Consensus 82 vLGICNGfQiL~ 93 (219)
.+|+|--||++-
T Consensus 162 ~igl~~~~Q~~~ 173 (200)
T 2jcb_A 162 TLSLAYSFQMVE 173 (200)
T ss_dssp EEEECCGGGBCS
T ss_pred EEEEEEHHEECC
T ss_conf 999983430718
No 83
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence of substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=37.66 E-value=20 Score=15.75 Aligned_cols=46 Identities=13% Similarity=0.299 Sum_probs=30.1
Q ss_pred CCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 96899862013302330867741154225036531688888988112
Q gi|254780971|r 133 NQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD 179 (219)
Q Consensus 133 ~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~ 179 (219)
.++..+|.. .|+.|..|.+.+++...++--++-++.|+||.|....
T Consensus 133 ~~~~~v~~~-~~~~~~~d~~~l~~~~~~~~~~i~~~~P~NPtG~~~s 178 (389)
T 1gd9_A 133 GKPVEVPTY-EEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLT 178 (389)
T ss_dssp CEEEEEECC-GGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred CEEEEEECC-CCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCC
T ss_conf 989997422-6668877999999737679838998699897163589
No 84
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C- terminal domain, open alpha-beta structure.; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=36.42 E-value=21 Score=15.63 Aligned_cols=60 Identities=17% Similarity=0.356 Sum_probs=37.0
Q ss_pred CCCEEEEEEECCCEEEEECHHHHHHHHHCCEE-EEECCCCCCCCCCCCC------EEEEECCCCCEE
Q ss_conf 99689986201330233086774115422503-6531688888988112------668886999899
Q gi|254780971|r 132 MNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQI-VFRYASGTNPNGSLHD------IAGVINRRGNVL 191 (219)
Q Consensus 132 ~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i-~~~Y~d~~NPNGS~~~------IAgi~s~~G~vl 191 (219)
...++++|....++.|..+.+.++....+..+ ++-.+.|+||.|.... |+.+|.+.+-.+
T Consensus 132 g~~~v~v~~~~~~~~~~~d~~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~i 198 (390)
T 1d2f_A 132 QRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRV 198 (390)
T ss_dssp TCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEE
T ss_pred CCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHCEEEE
T ss_conf 8758997643378885457888655304778279998999898766403999999877676530489
No 85
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium LT2}
Probab=36.10 E-value=17 Score=16.31 Aligned_cols=72 Identities=28% Similarity=0.321 Sum_probs=39.2
Q ss_pred EEEEEECCCCCCHHHHHHH----HHHHCCCCEEEEECC--------------CCCCCCCCEEEECCCCCCCCCCCHHHHH
Q ss_conf 6899844970647999999----998549963998215--------------4644564789972873454311406775
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKA----ITKIIGQSPILVWQS--------------DTDIPDVDLIVIPGGFSYGDYLRCGAIA 63 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A----~~~~~~~~~~~v~~~--------------~~~l~~~d~lvipGGFSygD~l~aG~i~ 63 (219)
||+|+.-|+.-.-.+.+.. +.+ -+.++.+-... +....+.|++|.-|| | |.
T Consensus 7 ~Igiv~~~~~~~~~~~~~~i~~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~iGG----D----GT-- 75 (292)
T 2an1_A 7 CIGIVGHPRHPTALTTHEMLYRWLCD-QGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGG----D----GN-- 75 (292)
T ss_dssp EEEEECC-------CHHHHHHHHHHH-TTCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSC----H----HH--
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHH-CCCEEEECHHHHHHCCCCCCCCCCHHHCCCCCCEEEEECC----C----HH--
T ss_conf 89999539998999999999999997-8899999688886648777775544450557778999926----8----57--
Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 2002121223322059717860640
Q gi|254780971|r 64 ARTPVMQAIKKKAQQGIKVMGICNG 88 (219)
Q Consensus 64 ~~~~~~~~i~~~~~~g~~vLGICNG 88 (219)
+..+.+.+.+.+.|+|||--|
T Consensus 76 ----~L~a~~~~~~~~~PilGIn~G 96 (292)
T 2an1_A 76 ----MLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp ----HHHHHHHHTTSSCEEEEBCSS
T ss_pred ----HHHHHHHHCCCCCCEEEEECC
T ss_conf ----999999837689838987658
No 86
>3cni_A Putative ABC type-2 transporter; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Thermotoga maritima MSB8}
Probab=35.19 E-value=22 Score=15.50 Aligned_cols=49 Identities=33% Similarity=0.336 Sum_probs=32.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCC-----CC--CCCC-EEEECCCCC
Q ss_conf 9689984497064799999999854996399821546-----44--5647-899728734
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVWQSDT-----DI--PDVD-LIVIPGGFS 52 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~~~~~-----~l--~~~d-~lvipGGFS 52 (219)
+||||+.+-++..-++..+.|.+. ..+.+...+. .+ .+++ .|+||-||+
