BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780975|ref|YP_003065388.1| D-ribulose-5 phosphate
3-epimerase protein [Candidatus Liberibacter asiaticus str. psy62]
(224 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780975|ref|YP_003065388.1| D-ribulose-5 phosphate 3-epimerase protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040652|gb|ACT57448.1| D-ribulose-5 phosphate 3-epimerase protein [Candidatus Liberibacter
asiaticus str. psy62]
Length = 224
Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/224 (100%), Positives = 224/224 (100%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY
Sbjct: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE
Sbjct: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS
Sbjct: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID
Sbjct: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
>gi|315122607|ref|YP_004063096.1| D-ribulose-5 phosphate 3-epimerase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496009|gb|ADR52608.1| D-ribulose-5 phosphate 3-epimerase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 225
Score = 365 bits (936), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 175/224 (78%), Positives = 200/224 (89%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M SIQIVPSILAADFSRLGEE+S+ITKAGAKQIHFDVMDG FVPNISFGADVI+SLRSY
Sbjct: 1 MPLSIQIVPSILAADFSRLGEEVSDITKAGAKQIHFDVMDGHFVPNISFGADVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD++FDCHLMISS+DSHI + ADAGCDIIT H E SPHIR+SLRTI AMGKK+G+A+NPE
Sbjct: 61 SDAIFDCHLMISSVDSHIKVFADAGCDIITLHAEFSPHIRQSLRTIRAMGKKSGIALNPE 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV++LE+VIDEIDMILIMTVNPGFGGQQLI T+PKIRQA+ LIGKR I+LEVDGG+ S
Sbjct: 121 TPVSVLENVIDEIDMILIMTVNPGFGGQQLINFTVPKIRQARELIGKRPIALEVDGGIKS 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+SL Q GA+L V GS+ FN+K + SY +RLN+LKKSAL ID
Sbjct: 181 GNIRSLAQEGANLFVAGSAIFNKKEKESYKQRLNELKKSALKID 224
>gi|190891970|ref|YP_001978512.1| D-ribulose-5 phosphate 3-epimerase [Rhizobium etli CIAT 652]
gi|190697249|gb|ACE91334.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli CIAT
652]
Length = 225
Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMIS +D ++ A AGCD IT H ES PH+ RSL+T+ +GKK GV +NP
Sbjct: 61 TDATFDCHLMISPVDDYLEAFAKAGCDRITVHAESGPHLHRSLQTVRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK++IG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAGKIAAAKSMIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F +Y K + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGGTVENYRKTVADLRQAA 220
>gi|86357885|ref|YP_469777.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli CFN 42]
gi|86281987|gb|ABC91050.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli CFN 42]
Length = 225
Score = 264 bits (674), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ ++T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRDVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS +D+++ A AGCD IT H ES PH+ RSL+TI +GKK GV +NP
Sbjct: 61 TSATFDCHLMISPVDNYLEAFAKAGCDRITVHAESGPHLHRSLQTIRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMTSKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F +Y + + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGGTVENYRRTVADLRRAA 220
>gi|222086125|ref|YP_002544657.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
gi|221723573|gb|ACM26729.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
Length = 228
Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/220 (57%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF++LG+E+ ++T+AGA IH DVMDG FVPNISFGADVI+SLRSY
Sbjct: 1 MTLPIRIAPSILAADFAKLGQEVKDVTEAGADWIHLDVMDGHFVPNISFGADVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS D ++ A AGCD IT H E+ H+ RSL+TI +GKK GV +NP
Sbjct: 61 TTATFDCHLMISPADPYLEAFAKAGCDRITVHAEAGVHLHRSLQTIRNLGKKIGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ILE+V+D+ID+ILIM+VNPGFGGQ+ I + KIR AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSILENVLDDIDLILIMSVNPGFGGQKFIPAMADKIRNAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F +Y + ++DL+ +A
Sbjct: 181 ETAPLITAAGANVLVAGSAIFKGGSVEAYKQTVSDLRAAA 220
>gi|222148777|ref|YP_002549734.1| ribulose-phosphate 3-epimerase [Agrobacterium vitis S4]
gi|221735763|gb|ACM36726.1| ribulose-phosphate 3-epimerase [Agrobacterium vitis S4]
Length = 225
Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + I PSILAA+FSRLG E++++ +AGA IH DVMDG FVPNISFG VI++LR +
Sbjct: 1 MTPPLLIAPSILAANFSRLGAEVADVVEAGADWIHLDVMDGHFVPNISFGPAVIKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFDCHLMI+ D + ADAGCD IT H E+ PH+ RSL+TI A+GKK GV+INP
Sbjct: 61 TKAVFDCHLMIAPADPFLAAFADAGCDYITVHAEAGPHLHRSLQTIRALGKKAGVSINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV++LE+VID++D+ILIM+VNPGFGGQ I + KI QA+ALIG R I+LEVDGG+T
Sbjct: 121 TPVSMLENVIDDVDLILIMSVNPGFGGQSFIPAAADKIAQARALIGDRPIALEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA++LV GS+ + +G +Y + + L+ +A
Sbjct: 181 ETAPIATKAGANVLVAGSAIYKGQGIDAYRETVTALRHAA 220
>gi|327190557|gb|EGE57651.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli
CNPAF512]
Length = 225
Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMIS +D ++ A AGCD IT H ES PH+ RSL+T+ +GKK GV +NP
Sbjct: 61 TDATFDCHLMISPVDDYLEAFAKAGCDRITVHAESGPHLHRSLQTVRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAAKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F +Y K + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGGTVENYRKTVADLRQAA 220
>gi|325293239|ref|YP_004279103.1| ribulose-phosphate 3-epimerase [Agrobacterium sp. H13-3]
gi|325061092|gb|ADY64783.1| ribulose-phosphate 3-epimerase [Agrobacterium sp. H13-3]
Length = 225
Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 166/217 (76%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I+I PSILA++F++LG+E++++T+AGA IH DVMDG FVPNISFG DVI++LR +
Sbjct: 1 MSLPIRIAPSILASNFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S++ FDCHLMI+ +D ++ A AGCD IT H E+ PH+ RSL+TI +G+K GV +NP
Sbjct: 61 SNAFFDCHLMIAPVDPYLEAFAKAGCDGITVHAEAGPHLHRSLQTIRTLGRKAGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++++E+V+D++D++LIM+VNPGFGGQ+ I + + KIR AKA+IG R I LEVDGGVT+
Sbjct: 121 TPLSVIENVLDDVDLVLIMSVNPGFGGQKFIPAMLDKIRAAKAMIGDRPIELEVDGGVTA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++V AGA+ LV GS+ F G Y K ++ L+
Sbjct: 181 ETAGAIVAAGANALVAGSAVFKGDGVADYRKTVSLLR 217
>gi|218671602|ref|ZP_03521272.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli GR56]
Length = 225
Score = 258 bits (658), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 163/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMIS +D ++ A AGCD IT H ES PH+ RSL+T+ +GKK GV +NP
Sbjct: 61 TDATFDCHLMISPVDDYLEAFAKAGCDRITVHAESGPHLHRSLQTVRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAAKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F Y + + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGDTVEDYRRTVTDLRQAA 220
>gi|209549512|ref|YP_002281429.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535268|gb|ACI55203.1| Ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 225
Score = 257 bits (656), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 163/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLRSY
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS +D ++ A AGCD IT H E+ PH+ RSL+TI +GKK GV +NP
Sbjct: 61 TSATFDCHLMISPVDDYLEAFAKAGCDRITVHAEAGPHLHRSLQTIRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAAKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ ++ +AG ++LV GS+ F Y + + DL+++A
Sbjct: 181 ETVSAITRAGGNVLVAGSAIFKGATVEDYRRTIADLRQAA 220
>gi|116252344|ref|YP_768182.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv. viciae
3841]
gi|115256992|emb|CAK08086.1| putative ribulose-phosphate 3-epimerase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 225
Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 161/220 (73%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ ++T AGA IH DVMDG FVPNISFG DVI+SLRSY
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRDVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS +D ++ A AGCD IT H E+ PH+ RSL+TI +GKK GV INP
Sbjct: 61 TSATFDCHLMISPVDDYLEAFAKAGCDRITVHAEAGPHLHRSLQTIRNLGKKVGVTINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAKKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG ++LV GS+ F Y + + DL+++A
Sbjct: 181 ETAPDIARAGGNVLVAGSAIFKGDTVEDYRRTVADLRQAA 220
>gi|241204845|ref|YP_002975941.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858735|gb|ACS56402.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 225
Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 162/220 (73%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ ++T AGA IH DVMDG FVPNISFG DVI+SLRSY
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRDVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS +D ++ A AGCD IT H E+ PH+ RSL+TI +GKK GV INP
Sbjct: 61 TSATFDCHLMISPVDDYLEAFAKAGCDRITVHAEAGPHLHRSLQTIRNLGKKVGVTINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I L+VDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAKKIAAAKSLIGDRPIELQVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F Y + + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGDTVEDYRRTVADLRQAA 220
>gi|15889141|ref|NP_354822.1| ribulose-phosphate 3-epimerase [Agrobacterium tumefaciens str. C58]
gi|15156953|gb|AAK87607.1| ribulose-phosphate 3-epimerase [Agrobacterium tumefaciens str. C58]
Length = 225
Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 166/222 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I+I PSILAA+F++LG+E++++T+AGA IH DVMDG FVPNISFG DVI++LR +
Sbjct: 1 MSLPIRIAPSILAANFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S + FDCHLMI +D ++ A AGCD IT H E+ PH+ RSL+TI +G+K GV +NP
Sbjct: 61 SMAFFDCHLMIEPVDPYLEAFAKAGCDSITVHAEAGPHLHRSLQTIRGLGRKAGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++++E+V+D++D+ILIM+VNPGFGGQ+ I + + KIR AKA+IG R I LEVDGGVT+
Sbjct: 121 TPLSVIENVLDDVDLILIMSVNPGFGGQKFIPAMLDKIRAAKAMIGDRPIDLEVDGGVTA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+++ AGA+ LV GS+ F G Y K + L+ +A A
Sbjct: 181 ETAGAIIAAGANALVAGSAVFKGDGVADYRKTVAQLRMAAEA 222
>gi|227822070|ref|YP_002826041.1| Rpe; ribulose-phosphate 3-epimerase [Sinorhizobium fredii NGR234]
gi|227341070|gb|ACP25288.1| Rpe; ribulose-phosphate 3-epimerase [Sinorhizobium fredii NGR234]
Length = 224
Score = 248 bits (634), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAA+FS+LG+E+ ++ AGA IH DVMDG FVPNI+FG DVI+SLRSY
Sbjct: 1 MTHPIRIAPSILAANFSKLGQEVRDVVDAGADWIHLDVMDGHFVPNITFGPDVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMI+ DS + A AGCDI+T H E+ PH+ RSL+T+ A+GKK GV++NP
Sbjct: 61 TDATFDCHLMIAPADSFLEAFAKAGCDILTVHAEAGPHLHRSLQTVKALGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP + LE V+D +D+IL+MTVNPGFGGQ+ I KIR+ KA++G R I +EVDGG+
Sbjct: 121 TPESALEYVLDSLDLILVMTVNPGFGGQKFISVMEEKIRRIKAMVGDRPIEIEVDGGIAP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F +Y + ++ A
Sbjct: 181 ETAGVVTGAGANVLVAGSAIFKGGSVEAYRAAIEAIRTPA 220
>gi|15965509|ref|NP_385862.1| D-ribulose-5-phosphate 3-epimerase protein [Sinorhizobium meliloti
1021]
gi|15074690|emb|CAC46335.1| Probable D-ribulose-5-phosphate 3-epimerase [Sinorhizobium meliloti
1021]
Length = 226
Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI+SLR +
Sbjct: 2 MTHPIRIAPSILAADFSKLGQEVRDVAEAGADWIHLDVMDGHFVPNITFGPDVIKSLRPH 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D + A AGCDIIT H E+ PH+ RSL+T+ ++GKK GV+INP
Sbjct: 62 TRATFDCHLMIAPADPFLEAFAKAGCDIITVHAEAGPHLHRSLQTVKSLGKKAGVSINPA 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP + +E V+D +D+IL+MTVNPGFGGQ+ + +T KIR+ KA+IG R I +EVDGG+
Sbjct: 122 TPESAIEYVLDTVDLILVMTVNPGFGGQKFVGATEEKIRRIKAMIGSRPIEIEVDGGIAP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA++LV GS+ F +Y + L+ A
Sbjct: 182 DTAGVAAKAGANVLVAGSAIFKGDSVDAYRSAIEVLRTQA 221
>gi|307302629|ref|ZP_07582385.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti BL225C]
gi|307318476|ref|ZP_07597910.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti AK83]
gi|306895816|gb|EFN26568.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti AK83]
gi|306902993|gb|EFN33584.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti BL225C]
Length = 225
Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI+SLR +
Sbjct: 1 MTHPIRIAPSILAADFSKLGQEVRDVAEAGADWIHLDVMDGHFVPNITFGPDVIKSLRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D + A AGCDIIT H E+ PH+ RSL+T+ ++GKK GV+INP
Sbjct: 61 TRATFDCHLMIAPADPFLEAFAKAGCDIITVHAEAGPHLHRSLQTVKSLGKKAGVSINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP + +E V+D +D+IL+MTVNPGFGGQ+ + +T KIR+ KA+IG R I +EVDGG+
Sbjct: 121 TPESAIEYVLDTVDLILVMTVNPGFGGQKFVGATEEKIRRIKAMIGSRPIEIEVDGGIAP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA++LV GS+ F +Y + L+ A
Sbjct: 181 DTAGVAAKAGANVLVAGSAIFKGDSVDAYRSAIEVLRTQA 220
>gi|163758157|ref|ZP_02165245.1| putative pentose-5-phosphate-3-epimerase protein [Hoeflea
phototrophica DFL-43]
gi|162284446|gb|EDQ34729.1| putative pentose-5-phosphate-3-epimerase protein [Hoeflea
phototrophica DFL-43]
Length = 249
Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 154/215 (71%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFSRLG++I + +AGA IH DVMDG FVPNI+FG +I+++R + +V
Sbjct: 34 ILIAPSILSADFSRLGDDIEGVMRAGADWIHLDVMDGHFVPNITFGPGIIKAVRPRTTAV 93
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLMI D ++ ADAGCDIIT H E++ H+ RSL+ I A+GKK GV++NP TP +
Sbjct: 94 FDCHLMIEPCDPYLEAFADAGCDIITVHAEATKHLDRSLQAIRALGKKAGVSLNPSTPES 153
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E V+D +D+IL+MTVNPGFGGQ I S + K+ + K +IG R I +E+DGGVT
Sbjct: 154 VIEYVLDRLDLILLMTVNPGFGGQAFIPSVVDKVARVKKMIGDRPIHIEIDGGVTPATAP 213
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+LV GS+ F GE +AK + ++++
Sbjct: 214 LVTDAGADVLVAGSAVFKGNGETDWAKNITAIREA 248
>gi|150396702|ref|YP_001327169.1| ribulose-phosphate 3-epimerase [Sinorhizobium medicae WSM419]
gi|150028217|gb|ABR60334.1| Ribulose-phosphate 3-epimerase [Sinorhizobium medicae WSM419]
Length = 226
Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 157/220 (71%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADFS+LG+E+ ++T+AGA IH DVMDG FVPNI+FG DVI+SLR +
Sbjct: 2 MTHPIRIAPSILAADFSKLGQEVRDVTQAGADWIHLDVMDGHFVPNITFGPDVIKSLRPH 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D + A AGCDIIT H E+ PH+ RSL+T+ ++GKK GV++NP
Sbjct: 62 TQATFDCHLMIAPADPFLEAFAKAGCDIITVHAEAGPHLHRSLQTVRSLGKKAGVSLNPA 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP LE V+D +D++L+MTVNPGFGGQ+ +++T KIR+ KA+IG R I +EVDGG+
Sbjct: 122 TPEDALEYVLDTVDLVLVMTVNPGFGGQKFVDATEEKIRRIKAMIGSRPIEIEVDGGIAP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA++LV GS+ F SY + L+ A
Sbjct: 182 ETAAVAAKAGANVLVAGSAIFKGGSVESYRGAIETLRARA 221
>gi|118593302|ref|ZP_01550687.1| probable d-ribulose-5-phosphate 3-epimerase protein [Stappia
aggregata IAM 12614]
gi|118434193|gb|EAV40849.1| probable d-ribulose-5-phosphate 3-epimerase protein [Stappia
aggregata IAM 12614]
Length = 223
Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSILA+DFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI LR +
Sbjct: 1 MPRDIKIAPSILASDFSKLGQEVRDVVEAGADWIHLDVMDGHFVPNITFGPDVIAKLRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFD HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I +GKK GV++NP
Sbjct: 61 TDKVFDTHLMIAPCDPYLEAFAKAGSDIITVHAEAGPHLDRSLQAIRNLGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++LE V+D +D+IL+MTVNPGFGGQ+ I+S + K R+ + +IG R I LE+DGGVT
Sbjct: 121 TPESVLEYVLDRLDLILVMTVNPGFGGQKFIQSQVEKTRRIRQMIGDRPIDLEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F SYA ++ ++K+A
Sbjct: 181 ETAPLVAAAGANVLVAGSAVFKGGTVESYAGNISAIRKAA 220
>gi|114705296|ref|ZP_01438204.1| putative pentose-5-phosphate-3-epimerase protein [Fulvimarina
pelagi HTCC2506]
gi|114540081|gb|EAU43201.1| putative pentose-5-phosphate-3-epimerase protein [Fulvimarina
pelagi HTCC2506]
Length = 220
Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 152/215 (70%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+RLGEEI + +AGA IH DVMDG +VPNI+FG +I+++R S V
Sbjct: 4 VLIAPSILSADFARLGEEIRAVDEAGADWIHLDVMDGHYVPNITFGPPIIKAVRGASKKV 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLMI D ++ A+AGCD+IT H E++ H+ RSL I +G K GV++NP TP +
Sbjct: 64 FDCHLMIEPCDPYLQAFAEAGCDVITVHAEATTHLARSLAAIRDLGVKAGVSLNPSTPES 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E VID++D+IL+MTVNPGFGGQ+ I + K+R+ K +IG R I +E+DGGVT+
Sbjct: 124 VIEYVIDQVDLILLMTVNPGFGGQKFIHPVVEKVRRVKRMIGDRDIRIEIDGGVTTETAP 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+V AGAD+LV GS+ F SYA + ++++
Sbjct: 184 LVVAAGADVLVAGSAVFKGGTPKSYAANMKAIREA 218
>gi|153009704|ref|YP_001370919.1| ribulose-phosphate 3-epimerase [Ochrobactrum anthropi ATCC 49188]
gi|151561592|gb|ABS15090.1| Ribulose-phosphate 3-epimerase [Ochrobactrum anthropi ATCC 49188]
Length = 225
Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 155/222 (69%), Gaps = 1/222 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ ADAGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLAPFADAGCDLITIHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +VID++D++L+MTVNPGFGGQ+ I + KI++ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVIDDVDLVLVMTVNPGFGGQKFITPMLDKIKRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
S+V AGA++LV GS+ + SY + ++ +A A
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANIQAIRTAAQA 221
>gi|85709898|ref|ZP_01040963.1| ribulose-phosphate 3-epimerase [Erythrobacter sp. NAP1]
gi|85688608|gb|EAQ28612.1| ribulose-phosphate 3-epimerase [Erythrobacter sp. NAP1]
Length = 220
Score = 234 bits (598), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 152/213 (71%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE+ + AGA IH DVMDG FVPN++ G DV+++LR +SD FD
Sbjct: 6 ISPSILSADFARLGEEVRAVDAAGADWIHIDVMDGHFVPNLTIGPDVVKALRPHSDKTFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS +D ++ A+AG DIIT HPE+ PHI R+L+ I ++GKK G INP TPV +L
Sbjct: 66 VHLMISPVDPYLEAFAEAGADIITVHPEAGPHIHRTLQAIRSLGKKAGAVINPGTPVEVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
++++D +D+IL+M+VNPGFGGQ I S + K+R+ +A+I K R I LEVDGGV +
Sbjct: 126 DNIMDMVDLILVMSVNPGFGGQSFIHSQLEKVRRIRAMIEKTGREIHLEVDGGVNPDTAR 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V+AGAD+LV GS+ F + G YA + LK
Sbjct: 186 LCVEAGADVLVAGSATF-KGGPDHYAANIAALK 217
>gi|218528983|ref|YP_002419799.1| ribulose-phosphate 3-epimerase [Methylobacterium chloromethanicum
CM4]
gi|218521286|gb|ACK81871.1| Ribulose-phosphate 3-epimerase [Methylobacterium chloromethanicum
CM4]
Length = 227
Score = 234 bits (597), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 4 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP + +
Sbjct: 64 VHLMIAPADPYLAAFAEAGSDAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D +D++L+MTVNPGFGGQ I S++ + + KA+ RSI + VDGG+T
Sbjct: 124 EPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPETAGPA 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
QAGA++LV GS+ F + G Y K + ++++A
Sbjct: 184 AQAGANILVAGSAAF-KGGATQYEKNVAAIREAA 216
>gi|306841916|ref|ZP_07474596.1| ribulose-phosphate 3-epimerase [Brucella sp. BO2]
gi|306288046|gb|EFM59448.1| ribulose-phosphate 3-epimerase [Brucella sp. BO2]
Length = 225
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 149/210 (70%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R + +
Sbjct: 4 IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPRTKAF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ ADAGCD+IT H E+ PH RSL++I A+GKK G+A+NP TP
Sbjct: 64 FDAHLMIAPCDPYLEPFADAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPATPAE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 124 ALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITPETAG 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 184 SVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|220921731|ref|YP_002497032.1| ribulose-phosphate 3-epimerase [Methylobacterium nodulans ORS 2060]
gi|219946337|gb|ACL56729.1| ribulose-phosphate 3-epimerase [Methylobacterium nodulans ORS 2060]
Length = 227
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 154/220 (70%), Gaps = 1/220 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+RLGEE+ + AGA IH DVMDG FVPNI+ G DV+++LR +
Sbjct: 1 MTRPIVIAPSILSADFARLGEEVRAVVAAGADWIHVDVMDGHFVPNITIGPDVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FD HLMI+ D ++ A AG D IT H E+ PH+ R+L+TI A+GK+ GVAINP
Sbjct: 61 TDAHFDVHLMIAPADPYLEAFAKAGADTITVHAEAGPHLHRTLQTIRALGKRAGVAINPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP A +E V+D D++L MTVNPGFGGQ I S + + +A++G R I +EVDGG+T+
Sbjct: 121 TPAASVEPVLDLADLVLCMTVNPGFGGQSFIPSVCETVSRVRAMVGGRDIDIEVDGGITA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++V+AGA+ LV GS+ F + G +YA + ++++A
Sbjct: 181 ETAPAVVRAGANALVAGSATF-RGGRDAYAPNIAAIRQAA 219
>gi|300024634|ref|YP_003757245.1| ribulose-phosphate 3-epimerase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526455|gb|ADJ24924.1| ribulose-phosphate 3-epimerase [Hyphomicrobium denitrificans ATCC
51888]
Length = 223
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 151/219 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF +L +EI + AGA IH DVMDG FVPNI+FGA +I+++R
Sbjct: 1 MTRPVLIAPSILSADFGKLADEIRAVDAAGADWIHCDVMDGHFVPNITFGAPIIKAVRGA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S +FD HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I A+GKK GV++NP
Sbjct: 61 SKKIFDVHLMIAPADPYLADFAAAGADIITVHAEAGPHLDRSLQAIRALGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++E +D ID+IL+M+VNPGFGGQ I S + KIR+ KA++G R I +EVDGGVT
Sbjct: 121 TPENVIEYCLDRIDLILLMSVNPGFGGQSFIPSALEKIRRVKAMVGARPIDIEVDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+V+AGA++LV GS+ F E SYA + ++ +
Sbjct: 181 ETAPEVVKAGANVLVAGSAVFKGGSEKSYATNIAAIRNA 219
>gi|110632367|ref|YP_672575.1| ribulose-5-phosphate 3-epimerase [Mesorhizobium sp. BNC1]
gi|110283351|gb|ABG61410.1| ribulose-5-phosphate 3-epimerase [Chelativorans sp. BNC1]
Length = 223
Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 160/215 (74%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILA+DFSRLGEE++ + AGA IH D+MDG FVPNI+FG V++++R ++ V
Sbjct: 7 VKIAPSILASDFSRLGEEVTAVAAAGADWIHLDIMDGHFVPNITFGPPVVKAIRDRTNKV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLMI+ D ++ A+AGCD++T H E+ PH+ RSL+TI +GKK GV++NP TP +
Sbjct: 67 FDCHLMIAPADPYLAAFAEAGCDVLTVHAEAGPHLHRSLQTIRKLGKKAGVSLNPATPES 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E V+D++D+ILIMTVNPGFGGQ I S + KIR+ + ++G R I +EVDGG+T+ N
Sbjct: 127 AIEYVLDDVDLILIMTVNPGFGGQAFIPSAVKKIRRVRQMVGNRPIDIEVDGGITAENAG 186
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++V AGA++LV GSS F GE +Y + + ++ +
Sbjct: 187 AVVAAGANVLVAGSSIFKGNGEDAYRQNIAAIRTA 221
>gi|17987399|ref|NP_540033.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str. 16M]
gi|225627340|ref|ZP_03785377.1| ribulose-phosphate 3-epimerase [Brucella ceti str. Cudo]
gi|17983088|gb|AAL52297.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str. 16M]
gi|225617345|gb|EEH14390.1| ribulose-phosphate 3-epimerase [Brucella ceti str. Cudo]
Length = 272
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 149/209 (71%), Gaps = 1/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 48 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 106
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 107 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 166
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 167 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 226
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 227 ETAGSVVAAGANILVAGSAVYKGNSVESY 255
>gi|306844057|ref|ZP_07476652.1| ribulose-phosphate 3-epimerase [Brucella sp. BO1]
gi|306275812|gb|EFM57536.1| ribulose-phosphate 3-epimerase [Brucella sp. BO1]
Length = 225
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 147/205 (71%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R + +
Sbjct: 4 IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPRTKAF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP TP
Sbjct: 64 FDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPATPAE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 124 ALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITPETAG 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 184 SVVAAGANILVAGSAVYKGNSVESY 208
>gi|254718954|ref|ZP_05180765.1| ribulose-phosphate 3-epimerase [Brucella sp. 83/13]
gi|265983944|ref|ZP_06096679.1| ribulose-phosphate 3-epimerase [Brucella sp. 83/13]
gi|306838815|ref|ZP_07471646.1| ribulose-phosphate 3-epimerase [Brucella sp. NF 2653]
gi|264662536|gb|EEZ32797.1| ribulose-phosphate 3-epimerase [Brucella sp. 83/13]
gi|306406099|gb|EFM62347.1| ribulose-phosphate 3-epimerase [Brucella sp. NF 2653]
Length = 225
Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 147/205 (71%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R + +
Sbjct: 4 IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPRTKAF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP TP
Sbjct: 64 FDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPATPAE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 124 ALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITPETAG 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 184 SVVAAGANILVAGSAIYKGNSVESY 208
>gi|239831733|ref|ZP_04680062.1| ribulose-phosphate 3-epimerase [Ochrobactrum intermedium LMG 3301]
gi|239824000|gb|EEQ95568.1| ribulose-phosphate 3-epimerase [Ochrobactrum intermedium LMG 3301]
Length = 225
Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 150/209 (71%), Gaps = 1/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+++ FD HLMI+ D ++ ADAGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TEAFFDAHLMIAPCDPYLAPFADAGCDLITIHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +VI+++D++L+MTVNPGFGGQ+ I + KI++ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALANVIEDVDLVLVMTVNPGFGGQKFIAPMLDKIKRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESY 208
>gi|87198130|ref|YP_495387.1| ribulose-5-phosphate 3-epimerase [Novosphingobium aromaticivorans
DSM 12444]
gi|87133811|gb|ABD24553.1| ribulose-5-phosphate 3-epimerase [Novosphingobium aromaticivorans
DSM 12444]
Length = 219
Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 154/219 (70%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF+RLGEE+ I AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTPLIS--PSILSADFARLGEEVRAIDAAGADWIHVDVMDGHFVPNITIGPMVVKALRPH 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D ++ ADAG DIIT HPE+ PHI R+++ I A+GKK GV++NP
Sbjct: 59 TTKPFDVHLMISPVDGYLQAFADAGADIITVHPEAGPHIHRTVQAIKALGKKAGVSLNPG 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +ID++D++L+M+VNPGFGGQ I S + KI + +I K R I LEVDGGV
Sbjct: 119 TPAKMLDYLIDDVDLVLVMSVNPGFGGQSFISSQLRKIEAVRKMIDKSGRDIHLEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+R I+S V AGAD+LV G++ F + G YA + LK
Sbjct: 179 DTRTIRSCVDAGADVLVAGTATF-KGGPSQYAANIAALK 216
>gi|23501737|ref|NP_697864.1| ribulose-phosphate 3-epimerase [Brucella suis 1330]
gi|161618812|ref|YP_001592699.1| ribulose-phosphate 3-epimerase [Brucella canis ATCC 23365]
gi|225852362|ref|YP_002732595.1| ribulose-phosphate 3-epimerase [Brucella melitensis ATCC 23457]
gi|254701614|ref|ZP_05163442.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 5 str. 513]
gi|254704160|ref|ZP_05165988.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 3 str. 686]
gi|254706939|ref|ZP_05168767.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M163/99/10]
gi|254709953|ref|ZP_05171764.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis B2/94]
gi|256031446|ref|ZP_05445060.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M292/94/1]
gi|256044524|ref|ZP_05447428.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113384|ref|ZP_05454238.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 3 str.
Ether]
gi|256159567|ref|ZP_05457334.1| ribulose-phosphate 3-epimerase [Brucella ceti M490/95/1]
gi|256254853|ref|ZP_05460389.1| ribulose-phosphate 3-epimerase [Brucella ceti B1/94]
gi|256264139|ref|ZP_05466671.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 2 str.
63/9]
gi|256369278|ref|YP_003106786.1| ribulose-phosphate 3-epimerase [Brucella microti CCM 4915]
gi|260168580|ref|ZP_05755391.1| ribulose-phosphate 3-epimerase [Brucella sp. F5/99]
gi|260563877|ref|ZP_05834363.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str. 16M]
gi|260566592|ref|ZP_05837062.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 4 str. 40]
gi|261222035|ref|ZP_05936316.1| ribulose-phosphate 3-epimerase [Brucella ceti B1/94]
gi|261314404|ref|ZP_05953601.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M163/99/10]
gi|261317500|ref|ZP_05956697.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis B2/94]
gi|261752166|ref|ZP_05995875.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 5 str. 513]
gi|261754827|ref|ZP_05998536.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 3 str. 686]
gi|261758053|ref|ZP_06001762.1| ribulose-phosphate 3-epimerase [Brucella sp. F5/99]
gi|265988535|ref|ZP_06101092.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M292/94/1]
gi|265990949|ref|ZP_06103506.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994786|ref|ZP_06107343.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 3 str.
Ether]
gi|265997999|ref|ZP_06110556.1| ribulose-phosphate 3-epimerase [Brucella ceti M490/95/1]
gi|294852203|ref|ZP_06792876.1| ribulose-phosphate 3-epimerase [Brucella sp. NVSL 07-0026]
gi|23347663|gb|AAN29779.1| ribulose-phosphate 3-epimerase [Brucella suis 1330]
gi|161335623|gb|ABX61928.1| ribulose-phosphate 3-epimerase [Brucella canis ATCC 23365]
gi|225640727|gb|ACO00641.1| ribulose-phosphate 3-epimerase [Brucella melitensis ATCC 23457]
gi|255999438|gb|ACU47837.1| ribulose-phosphate 3-epimerase [Brucella microti CCM 4915]
gi|260153893|gb|EEW88985.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str. 16M]
gi|260156110|gb|EEW91190.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 4 str. 40]
gi|260920619|gb|EEX87272.1| ribulose-phosphate 3-epimerase [Brucella ceti B1/94]
gi|261296723|gb|EEY00220.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis B2/94]
gi|261303430|gb|EEY06927.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M163/99/10]
gi|261738037|gb|EEY26033.1| ribulose-phosphate 3-epimerase [Brucella sp. F5/99]
gi|261741919|gb|EEY29845.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 5 str. 513]
gi|261744580|gb|EEY32506.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 3 str. 686]
gi|262552467|gb|EEZ08457.1| ribulose-phosphate 3-epimerase [Brucella ceti M490/95/1]
gi|262765899|gb|EEZ11688.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 3 str.
Ether]
gi|263001733|gb|EEZ14308.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094358|gb|EEZ18203.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 2 str.
63/9]
gi|264660732|gb|EEZ30993.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M292/94/1]
gi|294820792|gb|EFG37791.1| ribulose-phosphate 3-epimerase [Brucella sp. NVSL 07-0026]
gi|326408868|gb|ADZ65933.1| ribulose-phosphate 3-epimerase [Brucella melitensis M28]
gi|326538586|gb|ADZ86801.1| ribulose-phosphate 3-epimerase [Brucella melitensis M5-90]
Length = 225
Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 147/205 (71%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R + +
Sbjct: 4 IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPRTKAF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP TP
Sbjct: 64 FDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPATPAE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 124 ALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITPETAG 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 184 SVVAAGANILVAGSAVYKGNSVESY 208
>gi|319783970|ref|YP_004143446.1| ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169858|gb|ADV13396.1| ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 228
Score = 231 bits (588), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 155/214 (72%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADFSRLG+E+ + +AGA IH DVMDG FVPNI+FG VI+++R +D +FD
Sbjct: 7 IAPSVLSADFSRLGDEVEAVVRAGADWIHLDVMDGHFVPNITFGPPVIKAIRDRTDKIFD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI+ D ++ ADAGCDIIT H E+ PH+ RSL+ I +GKK GV++NP TP +++
Sbjct: 67 CHLMIAPADPYLAAFADAGCDIITVHAEAGPHLDRSLQAIKNLGKKAGVSLNPSTPESVI 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+MTVNPGFGGQ I + I KIR+ KAL+G R I +E+DGGVT+ +
Sbjct: 127 EYVLDRLDLVLLMTVNPGFGGQAFISAVIEKIRRIKALVGHRPIDIEIDGGVTAETAPLV 186
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AGA++LV GS+ F E +Y + ++++A
Sbjct: 187 AAAGANVLVAGSAVFKGGAEAAYRANIGTIRQAA 220
>gi|237815281|ref|ZP_04594279.1| ribulose-phosphate 3-epimerase [Brucella abortus str. 2308 A]
gi|237790118|gb|EEP64328.1| ribulose-phosphate 3-epimerase [Brucella abortus str. 2308 A]
Length = 272
Score = 231 bits (588), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 148/209 (70%), Gaps = 1/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA H DVMDG FVPNI+FG V++++R
Sbjct: 48 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWAHIDVMDGHFVPNITFGPQVVKAIRPR 106
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 107 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 166
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 167 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 226
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 227 ETAGSVVAAGANILVAGSAVYKGNSVESY 255
>gi|62289796|ref|YP_221589.1| Rpe, ribulose-phosphate 3-epimerase [Brucella abortus bv. 1 str.
9-941]
gi|82699723|ref|YP_414297.1| ribulose-phosphate 3-epimerase [Brucella melitensis biovar Abortus
2308]
gi|189024037|ref|YP_001934805.1| Ribulose-phosphate 3-epimerase [Brucella abortus S19]
gi|254689101|ref|ZP_05152355.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 6 str. 870]
gi|254693584|ref|ZP_05155412.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 3 str. Tulya]
gi|254697234|ref|ZP_05159062.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 2 str.
86/8/59]
gi|254730133|ref|ZP_05188711.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 4 str. 292]
gi|256257350|ref|ZP_05462886.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 9 str. C68]
gi|260545457|ref|ZP_05821198.1| ribulose-phosphate 3-epimerase [Brucella abortus NCTC 8038]
gi|260754599|ref|ZP_05866947.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 6 str. 870]
gi|260757822|ref|ZP_05870170.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 4 str. 292]
gi|260761645|ref|ZP_05873988.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 2 str.
