Query gi|254780972|ref|YP_003065385.1| phosphoribosylformylglycinamidine synthase, PurS protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 84
No_of_seqs 101 out of 950
Neff 5.4
Searched_HMMs 13730
Date Wed Jun 1 10:58:07 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780972.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t4aa_ d.284.1.1 (A:) PurS su 100.0 4.7E-31 3.4E-35 199.1 10.9 80 1-81 1-80 (80)
2 d1gtda_ d.284.1.1 (A:) PurS su 100.0 1.1E-29 8E-34 191.1 11.9 81 2-83 2-82 (82)
3 d1vq3a_ d.284.1.1 (A:) PurS su 100.0 2.3E-29 1.7E-33 189.3 11.2 79 1-79 7-85 (86)
4 d1t3ta3 d.284.1.2 (A:1-152) FG 90.8 0.32 2.3E-05 26.4 6.1 67 5-76 74-140 (152)
5 d1yema_ d.63.1.2 (A:) Hypothet 75.0 3.1 0.00023 20.7 6.6 50 19-68 80-150 (163)
6 d1tr0a_ d.58.4.4 (A:) Boiling 68.5 3.3 0.00024 20.5 4.3 41 1-41 6-48 (106)
7 d1mo1a_ d.94.1.1 (A:) Crh, cat 44.7 11 0.00083 17.4 4.4 67 1-72 1-86 (87)
8 d1xrsb2 d.230.4.1 (B:33-84) D- 42.9 12 0.00089 17.2 4.2 33 42-74 3-36 (52)
9 d1q4ra_ d.58.4.4 (A:) Hypothet 40.5 12 0.00085 17.3 3.2 39 4-42 4-44 (103)
10 d1cm3a_ d.94.1.1 (A:) Histidin 39.7 14 0.001 16.9 6.4 64 1-65 1-83 (85)
11 d2hpra_ d.94.1.1 (A:) Histidin 37.5 15 0.0011 16.7 3.4 29 36-64 53-81 (87)
12 d2aw0a_ d.58.17.1 (A:) Menkes 31.7 19 0.0013 16.2 3.2 30 18-49 17-49 (72)
13 d1q8la_ d.58.17.1 (A:) Menkes 31.7 19 0.0014 16.2 3.9 26 5-32 48-73 (84)
14 d1cpza_ d.58.17.1 (A:) Copper 31.4 19 0.0014 16.1 4.0 25 6-32 40-64 (68)
15 d1ptfa_ d.94.1.1 (A:) Histidin 31.1 19 0.0014 16.1 6.7 63 1-64 1-82 (87)
16 d1pcha_ d.94.1.1 (A:) Histidin 28.9 21 0.0015 15.9 3.9 29 35-63 52-80 (88)
17 d1p6ta1 d.58.17.1 (A:1-72) Pot 27.4 22 0.0016 15.7 3.2 30 19-50 21-53 (72)
18 d1ka5a_ d.94.1.1 (A:) Histidin 25.1 24 0.0018 15.5 6.7 63 1-63 1-81 (88)
19 d2qifa1 d.58.17.1 (A:1-69) Cop 25.0 24 0.0018 15.5 3.8 29 19-49 17-48 (69)
20 d1o7za_ d.9.1.1 (A:) IP-10/CXC 23.6 15 0.0011 16.7 1.4 27 3-29 30-60 (61)
21 d2dlba1 b.174.1.1 (A:2002-2071 21.6 29 0.0021 15.1 4.7 44 34-77 4-56 (70)
22 d1osda_ d.58.17.1 (A:) Mercuri 21.4 29 0.0021 15.0 3.5 10 20-29 19-28 (72)
No 1
>d1t4aa_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=99.97 E-value=4.7e-31 Score=199.08 Aligned_cols=80 Identities=36% Similarity=0.667 Sum_probs=77.1
Q ss_pred CEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
Q ss_conf 95999999958866687789999998628864200002301899997389989999999999998479761247999999
Q gi|254780972|r 1 MIKANVVVKLKKDVLDPQGKALKTALSNIGFHNINQIRQGKIFDIEMDETLSDIAEEELESICQNLLANPVIEDYDIKVQ 80 (84)
Q Consensus 1 m~k~~V~V~lK~gVlDPqG~aV~~aL~~lG~~~v~~vr~GK~iei~i~~~~~~~a~~~v~~~c~~lLaNpvIE~y~i~i~ 80 (84)
