HHsearch alignment for GI: 254780975 and conserved domain: TIGR03572

>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=98.60  E-value=1.4e-05  Score=55.97  Aligned_cols=176  Identities=15%  Similarity=0.084  Sum_probs=119.2

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCCCCEEEEEC
Q ss_conf             58899999999999659989999734263458434178999986412564168567885120336764047760799970
Q gi|254780975|r   14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP   93 (224)
Q Consensus        14 ~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g~d~i~~H~   93 (224)
T Consensus        30 gdP~~---~ak~~~~~g~d~lhivDld~a~~-~~~~n~~~I~~i~~~~~ipi~vGGGIrs-~e~~~~ll~~GadkViigs  104 (232)
T TIGR03572        30 GDPVN---AARIYNAKGADELIVLDIDASKR-GREPLFELISNLAEECFMPLTVGGGIRS-LEDAKKLLSLGADKVSINT  104 (232)
T ss_pred             CCHHH---HHHHHHHCCCCEEEEEECCCCCC-CCCCHHHHHHHHHHHCCCCEEEEECEEE-HHHHHHHHHCCCCEEEECH
T ss_conf             89999---99999986999999996876434-8821799999999972985899713303-8999999976996899345


Q ss_pred             CCCCCHHHHHHHHHHCCCE-EEEEEEC---------------C---CC--H-HHHHHHHH-HCCEEEEEEEECCCCCCCC
Q ss_conf             6642158999867764982-5998523---------------3---34--4-78998862-0140289983067765332
Q gi|254780975|r   94 ESSPHIRRSLRTIHAMGKK-TGVAINP---------------E---TP--V-AILEDVID-EIDMILIMTVNPGFGGQQL  150 (224)
Q Consensus        94 E~~~~~~~~i~~i~~~g~k-~Giai~p---------------~---T~--~-~~i~~~l~-~~D~vliM~V~PG~~Gq~f  150 (224)
T Consensus       105 ~a~~~p~~~~~~~~~~G~q~ivvsiD~k~~~~~~~~~v~~~g~~~~~~~~~~~~i~~~~~~g~geii~tdI~~DG~~~G~  184 (232)
T TIGR03572       105 AALENPDLIEEAARRFGSQCVVVSIDVKKELDGSDYKVYSDNGRRATGRDPVEWAREAEQLGAGEILLNSIDRDGTMKGY  184 (232)
T ss_pred             HHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
T ss_conf             45219357789999869945899999841677872799966776357987999999987359989999888576856768


Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEECCCC-HHHHHHHH-HCCCCEEEECHHH
Q ss_conf             20135778998654313865269815899-88999999-6799899974266
Q gi|254780975|r  151 IESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLV-QAGADLLVVGSSF  200 (224)
Q Consensus       151 ~~~~l~kI~~l~~~~~~~~~~I~vDGGvn-~~~i~~l~-~~Gad~~V~Gsai  200 (224)
T Consensus       185 d~~l~~~i~---~---~~~~piiasGGi~~~~di~~l~~~~~~~gv~~gs~f  230 (232)
T TIGR03572       185 DLELIKTVS---D---AVSIPVIALGGAGSLDDLVEVALEAGASAVAAASLF  230 (232)
T ss_pred             CHHHHHHHH---H---HCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEEECC
T ss_conf             999999999---8---689999998898999999999985898199972114