86/8/59]
gi|260883626|ref|ZP_05895240.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 9 str. C68]
gi|261213849|ref|ZP_05928130.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 3 str. Tulya]
gi|297248199|ref|ZP_06931917.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 5 str. B3196]
gi|62195928|gb|AAX74228.1| Rpe, ribulose-phosphate 3-epimerase [Brucella abortus bv. 1 str.
9-941]
gi|82615824|emb|CAJ10825.1| Ribulose-phosphate 3-epimerase [Brucella melitensis biovar Abortus
2308]
gi|189019609|gb|ACD72331.1| Ribulose-phosphate 3-epimerase [Brucella abortus S19]
gi|260096864|gb|EEW80739.1| ribulose-phosphate 3-epimerase [Brucella abortus NCTC 8038]
gi|260668140|gb|EEX55080.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 4 str. 292]
gi|260672077|gb|EEX58898.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 2 str.
86/8/59]
gi|260674707|gb|EEX61528.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 6 str. 870]
gi|260873154|gb|EEX80223.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 9 str. C68]
gi|260915456|gb|EEX82317.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 3 str. Tulya]
gi|297175368|gb|EFH34715.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 5 str. B3196]
Length = 225
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 148/209 (70%), Gaps = 1/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWAHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESY 208
>gi|170743524|ref|YP_001772179.1| ribulose-phosphate 3-epimerase [Methylobacterium sp. 4-46]
gi|168197798|gb|ACA19745.1| Ribulose-phosphate 3-epimerase [Methylobacterium sp. 4-46]
Length = 227
Score = 231 bits (588), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 154/220 (70%), Gaps = 1/220 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF+RLGEEI ++ AGA IH DVMDG FVPNI+ G DV+R+LR +
Sbjct: 1 MTRPLVIAPSILSADFARLGEEIRDVVAAGADWIHVDVMDGHFVPNITIGPDVVRALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A AG D IT H E+ PHI RSL+TI A+GK+ GVAINP
Sbjct: 61 TRAPFDVHLMIAPADPYLEAFAGAGADTITVHAEAGPHIHRSLQTIRALGKRAGVAINPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+P +++E ++D D++L MTVNPGFGGQ I S + + +A+ G R+I +EVDGGVT+
Sbjct: 121 SPASLVEPLLDLADLVLCMTVNPGFGGQSFIGSVCETVARVRAMAGGRAIDIEVDGGVTA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++V+AGA+ LV GS+ F + G +YA + ++ +A
Sbjct: 181 ETAPAVVRAGANALVAGSATF-RGGRDAYAANIAAIRGAA 219
>gi|298292117|ref|YP_003694056.1| ribulose-phosphate 3-epimerase [Starkeya novella DSM 506]
gi|296928628|gb|ADH89437.1| ribulose-phosphate 3-epimerase [Starkeya novella DSM 506]
Length = 228
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DF+R GEE+ + AGA IH DVMDG FVPNISFG DV++++R S FD
Sbjct: 8 ISPSILASDFARFGEEVRAVDAAGADWIHIDVMDGHFVPNISFGPDVVKAIRPLSSKPFD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D ++ A AG D I+ H E+ PH+ RSL+ I A+GKK GVAINP TP +++
Sbjct: 68 VHLMIAPVDPYLEAFAKAGADHISVHAEAGPHLHRSLQAIRALGKKAGVAINPATPASMI 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E+V+D ID+I++MTVNPGFGGQ I + K+RQ AL+G R I +E+DGGVT +
Sbjct: 128 ENVLDLIDVIIVMTVNPGFGGQAFIAPVMDKVRQISALVGDRPIDIEIDGGVTHDTAPAC 187
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ AGA+ LV GS+ F + G +YA + ++ +AL
Sbjct: 188 MLAGANALVAGSAVF-KGGASAYAGNIKAIRDAAL 221
>gi|148559803|ref|YP_001258825.1| ribulose-phosphate 3-epimerase [Brucella ovis ATCC 25840]
gi|148371060|gb|ABQ61039.1| ribulose-phosphate 3-epimerase [Brucella ovis ATCC 25840]
Length = 225
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 149/209 (71%), Gaps = 1/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLG+E+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGKEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESY 208
>gi|254503382|ref|ZP_05115533.1| ribulose-phosphate 3-epimerase [Labrenzia alexandrii DFL-11]
gi|222439453|gb|EEE46132.1| ribulose-phosphate 3-epimerase [Labrenzia alexandrii DFL-11]
Length = 223
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 151/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+LA+DFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI +R +
Sbjct: 1 MPREIIIAPSVLASDFSKLGQEVRDVVEAGADWIHLDVMDGHFVPNITFGPDVIAKMRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFD HLMI D ++ A AG DIIT H E++ H+ RSL+ I A+GKK GV++NP
Sbjct: 61 TDKVFDTHLMIEPCDPYLEAFAKAGSDIITVHAEATKHLDRSLQAIRALGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++LE V+D +D+IL+MTVNPGFGGQ+ I + + K + K +IG R I LE+DGGVT
Sbjct: 121 TPESVLEYVLDRLDLILVMTVNPGFGGQKFIGAMVEKTARIKQMIGDRPIDLEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F +Y +N ++ +A
Sbjct: 181 DTAPLVAAAGANVLVAGSAVFKGGTVDAYKTNINAIRTAA 220
>gi|254713953|ref|ZP_05175764.1| ribulose-phosphate 3-epimerase [Brucella ceti M644/93/1]
gi|254716988|ref|ZP_05178799.1| ribulose-phosphate 3-epimerase [Brucella ceti M13/05/1]
gi|261218794|ref|ZP_05933075.1| ribulose-phosphate 3-epimerase [Brucella ceti M13/05/1]
gi|261321707|ref|ZP_05960904.1| ribulose-phosphate 3-epimerase [Brucella ceti M644/93/1]
gi|260923883|gb|EEX90451.1| ribulose-phosphate 3-epimerase [Brucella ceti M13/05/1]
gi|261294397|gb|EEX97893.1| ribulose-phosphate 3-epimerase [Brucella ceti M644/93/1]
Length = 225
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 148/210 (70%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R + +
Sbjct: 4 IAIAPSILSADFARLGEEVDAMLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPRTKAF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP TP
Sbjct: 64 FDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPATPAE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L +V+D++D+IL+MTVNPGFGGQ+ I + KIR + ++G R I +EVDGG+T
Sbjct: 124 ALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRCVREMVGDRPIDIEVDGGITPETAG 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 184 SVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|163843121|ref|YP_001627525.1| ribulose-phosphate 3-epimerase [Brucella suis ATCC 23445]
gi|163673844|gb|ABY37955.1| ribulose-phosphate 3-epimerase [Brucella suis ATCC 23445]
Length = 225
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 146/205 (71%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R + +
Sbjct: 4 IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPRTKAF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP TP
Sbjct: 64 FDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPATPAE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++ R I +EVDGG+T
Sbjct: 124 ALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVSDRPIDIEVDGGITPETAG 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 184 SVVAAGANILVAGSAVYKGNSVESY 208
>gi|328542605|ref|YP_004302714.1| d-ribulose-5-phosphate 3-epimerase protein [polymorphum gilvum
SL003B-26A1]
gi|326412351|gb|ADZ69414.1| Probable d-ribulose-5-phosphate 3-epimerase protein [Polymorphum
gilvum SL003B-26A1]
Length = 231
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/224 (48%), Positives = 160/224 (71%), Gaps = 5/224 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PS+LA+DFSRL +EI + AGA IH DVMDG FVPNI+FG DVI ++R ++D
Sbjct: 5 STLIAPSMLASDFSRLRDEIKAVVGAGADWIHLDVMDGHFVPNITFGPDVIAAMRPHTDK 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I A+GKK GV++NP TP
Sbjct: 65 VFDTHLMIAPCDLYLEAFAKAGSDIITVHAEAGPHLDRSLQAIRALGKKAGVSLNPGTPE 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+++E V+D +D++L+M+VNPGFGGQ+ I + + KI + KA+IG R I +EVDGGVT+
Sbjct: 125 SVIEYVLDRLDLVLVMSVNPGFGGQKFIPAVVDKIARIKAMIGDRPIDIEVDGGVTAETA 184
Query: 184 KSLVQAGADLLVVGSSFFN----QKGEISYAKRLNDLKKSALAI 223
+ +AGA++LV GS+ F + ++ YA+++ +++++ A+
Sbjct: 185 PLVARAGANVLVAGSAVFKGGTPETADV-YARQIAAIRQASDAV 227
>gi|323138372|ref|ZP_08073442.1| ribulose-phosphate 3-epimerase [Methylocystis sp. ATCC 49242]
gi|322396319|gb|EFX98850.1| ribulose-phosphate 3-epimerase [Methylocystis sp. ATCC 49242]
Length = 226
Score = 228 bits (581), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 146/209 (69%), Gaps = 1/209 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF++LGEE + AGA IH DVMDG FVPNI+FG V+ +LR ++
Sbjct: 4 ILIAPSILSADFAKLGEETRAMEAAGADWIHLDVMDGHFVPNITFGPAVVAALRPHTTLS 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMIS ID +I ADAG DIIT H E PH+ RSL+ I A GKK GV++NP T +
Sbjct: 64 LDVHLMISPIDPYIGAFADAGADIITVHAEGGPHLHRSLQAIRARGKKAGVSLNPATHES 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ V+DEID++L+M+VNPGFGGQ I S + KIR + +IG+R I LEVDGGVT +
Sbjct: 124 ALQYVLDEIDLVLVMSVNPGFGGQSFIPSQLEKIRAIREMIGRRPIRLEVDGGVTPQTAT 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++V+AGAD LV GS+ F + G +YA +
Sbjct: 184 AIVEAGADALVAGSAAF-RGGPSAYAGNI 211
>gi|256060955|ref|ZP_05451113.1| ribulose-phosphate 3-epimerase [Brucella neotomae 5K33]
gi|261324957|ref|ZP_05964154.1| ribulose-phosphate 3-epimerase [Brucella neotomae 5K33]
gi|261300937|gb|EEY04434.1| ribulose-phosphate 3-epimerase [Brucella neotomae 5K33]
Length = 225
Score = 228 bits (580), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 148/209 (70%), Gaps = 1/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ H RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGRHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESY 208
>gi|254470021|ref|ZP_05083425.1| ribulose-phosphate 3-epimerase [Pseudovibrio sp. JE062]
gi|211960332|gb|EEA95528.1| ribulose-phosphate 3-epimerase [Pseudovibrio sp. JE062]
Length = 222
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 150/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+LA+DFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI LR +
Sbjct: 1 MAQPLVIAPSVLASDFSKLGQEVRDVVEAGADWIHLDVMDGHFVPNITFGPDVIAKLRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFD HLMI D ++ A AG D IT H E++ H+ RSL+ I A+GKK GV++NP
Sbjct: 61 TDKVFDTHLMIEPCDPYLEAFAKAGSDYITVHAEATTHLHRSLQAIRALGKKAGVSLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + LE V+D +D+IL+MTVNPGFGGQ+ I S I K+ + K++IG R I +++DGG+T
Sbjct: 121 THESYLEYVLDSVDLILVMTVNPGFGGQKFIHSQIEKVARIKSMIGDRPIRIQIDGGITP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD LV GS+ F SY + + ++ +A
Sbjct: 181 ETAPLVTKAGADTLVAGSAVFKGGTVESYRENITAIRTAA 220
>gi|254295352|ref|YP_003061375.1| ribulose-phosphate 3-epimerase [Hirschia baltica ATCC 49814]
gi|254043883|gb|ACT60678.1| ribulose-phosphate 3-epimerase [Hirschia baltica ATCC 49814]
Length = 218
Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 153/216 (70%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSILAADF++LGEE+ I AGA IH DVMDG FVPNI+ G DV+++LR +SD
Sbjct: 4 ILISPSILAADFAKLGEEVRAIDTAGADMIHIDVMDGHFVPNITIGPDVVKALRPHSDKP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS +D+++ A+AG D+IT HPE+ PH R+++ IH +GKK G A+NP TP
Sbjct: 64 FDVHLMISPVDAYLEAFANAGADLITAHPEAGPHFHRTVQAIHKLGKKAGAALNPSTPAN 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
L+ V++E+D++LIM+VNPGFGGQ I++ + KI + I G ++I LEVDGGVT
Sbjct: 124 ALDYVLEELDLVLIMSVNPGFGGQSFIDNQLRKIEDIRNRIDALGTKTI-LEVDGGVTPD 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N ++ AGA+ LV GS+ F +KG +YA ++ L+
Sbjct: 183 NCSKVINAGANALVAGSAVF-KKGPANYANAISALR 217
>gi|83310478|ref|YP_420742.1| Pentose-5-phosphate-3-epimerase [Magnetospirillum magneticum AMB-1]
gi|82945319|dbj|BAE50183.1| Pentose-5-phosphate-3-epimerase [Magnetospirillum magneticum AMB-1]
Length = 230
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 152/215 (70%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+ADF+RLGEE+ I +AG +H DVMDG FVPN++FG +I+++R Y+
Sbjct: 19 TVKIAPSILSADFARLGEEVKAIDEAGCDWVHIDVMDGHFVPNLTFGPAIIKAIRPYTTK 78
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI +I A AG DII H E+ H+ RSL+ I ++GKK GV++NP TP
Sbjct: 79 VFDVHLMIDPAQPYIEDYAKAGADIIVVHAEADKHLDRSLQLIRSLGKKAGVSLNPSTPE 138
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++++ V+D++D++L+M+VNPGFGGQ IE+ + KI + KA+IG R I LEVDGGVT+ N
Sbjct: 139 SVIQYVMDKLDLVLVMSVNPGFGGQSFIEAQLDKIARIKAMIGTRPIDLEVDGGVTADNA 198
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+V AGA++LV GS+ F K YA + L++
Sbjct: 199 HRVVAAGANVLVAGSAVFKTK---DYAANIAALRR 230
>gi|312112801|ref|YP_004010397.1| ribulose-phosphate 3-epimerase [Rhodomicrobium vannielii ATCC
17100]
gi|311217930|gb|ADP69298.1| ribulose-phosphate 3-epimerase [Rhodomicrobium vannielii ATCC
17100]
Length = 221
Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 150/215 (69%), Gaps = 3/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+R GEE+ I +AGA +H DVMDG FVPNI+FG ++ +R ++ + D
Sbjct: 7 IAPSILSADFARFGEEVRAIDEAGADWVHVDVMDGHFVPNITFGPRLVECIRPWTKKLLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I ++GKK GV++NP TP +++
Sbjct: 67 VHLMIAPADPYLEAFAKAGSDIITVHAEAGPHLDRSLQVIRSLGKKAGVSLNPSTPESVI 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D+ID++L+M+VNPGFGGQ + S + K+R+ A+I R I+LEVDGGVT L
Sbjct: 127 EYVLDKIDLVLVMSVNPGFGGQAFLPSQVEKVRRIAAMIQGRPIALEVDGGVTPETAPLL 186
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
VQAGA LV GS+ F + GE YAK + ++ + L
Sbjct: 187 VQAGATALVAGSAVF-KGGE--YAKNIAAIRDACL 218
>gi|49475718|ref|YP_033759.1| Pentose (ribulose)-5-phosphate-3-epimerase [Bartonella henselae
str. Houston-1]
gi|49238525|emb|CAF27761.1| Pentose (ribulose)-5-phosphate-3-epimerase [Bartonella henselae
str. Houston-1]
Length = 224
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 151/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS+LA++FS+LG+E+ ++ AGA IH D+MDG FVPNI+FG DV+++LR
Sbjct: 1 MPRSHLIAPSLLASNFSKLGQEVFDVIDAGADWIHLDIMDGHFVPNITFGPDVVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++FD HLMI+ D ++ A AG DIIT H E+ H+ RSL+ I +GKK G+AINP
Sbjct: 61 TKAIFDVHLMIAPADPYLEAFAKAGADIITIHAEAGLHLHRSLQKIKEIGKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+IL+MTVNPGFGGQ I KI++ K++I R I LEVDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILVMTVNPGFGGQNFIPEIKDKIKRIKSMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGA++ V GS+ + + Y R+N L+++A
Sbjct: 181 DTIGITAKAGANVFVAGSAIYKDGNKELYKTRINALRQAA 220
>gi|163868495|ref|YP_001609704.1| ribulose-phosphate 3-epimerase [Bartonella tribocorum CIP 105476]
gi|161018151|emb|CAK01709.1| ribulose-phosphate 3-epimerase [Bartonella tribocorum CIP 105476]
Length = 228
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 157/221 (71%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ I PS+LA+DFS+LG+EI ++ AGA +H D+MDG FVPNI+FG DVI++LR
Sbjct: 1 MPHSLLISPSLLASDFSKLGQEILDVVDAGADWLHLDIMDGHFVPNITFGPDVIKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++FD HLMI +D ++ A AG DIIT H E+SPH+ RSL+TI AMGKK G+A+NP
Sbjct: 61 TKAIFDVHLMIKPVDLYLEAFAKAGADIITIHAEASPHLHRSLQTIKAMGKKAGIALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFGGQ I KI++ K++I R I LEVDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGGQNFIPEIKDKIKRIKSMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGITAKAGANVFVAGSAIYKNGNKELYKTRMNALRQAAI 221
>gi|23013910|ref|ZP_00053758.1| COG0036: Pentose-5-phosphate-3-epimerase [Magnetospirillum
magnetotacticum MS-1]
Length = 213
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 150/215 (69%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+ADF+RLGEE+ I +AG +H DVMDG FVPN++FG +I+++R Y+
Sbjct: 2 TVKIAPSILSADFARLGEEVKAIDEAGCDWVHIDVMDGHFVPNLTFGPAIIKAIRPYTTK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI +I A AG DII H E+ H+ RSL+ I ++GKK GV++NP TP
Sbjct: 62 VFDVHLMIDPAQPYIEDYAKAGADIIVVHAEADKHLDRSLQLIRSLGKKAGVSLNPATPE 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+++E V+D++D++L+M+VNPGFGGQ IE+ + KI + K +IG R I LEVDGGVT+ N
Sbjct: 122 SVIEYVMDKLDLVLVMSVNPGFGGQSFIEAQLDKITRIKKMIGHRMIDLEVDGGVTADNA 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGA++LV GS+ F K YA + L++
Sbjct: 182 HRVAAAGANVLVAGSAVFKTK---DYAANIAALRR 213
>gi|92118133|ref|YP_577862.1| ribulose-phosphate 3-epimerase [Nitrobacter hamburgensis X14]
gi|91801027|gb|ABE63402.1| ribulose-5-phosphate 3-epimerase [Nitrobacter hamburgensis X14]
Length = 233
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 144/211 (68%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEE+ + + GA IH DVMDG FVPNIS+G DVI+++R ++ +FD
Sbjct: 12 IAPSILASDFSKLGEEVRAVDQGGADWIHLDVMDGHFVPNISYGPDVIKAMRPHTKKIFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP++ +
Sbjct: 72 AHLMISPCDPYLEAFAKAGCDHITVHVEAGPHLHRSLQAIRALGKKAGVSLNPATPLSTI 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+M+VNPGFGGQ+ I S + KIR +A+ R I +EVDGGV L
Sbjct: 132 EYVLDMVDLVLVMSVNPGFGGQKFITSALDKIRDLRAMTAGRPIDIEVDGGVAPDVAGEL 191
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
AGA+ V GS+ F SY ++ ++
Sbjct: 192 GAAGANAFVAGSAVFKGGTMESYKANMDAIR 222
>gi|329847340|ref|ZP_08262368.1| ribulose-phosphate 3-epimerase [Asticcacaulis biprosthecum C19]
gi|328842403|gb|EGF91972.1| ribulose-phosphate 3-epimerase [Asticcacaulis biprosthecum C19]
Length = 219
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 152/214 (71%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFSRLGEE+ IT+AGA +H DVMDG FVPNI+ G DV+++LR +++ FD
Sbjct: 6 ICPSILASDFSRLGEEVRAITEAGADFVHIDVMDGHFVPNITIGPDVVKALRPHTNLPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMIS +DS + +AG D+I+ HPE+ PH+ R+L+ I +G K GV +NP TPV IL
Sbjct: 66 CHLMISPVDSFLEAFRNAGADLISVHPEAGPHLHRTLKYIRQLGAKAGVVLNPATPVEIL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+ V++++D++LIM+VNPGFGGQ IES + KI +A + G +I L+VDGGV ++N
Sbjct: 126 DWVMEDVDLVLIMSVNPGFGGQSFIESQLRKIETVRARLDATGSAAI-LQVDGGVNAQNA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
S V AGA LV G++ F + G +YA + LK
Sbjct: 185 ASCVAAGATALVAGTAVF-KGGRDAYADNIKTLK 217
>gi|85375337|ref|YP_459399.1| pentose-5-phosphate-3-epimerase [Erythrobacter litoralis HTCC2594]
gi|84788420|gb|ABC64602.1| pentose-5-phosphate-3-epimerase [Erythrobacter litoralis HTCC2594]
Length = 221
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 151/219 (68%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ +I AGA IH DVMDG +VPNI+ G V+++LR +
Sbjct: 1 MVPPL-ISPSILSADFARLGEEVRSIDAAGADWIHVDVMDGHYVPNITIGPAVVKALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D FD HLMI+ ID ++ A+AG DIIT HPE+ PHI R+L+ I A+ KK GV +NP
Sbjct: 60 TDKPFDVHLMIAPIDPYLEAFAEAGADIITVHPEAGPHIHRTLQAIRALDKKAGVVLNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV +L++++D D++L+M+VNPGFGGQ I+S + KI + + I R I LEVDGGV
Sbjct: 120 TPVEVLDNLMDLADLVLVMSVNPGFGGQSFIDSQLGKIEKIRKRIDATGRDIHLEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ V AGAD+LV GS+ F + GE YA + LK
Sbjct: 180 NPDTARQCVDAGADVLVAGSATF-KGGEERYAANIRALK 217
>gi|24559829|gb|AAN61151.1| CbbE [Bradyrhizobium japonicum]
Length = 245
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 155/222 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSILAADF+RLGEEI+ I AGA IH DVMDG FVPNISFGADVI+++R
Sbjct: 1 MTSEILIAPSILAADFARLGEEIAAIDAAGADWIHCDVMDGHFVPNISFGADVIKAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ VFD HLMI+ +D +++ A AG D+IT H E+ PH+ R+L+ + A+GKK GV++ P
Sbjct: 61 TKKVFDVHLMIAPVDPYLDAFAKAGADVITVHAEAGPHLDRTLQAVRALGKKAGVSLCPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +E V+D ID++L+MTVNPGFGGQ +ES + KI++ + +IG R I LEVDGG+T
Sbjct: 121 TSEGAIEYVLDRIDLVLVMTVNPGFGGQSFLESQLEKIKRIRTVIGDRPIRLEVDGGITR 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
N ++ AGAD LV GS+ F K YA + ++ +A A
Sbjct: 181 ENAVAVAAAGADTLVAGSAVFRGKSSADYAGNIAAIRVAAEA 222
>gi|27377699|ref|NP_769228.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
gi|27350844|dbj|BAC47853.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
Length = 245
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 155/222 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSILAADF+RLGEEI+ I AGA IH DVMDG FVPNISFGADVI+++R
Sbjct: 1 MTSEILIAPSILAADFARLGEEIAAIDAAGADWIHCDVMDGHFVPNISFGADVIKAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ VFD HLMI+ +D +++ A AG D+IT H E+ PH+ R+L+ + A+GKK GV++ P
Sbjct: 61 TKKVFDVHLMIAPVDPYLDAFAKAGADVITVHAEAGPHLDRTLQAVRALGKKAGVSLCPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +E V+D ID++L+MTVNPGFGGQ +ES + KI++ + +IG R I LEVDGG+T
Sbjct: 121 TSEGAIEYVLDRIDLVLVMTVNPGFGGQSFLESQLEKIKRIRTVIGDRPIRLEVDGGITR 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
N ++ AGAD LV GS+ F K YA + ++ +A A
Sbjct: 181 ENAAAVAAAGADTLVAGSAVFRGKSSADYAGNIAAIRVAAEA 222
>gi|296533618|ref|ZP_06896181.1| ribulose-phosphate 3-epimerase [Roseomonas cervicalis ATCC 49957]
gi|296266056|gb|EFH12118.1| ribulose-phosphate 3-epimerase [Roseomonas cervicalis ATCC 49957]
Length = 220
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 146/204 (71%), Gaps = 2/204 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ ++I PS+LAADF+RLGEE++ I AGA +H D+MDG FVPNISFG V+++LR +
Sbjct: 1 MSRPVKIAPSLLAADFARLGEEVAAIDAAGADWLHLDIMDGHFVPNISFGPSVVKALRRH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMI+ D ++ A+AG + I+ HPE+ PH+ RSL+TI A+G GV +NP
Sbjct: 61 TRMCFDVHLMIAPADPYLAAFAEAGAERISLHPEAGPHLHRSLQTIRALGASPGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV+ +E V+D +D+IL+MTVNPGFGGQ I+S +PKI + +I R I+L++DGGV
Sbjct: 121 TPVSAIEHVMDLVDLILVMTVNPGFGGQSFIDSQLPKIATLRRMIEATGRDIALQIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
T + ++AGAD+LV G++ F
Sbjct: 181 TVKTAPRCIEAGADVLVAGTAVFG 204
>gi|237737097|ref|ZP_04567578.1| ribulose-phosphate 3-epimerase [Fusobacterium mortiferum ATCC 9817]
gi|229420959|gb|EEO36006.1| ribulose-phosphate 3-epimerase [Fusobacterium mortiferum ATCC 9817]
Length = 212
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 155/215 (72%), Gaps = 6/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PSIL+ADFS+LGEE+ I KAGA +H DVMDG FVPN++FGA VI+++R+ +D
Sbjct: 3 NIKIAPSILSADFSKLGEEVIAIDKAGADYVHIDVMDGIFVPNLTFGAPVIKAIRNKTDL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + +I A+AG DII H ES+ H+ R ++ I A GKK GV++NP TPV
Sbjct: 63 VFDVHLMIDRPERYIEDFANAGADIIVVHAESTIHLHRVIQQIKATGKKAGVSLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+L+ +ID++DM+L+M+VNPGFGGQ+ IES + KI+ +AL +++ ++VDGG+T + I
Sbjct: 123 DVLKYIIDDLDMVLVMSVNPGFGGQKFIESAVQKIKDVRAL--SKTVDIQVDGGITDKTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++AGA++ V GS F+ Y +R+ LK+
Sbjct: 181 GRCIEAGANVFVAGSYVFSG----DYKERIESLKR 211
>gi|240137500|ref|YP_002961971.1| D-ribulose-5-phosphate 3-epimerase [Methylobacterium extorquens
AM1]
gi|240007468|gb|ACS38694.1| D-ribulose-5-phosphate 3-epimerase [Methylobacterium extorquens
AM1]
Length = 227
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 4 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP + +
Sbjct: 64 VHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D +D++L+MTVNPGFGGQ I S++ + + KA+ RSI + VDGG+T
Sbjct: 124 EPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPETAGPA 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
QAGA++LV GS+ F + G Y K + ++++A
Sbjct: 184 AQAGANILVAGSAAF-KGGATQYEKNVAAIREAA 216
>gi|114328805|ref|YP_745962.1| ribulose-phosphate 3-epimerase [Granulibacter bethesdensis CGDNIH1]
gi|114316979|gb|ABI63039.1| ribulose-phosphate 3-epimerase [Granulibacter bethesdensis CGDNIH1]
Length = 224
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 147/216 (68%), Gaps = 1/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+RLG E+S++ AGA IH DVMDG FVPNI+ G V+++LR +D V
Sbjct: 8 IIIAPSILSADFARLGAEVSDVIDAGADWIHVDVMDGHFVPNITIGPAVVQALRPLTDRV 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D ++ A AG DIIT H E+ PH+ RSL I +GK+ GVAI P TP +
Sbjct: 68 LDTHLMITPADPYLEAFAKAGSDIITIHAEAGPHVDRSLAHIRQLGKQAGVAICPGTPES 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E V+D +D+IL+MTV PGFGGQ I + + KIR+ +A+IG R I LEVDGG+T I+
Sbjct: 128 AIEYVLDRLDLILVMTVEPGFGGQSFIPAMVEKIRRVRAMIGNRPIRLEVDGGITPDTIR 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ V+AGAD V GS+ F + +Y + L+ +A
Sbjct: 188 ACVEAGADTFVAGSAVFKGNRD-AYENAITALRTNA 222
>gi|254559679|ref|YP_003066774.1| D-ribulose-5-phosphate 3-epimerase [Methylobacterium extorquens
DM4]
gi|254266957|emb|CAX22756.1| D-ribulose-5-phosphate 3-epimerase [Methylobacterium extorquens
DM4]
Length = 227
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 4 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP + +
Sbjct: 64 VHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D +D++L+MTVNPGFGGQ I S++ + + KA+ RSI + VDGG+T
Sbjct: 124 EPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPETAGPA 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
QAGA++LV GS+ F + G Y K + ++++A
Sbjct: 184 AQAGANILVAGSAAF-KGGPTQYEKNVAAIREAA 216
>gi|163850424|ref|YP_001638467.1| ribulose-phosphate 3-epimerase [Methylobacterium extorquens PA1]
gi|163662029|gb|ABY29396.1| Ribulose-phosphate 3-epimerase [Methylobacterium extorquens PA1]
Length = 234
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 11 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP + +
Sbjct: 71 VHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASAI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D +D++L+MTVNPGFGGQ I S++ + + KA+ RSI + VDGG+T
Sbjct: 131 EPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPETAGPA 190
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
QAGA++LV GS+ F + G Y K + ++++A
Sbjct: 191 AQAGANILVAGSAAF-KGGPTQYEKNVAAIREAA 223
>gi|288958368|ref|YP_003448709.1| ribulose-phosphate 3-epimerase [Azospirillum sp. B510]
gi|288910676|dbj|BAI72165.1| ribulose-phosphate 3-epimerase [Azospirillum sp. B510]
Length = 217
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 152/216 (70%), Gaps = 3/216 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+ADF+RLGEE+ + AGA IH DVMDG FVPN++ G V+++LR +S
Sbjct: 3 AVKISPSILSADFARLGEEVRAVDAAGADYIHIDVMDGHFVPNLTIGPGVVKALRPHSAK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMIS +D + A AG DIIT HPE+ PH+ R+++ I ++GKK GV++NP TPV
Sbjct: 63 VFDVHLMISPVDLFVPDFAKAGADIITVHPEAGPHLHRTIQLIKSLGKKAGVSLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
++ V++++D++L+MTVNPGFGGQ I+S +PKIR+ +A I + I LEVDGG+
Sbjct: 123 DAIQHVLEDVDLVLVMTVNPGFGGQSFIKSQLPKIRELRARIDAIGKPIDLEVDGGINPE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ ++AGAD+LV G++ F G YA + L+
Sbjct: 183 TARLAIEAGADVLVAGTATFT-GGPDQYAANIKALR 217
>gi|260463402|ref|ZP_05811602.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
gi|259030727|gb|EEW32003.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
Length = 235
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 152/220 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PS+LA+DFSRLG+E+ + AGA IH DVMDG FVPNI+FG VI+++RS
Sbjct: 11 MSKKTLIAPSVLASDFSRLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRSR 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D ++ ADAGCD +T H E+ PH+ RSL+TI +GKK GV++NP
Sbjct: 71 TKAFFDCHLMIAPADPYLAAFADAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP + +E V+D +D+ILIMTVNPGFGGQ I + K+R+ KALIG R I +E+DGG+++
Sbjct: 131 TPESAVEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRRVKALIGDRPIRIEIDGGISA 190
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV G++ F +Y + ++ +A
Sbjct: 191 ETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAA 230
>gi|304393425|ref|ZP_07375353.1| ribulose-phosphate 3-epimerase [Ahrensia sp. R2A130]
gi|303294432|gb|EFL88804.1| ribulose-phosphate 3-epimerase [Ahrensia sp. R2A130]
Length = 223
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 148/213 (69%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRLG+EI + +AG +H DVMDG FVPNI+FGA +++++R+ + +VFD
Sbjct: 8 IAPSILSADFSRLGDEIEAVMEAGGDWVHLDVMDGHFVPNITFGAPIVKAVRNRTKAVFD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI D+++ A+AG DIIT H E++ H+ RSL+ I +G K GVA+NP TP + +
Sbjct: 68 CHLMIEPTDAYLKDFAEAGADIITVHAEATRHLDRSLQAIRDLGAKAGVALNPATPESEI 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
V+D +D+IL+MTVNPGFGGQ I + + K+ + + +IG R I +E+DGGVT +
Sbjct: 128 AYVLDRVDLILLMTVNPGFGGQAFIPAVVDKVARVREMIGDRPIHIEIDGGVTPTTAPMV 187
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGAD+LV GS+ F YA ++ ++KS
Sbjct: 188 FGAGADVLVAGSAVFKGGTLAHYASNIDAIRKS 220
>gi|319408633|emb|CBI82288.1| ribulose-phosphate 3-epimerase [Bartonella schoenbuchensis R1]
Length = 224
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 151/214 (70%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADFS+LG+EIS++ AGA +H D+MDG FVPNI+FG DV+++LR + ++FD
Sbjct: 7 ISPSLLAADFSKLGQEISDVVDAGADWLHLDIMDGHFVPNITFGPDVVKALRPLTKAIFD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D ++ A AG DIIT H E+ PHI RSL+TI AMGKK GV+INP TP +L
Sbjct: 67 VHLMIAPVDPYLEAFAQAGADIITIHAEAGPHIHRSLQTIKAMGKKAGVSINPSTPEHVL 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D++D+ILIMTVNPGFGGQ I KI + K +I R I LEVDGG+T I
Sbjct: 127 EYLLDQLDLILIMTVNPGFGGQSFIPEMKNKIERVKNMIANRPIDLEVDGGITVGTIGIA 186
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA+ V GS+ + + Y R+N L+++A
Sbjct: 187 AKAGANAFVAGSAIYKNGNKDLYKTRINALRQAA 220
>gi|163797842|ref|ZP_02191787.1| pentose-5-phosphate-3-epimerase [alpha proteobacterium BAL199]
gi|159176886|gb|EDP61453.1| pentose-5-phosphate-3-epimerase [alpha proteobacterium BAL199]
Length = 221
Score = 221 bits (563), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPN++ G V+++LR +
Sbjct: 1 MPRDILIAPSILSADFARLGEEVRAVAEAGADWIHIDVMDGHFVPNLTIGPAVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D FD HLMIS +D+ + DAG +I+T HPE+ H+ R+L+ + ++G K G+A+NP
Sbjct: 61 TDRTFDVHLMISPVDAFVPAFVDAGAEIVTVHPEAGAHVHRTLQLVRSLGAKAGIALNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ +L++V+D +D++L+MTVNPGFGGQ IES + KI A+A I R I L+VDGGV
Sbjct: 121 TPIEVLDNVMDLVDLVLVMTVNPGFGGQAFIESQLLKIAAARARIDATGRDIRLQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
T++ +V AGAD+LV G++ F Q G YA + LK A
Sbjct: 181 TAKTAPRVVAAGADVLVAGTATF-QGGPAEYAANIARLKAPA 221
>gi|121602542|ref|YP_989143.1| ribulose-phosphate 3-epimerase [Bartonella bacilliformis KC583]
gi|120614719|gb|ABM45320.1| ribulose-phosphate 3-epimerase [Bartonella bacilliformis KC583]
Length = 230
Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 155/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS+L+ADFS+LG+EIS++ AGA +H D+MDG FVPNI+FG D +++LR
Sbjct: 1 MVHSPIIAPSLLSADFSKLGQEISDVVDAGADWLHLDIMDGHFVPNITFGPDTVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S +VFD HLMIS +D ++ A AG DIIT H E+ PHI RSL+ I MGKK G+AINP
Sbjct: 61 SKAVFDVHLMISPVDPYLEAFAKAGADIITIHAEAGPHIHRSLQIIKIMGKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFGGQ I KI++ K +I RSI LEVDGG++
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGGQNFIPEMKDKIKRIKNMIANRSIDLEVDGGISV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + +AGA++ V GS+ + + Y R+++L+++A
Sbjct: 181 DTIGTAAKAGANVFVAGSAIYKNGNKDLYKTRISELRQAA 220
>gi|332971601|gb|EGK10551.1| ribulose-phosphate 3-epimerase [Kingella kingae ATCC 23330]
Length = 224
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 145/218 (66%), Gaps = 9/218 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + +LR ++
Sbjct: 4 RIAPSILSADFARLGEEVRNVIAAGADLIHFDVMDNHYVPNLTFGPMICAALRPHATMPI 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D IN AG DIITFHPE+S HI RSL+ I GK+ G+ +NP TP+ I
Sbjct: 64 DVHLMVEPVDDMINAFLHAGADIITFHPEASKHIDRSLQLIKNAGKQAGLVLNPATPIHI 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE V+D++DM+L+M+VNPGFGGQ I T+ K+RQ + L+ R I+LEVDGG+
Sbjct: 124 LEHVLDKLDMVLLMSVNPGFGGQAFIPHTLDKLRQTRQLLDAYQAQTGRRIALEVDGGIK 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ NI QAGAD V GS+ F G YA+ + ++
Sbjct: 184 TDNIAQAAQAGADTFVAGSAIF---GAADYAQVIQQMR 218
>gi|150376074|ref|YP_001312670.1| ribulose-phosphate 3-epimerase [Sinorhizobium medicae WSM419]
gi|150030621|gb|ABR62737.1| Ribulose-phosphate 3-epimerase [Sinorhizobium medicae WSM419]
Length = 228
Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/220 (49%), Positives = 153/220 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+FG VI++LR
Sbjct: 1 MNETTIIAPSVLSADFSRLGEEVEAVCRAGADWIHLDVMDGHFVPNITFGPPVIKALRDR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFDCHLMI+ ++ A AGCDIIT H E++ H+ R+L+ I +G K GV++NP
Sbjct: 61 TDKVFDCHLMIAPPTPYLGAFACAGCDIITVHAEATTHLDRTLQAIRDVGCKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +++E V+D +D++L+MTVNPGFGGQ I + I K+R+ K+LIG R I +E+DGGVT
Sbjct: 121 TPESVIEYVLDRLDLVLLMTVNPGFGGQDFIPAVIEKVRRVKSLIGNRPIHIEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV GS+ F E YA+ + ++ ++
Sbjct: 181 ETAPLVAAAGADVLVAGSAVFKGGSEEHYARNITAIRAAS 220
>gi|262375630|ref|ZP_06068862.1| ribulose-phosphate 3-epimerase [Acinetobacter lwoffii SH145]
gi|262309233|gb|EEY90364.1| ribulose-phosphate 3-epimerase [Acinetobacter lwoffii SH145]
Length = 228