||+++|+|+|||||+||||+||+++|++|||+++++||+||+|+|+++++++ +|.+++++||++||+|||||+|+|+++
T Consensus 1 m~k~~V~V~lK~gVlDPqG~ai~~aL~~lG~~~v~~vr~GK~i~l~i~~~~~-~a~~~v~~~c~~lLaNpvIE~y~i~i~ 79 (80)
T d1t4aa_ 1 MYKVKVYVSLKESVLDPQGSAVQHALHSMTYNEVQDVRIGKYMELTIEKSDR-DLDVLVKEMCEKLLANTVIEDYRYEVE 79 (80)
T ss_dssp CEEEEEEEEECTTSCCHHHHHHHHHHHHTTCTTEEEEEEEEEEEEEECCCSS-CHHHHHHHHHHHTTCCTTTEEEEEEEE
T ss_pred CEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCHH-HHHHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 9699999997998728179999999986597666557888699999759849-999999999998649755267999997
Q ss_pred E
Q ss_conf 7
Q gi|254780972|r 81 K 81 (84)
Q Consensus 81 e 81 (84)
|
T Consensus 80 e 80 (80)
T d1t4aa_ 80 E 80 (80)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 2
>d1gtda_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=99.96 E-value=1.1e-29 Score=191.12 Aligned_cols=81 Identities=33% Similarity=0.669 Sum_probs=79.0
Q ss_pred EEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
Q ss_conf 59999999588666877899999986288642000023018999973899899999999999984797612479999997
Q gi|254780972|r 2 IKANVVVKLKKDVLDPQGKALKTALSNIGFHNINQIRQGKIFDIEMDETLSDIAEEELESICQNLLANPVIEDYDIKVQK 81 (84)
Q Consensus 2 ~k~~V~V~lK~gVlDPqG~aV~~aL~~lG~~~v~~vr~GK~iei~i~~~~~~~a~~~v~~~c~~lLaNpvIE~y~i~i~e 81 (84)
|+++|.|+|||||+||||+||+++|++|||+ +.+||+||+|+|+++++|++.|++++++||++||+|||||+|+|++++
T Consensus 2 f~v~V~V~lK~gVlDPqG~ai~~aL~~lG~~-v~~Vr~gK~~~l~i~~~~~e~a~~~v~~~c~~lLaNpvIE~y~i~i~e 80 (82)
T d1gtda_ 2 FMVEVRIRLKKGMLNPEAATIERALALLGYE-VEDTDTTDVITFTMDEDSLEAVEREVEDMCQRLLCNPVIHDYDVSINE 80 (82)
T ss_dssp EEEEEEEEECTTSCCHHHHHHHHHHHHHTCC-CEEEEEEEEEEEEECCSCHHHHHHHHHHHHHHTTCCTTTEEEEEEEEE
T ss_pred EEEEEEEEECCCCCCCHHHHHHHHHHHCCCC-CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 5999999979987282799999999975997-413798789999972799899999999999987088665789999997
Q ss_pred CC
Q ss_conf 17
Q gi|254780972|r 82 SS 83 (84)
Q Consensus 82 ~~ 83 (84)
.+
T Consensus 81 ~s 82 (82)
T d1gtda_ 81 MS 82 (82)
T ss_dssp C-
T ss_pred CC
T ss_conf 89
No 3
>d1vq3a_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=99.96 E-value=2.3e-29 Score=189.31 Aligned_cols=79 Identities=27% Similarity=0.538 Sum_probs=76.8
Q ss_pred CEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE
Q ss_conf 9599999995886668778999999862886420000230189999738998999999999999847976124799999
Q gi|254780972|r 1 MIKANVVVKLKKDVLDPQGKALKTALSNIGFHNINQIRQGKIFDIEMDETLSDIAEEELESICQNLLANPVIEDYDIKV 79 (84)
Q Consensus 1 m~k~~V~V~lK~gVlDPqG~aV~~aL~~lG~~~v~~vr~GK~iei~i~~~~~~~a~~~v~~~c~~lLaNpvIE~y~i~i 79 (84)
||+++|+|+|||||+||||+||+++|.++||+++++||+||+|+|++++.|++.|++++++||++||+|||||+|+|+.