T Consensus 11 ~kiaivd~D~s~~s~~~~~~L~~~---~~~~~~~~d~~eA~~~l~~g~~~~vivIP~~Fs 67 (156)
T 3cni_A 11 QKVAIVREDTGTIAELAEKALGNM---VDIVYAGSDLKEAEEAVKKEKAPAIIVIPKGFS 67 (156)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHTS---SEEEEEESCHHHHHHHHHHHTCSEEEEECTTHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHCCCEEEEEEECCCHH
T ss_conf 859999899997999999986169---965899799999999998398679999883478
No 87
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=34.25 E-value=23 Score=15.41 Aligned_cols=47 Identities=21% Similarity=0.357 Sum_probs=31.5
Q ss_pred CCEEEEEEE---CCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 968998620---13302330867741154225036531688888988112
Q gi|254780971|r 133 NQIIKCPVA---HHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD 179 (219)
Q Consensus 133 ~~~l~~pia---HgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~ 179 (219)
..++.+++- .-|.+|..|.+.+++....+-.++-++.|+||.|....
T Consensus 148 ~~~v~v~~~~~~~~~~~~~~d~~~l~~~i~~~~~~i~l~~P~NPtG~~~~ 197 (407)
T 3nra_A 148 GEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYS 197 (407)
T ss_dssp CEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCC
T ss_pred CCCCCEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCH
T ss_conf 94532010224466556798999999735769859999589898776520
No 88
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus HB8} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=30.08 E-value=24 Score=15.29 Aligned_cols=55 Identities=11% Similarity=0.189 Sum_probs=31.2
Q ss_pred CCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC------EEEEECCCC
Q ss_conf 96899862013302330867741154225036531688888988112------668886999
Q gi|254780971|r 133 NQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD------IAGVINRRG 188 (219)
Q Consensus 133 ~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~------IAgi~s~~G 188 (219)
-.++.++. ..++.|..+.+.+++.....-.++-++.|.||.|.... |+-+|.+.+
T Consensus 137 ~~~~~~~~-~~~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPTG~~~s~~~l~~l~~~a~~~~ 197 (385)
T 1b5p_A 137 GVVVEVET-LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHD 197 (385)
T ss_dssp CEEEEEEC-CGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred CEEEEEEC-CCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 96899962-42114578999999737889769998999899672289999999999999859
No 89
>3ej6_A Catalase-3; heme, hydrogen peroxide, iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=28.27 E-value=29 Score=14.77 Aligned_cols=25 Identities=12% Similarity=0.159 Sum_probs=9.0
Q ss_pred HHHHHHCCCEEEEECCCHHHHEECC
Q ss_conf 2332205971786064031010000
Q gi|254780971|r 72 IKKKAQQGIKVMGICNGFQILVELN 96 (219)
Q Consensus 72 i~~~~~~g~~vLGICNGfQiL~elG 96 (219)
+.+..+-.|+|-.+-.|-++|-.+|
T Consensus 623 ~~~~~~h~k~i~~~~~~~~~~~~~~ 647 (688)
T 3ej6_A 623 LTDGYRWGKPVAAVGSAKKALQSIG 647 (688)
T ss_dssp HHHHHHTTCCEEEEGGGHHHHHHTT
T ss_pred HHHHHHCCCEEEECCCHHHHHHHCC
T ss_conf 9998744686998635799999759
No 90
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structural protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=27.57 E-value=30 Score=14.70 Aligned_cols=42 Identities=26% Similarity=0.373 Sum_probs=27.6
Q ss_pred HHHHHHHHHHCCCCEEEEEC-CCC----------CCCCCCEEEECCCCCCCCC
Q ss_conf 99999999854996399821-546----------4456478997287345431
Q gi|254780971|r 15 NDMIKAITKIIGQSPILVWQ-SDT----------DIPDVDLIVIPGGFSYGDY 56 (219)
Q Consensus 15 ~e~~~A~~~~~~~~~~~v~~-~~~----------~l~~~d~lvipGGFSygD~ 56 (219)
.-|..|+-+..|.++....+ .|. .+.++|.+|.-||-|.||+
T Consensus 210 ~~~l~a~l~~~G~~~~~~~~v~Dd~~~l~~~l~~~~~~~DivIttGG~S~G~~ 262 (419)
T 2fts_A 210 RSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEK 262 (419)
T ss_dssp HHHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHHHHCSEEEEESCCSSSCC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCC
T ss_conf 57799999977994798444489989999999999863371772067778833
No 91
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=26.09 E-value=32 Score=14.53 Aligned_cols=87 Identities=14% Similarity=0.156 Sum_probs=40.6
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEE-CCC------------------------CCCCCCCEEEECCCCCCCC
Q ss_conf 968998449706479999999985499639982-154------------------------6445647899728734543
Q gi|254780971|r 1 MKTAIVQIPGLNRDNDMIKAITKIIGQSPILVW-QSD------------------------TDIPDVDLIVIPGGFSYGD 55 (219)
Q Consensus 1 mkvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v~-~~~------------------------~~l~~~d~lvipGGFSygD 55 (219)
|||+||=. |.-+ +..++++.+ ...+.+. .+. ..+.++|++|..-|.+|+.
