HHsearch alignment for GI: 254780975 and conserved domain: KOG2550
>KOG2550 consensus.
Probab=91.29 E-value=1.3 Score=24.31 Aligned_cols=121 Identities=14% Similarity=0.239 Sum_probs=61.6
Q ss_pred HHHHHCCCCCCEEEEECCCCC--CHHHHHHHHHHCCCEEEE-EEECCCCHHHHHHHHH-HCCEEEEEEEECC--------
Q ss_conf 367640477607999706642--158999867764982599-8523334478998862-0140289983067--------
Q gi|254780975|r 77 HINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGV-AINPETPVAILEDVID-EIDMILIMTVNPG-------- 144 (224)
Q Consensus 77 ~i~~~~~~g~d~i~~H~E~~~--~~~~~i~~i~~~g~k~Gi-ai~p~T~~~~i~~~l~-~~D~vliM~V~PG-------- 144 (224)
T Consensus 255 rl~ll~~aGvdvviLDSSqGnS~~qiemik~iK~~yP~l~ViaGNVVT~-~qa~nLI~aGaDgLrV-GMGsGSiCiTqev 332 (503)
T KOG2550 255 RLDLLVQAGVDVVILDSSQGNSIYQLEMIKYIKETYPDLQIIAGNVVTK-EQAANLIAAGADGLRV-GMGSGSICITQKV 332 (503)
T ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCEEEH-HHHHHHHHCCCCEEEE-CCCCCCEEEECEE
T ss_conf 7888663488689996688850457999999986688863431655338-8899998736760575-2556750545301
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-HHHHHHHHHCCCCEEEECHHHHCC
Q ss_conf -76533220135778998654313865269815899-889999996799899974266378
Q gi|254780975|r 145 -FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQ 203 (224)
Q Consensus 145 -~~Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDGGvn-~~~i~~l~~~Gad~~V~Gsaif~~ 203 (224)
T Consensus 333 ma~GrpQ~TAVy~-va~---~A~q~gvpviADGGi~~~Ghi~KAl~lGAstVMmG~lLAgt 389 (503)
T KOG2550 333 MACGRPQGTAVYK-VAE---FANQFGVPCIADGGIQNVGHVVKALGLGASTVMMGGLLAGT 389 (503)
T ss_pred EECCCCCCCCHHH-HHH---HHHHCCCCEECCCCCCCCHHHHHHHHCCCHHHHCCCHHCCC
T ss_conf 2326776200326-999---99764996550687587317788875385063104110102