T Consensus 7 ~~k~~V~V~~K~gVlDPqG~av~~aL~~lG~~~v~~vr~gK~~~~~i~~~d~e~a~~~v~~~c~~lLaNpvIE~y~i~~ 85 (86)
T d1vq3a_ 7 LFKFAIDVQYRSNVRDPRGETIERVLREEKGLPVKKLRLGKSIHLEVEAENKEKAYEIVKKACEELLVNPVVEEYEVRE 85 (86)
T ss_dssp EEEEEEEEEECTTSCCHHHHHHHHHHHHTTCCCEEEEEEEEEEEEEEECSSHHHHHHHHHHHHHHTTSCTTTEEEEEEE
T ss_pred EEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 3899999998998727179999999987278776606888899999806998999999999999871776503899997
No 4
>d1t3ta3 d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like domain {Salmonella typhimurium [TaxId: 90371]}
Probab=90.83 E-value=0.32 Score=26.39 Aligned_cols=67 Identities=13% Similarity=0.219 Sum_probs=52.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 999995886668778999999862886420000230189999738998999999999999847976124799
Q gi|254780972|r 5 NVVVKLKKDVLDPQGKALKTALSNIGFHNINQIRQGKIFDIEMDETLSDIAEEELESICQNLLANPVIEDYD 76 (84)
Q Consensus 5 ~V~V~lK~gVlDPqG~aV~~aL~~lG~~~v~~vr~GK~iei~i~~~~~~~a~~~v~~~c~~lLaNpvIE~y~ 76 (84)
-++|.||.|..-|=..-...-.++-|++.|..+--|+.|.++-...+.++ ..-+..+|..+..|..-
T Consensus 74 ~~~V~PR~gtiSPWSSKAtdI~~~cGl~~V~RIERg~~y~~~~~~~~~~~-----~~~~~~~L~DrMTE~v~ 140 (152)
T d1t3ta3 74 LLLVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAYYIEASTLTAEQ-----WRQVAAELHDRMMETVF 140 (152)
T ss_dssp EEEEEECTTCCCHHHHHHHHHHHHTTCTTEEEEEEEEEEEEECTTCCHHH-----HHHHHHTTSCTTTEEEE
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHCCCCHHHEEEEEEEEEECCCCCCHHH-----HHHHHHHCCCCCHHHHH
T ss_conf 69996036501541888999999829830230200478884388778899-----98877645377678886
No 5
>d1yema_ d.63.1.2 (A:) Hypothetical protein PF0863 {Pyrococcus furiosus [TaxId: 2261]}
Probab=74.96 E-value=3.1 Score=20.67 Aligned_cols=50 Identities=22% Similarity=0.310 Sum_probs=40.7
Q ss_pred HHHHHHHHHHCCCCCCCEEE--------------------EEEEEEEEECCCCHHHHHHHHHHHHHHH-CC
Q ss_conf 89999998628864200002--------------------3018999973899899999999999984-79
Q gi|254780972|r 19 GKALKTALSNIGFHNINQIR--------------------QGKIFDIEMDETLSDIAEEELESICQNL-LA 68 (84)
Q Consensus 19 G~aV~~aL~~lG~~~v~~vr--------------------~GK~iei~i~~~~~~~a~~~v~~~c~~l-La 68 (84)
+.+....|..|||..+-.++ .|.++||++..++.+.|.+.+..+.++| |.