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 152/220 (69%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGEE+ N+ +AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEEVENVLEAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVKPVDRMIGDFLEAGADIITFHPEASDHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ LI R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLDKLRQARKLIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
VT NI+ + +AGAD+ V GS+ F G+ Y +++++
Sbjct: 181 VTPSNIREIAEAGADMFVAGSAIF---GKPDYKAVIDEMR 217
>gi|103488603|ref|YP_618164.1| ribulose-phosphate 3-epimerase [Sphingopyxis alaskensis RB2256]
gi|98978680|gb|ABF54831.1| ribulose-5-phosphate 3-epimerase [Sphingopyxis alaskensis RB2256]
Length = 223
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 151/217 (69%), Gaps = 3/217 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+++I PSIL+ADF++LGEE+ I AGA +H DVMDG FVPN++ G V+++LR +S
Sbjct: 6 PAVRIAPSILSADFAKLGEEVRAIEAAGADWVHIDVMDGHFVPNLTIGPMVVKALRPHSS 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMIS +D ++ A AG DIIT HPE+ PHI R+++ I ++GK+ GV++NP TP
Sbjct: 66 LPFDVHLMISPVDHFLDAFAAAGADIITVHPEAGPHIHRTVQHIKSLGKQAGVSLNPATP 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+L+ +ID+ID++LIM+VNPGFGGQ I S + KI K +I K R I LEVDGG+ +
Sbjct: 126 AKMLDYLIDDIDLVLIMSVNPGFGGQSFIASQLRKIEAVKKMIEKSGRDIRLEVDGGIDA 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+LV G++ F + G +YA + L+
Sbjct: 186 ATAPRAISAGADVLVAGTATF-KGGPGAYADNIRRLR 221
>gi|257469504|ref|ZP_05633596.1| ribulose-phosphate 3-epimerase [Fusobacterium ulcerans ATCC 49185]
gi|317063748|ref|ZP_07928233.1| ribulose-phosphate 3-epimerase [Fusobacterium ulcerans ATCC 49185]
gi|313689424|gb|EFS26259.1| ribulose-phosphate 3-epimerase [Fusobacterium ulcerans ATCC 49185]
Length = 213
Score = 219 bits (558), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 6/218 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL+ADFSRLGEE++ I KAGA +H DVMDG FVPNI+FGA VI+++R+
Sbjct: 1 MNNDIKIAPSILSADFSRLGEEVTAIDKAGADYVHIDVMDGMFVPNITFGAPVIKAIRNK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ VFD HLMI + +I+ AG DIIT H ES+ H+ R ++ I A G K GV++NP
Sbjct: 61 TKLVFDVHLMIEKPERYIDDFVKAGADIITVHAESTVHLHRVIQQIKAHGIKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +L+ VI++IDM+LIM+VNPGFGGQ+ I S + KI+ + L + + ++VDGG+T+
Sbjct: 121 TPVDVLKYVINDIDMVLIMSVNPGFGGQKFINSALDKIKDVRVL--SKDVDIQVDGGITA 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I ++AGA++ V GS F+ Y +R+N LK+
Sbjct: 179 DTIGKCIEAGANIFVAGSYVFSG----DYEERINSLKR 212
>gi|319405625|emb|CBI79248.1| ribulose-phosphate 3-epimerase [Bartonella sp. AR 15-3]
Length = 224
Score = 219 bits (557), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/221 (51%), Positives = 155/221 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+LA+DFS+LG+E+S++ AGA IHFD+MDG FVPNISFG DVI++LR
Sbjct: 1 MSRSHLIAPSLLASDFSKLGQELSDVLDAGADWIHFDIMDGHFVPNISFGPDVIKALRPQ 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFD HLMI+ +D ++ A AG DIIT H ESS H+ RSL+ I AMGKK G+AINP
Sbjct: 61 TKAVFDVHLMIAPVDPYLEAFAKAGSDIITIHAESSTHLHRSLQMIKAMGKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T ILE ++D++D+ILIMTVNPGFGGQ I KI++ K +I R I LEVDGG+T
Sbjct: 121 TSEHILEYLLDQLDLILIMTVNPGFGGQNFIPDMENKIKRVKNMIANRPIDLEVDGGITI 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R++ L+++ +
Sbjct: 181 DTIGKTAKAGANIFVAGSAIYKNGNKNLYKTRISALRQAVI 221
>gi|253582227|ref|ZP_04859450.1| ribulose-phosphate 3-epimerase [Fusobacterium varium ATCC 27725]
gi|251835766|gb|EES64304.1| ribulose-phosphate 3-epimerase [Fusobacterium varium ATCC 27725]
Length = 218
Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 152/215 (70%), Gaps = 6/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+ADFS+LGEE+ I KAGA IH DVMDG FVPNI+FGA VI+S+R+ +
Sbjct: 9 NIKVAPSILSADFSKLGEEVIAIDKAGADYIHIDVMDGMFVPNITFGAPVIKSIRNKTKL 68
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + +I+ AG DIIT H ES+ H+ R ++ I A G K GV++NP TPV
Sbjct: 69 VFDVHLMIEKPERYIDDFVKAGADIITVHAESTVHLHRVIQQIKAYGIKAGVSLNPSTPV 128
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+L+ +I++IDM+LIM+VNPGFGGQ+ I S I KI+ + L +S+ ++VDGG+T+ I
Sbjct: 129 DVLKYIINDIDMVLIMSVNPGFGGQKFINSAIDKIKDVRKL--NKSVDIQVDGGITADTI 186
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++AGA++ V GS F+ Y +R+N LK+
Sbjct: 187 GKCIEAGANIFVAGSYVFSG----DYKERINSLKR 217
>gi|13473989|ref|NP_105557.1| pentose(ribulose)-5-phosphate-3-epimerase [Mesorhizobium loti
MAFF303099]
gi|14024740|dbj|BAB51343.1| pentose (ribulose)-5-phosphate-3-epimerase [Mesorhizobium loti
MAFF303099]
Length = 225
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 151/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PS+LA+DFS+LG+E+ + AGA IH DVMDG FVPNI+FG VI+++R+
Sbjct: 1 MSTKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D ++ A+AGCD +T H E+ PH+ RSL+TI +GKK GV++NP
Sbjct: 61 TKAFFDCHLMIAPADPYLAAFAEAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++E V+D +D+ILIMTVNPGFGGQ I + K+R+ KALIG R I +E+DGGV+
Sbjct: 121 TPETMIEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRRVKALIGDRPIRIEIDGGVSP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV G++ F +Y + ++ +A
Sbjct: 181 ETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAA 220
>gi|228960076|ref|ZP_04121740.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228799592|gb|EEM46545.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 214
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
K V+AGA++LV GS+ +NQK
Sbjct: 182 AKLCVEAGANVLVAGSAVYNQK 203
>gi|194098682|ref|YP_002001744.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
NCCP11945]
gi|239998990|ref|ZP_04718914.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
35/02]
gi|240014100|ref|ZP_04721013.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
DGI18]
gi|240016535|ref|ZP_04723075.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
FA6140]
gi|240080659|ref|ZP_04725202.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
FA19]
gi|240112976|ref|ZP_04727466.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
MS11]
gi|240115730|ref|ZP_04729792.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
PID18]
gi|240118026|ref|ZP_04732088.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
PID1]
gi|240121662|ref|ZP_04734624.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
PID24-1]
gi|240123580|ref|ZP_04736536.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
PID332]
gi|240125762|ref|ZP_04738648.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
SK-92-679]
gi|240128284|ref|ZP_04740945.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
SK-93-1035]
gi|254493781|ref|ZP_05106952.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae 1291]
gi|260440458|ref|ZP_05794274.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
DGI2]
gi|268594838|ref|ZP_06129005.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae 35/02]
gi|268596782|ref|ZP_06130949.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae FA19]
gi|268599056|ref|ZP_06133223.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae MS11]
gi|268601409|ref|ZP_06135576.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID18]
gi|268603740|ref|ZP_06137907.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID1]
gi|268682209|ref|ZP_06149071.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID332]
gi|268684360|ref|ZP_06151222.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae SK-92-679]
gi|268686681|ref|ZP_06153543.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae SK-93-1035]
gi|291043757|ref|ZP_06569473.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae DGI2]
gi|293399042|ref|ZP_06643207.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae F62]
gi|193933972|gb|ACF29796.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
NCCP11945]
gi|226512821|gb|EEH62166.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae 1291]
gi|268548227|gb|EEZ43645.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae 35/02]
gi|268550570|gb|EEZ45589.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae FA19]
gi|268583187|gb|EEZ47863.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae MS11]
gi|268585540|gb|EEZ50216.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID18]
gi|268587871|gb|EEZ52547.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID1]
gi|268622493|gb|EEZ54893.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID332]
gi|268624644|gb|EEZ57044.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae SK-92-679]
gi|268626965|gb|EEZ59365.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae SK-93-1035]
gi|291012220|gb|EFE04209.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae DGI2]
gi|291610456|gb|EFF39566.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae F62]
gi|317164282|gb|ADV07823.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 227
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 AYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EVDGG
Sbjct: 123 YVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEGKSGRRIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI ++ +AGAD V GS+ F +
Sbjct: 183 IKTDNIAAVARAGADTFVAGSAIFGK 208
>gi|59801173|ref|YP_207885.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae FA
1090]
gi|59718068|gb|AAW89473.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae FA
1090]
Length = 230
Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 AYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EVDGG
Sbjct: 123 YVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEGKSGRRIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI ++ +AGAD V GS+ F +
Sbjct: 183 IKTDNIAAVARAGADTFVAGSAIFGK 208
>gi|196035873|ref|ZP_03103275.1| ribulose-phosphate 3-epimerase [Bacillus cereus W]
gi|195991522|gb|EDX55488.1| ribulose-phosphate 3-epimerase [Bacillus cereus W]
Length = 214
Score = 218 bits (555), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 147/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV ++
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|86750799|ref|YP_487295.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris HaA2]
gi|86573827|gb|ABD08384.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris HaA2]
Length = 232
Score = 218 bits (555), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 147/214 (68%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFSRLGEE+ + +AGA IH DVMDG FVPNIS+G DVI+++R ++ +FD
Sbjct: 11 IAPSILASDFSRLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIKAMRPHTTKIFD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP + L
Sbjct: 71 AHLMIAPCDPYLEAFAKAGCDHITIHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPASAL 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E VID ID++L+M+VNPGFGGQ I S I KI+ +A+ R I +EVDGGV+ + +
Sbjct: 131 EYVIDMIDLVLVMSVNPGFGGQAFIPSAINKIQDIRAMTAGRPIDIEVDGGVSDKVSGQI 190
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AGA+ V GS+ F SY ++ ++ +A
Sbjct: 191 AAAGANAFVAGSAVFKGGTVESYKANIDAIRNAA 224
>gi|148252061|ref|YP_001236646.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
gi|146404234|gb|ABQ32740.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
Length = 243
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 147/222 (66%), Gaps = 3/222 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G E I G +H DVMDG FVPNI+FG + R++R + +
Sbjct: 6 SIKIAPSILSADFAAFGAECRAIEAQGCDWVHVDVMDGHFVPNITFGPQLCRAIRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ A+AG D+IT H E+ PH+ R+L+ I A G K GV++NP TP
Sbjct: 66 VMDVHLMITPVDPYIHAFAEAGADVITAHVEAGPHLDRTLQAIRAAGAKAGVSLNPSTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E V+D ID++L+MTVNPGFGGQ IE+ +PKIR+ + ++G R I +EVDGGVT
Sbjct: 126 EAIEFVLDRIDLVLVMTVNPGFGGQSFIEAMVPKIRRLREMVGDRPIHIEVDGGVTPATA 185
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLKKSALA 222
+ AGAD+LV GS+ F + Y + + ++++A A
Sbjct: 186 PLVAAAGADVLVAGSAVFKGGSAADPAPYGRNILAIREAATA 227
>gi|296282066|ref|ZP_06860064.1| pentose-5-phosphate-3-epimerase [Citromicrobium bathyomarinum
JL354]
Length = 221
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 145/213 (68%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE+ ++ AGA IH DVMDG FVPN++ G V+++LR +SD FD
Sbjct: 6 IAPSILSADFARLGEEVRSVDAAGADWIHIDVMDGHFVPNLTIGPGVVKALRPHSDKPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S +D + A+AG D IT HPE+ PH R+L+TI ++GKK GV +NP T ++L
Sbjct: 66 VHLMVSPVDQWLEAFAEAGADHITIHPEAGPHTHRTLQTIRSLGKKAGVVLNPGTSESVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E +ID +D++L+M+VNPGFGGQ I+S + KI + +I R I LEVDGGV +
Sbjct: 126 EYLIDMVDLVLVMSVNPGFGGQSFIDSQLRKIEAIRTMIDATGREIWLEVDGGVDAETAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V AGAD+LV GS+ F + G YA + LK
Sbjct: 186 RCVAAGADVLVAGSATF-RGGPDRYAANIERLK 217
>gi|188580200|ref|YP_001923645.1| ribulose-phosphate 3-epimerase [Methylobacterium populi BJ001]
gi|179343698|gb|ACB79110.1| Ribulose-phosphate 3-epimerase [Methylobacterium populi BJ001]
Length = 227
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 4 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP +++
Sbjct: 64 VHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASMI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+MTVNPGFGGQ I S + I + KA+ R I + VDGG+T+
Sbjct: 124 EPVLDMVDLVLVMTVNPGFGGQSFIGSALETIARVKAMTAGRDIDISVDGGITAETAGPA 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRL 213
QAGA++LV GS+ F + G Y K +
Sbjct: 184 AQAGANILVAGSAAF-KGGPDHYEKNV 209
>gi|319780462|ref|YP_004139938.1| ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166350|gb|ADV09888.1| ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 225
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 154/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PS+LA+DFS+LG+E+ + AGA IH DVMDG FVPNI+FG VI+++R+
Sbjct: 1 MSRKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D ++ A+AGCD +T H E+ PH+ RSL+TI +GKK GV++NP
Sbjct: 61 TKAFFDCHLMIAPADPYLAAFAEAGCDGLTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +++E V+D +D+ILIMTVNPGFGGQ I + + K+ + KAL+G R I +E+DGGV++
Sbjct: 121 TPESVVEYVLDRLDLILIMTVNPGFGGQAFIPAIVDKVTRVKALVGGRPIRIEIDGGVSA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV G++ F +Y + + ++ +A
Sbjct: 181 ETAPLVTAAGADVLVAGAAIFKGGSVEAYRQNIQAIRTAA 220
>gi|298290444|ref|YP_003692383.1| ribulose-phosphate 3-epimerase [Starkeya novella DSM 506]
gi|296926955|gb|ADH87764.1| ribulose-phosphate 3-epimerase [Starkeya novella DSM 506]
Length = 226
Score = 218 bits (555), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 139/196 (70%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA+DF+RLGEE+ + AGA IH DVMDG FVPNI+FG DVI+++R ++D VFD
Sbjct: 4 IAPSMLASDFARLGEEVRAVDAAGADWIHLDVMDGHFVPNITFGPDVIKAMRPHTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ ++ +I A AG DIIT E++ H+ R L+ I ++GKK GVA+NP T ++L
Sbjct: 64 VHLMIAPVEPYIEAFAKAGADIITVQAEATDHLDRCLQLIRSLGKKAGVALNPATHESVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
V+++ D+IL MTVNPGFGGQ I +PK+ + +A+IG R I LEVDGGVT
Sbjct: 124 AYVLEKTDLILAMTVNPGFGGQAFIPDVVPKLHRLRAMIGGRPIHLEVDGGVTPETAPLC 183
Query: 187 VQAGADLLVVGSSFFN 202
+AGA++LV GS+ F
Sbjct: 184 TEAGANVLVAGSAVFK 199
>gi|75763206|ref|ZP_00742969.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899013|ref|YP_002447424.1| ribulose-phosphate 3-epimerase [Bacillus cereus G9842]
gi|228902364|ref|ZP_04066520.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis IBL 4222]
gi|228966809|ref|ZP_04127853.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|74489303|gb|EAO52756.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218546011|gb|ACK98405.1| ribulose-phosphate 3-epimerase [Bacillus cereus G9842]
gi|228792908|gb|EEM40466.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228857262|gb|EEN01766.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis IBL 4222]
Length = 214
Score = 218 bits (554), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHAEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|30263863|ref|NP_846240.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Ames]
gi|42782952|ref|NP_980199.1| ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 10987]
gi|47529289|ref|YP_020638.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186710|ref|YP_029962.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Sterne]
gi|49478420|ref|YP_037921.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118479082|ref|YP_896233.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis str. Al
Hakam]
gi|165872286|ref|ZP_02216923.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0488]
gi|167641108|ref|ZP_02399363.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0193]
gi|170688814|ref|ZP_02880017.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0465]
gi|170708794|ref|ZP_02899230.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0389]
gi|177654929|ref|ZP_02936646.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0174]
gi|190565885|ref|ZP_03018804.1| ribulose-phosphate 3-epimerase [Bacillus anthracis Tsiankovskii-I]
gi|196038712|ref|ZP_03106020.1| ribulose-phosphate 3-epimerase [Bacillus cereus NVH0597-99]
gi|196047432|ref|ZP_03114644.1| ribulose-phosphate 3-epimerase [Bacillus cereus 03BB108]
gi|206976755|ref|ZP_03237659.1| ribulose-phosphate 3-epimerase [Bacillus cereus H3081.97]
gi|217961280|ref|YP_002339848.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH187]
gi|218904990|ref|YP_002452824.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH820]
gi|222097305|ref|YP_002531362.1| ribulose-phosphate 3-epimerase [Bacillus cereus Q1]
gi|225865841|ref|YP_002751219.1| ribulose-phosphate 3-epimerase [Bacillus cereus 03BB102]
gi|227813232|ref|YP_002813241.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. CDC 684]
gi|228916497|ref|ZP_04080063.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228928908|ref|ZP_04091940.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935174|ref|ZP_04098001.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947579|ref|ZP_04109869.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229092903|ref|ZP_04224037.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-42]
gi|229123374|ref|ZP_04252578.1| Ribulose-phosphate 3-epimerase [Bacillus cereus 95/8201]
gi|229140506|ref|ZP_04269061.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST26]
gi|229186100|ref|ZP_04313269.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BGSC 6E1]
gi|229197971|ref|ZP_04324685.1| Ribulose-phosphate 3-epimerase [Bacillus cereus m1293]
gi|229601030|ref|YP_002868097.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0248]
gi|254683431|ref|ZP_05147291.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. CNEVA-9066]
gi|254721392|ref|ZP_05183181.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A1055]
gi|254735899|ref|ZP_05193605.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Western
North America USA6153]
gi|254751043|ref|ZP_05203082.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Vollum]
gi|254756708|ref|ZP_05208737.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Australia
94]
gi|301055351|ref|YP_003793562.1| ribulose-phosphate 3-epimerase [Bacillus anthracis CI]
gi|30258507|gb|AAP27726.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Ames]
gi|42738879|gb|AAS42807.1| ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 10987]
gi|47504437|gb|AAT33113.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180637|gb|AAT56013.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Sterne]
gi|49329976|gb|AAT60622.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118418307|gb|ABK86726.1| ribulose-5-phosphate 3-epimerase [Bacillus thuringiensis str. Al
Hakam]
gi|164711962|gb|EDR17502.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0488]
gi|167510888|gb|EDR86279.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0193]
gi|170126279|gb|EDS95170.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0389]
gi|170667169|gb|EDT17929.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0465]
gi|172080440|gb|EDT65527.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0174]
gi|190562804|gb|EDV16770.1| ribulose-phosphate 3-epimerase [Bacillus anthracis Tsiankovskii-I]
gi|196021740|gb|EDX60435.1| ribulose-phosphate 3-epimerase [Bacillus cereus 03BB108]
gi|196030435|gb|EDX69034.1| ribulose-phosphate 3-epimerase [Bacillus cereus NVH0597-99]
gi|206745065|gb|EDZ56468.1| ribulose-phosphate 3-epimerase [Bacillus cereus H3081.97]
gi|217063561|gb|ACJ77811.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH187]
gi|218537513|gb|ACK89911.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH820]
gi|221241363|gb|ACM14073.1| ribulose-phosphate 3-epimerase [Bacillus cereus Q1]
gi|225789555|gb|ACO29772.1| ribulose-phosphate 3-epimerase [Bacillus cereus 03BB102]
gi|227005075|gb|ACP14818.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. CDC 684]
gi|228585450|gb|EEK43554.1| Ribulose-phosphate 3-epimerase [Bacillus cereus m1293]
gi|228597276|gb|EEK54927.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BGSC 6E1]
gi|228643067|gb|EEK99343.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST26]
gi|228660150|gb|EEL15786.1| Ribulose-phosphate 3-epimerase [Bacillus cereus 95/8201]
gi|228690525|gb|EEL44308.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-42]
gi|228812099|gb|EEM58430.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824539|gb|EEM70344.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830715|gb|EEM76320.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843076|gb|EEM88158.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229265438|gb|ACQ47075.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0248]
gi|300377520|gb|ADK06424.1| ribulose-phosphate 3-epimerase [Bacillus cereus biovar anthracis
str. CI]
gi|324327758|gb|ADY23018.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 214
Score = 218 bits (554), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|90420024|ref|ZP_01227933.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Aurantimonas manganoxydans SI85-9A1]
gi|90336065|gb|EAS49813.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Aurantimonas manganoxydans SI85-9A1]
Length = 226
Score = 218 bits (554), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 146/202 (72%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF+RLGEE++ + +AGA IH DVMDG FVPNI+FG VI+++R
Sbjct: 1 MAKPVIIAPSILSADFARLGEEVAAVDQAGADWIHLDVMDGHFVPNITFGPPVIKAVRGA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S +FDCHLMI DS++ A+AGCD IT H E++ H+ RSL+ I +GKK GV++NP
Sbjct: 61 SQKIFDCHLMIEPCDSYLEAFAEAGCDYITVHAEATKHLDRSLQAIRNLGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++ V+D +D++L+MTVNPGFGGQ I S + K+R+ KA+IG R I +E+DGGVT
Sbjct: 121 TPEDVIAYVLDRLDLVLLMTVNPGFGGQAFIPSVVEKVRRVKAMIGDRDIHIEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
+V+AGA++LV GS+ F
Sbjct: 181 ETAPLVVEAGANVLVAGSAVFK 202
>gi|307945572|ref|ZP_07660908.1| ribulose-phosphate 3-epimerase [Roseibium sp. TrichSKD4]
gi|307771445|gb|EFO30670.1| ribulose-phosphate 3-epimerase [Roseibium sp. TrichSKD4]
Length = 223
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 152/220 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PSILA+DFS+LG+E+ N+ +AGA IH DVMDG FVPNI+FG DVI LR +
Sbjct: 1 MSKDVLIAPSILASDFSKLGQEVRNVVEAGADWIHLDVMDGHFVPNITFGPDVIAKLRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFD HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I +GKK GV++NP
Sbjct: 61 TDKVFDTHLMIAPCDPYLEAFAKAGSDIITVHAEAGPHLDRSLQAIRNLGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++E V+D +D++L+MTVNPGFGGQ+ I + K+++ K +IG R I +E+DGGVT
Sbjct: 121 TPENVIEYVLDRLDLVLLMTVNPGFGGQKFIHPVVEKVKRIKDMIGDRRIDIEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F SY ++ ++ +A
Sbjct: 181 ETAPLVAAAGANVLVAGSAVFKGDSVESYRTNIDAIRSAA 220
>gi|52141629|ref|YP_085201.1| ribulose-phosphate 3-epimerase [Bacillus cereus E33L]
gi|229098329|ref|ZP_04229276.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-29]
gi|229117346|ref|ZP_04246724.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock1-3]
gi|51975098|gb|AAU16648.1| ribulose-phosphate 3-epimerase [Bacillus cereus E33L]
gi|228666246|gb|EEL21710.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock1-3]
gi|228685227|gb|EEL39158.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-29]
Length = 214
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|310779112|ref|YP_003967445.1| ribulose-5-phosphate 3-epimerase [Ilyobacter polytropus DSM 2926]
gi|309748435|gb|ADO83097.1| ribulose-5-phosphate 3-epimerase [Ilyobacter polytropus DSM 2926]
Length = 209
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 154/214 (71%), Gaps = 6/214 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI++IT+AGA IH DVMDG FVPNISFG VI+S+R S+
Sbjct: 2 IKIAPSILSADFSKLGEEITSITEAGADMIHIDVMDGMFVPNISFGPVVIKSIRDKSNLC 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + +I+ AG D+IT H ES+ H+ R+++ I A G K V++NP T V
Sbjct: 62 FDVHLMIENPERYIDEFVKAGADLITVHAESTTHLHRTIQQIKAHGVKAAVSLNPATSVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ +IDE+DM+L+M+VNPGFGGQ+ I ST+ KI++ +++ +I ++VDGG+T + +K
Sbjct: 122 SLKYIIDELDMVLLMSVNPGFGGQKFIPSTLEKIKEVRSM--NANIDIQVDGGITDKTVK 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++AGA++ V GS F+ +Y +R+ LKK
Sbjct: 180 GCIEAGANVFVAGSYVFSG----NYKERIESLKK 209
>gi|229192029|ref|ZP_04318999.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 10876]
gi|228591580|gb|EEK49429.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 10876]
Length = 214
Score = 218 bits (554), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGAHYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|316932899|ref|YP_004107881.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris DX-1]
gi|315600613|gb|ADU43148.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris DX-1]
Length = 232
Score = 217 bits (553), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 149/218 (68%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSILA+DFS+LGEE+ + AG IH DVMDG FVPNIS+G DVI+++R ++ V
Sbjct: 9 LAIAPSILASDFSKLGEEVRAVDTAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTKKV 68
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ A AGCDIIT H E+ PH+ RSL+ I +GKK GV++NP T +
Sbjct: 69 FDAHLMIAPCDPYLEAFAKAGCDIITVHAEAGPHLHRSLQAIRGLGKKAGVSLNPGTHPS 128
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E V+D+ID++L+M+VNPGFGGQ I S + KIRQ +A++ R I +EVDGGV+ +
Sbjct: 129 AIEYVLDDIDLVLVMSVNPGFGGQAFIPSAVQKIRQIRAMVADRPIDIEVDGGVSDKVAG 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
L AGA+ V GS+ F SY + ++ +A++
Sbjct: 189 ELAAAGANAFVAGSAVFKGGTLESYKANIAGIRNAAMS 226
>gi|319404179|emb|CBI77772.1| ribulose-phosphate 3-epimerase [Bartonella rochalimae ATCC
BAA-1498]
Length = 224
Score = 217 bits (553), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 154/221 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+LA+DFS+LG+E+S++ AGA IH D+MDG FVPNI+FG DV+++LR
Sbjct: 1 MSRSHLIAPSLLASDFSKLGQELSDVLDAGADWIHLDIMDGHFVPNITFGPDVVKALRPQ 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFD HLMI +D ++ A AG DIIT H ESS H+ RSL+ I AMGKK G+AINP
Sbjct: 61 TKAVFDVHLMIKPVDPYLESFAKAGSDIITIHAESSTHLHRSLQMIKAMGKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +LE ++D++D+ILIMTVNPGFGGQ I KI++ K +I R I LEVDGG+T
Sbjct: 121 TSEHVLEYLLDQLDLILIMTVNPGFGGQNFIPDMEDKIKRVKNMIANRPIDLEVDGGITI 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGKTAKAGANVFVAGSAIYKNGNKELYKTRINALRQAAI 221
>gi|319898863|ref|YP_004158956.1| ribulose-phosphate 3-epimerase [Bartonella clarridgeiae 73]
gi|319402827|emb|CBI76378.1| ribulose-phosphate 3-epimerase [Bartonella clarridgeiae 73]
Length = 224
Score = 217 bits (553), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 154/221 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+LA+DFS+LG+E+S++ AGA IH D+MDG FVPNI+FG DV+++LR
Sbjct: 1 MSRSHLIAPSLLASDFSKLGQELSDVIDAGADWIHLDIMDGHFVPNITFGPDVVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFD HLMI+ +D +I A G DIIT H ESS H+ RSL+ I AMGKK G+A+NP
Sbjct: 61 TKAVFDVHLMIAPVDPYIEAFAKVGSDIITIHAESSTHLHRSLQIIKAMGKKAGIAVNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T ILE ++D++D+ILIMTVNPGFGGQ I KI++ K +I R I LEVDGG+T
Sbjct: 121 TSEHILEYLLDQLDLILIMTVNPGFGGQSFILEMEDKIKRVKNMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGKTAKAGANVFVAGSAIYKNGNKNLYKTRINALRQAAI 221
>gi|152976226|ref|YP_001375743.1| ribulose-phosphate 3-epimerase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024978|gb|ABS22748.1| Ribulose-phosphate 3-epimerase [Bacillus cytotoxicus NVH 391-98]
Length = 214
Score = 217 bits (553), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDHYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
I+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q +I +R+ + +EVDGGV +
Sbjct: 122 IIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVSEMIKERNLQVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA++LV GS+ +NQK
Sbjct: 182 ARLCIEAGANVLVAGSAVYNQK 203
>gi|206971355|ref|ZP_03232306.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH1134]
gi|218230927|ref|YP_002368661.1| ribulose-phosphate 3-epimerase [Bacillus cereus B4264]
gi|228909685|ref|ZP_04073508.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis IBL 200]
gi|228922614|ref|ZP_04085914.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954137|ref|ZP_04116165.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229047547|ref|ZP_04193137.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH676]
gi|229071358|ref|ZP_04204581.1| Ribulose-phosphate 3-epimerase [Bacillus cereus F65185]
gi|229081115|ref|ZP_04213625.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock4-2]
gi|229111331|ref|ZP_04240884.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock1-15]
gi|229146431|ref|ZP_04274802.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST24]
gi|229152059|ref|ZP_04280254.1| Ribulose-phosphate 3-epimerase [Bacillus cereus m1550]
gi|229180136|ref|ZP_04307480.1| Ribulose-phosphate 3-epimerase [Bacillus cereus 172560W]
gi|296504355|ref|YP_003666055.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis BMB171]
gi|206734127|gb|EDZ51298.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH1134]
gi|218158884|gb|ACK58876.1| ribulose-phosphate 3-epimerase [Bacillus cereus B4264]
gi|228603345|gb|EEK60822.1| Ribulose-phosphate 3-epimerase [Bacillus cereus 172560W]
gi|228631408|gb|EEK88042.1| Ribulose-phosphate 3-epimerase [Bacillus cereus m1550]
gi|228637064|gb|EEK93523.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST24]
gi|228672107|gb|EEL27398.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock1-15]
gi|228702159|gb|EEL54635.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock4-2]
gi|228711812|gb|EEL63764.1| Ribulose-phosphate 3-epimerase [Bacillus cereus F65185]
gi|228723794|gb|EEL75149.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH676]
gi|228805457|gb|EEM52048.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228837043|gb|EEM82384.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228849974|gb|EEM94805.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis IBL 200]
gi|296325407|gb|ADH08335.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis BMB171]
Length = 214
Score = 217 bits (553), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|95928559|ref|ZP_01311306.1| Ribulose-phosphate 3-epimerase [Desulfuromonas acetoxidans DSM 684]
gi|95135349|gb|EAT17001.1| Ribulose-phosphate 3-epimerase [Desulfuromonas acetoxidans DSM 684]
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RLG EI + +AGA IH DVMDG FVPNI+ GA V+ +LR ++
Sbjct: 2 IKISPSILSADFARLGAEIRTVEQAGADYIHVDVMDGHFVPNITIGAPVVGALRQVTELP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DIIT H E+ PH+ R+++ IH++GKK GV+INP TP
Sbjct: 62 LDVHLMIENPDLYIPDFAKAGSDIITVHQEAVPHLHRTVQLIHSLGKKAGVSINPATPAG 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
LE ++ E+D++L+MTVNPGFGGQ I +T+ KI Q + +I + R I LEVDGGV + N
Sbjct: 122 ALEVIMAEVDLVLVMTVNPGFGGQSFIPATLNKITQLREMIDRTGRDIELEVDGGVKADN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + AGAD+ V GS+ FN + L D
Sbjct: 182 IGEIAAAGADVFVAGSAVFNAPDYTQAIQALRD 214
