PSIBLAST alignment of GI: 254780974 and protein with PDB id: 1vdk
>gi|48425891|pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466
>gi|48425892|pdb|1VDK|B Chain B, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466
Score = 119 bits (299), Expect = 6e-25, Method: Composition-based stats.
Identities = 70/428 (16%), Positives = 147/428 (34%), Gaps = 47/428 (10%)
Query: 20 FRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRN-------AVFNVDRIMEL----DSI 68
R + ++ A A +LG +PE+ +K I + F + ++
Sbjct: 46 IRAYGMLKKAAARANLELGELPEEIAKAIIQAAEEVVQGKWDDHFPLVVFQTGSGTQTNM 105
Query: 69 IKHDVIAFLTH------LAEIIGPDARFIHQGMTSSDILDT-CFSIQLMRSTDILLEDID 121
++VIA L +++G +S+D T + + L ++
Sbjct: 106 NVNEVIANRASEILGKPLGSKYAHPNDHVNRGQSSNDTFPTAMYVAVALALHQRLYPAVE 165
Query: 122 QLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVC 181
L+ + +A + + +GR+H + A P T G ++ A+ + + + +
Sbjct: 166 GLIRTFTAKAQAFDQIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNL 225
Query: 182 AISGSVG-TFSNIHPYVEQHVADAMGLKT-------DPISSQVIARDRHAMYFSVLGVIA 233
AI G+ T N HP + VA + +T + + + A D + +A
Sbjct: 226 AIGGTAVGTGLNAHPRFGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLA 285
Query: 234 SSIERVATEIRHLQR---TEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSH 290
++ ++ ++R L I E+ + GSS MP K NP E LT + + +
Sbjct: 286 GALMKIGNDVRWLASGPYAGIGEITIP--ANEPGSSIMPGKVNPTQVEALTMVVVRVYGN 343
Query: 291 VIPAMENVAL-WHERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLE 349
+ + ++ + + D + ++ + + E +++ L+
Sbjct: 344 DHTVAFAGSQGNFQLNVYKPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIEEYLQ 403
Query: 350 QLKGLIHSQRILLALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEK 409
+ + AL +A Y K K L L+E+
Sbjct: 404 KNPM------LATALNKAIG-----YDKAAEIVKKALKEKKTLKQAALE----LGYLTEE 448
Query: 410 EICDKFDY 417
E
Sbjct: 449 EFDRIVVP 456