T Consensus 80 ~~~~~~~l~~lg~~~~~~~~K~R~~y~~~~~~i~lD~v~~lg~f~EiE~~~~~~~~~~~~i~~l~~~Lgl~ 150 (163)
T d1yema_ 80 FEKAVEVFKRLGFKIQATIKKKRWVYKLNGVTLEVNRVEGIGDFVDIEVISDSPEEAKEKIWEVAKMLGLK 150 (163)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECSCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCEEEEEEEEEEEEEEECCEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCC
T ss_conf 68898778625844789999999999979999999821797737999998447378999999999982979
No 6
>d1tr0a_ d.58.4.4 (A:) Boiling stable protein 1 {European aspen (Populus tremula) [TaxId: 113636]}
Probab=68.51 E-value=3.3 Score=20.49 Aligned_cols=41 Identities=12% Similarity=0.280 Sum_probs=35.7
Q ss_pred CEEEEEEEEECCCCCCHHHHHHHHHHHHCC--CCCCCEEEEEE
Q ss_conf 959999999588666877899999986288--64200002301
Q gi|254780972|r 1 MIKANVVVKLKKDVLDPQGKALKTALSNIG--FHNINQIRQGK 41 (84)
Q Consensus 1 m~k~~V~V~lK~gVlDPqG~aV~~aL~~lG--~~~v~~vr~GK 41 (84)
|.+=.|..++|+++.+-|-.++.++|..|. ..++.+++.|+
T Consensus 6 Mi~HiVlfklk~~~~~~~~~~~~~~l~~l~~~ip~i~~~~~G~ 48 (106)
T d1tr0a_ 6 LVKHTLLTRFKDEITREQIDNYINDYTNLLDLIPSMKSFNWGT 48 (106)
T ss_dssp CEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 4999999998999999999999999997551298418999974
No 7
>d1mo1a_ d.94.1.1 (A:) Crh, catabolite repression HPr-like protein {Bacillus subtilis [TaxId: 1423]}
Probab=44.68 E-value=11 Score=17.39 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=43.1
Q ss_pred CEEEEEEEEECCCCCC-HHHHHHHHHHHHCCCC-------------CC-----CEEEEEEEEEEEECCCCHHHHHHHHHH
Q ss_conf 9599999995886668-7789999998628864-------------20-----000230189999738998999999999
Q gi|254780972|r 1 MIKANVVVKLKKDVLD-PQGKALKTALSNIGFH-------------NI-----NQIRQGKIFDIEMDETLSDIAEEELES 61 (84)
Q Consensus 1 m~k~~V~V~lK~gVlD-PqG~aV~~aL~~lG~~-------------~v-----~~vr~GK~iei~i~~~~~~~a~~~v~~ 61 (84)
|...++.|..+.|+.- |.+.-++.+- +..-+ ++ -+++.|-.+.+..+++|+++|.+.+..
T Consensus 1 M~~~~v~I~~~~GLHARpAa~lv~~a~-~f~s~i~i~~~~~~~dakSi~~lm~L~~~~G~~i~i~~~G~de~~A~~~l~~ 79 (87)
T d1mo1a_ 1 MVQQKVEVRLKTGLQARPAALFVQEAN-RFTSDVFLEKDGKKVNAKSIMGLMSLAVSTGTEVTLIAQGEDEQEALEKLAA 79 (87)
T ss_dssp CEEEEEECCSCEEECHHHHHHHHHHHT-TSSSEEEEEETTEEEETTCHHHHHHSCCCTTCEEEEEEESTTHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHH-HCCCEEEEEECCEEECCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 947999988999565779999999996-4899899998999983667999972478899999999978889999999999
Q ss_pred HHHHHCCCCCE
Q ss_conf 99984797612
Q gi|254780972|r 62 ICQNLLANPVI 72 (84)
Q Consensus 62 ~c~~lLaNpvI 72 (84)
+ +.+..+
T Consensus 80 ~----~~~~l~ 86 (87)
T d1mo1a_ 80 Y----VQEEVL 86 (87)
T ss_dssp H----HTTCCC
T ss_pred H----HHHHCC
T ss_conf 9----985362
No 8
>d1xrsb2 d.230.4.1 (B:33-84) D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=42.92 E-value=12 Score=17.23 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=27.2
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHH-CCCCCEEE
Q ss_conf 8999973899899999999999984-79761247
Q gi|254780972|r 42 IFDIEMDETLSDIAEEELESICQNL-LANPVIED 74 (84)
Q Consensus 42 ~iei~i~~~~~~~a~~~v~~~c~~l-LaNpvIE~ 74 (84)
+..|++.-...++|++-++.+|.++ |-||.+=.