>gi|294010237|ref|YP_003543697.1| ribulose-phosphate 3-epimerase [Sphingobium japonicum UT26S]
gi|292673567|dbj|BAI95085.1| ribulose-phosphate 3-epimerase [Sphingobium japonicum UT26S]
Length = 220
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 151/219 (68%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+RLGEE+ I +AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTSPILISPSILSADFARLGEEVRAIDEAGADWIHIDVMDGHFVPNITIGPGVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D ++N A+AG DI+T HPE+ PHI RS++ I ++G + GV +NP
Sbjct: 61 TKKPFDVHLMISPVDQYLNAFAEAGADILTVHPEAGPHIHRSIQHIKSLGVQAGVVLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +ID++D+IL+M+VNPGFGGQ I + + KI + +I K R I L+VDGG+
Sbjct: 121 TPAKMLDYLIDDVDLILVMSVNPGFGGQSFIANQLRKIEAIRKMIEKSGRDIRLQVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++AGAD+LV G++ F + G +YA + L+
Sbjct: 181 DFTTAPLAIEAGADVLVAGTATF-RGGASAYADNIRTLR 218
>gi|332188793|ref|ZP_08390504.1| ribulose-phosphate 3-epimerase [Sphingomonas sp. S17]
gi|332011192|gb|EGI53286.1| ribulose-phosphate 3-epimerase [Sphingomonas sp. S17]
Length = 215
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 147/215 (68%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGEE+ I AGA IH DVMDG FVPNI+ G V+++LR ++
Sbjct: 1 MRIAPSILSADFARLGEEVRAIDAAGADWIHIDVMDGHFVPNITIGPAVVKALRPHTAKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS ID++++ A+AG D IT HPE+ PHI R+++ I +GK+ GV +NP TP
Sbjct: 61 FDVHLMISPIDAYLDAFAEAGADTITVHPEAGPHIHRTIQHIKGLGKRAGVVLNPATPAK 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+L+ +ID +D++L+M+VNPGFGGQ IES + KI + +I R+I LEVDGGV
Sbjct: 121 MLDYLIDMVDLVLVMSVNPGFGGQSFIESQLKKISAIRKMIEHSGRAIDLEVDGGVDPHW 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K ++AGAD LV G++ F + G Y + L+
Sbjct: 181 AKRCIEAGADALVAGTAAF-RGGPSQYTANIAALR 214
>gi|332977863|gb|EGK14613.1| ribulose-phosphate 3-epimerase [Psychrobacter sp. 1501(2011)]
Length = 231
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 143/200 (71%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N+ K+GA +HFDVMD +VPN++FG+ + +LR Y D+
Sbjct: 10 IAPSILSADFARLGEEVENVLKSGADVVHFDVMDNHYVPNLTFGSMICNALRDYGIDAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +DS I +AG IITFHPE++ HI RSL+ I G K G+ +NP TP+
Sbjct: 70 DVHLMVSPVDSMIEQFLEAGASIITFHPEATNHIDRSLQMIKDGGAKCGLVLNPATPLHH 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D IL+M+VNPGFGGQ IE T+ KI+Q + I R I LEVDGGV + NI
Sbjct: 130 LDYVMDKVDQILLMSVNPGFGGQSFIEGTLDKIKQVRQRIDASGREIRLEVDGGVKASNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+++ +AGAD+ V GS+ FNQ
Sbjct: 190 RAIAEAGADMFVAGSAIFNQ 209
>gi|39936876|ref|NP_949152.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris CGA009]
gi|39650733|emb|CAE29256.1| ribulose-5-phosphate-3-epimerase [Rhodopseudomonas palustris
CGA009]
Length = 232
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 149/217 (68%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSILA+DFS+LGEE+ + AG IH DVMDG FVPNIS+G DVI+++R ++ V
Sbjct: 9 LAIAPSILASDFSKLGEEVRAVDTAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTKKV 68
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ A AGCDIIT H E+ PH+ RSL+ I A+GKK GV++NP T +
Sbjct: 69 FDAHLMIAPCDPYLEAFAKAGCDIITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTHPS 128
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E V+D+ID++L+M+VNPGFGGQ I S + KI+Q +A++ R I +EVDGGV+ +
Sbjct: 129 AIEYVLDDIDLVLVMSVNPGFGGQAFIPSAVQKIKQIRAMVAGRPIDIEVDGGVSDKVAG 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
L AGA+ V GS+ F +Y + ++ +A+
Sbjct: 189 ELAAAGANAFVAGSAVFKGGTLEAYKANIAGIRNAAM 225
>gi|229104422|ref|ZP_04235091.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-28]
gi|228679120|gb|EEL33328.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-28]
Length = 214
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNVET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|148554857|ref|YP_001262439.1| ribulose-5-phosphate 3-epimerase [Sphingomonas wittichii RW1]
gi|148500047|gb|ABQ68301.1| ribulose-5-phosphate 3-epimerase [Sphingomonas wittichii RW1]
Length = 220
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 151/221 (68%), Gaps = 3/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF++LGEE+ I AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTSPVLISPSILSADFAKLGEEVRAIDAAGADWIHVDVMDGHFVPNITIGPAVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D+ + A+AG DIIT HPE+ PH+ R+++ I +GKK GV++NP
Sbjct: 61 TTKPFDVHLMISPVDAFLEDFANAGADIITVHPEAGPHVHRTIQRIKGLGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +++++D++L+M+VNPGFGGQ IES + KI + +I K + I LEVDGGV
Sbjct: 121 TPAKMLDYILEDVDLVLVMSVNPGFGGQSFIESQLRKIEAIRKMIDKSGKDIHLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ ++ AGA LV G++ F + G YA + L+K+
Sbjct: 181 DANTAPRVIAAGATALVAGTATF-RGGPSQYAANIAGLRKA 220
>gi|30021948|ref|NP_833579.1| ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 14579]
gi|229129136|ref|ZP_04258109.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-Cer4]
gi|29897504|gb|AAP10780.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 14579]
gi|228654373|gb|EEL10238.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-Cer4]
Length = 214
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYILTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|229086413|ref|ZP_04218589.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-44]
gi|228696929|gb|EEL49738.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-44]
Length = 214
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIELIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R + +EVDGGV +
Sbjct: 122 MIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVNERDLQVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|192292706|ref|YP_001993311.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris TIE-1]
gi|192286455|gb|ACF02836.1| Ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris TIE-1]
Length = 232
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 149/217 (68%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSILA+DFS+LGEE+ + AG IH DVMDG FVPNIS+G DVI+++R ++ V
Sbjct: 9 LAIAPSILASDFSKLGEEVRAVDTAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTKKV 68
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D ++ A AGCDIIT H E+ PH+ RSL+ I A+GKK GV++NP T +
Sbjct: 69 FDAHLMIAPCDPYLEAFAKAGCDIITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTHPS 128
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E V+D+ID++L+M+VNPGFGGQ I S + KI+Q +A++ R I +EVDGGV+ +
Sbjct: 129 AIEYVLDDIDLVLVMSVNPGFGGQAFIPSAVQKIKQIRAMVAGRPIDIEVDGGVSDKVAG 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
L AGA+ V GS+ F +Y + ++ +A+
Sbjct: 189 ELAAAGANAFVAGSAVFKGGTLEAYKTNIAGIRNAAM 225
>gi|307296991|ref|ZP_07576807.1| ribulose-phosphate 3-epimerase [Sphingobium chlorophenolicum L-1]
gi|306877517|gb|EFN08745.1| ribulose-phosphate 3-epimerase [Sphingobium chlorophenolicum L-1]
Length = 220
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 151/219 (68%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+RLGEE+ I +AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTSPILISPSILSADFARLGEEVRAIDEAGADWIHIDVMDGHFVPNITIGPGVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D ++N A+AG DI+T HPE+ PHI RS++ I ++G + GV +NP
Sbjct: 61 TKKPFDVHLMISPVDQYLNAFAEAGADILTVHPEAGPHIHRSIQHIKSLGVQAGVVLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +ID++D+IL+M+VNPGFGGQ I + + KI + +I K R I L+VDGG+
Sbjct: 121 TPAKMLDYLIDDVDLILVMSVNPGFGGQSFITNQLRKIEAIRKMIEKSGRDIRLQVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++AGAD+LV G++ F + G +YA + L+
Sbjct: 181 DFTTAPLAIEAGADVLVAGTATF-RGGASAYAGNIRTLR 218
>gi|229174526|ref|ZP_04302058.1| Ribulose-phosphate 3-epimerase [Bacillus cereus MM3]
gi|228609086|gb|EEK66376.1| Ribulose-phosphate 3-epimerase [Bacillus cereus MM3]
Length = 214
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNTET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|47569486|ref|ZP_00240166.1| ribulose-phosphate 3-epimerase [Bacillus cereus G9241]
gi|47553815|gb|EAL12186.1| ribulose-phosphate 3-epimerase [Bacillus cereus G9241]
Length = 214
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV
Sbjct: 122 MIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|229162796|ref|ZP_04290753.1| Ribulose-phosphate 3-epimerase [Bacillus cereus R309803]
gi|228620678|gb|EEK77547.1| Ribulose-phosphate 3-epimerase [Bacillus cereus R309803]
Length = 214
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|148652396|ref|YP_001279489.1| ribulose-phosphate 3-epimerase [Psychrobacter sp. PRwf-1]
gi|148571480|gb|ABQ93539.1| ribulose-5-phosphate 3-epimerase [Psychrobacter sp. PRwf-1]
Length = 236
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 150/214 (70%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++FG+ + ++LR Y D+
Sbjct: 15 IAPSILSADFARLGEEVETVLQAGADVIHFDVMDNHYVPNLTFGSMICKALRDYGIDAPI 74
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +DS I ++G IITFHPE+S HI RSL+ I G K G+ +NP TP+
Sbjct: 75 DVHLMVSPVDSMIEQFLESGASIITFHPEASNHIDRSLQMIKDGGAKCGLVLNPATPLHY 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D IL+M+VNPGFGGQ I+ T+ KI+Q + I R I LEVDGGV + NI
Sbjct: 135 LDYVMDKVDQILLMSVNPGFGGQSFIDGTLDKIKQVRQRIDASGRDIRLEVDGGVKANNI 194
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+++ +AGAD+ V GS+ FNQ Y + +++++
Sbjct: 195 RAIAEAGADMFVAGSAIFNQP---DYKQAIDEMR 225
>gi|228987003|ref|ZP_04147129.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157436|ref|ZP_04285514.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 4342]
gi|228626163|gb|EEK82912.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 4342]
gi|228772781|gb|EEM21221.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 214
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIQNPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV
Sbjct: 122 MIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|229019058|ref|ZP_04175896.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1273]
gi|229025302|ref|ZP_04181721.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1272]
gi|228735993|gb|EEL86569.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1272]
gi|228742226|gb|EEL92388.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1273]
Length = 214
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 146/202 (72%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI++ ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKEVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|91976249|ref|YP_568908.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris BisB5]
gi|91682705|gb|ABE39007.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris BisB5]
Length = 232
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 146/211 (69%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEE+ + +AG IH DVMDG FVPNIS+G DVI+++R ++ VFD
Sbjct: 11 IAPSILASDFSKLGEEVRAVDQAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTKKVFD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D + A AGCDIIT H E+ PH+ RSL+ I A+GKK GV++NP T + +
Sbjct: 71 AHLMIAPCDPFLEAFAKAGCDIITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTHPSAI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D+ID++L+M+VNPGFGGQ I S + KIRQ +A++ R I +EVDGGV+ + L
Sbjct: 131 EYVLDDIDLVLVMSVNPGFGGQAFIPSAVEKIRQVRAMVAGRPIDIEVDGGVSDKVAGQL 190
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
AGA+ V GS+ F SY ++ ++
Sbjct: 191 AAAGANAFVAGSAVFKGGTVESYKANISGIR 221
>gi|27380791|ref|NP_772320.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
gi|27353956|dbj|BAC50945.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
Length = 233
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 144/210 (68%), Gaps = 1/210 (0%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
TP + I PSILA+DFSRLGEE+ + AGA IH DVMDG FVPNIS+G DVI+++R
Sbjct: 5 FTPRPLAIAPSILASDFSRLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKAMRP 64
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ VFD HLMIS D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP
Sbjct: 65 HTKKVFDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP+ +LE VID +D++L+M+VNPGFGGQ I S I KIR +A+ R I +EVDGGV
Sbjct: 125 GTPIGVLEYVIDLVDLVLVMSVNPGFGGQAFIPSAIGKIRDIRAMTAGRPIDIEVDGGVG 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+L AGA+ V G+S F + +Y
Sbjct: 185 PDVAGALAAAGANAFVAGTSVFRGGTQDAY 214
>gi|240850727|ref|YP_002972127.1| pentose (ribulose)-5-phosphate-3-epimerase Rpe [Bartonella grahamii
as4aup]
gi|240267850|gb|ACS51438.1| pentose (ribulose)-5-phosphate-3-epimerase Rpe [Bartonella grahamii
as4aup]
Length = 228
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 155/221 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS+LA+DFS+LG+E+ ++ AGA +H D+MDG FVPNI+FG +++++LR
Sbjct: 1 MPHSHLISPSLLASDFSKLGQEMLDVVDAGADWLHLDIMDGHFVPNITFGPEIVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ +D ++ A AG DIIT H E+SPH+ RSL+TI MGKK G+A+NP
Sbjct: 61 TKATFDVHLMIAPVDPYLEAFAKAGSDIITIHAEASPHLHRSLQTIKKMGKKAGIALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFGGQ I KI++ K++I R I LEVDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGGQSFIPEIKDKIKRVKSMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGITAKAGANVFVAGSAIYKNGNKELYKTRINALRQAAI 221
>gi|167636416|ref|ZP_02394715.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0442]
gi|254739853|ref|ZP_05197546.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Kruger B]
gi|167528158|gb|EDR90945.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0442]
Length = 214
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A G DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKVGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|85715582|ref|ZP_01046562.1| ribulose-phosphate 3-epimerase [Nitrobacter sp. Nb-311A]
gi|85697521|gb|EAQ35398.1| ribulose-phosphate 3-epimerase [Nitrobacter sp. Nb-311A]
Length = 233
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 146/211 (69%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEE+ + + GA+ IH DVMDG FVPNIS+G DVI+++R ++ +FD
Sbjct: 12 IAPSILASDFSKLGEEVRAVDQGGAEWIHLDVMDGHFVPNISYGPDVIKAMRPHTKKIFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AGCD IT H ES PH+ RSL+ I ++GKK GV +NP TP++ L
Sbjct: 72 AHLMIAPCDPYLEAFAKAGCDHITVHVESGPHLHRSLQAIRSLGKKAGVTLNPATPLSTL 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+M+VNPGFGGQ+ I S + KIR +++IG R I +EVDGGV L
Sbjct: 132 EYVLDMVDLVLVMSVNPGFGGQKFISSAVGKIRDLRSMIGGRPIDIEVDGGVGPDVAGDL 191
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
AGA+ V GS+ F SY ++ ++
Sbjct: 192 AAAGANAFVAGSAVFKGGTMESYKANMDAIR 222
>gi|229031490|ref|ZP_04187490.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1271]
gi|228729779|gb|EEL80759.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1271]
Length = 214
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 145/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA++LV GS+ +NQK
Sbjct: 182 ARLCIEAGANVLVAGSAVYNQK 203
>gi|115523660|ref|YP_780571.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris BisA53]
gi|115517607|gb|ABJ05591.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris
BisA53]
Length = 231
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 149/214 (69%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEE+ + +AG IH DVMDG FVPNIS+G DVI+S+R +++ VFD
Sbjct: 10 IAPSILASDFSKLGEEVRAVDQAGCDWIHLDVMDGHFVPNISYGPDVIKSMRPHTNKVFD 69
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D + A AGCDIIT H E+ PH+ RSL+ I A+GKK GV++NP T + +
Sbjct: 70 AHLMIAPCDPFLEAFAKAGCDIITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTHPSAI 129
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E VI +ID++L+M+VNPGFGGQ I S I KI+Q +A++G R I +EVDGGV+ + +L
Sbjct: 130 EYVIGDIDLVLVMSVNPGFGGQAFIPSAIEKIKQIRAMVGDRPIDIEVDGGVSDKVSGAL 189
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AGA+ V GS+ F SY + ++ +A
Sbjct: 190 AAAGANAFVAGSAVFKGGTVESYRANIEGIRNAA 223
>gi|261380240|ref|ZP_05984813.1| ribulose-phosphate 3-epimerase [Neisseria subflava NJ9703]
gi|284797097|gb|EFC52444.1| ribulose-phosphate 3-epimerase [Neisseria subflava NJ9703]
Length = 216
Score = 215 bits (548), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 143/206 (69%), Gaps = 6/206 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYATVPV 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I+ A AG +IITFHPE+S HI RSL I G + G+ +NP TPV I
Sbjct: 65 DVHLMVEPVDDLIHAFAKAGANIITFHPEASRHIDRSLGLIKEYGCQAGLVLNPATPVNI 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE+V+D++DM+L+M+VNPGFGGQ I +T+ KIR+ + ++ + R I+LEVDGGV
Sbjct: 125 LENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYERQSGRHIALEVDGGVK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKG 205
+ NI + AGAD V GS+ F Q G
Sbjct: 185 TDNIAEIAAAGADTFVAGSAIFWQTG 210
>gi|319407196|emb|CBI80835.1| ribulose-phosphate 3-epimerase [Bartonella sp. 1-1C]
Length = 224
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 153/221 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+LA+DFS+LG+E+S++ AGA IH D+MDG FVPNISFG DV+++LR
Sbjct: 1 MSRSHLIAPSLLASDFSKLGQELSDVLDAGADWIHLDIMDGHFVPNISFGPDVVKALRPQ 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFD HLMI +D ++ A AG DIIT H ESS H+ RSL+ I AM KK G+AINP
Sbjct: 61 TKAVFDVHLMIKPVDPYLESFAKAGSDIITIHAESSTHLHRSLQMIKAMDKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +LE ++D++D+ILIMTVNPGFGGQ I KI++ K +I R I LEVDGG+T
Sbjct: 121 TSEHVLEYLLDQLDLILIMTVNPGFGGQNFIPDMEDKIKRIKNMIANRPIDLEVDGGITI 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGKTAKAGANVFVAGSAIYKNGNKELYKTRINALRQAAI 221
>gi|228992588|ref|ZP_04152515.1| Ribulose-phosphate 3-epimerase [Bacillus pseudomycoides DSM 12442]
gi|228998636|ref|ZP_04158223.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides Rock3-17]
gi|229006136|ref|ZP_04163823.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides Rock1-4]
gi|228755089|gb|EEM04447.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides Rock1-4]
gi|228761104|gb|EEM10063.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides Rock3-17]
gi|228767222|gb|EEM15858.1| Ribulose-phosphate 3-epimerase [Bacillus pseudomycoides DSM 12442]
Length = 214
Score = 214 bits (546), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEVCPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+ +IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 MIEHVLGDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLQVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|15677116|ref|NP_274268.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis MC58]
gi|254805024|ref|YP_003083245.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis alpha14]
gi|304387494|ref|ZP_07369683.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis ATCC 13091]
gi|7226484|gb|AAF41625.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis MC58]
gi|254668566|emb|CBA06051.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis alpha14]
gi|254670096|emb|CBA05016.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis alpha153]
gi|254673910|emb|CBA09694.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis alpha275]
gi|304338381|gb|EFM04502.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis ATCC 13091]
gi|325128350|gb|EGC51234.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis N1568]
gi|325140526|gb|EGC63047.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis CU385]
gi|325144611|gb|EGC66910.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M01-240013]
gi|325204228|gb|ADY99681.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M01-240355]
gi|325205979|gb|ADZ01432.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M04-240196]
gi|325208184|gb|ADZ03636.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis NZ-05/33]
Length = 242
Score = 214 bits (546), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 149/227 (65%), Gaps = 16/227 (7%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 TYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ + R I++EVDGG
Sbjct: 123 YLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ----------KGEISYAKRLN 214
+ + NI ++ +AGAD V GS+ F + + E+ + RLN
Sbjct: 183 IKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLN 229
>gi|121634937|ref|YP_975182.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis FAM18]
gi|161870087|ref|YP_001599257.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis 053442]
gi|120866643|emb|CAM10394.1| putative ribulose-phosphate 3-epimerase [Neisseria meningitidis
FAM18]
gi|161595640|gb|ABX73300.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis 053442]
gi|261392494|emb|CAX50045.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase;
PPE; R5P3E) [Neisseria meningitidis 8013]
gi|308389337|gb|ADO31657.1| putative ribulose-phosphate 3-epimerase [Neisseria meningitidis
alpha710]
gi|325130309|gb|EGC53076.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis OX99.30304]
gi|325134508|gb|EGC57153.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M13399]
gi|325138345|gb|EGC60914.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis ES14902]
gi|325142485|gb|EGC64889.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis 961-5945]
gi|325198378|gb|ADY93834.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis G2136]
gi|325202062|gb|ADY97516.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M01-240149]
Length = 242
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 149/227 (65%), Gaps = 16/227 (7%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 AYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ + R I++EVDGG
Sbjct: 123 YLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ----------KGEISYAKRLN 214
+ + NI ++ +AGAD V GS+ F + + E+ + RLN
Sbjct: 183 IKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLN 229
>gi|114768780|ref|ZP_01446406.1| ribulose-phosphate 3-epimerase [alpha proteobacterium HTCC2255]
gi|114549697|gb|EAU52578.1| ribulose-phosphate 3-epimerase [alpha proteobacterium HTCC2255]
Length = 228
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 142/213 (66%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF++LG+EI+++ AGA IH D MDG FVPN++ G +V+ ++R Y +V D
Sbjct: 13 IAPSILSADFAKLGDEITSVEAAGADWIHVDPMDGHFVPNLTIGPNVVAAIRPYVKTVMD 72
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D ++ A AG DIIT H ES PH+ RSL+ I + G K GVA+N TP++++
Sbjct: 73 VHLMISPADPYLEAFAKAGSDIITVHAESGPHLDRSLQAIRSYGCKAGVALNITTPLSVI 132
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E +D+ID+ILIMT+NPGFGGQ+ S I KI A+ +IG R I LEVDGGV
Sbjct: 133 EYCLDKIDLILIMTINPGFGGQKFTYSMIDKISAARKMIGDRPIWLEVDGGVDPDTAPLC 192
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGA++LV GS+ F + Y +N +K S
Sbjct: 193 WNAGANVLVAGSAVFKDGSQEQYQDNINAIKNS 225
>gi|94498063|ref|ZP_01304626.1| Ribulose-phosphate 3-epimerase [Sphingomonas sp. SKA58]
gi|94422498|gb|EAT07536.1| Ribulose-phosphate 3-epimerase [Sphingomonas sp. SKA58]
Length = 220
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 149/219 (68%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+RLGEE+ I +AG +H DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTHPILISPSILSADFARLGEEVRAIDEAGCDWLHIDVMDGHFVPNITIGPAVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMIS +D +++ AG DIIT HPE+ PHI R+++ I ++G K GV +NP
Sbjct: 61 SQKPFDVHLMISPVDPYLDAFVQAGADIITVHPEAGPHIHRTVQHIKSLGVKAGVVLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +ID++D+IL+M+VNPGFGGQ IE+ + KI + +I K R I L+VDGG+
Sbjct: 121 TPAKMLDYLIDDVDLILVMSVNPGFGGQSFIENQLRKIEAIRKMIDKSGRDIRLQVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+LV G++ F + G+ +YA + L+
Sbjct: 181 DLNTAPRAIAAGADVLVAGTATF-RGGQSAYADNIRQLR 218
>gi|325132572|gb|EGC55265.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M6190]
gi|325136270|gb|EGC58878.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M0579]
Length = 272
Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 149/227 (65%), Gaps = 16/227 (7%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 33 AYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 92
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 93 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 152
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ + R I++EVDGG
Sbjct: 153 YLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEVDGG 212
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ----------KGEISYAKRLN 214
+ + NI ++ +AGAD V GS+ F + + E+ + RLN
Sbjct: 213 IKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLN 259
>gi|226953577|ref|ZP_03824041.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter sp. ATCC 27244]
gi|226835671|gb|EEH68054.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter sp. ATCC 27244]
Length = 228
Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++L+SY
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAHICKALKSY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE++ HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVSPVDRMIGDFLEAGADIITFHPEATEHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLDKLRQARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREVAEAGADMFVAGSAIFGQ 206
>gi|219847256|ref|YP_002461689.1| Ribulose-phosphate 3-epimerase [Chloroflexus aggregans DSM 9485]
gi|219541515|gb|ACL23253.1| Ribulose-phosphate 3-epimerase [Chloroflexus aggregans DSM 9485]
Length = 223
Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 144/203 (70%), Gaps = 3/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-- 62
+++ PSIL ADFSRLGE+++ + G IH DVMDG FVPNISFG V+RSLR +D
Sbjct: 1 MRLAPSILTADFSRLGEQVATACETGIDWIHLDVMDGQFVPNISFGPPVVRSLRPLADRY 60
Query: 63 -SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ D HLMI + ++ A AG D+IT H E++PH+ R+++ IH +GKK GVA+NP T
Sbjct: 61 GALLDAHLMIVEPERYLADFAAAGADLITVHVEATPHVHRAIQMIHDLGKKAGVALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P++++E+VID++++IL+MTVNPGFGGQ LI S + K+R+ ++G R + + VDGGV
Sbjct: 121 PLSMVEEVIDQVELILLMTVNPGFGGQTLIPSVLAKVRRLATMLGDRPVEIMVDGGVHPA 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
I + +GA + VVGS+ F ++
Sbjct: 181 TIAACAASGATVAVVGSAVFGEQ 203
>gi|163941598|ref|YP_001646482.1| ribulose-phosphate 3-epimerase [Bacillus weihenstephanensis KBAB4]
gi|229061463|ref|ZP_04198808.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH603]
gi|229134668|ref|ZP_04263477.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST196]
gi|229168600|ref|ZP_04296323.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH621]
gi|163863795|gb|ABY44854.1| Ribulose-phosphate 3-epimerase [Bacillus weihenstephanensis KBAB4]
gi|228615006|gb|EEK72108.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH621]
gi|228648714|gb|EEL04740.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST196]
gi|228717886|gb|EEL69534.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH603]
Length = 214
Score = 214 bits (545), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFSRLGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSRLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHDIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA++LV GS+ +NQK
Sbjct: 182 ARLCIEAGANVLVAGSAVYNQK 203
>gi|294788189|ref|ZP_06753432.1| ribulose-phosphate 3-epimerase [Simonsiella muelleri ATCC 29453]
gi|294483620|gb|EFG31304.1| ribulose-phosphate 3-epimerase [Simonsiella muelleri ATCC 29453]
Length = 229
Score = 214 bits (544), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 151/223 (67%), Gaps = 12/223 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDS 63
+I PS+L+ADF+RLGEE+ + AGA IHFDVMD +VPN++FGA V ++L+ Y D
Sbjct: 4 FRIAPSLLSADFARLGEEVKAVVAAGADLIHFDVMDNHYVPNLTFGAMVCQALKPYCGDI 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ D HLM+ +D I AG DIITFHPE+S H+ RSL I + GK+ G+ +NP TP+
Sbjct: 64 LMDVHLMVEPVDDLIQSFNQAGADIITFHPEASRHVDRSLSLIKSAGKQAGLVLNPATPI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI-------GKRSISLEVDG 176
++E+V+D++DM+LIM+VNPGFGGQ I +TI KI+Q K+++ GKR I +EVDG
Sbjct: 124 YVIENVLDKLDMVLIMSVNPGFGGQSFIPNTINKIKQLKSILDEYESQTGKR-IRIEVDG 182
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GV NI + AGAD V GS+ F G+ YA+ + +++
Sbjct: 183 GVKVDNIGEIAAAGADTFVAGSAIF---GQPDYAQVMEQMRQE 222
>gi|158423434|ref|YP_001524726.1| ribulose-phosphate 3-epimerase [Azorhizobium caulinodans ORS 571]
gi|158330323|dbj|BAF87808.1| ribulose-phosphate 3-epimerase [Azorhizobium caulinodans ORS 571]
Length = 226
Score = 214 bits (544), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 137/196 (69%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFSRLGEE+ ++ AGA IH DVMDG FVPNI+FG DVI++LR ++D VFD
Sbjct: 6 IAPSILASDFSRLGEEVRDVAAAGADYIHLDVMDGHFVPNITFGPDVIKALRPHTDKVFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS ++ ++ A AG DIIT E++ H+ R L+ I +GKK GVA+NP T ++L
Sbjct: 66 VHLMISPVEPYLEAFAAAGADIITVQAEATDHLDRCLQVIRGLGKKAGVALNPATHESVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++D+ID++ +MTVNPGFGGQ I +PK+ + + +I R I LE+DGGV
Sbjct: 126 TYLLDKIDLVCVMTVNPGFGGQAFIPDVLPKVERIRDMIRGRDIRLEIDGGVNPTTGALC 185
Query: 187 VQAGADLLVVGSSFFN 202
+AGAD+LV GS+ F
Sbjct: 186 AKAGADVLVAGSAVFK 201
>gi|75676403|ref|YP_318824.1| ribulose-phosphate 3-epimerase [Nitrobacter winogradskyi Nb-255]
gi|74421273|gb|ABA05472.1| ribulose-5-phosphate 3-epimerase [Nitrobacter winogradskyi Nb-255]
Length = 233
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 145/211 (68%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LG+E+ + + GA+ IH DVMDG FVPNIS+G DVI+++R +S +FD
Sbjct: 12 IAPSILASDFSKLGDEVRAVDQGGAEWIHLDVMDGHFVPNISYGPDVIKAMRPHSKKIFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D ++ A AGCD IT H E+ PH+ RSL+ I +GKK GV +NP TP++ +
Sbjct: 72 AHLMISPCDPYLEAFAKAGCDHITVHVEAGPHLHRSLQAIRNLGKKAGVTLNPGTPLSTV 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+M+VNPGFGGQ+ I S + KIR +A+IG R I +EVDGGV L
Sbjct: 132 EYVLDMVDLVLVMSVNPGFGGQKFISSAVDKIRDLRAMIGGRPIDIEVDGGVGPDVAGDL 191
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
AGA+ V GS+ F SY ++ ++
Sbjct: 192 AAAGANAFVAGSAVFKGGTMESYKANMDAIR 222
>gi|294649428|ref|ZP_06726856.1| ribulose-phosphate 3-epimerase [Acinetobacter haemolyticus ATCC
19194]
gi|292824685|gb|EFF83460.1| ribulose-phosphate 3-epimerase [Acinetobacter haemolyticus ATCC
19194]
Length = 228
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++L+SY
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAHICKALKSY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE++ HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVSPVDRMIGDFLEAGADIITFHPEATEHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLDKLRQARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREVAEAGADMFVAGSAIFGQ 206
>gi|328553525|gb|AEB24017.1| ribulose-phosphate 3-epimerase [Bacillus amyloliquefaciens TA208]
gi|328911683|gb|AEB63279.1| ribulose-5-phosphate 3-epimerase [Bacillus amyloliquefaciens LL3]
Length = 217
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 139/202 (68%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFASLGEEIKDVEKGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIENPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGIKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
I+E VIDE+D++L+MTVNPGFGGQ+ I S +PKIRQ K + ++ +S +EVDGGV
Sbjct: 122 IIEHVIDELDLVLLMTVNPGFGGQRFIHSVLPKIRQVKQMAEEKGLSELLIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
+AGA+LLV GS+ +NQ
Sbjct: 182 TAPLCAEAGANLLVAGSAVYNQ 203
>gi|296314236|ref|ZP_06864177.1| ribulose-phosphate 3-epimerase [Neisseria polysaccharea ATCC 43768]
gi|296839031|gb|EFH22969.1| ribulose-phosphate 3-epimerase [Neisseria polysaccharea ATCC 43768]
Length = 227
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 141/206 (68%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 TYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ R I++EVDGG
Sbjct: 123 YLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDCYEEKSGRRIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI ++ +AGAD V GS+ F +
Sbjct: 183 IKTDNIAAVARAGADTFVAGSAIFGK 208
>gi|149185151|ref|ZP_01863468.1| Ribulose-phosphate 3-epimerase [Erythrobacter sp. SD-21]
gi|148831262|gb|EDL49696.1| Ribulose-phosphate 3-epimerase [Erythrobacter sp. SD-21]
Length = 220
