HHsearch alignment for GI: 254780974 and conserved domain: TIGR00839

>TIGR00839 aspA aspartate ammonia-lyase; InterPro: IPR004708 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes. Aspartate ammonia-lyase catalyses the conversion of aspartate to fumarate.; GO: 0008797 aspartate ammonia-lyase activity, 0006531 aspartate metabolic process.
Probab=100.00  E-value=0  Score=478.06  Aligned_cols=388  Identities=22%  Similarity=0.261  Sum_probs=338.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHCCCHHHHHHHHH----
Q ss_conf             795889999999999999997776899989999999830012--------78989999887463785479999999----
Q gi|254780974|r   14 WSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNA--------VFNVDRIMELDSIIKHDVIAFLTHLA----   81 (435)
Q Consensus        14 fs~~~~~~~~l~ve~A~a~a~~e~G~ip~~aa~~I~~~~~~~--------~~d~~~~~~~~~~~~~~v~a~~~~l~----   81 (435)
T Consensus        37 ~~~pefi~~~~~VKKAaaLAN~~l~~i~~~~~~AIv~AcDe~l~~GK~~DQFivD~~QGGAGTS~N--MN~NEViaN~AL  114 (469)
T TIGR00839        37 SDVPEFIRGLAMVKKAAALANVELGLIPEKIAQAIVAACDEILETGKCHDQFIVDVIQGGAGTSVN--MNTNEVIANLAL  114 (469)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHHHHH
T ss_conf             360789999999999998755887430889999999999999856871002224433388765422--306789999888


Q ss_pred             HHCCHH-HCCCC--------CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf             867934-32255--------677707787789999985110246788888899998733320100210123210255422
Q gi|254780974|r   82 EIIGPD-ARFIH--------QGMTSSDILDTCFSIQLMRSTDILLEDIDQLLESLKKRAFEYKDTLTIGRSHGIHAEPTT  152 (435)
Q Consensus        82 ~~~g~~-~~~iH--------~G~Ts~Di~~Ta~~l~~r~~l~~l~~~l~~l~~~L~~~a~~~~~~~m~grTh~Q~A~P~T  152 (435)
T Consensus       115 E~mGH~KGeY~~~~PndHVN~sQStNDayPta~~Ia~y~~L~kL~~~~~~l~~~F~~KA~EF~~viKMGRTqLQDAVPmt  194 (469)
T TIGR00839       115 EIMGHKKGEYQFLNPNDHVNRSQSTNDAYPTALRIAVYKSLEKLVDTMEDLRDAFKQKAKEFASVIKMGRTQLQDAVPMT  194 (469)
T ss_pred             HHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             76255146621208865102246666644017899999999999999999999998888998888621675454532355


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCHHH----HHHHHHHCCCCCCCCCC---CHHHHHHHHH
Q ss_conf             233344554310001488999864310100111-222224664667----88655422578766352---0233333456
Q gi|254780974|r  153 FGLKLAMAYAEFSRSRKRLLTAREEIAVCAISG-SVGTFSNIHPYV----EQHVADAMGLKTDPISS---QVIARDRHAM  224 (435)
Q Consensus       153 ~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lgG-AvGt~~~~~~~~----~~~~a~~LGl~~~~~~~---~~~~rd~~~e  224 (435)
T Consensus       195 lGQEF~ay~~~l~~di~~~~~~~~~l~EvNlGaTAiGTGlN~~~~Y~~lvvK~laevtG~p~V~A~~LieAT~~tgAYv~  274 (469)
T TIGR00839       195 LGQEFEAYALLLERDIKNIKRTRQLLLEVNLGATAIGTGLNTPPEYIKLVVKKLAEVTGLPLVPAENLIEATQDTGAYVE  274 (469)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEE
T ss_conf             56048999999999999999998778776347510215778771138999887641168864252357775338996266


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             77888776446889999999951---678760002564465420123210241567877521123343100235431143
Q gi|254780974|r  225 YFSVLGVIASSIERVATEIRHLQ---RTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALW  301 (435)
Q Consensus       225 ~~~~l~~~~~~l~kia~Dl~~l~---~~eigei~ep~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~  301 (435)
T Consensus       275 V~g~LKr~avklSKvcNDLRLlsSGPRAGL~EInLP--~~QpGSSIMPgKVNPV~pEvvNQvcF~VIGND~tv~lA~--E  350 (469)
T TIGR00839       275 VSGALKRIAVKLSKVCNDLRLLSSGPRAGLNEINLP--ELQPGSSIMPGKVNPVVPEVVNQVCFKVIGNDTTVTLAA--E  350 (469)
T ss_pred             EHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHCEEECCCHHHHHHH--C
T ss_conf             418899999986457656776405775440005764--447788437877787214325204201005625888861--1


Q ss_pred             HCCCCCCCHHHHHCCCCHH----HHHHHHHHHHHHHHHHCEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             1354321015554172045----789999999874231004373579999864458378999999998729998999999
Q gi|254780974|r  302 HERDISHSSVERVIGPDAT----IHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRILLALTQAGVSREEAYQL  377 (435)
Q Consensus       302 ~erd~~~~~~~~~~l~~~~----~~~~~~l~~~~~ll~~L~vn~erm~~nl~~s~g~i~se~i~~~L~~~Gig~~~Ah~~  377 (435)
T Consensus       351 -aGQLqLNVmEPVi~~~lf~S~~Il~na~~~l~~kC~~GItaN~~~c~~YV~nSiGiv------T~lNPh-iG----y~~  418 (469)
T TIGR00839       351 -AGQLQLNVMEPVIGQALFESISILTNAIENLTDKCVEGITANEKICEDYVFNSIGIV------TALNPH-IG----YEN  418 (469)
T ss_pred             -CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCCE------ECCCCC-CC----CCH
T ss_conf             -351012000068999999999999899998886420310676898740100111020------101420-14----223


Q ss_pred             HHHHHHHHHHCCCCHHHHHHCCHHHHCCCCHHHHHHHCCHHHHHCC
Q ss_conf             9999999998199989998507432305998999985188988501
Q gi|254780974|r  378 VQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHTKH  423 (435)
Q Consensus       378 v~~~a~~a~~~~~~l~e~l~~d~~i~~~l~~~eL~~~ldP~~~~g~  423 (435)
T Consensus       419 ~~~iak~a~~tg~svrd~~Le----~~~LTee~LDdIl~~~nl~~P  460 (469)
T TIGR00839       419 GALIAKEAAKTGKSVRDVVLE----KGLLTEEELDDILSPENLLKP  460 (469)
T ss_pred             HHHHHHHHHHCCCCHHHHHHC----CCCCCHHHHHCCCCHHHHCCH
T ss_conf             779999997438833023222----455675541010382651271