T Consensus 3 QlSFTLPVp~g~~A~eAAk~la~kMGl~~p~Vv~ 36 (52)
T d1xrsb2 3 QLSFTLPLKNNERSAEAAKQIALKMGLEEPSVVM 36 (52)
T ss_dssp EEEEEESSCSSHHHHHHHHHHHHTTSSCCCEEEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHCCCCHHEEE
T ss_conf 3899840799847899999999982899602304
No 9
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=40.50 E-value=12 Score=17.33 Aligned_cols=39 Identities=15% Similarity=0.207 Sum_probs=31.4
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHC-C-CCCCCEEEEEEE
Q ss_conf 99999958866687789999998628-8-642000023018
Q gi|254780972|r 4 ANVVVKLKKDVLDPQGKALKTALSNI-G-FHNINQIRQGKI 42 (84)
Q Consensus 4 ~~V~V~lK~gVlDPqG~aV~~aL~~l-G-~~~v~~vr~GK~ 42 (84)
=.|..++|+++.+-|-+++.++|..| + ..++..++.|+-
T Consensus 4 HiVlfk~k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~ 44 (103)
T d1q4ra_ 4 HVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKD 44 (103)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEEC
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_conf 99999989999999999999999986630740389885266
No 10
>d1cm3a_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Escherichia coli [TaxId: 562]}
Probab=39.74 E-value=14 Score=16.94 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=44.4
Q ss_pred CEEEEEEEEECCCCCC-HHHHHHHHHHHHCCCC-CC-----------------CEEEEEEEEEEEECCCCHHHHHHHHHH
Q ss_conf 9599999995886668-7789999998628864-20-----------------000230189999738998999999999
Q gi|254780972|r 1 MIKANVVVKLKKDVLD-PQGKALKTALSNIGFH-NI-----------------NQIRQGKIFDIEMDETLSDIAEEELES 61 (84)
Q Consensus 1 m~k~~V~V~lK~gVlD-PqG~aV~~aL~~lG~~-~v-----------------~~vr~GK~iei~i~~~~~~~a~~~v~~ 61 (84)
|+..++.|....|..= |.+.-++.+- ..+-+ .+ -+++.|-.+.+..+++|+++|.+.+..
T Consensus 1 M~~~~v~I~n~~GLHARPAa~lv~~a~-~f~s~i~i~~~~~~~~akSi~~lm~L~~~~G~~i~i~~~G~De~~A~~~l~~ 79 (85)
T d1cm3a_ 1 MFQQEVTITAPNGLDTRPAAQFVKEAK-GFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVK 79 (85)
T ss_dssp CEEEEEECC-CCCSCHHHHHHHHHHHH-TSCSEEEEEETTEEEETTCHHHHTTSCCCTTCEEEEEEESTTHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHH-HCCCEEEEEECCEEEECHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 946999985999652629999999998-5899899999999984381999985599998999999978899999999999
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780972|r 62 ICQN 65 (84)
Q Consensus 62 ~c~~ 65 (84)
+-+.
T Consensus 80 ~~~~ 83 (85)
T d1cm3a_ 80 LMAE 83 (85)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9972
No 11
>d2hpra_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Bacillus subtilis [TaxId: 1423]}
Probab=37.51 E-value=15 Score=16.73 Aligned_cols=29 Identities=21% Similarity=0.176 Sum_probs=24.4
Q ss_pred EEEEEEEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf 00230189999738998999999999999
Q gi|254780972|r 36 QIRQGKIFDIEMDETLSDIAEEELESICQ 64 (84)
Q Consensus 36 ~vr~GK~iei~i~~~~~~~a~~~v~~~c~ 64 (84)
.++.|..++|..+++|+++|.+.+..+-+
T Consensus 53 ~~~~G~~v~i~~~G~De~~A~~~l~~~l~ 81 (87)
T d2hpra_ 53 GIAKGAEITISASGADENDALNALEETMK 81 (87)
T ss_dssp CCCTTCEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCHHHHHHHHHHHHH
T ss_conf 99999999999978689999999999998
No 12
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.75 E-value=19 Score=16.18 Aligned_cols=30 Identities=17% Similarity=0.195 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHCCCCCCCEEEE---EEEEEEEECC
Q ss_conf 7899999986288642000023---0189999738
Q gi|254780972|r 18 QGKALKTALSNIGFHNINQIRQ---GKIFDIEMDE 49 (84)
Q Consensus 18 qG~aV~~aL~~lG~~~v~~vr~---GK~iei~i~~ 49 (84)
=...|+++|.++ ++|.++++ .+...+..+.
