HHsearch alignment for GI: 254780975 and conserved domain: PRK02506
>PRK02506 dihydroorotate dehydrogenase 1A; Reviewed.
Probab=96.50 E-value=0.08 Score=31.98 Aligned_cols=198 Identities=13% Similarity=0.189 Sum_probs=115.7
Q ss_pred EEECHHHHCCCHHHHHHHHHHHHHCCCCEEEEEE-----E-----------CCEECCCCCCC---HH----HHHHH-HHC
Q ss_conf 1881706325889999999999965998999973-----4-----------26345843417---89----99986-412
Q gi|254780975|r 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDV-----M-----------DGCFVPNISFG---AD----VIRSL-RSY 60 (224)
Q Consensus 5 ~~IspSil~~d~~~l~~~i~~l~~~~~d~iHiDI-----m-----------Dg~fvpn~~~~---~~----~i~~i-~~~ 60 (224)
T Consensus 15 i~lAaG~~~~~~e----~~~~~~~~G~G~v~~kTit~~pq~GNp~PR~~r~~~~~iN~~G~~n~G~~~~~~~l~~~~~~~ 90 (308)
T PRK02506 15 LMNAAGVYCMTKE----ELEEVEASQAGSFVTKTATLEVRPGNPEPRYADTPLGSINSMGLPNNGFDYYLDYVLDLQKTG 90 (308)
T ss_pred CEECCCCCCCCHH----HHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 8878678998999----999999769738995423545766999986997675301215478563899999889999627
Q ss_pred CCCEEEEEEEEEECCHHH---HHHCCCC-CCEEEEECCC--C-------CC---HHHHHHHHHHCCCEE-EEEEECCCCH
Q ss_conf 564168567885120336---7640477-6079997066--4-------21---589998677649825-9985233344
Q gi|254780975|r 61 SDSVFDCHLMISSIDSHI---NIIADAG-CDIITFHPES--S-------PH---IRRSLRTIHAMGKKT-GVAINPETPV 123 (224)
Q Consensus 61 t~~~~dvHLMv~~P~~~i---~~~~~~g-~d~i~~H~E~--~-------~~---~~~~i~~i~~~g~k~-Giai~p~T~~ 123 (224)
T Consensus 91 ~~~~vi~si~g~~~~e~~~~~~~~~~~~~~~~ielNiScPNt~g~~~~~~d~~~~~~il~~v~~~~~~Pi~vKlsP~~~~ 170 (308)
T PRK02506 91 PHKPHFLSVVGLSPEETHTILKKIQASDFEGLVELNLSCPNVPGKPQIAYDFETTDQILTEVFTYFTKPLGVKLPPYFDI 170 (308)
T ss_pred CCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 99975888850775377888999875475425546333788510555522899999999999987503334558987776
Q ss_pred HHHHHHHHHC-----CEEEE-------EEE-------EC-----CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC-
Q ss_conf 7899886201-----40289-------983-------06-----77653322013577899865431386526981589-
Q gi|254780975|r 124 AILEDVIDEI-----DMILI-------MTV-------NP-----GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV- 178 (224)
Q Consensus 124 ~~i~~~l~~~-----D~vli-------M~V-------~P-----G~~Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDGGv- 178 (224)
T Consensus 171 ~~~~~~a~~~~~~~~~~i~~~nt~~~~~~i~~~~~~~~~~~~~GGlSG~~l~~~al~~v~~~~~~~~-~~i~IIg~GGI~ 249 (308)
T PRK02506 171 VHFDQAAAIFNKYPLAFVNCVNSIGNGLVIEDESVVIKPKNGFGGIGGDYIKPTALANVHAFYQRLK-PSIQIIGTGGVK 249 (308)
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC-CCCCEEEECCCC
T ss_conf 7699999985615653798870235662013775101567887887761133799999999999838-996389866707
Q ss_pred CHHHHHHHHHCCCCEEEECHHH-HCCCCHH
Q ss_conf 9889999996799899974266-3789989
Q gi|254780975|r 179 TSRNIKSLVQAGADLLVVGSSF-FNQKGEI 207 (224)
Q Consensus 179 n~~~i~~l~~~Gad~~V~Gsai-f~~~d~~ 207 (224)
T Consensus 250 s~~Da~e~i~aGAs~VQv~Tal~~~Gp~~~ 279 (308)
T PRK02506 250 TGRDAFEHILCGASMVQVGTALHKEGPAIF 279 (308)
T ss_pred CHHHHHHHHHCCCCCEEEEEEEEEECCHHH
T ss_conf 899999999819872068422204594799