HHsearch alignment for GI: 254780975 and conserved domain: pfam03437
>pfam03437 BtpA BtpA family. The BtpA protein is tightly associated with the thylakoid membranes, where it stabilizes the reaction centre proteins of photosystem I.
Probab=96.11 E-value=0.13 Score=30.64 Aligned_cols=173 Identities=14% Similarity=0.259 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEE-CCEECCCCCCCHHHH-------HHHHHCCCCEEEEEEEEEECCHHHHHHCCCCCCE
Q ss_conf 99999999999659989999734-263458434178999-------9864125641685678851203367640477607
Q gi|254780975|r 17 SRLGEEISNITKAGAKQIHFDVM-DGCFVPNISFGADVI-------RSLRSYSDSVFDCHLMISSIDSHINIIADAGCDI 88 (224)
Q Consensus 17 ~~l~~~i~~l~~~~~d~iHiDIm-Dg~fvpn~~~~~~~i-------~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~g~d~ 88 (224)
T Consensus 29 e~A~~ea~~l~~~GvDgvivEN~~D~Py~~--~~~~etvaamt~i~~~v~~~~~iP~GvnvL~nd~~aalaiA~a~ga~F 106 (254)
T pfam03437 29 DKAVSDAMALEEGGFDAVILENYGDAPYLK--TVGPETVAAMTVIAGEVKSDVSIPLGINVLRNDAVAALAIAYAVGADF 106 (254)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCC--CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCE
T ss_conf 999999999997799889980689977746--776698999999999998744887367776178589999999829976
Q ss_pred EEE--ECCC--------CCCHHHHHHHHHHCCCEEEEE--EEC--C-----CCHHH-HHHHHHH--CCEEEEEEEECCCC
Q ss_conf 999--7066--------421589998677649825998--523--3-----34478-9988620--14028998306776
Q gi|254780975|r 89 ITF--HPES--------SPHIRRSLRTIHAMGKKTGVA--INP--E-----TPVAI-LEDVIDE--IDMILIMTVNPGFG 146 (224)
Q Consensus 89 i~~--H~E~--------~~~~~~~i~~i~~~g~k~Gia--i~p--~-----T~~~~-i~~~l~~--~D~vliM~V~PG~~ 146 (224)
T Consensus 107 IRv~~~~g~~~~d~G~~~~~a~~~~r~R~~l~a~v~i~aDV~~Kh~~~l~~~~~~~~~~~~~~~~~aDaiivTG---~~T 183 (254)
T pfam03437 107 IRVNVLTGVAASDQGILEGNAGELARYRKLLPSRIKILADVHVKHAVHLGNRDIESAVLDTIERGLADAVILSG---KTT 183 (254)
T ss_pred EEECCEECEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECC---CCC
T ss_conf 98713765333577531553899999999719995899755001254579999899999999826898999787---302
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEECHHHH
Q ss_conf 5332201357789986543138652698158998899999967998999742663
Q gi|254780975|r 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201 (224)
Q Consensus 147 Gq~f~~~~l~kI~~l~~~~~~~~~~I~vDGGvn~~~i~~l~~~Gad~~V~Gsaif 201 (224)
T Consensus 184 G~~~~---~~~l~~vk~~~---~~PvlvGSGvt~~Ni~~~l~~-ADG~IVGS~~K 231 (254)
T pfam03437 184 GGEVD---LEELKLAKETV---PVPVLVGSGVNLENLEELWSI-ADGFIVGTSIK 231 (254)
T ss_pred CCCCC---HHHHHHHHHHC---CCCEEEECCCCHHHHHHHHHH-CCEEEEEHHEE
T ss_conf 79999---99999999626---998899579898899999987-89999842230