T Consensus 17 C~~~Ie~~l~~~--~GV~~v~v~~~~~~v~v~~d~ 49 (72)
T d2aw0a_ 17 CVQSIEGVISKK--PGVKSIRVSLANSNGTVEYDP 49 (72)
T ss_dssp HHHHHHHHHHTS--TTCCCEEEETTTTEEEEEECT
T ss_pred HHHHHHHHHHCC--CCCEEEEEECCCCEEEEEECC
T ss_conf 999999987268--996799998889999999899
No 13
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.67 E-value=19 Score=16.17 Aligned_cols=26 Identities=12% Similarity=0.415 Sum_probs=18.0
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 9999958866687789999998628864
Q gi|254780972|r 5 NVVVKLKKDVLDPQGKALKTALSNIGFH 32 (84)
Q Consensus 5 ~V~V~lK~gVlDPqG~aV~~aL~~lG~~ 32 (84)
++.|.+.++..|++ .|..++..+||+
T Consensus 48 ~v~v~~~~~~~~~~--~i~~~I~~~Gy~ 73 (84)
T d1q8la_ 48 EATIVYQPHLISVE--EMKKQIEAMGFP 73 (84)
T ss_dssp EEEEEECTTTCCHH--HHHHHHHHTTCC
T ss_pred EECEEECCCCCCHH--HHHHHHHHHCCC
T ss_conf 78515446613899--999999970996
No 14
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=31.39 E-value=19 Score=16.14 Aligned_cols=25 Identities=20% Similarity=0.494 Sum_probs=11.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 999958866687789999998628864
Q gi|254780972|r 6 VVVKLKKDVLDPQGKALKTALSNIGFH 32 (84)
Q Consensus 6 V~V~lK~gVlDPqG~aV~~aL~~lG~~ 32 (84)
+.|.+.++..||+ .+.+++.++||+
T Consensus 40 v~v~~d~~~~~~~--~i~~~i~~~Gy~ 64 (68)
T d1cpza_ 40 AVVKFDEANVQAT--EICQAINELGYQ 64 (68)
T ss_dssp EEEEECTTTCCHH--HHHHHHHTTSSC
T ss_pred EEEEECCCCCCHH--HHHHHHHHHCCC
T ss_conf 9999899999999--999999964998
No 15
>d1ptfa_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Enterococcus faecalis [TaxId: 1351]}
Probab=31.06 E-value=19 Score=16.11 Aligned_cols=63 Identities=17% Similarity=0.162 Sum_probs=43.9
Q ss_pred CEEEEEEEEECCCCCC-HHHHHHHHHHHHCCCC--------CC----------CEEEEEEEEEEEECCCCHHHHHHHHHH
Q ss_conf 9599999995886668-7789999998628864--------20----------000230189999738998999999999
Q gi|254780972|r 1 MIKANVVVKLKKDVLD-PQGKALKTALSNIGFH--------NI----------NQIRQGKIFDIEMDETLSDIAEEELES 61 (84)
Q Consensus 1 m~k~~V~V~lK~gVlD-PqG~aV~~aL~~lG~~--------~v----------~~vr~GK~iei~i~~~~~~~a~~~v~~ 61 (84)
|.+.++.|..+.|+.- |.+.-++.+ ++.+-+ .+ -+++.|-.+++..+++|+++|.+.+.+
T Consensus 1 M~~~~~~I~~~~GlHaRpAa~lv~~a-~~~~s~i~i~~~~~~v~akSi~~lm~L~~~~G~~i~i~~~G~de~~Al~~l~~ 79 (87)
T d1ptfa_ 1 MEKKEFHIVAETGIHARPATLLVQTA-SKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVE 79 (87)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHH-TTCSSEEEEEETTEEEETTCHHHHHHHCCCTTCEEEEEEESTTHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHH-HHCCCEEEEEECCEEEECCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH
T ss_conf 96589999389976463999999999-86899799998999982748999984187899999999978789999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780972|r 62 ICQ 64 (84)
Q Consensus 62 ~c~ 64 (84)
+-+
T Consensus 80 ~l~ 82 (87)
T d1ptfa_ 80 TLQ 82 (87)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 16
>d1pcha_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Mycoplasma capricolum [TaxId: 2095]}
