HHsearch alignment for GI: 254780973 and conserved domain: cd00476
>cd00476 SAICAR_synt 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase. SAICAR synthetase (the PurC gene product) catalyzes the seventh step of the de novo biosynthesis of purine nucleotides (also reported as eighth step). It converts 5-aminoimidazole-4-carboxyribonucleotide (CAIR), ATP, and L-aspartate into 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR), ADP, and phosphate.
Probab=100.00 E-value=0 Score=563.03 Aligned_cols=228 Identities=36% Similarity=0.588 Sum_probs=220.4
Q ss_pred EEEECCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCC
Q ss_conf 63613303768728899799999368245162014556888799999999999998733997405743884002310026
Q gi|254780973|r 6 PVYEEKTKIIYEGLEPGTLIQFFKDDNLLENNPRCATLNGKGVLNNRISEYMFTQLGKIGIPHYFIRRINMREQLVRDVE 85 (255)
Q Consensus 6 ~lyeGKvK~iY~~~d~~~li~~~~DriSAfD~~~~~~I~gKG~~l~~iS~~~F~~l~~~Gi~th~i~~~~~~~~iv~k~~ 85 (255)
T Consensus 1 ~lY~GK~K~vy~~~~-~~ll~~~~DriSafD~~~~~~i~gKG~~~~~iS~~~F~~l~~~GI~tH~i~~~~~~~~~vkk~~ 79 (230)
T cd00476 1 TLYRGKTKIVYETKD-GVLLLEFKDDISAGDGARRNFLDEKGDITAKLTLFIFKYLSEAGIPTHFVERLGPRTLLVDKLK 79 (230)
T ss_pred CCCCCCCEEEEECCC-CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECC
T ss_conf 953023527897699-9899999798514276367889987899999999999986216997356436999479999887
Q ss_pred CCCEEEEEECEEECCHHCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 55359999244601010025-64337737864344434544568864155788885408989997899999999999999
Q gi|254780973|r 86 MIPLLITVRNTAAGSLAKRL-NIPEGLSLPRSLVEFYYLPDSSEKTLVSEEHITAFNWANQSEVEEMTALSIRINDFMTG 164 (255)
Q Consensus 86 ~iPiE~VvR~yaaGS~~kry-~~~~G~~l~~pl~e~~~K~d~~~DP~i~~~~~~~~~~~~~~~~~~i~~~a~~i~~~l~~ 164 (255)
T Consensus 80 ~iplEvVvR~ya~GS~~rry~g~~eg~~l~~Pi~e~~~K~d~~~Dp~i~~~~~~~~~~~~~~e~~~i~~~al~v~~~l~~ 159 (230)
T cd00476 80 XIPLEVVVRNRATGSFVKRYGGFKEGREFPPPLVEFFYKDDAEHDPIVSEDQLERLGFIGKVDVERXKELAVKINTVLKK 159 (230)
T ss_pred EEEEEEEEEEEECCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 64579999711202057661787577618986678773378789998899999985689999999999999999999999
Q ss_pred HHHHCCCEEECCCEEEEECCCCCCCEEEEEEEECCCCCEEEECCCCCCC-CHHHHHCCHHHHHHHHHHHHHHHC
Q ss_conf 9998797663120666310468888799996305874141176756704-478761236779999999999714
Q gi|254780973|r 165 LFLGINIQLVDFRIKCGRLLDDDILRIVLADEIFPDCCRLWDLSKKEEC-DKKRFSKSNDQLLEGYSEVARRLG 237 (255)
Q Consensus 165 ~~~~~Gl~LvD~K~EFG~~~~~~~g~iiL~DEItPDs~R~Wd~~~~e~l-DKd~~R~~l~~v~~~Y~ev~~rl~ 237 (255)
T Consensus 160 ~~~~~Gl~LVD~K~EFG~~~~---G~ivL~DEisPDs~R~Wd~~~~~~~kd~~r~~~~l~~~~~~Y~ev~~rl~ 230 (230)
T cd00476 160 LFSPAGLELWDFKLEFGLDEE---GEIVLGDEISPDSSRLWRKGGEPYDKDLFRRRASLGQIIEKYEEVAELVR 230 (230)
T ss_pred HHHHCCCEEEEEEEEEEECCC---CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 999789989998899878799---98999997089864332289860001034302651769999999999759