HHsearch alignment for GI: 254780975 and conserved domain: COG0159
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism].
Probab=98.57 E-value=3.8e-05 Score=53.18 Aligned_cols=209 Identities=17% Similarity=0.243 Sum_probs=141.9
Q ss_pred EECHHHHCCC--HHHHHHHHHHHHHCCCCEEEEEE------ECCEEC---------CCCCC--CHHHHHHHHH-CCCCEE
Q ss_conf 8817063258--89999999999965998999973------426345---------84341--7899998641-256416
Q gi|254780975|r 6 QIVPSILAAD--FSRLGEEISNITKAGAKQIHFDV------MDGCFV---------PNISF--GADVIRSLRS-YSDSVF 65 (224)
Q Consensus 6 ~IspSil~~d--~~~l~~~i~~l~~~~~d~iHiDI------mDg~fv---------pn~~~--~~~~i~~i~~-~t~~~~ 65 (224)
T Consensus 18 a~i~yit~GdP~~e~s~e~i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g~t~~~~lel~~~~r~~~~~~Pi 97 (265)
T COG0159 18 ALIPYVTAGDPDLETSLEIIKTLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAGVTLEDTLELVEEIRAKGVKVPI 97 (265)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf 74888948899989999999999867988899668888867668899998999997799889999999999861899988
Q ss_pred EEEEEEEEC------CHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHC-CEEEE
Q ss_conf 856788512------03367640477607999706642158999867764982599852333447899886201-40289
Q gi|254780975|r 66 DCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI-DMILI 138 (224)
Q Consensus 66 dvHLMv~~P------~~~i~~~~~~g~d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~-D~vli 138 (224)
T Consensus 98 vl-m~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaPtt~~~rl~~i~~~a~GFiY~ 176 (265)
T COG0159 98 VL-MTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAPTTPDERLKKIAEAASGFIYY 176 (265)
T ss_pred EE-EEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
T ss_conf 99-87011887735999999999759987985789866777899999976986798869999989999999747985899
Q ss_pred EEEEC--CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-HHHHHHHHHCCCCEEEECHHHHCCCCH---HHHHHH
Q ss_conf 98306--776533220135778998654313865269815899-889999996799899974266378998---999999
Q gi|254780975|r 139 MTVNP--GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGE---ISYAKR 212 (224)
Q Consensus 139 M~V~P--G~~Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDGGvn-~~~i~~l~~~Gad~~V~Gsaif~~~d~---~~~~~~ 212 (224)
T Consensus 177 vs~~GvTG~~~~~~-~~~~~~v~~vr~~~---~~Pv~vGFGIs~~e~~~~v~~~-ADGVIVGSAiV~~i~~~~~~~~~~~ 251 (265)
T COG0159 177 VSRMGVTGARNPVS-ADVKELVKRVRKYT---DVPVLVGFGISSPEQAAQVAEA-ADGVIVGSAIVKIIEEGLDEEALEE 251 (265)
T ss_pred EECCCCCCCCCCCC-HHHHHHHHHHHHHC---CCCEEEECCCCCHHHHHHHHHH-CCEEEECHHHHHHHHHCCCHHHHHH
T ss_conf 96666667776530-46999999999744---8973874486999999999976-8857973999999995551446999
Q ss_pred HHHHHHHH
Q ss_conf 99999978
Q gi|254780975|r 213 LNDLKKSA 220 (224)
Q Consensus 213 l~~l~~~a 220 (224)
T Consensus 252 ~~~l~~~l 259 (265)
T COG0159 252 LRALVKEL 259 (265)
T ss_pred HHHHHHHH
T ss_conf 99999999