HHsearch alignment for GI: 254780975 and conserved domain: COG0159

>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism].
Probab=98.57  E-value=3.8e-05  Score=53.18  Aligned_cols=209  Identities=17%  Similarity=0.243  Sum_probs=141.9

Q ss_pred             EECHHHHCCC--HHHHHHHHHHHHHCCCCEEEEEE------ECCEEC---------CCCCC--CHHHHHHHHH-CCCCEE
Q ss_conf             8817063258--89999999999965998999973------426345---------84341--7899998641-256416
Q gi|254780975|r    6 QIVPSILAAD--FSRLGEEISNITKAGAKQIHFDV------MDGCFV---------PNISF--GADVIRSLRS-YSDSVF   65 (224)
Q Consensus         6 ~IspSil~~d--~~~l~~~i~~l~~~~~d~iHiDI------mDg~fv---------pn~~~--~~~~i~~i~~-~t~~~~   65 (224)
T Consensus        18 a~i~yit~GdP~~e~s~e~i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g~t~~~~lel~~~~r~~~~~~Pi   97 (265)
T COG0159          18 ALIPYVTAGDPDLETSLEIIKTLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAGVTLEDTLELVEEIRAKGVKVPI   97 (265)
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf             74888948899989999999999867988899668888867668899998999997799889999999999861899988


Q ss_pred             EEEEEEEEC------CHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHC-CEEEE
Q ss_conf             856788512------03367640477607999706642158999867764982599852333447899886201-40289
Q gi|254780975|r   66 DCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI-DMILI  138 (224)
Q Consensus        66 dvHLMv~~P------~~~i~~~~~~g~d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~-D~vli  138 (224)
T Consensus        98 vl-m~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaPtt~~~rl~~i~~~a~GFiY~  176 (265)
T COG0159          98 VL-MTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAPTTPDERLKKIAEAASGFIYY  176 (265)
T ss_pred             EE-EEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
T ss_conf             99-87011887735999999999759987985789866777899999976986798869999989999999747985899


Q ss_pred             EEEEC--CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-HHHHHHHHHCCCCEEEECHHHHCCCCH---HHHHHH
Q ss_conf             98306--776533220135778998654313865269815899-889999996799899974266378998---999999
Q gi|254780975|r  139 MTVNP--GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGE---ISYAKR  212 (224)
Q Consensus       139 M~V~P--G~~Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDGGvn-~~~i~~l~~~Gad~~V~Gsaif~~~d~---~~~~~~  212 (224)
T Consensus       177 vs~~GvTG~~~~~~-~~~~~~v~~vr~~~---~~Pv~vGFGIs~~e~~~~v~~~-ADGVIVGSAiV~~i~~~~~~~~~~~  251 (265)
T COG0159         177 VSRMGVTGARNPVS-ADVKELVKRVRKYT---DVPVLVGFGISSPEQAAQVAEA-ADGVIVGSAIVKIIEEGLDEEALEE  251 (265)
T ss_pred             EECCCCCCCCCCCC-HHHHHHHHHHHHHC---CCCEEEECCCCCHHHHHHHHHH-CCEEEECHHHHHHHHHCCCHHHHHH
T ss_conf             96666667776530-46999999999744---8973874486999999999976-8857973999999995551446999


Q ss_pred             HHHHHHHH
Q ss_conf             99999978
Q gi|254780975|r  213 LNDLKKSA  220 (224)
Q Consensus       213 l~~l~~~a  220 (224)
T Consensus       252 ~~~l~~~l  259 (265)
T COG0159         252 LRALVKEL  259 (265)
T ss_pred             HHHHHHHH
T ss_conf             99999999