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 145/213 (68%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE+ + +AGA IH DVMDG +VPNI+ G V+++LR ++ FD
Sbjct: 6 ISPSILSADFARLGEEVRAVDEAGADWIHIDVMDGHYVPNITIGPAVVKALRPHTKKPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +D ++ A+AG DIIT HPE+ PHI R+L+ I +GK+ GV +NP TP +L
Sbjct: 66 VHLMIEPVDPYLEAFAEAGADIITVHPEAGPHIHRTLQAIKNLGKQAGVVLNPGTPAKML 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+ +I+E+D++L+M+VNPGFGGQ I S + KI + +I + + I LEVDGGV
Sbjct: 126 DYLIEEVDLVLVMSVNPGFGGQSFIHSQLRKIEAIRKMIDQCGKDIRLEVDGGVDPTTAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V+AGAD+LV GS+ F + G YA + LK
Sbjct: 186 LCVEAGADVLVAGSATF-RGGPEKYASNIAALK 217
>gi|163848736|ref|YP_001636780.1| ribulose-phosphate 3-epimerase [Chloroflexus aurantiacus J-10-fl]
gi|222526682|ref|YP_002571153.1| Ribulose-phosphate 3-epimerase [Chloroflexus sp. Y-400-fl]
gi|163670025|gb|ABY36391.1| Ribulose-phosphate 3-epimerase [Chloroflexus aurantiacus J-10-fl]
gi|222450561|gb|ACM54827.1| Ribulose-phosphate 3-epimerase [Chloroflexus sp. Y-400-fl]
Length = 223
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 144/203 (70%), Gaps = 3/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-- 62
+++ PSIL ADF+RLGE+++ AG IH DVMDG FVPNISFG V+R+LR +D
Sbjct: 1 MRLAPSILTADFARLGEQVATACAAGIDWIHLDVMDGRFVPNISFGPLVVRALRPLADQY 60
Query: 63 -SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ D HLMI + ++ A AG D+IT H E++PH+ R+++ IH +GKK GVAINP T
Sbjct: 61 GALLDAHLMIVEPERYLADFAAAGADLITVHAEATPHVHRAVQMIHNLGKKAGVAINPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P++++E++ID++++IL+MTVNPGFGGQ LI S + K+++ + L+G R + + VDGGV
Sbjct: 121 PLSMVEELIDQVELILLMTVNPGFGGQTLIPSVLAKVQRLRTLLGDRPVEIMVDGGVNPT 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
I + AGA + VVGS+ F +
Sbjct: 181 TIAACATAGATVAVVGSAVFGPQ 203
>gi|77917856|ref|YP_355671.1| ribulose-phosphate 3-epimerase [Pelobacter carbinolicus DSM 2380]
gi|77543939|gb|ABA87501.1| ribulose-5-phosphate 3-epimerase [Pelobacter carbinolicus DSM 2380]
Length = 221
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 148/218 (67%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFSRLGEEI+ I K GA +H DVMDG FVPNI+ G V+ + R +D
Sbjct: 2 IKIAPSILSADFSRLGEEIAAIDKGGADYVHIDVMDGHFVPNITIGPLVVEAARRVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DIIT H E+ PH+ R+++ IH++GKK GV+INP TP+
Sbjct: 62 LDVHLMIENPDRYIPDFAKAGADIITVHYEAVPHLHRTVQLIHSLGKKAGVSINPATPIN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
L+ +++E++++LIM+VNPGFGGQQ I + +PKI + I +R S+ LEVDGGV N
Sbjct: 122 CLDVILEELELVLIMSVNPGFGGQQFIPACLPKIEALRNTIERRGLSVELEVDGGVKLDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + AGA ++V GS+ + G YA + LK +A
Sbjct: 182 IARIAGAGAQVMVAGSAVY---GTDDYAATIASLKTAA 216
>gi|50083912|ref|YP_045422.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter sp. ADP1]
gi|49529888|emb|CAG67600.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter sp. ADP1]
Length = 228
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 150/220 (68%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + +AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVERVLEAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I DAG DIITFHPE++ HI RSL+ I A G K G+ NP
Sbjct: 61 GIQAPIDVHLMVSPVDRMIGDFLDAGADIITFHPEATDHIDRSLQLIKAGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ +I I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLRQARKMIDASGLDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI+ + +AGAD+ V GS+ F G+ Y +++++
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIF---GKPDYKAVIDEMR 217
>gi|229013044|ref|ZP_04170209.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides DSM 2048]
gi|228748298|gb|EEL98158.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides DSM 2048]
Length = 214
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFSRLGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSRLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHDIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQIAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA++LV GS+ +NQK
Sbjct: 182 ARLCIEAGANVLVAGSAVYNQK 203
>gi|93006818|ref|YP_581255.1| ribulose-phosphate 3-epimerase [Psychrobacter cryohalolentis K5]
gi|92394496|gb|ABE75771.1| ribulose-5-phosphate 3-epimerase [Psychrobacter cryohalolentis K5]
Length = 229
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 143/201 (71%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF++LGEE+ + +GA IHFDVMD +VPN++FG+ + ++LR Y D+
Sbjct: 10 IAPSILSADFAKLGEEVERVLASGADVIHFDVMDNHYVPNLTFGSMICKALRDYGIDAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +DS I +AG IITFHPE+S HI RSL+ I G + G+ +NP TP+
Sbjct: 70 DVHLMVSPVDSMIEQFLEAGASIITFHPEASSHIDRSLQLIKDGGAECGLVLNPATPLHY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D +L+M+VNPG+GGQ IE T+ K+RQ + I R I LEVDGG+ + NI
Sbjct: 130 LDYVMDKVDQVLLMSVNPGYGGQSFIEGTLEKVRQVRQRIITSGRDIRLEVDGGIKASNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+++ +AGAD+ V GS+ FNQ+
Sbjct: 190 RAIAEAGADMFVAGSAIFNQE 210
>gi|325265994|ref|ZP_08132680.1| ribulose-phosphate 3-epimerase [Kingella denitrificans ATCC 33394]
gi|324982632|gb|EGC18258.1| ribulose-phosphate 3-epimerase [Kingella denitrificans ATCC 33394]
Length = 225
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 140/206 (67%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ + AGA IHFDVMD +VPN++FG + ++LR S
Sbjct: 2 NYRIAPSILSADFTRLGEEVRRVIDAGADLIHFDVMDNHYVPNLTFGPMICQALRPVSTV 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I +AG DII+FHPE+S HI RSL+ I GK+ G+ +NP TPV
Sbjct: 62 PIDVHLMVEPVDDMIRAFIEAGADIISFHPEASRHIDRSLQLIKNAGKQAGLVLNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+LE V+D++DM+L+M+VNPGFGGQ I T+ K+R+ ++L+ R I LEVDGG
Sbjct: 122 HVLEHVLDKLDMVLLMSVNPGFGGQSFIPHTLDKLRRVRSLLDHYQAQTGRRIVLEVDGG 181
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V + NI + QAGAD V GS+ F Q
Sbjct: 182 VKAGNIAEIAQAGADTFVAGSAIFGQ 207
>gi|308173542|ref|YP_003920247.1| ribulose-5-phosphate 3-epimerase [Bacillus amyloliquefaciens DSM 7]
gi|307606406|emb|CBI42777.1| ribulose-5-phosphate 3-epimerase [Bacillus amyloliquefaciens DSM 7]
Length = 217
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 139/202 (68%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFASLGEEIKDVEKGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIENPDRYIPSFAKAGADILSVHAEACPHLHRTIQLIKEQGIKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
I+E VIDE+D++L+MTVNPGFGGQ+ I S +PKIRQ K + ++ +S +EVDGGV
Sbjct: 122 IIEHVIDELDLVLLMTVNPGFGGQRFIHSVLPKIRQVKQMAEEKGLSELLIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
+AGA+LLV GS+ +NQ
Sbjct: 182 TAPLCAEAGANLLVAGSAVYNQ 203
>gi|262373406|ref|ZP_06066685.1| ribulose-phosphate 3-epimerase [Acinetobacter junii SH205]
gi|262313431|gb|EEY94516.1| ribulose-phosphate 3-epimerase [Acinetobacter junii SH205]
Length = 228
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAGICKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE++ HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVSPVDRMIGDFLEAGADIITFHPEATDHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLRQARQIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|148259838|ref|YP_001233965.1| ribulose-phosphate 3-epimerase [Acidiphilium cryptum JF-5]
gi|146401519|gb|ABQ30046.1| ribulose-5-phosphate 3-epimerase [Acidiphilium cryptum JF-5]
Length = 225
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 147/217 (67%), Gaps = 1/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ LG E + +AGA +H DVMDG FVPN++FG VI ++R + D+VFD
Sbjct: 9 IAPSILSADFATLGAEARAVIEAGADWVHIDVMDGHFVPNLTFGPPVIGAVRKHVDAVFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D I+ +AG DIIT H E+ PH+ R++++I A G + GVA+ P TP A L
Sbjct: 69 VHLMIAPVDPFIDAFVEAGADIITVHAEACPHLDRTVQSIRARGCRAGVALCPATPEAAL 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
V+D +D++L+MTVNPGFGGQ + S +PKIR+ + +I R I LE+DGG+T
Sbjct: 129 SYVLDAVDLVLVMTVNPGFGGQTFLRSQLPKIRRIREMIAGRDIRLELDGGITPETAPDA 188
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V AGAD+LV GSS F + G +YA + L+ +A+
Sbjct: 189 VAAGADVLVAGSSVF-RGGRAAYAANIAALRAGGMAL 224
>gi|326386181|ref|ZP_08207805.1| ribulose-5-phosphate 3-epimerase [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209406|gb|EGD60199.1| ribulose-5-phosphate 3-epimerase [Novosphingobium nitrogenifigens
DSM 19370]
Length = 220
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 146/213 (68%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE+ I AGA IH DVMDG FVPNI+ G V+++LR ++ FD
Sbjct: 6 ISPSILSADFARLGEEVRAIDAAGADWIHVDVMDGHFVPNITIGPAVVKALRPHTTKPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS +D+++ A AG DIIT HPE+ PH R+++ I A+GKK GV++NP TP +L
Sbjct: 66 VHLMISPVDTYLEAFAAAGADIITVHPEAGPHTHRTVQAIKALGKKAGVSLNPATPAKML 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+ +IDEID++LIM+VNPGFGGQ I S + KI + +I K R I LEVDGGV
Sbjct: 126 DYLIDEIDLVLIMSVNPGFGGQSFISSQLRKIEAVRKMIDKTGRDIHLEVDGGVDQTTAA 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + AGAD+LV G++ F + G YA + LK
Sbjct: 186 ACIAAGADVLVAGTASF-RGGPDHYAANIAALK 217
>gi|304320156|ref|YP_003853799.1| ribulose-phosphate 3-epimerase [Parvularcula bermudensis HTCC2503]
gi|303299059|gb|ADM08658.1| ribulose-phosphate 3-epimerase [Parvularcula bermudensis HTCC2503]
Length = 245
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 150/219 (68%), Gaps = 3/219 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ I PSIL+ADF++LG+E+ IT+AGA IH DVMDG FVPNI+ G V+++LR +S
Sbjct: 23 PTPLISPSILSADFAQLGQEVRAITEAGADMIHVDVMDGHFVPNITIGPSVVKALRPHSS 82
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI+ +D ++ A AG I++ HPE+ PH+ RSL+TI +G K G+A+NP TP
Sbjct: 83 LPFDVHLMIAPVDPYLEAFAKAGASILSIHPEAGPHLHRSLQTIRQLGVKPGLALNPATP 142
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ + V+DEID+IL+M+VNPGFGGQ+ I+ + +I + + ++ R I++EVDGG+T
Sbjct: 143 LETVTPVLDEIDLILVMSVNPGFGGQKFIDGQLARIERLRRMVDATGRDITIEVDGGITP 202
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ ++ AGA LV G++ F + G SY + LK +
Sbjct: 203 ETARRVLDAGATALVAGTAVF-KDGPDSYRANIAALKAA 240
>gi|330505247|ref|YP_004382116.1| ribulose-phosphate 3-epimerase [Pseudomonas mendocina NK-01]
gi|328919533|gb|AEB60364.1| ribulose-phosphate 3-epimerase [Pseudomonas mendocina NK-01]
Length = 224
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 141/206 (68%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG ITFHPE+S HI RSL+ I A G K G+ NP
Sbjct: 60 GITAPIDAHLMVKPVDRIIGDFIEAGASYITFHPEASEHIDRSLQLIKAGGAKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMILLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V +NI+ + +AGAD V GS+ FNQ
Sbjct: 180 VNVQNIREIAEAGADTFVAGSAIFNQ 205
>gi|298368829|ref|ZP_06980147.1| ribulose-phosphate 3-epimerase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282832|gb|EFI24319.1| ribulose-phosphate 3-epimerase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 225
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 148/221 (66%), Gaps = 9/221 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF++LGEE+SN+ AGA IHFDVMD +VPN++ G V +++ Y+
Sbjct: 3 TFRIAPSILSADFAKLGEEVSNVIGAGADLIHFDVMDNHYVPNLTIGPMVCSAIKPYATV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I AG DIITFHPE+S HI RSL + +MG + G+ +NP TPV
Sbjct: 63 PVDVHLMVEPVDDLIQSFGKAGADIITFHPEASKHIDRSLSLVKSMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
++E+V+D++DM+L+M+VNPGFGGQ I T+ KIRQ + ++ R I+LEVDGG
Sbjct: 123 NLIENVLDKLDMVLLMSVNPGFGGQSFIPHTLIKIRQVRGMLDNYESQTGRRIALEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + NI + AGAD V GS+ F+Q Y +++++K
Sbjct: 183 IKTGNIAEVAAAGADTFVAGSAIFSQP---DYKAVIDEMRK 220
>gi|307300212|ref|ZP_07579997.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti BL225C]
gi|306905101|gb|EFN35684.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti BL225C]
Length = 228
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 143/203 (70%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+FG VI++LR +D VFD
Sbjct: 7 IAPSVLSADFSRLGEEVEAVCRAGADWIHLDVMDGHFVPNITFGPPVIKALRDRTDKVFD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI ++ A AGCDIIT H E++ H+ RSL+ I +G K GV++NP TP +++
Sbjct: 67 CHLMIEPPTPYLGAFACAGCDIITVHAEATTHLDRSLQAIRDVGCKAGVSLNPSTPESVI 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+MTVNPGFGGQ I + + K+R+ K++IG R I +E+DGGVT +
Sbjct: 127 EYVLDRLDLVLLMTVNPGFGGQDFIPAVVDKVRRVKSMIGGRPIHIEIDGGVTPETAPLV 186
Query: 187 VQAGADLLVVGSSFFNQKGEISY 209
AGAD+LV GS+ F E Y
Sbjct: 187 AAAGADVLVAGSAVFKGGSEEHY 209
>gi|146309013|ref|YP_001189478.1| ribulose-phosphate 3-epimerase [Pseudomonas mendocina ymp]
gi|145577214|gb|ABP86746.1| ribulose-5-phosphate 3-epimerase [Pseudomonas mendocina ymp]
Length = 224
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 141/206 (68%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG ITFHPE+S HI RSL+ I A G K G+ NP
Sbjct: 60 GITAPIDAHLMVKPVDRIIGDFIEAGASYITFHPEASEHIDRSLQLIKAGGAKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMILLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V +NI+ + +AGAD V GS+ FNQ
Sbjct: 180 VNVQNIREIAEAGADTFVAGSAIFNQ 205
>gi|319638450|ref|ZP_07993212.1| ribulose-phosphate 3-epimerase [Neisseria mucosa C102]
gi|317400199|gb|EFV80858.1| ribulose-phosphate 3-epimerase [Neisseria mucosa C102]
Length = 226
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 9/220 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYATVPV 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I+ A AG +IITFHPE+S H+ RSL I G + G+ +NP TPV I
Sbjct: 65 DVHLMVEPVDDLIHAFAKAGANIITFHPEASRHVDRSLGLIKEYGCQAGLVLNPATPVNI 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE+V+D++DM+L+M+VNPGFGGQ I +T+ KIR+ + ++ + R I+LEVDGGV
Sbjct: 125 LENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYEWQSGRHIALEVDGGVK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + AGAD V GS+ F G+ Y ++++++
Sbjct: 185 TDNIAEIAAAGADTFVAGSAIF---GKPDYKAVIDEMRQQ 221
>gi|241758781|ref|ZP_04756894.1| ribulose-phosphate 3-epimerase [Neisseria flavescens SK114]
gi|241320989|gb|EER57202.1| ribulose-phosphate 3-epimerase [Neisseria flavescens SK114]
Length = 226
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 9/220 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYATVPV 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I+ A AG +IITFHPE+S H+ RSL I G + G+ +NP TPV I
Sbjct: 65 DVHLMVEPVDDLIHAFAKAGANIITFHPEASRHVDRSLGLIKEYGCQAGLVLNPATPVNI 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE+V+D++DM+L+M+VNPGFGGQ I +T+ KIR+ + ++ + R I+LEVDGGV
Sbjct: 125 LENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYERQNGRHIALEVDGGVK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + AGAD V GS+ F G+ Y ++++++
Sbjct: 185 TDNIAEIAAAGADTFVAGSAIF---GKPDYKAVIDEMRQQ 221
>gi|254448929|ref|ZP_05062384.1| ribulose-phosphate 3-epimerase [gamma proteobacterium HTCC5015]
gi|198261466|gb|EDY85756.1| ribulose-phosphate 3-epimerase [gamma proteobacterium HTCC5015]
Length = 224
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 149/227 (65%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKQPYKIAPSILSADLARLGEDVDRVLAAGADIVHFDVMDNHYVPNLTFGPSVCQALRDY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G ++G+ NP
Sbjct: 61 GITAPIDAHLMVKPVDDLIPAFAKAGADFITFHPEASEHIDRSLQLIKDSGCQSGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++DMIL+M+VNPG+GGQ I T+ K+R+A+ALI + R I LE+DGG
Sbjct: 121 ATPLDYLKHVLDKVDMILLMSVNPGYGGQSFIPGTLDKLREARALIDESGRDIRLEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V + NI+ + +AGAD V GS+ FN SY + + ++K +D
Sbjct: 181 VKTDNIREIAEAGADTFVAGSAIFNAP---SYEEAIAQMRKELAGVD 224
>gi|225075156|ref|ZP_03718355.1| hypothetical protein NEIFLAOT_00156 [Neisseria flavescens
NRL30031/H210]
gi|224953331|gb|EEG34540.1| hypothetical protein NEIFLAOT_00156 [Neisseria flavescens
NRL30031/H210]
Length = 226
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 9/220 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYATVPV 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I+ A AG +IITFHPE+S H+ RSL I G + G+ +NP TPV I
Sbjct: 65 DVHLMVEPVDDLIHAFAKAGANIITFHPEASRHVDRSLGLIKEYGCQAGLVLNPATPVNI 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE+V+D++DM+L+M+VNPGFGGQ I +T+ KIR+ + ++ + R I+LEVDGGV
Sbjct: 125 LENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYERQSGRHIALEVDGGVK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + AGAD V GS+ F G+ Y ++++++
Sbjct: 185 TDNIAEIAAAGADTFVAGSAIF---GKPDYKAVIDEMRQQ 221
>gi|260426049|ref|ZP_05780028.1| ribulose-phosphate 3-epimerase [Citreicella sp. SE45]
gi|260420541|gb|EEX13792.1| ribulose-phosphate 3-epimerase [Citreicella sp. SE45]
Length = 233
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 134/199 (67%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G EI I K GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 SIKIAPSILSADFANFGAEIRAIEKQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ +D +I A+AG D+IT H E+ PHI R+L+ I A G K GV +NP TP
Sbjct: 66 FMDVHLMIAPVDPYIEAYAEAGADMITAHIEAGPHIHRTLQAIRAQGVKAGVVLNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
DV+D DM+LIMTVNPGFGGQ+ I S + K R+ + +IG R I +++DGG+T
Sbjct: 126 EACADVLDLCDMVLIMTVNPGFGGQKFIHSGVEKTRKVRQMIGDRPIHIQIDGGITPETA 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
+V+AGAD+LV GS+ F
Sbjct: 186 PLVVEAGADVLVAGSAVFK 204
>gi|71066270|ref|YP_264997.1| ribulose-5-phosphate 3-epimerase [Psychrobacter arcticus 273-4]
gi|71039255|gb|AAZ19563.1| ribulose-5-phosphate 3-epimerase [Psychrobacter arcticus 273-4]
Length = 229
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 143/201 (71%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF++LGEE+ + +GA IHFDVMD +VPN++FG+ + ++LR Y ++
Sbjct: 10 IAPSILSADFAKLGEEVERVLASGADVIHFDVMDNHYVPNLTFGSMICKALRDYGIEAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +DS I +AG IITFHPE+S HI RSL+ I G + G+ +NP TP+
Sbjct: 70 DVHLMVSPVDSMIEQFLEAGASIITFHPEASSHIDRSLQLIKDGGAECGLVLNPATPLHY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D IL+M+VNPG+GGQ IE T+ K+RQ + I R I LEVDGG+ + NI
Sbjct: 130 LDYVMDKVDQILLMSVNPGYGGQSFIEGTLEKVRQVRQRIITSGREIRLEVDGGIKASNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+++ +AGAD+ V GS+ FNQ+
Sbjct: 190 RAIAEAGADMFVAGSAIFNQE 210
>gi|117926923|ref|YP_867540.1| ribulose-5-phosphate 3-epimerase [Magnetococcus sp. MC-1]
gi|117610679|gb|ABK46134.1| ribulose-5-phosphate 3-epimerase [Magnetococcus sp. MC-1]
Length = 224
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/201 (50%), Positives = 139/201 (69%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RLGEEI + AGA IH DVMDG FVPN++ G V+ S+R +
Sbjct: 2 IKIAPSILSADFARLGEEIRMVEAAGADYIHVDVMDGHFVPNLTMGPPVVASIRKVATKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMIS +D +I A AG DIIT H E++ H+ R+L I GKK GV+INP TPV+
Sbjct: 62 LDVHLMISPVDPYIEAFAQAGSDIITVHAEATHHLDRTLNLIKEYGKKAGVSINPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+E+V+ +DM+L+M+VNPGFGGQ I ++ K+RQ + +I + R I L+VDGGV N
Sbjct: 122 AIENVMHLVDMVLVMSVNPGFGGQSFIPHSLNKVRQVREMINRQDRPIELQVDGGVKPDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
I + +AGA++ V GS+ F+Q
Sbjct: 182 IAKIAEAGANVFVAGSAIFSQ 202
>gi|299771480|ref|YP_003733506.1| ribulose-phosphate 3-epimerase [Acinetobacter sp. DR1]
gi|298701568|gb|ADI92133.1| ribulose-phosphate 3-epimerase [Acinetobacter sp. DR1]
Length = 228
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D ILIM+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILIMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|228940948|ref|ZP_04103507.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973877|ref|ZP_04134453.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980467|ref|ZP_04140777.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis Bt407]
gi|228779287|gb|EEM27544.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis Bt407]
gi|228785902|gb|EEM33905.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818784|gb|EEM64850.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941629|gb|AEA17525.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 214
Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I AG DIIT H E+ H+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFTQAGADIITVHVEACQHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQK
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQK 203
>gi|209884603|ref|YP_002288460.1| ribulose-phosphate 3-epimerase [Oligotropha carboxidovorans OM5]
gi|209872799|gb|ACI92595.1| ribulose-phosphate 3-epimerase [Oligotropha carboxidovorans OM5]
Length = 233
Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 136/196 (69%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+D++RLGEE+ AGA +H DVMDG FVPNIS+G DVI+++R +S+ +FD
Sbjct: 12 IAPSILASDYARLGEEVRAADTAGADWLHLDVMDGHFVPNISYGPDVIKAMRPHSNKIFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GVA+NP TP +
Sbjct: 72 AHLMIAPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVALNPATPANAI 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+M+VNPGFGGQ I + + KI +A+ R I + VDGGVT+ N +
Sbjct: 132 EYVLDLVDIVLVMSVNPGFGGQSFIPTVLEKITTIRAMCAGRPIDITVDGGVTADNAAQI 191
Query: 187 VQAGADLLVVGSSFFN 202
AG + LV GS+ F
Sbjct: 192 AAAGGNALVAGSAVFK 207
>gi|293609196|ref|ZP_06691499.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829769|gb|EFF88131.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 228
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D ILIM+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILIMSVNPGFGGQKFIPMTLEKLREARKVIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|307244455|ref|ZP_07526564.1| ribulose-phosphate 3-epimerase [Peptostreptococcus stomatis DSM
17678]
gi|306492148|gb|EFM64192.1| ribulose-phosphate 3-epimerase [Peptostreptococcus stomatis DSM
17678]
Length = 218
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 151/217 (69%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF+RL E + AG + +H DVMDG FVPNI+FGA +I+SLR + V
Sbjct: 1 MKLAPSVLSADFARLLESCKKVEAAGCEYLHLDVMDGHFVPNITFGAPIIKSLRKDLNMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS D + +A AGCDIIT H E+ H+ R+++ I + G K GV +NP TPV
Sbjct: 61 FDAHLMISDPDKFLPDLAAAGCDIITVHYETCTHLHRTIQNIKSHGIKAGVVLNPATPVC 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ V+ ++DM+L+M+VNPGFGGQ+ I + K+++ + +I + I +EVDGGVTS N
Sbjct: 121 MIKHVLGDLDMVLLMSVNPGFGGQKFIPEVLDKVKELRKMIDDKGLDIEIEVDGGVTSEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
IK+LV AGAD+LV GS+ F G+ K + DL+K+
Sbjct: 181 IKALVDAGADVLVAGSAIF---GKEDIDKAVMDLRKA 214
>gi|113460321|ref|YP_718382.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 129PT]
gi|170718563|ref|YP_001783397.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
gi|112822364|gb|ABI24453.1| ribulose-5-phosphate 3-epimerase [Haemophilus somnus 129PT]
gi|168826692|gb|ACA32063.1| Ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
Length = 228
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 151/222 (68%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + I PSIL+A+ +RLGE++ N+ K+GA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 1 MTPYL-IAPSILSANLARLGEDVENVLKSGADVIHFDVMDNHYVPNLTFGPAICKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GIKAPIDVHLMVKPVDRIIPDFAKAGADYITFHPEASEHIDRSLQLIRDCGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP++ L+ V+D+ID+IL+M+VNPGFGGQ I ST+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKIDVILLMSVNPGFGGQAFIPSTLEKLKQARKIIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI + QAGAD+ V GS+ F+Q Y K ++++++
Sbjct: 180 VKVNNIAEIAQAGADMFVAGSAIFDQP---DYKKVIDEMRQQ 218
>gi|16263936|ref|NP_436728.1| putative pentose-5-phosphate-3-epimerase protein [Sinorhizobium
meliloti 1021]
gi|307316435|ref|ZP_07595878.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti AK83]
gi|15140060|emb|CAC48588.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti 1021]
gi|306897633|gb|EFN28376.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti AK83]
Length = 228
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 143/203 (70%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+FG VI++LR +D VFD
Sbjct: 7 IAPSVLSADFSRLGEEVEAVCRAGADWIHLDVMDGHFVPNITFGPPVIKALRDRTDKVFD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI ++ A AGCDIIT H E++ H+ RSL+ I +G K GV++NP TP +++
Sbjct: 67 CHLMIEPPTPYLGAFACAGCDIITVHAEATTHLDRSLQAIRDVGCKAGVSLNPSTPESVI 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+MTVNPGFGGQ I + + K+R+ +++IG R I +E+DGGVT +
Sbjct: 127 EYVLDRLDLVLLMTVNPGFGGQDFIPAVVDKVRRVRSMIGGRPIHIEIDGGVTPETAPLV 186
Query: 187 VQAGADLLVVGSSFFNQKGEISY 209
AGAD+LV GS+ F E Y
Sbjct: 187 AAAGADVLVAGSAVFKGGSEEHY 209
>gi|169634258|ref|YP_001707994.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii SDF]
gi|169153050|emb|CAP02113.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii]
Length = 228
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDHVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|262281470|ref|ZP_06059250.1| ribulose-phosphate 3-epimerase [Acinetobacter calcoaceticus
RUH2202]
gi|262257058|gb|EEY75796.1| ribulose-phosphate 3-epimerase [Acinetobacter calcoaceticus
RUH2202]
Length = 228
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGICKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D ILIM+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILIMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|193076498|gb|ABO11149.2| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii ATCC
17978]
Length = 228
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|260555604|ref|ZP_05827824.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii ATCC 19606]
gi|260410515|gb|EEX03813.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii ATCC 19606]
Length = 228
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASYHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|260553838|ref|ZP_05826107.1| ribulose-phosphate 3-epimerase [Acinetobacter sp. RUH2624]
gi|260405048|gb|EEW98549.1| ribulose-phosphate 3-epimerase [Acinetobacter sp. RUH2624]
Length = 228
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 142/206 (68%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L+ Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKKY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GVKAPIDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|310659151|ref|YP_003936872.1| d-ribulose-5-phosphate 3-epimerase [Clostridium sticklandii DSM
519]
gi|308825929|emb|CBH21967.1| D-ribulose-5-phosphate 3-epimerase [Clostridium sticklandii]
Length = 218
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 143/199 (71%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADFS L +I + AG + +H DVMDG FVPNI+ G VI +L+ D V
Sbjct: 2 IKLAPSILSADFSNLLSDIKVVEDAGCEYLHIDVMDGHFVPNITIGPPVINALKGKIDMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I +DAG D+I H E+ H+ R++++I A+GKK GVA+NP TP+
Sbjct: 62 FDVHLMIENPDKYIEAFSDAGADLIVVHQEACTHLHRTIQSIKALGKKAGVALNPATPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ +I +IDM+LIMTVNPGFGGQ+ IES IPKI++ K+L K +I ++VDGG+T N
Sbjct: 122 TIKHIIHDIDMVLIMTVNPGFGGQKFIESMIPKIKELKSLCLKENVNIDIQVDGGITPEN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
+K +V AGA+++V GS+ F
Sbjct: 182 VKKVVSAGANIIVAGSAIF 200
>gi|326203172|ref|ZP_08193038.1| ribulose-phosphate 3-epimerase [Clostridium papyrosolvens DSM 2782]
gi|325986818|gb|EGD47648.1| ribulose-phosphate 3-epimerase [Clostridium papyrosolvens DSM 2782]
Length = 222
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 147/221 (66%), Gaps = 4/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS LG EI I K GA IH DVMDG FVPNI+ G V++ LR Y+
Sbjct: 2 IKIAPSILSADFSCLGSEIEKIDKNGADIIHIDVMDGHFVPNITIGPGVVKCLRKYTQKT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS+ D +I A AG DIIT H E++ H+ R+++ I GKK GVA+NP TP+
Sbjct: 62 FDVHLMISNPDEYIEQFAQAGADIITVHAEATKHLNRTIQLIKNCGKKAGVALNPATPLT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+ V+ ++DM+LIMTVNPGFGGQ + + KI K ++ + ++ +EVDGG+ + N
Sbjct: 122 VLDFVLQDVDMVLIMTVNPGFGGQSYLPQSTKKISDLKNMMIRNTLVADIEVDGGIDANN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK--GEISYAKRLNDLKKSAL 221
I + +AGA+++V GS+ F Q GE +LN +SAL
Sbjct: 182 INIVTKAGANVIVAGSAVFKQDDVGEAIRGLKLNSYNRSAL 222
>gi|169797103|ref|YP_001714896.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii AYE]
gi|184156969|ref|YP_001845308.1| Pentose-5-phosphate-3-epimerase [Acinetobacter baumannii ACICU]
gi|213156490|ref|YP_002318151.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB0057]
gi|215484566|ref|YP_002326801.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB307-0294]
gi|239501362|ref|ZP_04660672.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB900]
gi|301345564|ref|ZP_07226305.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB056]
gi|301512153|ref|ZP_07237390.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB058]
gi|301596807|ref|ZP_07241815.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB059]
gi|332875807|ref|ZP_08443602.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6014059]
gi|169150030|emb|CAM87924.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii AYE]
gi|183208563|gb|ACC55961.1| Pentose-5-phosphate-3-epimerase [Acinetobacter baumannii ACICU]
gi|213055650|gb|ACJ40552.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB0057]
gi|213987232|gb|ACJ57531.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB307-0294]
gi|322506866|gb|ADX02320.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii 1656-2]
gi|323516736|gb|ADX91117.1| Pentose-5-phosphate-3-epimerase [Acinetobacter baumannii
TCDC-AB0715]
gi|325124617|gb|ADY84140.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter calcoaceticus
PHEA-2]
gi|332735987|gb|EGJ67019.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6014059]
Length = 228
Score = 211 bits (537), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|326403234|ref|YP_004283315.1| ribulose-5-phosphate 3-epimerase [Acidiphilium multivorum AIU301]
gi|325050095|dbj|BAJ80433.1| ribulose-5-phosphate 3-epimerase [Acidiphilium multivorum AIU301]
Length = 225
Score = 211 bits (537), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 147/219 (67%), Gaps = 1/219 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ LG E + +AGA +H DVMDG FVPN++FG VI ++R + D+V
Sbjct: 7 LLIAPSILSADFATLGAEARAVIEAGADWVHIDVMDGHFVPNLTFGPPVIGAVRKHVDAV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ +D I+ +AG DIIT H E+ PH+ R++++I A G GVA+ P TP A
Sbjct: 67 FDVHLMIAPVDPFIDAFVEAGADIITVHAEACPHLDRTVQSIRARGCLAGVALCPATPEA 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L V+D +D++L+MTVNPGFGGQ + S +PKIR+ + +I R I LE+DGG+T
Sbjct: 127 ALSYVLDAVDLVLVMTVNPGFGGQTFLRSQLPKIRRIREMIAGRDIRLELDGGITPETAP 186
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V AGAD+LV GSS F + G +YA + L+ +A+
Sbjct: 187 DAVAAGADVLVAGSSVF-RGGRAAYAANIAALRAGGMAL 224
>gi|114763378|ref|ZP_01442785.1| ribulose-phosphate 3-epimerase [Pelagibaca bermudensis HTCC2601]
gi|114543916|gb|EAU46927.1| ribulose-phosphate 3-epimerase [Roseovarius sp. HTCC2601]
Length = 233
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 145/221 (65%), Gaps = 5/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 SIKIAPSILSADFANFGAEIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ +D +I A+AG D+IT H E+ PHI R+L+ I A G K GV +NP TP
Sbjct: 66 FMDVHLMIAPVDPYIEAYAEAGADMITAHVEAGPHIHRTLQAIRAQGVKAGVVLNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ DV+D DM+LIMTVNPGFGGQ+ I S + K R+ + +IG R I +++DGG+T
Sbjct: 126 DAVADVLDLCDMVLIMTVNPGFGGQKFIHSGVEKTRKIRHMIGDRPIHIQIDGGITPETA 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+V+AGAD+LV GS+ F + G + Y + + ++++A
Sbjct: 186 PLVVEAGADVLVAGSAVF-KGGSVDTPEVYGQNMRAIREAA 225
>gi|262369161|ref|ZP_06062490.1| ribulose-phosphate 3-epimerase [Acinetobacter johnsonii SH046]
gi|262316839|gb|EEY97877.1| ribulose-phosphate 3-epimerase [Acinetobacter johnsonii SH046]
Length = 228
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 151/220 (68%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ ++ AGA +HFDVMD +VPN++FGA + ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVEHVLAAGADVVHFDVMDNHYVPNLTFGAGICKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVKPVDRMIGDFLEAGADIITFHPEASDHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLDKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V+ NI+ + +AGAD+ V GS+ F G+ Y ++D++