T Consensus 17 mki~vlG~-G~vG-~~~~~~L~~---~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~d~Vi~~~~~~~~~ 91 (365)
T 2z2v_A 17 MKVLILGA-GNIG-RAIAWDLKD---EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF 91 (365)
T ss_dssp CEEEEECC-SHHH-HHHHHHHTT---TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH
T ss_pred CEEEEECC-CHHH-HHHHHHHHC---CCCEEEEECCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEEEECCCCCCHH
T ss_conf 57999997-5999-999999864---798699987788899877427736873499999999973589999967851025
Q ss_pred CCCHHHHHHHHH---------HHHHHHHHHHCCCEEEEECCCHHHHEECCCHHH
Q ss_conf 114067752002---------121223322059717860640310100000101
Q gi|254780971|r 56 YLRCGAIAARTP---------VMQAIKKKAQQGIKVMGICNGFQILVELNLLPG 100 (219)
Q Consensus 56 ~l~aG~i~~~~~---------~~~~i~~~~~~g~~vLGICNGfQiL~elGLlPg 100 (219)
.+--.++.+... ..+.+.+.+++ +|..++..+|+.||
T Consensus 92 ~v~~~~~~~g~~yiD~~~~~~~~~~l~~~a~~--------~g~~~i~~~G~~PG 137 (365)
T 2z2v_A 92 KSIKAAIKSKVDMVDVSFMPENPLELRDEAEK--------AQVTIVFDAGFAPG 137 (365)
T ss_dssp HHHHHHHHTTCCEEECCCCSSCGGGGHHHHHH--------TTCEEECSCBTTTB
T ss_pred HHHHHHHHCCCCCCCCCCCCCEEECCCCHHCC--------CCCEEEECCCCCCC
T ss_conf 89999875285221122354111112100115--------78237861478866
No 92
>1sou_A 5,10-methenyltetrahydrofolate synthetase; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Aquifex aeolicus} SCOP: c.124.1.6
Probab=25.43 E-value=33 Score=14.45 Aligned_cols=13 Identities=23% Similarity=0.511 Sum_probs=6.5
Q ss_pred EEEEECCCHHHHE
Q ss_conf 1786064031010
Q gi|254780971|r 81 KVMGICNGFQILV 93 (219)
Q Consensus 81 ~vLGICNGfQiL~ 93 (219)
..+|+|--||+.-
T Consensus 146 ~~igl~~~~Q~~~ 158 (194)
T 1sou_A 146 LKVGVAYSFQVFE 158 (194)
T ss_dssp EEEEECCGGGBCS
T ss_pred CEEEEEEHHHCCC
T ss_conf 8899972561418
No 93
>3d6k_A Putative aminotransferase; APC82464, structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=25.03 E-value=33 Score=14.40 Aligned_cols=62 Identities=19% Similarity=0.277 Sum_probs=39.1
Q ss_pred HHHHCCCCCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCC--CCCCCCCC------EEEEECCCCCEEE
Q ss_conf 7641379968998620133023308677411542250365316888--88988112------6688869998999
Q gi|254780971|r 126 FTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGT--NPNGSLHD------IAGVINRRGNVLG 192 (219)
Q Consensus 126 ~~~~~~~~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~--NPNGS~~~------IAgi~s~~G~vlg 192 (219)
..+.. ..+++++|. +.+| .+.+.++++..+.....-|+.++ ||.|.... |+-+|.....++-
T Consensus 147 ~~~~~-G~~~v~vp~-~~~g---~d~~~le~~~~~~~~~~i~~~pn~~NPTG~v~s~~~l~~i~~la~~~~~~~I 216 (422)
T 3d6k_A 147 ITEHF-GFEMINVPM-TDEG---PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRI 216 (422)
T ss_dssp HHHHH-TCEEEEEEE-ETTE---ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEE
T ss_pred HHHHC-CCEEEEEEE-CCCC---CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf 99986-998999740-7999---9999999983158973999669999999832889999999999986798788
No 94
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis W83}