Probab=28.88 E-value=21 Score=15.89 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=23.2
Q ss_pred CEEEEEEEEEEEECCCCHHHHHHHHHHHH
Q ss_conf 00023018999973899899999999999
Q gi|254780972|r 35 NQIRQGKIFDIEMDETLSDIAEEELESIC 63 (84)
Q Consensus 35 ~~vr~GK~iei~i~~~~~~~a~~~v~~~c 63 (84)
-+++.|..+++..+++|+++|.+.+.++-
T Consensus 52 L~~~~G~~v~i~~~G~De~~A~~~l~~~l 80 (88)
T d1pcha_ 52 MAIKTGTEITIQADGNDADQAIQAIKQTM 80 (88)
T ss_dssp HCCCTTCEEEEEEESTTHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCHHHHHHHHHHHH
T ss_conf 59999999999997889999999999999
No 17
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=27.45 E-value=22 Score=15.74 Aligned_cols=30 Identities=7% Similarity=0.220 Sum_probs=15.9
Q ss_pred HHHHHHHHHHCCCCCCCEEEE---EEEEEEEECCC
Q ss_conf 899999986288642000023---01899997389
Q gi|254780972|r 19 GKALKTALSNIGFHNINQIRQ---GKIFDIEMDET 50 (84)
Q Consensus 19 G~aV~~aL~~lG~~~v~~vr~---GK~iei~i~~~ 50 (84)
...|+++|.++ ++|.++++ .+...+..+..
T Consensus 21 ~~~Ie~~l~~~--~gV~~v~v~~~~~~~~v~~d~~ 53 (72)
T d1p6ta1 21 AARIEKGLKRM--PGVTDANVNLATETVNVIYDPA 53 (72)
T ss_dssp HHHHHHHHTTS--SSEEEEEEEGGGTEEEEEECTT
T ss_pred HHHHHHHHHCC--CCCEEEEEECCCCEEEEEECCC
T ss_conf 99999999749--9957999986799999998999
No 18
>d1ka5a_ d.94.1.1 (A:) Histidine-containing phosphocarrier protein (HPr) {Staphylococcus aureus [TaxId: 1280]}
Probab=25.10 E-value=24 Score=15.48 Aligned_cols=63 Identities=13% Similarity=0.049 Sum_probs=44.3
Q ss_pred CEEEEEEEEECCCCCC-HHHHHHHHHHHHCCCCC-------C----------CEEEEEEEEEEEECCCCHHHHHHHHHHH
Q ss_conf 9599999995886668-77899999986288642-------0----------0002301899997389989999999999
Q gi|254780972|r 1 MIKANVVVKLKKDVLD-PQGKALKTALSNIGFHN-------I----------NQIRQGKIFDIEMDETLSDIAEEELESI 62 (84)
Q Consensus 1 m~k~~V~V~lK~gVlD-PqG~aV~~aL~~lG~~~-------v----------~~vr~GK~iei~i~~~~~~~a~~~v~~~ 62 (84)
|.+.++.|..+.|+.= |.+.-++.+-+--.--. + -+++.|..+++.++++|+++|.+.+.++
T Consensus 1 M~~~~~tI~n~~GLHARPAa~lv~~a~~f~s~I~i~~~~~~~~akSi~~ll~L~~~~G~~v~i~~~G~de~~Al~~l~~~ 80 (88)
T d1ka5a_ 1 MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDV 80 (88)
T ss_dssp CEEEEEEBCCTTCSCHHHHHHHHHHHHHHSSEEEEEETTEEEETTCHHHHHTTTCCTTCEEEEEEESSSHHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHH
T ss_conf 95689999089987462999999999648998999989999852809999855999999999999788999999999999
Q ss_pred H
Q ss_conf 9
Q gi|254780972|r 63 C 63 (84)
Q Consensus 63 c 63 (84)
-
T Consensus 81 l 81 (88)
T d1ka5a_ 81 L 81 (88)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 19
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=25.03 E-value=24 Score=15.47 Aligned_cols=29 Identities=17% Similarity=0.383 Sum_probs=13.7
Q ss_pred HHHHHHHHHHCCCCCCCEEEEE---EEEEEEECC
Q ss_conf 8999999862886420000230---189999738
Q gi|254780972|r 19 GKALKTALSNIGFHNINQIRQG---KIFDIEMDE 49 (84)
Q Consensus 19 G~aV~~aL~~lG~~~v~~vr~G---K~iei~i~~ 49 (84)
...|+++|..+ ++|.++.+. +...++.+.
