HHsearch alignment for GI: 254780975 and conserved domain: PRK13111
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional.
Probab=99.00 E-value=7.1e-07 Score=64.25 Aligned_cols=203 Identities=18% Similarity=0.273 Sum_probs=142.8
Q ss_pred ECHHHHCC--CHHHHHHHHHHHHHCCCCEEEEEE------ECCEEC---------CCCCC--CHHHHHHHHHCCCCEEEE
Q ss_conf 81706325--889999999999965998999973------426345---------84341--789999864125641685
Q gi|254780975|r 7 IVPSILAA--DFSRLGEEISNITKAGAKQIHFDV------MDGCFV---------PNISF--GADVIRSLRSYSDSVFDC 67 (224)
Q Consensus 7 IspSil~~--d~~~l~~~i~~l~~~~~d~iHiDI------mDg~fv---------pn~~~--~~~~i~~i~~~t~~~~dv 67 (224)
T Consensus 11 li~y~taG~P~~e~~~~~~~~l~~~Gad~iEiGiPfSDP~aDGpvIq~a~~~AL~~G~~~~~~f~~~~~~r~~~~~pivl 90 (256)
T PRK13111 11 LIPYITAGDPDLETSLEILKALVEAGADIIELGIPFSDPVADGPVIQRASLRALAAGVTLADVLELLREIRAKPTIPIVL 90 (256)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 89887070899899999999999659999997888788766579999999999977996999999999986068998899
Q ss_pred EEEEE-E------CCHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCC-EEEEE
Q ss_conf 67885-1------2033676404776079997066421589998677649825998523334478998862014-02899
Q gi|254780975|r 68 HLMIS-S------IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID-MILIM 139 (224)
Q Consensus 68 HLMv~-~------P~~~i~~~~~~g~d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~~~D-~vliM 139 (224)
T Consensus 91 --M~Y~N~i~~~G~e~F~~~~~~~GvdGvIipDLP~eE~~~~~~~~~~~gi~~I~lvaPtt~~~Ri~~i~~~s~gfiY~v 168 (256)
T PRK13111 91 --MTYYNPIFQYGVEAFAADAAEAGVDGLIIPDLPPEEAEEFRAAAKKHGIDLIFLVAPTTTDERLKKIASHASGFVYYV 168 (256)
T ss_pred --EEECCHHHHHCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEE
T ss_conf --850308987099999999997599779816999788899999999759808999699998899999996269859998
Q ss_pred EEECCCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEECCC-CHHHHHHHHHCCCCEEEECHHHHC---CCCHHHHHHHH
Q ss_conf 830677653--322013577899865431386526981589-988999999679989997426637---89989999999
Q gi|254780975|r 140 TVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFN---QKGEISYAKRL 213 (224)
Q Consensus 140 ~V~PG~~Gq--~f~~~~l~kI~~l~~~~~~~~~~I~vDGGv-n~~~i~~l~~~Gad~~V~Gsaif~---~~d~~~~~~~l 213 (224)
T Consensus 169 s-~~GvTG~~~~~~~~~~~~i~~ik~~---t~~Pi~vGFGIs~~e~v~~~~~-~aDGvIVGSaiv~~i~~~~~~~~~~~v 243 (256)
T PRK13111 169 S-RAGVTGARSADAADVADLLARLKAH---TDLPVAVGFGISTPEQAAAIAE-GADGVIVGSALVKIIEAADPEEALAAL 243 (256)
T ss_pred E-CCCCCCCCCCCHHHHHHHHHHHHHC---CCCCEEEECCCCCHHHHHHHHC-CCCEEEECHHHHHHHHHCCHHHHHHHH
T ss_conf 5-6776788766628899999999870---6897588528899999999974-599999868999999843977789999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780975|r 214 NDL 216 (224)
Q Consensus 214 ~~l 216 (224)
T Consensus 244 ~~f 246 (256)
T PRK13111 244 AEF 246 (256)
T ss_pred HHH
T ss_conf 999