Probab=23.97 E-value=35 Score=14.27 Aligned_cols=58 Identities=9% Similarity=0.068 Sum_probs=31.7
Q ss_pred CCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC------EEEEECCCCCEE
Q ss_conf 96899862013302330867741154225036531688888988112------668886999899
Q gi|254780971|r 133 NQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD------IAGVINRRGNVL 191 (219)
Q Consensus 133 ~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~------IAgi~s~~G~vl 191 (219)
.+++.+|... +..+..+++..+.+......++-++.|+||.|.... |+.+|.+.+-.+
T Consensus 155 ~~~~~v~~~~-~~~~~l~~~~~~~~~~~~~~~ivl~~P~NPTG~~~s~e~~~~i~~~a~~~~~~v 218 (437)
T 3g0t_A 155 QKFESFDLFE-YRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIV 218 (437)
T ss_dssp CCCEEEEGGG-GCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCCCCC-CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 7543333322-345212799999853799459995899899877531268999988752587689
No 95
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=23.59 E-value=35 Score=14.23 Aligned_cols=56 Identities=14% Similarity=0.262 Sum_probs=31.7
Q ss_pred CEEEEEECCCCCCHH-----HHH-HHHHHHCCCCEEEE-ECCCC------------CCCCCCEEEECCCCCCCCCC
Q ss_conf 968998449706479-----999-99998549963998-21546------------44564789972873454311
Q gi|254780971|r 1 MKTAIVQIPGLNRDN-----DMI-KAITKIIGQSPILV-WQSDT------------DIPDVDLIVIPGGFSYGDYL 57 (219)
Q Consensus 1 mkvaVl~~pGsNcd~-----e~~-~A~~~~~~~~~~~v-~~~~~------------~l~~~d~lvipGGFSygD~l 57 (219)
+|||||+--=+.+++ .+. ..+++ .|+++... ...|. .-.++|+++.-||-|.|++-
T Consensus 11 ~rvavitvsD~rg~~~D~nGp~L~~~l~~-~G~~v~~~~iv~Dd~~~~~~~l~~~~~~~~~dlIiTtGGtg~g~~D 85 (172)
T 1mkz_A 11 TRIAILTVSNRRGEEDDTSGHYLRDSAQE-AGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGD 85 (172)
T ss_dssp CEEEEEEECSSCCGGGCHHHHHHHHHHHH-TTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTC
T ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCEECCCCC
T ss_conf 68999998489886766739999999998-5995776310588579999999998762567615852531347776
No 96
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=23.55 E-value=34 Score=14.39 Aligned_cols=22 Identities=18% Similarity=0.119 Sum_probs=11.0
Q ss_pred CCCEEEEECH---HHHHHHHHCCEE
Q ss_conf 1330233086---774115422503
Q gi|254780971|r 142 HHDGNYFIDA---KGLAEIEKNNQI 163 (219)
Q Consensus 142 HgEGrf~~~~---~~l~~l~~~~~i 163 (219)
-|-|+.-.+. +.+++..+++-+
T Consensus 262 ~G~Gnvp~~~~~~~~l~~a~~~gip 286 (358)
T 2him_A 262 YGVGNAPQNKAFLQELQEASDRGIV 286 (358)
T ss_dssp BTTTBCCCCHHHHHHHHHHHHTTCE
T ss_pred ECCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 2798887407899999999737987
No 97
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=22.86 E-value=37 Score=14.14 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=18.0
Q ss_pred EEEECHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 233086774115422503653168888898811
Q gi|254780971|r 146 NYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLH 178 (219)
Q Consensus 146 rf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~ 178 (219)
+|..|.+.+.+.......+.=.|.|+||.|++.
