HHsearch alignment for GI: 254780975 and conserved domain: cd04731
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=98.85 E-value=3e-06 Score=60.26 Aligned_cols=185 Identities=16% Similarity=0.150 Sum_probs=123.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHCCCCCCEEEEE
Q ss_conf 25889999999999965998999973426345843417899998641256416856788512033676404776079997
Q gi|254780975|r 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFH 92 (224)
Q Consensus 13 ~~d~~~l~~~i~~l~~~~~d~iHiDImDg~fvpn~~~~~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g~d~i~~H 92 (224)
T Consensus 26 ~gdP~~~---a~~~~~~gadelhivDld~a~-~g~~~n~~~i~~i~~~~~~pi~vGGGIrs-~~~~~~~l~~GadkVvig 100 (243)
T cd04731 26 AGDPVEL---AKRYNEQGADELVFLDITASS-EGRETMLDVVERVAEEVFIPLTVGGGIRS-LEDARRLLRAGADKVSIN 100 (243)
T ss_pred CCCHHHH---HHHHHHCCCCEEEEECCCCCC-CCCCCHHHHHHHHHHHCCCCEEEEEEEEE-HHHHHHHHHCCCCEEEEC
T ss_conf 8899999---999998699999997067320-37700799999999867986899850664-799999997799789989
Q ss_pred CCCCCCHHHHHHHHHHCCCE-EEEEEECC--------------------CCHHHHHHHHHH-CCEEEEEEEECCCCCCCC
Q ss_conf 06642158999867764982-59985233--------------------344789988620-140289983067765332
Q gi|254780975|r 93 PESSPHIRRSLRTIHAMGKK-TGVAINPE--------------------TPVAILEDVIDE-IDMILIMTVNPGFGGQQL 150 (224)
Q Consensus 93 ~E~~~~~~~~i~~i~~~g~k-~Giai~p~--------------------T~~~~i~~~l~~-~D~vliM~V~PG~~Gq~f 150 (224)
T Consensus 101 s~~~~n~~~~~~~~~~~Gsq~Iv~siD~k~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~G~geil~tdI~~DGt~~G~ 180 (243)
T cd04731 101 SAAVENPELIREIAKRFGSQCVVVSIDAKRRGDGGYEVYTHGGRKPTGLDAVEWAKEVEELGAGEILLTSMDRDGTKKGY 180 (243)
T ss_pred CCCCCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
T ss_conf 84423771435788756993099999976537896289846984412678999999998469878999872576856657
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCC-CHHHHHH-HHHCCCCEEEECHHHHCCCCHHH
Q ss_conf 2013577899865431386526981589-9889999-99679989997426637899899
Q gi|254780975|r 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKS-LVQAGADLLVVGSSFFNQKGEIS 208 (224)
Q Consensus 151 ~~~~l~kI~~l~~~~~~~~~~I~vDGGv-n~~~i~~-l~~~Gad~~V~Gsaif~~~d~~~ 208 (224)
T Consensus 181 d~~l~~~i~~------~~~~piI~sGGi~~~~di~~~l~~~~~~gv~~g~~~~~~~~~l~ 234 (243)
T cd04731 181 DLELIRAVSS------AVNIPVIASGGAGKPEHFVEAFEEGGADAALAASIFHFGEYTIA 234 (243)
T ss_pred CHHHHHHHHH------HCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCHH
T ss_conf 9999999998------68999999889999999999998789829988227676998999