RPSBLAST alignment of GI: 254780971 and protein with PDBid: 3fij

>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Length = 254
 Score = 41.4 bits (96), Expect = 1e-04
 Identities = 37/222 (16%), Positives = 67/222 (30%), Gaps = 33/222 (14%)

Query: 15  NDMIKAITKIIGQSPILVWQSDTDIPD-----VDLIVIPGGFSYGDYLRCGAIAARTPV- 68
              + AI K+ G  PI +   D          VD +++ GG      L     +      
Sbjct: 31  QRYVDAIQKV-GGFPIALPIDDPSTAVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAY 89

Query: 69  --------MQAIKKKAQQGIKVMGICNGFQILVELNLLPGILMRNCSLKFVCKQVLLEVV 120
                   +  ++     G  +  IC G Q++              +L     QV  + +
Sbjct: 90  FPPRDSYEIALVRAALDAGKPIFAICRGMQLVNV--------ALGGTLYQDISQVETKAL 141

Query: 121 NSNTAFTKSYKMNQIIKCPVAHHDGNYFIDAKGLAEIEKNNQIVFRYASGTNPNGSLHD- 179
                  +    + I   P +    ++            ++Q + + A          D 
Sbjct: 142 QHLQRVDEQLGSHTIDIEPTSELAKHHPNKKL---VNSLHHQFIKKLAPSFKVTARTADG 198

Query: 180 -IAGVI--NRRGNVLGMMPHPENIIEKFHGGIDGRGLFASLL 218
            I  V   N     LG+  HPE +   F    +   LF +L+
Sbjct: 199 MIEAVEGDNLPSWYLGVQWHPELM---FQTDPESEQLFQALV 237