HHsearch alignment for GI: 254780975 and conserved domain: cd04728
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=92.33 E-value=0.97 Score=25.04 Aligned_cols=185 Identities=16% Similarity=0.247 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEE-----CCH---HHHHHCCC-CCCE
Q ss_conf 99999999996599899997342634584341789999864125641685678851-----203---36764047-7607
Q gi|254780975|r 18 RLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS-----IDS---HINIIADA-GCDI 88 (224)
Q Consensus 18 ~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~-----P~~---~i~~~~~~-g~d~ 88 (224)
T Consensus 21 s~~~~~~ai~aSgaeivTVAlRR~~~~~--~~~~~~l~~i~~-----~~~~~LPNTAGc~ta~EAvr~A~laRE~~~t~~ 93 (248)
T cd04728 21 SPAIMKEAIEASGAEIVTVALRRVNIGD--PGGESFLDLLDK-----SGYTLLPNTAGCRTAEEAVRTARLAREALGTDW 93 (248)
T ss_pred CHHHHHHHHHHHCCCEEEEEEEECCCCC--CCCHHHHHHHHH-----CCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf 9999999999968976999986305788--885268987523-----386687654011679999999999999848986
Q ss_pred EEEECCC-----CCCHHHHHHHHHHCCCEEEEEEECCCCHH-HHHHHHHHCCEEEEEEE-ECCCCCCCCC-CHHHHHHHH
Q ss_conf 9997066-----42158999867764982599852333447-89988620140289983-0677653322-013577899
Q gi|254780975|r 89 ITFHPES-----SPHIRRSLRTIHAMGKKTGVAINPETPVA-ILEDVIDEIDMILIMTV-NPGFGGQQLI-ESTIPKIRQ 160 (224)
Q Consensus 89 i~~H~E~-----~~~~~~~i~~i~~~g~k~Giai~p~T~~~-~i~~~l~~~D~vliM~V-~PG~~Gq~f~-~~~l~kI~~ 160 (224)
T Consensus 94 IKLEVi~D~~~LlPD~~eTl~Aae~L-v~~GF~VlpY~~~D~v~akrLe~~Gc~avMPlgsPIGSg~Gl~n~~~l~~i~- 171 (248)
T cd04728 94 IKLEVIGDDKTLLPDPIETLKAAEIL-VKEGFTVLPYCTDDPVLAKRLEDAGCAAVMPLGSPIGSGQGLLNPYNLRIII- 171 (248)
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHH-
T ss_conf 99998179767798868999999999-9889989786788999999999749534520456434798879999999999-
Q ss_pred HHHHHHCCCCEEEEECCCC-HHHHHHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHH
Q ss_conf 8654313865269815899-8899999967998999742663789989999999999
Q gi|254780975|r 161 AKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216 (224)
Q Consensus 161 l~~~~~~~~~~I~vDGGvn-~~~i~~l~~~Gad~~V~Gsaif~~~d~~~~~~~l~~l 216 (224)
T Consensus 172 --e---~~~vPvIVDAGiG~pS~Aa~aMElG~daVL~NTAIA~A~dPv~MA~A~~~A 223 (248)
T cd04728 172 --E---RADVPVIVDAGIGTPSDAAQAMELGADAVLLNTAIAKAKDPVAMARAFKLA 223 (248)
T ss_pred --H---HCCCCEEEECCCCCHHHHHHHHHCCCCEEEHHHHHHCCCCHHHHHHHHHHH
T ss_conf --8---479988984799975678999872655334546877169989999999999