HHsearch alignment for GI: 254780975 and conserved domain: cd04723

>cd04723 HisA_HisF Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF). The ProFAR isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene. The Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and pl
Probab=98.80  E-value=2.5e-06  Score=60.70  Aligned_cols=182  Identities=14%  Similarity=0.155  Sum_probs=129.7

Q ss_pred             HHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCCCCEE
Q ss_conf             06325889999999999965998999973426345843417899998641256416856788512033676404776079
Q gi|254780975|r   10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDII   89 (224)
Q Consensus        10 Sil~~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g~d~i   89 (224)
T Consensus        31 ~~~~~dP~~~a~~~---~~~ga~~lhivDLda~~--g~~~n~~~I~~i~~~~~~pi~vGGGIrs-~~~~~~~l~~Gadkv  104 (233)
T cd04723          31 LCSTSDPLDVARAY---KELGFRGLYIADLDAIM--GRGDNDEAIRELAAAWPLGLWVDGGIRS-LENAQEWLKRGASRV  104 (233)
T ss_pred             CCCCCCHHHHHHHH---HHCCCCEEEEEECCCCC--CCCCHHHHHHHHHHHCCCCEEEECCCCC-HHHHHHHHHCCCCEE
T ss_conf             30587999999999---98798989999786546--9975399999999878998899702276-999999986072015


Q ss_pred             EEECCCCCCHHHHHHHHHHCCC-EEEEEEEC-----------CCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHH
Q ss_conf             9970664215899986776498-25998523-----------33447899886201402899830677653322013577
Q gi|254780975|r   90 TFHPESSPHIRRSLRTIHAMGK-KTGVAINP-----------ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK  157 (224)
Q Consensus        90 ~~H~E~~~~~~~~i~~i~~~g~-k~Giai~p-----------~T~~~~i~~~l~~~D~vliM~V~PG~~Gq~f~~~~l~k  157 (224)
T Consensus       105 vigs~~~~~-~~~~~~~~~~g~~~ivvslD~k~~~~~~~~~~~~~~~~~~~~~~~~~eii~t~Id~dGt~~G~d~~l~~~  183 (233)
T cd04723         105 IVGTETLPS-DDDEDRLAALGEQRLVLSLDFRGGQLLKPTDFIGPEELLRRLAKWPEELIVLDIDRVGSGQGPDLELLER  183 (233)
T ss_pred             ECCCHHCCC-HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH
T ss_conf             245100499-8999999997899989999998997872464348999999999658959998643446567779999999


Q ss_pred             HHHHHHHHHCCCCEEEEECCC-CHHHHHHHHHCCCCEEEECHHHHCCC
Q ss_conf             899865431386526981589-98899999967998999742663789
Q gi|254780975|r  158 IRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQK  204 (224)
Q Consensus       158 I~~l~~~~~~~~~~I~vDGGv-n~~~i~~l~~~Gad~~V~Gsaif~~~  204 (224)
T Consensus       184 i~~---~---~~~pvi~sGGv~s~~di~~l~~~g~~gvivg~alh~g~  225 (233)
T cd04723         184 LAA---R---ADIPVIAAGGVRSVEDLELLKKLGASGALVASALHDGG  225 (233)
T ss_pred             HHH---H---CCCCEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCCC
T ss_conf             998---6---89989998899999999999978998999863977899