HHsearch alignment for GI: 254780974 and conserved domain: TIGR00839
>TIGR00839 aspA aspartate ammonia-lyase; InterPro: IPR004708 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes. Aspartate ammonia-lyase catalyses the conversion of aspartate to fumarate.; GO: 0008797 aspartate ammonia-lyase activity, 0006531 aspartate metabolic process.
Probab=100.00 E-value=0 Score=478.06 Aligned_cols=388 Identities=22% Similarity=0.261 Sum_probs=338.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHCCCHHHHHHHHH----
Q ss_conf 795889999999999999997776899989999999830012--------78989999887463785479999999----
Q gi|254780974|r 14 WSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNA--------VFNVDRIMELDSIIKHDVIAFLTHLA---- 81 (435)
Q Consensus 14 fs~~~~~~~~l~ve~A~a~a~~e~G~ip~~aa~~I~~~~~~~--------~~d~~~~~~~~~~~~~~v~a~~~~l~---- 81 (435)
T Consensus 37 ~~~pefi~~~~~VKKAaaLAN~~l~~i~~~~~~AIv~AcDe~l~~GK~~DQFivD~~QGGAGTS~N--MN~NEViaN~AL 114 (469)
T TIGR00839 37 SDVPEFIRGLAMVKKAAALANVELGLIPEKIAQAIVAACDEILETGKCHDQFIVDVIQGGAGTSVN--MNTNEVIANLAL 114 (469)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHHHH
T ss_conf 360789999999999998755887430889999999999999856871002224433388765422--306789999888
Q ss_pred HHCCHH-HCCCC--------CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 867934-32255--------677707787789999985110246788888899998733320100210123210255422
Q gi|254780974|r 82 EIIGPD-ARFIH--------QGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTT 152 (435)
Q Consensus 82 ~~~g~~-~~~iH--------~G~Ts~Di~~Ta~~l~~r~~l~~l~~~l~~l~~~L~~~a~~~~~~~m~grTh~Q~A~P~T 152 (435)
T Consensus 115 E~mGH~KGeY~~~~PndHVN~sQStNDayPta~~Ia~y~~L~kL~~~~~~l~~~F~~KA~EF~~viKMGRTqLQDAVPmt 194 (469)
T TIGR00839 115 EIMGHKKGEYQFLNPNDHVNRSQSTNDAYPTALRIAVYKSLEKLVDTMEDLRDAFKQKAKEFASVIKMGRTQLQDAVPMT 194 (469)
T ss_pred HHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 76255146621208865102246666644017899999999999999999999998888998888621675454532355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCHHH----HHHHHHHCCCCCCCCCC---CHHHHHHHHH
Q ss_conf 233344554310001488999864310100111-222224664667----88655422578766352---0233333456
Q gi|254780974|r 153 FGLKLAMAYAEFSRSRKRLLTAREEIAVCAISG-SVGTFSNIHPYV----EQHVADAMGLKTDPISS---QVIARDRHAM 224 (435)
Q Consensus 153 ~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lgG-AvGt~~~~~~~~----~~~~a~~LGl~~~~~~~---~~~~rd~~~e 224 (435)
T Consensus 195 lGQEF~ay~~~l~~di~~~~~~~~~l~EvNlGaTAiGTGlN~~~~Y~~lvvK~laevtG~p~V~A~~LieAT~~tgAYv~ 274 (469)
T TIGR00839 195 LGQEFEAYALLLERDIKNIKRTRQLLLEVNLGATAIGTGLNTPPEYIKLVVKKLAEVTGLPLVPAENLIEATQDTGAYVE 274 (469)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEE
T ss_conf 56048999999999999999998778776347510215778771138999887641168864252357775338996266
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 77888776446889999999951---678760002564465420123210241567877521123343100235431143
Q gi|254780974|r 225 YFSVLGVIASSIERVATEIRHLQ---RTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALW 301 (435)
Q Consensus 225 ~~~~l~~~~~~l~kia~Dl~~l~---~~eigei~ep~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~ 301 (435)
T Consensus 275 V~g~LKr~avklSKvcNDLRLlsSGPRAGL~EInLP--~~QpGSSIMPgKVNPV~pEvvNQvcF~VIGND~tv~lA~--E 350 (469)
T TIGR00839 275 VSGALKRIAVKLSKVCNDLRLLSSGPRAGLNEINLP--ELQPGSSIMPGKVNPVVPEVVNQVCFKVIGNDTTVTLAA--E 350 (469)
T ss_pred EHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHCEEECCCHHHHHHH--C
T ss_conf 418899999986457656776405775440005764--447788437877787214325204201005625888861--1
Q ss_pred HCCCCCCCHHHHHCCCCHH----HHHHHHHHHHHHHHHHCEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 1354321015554172045----789999999874231004373579999864458378999999998729998999999
Q gi|254780974|r 302 HERDISHSSVERVIGPDAT----IHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQL 377 (435)
Q Consensus 302 ~erd~~~~~~~~~~l~~~~----~~~~~~l~~~~~ll~~L~vn~erm~~nl~~s~g~i~se~i~~~L~~~Gig~~~Ah~~ 377 (435)
T Consensus 351 -aGQLqLNVmEPVi~~~lf~S~~Il~na~~~l~~kC~~GItaN~~~c~~YV~nSiGiv------T~lNPh-iG----y~~ 418 (469)
T TIGR00839 351 -AGQLQLNVMEPVIGQALFESISILTNAIENLTDKCVEGITANEKICEDYVFNSIGIV------TALNPH-IG----YEN 418 (469)
T ss_pred -CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCE------ECCCCC-CC----CCH
T ss_conf -351012000068999999999999899998886420310676898740100111020------101420-14----223
Q ss_pred HHHHHHHHHHCCCCHHHHHHCCHHHHCCCCHHHHHHHCCHHHHHCC
Q ss_conf 9999999998199989998507432305998999985188988501
Q gi|254780974|r 378 VQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKH 423 (435)
Q Consensus 378 v~~~a~~a~~~~~~l~e~l~~d~~i~~~l~~~eL~~~ldP~~~~g~ 423 (435)
T Consensus 419 ~~~iak~a~~tg~svrd~~Le----~~~LTee~LDdIl~~~nl~~P 460 (469)
T TIGR00839 419 GALIAKEAAKTGKSVRDVVLE----KGLLTEEELDDILSPENLLKP 460 (469)
T ss_pred HHHHHHHHHHCCCCHHHHHHC----CCCCCHHHHHCCCCHHHHCCH
T ss_conf 779999997438833023222----455675541010382651271