RPSBLAST alignment of GI: 254780974 and protein with PDBid: 1c3c

 Score =  321 bits (824), Expect = 2e-88
 Identities = 206/432 (47%), Positives = 299/432 (69%), Gaps = 3/432 (0%)

Query: 2   IPRYSRTTMTTLWSLETKFRIWFEIEAHACDALAKLGVIPEKSSKNIWEKGRNAVFNVDR 61
           + RYS + M  LW+ E K+R W E+E     A  +LG+IP+  ++ I      A  +V+ 
Sbjct: 1   VERYSLSPMKDLWTEEAKYRRWLEVELAVTRAYEELGMIPKGVTERIRNN---AKIDVEL 57

Query: 62  IMELDSIIKHDVIAFLTHLAEIIGPDARFIHQGMTSSDILDTCFSIQLMRSTDILLEDID 121
             +++    HDV+AF+  +  +IG D+RF H G+TSSD+LDT  S+ L+ +  ILLE + 
Sbjct: 58  FKKIEEKTNHDVVAFVEGIGSMIGEDSRFFHYGLTSSDVLDTANSLALVEAGKILLESLK 117

Query: 122 QLLESLKKRAFEYKDTLTIGRSHGIHAEPTTFGLKLAMAYAEFSRSRKRLLTAREEIAVC 181
           +  + L + A  YK T TIGR+HG+HAEPT+FGLK+   Y+E  R+ +RL  A EE++  
Sbjct: 118 EFCDVLWEVANRYKHTPTIGRTHGVHAEPTSFGLKVLGWYSEMKRNVQRLERAIEEVSYG 177

Query: 182 AISGSVGTFSNIHPYVEQHVADAMGLKTDPISSQVIARDRHAMYFSVLGVIASSIERVAT 241
            ISG+VG ++N+ P VE+     +GLK +P+S+QV+ RDRHA Y S L ++A+ IER+A 
Sbjct: 178 KISGAVGNYANVPPEVEEKALSYLGLKPEPVSTQVVPRDRHAFYLSTLAIVAAGIERIAV 237

Query: 242 EIRHLQRTEILEVEEFFHPGQKGSSSMPHKRNPILTENLTGLSRLIRSHVIPAMENVALW 301
           EIRHLQRTE+LEVEE F  GQ+GSS+MPHK+NPI  E LTGLSR++R++V P++EN+ALW
Sbjct: 238 EIRHLQRTEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAYVDPSLENIALW 297

Query: 302 HERDISHSSVERVIGPDATIHLDFALNRLKNVIEELVVYPENMKDNLEQLKGLIHSQRIL 361
           HERDISHSSVER + PDAT  L + +    NV+  + V  E MK N++  KGL+ SQR+L
Sbjct: 298 HERDISHSSVERYVFPDATQTLYYMIVTATNVVRNMKVNEERMKKNIDLTKGLVFSQRVL 357

Query: 362 LALTQAGVSREEAYQLVQRNAMKVWKNGAIFLDVLLADVDIRKVLSEKEICDKFDYKYHT 421
           L L + G++R+EAY +VQRNA+K W +   FL+ LL D +++K+++++E+ + FD  Y+ 
Sbjct: 358 LKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYL 417

Query: 422 KHVNAIFERVFQ 433
           KHV+ IFER  +
Sbjct: 418 KHVDHIFERFEK 429