HHsearch alignment for GI: 254780975 and conserved domain: CHL00200

>CHL00200 trpA tryptophan synthase alpha subunit; Provisional.
Probab=99.02  E-value=1.8e-07  Score=68.04  Aligned_cols=190  Identities=16%  Similarity=0.227  Sum_probs=136.1

Q ss_pred             ECHHHHCC--CHHHHHHHHHHHHHCCCCEEEEEE------ECCEEC---------CCCCC--CHHHHHHHHHCCCCEEEE
Q ss_conf             81706325--889999999999965998999973------426345---------84341--789999864125641685
Q gi|254780975|r    7 IVPSILAA--DFSRLGEEISNITKAGAKQIHFDV------MDGCFV---------PNISF--GADVIRSLRSYSDSVFDC   67 (224)
Q Consensus         7 IspSil~~--d~~~l~~~i~~l~~~~~d~iHiDI------mDg~fv---------pn~~~--~~~~i~~i~~~t~~~~dv   67 (224)
T Consensus        17 li~y~taG~P~~e~s~~~~~~l~~~GaDiiElGiPfSDP~ADGpvIq~A~~~AL~~G~~~~~~~~~v~~~r~~~~~Pivl   96 (263)
T CHL00200         17 LIPFITAGDPDIVITKKALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGINLNKILSILSEVNGEIKAPIVI   96 (263)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             68887073898789999999999769999997898888666589999999999977987778999999986067998899


Q ss_pred             EEEE-EEC------CHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCC-EEEEE
Q ss_conf             6788-512------033676404776079997066421589998677649825998523334478998862014-02899
Q gi|254780975|r   68 HLMI-SSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID-MILIM  139 (224)
Q Consensus        68 HLMv-~~P------~~~i~~~~~~g~d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~D-~vliM  139 (224)
T Consensus        97 --MtY~N~i~~yG~e~F~~~~~~~GvdGlIipDLP~eE~~~~~~~~~~~gl~~I~lvaPtt~~~Ri~~i~~~a~GFiY~v  174 (263)
T CHL00200         97 --FTYYNPVLHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLV  174 (263)
T ss_pred             --EEEHHHHHHCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf             --862068887388999999998499868747999788899999998558621666478996999999997289808985


Q ss_pred             EEECCCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEECCC-CHHHHHHHHHCCCCEEEECHHHHC
Q ss_conf             830677653--322013577899865431386526981589-988999999679989997426637
Q gi|254780975|r  140 TVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFN  202 (224)
Q Consensus       140 ~V~PG~~Gq--~f~~~~l~kI~~l~~~~~~~~~~I~vDGGv-n~~~i~~l~~~Gad~~V~Gsaif~  202 (224)
T Consensus       175 s-~~GvTG~~~~~~~~l~~~i~~ik~~---t~~Pv~vGFGIs~~e~v~~~~~~~aDGvIVGSaiV~  236 (263)
T CHL00200        175 S-TTGVTGLKTELDKKLKKLIETIKKM---TNKPIILGFGISTSEQIKQIKGWNINGIVIGSACVQ  236 (263)
T ss_pred             E-CCCCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHH
T ss_conf             3-3655687544518799999999973---699848735879999999997459999998789999