T Consensus 17 ~~~Ie~~l~~~--~GV~~v~v~~~~~~v~v~~d~ 48 (69)
T d2qifa1 17 VKAVETSVGEL--DGVSAVHVNLEAGKVDVSFDA 48 (69)
T ss_dssp HHHHHHHHHTS--TTEEEEEEETTTTEEEEEECT
T ss_pred HHHHHHHHHCC--CCCEEEEEECCCCEEEEEECC
T ss_conf 99999998438--995699998879999999899
No 20
>d1o7za_ d.9.1.1 (A:) IP-10/CXCL10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.58 E-value=15 Score=16.74 Aligned_cols=27 Identities=30% Similarity=0.656 Sum_probs=21.5
Q ss_pred EEEEEEEECC-C---CCCHHHHHHHHHHHHC
Q ss_conf 9999999588-6---6687789999998628
Q gi|254780972|r 3 KANVVVKLKK-D---VLDPQGKALKTALSNI 29 (84)
Q Consensus 3 k~~V~V~lK~-g---VlDPqG~aV~~aL~~l 29 (84)
+.+|.+++|. | =|||++.-++.-++.+
T Consensus 30 ~~EVIaTLK~ng~~vCLdP~a~~vkkli~ki 60 (61)
T d1o7za_ 30 RVEIIATMKKKGEKRCLNPESKAIKNLLKAV 60 (61)
T ss_dssp SCEEEEEETTTSCEEEECSSSHHHHHHHHHC
T ss_pred CCEEEEEEECCCCEEECCCCCHHHHHHHHHC
T ss_conf 8478998604991896299977999999862
No 21
>d2dlba1 b.174.1.1 (A:2002-2071) Uncharacterized protein YopT {Bacillus subtilis [TaxId: 1423]}
Probab=21.63 E-value=29 Score=15.08 Aligned_cols=44 Identities=20% Similarity=0.441 Sum_probs=32.4
Q ss_pred CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHC-CC--------CCEEEEEE
Q ss_conf 0000230189999738998999999999999847-97--------61247999
Q gi|254780972|r 34 INQIRQGKIFDIEMDETLSDIAEEELESICQNLL-AN--------PVIEDYDI 77 (84)
Q Consensus 34 v~~vr~GK~iei~i~~~~~~~a~~~v~~~c~~lL-aN--------pvIE~y~i 77 (84)
+.++-..--|.+.-.+++.+-.+..+..+|+.|| +. --+|+|+.
T Consensus 4 lnnialnleivlknkadspevsetlvtricenlllskevsflkadgsvenfkl 56 (70)
T d2dlba1 4 LNNIALNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKL 56 (70)
T ss_dssp EEEEEEEEEEEEEEECSSHHHHHHHHHHHHHTTTTCSEEEEECTTSCEEEEEE
T ss_pred HHCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECEEE
T ss_conf 10000213445514789803779999999998876634320133786212130
No 22
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=21.37 E-value=29 Score=15.05 Aligned_cols=10 Identities=30% Similarity=0.497 Sum_probs=4.6
Q ss_pred HHHHHHHHHC
Q ss_conf 9999998628
Q gi|254780972|r 20 KALKTALSNI 29 (84)
Q Consensus 20 ~aV~~aL~~l 29 (84)
..|+++|.++
T Consensus 19 ~~Ie~~l~~~ 28 (72)
T d1osda_ 19 ITVKKAISKV 28 (72)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHCC
T ss_conf 9999999749
Done!