Sbjct: 181 VSPANIREIAEAGADMFVAGSAIF---GKPDYKVVIDDMR 217
>gi|150016037|ref|YP_001308291.1| ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
gi|149902502|gb|ABR33335.1| Ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
Length = 214
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 148/205 (72%), Gaps = 3/205 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I I K GA IH DVMDG FVPNISFG VI+S+R+ + V
Sbjct: 2 VKIAPSILSADFSKLGEDIERIDKGGADFIHIDVMDGSFVPNISFGLPVIKSIRNRTKKV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ ++I+ +AG DIIT H E+ HI R++ I + GKK +++NP TP +
Sbjct: 62 FDVHLMINNPSNYIDAFIEAGADIITIHHEADKHIDRTINYIKSKGKKAAISLNPGTPTS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+L+D+I +DM+LIM+VNPGFGGQ+ I ++ KIR+ K L + + L EVDGG+ N
Sbjct: 122 VLKDLIPSLDMVLIMSVNPGFGGQKFIPYSLDKIREIKELSDRLNPGLLIEVDGGIDKTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEI 207
+K +++AGA+++V GS+ FN GEI
Sbjct: 182 VKEVIEAGANVIVAGSAVFNG-GEI 205
>gi|294085585|ref|YP_003552345.1| putative pentose-5-phosphate-3-epimerase protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292665160|gb|ADE40261.1| putative pentose-5-phosphate-3-epimerase protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 221
Score = 211 bits (537), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 148/219 (67%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I I PSILA+DFSRLG+EI + +AGA IH DVMDG FVPN++FG +I++LR+
Sbjct: 1 MSHEIIIAPSILASDFSRLGDEIKAVDQAGADWIHLDVMDGHFVPNLTFGPPIIKALRNT 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D +FD HLM+S+ D + A AG + +T H E+ H+ R+L I +G K GVA+NP
Sbjct: 61 TDKIFDAHLMVSNPDVLLADYAAAGANYVTVHAEACDHLDRTLSHIRELGCKAGVALNPH 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP A+++ V+D +D++L+MTVNPGFGGQ I + + KI +I R I +EVDGG+T+
Sbjct: 121 TPAAVIQHVMDRLDLVLVMTVNPGFGGQVFIPAMVEKIATINDMIDGRDIIIEVDGGITA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++V+AGA +LV GS+ F + SY+ + ++ +
Sbjct: 181 ETAGAVVRAGAQVLVAGSAIFKGDNQASYSGNIARIRDA 219
>gi|154685995|ref|YP_001421156.1| ribulose-phosphate 3-epimerase [Bacillus amyloliquefaciens FZB42]
gi|154351846|gb|ABS73925.1| Rpe [Bacillus amyloliquefaciens FZB42]
Length = 216
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 139/202 (68%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFASLGEEIKDVEKGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIENPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGVKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
++E VI+E+D++L+MTVNPGFGGQ+ I S +PKIRQ K L ++ +S +EVDGGV
Sbjct: 122 MIEHVIEELDLVLLMTVNPGFGGQRFIHSVLPKIRQVKQLAEEKGLSELLIEVDGGVNIE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
+AGA+LLV GS+ +NQ
Sbjct: 182 TAPLCTEAGANLLVAGSAVYNQ 203
>gi|262037438|ref|ZP_06010901.1| ribulose-phosphate 3-epimerase [Leptotrichia goodfellowii F0264]
gi|261748528|gb|EEY35904.1| ribulose-phosphate 3-epimerase [Leptotrichia goodfellowii F0264]
Length = 211
Score = 211 bits (536), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 149/217 (68%), Gaps = 6/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I I PS+LAADFS L EI + KAGA+ +H DVMDG FVPNISFGA VI S+R +
Sbjct: 1 MSKKIIIAPSLLAADFSDLKNEIEKVEKAGAEYLHLDVMDGTFVPNISFGAPVISSIRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+ VFD HLM+ + D I DAG DIIT H E++ H+ R+++ I + GKK G+++NP
Sbjct: 61 SNLVFDVHLMVENPDRFIKDFVDAGADIITVHVEATKHLNRTVQLIKSYGKKVGISLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ +++ + IDM+LIMTVNPGFGGQ IE+ KI++ +AL +I +EVDGG+ +
Sbjct: 121 TPLEMIKHELKNIDMVLIMTVNPGFGGQAFIENMTDKIKELRAL--DANIDIEVDGGINT 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K + ++GA++LV GS F+ +Y ++++ LK
Sbjct: 179 ETGKKVKESGANILVAGSYIFSG----NYKEKIDSLK 211
>gi|89098699|ref|ZP_01171581.1| ribulose-phosphate 3-epimerase [Bacillus sp. NRRL B-14911]
gi|89086661|gb|EAR65780.1| ribulose-phosphate 3-epimerase [Bacillus sp. NRRL B-14911]
Length = 214
Score = 211 bits (536), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 137/202 (67%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFSRLGEEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSADFSRLGEEIKDVERGGADYIHVDVMDGHFVPNITIGPLIVEAVRPITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+S H+ R++ I + G K GV +NP TP
Sbjct: 62 LDVHLMIENPDQYIEAFAKAGADYITVHAEASRHLHRTIHLIKSYGVKAGVVLNPATPAE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
L+ +I +IDM+L+MTVNPGFGGQ+ I S +PKIRQ K + ++ + L EVDGGV
Sbjct: 122 ALKHIIQDIDMVLLMTVNPGFGGQKFISSVLPKIRQVKEMAAEQGLDLEIEVDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
K ++AGA++LV GS+ +NQK
Sbjct: 182 AKLCIEAGANVLVAGSAVYNQK 203
>gi|88861003|ref|ZP_01135638.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas tunicata D2]
gi|88816931|gb|EAR26751.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas tunicata D2]
Length = 223
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 141/200 (70%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR+Y +
Sbjct: 6 IAPSILSADFARLGQDVEAVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS I + ADAG IITFHPE+S H+ R+L+ I G + G+ +NP T ++
Sbjct: 66 DVHLMVKPVDSLIPMFADAGASIITFHPEASEHVDRTLQLIKDHGCQAGLVLNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D +D+IL+M+VNPGFGGQ I T+ K+RQ KALI R+I LEVDGGV NI
Sbjct: 126 LEHVMDRLDVILLMSVNPGFGGQSFIPHTLEKLRQVKALINASGRNIRLEVDGGVNVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K + +AGAD+ V GS+ FNQ
Sbjct: 186 KEIAEAGADMFVAGSAIFNQ 205
>gi|126739771|ref|ZP_01755462.1| ribulose-phosphate 3-epimerase [Roseobacter sp. SK209-2-6]
gi|126719003|gb|EBA15714.1| ribulose-phosphate 3-epimerase [Roseobacter sp. SK209-2-6]
Length = 229
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 147/221 (66%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 QIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPMAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS +DS+I+ ADAG D++T H E+ PHI R+L+ I A G K GVA+NP TP
Sbjct: 66 VMDVHLMISPVDSYIDAYADAGADVLTAHIEAGPHIHRTLQAIRAAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D D+I +MTVNPGFGGQ+ I+ T KIRQ + +IG R + +E+DGGV +
Sbjct: 126 EAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-SKIRQLRQMIGDRPVHIEIDGGVDPKTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+ +AGAD+LV GS+ F + G + Y K + +++ +A
Sbjct: 185 PLVAEAGADVLVAGSAVF-RGGSVENPDVYGKNIKEIRDAA 224
>gi|291522857|emb|CBK81150.1| ribulose-phosphate 3-epimerase [Coprococcus catus GD/7]
Length = 222
Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 143/200 (71%), Gaps = 2/200 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++ PSIL+ADF RLGE+I +AGA IH DVMDG FVPNISFG VI+S+R SD
Sbjct: 3 ELKLSPSILSADFGRLGEDIKTADQAGADYIHIDVMDGAFVPNISFGIPVIKSIRKCSDK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI D I A AG DII H E+ H+ R+++ IH++G K GVA+NP TP+
Sbjct: 63 VFDVHLMIEHPDQLIPEFAKAGADIIVVHAEACKHLHRTIQLIHSLGVKAGVALNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++L+ V++++DMIL+MTVNPGFGGQ I + KIR + ++ ++ + +E+DGGV ++
Sbjct: 123 SVLDYVLEDLDMILLMTVNPGFGGQSYIPAMTEKIRTLRHILEEKGLQTDIEIDGGVDTK 182
Query: 182 NIKSLVQAGADLLVVGSSFF 201
N++ +++AGA++LV GS F
Sbjct: 183 NLRMVIEAGANVLVSGSKIF 202
>gi|322418096|ref|YP_004197319.1| ribulose-phosphate 3-epimerase [Geobacter sp. M18]
gi|320124483|gb|ADW12043.1| ribulose-phosphate 3-epimerase [Geobacter sp. M18]
Length = 221
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 146/217 (67%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEEI I AGA +H DVMDG FVPNI+ G ++ + R +
Sbjct: 3 KIAPSILSADFARLGEEIRAIEAAGADYVHIDVMDGQFVPNITIGPLIVEAARRVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ D +I A AG DII H E++ H+ R+++ I ++GKK GV++NP TP++
Sbjct: 63 DVHLMIADPDRYIPDFAKAGSDIIVVHAEATNHLHRTIQLIRSLGKKAGVSLNPATPLSA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++E+D+IL+MTVNPGFGGQ IE+ IPKI+ +A + +R + LEVDGGV NI
Sbjct: 123 LDYVMEELDLILLMTVNPGFGGQSFIEACIPKIQALRATMDRRGVEAELEVDGGVKIDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ FN YA + +LK+ A
Sbjct: 183 ARIAHAGADVFVAGSAVFNSP---DYAATIAELKRRA 216
>gi|298242782|ref|ZP_06966589.1| ribulose-phosphate 3-epimerase [Ktedonobacter racemifer DSM 44963]
gi|297555836|gb|EFH89700.1| ribulose-phosphate 3-epimerase [Ktedonobacter racemifer DSM 44963]
Length = 222
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 151/218 (69%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++IVPSIL+ADF+RLGE++ + GA +I DVMDG FVPNI+ G V+ ++R +
Sbjct: 2 VEIVPSILSADFTRLGEQVRDAETGGAGRIQIDVMDGHFVPNITMGPLVVEAVRRSTRLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLMI++ +I A AG D+I H E PH+ R ++ + A G++ GVA+NP TPV
Sbjct: 62 LEAHLMITNPQEYIQTFAQAGADVIIVHQEVCPHLHRVIQQVKATGRRVGVALNPSTPVF 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+DV+ +DM+LIMTVNPGFGGQ I T+PKI + + ++ +R++S +EVDGG++ +
Sbjct: 122 LLKDVLSLLDMVLIMTVNPGFGGQDFIPETLPKIVELRRMLAERNLSCDIEVDGGISEKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
S+V+AGA+LLV GSS +NQ+ + A + L+++A
Sbjct: 182 AASVVKAGANLLVAGSSVYNQRETVKQA--IERLQRAA 217
>gi|86140257|ref|ZP_01058818.1| ribulose-phosphate 3-epimerase [Roseobacter sp. MED193]
gi|85823060|gb|EAQ43274.1| ribulose-phosphate 3-epimerase [Roseobacter sp. MED193]
Length = 245
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +V
Sbjct: 23 IKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPMAVKAFRPHVKTV 82
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMIS +D++I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 83 MDVHLMISPVDAYIDAYADAGADVLTAHIEAGPHIHRTLQAIRGAGMKAGVALNPGTPAE 142
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D D+I +MTVNPGFGGQQ I+ T K+RQ + +IG R + +E+DGGV +
Sbjct: 143 AVSHLLDLTDLICVMTVNPGFGGQQFIDMTA-KVRQLRQMIGDRPVHIEIDGGVDPKTAP 201
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+V+AGAD+LV GS+ F + G +S Y + + ++ +A
Sbjct: 202 LVVEAGADVLVAGSAVF-KGGSVSTPEVYGENMRAIRAAA 240
>gi|148256633|ref|YP_001241218.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
gi|146408806|gb|ABQ37312.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
Length = 233
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 144/208 (69%), Gaps = 2/208 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEE+ + AGA IH DVMDG FVPNIS+G DVI++LR ++ +FD
Sbjct: 12 IAPSILASDFSKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKALRPHTTKIFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP+ ++
Sbjct: 72 AHLMITPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPLNVI 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++LIM+VNPGFGGQ I S I KI+ +A+ R I +EVDGGV N +L
Sbjct: 132 EYVLDLVDLVLIMSVNPGFGGQAFIPSAIGKIQDLRAMTAGRPIDIEVDGGVGRDNAGAL 191
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLN 214
AGA+ V GS+ F KG A R N
Sbjct: 192 AAAGANAFVAGSAVF--KGGTMEAYRGN 217
>gi|163732752|ref|ZP_02140197.1| ribulose-5-phosphate 3-epimerase [Roseobacter litoralis Och 149]
gi|161394112|gb|EDQ18436.1| ribulose-5-phosphate 3-epimerase [Roseobacter litoralis Och 149]
Length = 230
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 146/223 (65%), Gaps = 5/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R + +
Sbjct: 6 SLKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPSTCAAIRPHIKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ A AG D+IT H E+ PHI R+++ I A G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAFAKAGADVITAHVEAGPHIHRTMQAIRAAGAKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +E ++D +D++ +MTVNPGFGGQ+ I S + K+RQ +A+IG R I +E+DGGV
Sbjct: 126 SSVEYLLDMVDLVCVMTVNPGFGGQKFIHSQVEKVRQLRAMIGDRPIHIEIDGGVDPATA 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSALA 222
+V AGAD+LV GS+ F + G +S Y + ++ + L+
Sbjct: 186 PLVVAAGADVLVAGSAVF-RGGSVSKPAPYGANIKAIRDAVLS 227
>gi|154251775|ref|YP_001412599.1| ribulose-phosphate 3-epimerase [Parvibaculum lavamentivorans DS-1]
gi|154155725|gb|ABS62942.1| Ribulose-phosphate 3-epimerase [Parvibaculum lavamentivorans DS-1]
Length = 220
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/219 (49%), Positives = 154/219 (70%), Gaps = 3/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSILA+DF+RLGEE+ IT+AGA IH DVMDG FVPNI+ G DV++++R +SD
Sbjct: 3 GIKIAPSILASDFARLGEEVRAITEAGADYIHVDVMDGHFVPNITIGPDVVKAIRPHSDK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMIS +D +I+ A AG DIITFHPE+ PH R+++ I A G K G+++NP TP+
Sbjct: 63 VFDVHLMISPVDLYIDAFAKAGADIITFHPEAGPHPHRTIQAIKAAGCKAGLSLNPGTPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+L ++ ++D++L+M+VNPGFGGQ IES + +I + I + R++ LEVDGG+
Sbjct: 123 ELLWPLLGDLDLVLVMSVNPGFGGQSFIESQLARIEIIRKRIDESGRAVELEVDGGINLD 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV G++ F + G +YAK + L+ A
Sbjct: 183 TAPRAIAAGADVLVAGTATF-KGGPSAYAKNIAALRGGA 220
>gi|294669711|ref|ZP_06734778.1| hypothetical protein NEIELOOT_01612 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308624|gb|EFE49867.1| hypothetical protein NEIELOOT_01612 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 237
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 139/205 (67%), Gaps = 6/205 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSIL+ADF+RLGEE+ ++ +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 14 FRIAPSILSADFARLGEEVGSVVEAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASVP 73
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG DIITFHPE+S H+ RSL I G + G+ +NP T V+
Sbjct: 74 VDVHLMVEPVDDLIVAFAKAGADIITFHPEASRHVDRSLSLIREHGCQAGLVLNPATSVS 133
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGV 178
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +AL+ + R I+LEVDGG+
Sbjct: 134 VLENVLDRLDMVLLMSVNPGFGGQGFIPHTLEKIRRTRALLDEYQAAAGRRIALEVDGGI 193
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQ 203
NI + AGAD V GS+ F Q
Sbjct: 194 KVGNIAEVAAAGADTFVAGSAIFGQ 218
>gi|332524773|ref|ZP_08400970.1| ribulose-phosphate 3-epimerase [Rubrivivax benzoatilyticus JA2]
gi|332108079|gb|EGJ09303.1| ribulose-phosphate 3-epimerase [Rubrivivax benzoatilyticus JA2]
Length = 220
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 141/202 (69%), Gaps = 2/202 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+L+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++LR ++++
Sbjct: 3 TYRIAPSLLSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTFGPMVCQALRKHTEA 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ A AG D+++FHP++S H+ R+L+ I A G + G+ NP P+
Sbjct: 63 PIDVHLMVQPVDALATAFAKAGADLVSFHPDASTHVDRTLQLIKAEGCQAGLVFNPAEPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
+LE VID++D++LIM+VNPGFGGQ I+S + KI +A+ +I R I LEVDGG+
Sbjct: 123 DVLEWVIDKVDLVLIMSVNPGFGGQSFIDSALRKIEKARRIIDASGRDIRLEVDGGIKVD 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
NI+ + AGAD V GS+ F Q
Sbjct: 183 NIRRVADAGADTFVAGSAIFGQ 204
>gi|255318302|ref|ZP_05359537.1| ribulose-phosphate 3-epimerase [Acinetobacter radioresistens SK82]
gi|262379047|ref|ZP_06072203.1| ribulose-phosphate 3-epimerase [Acinetobacter radioresistens SH164]
gi|255304614|gb|EET83796.1| ribulose-phosphate 3-epimerase [Acinetobacter radioresistens SK82]
gi|262298504|gb|EEY86417.1| ribulose-phosphate 3-epimerase [Acinetobacter radioresistens SH164]
Length = 228
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE + + AGA +HFDVMD +VPN++FGA V ++L+ Y
Sbjct: 1 MSKPYLIAPSILSADFARLGENVEKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKKY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I DAG DIITFHPE+S HI RSL+ I + G + G+ NP
Sbjct: 61 GIQAPIDVHLMVSPVDRIIGDFLDAGADIITFHPEASDHIDRSLQLIKSGGAQAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQ + +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLRQVRKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI+ + +AGAD+ V GS+ F G+ Y +++++
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIF---GKPDYKNVIDEMR 217
>gi|187778903|ref|ZP_02995376.1| hypothetical protein CLOSPO_02498 [Clostridium sporogenes ATCC
15579]
gi|187772528|gb|EDU36330.1| hypothetical protein CLOSPO_02498 [Clostridium sporogenes ATCC
15579]
Length = 216
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG VI+S+R+ ++
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADAIHIDVMDGRFVPNISFGIPVIKSIRNLTNKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A AG DI++ H E+ HI R++ I + G K VA+NP TPV+
Sbjct: 62 FDVHLMIEEPSKYIEDFAKAGADIVSVHYEADKHIDRTINYIKSFGIKAAVALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ KAL K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIKYASEKIKEVKALSEKYNKELIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
IK + GA+LLV GS+ F + GEI
Sbjct: 182 IKEVADCGANLLVAGSAVF-KNGEIE 206
>gi|146339841|ref|YP_001204889.1| ribulose-phosphate 3-epimerase [Bradyrhizobium sp. ORS278]
gi|146192647|emb|CAL76652.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Bradyrhizobium sp. ORS278]
Length = 233
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 144/208 (69%), Gaps = 2/208 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DF++LGEE+ + AGA IH DVMDG FVPNIS+G DVI++LR ++ +FD
Sbjct: 12 IAPSILASDFAKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKALRPHTTKIFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP+ ++
Sbjct: 72 AHLMITPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNPSTPLNVI 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++LIM+VNPGFGGQ I S I K++ +A+ R I +EVDGGV N +L
Sbjct: 132 EYVLDLVDLVLIMSVNPGFGGQAFIASAIGKVQDLRAMTAGRPIDIEVDGGVGRDNAGAL 191
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLN 214
AGA+ V GS+ F KG A R N
Sbjct: 192 AAAGANAFVAGSAVF--KGGTMEAYRSN 217
>gi|169827069|ref|YP_001697227.1| ribulose-phosphate 3-epimerase [Lysinibacillus sphaericus C3-41]
gi|168991557|gb|ACA39097.1| Ribulose-phosphate 3-epimerase [Lysinibacillus sphaericus C3-41]
Length = 222
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 141/202 (69%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSILAA+F++LGEE+ + +AGAK IH DVMDG FVPNISFG+ V+ ++R +D
Sbjct: 2 IQIAPSILAANFAKLGEEVKEVEQAGAKLIHIDVMDGHFVPNISFGSIVLDAIRPLTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 62 LDVHLMIENPDQYIEQFAQAGADYITVHAEACRHLHRTIQLIRSYGIKAGVVLNPHTPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+++IDM+L+MTVNPGFGGQ+ I S +PKI LI +R I++E+DGG+T+
Sbjct: 122 SIQHVLEDIDMVLLMTVNPGFGGQKFIHSVVPKIEALSTLIKERGLDIAIEIDGGITAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I QAGA + V GS+ ++++
Sbjct: 182 IVPCAQAGATIFVAGSAIYSKE 203
>gi|284047700|ref|YP_003398039.1| ribulose-phosphate 3-epimerase [Acidaminococcus fermentans DSM
20731]
gi|283951921|gb|ADB46724.1| ribulose-phosphate 3-epimerase [Acidaminococcus fermentans DSM
20731]
Length = 213
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 142/197 (72%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL++DFSRLGEE++ I AGA H DVMDG FVPN++FGA V++SLR ++ FD
Sbjct: 4 IAPSILSSDFSRLGEEVARIQDAGADWCHIDVMDGQFVPNLTFGAPVVKSLRKRTEMFFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLM+ + +++++ A AG D+I H E++ H+ R L++IH+ G + GVA+NP TP+ +
Sbjct: 64 CHLMVENPENYVDSFAAAGADLICVHAEATHHLHRLLQSIHSKGIQAGVALNPATPLCQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+++ DMILIM+VNPGFGGQ+ I +++ KIR+ K +I +R + +EVDGGV K
Sbjct: 124 EEILPYADMILIMSVNPGFGGQKFIPTSVDKIRRLKQMIRERDLKTLIEVDGGVNGETAK 183
Query: 185 SLVQAGADLLVVGSSFF 201
+ +AGAD+LV GS F
Sbjct: 184 ACREAGADVLVAGSFVF 200
>gi|168182579|ref|ZP_02617243.1| ribulose-phosphate 3-epimerase [Clostridium botulinum Bf]
gi|237795941|ref|YP_002863493.1| ribulose-phosphate 3-epimerase [Clostridium botulinum Ba4 str. 657]
gi|182674260|gb|EDT86221.1| ribulose-phosphate 3-epimerase [Clostridium botulinum Bf]
gi|229264167|gb|ACQ55200.1| ribulose-phosphate 3-epimerase [Clostridium botulinum Ba4 str. 657]
Length = 216
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 143/206 (69%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A AG DII+ H E+ HI R++ I ++G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFAKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ KAL K + + +EVDGG+T N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKALSEKNNKDLIIEVDGGITKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
IK + GADLLV GS+ F + GEI
Sbjct: 182 IKEIANCGADLLVAGSAVF-KNGEIE 206
>gi|126649669|ref|ZP_01721905.1| ribulose-phosphate 3-epimerase [Bacillus sp. B14905]
gi|126593388|gb|EAZ87333.1| ribulose-phosphate 3-epimerase [Bacillus sp. B14905]
Length = 223
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 142/202 (70%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSILAA+F++LGEE+ + +AGAK IH DVMDG FVPNISFG+ V+ ++R +D
Sbjct: 3 IQIAPSILAANFAKLGEEVKEVEQAGAKLIHIDVMDGHFVPNISFGSIVLDAIRPLTDLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 63 LDVHLMIENPDQYIEQFAQAGADYITVHVEACRHLHRTIQLIRSYGIKAGVVLNPHTPIE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+++IDM+L+MTVNPGFGGQ+ I S +PKI +LI +R I++E+DGG+T+
Sbjct: 123 SIQHVLEDIDMVLLMTVNPGFGGQKFIHSVVPKIEALSSLIKERGLDIAIEIDGGITAET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I QAGA + V GS+ ++++
Sbjct: 183 IVPCAQAGATIFVAGSAIYSKE 204
>gi|58039796|ref|YP_191760.1| ribulose-phosphate 3-epimerase [Gluconobacter oxydans 621H]
gi|58002210|gb|AAW61104.1| Ribulose-phosphate 3-epimerase [Gluconobacter oxydans 621H]
Length = 225
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 142/204 (69%), Gaps = 4/204 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PSI + PS+LAADFSRLGEEI++I +A +H DVMDG FVPNISFG +I +LR ++D
Sbjct: 5 PSIIVAPSLLAADFSRLGEEIASIARA--PWLHLDVMDGHFVPNISFGPPLIAALRRHTD 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ FD HLMI +D ++ A AG D IT H E++PH+ RSL+TI A+G + GVAI P TP
Sbjct: 63 AKFDVHLMIDPVDPYLEATAKAGADHITVHVENAPHLHRSLQTIRALGCRPGVAICPATP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
L +V+D +D+IL+MTVNPGFGGQ ++S + KIR +I + R I L VDGG+
Sbjct: 123 AVALSEVMDLVDIILVMTVNPGFGGQSFLDSQLSKIRTLAEMIRESGRDIILAVDGGIDP 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+V+AGA +LV GS+ F ++
Sbjct: 183 STAPRVVEAGATMLVAGSAIFGKE 206
>gi|225023765|ref|ZP_03712957.1| hypothetical protein EIKCOROL_00629 [Eikenella corrodens ATCC
23834]
gi|224943459|gb|EEG24668.1| hypothetical protein EIKCOROL_00629 [Eikenella corrodens ATCC
23834]
Length = 227
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 142/220 (64%), Gaps = 9/220 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ + AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVQRVIAAGADWIHFDVMDNHYVPNLTFGPMVCAALKPYATVPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG DIITFH E+S HI RSL I G + G+ +NP TPV +
Sbjct: 65 DVHLMVEPVDEMIQAFAKAGADIITFHLEASRHIDRSLSLIRDSGCRAGLVLNPATPVYV 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGVT 179
LE V+D++D++L+M+VNPGFGGQ+ I T+ KI Q ++L R I +EVDGG+
Sbjct: 125 LEHVLDKLDVVLLMSVNPGFGGQKFIPHTLEKIEQVRSLTDLYAAESGRRILIEVDGGIK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + AGAD V GS+ FNQ YA + ++++
Sbjct: 185 ADNIAEVAAAGADTFVAGSAIFNQP---DYAAVITEMRRQ 221
>gi|302874755|ref|YP_003843388.1| ribulose-phosphate 3-epimerase [Clostridium cellulovorans 743B]
gi|307690630|ref|ZP_07633076.1| ribulose-phosphate 3-epimerase [Clostridium cellulovorans 743B]
gi|302577612|gb|ADL51624.1| ribulose-phosphate 3-epimerase [Clostridium cellulovorans 743B]
Length = 217
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 140/201 (69%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGE++ N+ KAGA IH DVMDG FVPNISFG VI S+R + +
Sbjct: 2 IKISPSILSADFSKLGEDVINLEKAGADMIHIDVMDGNFVPNISFGMPVINSIRPLTKAT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I D G DIIT H E+ HI ++ I + G K GVA+NP T +
Sbjct: 62 FDVHLMIEEPSKYIKQFVDLGGDIITIHYEADRHIDSTINMIKSYGVKAGVALNPGTSTS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+L+D+I E+DM+LIMTVNPGFGGQ+ IE T+ KIR+ + + K + L +VDGG+ N
Sbjct: 122 LLKDIIREVDMVLIMTVNPGFGGQKFIEYTLEKIREVREMADKLNPDLLIQVDGGIGREN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
I+ +V+AGA+++V GS+ F +
Sbjct: 182 IRKVVEAGANVIVAGSAVFKE 202
>gi|229592939|ref|YP_002875058.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens SBW25]
gi|229364805|emb|CAY52822.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens SBW25]
Length = 224
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDKVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I DAG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITAPIDAHLMVSPVDRIIGDFVDAGATYITFHPEASLHVDRTLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+++LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLSVLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V +NI+ + AGAD V GS+ FN
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFN 204
>gi|84514528|ref|ZP_01001892.1| Pentose-5-phosphate-3-epimerase [Loktanella vestfoldensis SKA53]
gi|84511579|gb|EAQ08032.1| Pentose-5-phosphate-3-epimerase [Loktanella vestfoldensis SKA53]
Length = 227
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/223 (46%), Positives = 142/223 (63%), Gaps = 5/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 6 SIKIAPSILSADFANFGAECRAIEAQGADWVHVDVMDGHFVPNITFGPATCAAIRPHIKG 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I A AG DIIT H E+ PHI R+++ I G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIEAFAKAGADIITAHVEAGPHIHRTMQAIRGAGAKAGVALNPATPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
A +E ++D +D++ +MTVNPGFGGQ+ I S + K+RQ +A+IG R I +E+DGGV
Sbjct: 126 AAVEYLLDMVDLVCVMTVNPGFGGQKFIHSQVEKVRQLRAMIGDRPIHIEIDGGVDPLTA 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSALA 222
+ AGAD+LV GS+ F + G +S Y + ++ +A A
Sbjct: 186 PLVAAAGADVLVAGSAVF-RGGSVSDPAPYGANIRAIRDAAKA 227
>gi|188590694|ref|YP_001920568.1| ribulose-phosphate 3-epimerase [Clostridium botulinum E3 str.
Alaska E43]
gi|251778393|ref|ZP_04821313.1| ribulose-phosphate 3-epimerase [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|188500975|gb|ACD54111.1| ribulose-phosphate 3-epimerase [Clostridium botulinum E3 str.
Alaska E43]
gi|243082708|gb|EES48598.1| ribulose-phosphate 3-epimerase [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 214
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 146/199 (73%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFSRLGE+I I KAGA+ IH DVMDG FVPNISFG +++S+R+ ++ V
Sbjct: 2 VKIAPSILSADFSRLGEDIERIDKAGAEFIHIDVMDGSFVPNISFGFPIMKSIRNKTEKV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I+ +AG D+IT H E+ HI R+++ I + GK+ +A+NP TP
Sbjct: 62 FDVHLMIENPSKYIDDFIEAGADLITVHYEADRHIDRTIQYIKSKGKRAAIALNPGTPTM 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+L+D+I ++DM+LIM+VNPGFGGQ+ I ++ KI++ K + + SL +VDGGV S N
Sbjct: 122 VLKDLIPQLDMVLIMSVNPGFGGQKFIPYSLEKIKEVKEMSKHSNPSLLIQVDGGVDSSN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
I +V+AGA+++V GS+ F
Sbjct: 182 ISEVVEAGANVIVAGSAVF 200
>gi|118591568|ref|ZP_01548965.1| Pentose-5-phosphate-3-epimerase [Stappia aggregata IAM 12614]
gi|118435896|gb|EAV42540.1| Pentose-5-phosphate-3-epimerase [Stappia aggregata IAM 12614]
Length = 233
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 147/222 (66%), Gaps = 5/222 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PSI+I PSIL+ADF+ G EI I + G +H DVMDG FVPN++FG + +++R +
Sbjct: 5 PSIRIAPSILSADFADFGAEIRAIEQQGCDWVHVDVMDGHFVPNLTFGPQLCKAIRPHIT 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I A+AG DIIT H E+ PH R+L+ I A GKK G+A+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIEAFAEAGADIITAHLEAGPHPHRTLQAIRATGKKAGLALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V + ++D D+IL+MTVNPGFGGQ+ I++ + +IR+ KALIG R I +EVDGG+
Sbjct: 125 VEAADPLLDLCDLILVMTVNPGFGGQKFIQTQVDQIRRLKALIGDRPILIEVDGGIDPAT 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+ AGA +LV GS+ F + G + Y + L+++A
Sbjct: 185 APLVADAGARVLVAGSAVF-RGGSVQVPSVYGDNIRTLREAA 225
>gi|237803375|ref|ZP_04590960.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806727|ref|ZP_04593431.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025356|gb|EGI05412.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027841|gb|EGI07896.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 224
Score = 208 bits (530), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSCGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ IH G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIHEGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|83945788|ref|ZP_00958131.1| ribulose-phosphate 3-epimerase [Oceanicaulis alexandrii HTCC2633]
gi|83850791|gb|EAP88653.1| ribulose-phosphate 3-epimerase [Oceanicaulis alexandrii HTCC2633]
Length = 220
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 148/219 (67%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PSIL+ADF+RLG+E+ I AGA IH DVMDG FVPN++ G V+++LR +
Sbjct: 1 MARSTIISPSILSADFARLGDEVKAIDAAGADWIHIDVMDGHFVPNLTIGPAVVKALRPW 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD FD HLMIS +D+++ A+AG D+IT HPE+ PH R+++TI + G K G A+NP
Sbjct: 61 SDQPFDVHLMISPVDAYVADFAEAGADMITAHPEAGPHFHRTVQTIKSHGVKAGAALNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
+ + +++ V+DE+D++LIM+VNPGFGGQ + S + KI + I +R + +EVDGGV
Sbjct: 121 SSLDMIDYVLDELDLVLIMSVNPGFGGQSFLTSQLRKIETLRKTIERRGLDTMIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + + AGAD LV GS+ F + G +YA + L+
Sbjct: 181 NPQTAQHCINAGADALVAGSAVF-KGGPGAYAGNIAALR 218
>gi|164687795|ref|ZP_02211823.1| hypothetical protein CLOBAR_01439 [Clostridium bartlettii DSM
16795]
gi|164603070|gb|EDQ96535.1| hypothetical protein CLOBAR_01439 [Clostridium bartlettii DSM
16795]
Length = 218
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 141/200 (70%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+RL E++ + KAG + +H DVMDG FVPNI+ G +++SLR + V
Sbjct: 2 IKLAPSILSADFARLLEDVKKVEKAGCEYLHIDVMDGHFVPNITLGPGIVKSLRKDVNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D++I ADAGCDII H E+ H+ R+++ I + G K GVA+NP TP+
Sbjct: 62 FDAHLMIENPDNYIKEFADAGCDIIVVHQEACTHLHRTIQNIKSHGIKAGVALNPATPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+ ++DM+L+M+VNPGFGGQ I KI++ KALI K + I +EVDGGV N
Sbjct: 122 TIKYVLQDVDMVLLMSVNPGFGGQSYIPVVTEKIKELKALIDKMNLDIDIEVDGGVKPSN 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I +V AGA+++V GS+ FN
Sbjct: 182 IAEVVNAGANVIVAGSAIFN 201
>gi|326402170|ref|YP_004282251.1| ribulose-5-phosphate 3-epimerase [Acidiphilium multivorum AIU301]
gi|325049031|dbj|BAJ79369.1| ribulose-5-phosphate 3-epimerase [Acidiphilium multivorum AIU301]
Length = 220
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 143/216 (66%), Gaps = 5/216 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PS I PS+LAADF RL EE++ + +AGA +H DVMDG FVPNISFGA V+ +LR ++
Sbjct: 4 PSPIIAPSLLAADFGRLREEVAAVERAGAHWLHLDVMDGHFVPNISFGALVLNALRPHTR 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI+ D ++ A AG D IT H E+ PH+ RSL+TI A+G K GVAINP TP
Sbjct: 64 LAFDVHLMIAPADPYLADFAKAGADQITVHAEAGPHLHRSLQTIRALGLKAGVAINPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ V+D ID+I +MTVNPGFGGQ + +PKI + + ++ + R I +E DGG+ +
Sbjct: 124 AEAVRHVLDLIDIINVMTVNPGFGGQSFLAGQLPKIAELRRMVTEAGRDIRIETDGGIDA 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++AGAD+L+ GS+ F G+ YA + L
Sbjct: 184 ASAPRALEAGADVLIAGSAIF---GKPDYAAAIAAL 216
>gi|289422334|ref|ZP_06424184.1| ribulose-phosphate 3-epimerase [Peptostreptococcus anaerobius
653-L]
gi|289157279|gb|EFD05894.1| ribulose-phosphate 3-epimerase [Peptostreptococcus anaerobius
653-L]
Length = 219
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 150/218 (68%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+A+F+ L + AG + +H DVMDG +VPNI+FG VI+SLR D V
Sbjct: 2 IKLAPSILSANFAELLADCKKAQDAGCEYLHLDVMDGHYVPNITFGPAVIKSLRKDIDMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D++++ +ADAGCDI+T H E+ H+ R+++ I + G K GV +NP TPV
Sbjct: 62 FDAHLMITDPDAYMDALADAGCDIVTVHQEACTHLHRTIQNIKSHGMKAGVVLNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ V+ ++DM+L+M+VNPGFGGQ I TI KI++ K++I +R I +EVDGGV + N
Sbjct: 122 TIKHVLCDVDMVLLMSVNPGFGGQAFIPETINKIKELKSMIDERGLEIDIEVDGGVKASN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK +V AGA+++V GSS F G K + DL+ +A
Sbjct: 182 IKEVVDAGANIIVGGSSIF---GHDDINKAVEDLRNAA 216
>gi|89068142|ref|ZP_01155559.1| Pentose-5-phosphate-3-epimerase [Oceanicola granulosus HTCC2516]
gi|89046381|gb|EAR52438.1| Pentose-5-phosphate-3-epimerase [Oceanicola granulosus HTCC2516]
Length = 226
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 142/219 (64%), Gaps = 3/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSILAADF+ G E+ + GA IH DVMDG FVPN++FG ++++LR + +V