T Consensus 181 ~~~~D~~~~~~~~~~~~kii~l~nPnNPTG~l~ 213 (427)
T 2hox_A 181 VWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLR 213 (427)
T ss_dssp EEEEEGGGGTTCSCGGGEEEEEESSCTTTCCCC
T ss_pred CCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCH
T ss_conf 148999999850788956999808979857451
No 98
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=22.70 E-value=37 Score=14.12 Aligned_cols=49 Identities=20% Similarity=0.288 Sum_probs=26.6
Q ss_pred CCCCEEEECC-C---CCCCCCCCHHH------HHH-HHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 5647899728-7---34543114067------752-002121223322059717860640
Q gi|254780971|r 40 PDVDLIVIPG-G---FSYGDYLRCGA------IAA-RTPVMQAIKKKAQQGIKVMGICNG 88 (219)
Q Consensus 40 ~~~d~lvipG-G---FSygD~l~aG~------i~~-~~~~~~~i~~~~~~g~~vLGICNG 88 (219)
++.+.+||-| | ||.||.+..-. ... .....+.......-.+|+++..||
T Consensus 55 ~~~~~vVl~g~g~~~F~~G~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIaav~G 114 (272)
T 1hzd_A 55 KKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDG 114 (272)
T ss_dssp SSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEESE
T ss_pred CCCEEEEEECCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 996499996278871135510001100120344566778999999999789989999788
No 99
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, PSI-2, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=22.26 E-value=38 Score=14.06 Aligned_cols=24 Identities=29% Similarity=0.332 Sum_probs=18.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEE
Q ss_conf 6899844970647999999998549963998
Q gi|254780971|r 2 KTAIVQIPGLNRDNDMIKAITKIIGQSPILV 32 (219)
Q Consensus 2 kvaVl~~pGsNcd~e~~~A~~~~~~~~~~~v 32 (219)
|+||+ +|+|+.--|. ++|...++.
T Consensus 11 ~IaVI------Gd~dtv~GFr-LaGi~~v~~ 34 (102)
T 2i4r_A 11 MLAVV------GDPDFTIGFM-LAGISDIYE 34 (102)
T ss_dssp EEEEE------ECHHHHHHHH-HTTCCCEEE
T ss_pred EEEEE------ECHHHHHHHH-HCCCCCEEC
T ss_conf 99999------4889889899-828872056
No 100
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=22.22 E-value=38 Score=14.06 Aligned_cols=42 Identities=24% Similarity=0.298 Sum_probs=26.7
Q ss_pred HHHHHHHHHHCCCCEEEEE-CCCC----------CCCCCCEEEECCCCCCCCC
Q ss_conf 9999999985499639982-1546----------4456478997287345431
Q gi|254780971|r 15 NDMIKAITKIIGQSPILVW-QSDT----------DIPDVDLIVIPGGFSYGDY 56 (219)
Q Consensus 15 ~e~~~A~~~~~~~~~~~v~-~~~~----------~l~~~d~lvipGGFSygD~ 56 (219)
.-|..|+-+..|.++.... ..|. .+.++|+++.-||-|.||+
T Consensus 209 ~~~l~a~l~~~G~~~~~~~~~~D~~~~i~~~i~~~~~~~DivIttGG~S~G~~ 261 (402)
T 1uz5_A 209 GRALCDAINELGGEGIFMGVARDDKESLKALIEKAVNVGDVVVISGGASGGTK 261 (402)
T ss_dssp HHHHHHHHHHHTSEEEEEEEECSSHHHHHHHHHHHHHHCSEEEEECCC-----
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
T ss_conf 99999999866972776266685689999987632223544787547558852
No 101
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg, hyperthermophIle; HET: PLP; 2.33A {Pyrococcus furiosus dsm 3638} SCOP: c.67.1.1
Probab=21.65 E-value=39 Score=13.98 Aligned_cols=46 Identities=13% Similarity=0.240 Sum_probs=27.6
Q ss_pred CCEEEEEEECCCEEEEECHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 96899862013302330867741154225036531688888988112
Q gi|254780971|r 133 NQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD 179 (219)
Q Consensus 133 ~~~l~~piaHgEGrf~~~~~~l~~l~~~~~i~~~Y~d~~NPNGS~~~ 179 (219)
.+++.+|... +..+..+.+.+++...++..++-++.|+||.|....
T Consensus 147 ~~~v~~~~~~-~~~~~~~~e~l~~~~~~~~~~~~l~~P~NPTG~~~s 192 (406)
T 1xi9_A 147 GKPVEYRTIE-EEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYD 192 (406)
T ss_dssp CEEEEEEEEG-GGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred CEEEEEECCC-CCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHH
T ss_conf 8799973432-247787999999865447828999289898743422
Done!