HHsearch alignment for GI: 254780975 and conserved domain: cd00564
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.
Probab=98.78 E-value=6.6e-07 Score=64.46 Aligned_cols=190 Identities=19% Similarity=0.155 Sum_probs=119.7
Q ss_pred ECHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCCC
Q ss_conf 81706325889999999999965998999973426345843417899998641256416856788512033676404776
Q gi|254780975|r 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGC 86 (224)
Q Consensus 7 IspSil~~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g~ 86 (224)
T Consensus 4 IT~~~~~--~~~~~~~l~~~l~~gv~~iqlR~k~~~~~~----~~~~a~~~~~~~~-~~~~~liInd~~~lA---~~~~~ 73 (196)
T cd00564 4 ITDRRLD--GEDLLEVVEAALKGGVTLVQLREKDLSARE----LLELARALRELCR-KYGVPLIINDRVDLA---LAVGA 73 (196)
T ss_pred ECCCCCC--CCHHHHHHHHHHHCCCCEEEECCCCCCHHH----HHHHHHHHHHHHH-HHCCEEEECCHHHHH---HHHCC
T ss_conf 8898646--514999999999859999998679989999----9999999999999-809979978869999---97399
Q ss_pred CEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH-HCCEEEEEEEECCCCCCCC-CCHHHHHHHHHHHH
Q ss_conf 079997066421589998677649825998523334478998862-0140289983067765332-20135778998654
Q gi|254780975|r 87 DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQL-IESTIPKIRQAKAL 164 (224)
Q Consensus 87 d~i~~H~E~~~~~~~~i~~i~~~g~k~Giai~p~T~~~~i~~~l~-~~D~vliM~V~PG~~Gq~f-~~~~l~kI~~l~~~ 164 (224)
T Consensus 74 d--GvHl~~~d~~~~~~r~~~~~~~iiG~S~h--~-~~e~~~a~~~g~DYi~~gpvf~T~tK~~~~~~~g~~~l~~~~~~ 148 (196)
T cd00564 74 D--GVHLGQDDLPVAEARALLGPDLIIGVSTH--S-LEEALRAEELGADYVGFGPVFPTPTKPGAGPPLGLELLREIAEL 148 (196)
T ss_pred C--EEECCCCCCCHHHHHHHHCCCCEEEECCC--C-HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 8--79558466899999987288975882478--8-99999988709993886465578988887787788999999986
Q ss_pred HHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHH
Q ss_conf 31386526981589988999999679989997426637899899999999
Q gi|254780975|r 165 IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214 (224)
Q Consensus 165 ~~~~~~~I~vDGGvn~~~i~~l~~~Gad~~V~Gsaif~~~d~~~~~~~l~ 214 (224)
T Consensus 149 ---~~~Pv~AiGGI~~~ni~~~~~~G~~giAv~s~i~~~~dp~~~~~~l~ 195 (196)
T cd00564 149 ---VEIPVVAIGGITPENAAEVLAAGADGVAVISAITGADDPAAAARELL 195 (196)
T ss_pred ---CCCCEEEECCCCHHHHHHHHHCCCCEEEEHHHHHCCCCHHHHHHHHH
T ss_conf ---79998998589999999999809999997299777999999999972