Sbjct: 6 VAIAPSILAADFADFGREVRAVEDQGADMIHVDVMDGHFVPNLTFGPQMVKALRPHVKTV 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I+ A+AG DI++ H E+ PHI R+L+ I G K G+A+NP TPV
Sbjct: 66 MDVHLMIAPVDPYIDAYAEAGADILSAHYEAGPHIHRTLQAIRGHGMKAGLALNPGTPVE 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ V+D D +L+MTVNPGFGGQ +ES + +IR+ +A+IG R I++ +DGGV +R
Sbjct: 126 VAGPVLDLCDTVLVMTVNPGFGGQSFLESQLEQIRRLRAMIGDRPITIGIDGGVDTRTAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKKSA 220
AG D+LV GS+ F Y + + L+++A
Sbjct: 186 LAAAAGGDMLVAGSAIFKHGSADDPAPYGEAITALREAA 224
>gi|110678440|ref|YP_681447.1| ribulose-5-phosphate 3-epimerase [Roseobacter denitrificans OCh
114]
gi|109454556|gb|ABG30761.1| ribulose-5-phosphate 3-epimerase [Roseobacter denitrificans OCh
114]
Length = 230
Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 144/223 (64%), Gaps = 5/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R + +
Sbjct: 6 SFKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPSTCAAIRPHIKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ A AG D+IT H E+ PHI R+++ I A G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAFAKAGADVITAHVEAGPHIHRTMQAIRAAGAKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +E ++D +D++ +MTVNPGFGGQ+ I S + K+RQ +A+IG R I +E+DGGV
Sbjct: 126 SSVEYLLDMVDLVCVMTVNPGFGGQKFIHSQVEKVRQLRAMIGDRPIHIEIDGGVDPTTA 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSALA 222
+ AGAD+LV GS+ F + G +S Y + ++ + L+
Sbjct: 186 PLVAAAGADVLVAGSAVF-RGGSVSNPAPYGANIKAIRDAVLS 227
>gi|121533691|ref|ZP_01665518.1| Ribulose-phosphate 3-epimerase [Thermosinus carboxydivorans Nor1]
gi|121307682|gb|EAX48597.1| Ribulose-phosphate 3-epimerase [Thermosinus carboxydivorans Nor1]
Length = 216
Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 146/215 (67%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+LAADF+RL EE+ + + GA +H D+MDG FVPN++FGA V+ +LR S
Sbjct: 2 VKIAPSLLAADFTRLAEEVLKVEQGGADLLHLDIMDGHFVPNLTFGAPVVAALRQVSKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ HIN AG D+IT H E+ PH+ R L+TI G + G+A+NP TP+
Sbjct: 62 FDVHLMITNPQDHINAFIKAGADLITVHAETHPHLHRLLQTIKDQGVRAGIALNPSTPLV 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E+V+ +DM+L+M+VNPGFGGQQ I + + KIR+ + +I +R++ +EVDGG+ +
Sbjct: 122 TIEEVLPYVDMVLLMSVNPGFGGQQFISTVLDKIRRLRQMITERNLPVVIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+++ AGA +LV GS+ + G + A+ + LK
Sbjct: 182 APAVIAAGATILVAGSAVY---GAVDAAQAIASLK 213
>gi|254461896|ref|ZP_05075312.1| ribulose-phosphate 3-epimerase [Rhodobacterales bacterium HTCC2083]
gi|206678485|gb|EDZ42972.1| ribulose-phosphate 3-epimerase [Rhodobacteraceae bacterium
HTCC2083]
Length = 225
Score = 208 bits (529), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 141/212 (66%), Gaps = 2/212 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSIL+A+F+ G EI + GA IH DVMDG FVPN+SFGA ++R + +
Sbjct: 6 SVKIAPSILSANFANFGAEIEAVEAQGADWIHVDVMDGHFVPNLSFGATTCAAIRPHIKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ D HLMIS +D++I+ A+AG D IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 MMDVHLMISPVDAYIDGFAEAGADFITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +E ++D D+I +MTVNPGFGGQ+ I PKI + +A+IG R + +E+DGGVT
Sbjct: 126 SAVEHLLDICDLICVMTVNPGFGGQKFIP-LAPKIAELRAMIGDRPVHIEIDGGVTPDTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
KS V AGAD+LV GS+ F + G +S D
Sbjct: 185 KSCVDAGADVLVAGSAVF-KGGSVSNPAPYGD 215
>gi|197119889|ref|YP_002140316.1| ribulose-phosphate 3-epimerase [Geobacter bemidjiensis Bem]
gi|253702183|ref|YP_003023372.1| ribulose-phosphate 3-epimerase [Geobacter sp. M21]
gi|197089249|gb|ACH40520.1| ribulose-phosphate 3-epimerase [Geobacter bemidjiensis Bem]
gi|251777033|gb|ACT19614.1| ribulose-phosphate 3-epimerase [Geobacter sp. M21]
Length = 221
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 145/217 (66%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEEI I GA +H DVMDG FVPNI+ G ++ + R +
Sbjct: 3 KIAPSILSADFARLGEEIKAIEAGGADYVHIDVMDGQFVPNITIGPLIVEAARRVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E++ H+ R+++ I ++GKK GV++NP TP+ +
Sbjct: 63 DVHLMIDNPDRYIPDFAKAGSDIIVVHAEATNHLHRTVQLIKSLGKKAGVSLNPATPLNL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++++D+IL+MTVNPGFGGQ IE+ IPKI+ +A + +R I LEVDGGV NI
Sbjct: 123 LDYVMEDLDLILLMTVNPGFGGQSFIEACIPKIQALRATMDRRGIEAELEVDGGVKIDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ FN YA + +LKK A
Sbjct: 183 ARISHAGADVFVAGSAVFNSP---DYAATIAELKKKA 216
>gi|257414256|ref|ZP_05591959.1| ribulose-phosphate 3-epimerase [Roseburia intestinalis L1-82]
gi|257200639|gb|EEU98923.1| ribulose-phosphate 3-epimerase [Roseburia intestinalis L1-82]
gi|291541048|emb|CBL14159.1| ribulose-phosphate 3-epimerase [Roseburia intestinalis XB6B4]
Length = 225
Score = 207 bits (528), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 143/196 (72%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADFSRLGE+I + +AGA+ +H DVMDG FVP+ISFG VIR++R+ +D +FD H
Sbjct: 14 PSILSADFSRLGEQIKELDEAGAQYVHIDVMDGMFVPSISFGMPVIRAIRACTDRIFDVH 73
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I+ A+AG D+IT H ES H+ R++ I G GVAINP TPV+ +
Sbjct: 74 LMIEEPGRYIDEFAEAGADLITVHAESCRHLDRTIEKIKEKGLLAGVAINPATPVSAISC 133
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
V++++DM+L+MTVNPGFGGQ+LI T+ K+R+ + ++ ++ + +EVDGGV N++ L
Sbjct: 134 VLEKVDMVLVMTVNPGFGGQKLIPYTVEKVRELRKIVDEKGLKTDIEVDGGVNLSNVEEL 193
Query: 187 VQAGADLLVVGSSFFN 202
+ AGA+++V GS+ F+
Sbjct: 194 MDAGANIIVAGSAIFS 209
>gi|332850601|ref|ZP_08432864.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6013150]
gi|332865685|ref|ZP_08436507.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6013113]
gi|332730593|gb|EGJ61908.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6013150]
gi|332735158|gb|EGJ66239.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6013113]
Length = 235
Score = 207 bits (528), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 142/206 (68%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGCDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F Q
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQ 206
>gi|299131713|ref|ZP_07024908.1| ribulose-phosphate 3-epimerase [Afipia sp. 1NLS2]
gi|298591850|gb|EFI52050.1| ribulose-phosphate 3-epimerase [Afipia sp. 1NLS2]
Length = 233
Score = 207 bits (528), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 138/196 (70%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA+D++RLGEE+ + AGA +H DVMDG FVPNIS+G DVI+++R +S+ +FD
Sbjct: 12 IAPSVLASDYARLGEEVRAVDTAGADWLHMDVMDGHFVPNISYGPDVIKAMRPHSNKIFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GVA+NP TP +
Sbjct: 72 AHLMIAPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVALNPATPANAI 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+M+VNPGFGGQ I + + KI +A+ R I +EVDGGVT+ N +
Sbjct: 132 EYVLDLVDIVLVMSVNPGFGGQSFIPAVLEKITTIRAMCAGRPIDIEVDGGVTAGNAAQI 191
Query: 187 VQAGADLLVVGSSFFN 202
AGA+ V GSS F
Sbjct: 192 AAAGANAFVAGSSVFK 207
>gi|126725016|ref|ZP_01740859.1| Pentose-5-phosphate-3-epimerase [Rhodobacterales bacterium
HTCC2150]
gi|126706180|gb|EBA05270.1| Pentose-5-phosphate-3-epimerase [Rhodobacterales bacterium
HTCC2150]
Length = 228
Score = 207 bits (528), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 138/205 (67%), Gaps = 1/205 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 9 SVKIAPSILSADFANFGAECEAIEAQGADWVHIDVMDGHFVPNITFGPSTCAAIRPHIKG 68
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ D HLMI+++D +I A +G D IT H E+ PHI R+L+ I G K GVA+NP TPV
Sbjct: 69 IMDVHLMIATVDPYIEAFAKSGADFITAHVEAGPHIHRTLQAIRGAGCKAGVALNPGTPV 128
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +E+++ +D++ +MTVNPGFGGQ IES + K R +A+IG R I +E+DGGV+
Sbjct: 129 SAVENLLGMVDLVCVMTVNPGFGGQSFIESQVEKTRVLRAMIGDRPIHIEIDGGVSPLTA 188
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
KS+V AGAD+LV GS+ F + G +S
Sbjct: 189 KSVVDAGADVLVAGSAVF-KGGSVS 212
>gi|163738986|ref|ZP_02146399.1| Ribulose-phosphate 3-epimerase [Phaeobacter gallaeciensis BS107]
gi|161387791|gb|EDQ12147.1| Ribulose-phosphate 3-epimerase [Phaeobacter gallaeciensis BS107]
Length = 229
Score = 207 bits (528), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 147/221 (66%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 SIKIAPSILSADFANFGQEIQAIESQGADWVHIDVMDGHFVPNLTFGPMAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I A G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRAAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D D+I +MTVNPGFGGQ+ I+ T K+R +A+IG R + +E+DGGV +
Sbjct: 126 EAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-SKVRSLRAMIGDRPVHIEIDGGVDPKTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+ +AGAD+LV GS+ F + G + Y + + +++ +A
Sbjct: 185 PLVAEAGADVLVAGSAVF-KGGSVDTPEVYGENIRNIRAAA 224
>gi|254281536|ref|ZP_04956504.1| ribulose-phosphate 3-epimerase [gamma proteobacterium NOR51-B]
gi|219677739|gb|EED34088.1| ribulose-phosphate 3-epimerase [gamma proteobacterium NOR51-B]
Length = 224
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 145/215 (67%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
QI PSIL+ADF+RLGEE+ ++ AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 5 QIAPSILSADFARLGEEVDSVLAAGADIVHFDVMDNHYVPNLTIGPMVCQALRDYGVAAP 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+S +D+ I +AG ITFHP++S H+ RSL+ I G K+G+ NP TP+
Sbjct: 65 IDVHLMVSPVDALIGSFVEAGASYITFHPDASTHVDRSLQLIRDAGCKSGLVFNPATPLD 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+L VID++DMIL+M+VNPGFGGQ+ I +T+ K+R+A+ LI I LEVDGGV + N
Sbjct: 125 VLRYVIDKVDMILLMSVNPGFGGQKFIPATLDKLREARGLIDNSGLPIRLEVDGGVNTAN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + AGAD V GS+ FNQ Y + + D++
Sbjct: 185 IAVIAAAGADTFVAGSAIFNQP---DYRQVIADMR 216
>gi|258541969|ref|YP_003187402.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-01]
gi|256633047|dbj|BAH99022.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-01]
gi|256636104|dbj|BAI02073.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-03]
gi|256639159|dbj|BAI05121.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-07]
gi|256642213|dbj|BAI08168.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-22]
gi|256645268|dbj|BAI11216.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-26]
gi|256648323|dbj|BAI14264.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-32]
gi|256651376|dbj|BAI17310.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654367|dbj|BAI20294.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-12]
Length = 225
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 143/213 (67%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+RLGEE+S + +AGA +H DVMDG FVPNISFG V+++LR SD FD
Sbjct: 9 IAPSVLAADFTRLGEEVSALKQAGADWVHLDVMDGHFVPNISFGPAVVKALRPCSDLPFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D ++ A AG D I H E+ PH RSL+ I +G K GV + P TP +
Sbjct: 69 VHLMIAPVDPYLEAFAQAGADQILIHIEAGPHTHRSLQRIRDLGAKPGVVLCPATPPEAI 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+V+D +D+IL+MTVNPGFGGQ+ + S +PKI++ + +I + R I L VDGG+ +
Sbjct: 129 SEVLDLVDIILVMTVNPGFGGQKFLSSQLPKIQRIRDMITQSGRDIRLAVDGGIDASTAP 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++AGAD+L+ GS+ + +K YA + L+
Sbjct: 189 LAIEAGADVLIAGSAVYGKK---DYAAAIAALR 218
>gi|160880616|ref|YP_001559584.1| ribulose-phosphate 3-epimerase [Clostridium phytofermentans ISDg]
gi|160429282|gb|ABX42845.1| Ribulose-phosphate 3-epimerase [Clostridium phytofermentans ISDg]
Length = 220
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 140/204 (68%), Gaps = 4/204 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSILAADFS LGE I +AGA +H DVMDG FVP+ISFG VI SLR S VF
Sbjct: 3 HLSPSILAADFSALGENIRKAEEAGATYLHLDVMDGNFVPSISFGMPVITSLRDKSSMVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +I A AG DIIT H ES H+ R++ + +GKK GVA+NP TP+++
Sbjct: 63 DVHLMIEEPIRYIEDFAKAGADIITVHAESCKHLHRTVTAVKELGKKVGVALNPSTPLSV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
L+ ++ E+DM+LIM+VNPGFGGQ+ I ST+ K+R K + +I +EVDGGVT N+
Sbjct: 123 LDYILPELDMVLIMSVNPGFGGQKFIPSTLQKLRDLKKMANDLNVTIDIEVDGGVTLENV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEI 207
+++AGA++LV G+S F +G+I
Sbjct: 183 SEIMEAGANVLVAGTSVF--RGDI 204
>gi|170761808|ref|YP_001787817.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A3 str. Loch
Maree]
gi|169408797|gb|ACA57208.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A3 str. Loch
Maree]
Length = 216
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 142/206 (68%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A AG DII+ H E+ HI R++ I + G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFAKAGADIISVHYEADKHIDRTINYIKSFGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ +AL K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVRALSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
IK + GADLLV GS+ F + GEI
Sbjct: 182 IKEIADCGADLLVAGSAVF-KNGEIE 206
>gi|225181335|ref|ZP_03734779.1| Ribulose-phosphate 3-epimerase [Dethiobacter alkaliphilus AHT 1]
gi|225167916|gb|EEG76723.1| Ribulose-phosphate 3-epimerase [Dethiobacter alkaliphilus AHT 1]
Length = 217
Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 145/214 (67%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADFSRL +++ + + GA +HFDVMDG FVPN++ G V++SLR+ +D
Sbjct: 2 VKIAPSLLSADFSRLADDVKKVEEGGAHWLHFDVMDGHFVPNLTMGPQVVKSLRNKTDLY 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + ++++ A AG D IT E+ H+ R L+ +G K GVA+NP TP++
Sbjct: 62 FDVHLMIENPENYLEAFAKAGADSITVSAEACTHLHRILQMTRGLGVKAGVALNPATPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E V+D++D++LIM+VNPGFGGQ+ I + +PKIR + ++G+R + ++VDGG+ +
Sbjct: 122 VIEYVLDDVDLVLIMSVNPGFGGQKFIPAAVPKIRALREMLGERPVDIQVDGGINAETAP 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGA +LV G++ F + I K L KK
Sbjct: 182 VVRDAGASVLVAGTAVFGEPDVIQAIKMLQTEKK 215
>gi|328950440|ref|YP_004367775.1| ribulose-phosphate 3-epimerase [Marinithermus hydrothermalis DSM
14884]
gi|328450764|gb|AEB11665.1| ribulose-phosphate 3-epimerase [Marinithermus hydrothermalis DSM
14884]
Length = 223
Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 145/218 (66%), Gaps = 4/218 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+ADF+RLGEE+ AGA +IH DVMDG FVPN++ G V+ +LR +
Sbjct: 3 KIEIAPSILSADFARLGEEVREAEAAGADRIHVDVMDGRFVPNLTMGVVVVEALRRVTRL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLMI + + A AG D++ HPE++PH R+++ I +G + G+A+NP TP+
Sbjct: 63 PLEVHLMIVEPERFLEAFARAGADLLIVHPEATPHAHRAIQQIKELGVRAGLAVNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
A ED++ E+D L+MTVNPGFGGQ+ +E ++P++ + +A+ + + +EVDGG+
Sbjct: 123 AWFEDLLPELDQALLMTVNPGFGGQRFLEQSLPRLERLRAMRDRLNPACRIEVDGGINPE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+VQAGA++LV GSS FN + S A+ LN L++S
Sbjct: 183 TAPRVVQAGAEVLVAGSSVFNARA--SVAENLNALRRS 218
>gi|329114270|ref|ZP_08243032.1| Ribulose-phosphate 3-epimerase [Acetobacter pomorum DM001]
gi|326696346|gb|EGE48025.1| Ribulose-phosphate 3-epimerase [Acetobacter pomorum DM001]
Length = 225
Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 142/213 (66%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+RLGEE+S + +AGA +H DVMDG FVPNISFG V+++LR SD FD
Sbjct: 9 IAPSVLAADFTRLGEEVSALKQAGADWVHLDVMDGHFVPNISFGPGVVKALRPCSDLPFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D ++ A AG D I H E+ PH RSL+ I +G K G+ + P TP +
Sbjct: 69 VHLMIAPVDPYLEAFAQAGADQILIHIEAGPHTHRSLQRIRDLGAKPGIVLCPATPPEAI 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+V+D +D++L+MTVNPGFGGQ+ + S +PKIR+ + +I +R I L VDGG+ +
Sbjct: 129 GEVLDLVDIVLVMTVNPGFGGQKFLSSQLPKIRRIREMITQSERDIRLAVDGGIDASTAP 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+L+ GS+ + +K YA + L+
Sbjct: 189 LAIDAGADVLIAGSAVYGKK---DYAAAIAALR 218
>gi|170755632|ref|YP_001782045.1| ribulose-phosphate 3-epimerase [Clostridium botulinum B1 str. Okra]
gi|169120844|gb|ACA44680.1| ribulose-phosphate 3-epimerase [Clostridium botulinum B1 str. Okra]
Length = 216
Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 142/206 (68%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E+ HI R++ I ++G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ KAL K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIKYASEKIKEVKALSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
IK + GADLLV GS+ F + GEI
Sbjct: 182 IKKIADCGADLLVAGSAVF-KNGEIE 206
>gi|153939835|ref|YP_001391798.1| ribulose-phosphate 3-epimerase [Clostridium botulinum F str.
Langeland]
gi|152935731|gb|ABS41229.1| ribulose-phosphate 3-epimerase [Clostridium botulinum F str.
Langeland]
gi|295319824|gb|ADG00202.1| ribulose-phosphate 3-epimerase [Clostridium botulinum F str.
230613]
Length = 216
Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 142/206 (68%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E+ HI R++ I ++G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ KAL K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIKYASEKIKEVKALSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
IK + GADLLV GS+ F + GEI
Sbjct: 182 IKEIADCGADLLVAGSAVF-KNGEIE 206
>gi|302132248|ref|ZP_07258238.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 224
Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V +NI+ + AGAD V GS+ FN
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFN 204
>gi|126730301|ref|ZP_01746112.1| ribulose-phosphate 3-epimerase [Sagittula stellata E-37]
gi|126709034|gb|EBA08089.1| ribulose-phosphate 3-epimerase [Sagittula stellata E-37]
Length = 230
Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 136/199 (68%), Gaps = 1/199 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSIL+ADF+ G EI I GA IH DVMDG FVPN++FG +++ R + +
Sbjct: 6 SVKIAPSILSADFADFGREIQAIEAQGADWIHVDVMDGHFVPNLTFGPPAVKAFRKHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ A+AG DI+T H E+ PH R+L+ I A G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAYAEAGADILTAHVEAGPHTHRTLQAIRAAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E ++D D++ +MTVNPGFGGQ+ I+ T K+R +A+IG R + +E+DGGVT
Sbjct: 126 QAVEHLLDLADLVCVMTVNPGFGGQKFIDMT-GKVRALRAMIGDRPVHIEIDGGVTPETA 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
+V+AGAD+LV GS+ F
Sbjct: 185 PLVVEAGADVLVAGSAVFK 203
>gi|291536610|emb|CBL09722.1| ribulose-phosphate 3-epimerase [Roseburia intestinalis M50/1]
Length = 217
Score = 207 bits (527), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 143/196 (72%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADFSRLGE+I + +AGA+ +H DVMDG FVP+ISFG VIR++R+ +D +FD H
Sbjct: 6 PSILSADFSRLGEQIKELDEAGAQYVHIDVMDGMFVPSISFGMPVIRAIRACTDRIFDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I+ A+AG D+IT H ES H+ R++ I G GVAINP TPV+ +
Sbjct: 66 LMIEEPGRYIDEFAEAGADLITVHAESCRHLDRTIEKIKEKGLLAGVAINPATPVSAISC 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
V++++DM+L+MTVNPGFGGQ+LI T+ K+R+ + ++ ++ + +EVDGGV N++ L
Sbjct: 126 VLEKVDMVLVMTVNPGFGGQKLIPYTVEKVRELRKIVDEKGLKTDIEVDGGVNLSNVEEL 185
Query: 187 VQAGADLLVVGSSFFN 202
+ AGA+++V GS+ F+
Sbjct: 186 MDAGANIIVAGSAIFS 201
>gi|261378741|ref|ZP_05983314.1| ribulose-phosphate 3-epimerase [Neisseria cinerea ATCC 14685]
gi|269144896|gb|EEZ71314.1| ribulose-phosphate 3-epimerase [Neisseria cinerea ATCC 14685]
Length = 227
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 142/206 (68%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 TYRIAPSILSADFARLGEEVANVISAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYACV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EVDGG
Sbjct: 123 YLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEAQSGRHIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI ++ AGAD V GS+ F +
Sbjct: 183 IKTDNIAAVAAAGADTFVAGSAIFGK 208
>gi|148259043|ref|YP_001233170.1| ribulose-phosphate 3-epimerase [Acidiphilium cryptum JF-5]
gi|146400724|gb|ABQ29251.1| ribulose-5-phosphate 3-epimerase [Acidiphilium cryptum JF-5]
Length = 223
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 143/216 (66%), Gaps = 5/216 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PS I PS+LAADF RL EE++ + +AGA +H DVMDG FVPNISFGA V+ +LR ++
Sbjct: 7 PSPIIAPSLLAADFGRLREEVAAVERAGAHWLHLDVMDGHFVPNISFGALVLNALRPHTR 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI+ D ++ A AG D IT H E+ PH+ RSL+TI A+G K GVAINP TP
Sbjct: 67 LAFDVHLMIAPADPYLADFAKAGADHITVHAEAGPHLHRSLQTIRALGLKAGVAINPATP 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ V+D +D++ +MTVNPGFGGQ + +PKI + + ++ + R I +E DGG+ +
Sbjct: 127 AEAVRHVLDLVDIVNVMTVNPGFGGQSFLAGQLPKIAELRRMVTEAGRDIRIETDGGIDA 186
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++AGAD+L+ GS+ F G+ YA + L
Sbjct: 187 ASAPRALEAGADVLIAGSAIF---GKPDYAAAIAAL 219
>gi|187479703|ref|YP_787728.1| ribulose-phosphate 3-epimerase [Bordetella avium 197N]
gi|115424290|emb|CAJ50843.1| ribulose-phosphate 3-epimerase [Bordetella avium 197N]
Length = 241
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 145/221 (65%), Gaps = 7/221 (3%)
Query: 2 TP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
TP + +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 11 TPATTRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPH 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + + A AG DIITFHPE+S H+ R+L I G K G+ NP
Sbjct: 71 VQVPIDVHLMVEPVDEIVPMFAKAGADIITFHPEASRHVDRTLALIRDNGCKAGLVFNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEV 174
TP++ ++ V+D++D++L+M+VNPGFGGQ I +T+ K+RQA+A I G + I LEV
Sbjct: 131 TPLSYMDYVMDKLDIVLLMSVNPGFGGQAFIPATLDKLRQARARIDAWTQAGGQPILLEV 190
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGGV + NI + +AGAD V GS+ F + S K L D
Sbjct: 191 DGGVKTDNIAEIRRAGADTFVAGSAIFGKPDYASVIKTLRD 231
>gi|220928960|ref|YP_002505869.1| ribulose-phosphate 3-epimerase [Clostridium cellulolyticum H10]
gi|219999288|gb|ACL75889.1| ribulose-phosphate 3-epimerase [Clostridium cellulolyticum H10]
Length = 222
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 147/221 (66%), Gaps = 4/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS LG EI I K GA IH DVMDG FVPNI+ G V++ LR Y+D
Sbjct: 2 IKIAPSILSADFSCLGSEIEKIDKNGADIIHIDVMDGHFVPNITIGPGVVKCLRKYTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+S+ D +I A AG DIIT H E++ H+ R+++ I GKK GVA+NP TP+
Sbjct: 62 FDVHLMVSNPDEYIEQFAQAGADIITVHAEATKHLNRTIQIIKNCGKKAGVALNPATPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+ V+ ++DM+LIMTVNPGFGGQ + + KI K ++ + ++ +EVDGG+ N
Sbjct: 122 VLDFVLQDVDMVLIMTVNPGFGGQSYLPHSTKKISDLKNMMIRNTLVADIEVDGGIDVNN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK--GEISYAKRLNDLKKSAL 221
I + +AGA+++V GS+ F Q GE + ++N ++ L
Sbjct: 182 INVVTKAGANVIVAGSAVFKQDNVGEAIRSLKMNSYNRNTL 222
>gi|218768246|ref|YP_002342758.1| putative ribulose-phosphate 3-epimerase [Neisseria meningitidis
Z2491]
gi|121052254|emb|CAM08579.1| putative ribulose-phosphate 3-epimerase [Neisseria meningitidis
Z2491]
gi|316985103|gb|EFV64056.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis H44/76]
gi|319410493|emb|CBY90854.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase;
PPE; R5P3E) [Neisseria meningitidis WUE 2594]
gi|325200125|gb|ADY95580.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis H44/76]
Length = 242
Score = 207 bits (527), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 148/227 (65%), Gaps = 16/227 (7%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 TYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EVDGG
Sbjct: 123 YLLENVLDRLDMVLLMSVNPGFGGQSFIPYTLEKIRQVRAMLDRYEEKSGRRIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ----------KGEISYAKRLN 214
+ + NI + QAGAD V GS+ F + + E+ + RLN
Sbjct: 183 IKTDNIAAAAQAGADTFVAGSAIFGKPDYKAVIDAMRAELEKSGRLN 229
>gi|298485314|ref|ZP_07003406.1| Ribulose-phosphate 3-epimerase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160164|gb|EFI01193.1| Ribulose-phosphate 3-epimerase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 224
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI + R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDESGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|83943667|ref|ZP_00956125.1| ribulose-phosphate 3-epimerase [Sulfitobacter sp. EE-36]
gi|83845347|gb|EAP83226.1| ribulose-phosphate 3-epimerase [Sulfitobacter sp. EE-36]
Length = 229
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 143/221 (64%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSILAADF+ G E I GA +H DVMDG FVPNISFG ++R +
Sbjct: 6 SIKIAPSILAADFANFGAECEAIEAQGADWVHVDVMDGHFVPNISFGPTTCAAIRPHIKG 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ A AG D+IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAFAKAGADVITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
A +E ++D D++ +MTVNPGFGGQ+ I+ + KIR +A+IG R + +E+DGGV
Sbjct: 126 AAVEHLLDVADLVCVMTVNPGFGGQKFIDMS-DKIRTLRAMIGDRPVHIEIDGGVDVNTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
S+ QAGAD+LV GS+ F + G +S Y + + ++ +A
Sbjct: 185 SSVAQAGADVLVAGSAVF-RGGSVSNPAPYGENIRAIRAAA 224
>gi|167767850|ref|ZP_02439903.1| hypothetical protein CLOSS21_02387 [Clostridium sp. SS2/1]
gi|317497156|ref|ZP_07955482.1| ribulose-phosphate 3 epimerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|167710589|gb|EDS21168.1| hypothetical protein CLOSS21_02387 [Clostridium sp. SS2/1]
gi|291558823|emb|CBL37623.1| ribulose-phosphate 3-epimerase [butyrate-producing bacterium SSC/2]
gi|316895566|gb|EFV17722.1| ribulose-phosphate 3 epimerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 218
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 141/196 (71%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADF+ LG ++ KAGAK +H DVMDG FVPNIS G VI+SLR ++++FD H
Sbjct: 7 PSILSADFANLGADVKEAVKAGAKWVHIDVMDGMFVPNISLGLPVIKSLRKETEALFDVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I+ A+AG D+IT H E++ H+ R+++ + A G K GVA+NP TP++ L+
Sbjct: 67 LMIEEPGRYIDDFAEAGADLITLHAEATKHLHRAIQQVKAKGLKVGVALNPATPLSALDY 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSL 186
V++E+DM+LIMTVNPG+GGQ I KI++ +A+I ++ I +EVDGG++++N+ +
Sbjct: 127 VLEELDMVLIMTVNPGYGGQSYIAKMDDKIKELRAIINEKGLDIDIEVDGGISAKNVAHV 186
Query: 187 VQAGADLLVVGSSFFN 202
+ GA++ V GS+ FN
Sbjct: 187 KECGANVFVAGSAVFN 202
>gi|330945653|gb|EGH47134.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 224
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASARDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|89053281|ref|YP_508732.1| ribulose-5-phosphate 3-epimerase [Jannaschia sp. CCS1]
gi|88862830|gb|ABD53707.1| ribulose-5-phosphate 3-epimerase [Jannaschia sp. CCS1]
Length = 226
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 138/198 (69%), Gaps = 1/198 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSILAADF+ G E+ + GA IH DVMDG FVPN++FG ++++LR + +
Sbjct: 6 SIKIAPSILAADFANFGAEVRAVEDQGADWIHIDVMDGHFVPNLTFGPPMVKALRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS +D++I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMISPVDAYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ + +V+D D++ +MTVNPGFGGQ I+ T KI + + +IG R + +E+DGGV ++
Sbjct: 126 SAVAEVLDLCDLVCVMTVNPGFGGQSFIDMT-GKIAELRTMIGDREVHIEIDGGVDAKTA 184
Query: 184 KSLVQAGADLLVVGSSFF 201
+ +AGAD+LV GS+ F
Sbjct: 185 PLVARAGADVLVAGSAVF 202
>gi|296133288|ref|YP_003640535.1| ribulose-phosphate 3-epimerase [Thermincola sp. JR]
gi|296031866|gb|ADG82634.1| ribulose-phosphate 3-epimerase [Thermincola potens JR]
Length = 222
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGE+++ + KAG + +H DVMDG FVPNI+ G V+++LR +S V
Sbjct: 2 VKIAPSILSADFARLGEQVAVVEKAGVEYLHIDVMDGHFVPNITIGPLVVKALRPHSKLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS D ++ A AG DII H E+ H+ RS++ I A+GKK V++NP TP+
Sbjct: 62 FDVHLMISEPDRYVEEFARAGADIIGIHAETCLHLHRSIQNIKALGKKVCVSLNPATPLT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
+E V+ ++DM+L+MTVNPGFGGQ+ I + +PKIR + +I ++I +E+DGG+ +
Sbjct: 122 AIEYVLPDLDMVLLMTVNPGFGGQKFIPAVLPKIRALREMINVLGKNIDIEIDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ +V+ GA++LV GS+ F +
Sbjct: 182 ARQVVEVGANVLVAGSAIFGAE 203
>gi|149377965|ref|ZP_01895691.1| ribulose-phosphate 3-epimerase [Marinobacter algicola DG893]
gi|149357739|gb|EDM46235.1| ribulose-phosphate 3-epimerase [Marinobacter algicola DG893]
Length = 228
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P QI PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNP-FQIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCEALRKH 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I + DAG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDDLIRMFIDAGASYITFHPEASNHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ ++ V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ I R+I LE+DGG
Sbjct: 120 ATPLHYIDHVMDKLDMILLMSVNPGFGGQKFIPGTLDKLREARRRIDASGRNIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V + NI+ + +AGAD V GS+ FN
Sbjct: 180 VKTDNIREIAEAGADTFVAGSAIFN 204
>gi|330963859|gb|EGH64119.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 224
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|150390537|ref|YP_001320586.1| ribulose-phosphate 3-epimerase [Alkaliphilus metalliredigens QYMF]
gi|149950399|gb|ABR48927.1| Ribulose-phosphate 3-epimerase [Alkaliphilus metalliredigens QYMF]
Length = 220
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 147/219 (67%), Gaps = 2/219 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQ+ PSIL+ADF+ L +EI + +AG +H DVMDG FVPNI+ G +I+SL++ +
Sbjct: 2 IQLAPSILSADFANLEQEIKKVEEAGCDMLHIDVMDGHFVPNITLGPPIIKSLKNKTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I +AG DIIT H E+ H+ R+++ I G K VA+NP TP+
Sbjct: 62 FDVHLMIENPDQYIAQFVEAGADIITVHSETCIHLHRTIQLIKGCGIKAAVALNPSTPLV 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E+V++E+DM+L+MTVNPGFGGQ+LI + + KI + K +I +R I ++VDGGV N
Sbjct: 122 MIENVLEELDMVLLMTVNPGFGGQKLIPNMLEKIARLKRMIDERGLKIDIQVDGGVNLEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
IK + +AGA+++V GS+ FN KRL + S L
Sbjct: 182 IKQIAEAGANIIVAGSAIFNSTDIPETVKRLKENASSNL 220
>gi|114797584|ref|YP_762043.1| ribulose-phosphate 3-epimerase [Hyphomonas neptunium ATCC 15444]
gi|114737758|gb|ABI75883.1| ribulose-phosphate 3-epimerase [Hyphomonas neptunium ATCC 15444]
Length = 222
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 144/219 (65%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF++LGEEI I AGA IH DVMDG FVPN++FG VI LR +
Sbjct: 1 MKP-VLISPSILSADFAKLGEEIRAIDAAGADMIHVDVMDGHFVPNLTFGPPVIEKLRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +FD HLMI+ +D I A AG DI+T HPE+ H+ R+++ I A G + GVA+NP
Sbjct: 60 TKKLFDVHLMIAPVDPFIQDFAKAGADILTVHPEAGAHLHRTIQAIRAAGMRPGVALNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGV 178
TP +++E VI +ID++L+M+VNPGFGGQ IES + K+ Q + +I R I LE+DGG+
Sbjct: 120 TPASVIEPVIGDIDLVLVMSVNPGFGGQSFIESQLRKVEQLRRMIDASGRDIILEIDGGL 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + AG +V GS+ F + G +YA + L+
Sbjct: 180 NAETAPRAIAAGVTAIVAGSAVF-KGGPDAYAANIRALR 217
>gi|330812115|ref|YP_004356577.1| ribulose-phosphate 3-epimerase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380223|gb|AEA71573.1| putative ribulose-phosphate 3-epimerase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 224
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D + +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GITAPIDAHLMVSPVDRIVGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMILLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V +NI+ + AGAD V GS+ FN
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFN 204
>gi|304413442|ref|ZP_07394915.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Regiella insecticola
LSR1]
gi|304284285|gb|EFL92678.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Regiella insecticola
LSR1]
Length = 245
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 142/207 (68%), Gaps = 5/207 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + I PSILAA+F+RLGEE + + AGA IHFDVMD +VPN++FG+ V +SLR+Y
Sbjct: 20 MTPFL-IAPSILAANFARLGEETATVLAAGADVIHFDVMDNHYVPNLTFGSMVCQSLRNY 78
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I AG I+FHPE+S HI RSL+ I G K G+A NP
Sbjct: 79 GITAPIDVHLMVKPVDDLIAAFIKAGASSISFHPEASEHIDRSLQLIKDGGCKAGLAFNP 138
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDG 176
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQA+ LI KR I L VDG
Sbjct: 139 ATPLHYLDYVMDKLDVILLMSVNPGFGGQSFIPATLNKLRQARELIDKRGYAEIRLAVDG 198
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQ 203
G+ + NI ++ AGAD+ + GS+ F Q
Sbjct: 199 GINTENIYTVATAGADMFIAGSAIFAQ 225
>gi|330891213|gb|EGH23874.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. mori str.
