HHsearch alignment for GI: 254780975 and conserved domain: CHL00200
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional.
Probab=99.02 E-value=1.8e-07 Score=68.04 Aligned_cols=190 Identities=16% Similarity=0.227 Sum_probs=136.1
Q ss_pred ECHHHHCC--CHHHHHHHHHHHHHCCCCEEEEEE------ECCEEC---------CCCCC--CHHHHHHHHHCCCCEEEE
Q ss_conf 81706325--889999999999965998999973------426345---------84341--789999864125641685
Q gi|254780975|r 7 IVPSILAA--DFSRLGEEISNITKAGAKQIHFDV------MDGCFV---------PNISF--GADVIRSLRSYSDSVFDC 67 (224)
Q Consensus 7 IspSil~~--d~~~l~~~i~~l~~~~~d~iHiDI------mDg~fv---------pn~~~--~~~~i~~i~~~t~~~~dv 67 (224)
T Consensus 17 li~y~taG~P~~e~s~~~~~~l~~~GaDiiElGiPfSDP~ADGpvIq~A~~~AL~~G~~~~~~~~~v~~~r~~~~~Pivl 96 (263)
T CHL00200 17 LIPFITAGDPDIVITKKALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGINLNKILSILSEVNGEIKAPIVI 96 (263)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf 68887073898789999999999769999997898888666589999999999977987778999999986067998899
Q ss_pred EEEE-EEC------CHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCC-EEEEE
Q ss_conf 6788-512------033676404776079997066421589998677649825998523334478998862014-02899
Q gi|254780975|r 68 HLMI-SSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID-MILIM 139 (224)
Q Consensus 68 HLMv-~~P------~~~i~~~~~~g~d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~D-~vliM 139 (224)
T Consensus 97 --MtY~N~i~~yG~e~F~~~~~~~GvdGlIipDLP~eE~~~~~~~~~~~gl~~I~lvaPtt~~~Ri~~i~~~a~GFiY~v 174 (263)
T CHL00200 97 --FTYYNPVLHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLV 174 (263)
T ss_pred --EEEHHHHHHCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf --862068887388999999998499868747999788899999998558621666478996999999997289808985
Q ss_pred EEECCCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEECCC-CHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf 830677653--322013577899865431386526981589-988999999679989997426637
Q gi|254780975|r 140 TVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFN 202 (224)
Q Consensus 140 ~V~PG~~Gq--~f~~~~l~kI~~l~~~~~~~~~~I~vDGGv-n~~~i~~l~~~Gad~~V~Gsaif~ 202 (224)
T Consensus 175 s-~~GvTG~~~~~~~~l~~~i~~ik~~---t~~Pv~vGFGIs~~e~v~~~~~~~aDGvIVGSaiV~ 236 (263)
T CHL00200 175 S-TTGVTGLKTELDKKLKKLIETIKKM---TNKPIILGFGISTSEQIKQIKGWNINGIVIGSACVQ 236 (263)
T ss_pred E-CCCCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHH
T ss_conf 3-3655687544518799999999973---699848735879999999997459999998789999