301020]
Length = 224
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|332528012|ref|ZP_08404046.1| ribulose-phosphate 3-epimerase [Rubrivivax benzoatilyticus JA2]
gi|332112586|gb|EGJ12379.1| ribulose-phosphate 3-epimerase [Rubrivivax benzoatilyticus JA2]
Length = 225
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 138/200 (69%), Gaps = 2/200 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ + AGA IHFDVMD +VPN++FG V ++LR ++++
Sbjct: 3 RIAPSILSADFARLGEEVRAVVAAGADWIHFDVMDNHYVPNLTFGPMVCQALRKHTEAPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ A AG D+++FHP++S H+ R+L+ I A G + G+ NP P+ +
Sbjct: 63 DVHLMVQPVDALATAFAKAGADLVSFHPDASTHVDRTLQLIKAEGCQAGLVFNPAEPLDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
LE VID++D++LIM+VNPGFGGQ I+S + KI +A+ I R I LEVDGG+ NI
Sbjct: 123 LEWVIDKVDLVLIMSVNPGFGGQSFIDSALRKIEKARRTIDASGRDIRLEVDGGIKVDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD V GS+ F Q
Sbjct: 183 RRVADAGADTFVAGSAIFGQ 202
>gi|330980946|gb|EGH79049.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 224
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|99078681|ref|YP_611939.1| ribulose-5-phosphate 3-epimerase [Ruegeria sp. TM1040]
gi|99035819|gb|ABF62677.1| ribulose-5-phosphate 3-epimerase [Ruegeria sp. TM1040]
Length = 226
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 146/223 (65%), Gaps = 6/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 SIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPAAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I A G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRAAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D D+I +MTVNPGFGGQ+ I+ T KIR + +IG R + +E+DGGV
Sbjct: 126 EAVAHLLDLTDLICVMTVNPGFGGQKFIDMTA-KIRSLREMIGDRPVHIEIDGGVDPTTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSALA 222
+V+AGAD+LV GS+ F + G + Y + + ++ +A A
Sbjct: 185 PLVVEAGADVLVAGSAVF-RGGSVEAPEVYGENIRKIRAAANA 226
>gi|83954650|ref|ZP_00963361.1| Pentose-5-phosphate-3-epimerase [Sulfitobacter sp. NAS-14.1]
gi|83840934|gb|EAP80105.1| Pentose-5-phosphate-3-epimerase [Sulfitobacter sp. NAS-14.1]
Length = 229
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 142/221 (64%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSILAADF+ G E I GA +H DVMDG FVPNISFG ++R +
Sbjct: 6 SIKIAPSILAADFANFGAECEAIEAQGADWVHVDVMDGHFVPNISFGPTTCAAIRPHIKG 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI +D +I+ A AG D+IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMIEPVDPYIDAFAKAGADVITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
A +E ++D D++ +MTVNPGFGGQ+ I+ + KIR +A+IG R + +E+DGGV
Sbjct: 126 AAVEHLLDVADLVCVMTVNPGFGGQKFIDMS-DKIRTLRAMIGDRPVHIEIDGGVDVNTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
S+ QAGAD+LV GS+ F + G +S Y + + ++ +A
Sbjct: 185 SSVAQAGADVLVAGSAVF-RGGSVSNPSPYGENIRAIRAAA 224
>gi|28867794|ref|NP_790413.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213967660|ref|ZP_03395807.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato T1]
gi|301381524|ref|ZP_07229942.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
Max13]
gi|302062594|ref|ZP_07254135.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
K40]
gi|28851029|gb|AAO54108.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213927436|gb|EEB60984.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato T1]
gi|330878380|gb|EGH12529.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|331017616|gb|EGH97672.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 224
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|330961048|gb|EGH61308.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 224
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|257483123|ref|ZP_05637164.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289627673|ref|ZP_06460627.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289648992|ref|ZP_06480335.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330868507|gb|EGH03216.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330985781|gb|EGH83884.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331011645|gb|EGH91701.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 224
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|253575481|ref|ZP_04852818.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845128|gb|EES73139.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 227
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 137/202 (67%), Gaps = 2/202 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSILAADFS+LG EI KAGA IH DVMDG FVPNI+ G D+I S+R Y++ F
Sbjct: 5 KLAPSILAADFSKLGSEIEAADKAGADMIHIDVMDGAFVPNITLGPDIIASVRPYTNLAF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +I A AG DIIT E+ H+ R+++ I A G K+GVA++P TP +
Sbjct: 65 DVHLMIEEPQRYIARFAAAGADIITVQAEACRHLHRTIQEIKASGVKSGVALSPATPPDV 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ VI EIDM+L+M+VNPGFGGQ I + + KIR + I +S +EVDGG+ N+
Sbjct: 125 LDYVIGEIDMVLLMSVNPGFGGQSFIPAVLEKIRAVRKTIDALGVSVDIEVDGGIKLSNV 184
Query: 184 KSLVQAGADLLVVGSSFFNQKG 205
+VQAGAD++V GS+ +N +G
Sbjct: 185 GKVVQAGADVIVAGSALYNSEG 206
>gi|254467231|ref|ZP_05080642.1| ribulose-phosphate 3-epimerase [Rhodobacterales bacterium Y4I]
gi|206688139|gb|EDZ48621.1| ribulose-phosphate 3-epimerase [Rhodobacterales bacterium Y4I]
Length = 229
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 139/204 (68%), Gaps = 2/204 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +V
Sbjct: 7 IKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPQAVKAFRPHVKTV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 67 MDVHLMIAPVDPYIDAYADAGADVLTAHFEAGPHIHRTLQAIRGAGMKAGVALNPGTPAE 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E ++D D++ +MTVNPGFGGQ+ I+ T KIR+ +A+IG R + +E+DGGV
Sbjct: 127 AVEHLLDLTDLVCVMTVNPGFGGQKFIDMTA-KIRRLRAMIGDRPVHIEIDGGVDPATAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
+ +AGAD+LV GS+ F + G +S
Sbjct: 186 LVAEAGADVLVAGSAVF-KGGSVS 208
>gi|326790881|ref|YP_004308702.1| ribulose-phosphate 3-epimerase [Clostridium lentocellum DSM 5427]
gi|326541645|gb|ADZ83504.1| ribulose-phosphate 3-epimerase [Clostridium lentocellum DSM 5427]
Length = 220
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 150/218 (68%), Gaps = 3/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSILAADF+ L +EI ++ + GA IH DVMDG FVPNIS GA V +S+R + V
Sbjct: 2 IHLSPSILAADFANLQKEIESVQEGGATYIHVDVMDGAFVPNISLGAPVAKSIRPHIKGV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + ++ AG DI+T H E++ HI R ++ IH +G K G+++NP TPV+
Sbjct: 62 MDVHLMIEAPERYLEDFKVAGADILTVHLEATHHIHRVVQRIHDLGMKAGISLNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSR 181
+LE +I++ID++LIM+VNPGFGGQ+ I ++ K+ Q KAL K + + +EVDGGVT
Sbjct: 122 LLEPIIEDIDLVLIMSVNPGFGGQKFIPYSLEKLMQVKALAQKHNRLDLLIEVDGGVTMD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++++AGA++LV GSS F+ K + AK L +S
Sbjct: 182 NAEAIIKAGANVLVAGSSVFDGKAATANAKAFVKLFES 219
>gi|66047838|ref|YP_237679.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. syringae
B728a]
gi|289676187|ref|ZP_06497077.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. syringae
FF5]
gi|63258545|gb|AAY39641.1| Ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. syringae
B728a]
gi|330901995|gb|EGH33320.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330970828|gb|EGH70894.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 224
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|296448053|ref|ZP_06889957.1| ribulose-phosphate 3-epimerase [Methylosinus trichosporium OB3b]
gi|296254453|gb|EFH01576.1| ribulose-phosphate 3-epimerase [Methylosinus trichosporium OB3b]
Length = 226
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + PSIL+ADF+RLG+E + AGA +H DVMDG FVPNI+FG V+ +LR +
Sbjct: 3 EVLLAPSILSADFARLGDEARAMEAAGADWLHLDVMDGHFVPNITFGPGVVAALRRVTKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ D +I A+AG DIIT H E PH+ R+L+ I A GKK GV++NP T
Sbjct: 63 PLDAHLMIAPADPYIGAFAEAGADIITAHAEGGPHLHRTLQAIRARGKKAGVSLNPATHE 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
L V+D++D+IL+MTV+PGFGGQ I S + KIR + +IG+R I L+VDGGVT
Sbjct: 123 TALVHVLDDVDLILVMTVDPGFGGQSFIHSQLAKIRAIREMIGRRPIRLQVDGGVTPATT 182
Query: 184 KSLVQAGADLLV 195
++V+AGAD LV
Sbjct: 183 TAIVEAGADTLV 194
>gi|330955081|gb|EGH55341.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae Cit 7]
Length = 224
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLGFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|49474331|ref|YP_032373.1| Pentose (ribulose)-5-phosphate-3-epimerase [Bartonella quintana
str. Toulouse]
gi|49239835|emb|CAF26228.1| Pentose (ribulose)-5-phosphate-3-epimerase [Bartonella quintana
str. Toulouse]
Length = 224
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 150/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS+LAADFS+LG+E+ +I AGA +H D+MDG FVPNI+FG +V+++LR
Sbjct: 1 MPRSHLISPSLLAADFSKLGQEVLDIVDAGADWLHLDIMDGHFVPNITFGPNVVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++FD HLMIS D ++ A AG DIIT H E+ PH+ RSL+ I MGKK G+AINP
Sbjct: 61 TRAIFDVHLMISPADPYLEAFAQAGSDIITIHAEAGPHLHRSLQKIKGMGKKAGLAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFG Q I KI++ K++I R I L VDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGEQSFIPEMKDKIKRVKSMIAHRPIDLVVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGA++ V GS+ + + Y R++ L+++A
Sbjct: 181 DTIGITAKAGANVFVAGSAIYKDGNKELYKTRISALRQAA 220
>gi|302185928|ref|ZP_07262601.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. syringae
642]
Length = 224
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLTSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|163744412|ref|ZP_02151772.1| ribulose-phosphate 3-epimerase [Oceanibulbus indolifex HEL-45]
gi|161381230|gb|EDQ05639.1| ribulose-phosphate 3-epimerase [Oceanibulbus indolifex HEL-45]
Length = 229
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 143/221 (64%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSILAADF+ G E I GA +H DVMDG FVPNI+FG + ++R +
Sbjct: 6 SIKIAPSILAADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPAMCAAIRPHIKG 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS +D +I+ A AG D+IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMISPVDPYIDAFAKAGADVITAHVEAGPHIHRTLQAIRGAGVKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ + D++D D+I +MTVNPGFGGQ+ I+ T KIR + +IG R I +E+DGGV +
Sbjct: 126 SAVADILDMTDLICVMTVNPGFGGQKFIDMTA-KIRTLREMIGDRPIHIEIDGGVDPKTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+ QAGAD+LV GS+ F + G +S Y + + ++ +A
Sbjct: 185 PLVAQAGADVLVAGSAAF-KGGSVSNPAPYGENIRAIRAAA 224
>gi|327479290|gb|AEA82600.1| ribulose-phosphate 3-epimerase [Pseudomonas stutzeri DSM 4166]
Length = 224
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 139/206 (67%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+A+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MQP-FAIAPSILSANFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVKPVDRMIGDFLEAGATYITFHPEASEHIDRSLQLIKDGGAKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V +NI+ + AGAD V GS+ FNQ
Sbjct: 180 VNPKNIREIAAAGADTFVAGSAIFNQ 205
>gi|84390814|ref|ZP_00991506.1| ribulose-phosphate 3-epimerase [Vibrio splendidus 12B01]
gi|84376617|gb|EAP93494.1| ribulose-phosphate 3-epimerase [Vibrio splendidus 12B01]
Length = 224
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDSIVPEFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPATPLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI + R I LE+DGGV NI
Sbjct: 126 LDYILDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDESGRDIRLEIDGGVNVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FNQ
Sbjct: 186 REIAEAGADMFVAGSAIFNQ 205
>gi|182678010|ref|YP_001832156.1| ribulose-phosphate 3-epimerase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633893|gb|ACB94667.1| Ribulose-phosphate 3-epimerase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 225
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 151/221 (68%), Gaps = 2/221 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF++LGEE+ I +AGA +H DVMDG FVPNI+ G ++ +LR +
Sbjct: 1 MNP-LAIAPSILSADFAKLGEEVKAIAEAGADWVHVDVMDGHFVPNITIGPAIVAALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMI+ D ++ A+AG D+I+ H E+ PH+ RSL+ I A+GK+ GV +NP
Sbjct: 60 TSLCFDVHLMIAPCDPYLAAFAEAGADLISVHAEAGPHLHRSLQAIKALGKQAGVVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPVA + V+D +D++L+M+VNPGFGGQ I S I K+ + + LIG+R I +EVDGG+
Sbjct: 120 TPVAHVAHVLDLVDLVLVMSVNPGFGGQAFIPSAIGKVAELRQLIGERPIRIEVDGGINP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +V+AGAD LV GS+ F + G Y + +++ AL
Sbjct: 180 ETARQVVEAGADTLVAGSAVF-KGGPDHYRTNIANIRAGAL 219
>gi|218710785|ref|YP_002418406.1| ribulose-phosphate 3-epimerase [Vibrio splendidus LGP32]
gi|218323804|emb|CAV20161.1| Ribulose-phosphate 3-epimerase [Vibrio splendidus LGP32]
Length = 251
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 33 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 92
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 93 DVHLMVKPVDSIVPEFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPATPLSC 152
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI + R I LE+DGGV NI
Sbjct: 153 LDYILDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDESGRDIRLEIDGGVKVDNI 212
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FNQ
Sbjct: 213 REIAEAGADMFVAGSAIFNQ 232
>gi|323489541|ref|ZP_08094768.1| ribulose-phosphate 3-epimerase [Planococcus donghaensis MPA1U2]
gi|323396672|gb|EGA89491.1| ribulose-phosphate 3-epimerase [Planococcus donghaensis MPA1U2]
Length = 221
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 146/217 (67%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSILAADF++LGEE+ + KAGA IH DVMDG FVPNISFGA V+ ++R +
Sbjct: 2 IKIAPSILAADFAKLGEEVVEVEKAGADWIHVDVMDGHFVPNISFGAIVLNAIRPLTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I AG D IT H E+ PH+ R+++ I + G K GV +NP TP+
Sbjct: 62 MDVHLMIENPDLYIEEFGKAGADYITVHVEACPHLHRTIQLIRSFGVKPGVVLNPHTPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ ++++ID++L MTVNPGFGGQ+ I S +PK++Q +I ++ SI +E+DGG+
Sbjct: 122 TIQHILEDIDLVLFMTVNPGFGGQKFIHSVVPKVKQLSDIIKEKELSIEIEIDGGINEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I + +AGA + V GS+ +++K A+ L ++K+
Sbjct: 182 IVACAEAGATVFVAGSAIYSKK---DRAEALQAIRKA 215
>gi|269120652|ref|YP_003308829.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268614530|gb|ACZ08898.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 211
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 146/213 (68%), Gaps = 6/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PS+LAADFS L EE+ ++ KAGA IH D+MDG FVPNISFGA VI+ LR S V
Sbjct: 2 IKVAPSVLAADFSILKEELVSLEKAGADYIHLDIMDGNFVPNISFGAPVIKELRKCSKLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + +I +AG DIIT H ES+ H+ R++ I + G K GV +NP TPV
Sbjct: 62 FDVHLMVEMPERYIEDFVNAGADIITVHVESTKHLDRTIELIKSYGIKAGVTLNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ +I+++DM+L+M+VNPGFGGQ IE ++ KI++ K + + + +EVDGG+T K
Sbjct: 122 SLKYIINKVDMVLVMSVNPGFGGQSFIEYSLDKIKEIKNM--RPDVDIEVDGGITDITAK 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+++AGA++LV GS FN Y ++++ L+
Sbjct: 180 RVIEAGANVLVAGSYVFNG----DYKEKIDSLR 208
>gi|187934394|ref|YP_001885421.1| ribulose-phosphate 3-epimerase [Clostridium botulinum B str. Eklund
17B]
gi|187722547|gb|ACD23768.1| ribulose-phosphate 3-epimerase [Clostridium botulinum B str. Eklund
17B]
Length = 214
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 145/199 (72%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE++ I KAGA+ IH DVMDG FVPNISFG +I+S+R+ ++ +
Sbjct: 2 VKIAPSILSADFSKLGEDVERIDKAGAEFIHIDVMDGSFVPNISFGFPIIKSIRNRTEKI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I+ +AG D+IT H E+ HI R+++ I + GKK +A+NP TP
Sbjct: 62 FDVHLMIENPSKYIDDFIEAGADLITVHYEADRHIDRTIQYIKSKGKKAAIALNPGTPTM 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+L+D+I ++DM+LIM+VNPGFGGQ+ I ++ KI++ K + + SL +VDGGV N
Sbjct: 122 VLKDLISQLDMVLIMSVNPGFGGQKFIPYSLEKIKEVKEMSKHLNPSLLIQVDGGVDLSN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
I +V+AGA+++V GS+ F
Sbjct: 182 ISEVVEAGANVIVAGSAVF 200
>gi|311747261|ref|ZP_07721046.1| ribulose-phosphate 3-epimerase [Algoriphagus sp. PR1]
gi|126578972|gb|EAZ83136.1| ribulose-phosphate 3-epimerase [Algoriphagus sp. PR1]
Length = 219
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 142/216 (65%), Gaps = 2/216 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSILAADF+ L E+ + + A IH D+MDG FVPNISFG V ++++ +++
Sbjct: 2 SLLIAPSILAADFANLQTEVEMLNSSSADYIHVDIMDGVFVPNISFGIPVTQAIKKHAEK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D ++ DAG DII+ H E+ PH+ RSL+ I A+G K GVAINP T +
Sbjct: 62 PLDVHLMIVEPDRYLEAFRDAGADIISVHYEACPHLHRSLQAIKALGAKAGVAINPHTSI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+L+DVI +ID++ +M+VNPGFGGQ+ IE+T KI + K LI + S +E+DGGV +
Sbjct: 122 DLLKDVIQDIDLVCMMSVNPGFGGQKFIENTYDKIARLKDLILSKGASTKIEIDGGVNIQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N L++AGAD+LV GS FN I K L +K
Sbjct: 182 NAPKLIEAGADVLVAGSFVFNSPQPIETIKELKSIK 217
>gi|319649615|ref|ZP_08003771.1| ribulose-phosphate 3-epimerase [Bacillus sp. 2_A_57_CT2]
gi|317398777|gb|EFV79459.1| ribulose-phosphate 3-epimerase [Bacillus sp. 2_A_57_CT2]
Length = 216
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 139/202 (68%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGEEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSADFSKLGEEIKDVERGGADYIHVDVMDGHFVPNITIGPLIVDAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A+AG D IT H E+ H+ R++ I + G K GV +NP TPV
Sbjct: 62 LDVHLMIENPDNYIEAFANAGADYITVHAEACKHLHRTIHFIKSFGVKAGVVLNPATPVN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E +ID+IDM+L+MTVNPGFGGQ+ I +PKI+ K + + +I +EVDGGV
Sbjct: 122 MIEHIIDDIDMVLLMTVNPGFGGQKFIPGVLPKIKAVKEMADAKGLNIEIEVDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA++LV GS+ +NQK
Sbjct: 182 AQLCIEAGANVLVAGSAIYNQK 203
>gi|229826172|ref|ZP_04452241.1| hypothetical protein GCWU000182_01544 [Abiotrophia defectiva ATCC
49176]
gi|229789042|gb|EEP25156.1| hypothetical protein GCWU000182_01544 [Abiotrophia defectiva ATCC
49176]
Length = 224
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 141/205 (68%), Gaps = 4/205 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSILAADF +L E+I + GAK +H DVMDG FVP+ISFG VI+SLR YS VFD H
Sbjct: 7 PSILAADFGKLAEQIKITEENGAKYLHLDVMDGAFVPSISFGMPVIKSLRKYSGQVFDVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI S + ++ AG DIIT H E++ H+ R++ I +G K GV++NP TP++ +E
Sbjct: 67 LMIESPERYLEDFKAAGADIITVHAEATKHLHRTVTRIKELGLKAGVSLNPATPLSAIEL 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
V+ E+DM+LIM+VNPGFGGQ+ I T+ KIR+ + + I +EVDGGV N+ LV+
Sbjct: 127 VLSEVDMVLIMSVNPGFGGQKFIPFTLDKIRKLREM--SPDIDIEVDGGVNKDNVAELVK 184
Query: 189 AGADLLVVGSSFFNQKGEISYAKRL 213
AGA++LV G++ F G+I+ +L
Sbjct: 185 AGANVLVAGTAVFG--GDIAENTKL 207
>gi|303256154|ref|ZP_07342170.1| ribulose-phosphate 3-epimerase [Burkholderiales bacterium 1_1_47]
gi|331000400|ref|ZP_08324076.1| ribulose-phosphate 3-epimerase [Parasutterella excrementihominis
YIT 11859]
gi|302860883|gb|EFL83958.1| ribulose-phosphate 3-epimerase [Burkholderiales bacterium 1_1_47]
gi|329571933|gb|EGG53610.1| ribulose-phosphate 3-epimerase [Parasutterella excrementihominis
YIT 11859]
Length = 231
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 145/218 (66%), Gaps = 9/218 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ LG+E+ ++ AGA IHFDVMD +VPN++ G V +++R Y+++
Sbjct: 11 RIAPSILSADFANLGKEVQDVIAAGADWIHFDVMDNHYVPNLTVGPMVCKAIRPYTEAPI 70
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++D + + A AG +IITFHPE+S H+ R+LR I G K G+A+NP T +
Sbjct: 71 DVHLMVEAVDEIVPLFAKAGANIITFHPEASRHVDRTLRLIRDCGCKAGLALNPATSLEY 130
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL------IGKRSISLEVDGGVT 179
L +D IDM+L+M+VNPGFGGQ I +TI K+++ ++L + R + LEVDGGV
Sbjct: 131 LHYELDNIDMVLLMSVNPGFGGQSFIPTTIGKLQECRSLLDSYAEVSGRKVLLEVDGGVK 190
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI+ + AGAD V GS+ FN E Y ++D++
Sbjct: 191 KSNIREIAAAGADTFVAGSAIFN---EADYKAVIDDMR 225
>gi|182420437|ref|ZP_02951656.1| ribulose-phosphate 3-epimerase [Clostridium butyricum 5521]
gi|237668736|ref|ZP_04528720.1| ribulose-phosphate 3-epimerase [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182375723|gb|EDT73323.1| ribulose-phosphate 3-epimerase [Clostridium butyricum 5521]
gi|237657084|gb|EEP54640.1| ribulose-phosphate 3-epimerase [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 214
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 147/206 (71%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE++ +I K GA+ IH DVMDG FVPNISFG +I+S+R +D V
Sbjct: 2 VKIAPSILSADFSKLGEDVKSIDKGGAEFIHIDVMDGSFVPNISFGFPIIKSIRKITDKV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I+ +AG D+IT H E+ HI R++ I + GK GVA+NP TPV+
Sbjct: 62 FDVHLMIDNPSHYIDDFIEAGADLITVHYEADRHIDRTINYIKSKGKMAGVALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+L+++I +DM+LIM+VNPGFGGQ+ I ++ KI + K L K + L +VDGG+ N
Sbjct: 122 VLKNLIPNLDMVLIMSVNPGFGGQKFIPYSLDKINEVKQLSEKLNPELLIQVDGGIGCGN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
K ++ AGA++LV GS+ FN G++S
Sbjct: 182 AKEVIDAGANVLVAGSAVFNG-GDVS 206
>gi|86147333|ref|ZP_01065647.1| ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
gi|85834898|gb|EAQ53042.1| ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
Length = 224
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDSIVPEFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPATPLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI + R I LE+DGGV NI
Sbjct: 126 LDYILDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FNQ
Sbjct: 186 REIAEAGADMFVAGSAIFNQ 205
>gi|160896171|ref|YP_001561753.1| ribulose-phosphate 3-epimerase [Delftia acidovorans SPH-1]
gi|160361755|gb|ABX33368.1| Ribulose-phosphate 3-epimerase [Delftia acidovorans SPH-1]
Length = 227
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 149/230 (64%), Gaps = 12/230 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLG+E+ N+ +GA IHFDVMD +VPN++FG + +L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGDEVKNVIASGADWIHFDVMDNHYVPNLTFGPMICEALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM+S +D A AG D I+FHP+++ H+ RS++ I A G K G
Sbjct: 61 AKTPDGQPVPIDVHLMVSPVDELATAFAKAGADYISFHPDATAHVHRSIQNIRAQGAKPG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
+ NP P+ +L+ VID+ID+IL+M+VNPGFGGQ I+ST+ KI A+ I R I L
Sbjct: 121 LVFNPAAPLDVLDWVIDDIDLILLMSVNPGFGGQSFIDSTLRKIEAARKRIEASGRDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
EVDGG+ NI+ + AGAD V GS+ F G+ Y K + D + ALA
Sbjct: 181 EVDGGIKETNIRRVADAGADTFVAGSAIF---GKPDY-KAVIDAMRGALA 226
>gi|226949855|ref|YP_002804946.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A2 str.
Kyoto]
gi|226842579|gb|ACO85245.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A2 str.
Kyoto]
Length = 216
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 141/206 (68%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E+ HI R++ I ++G K VA+NP T ++
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ K L K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKVLSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
IK + GADLLV GS+ F + GEI
Sbjct: 182 IKEIADCGADLLVAGSAVF-KNGEIE 206
>gi|254510559|ref|ZP_05122626.1| ribulose-phosphate 3-epimerase [Rhodobacteraceae bacterium KLH11]
gi|221534270|gb|EEE37258.1| ribulose-phosphate 3-epimerase [Rhodobacteraceae bacterium KLH11]
Length = 229
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 134/199 (67%), Gaps = 1/199 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 SIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS +D +I ADAG D++T H E+ PH R+L+ I A G K G+A+NP TP
Sbjct: 66 VMDVHLMISPVDPYIQAYADAGADVLTAHVEAGPHSHRTLQAIRAAGMKAGIALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E ++D D+I +MTVNPGFGGQ+ I+ T KI + +A+IG R I +E+DGGV +
Sbjct: 126 EAVEHLLDLTDLICVMTVNPGFGGQKFIDMTA-KISRLRAMIGDRPIHIEIDGGVDPKTA 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ AGAD+LV GS+ F
Sbjct: 185 PLVAAAGADVLVAGSAVFK 203
>gi|238021290|ref|ZP_04601716.1| hypothetical protein GCWU000324_01189 [Kingella oralis ATCC 51147]
gi|237868270|gb|EEP69276.1| hypothetical protein GCWU000324_01189 [Kingella oralis ATCC 51147]
Length = 224
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 139/203 (68%), Gaps = 6/203 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + +LR ++ +
Sbjct: 4 RIAPSILSADFARLGEEVRNVIAAGADMIHFDVMDNHYVPNLTFGPMICAALRPHTSAPI 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +D I AG DIITFHPE+S H+ RSL I GK+ G+ +NP T +A+
Sbjct: 64 DVHLMIEPVDDMIGAFIKAGADIITFHPEASRHVDRSLSLIKDAGKQAGLVLNPATSIAV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGVT 179
LE+V+D++DM+L+M+VNPGFGGQ+ I T+ K+RQ +AL+ R I +EVDGG+
Sbjct: 124 LENVLDKLDMVLLMSVNPGFGGQKFIPHTLEKLRQTRALLDAYEQQSGRRIRIEVDGGIK 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
NI + AGAD V GS+ F+
Sbjct: 184 VDNIAAAAAAGADTFVAGSAIFD 206
>gi|168180615|ref|ZP_02615279.1| ribulose-phosphate 3-epimerase [Clostridium botulinum NCTC 2916]
gi|182668542|gb|EDT80521.1| ribulose-phosphate 3-epimerase [Clostridium botulinum NCTC 2916]
Length = 216
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 141/206 (68%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E+ HI R++ I ++G K VA+NP T ++
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEADKHIDRTINYIKSLGIKVAVALNPGTSIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ K L K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKVLSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
IK + GADLLV GS+ F + GEI
Sbjct: 182 IKEIADCGADLLVAGSAVF-KNGEIE 206
>gi|84500485|ref|ZP_00998734.1| Pentose-5-phosphate-3-epimerase [Oceanicola batsensis HTCC2597]
gi|84391438|gb|EAQ03770.1| Pentose-5-phosphate-3-epimerase [Oceanicola batsensis HTCC2597]
Length = 229
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 133/199 (66%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+ADF+ G EI + GA IH DVMDG FVPN++FG +++++R + +
Sbjct: 6 NLKIAPSILSADFANFGAEIDAVEAQGADWIHVDVMDGHFVPNLTFGPPLVKAIRKHVRT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIEAFADAGADVLTAHVEAGPHIHRTLQAIKGAGMKAGVALNPATPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D D++ +MTVNPGFGGQ I S I K+RQ + +IG R I +E+DGG+T
Sbjct: 126 EAVRHLLDLTDLVCVMTVNPGFGGQSFIHSQIDKVRQLREMIGDRPIHIEIDGGITPATA 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ + GAD+LV GS+ F
Sbjct: 186 PLMREVGADVLVAGSAVFK 204
>gi|323494818|ref|ZP_08099915.1| ribulose-phosphate 3-epimerase [Vibrio brasiliensis LMG 20546]
gi|323310926|gb|EGA64093.1| ribulose-phosphate 3-epimerase [Vibrio brasiliensis LMG 20546]
Length = 223
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 140/200 (70%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ + A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDNIVPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++DMIL+M+VNPGFGGQ I +T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEYIMDKVDMILLMSVNPGFGGQSFIPNTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K + +AGAD+ V GS+ FNQ
Sbjct: 186 KEIAEAGADMFVAGSAIFNQ 205
>gi|148380456|ref|YP_001254997.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. ATCC
3502]
gi|153931671|ref|YP_001384679.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. ATCC
19397]
gi|153936705|ref|YP_001388200.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. Hall]
gi|148289940|emb|CAL84053.1| putative ribulose-phosphate 3-epimerase [Clostridium botulinum A
str. ATCC 3502]
gi|152927715|gb|ABS33215.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. ATCC
19397]
gi|152932619|gb|ABS38118.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. Hall]
gi|322806769|emb|CBZ04338.1| ribulose-phosphate 3-epimerase [Clostridium botulinum H04402 065]
Length = 216
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 140/206 (67%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E HI R++ I ++G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEGDKHIDRTINYIKSLGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ K L K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKVLSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
IK + GADLLV GS+ F + GEI
Sbjct: 182 IKEIADCGADLLVAGSAVF-KNGEIE 206
>gi|332292551|ref|YP_004431160.1| ribulose-phosphate 3-epimerase [Krokinobacter diaphorus 4H-3-7-5]
gi|332170637|gb|AEE19892.1| ribulose-phosphate 3-epimerase [Krokinobacter diaphorus 4H-3-7-5]
Length = 220
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 136/212 (64%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L +I I + A H D+MDG FVPNISFG V+R + ++ D
Sbjct: 6 IAPSILAADFANLQRDIEMINASEADWFHIDIMDGVFVPNISFGMPVLRDIAKHAKKTID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ AD G +I+T H E+ H+ R+L+ I A G K GVA+NP TPV+ L
Sbjct: 66 VHLMIVDPDRYVQTFADLGANILTVHYEACTHLHRTLQVIKAAGMKAGVALNPHTPVSHL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
EDVI +ID++ +M+VNPGFGGQQ IE+T K+ KALI K++ +E+DGGV+ +N
Sbjct: 126 EDVIQDIDLVCMMSVNPGFGGQQFIENTYDKVAALKALITKKNAPTLIEIDGGVSDKNAA 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LVQAGAD+LV GS F K L ++
Sbjct: 186 QLVQAGADVLVAGSFIFKSSNPTETIKELKNI 217
>gi|89889345|ref|ZP_01200856.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Flavobacteria bacterium BBFL7]
gi|89517618|gb|EAS20274.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Flavobacteria bacterium BBFL7]
Length = 221
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 137/217 (63%), Gaps = 2/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L ++ I ++ A H D+MDG FVPNISFG V+R + ++ D
Sbjct: 5 IAPSVLAADFANLQRDVEMINRSEADWFHIDIMDGVFVPNISFGMPVLRDIAKHATKTID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI D ++ AD GCDI+T H E+ H+ R+L+ I + G K GVA+NP T V +L
Sbjct: 65 CHLMIVDPDRYVKTFADLGCDILTVHYEACTHLHRTLQLIKSHGMKAGVALNPHTSVHLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
DVI +IDM+ +M+VNPGFGGQ IE+T KI Q K +I + +E+DGGVT +N K
Sbjct: 125 SDVIQDIDMVCLMSVNPGFGGQSFIENTYDKITQLKKIIDFKGCDTLIEIDGGVTDKNAK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
LV AGAD+LV GS F +++ L + A+
Sbjct: 185 QLVDAGADVLVAGSYVFKSSDQVATIAGLKSMVNPAI 221
>gi|313668359|ref|YP_004048643.1| ribulose-phosphate 3-epimerase [Neisseria lactamica ST-640]
gi|313005821|emb|CBN87275.1| putative ribulose-phosphate 3-epimerase [Neisseria lactamica
020-06]
Length = 227
Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 141/206 (68%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 AYRIAPSILSADFARLGEEVANVISAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCRAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ R I++EVDGG
Sbjct: 123 YLLENVLDRLDMVLLMSVNPGFGGQGFIPHTLEKIRRVRAMLDAYEAQSGRHIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI ++ AGAD V GS+ F +
Sbjct: 183 IKTDNIAAVAAAGADTFVAGSAIFGK 208
>gi|71737951|ref|YP_272946.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558504|gb|AAZ37715.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326023|gb|EFW82081.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320332042|gb|EFW87978.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881737|gb|EGH15886.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 224
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGAIYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|34763687|ref|ZP_00144612.1| Ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886577|gb|EAA23792.1| Ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 215
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTNGIKIAPSILSSDFSKLGEEVVAIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDKPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RADIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK V AGA++ V GS F+ +Y +R++ LK A
Sbjct: 179 ETIKVCVDAGANIFVAGSYVFSG----NYKERIDLLKIKA 214
>gi|221070088|ref|ZP_03546193.1| Ribulose-phosphate 3-epimerase [Comamonas testosteroni KF-1]
gi|220715111|gb|EED70479.1| Ribulose-phosphate 3-epimerase [Comamonas testosteroni KF-1]
Length = 226
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 151/227 (66%), Gaps = 11/227 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + ++L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S ++ D HLM+ +D A AG D I+FHP++S H+ RS++ I + G K G
Sbjct: 61 SVTLDGKPVPIDVHLMVQPVDDLATAFAKAGADYISFHPDASQHVHRSIQNIKSHGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
+ NP TP+ +L+ VI++ID+IL+M+VNPGFGGQ I+ST+ K+ A+ I + I L
Sbjct: 121 LVFNPATPLDVLDWVIEDIDLILLMSVNPGFGGQSFIDSTLRKVEAARKRIEASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
EVDGG+ NI+++ AGAD V GS+ F G+ Y ++ ++K+
Sbjct: 181 EVDGGIKEANIRAVADAGADTFVAGSAIF---GKPDYKAVIDTMRKN 224
>gi|163741772|ref|ZP_02149162.1| ribulose-phosphate 3-epimerase [Phaeobacter gallaeciensis 2.10]
gi|161384945|gb|EDQ09324.1| ribulose-phosphate 3-epimerase [Phaeobacter gallaeciensis 2.10]
Length = 229
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 146/221 (66%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 SIKIAPSILSADFANFGQEIQTIESQGADWVHIDVMDGHFVPNLTFGPMAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I A G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAYADAGADVLTAHIEAGPHIHRTLQAIRAAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D D+I +MTVNPGFGGQ+ I+ T KIR +++IG R + +E+DGGV
Sbjct: 126 EAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-SKIRSLRSMIGDRPVHIEIDGGVDPSTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+ +AGAD+LV GS+ F + G ++ Y + +++ +A
Sbjct: 185 PLVAEAGADVLVAGSAVF-KGGSVNDPDVYGANIRNIRDAA 224
>gi|237741656|ref|ZP_04572137.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 4_1_13]
gi|256844980|ref|ZP_05550438.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_36A2]
gi|294785733|ref|ZP_06751021.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_27]
gi|229429304|gb|EEO39516.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 4_1_13]
gi|256718539|gb|EEU32094.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_36A2]
gi|294487447|gb|EFG34809.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_27]
Length = 215
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA +H DVMDG FVPN++FG +I+ +R
Sbjct: 1 MTNGIKIAPSILSSDFSKLGEEVVAIDKAGADYVHIDVMDGQFVPNLTFGPPIIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDKPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFISAVVEKIKAIKKM--RADIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK V AGA++ V GS F+ +Y +R++ LK A
Sbjct: 179 ETIKVCVDAGANIFVAGSYVFSG----NYKERIDLLKIKA 214
>gi|317129253|ref|YP_004095535.1| ribulose-phosphate 3-epimerase [Bacillus cellulosilyticus DSM 2522]
gi|315474201|gb|ADU30804.1| ribulose-phosphate 3-epimerase [Bacillus cellulosilyticus DSM 2522]
Length = 218
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 140/202 (69%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+A+FS+LGEEI ++ K GA IH DVMDG FVPNI+ G+ V+ ++R +
Sbjct: 2 IKVAPSILSANFSKLGEEIIDVEKGGADYIHIDVMDGHFVPNITMGSLVVNAIRPLTKLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D I A AG DII+ H E++PH+ R+++ I +G K GV +NP TP++
Sbjct: 62 LDVHLMIENPDLFIEDFAKAGADIISVHVEATPHLHRTIQHIKDLGVKPGVVLNPATPIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
L +I+++D+IL+MTVNPGFGGQ I S IPKI Q K L+ K + I +EVDGGV
Sbjct: 122 SLYHIIEDVDLILLMTVNPGFGGQSFIPSVIPKIVQVKELVSKVEKDIDIEVDGGVNPDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA++LV GS+ +N K
Sbjct: 182 ARQCIEAGANVLVAGSAIYNSK 203
>gi|255065912|ref|ZP_05317767.1| ribulose-phosphate 3-epimerase [Neisseria sicca ATCC 29256]
gi|255049823|gb|EET45287.1| ribulose-phosphate 3-epimerase [Neisseria sicca ATCC 29256]
Length = 227
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 148/225 (65%), Gaps = 9/225 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MNHNFRIAPSILSADFARLGEEVTKVIEAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I G + G+ +NP
Sbjct: 61 ATVPIDVHLMVEPVDDLIQAFAKAGASIITFHPEASRHIDRSLSLIKDAGCQAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EV
Sbjct: 121 TPAYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEAQSGRHIAIEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
DGG+ + NI ++ AGAD V GS+ F G+ Y ++ ++K
Sbjct: 181 DGGIKTDNIAAVAAAGADTFVAGSAIF---GKPDYKAVIDAMRKE 222
>gi|209696132|ref|YP_002264062.1| ribulose-phosphate 3-epimerase [Aliivibrio salmonicida LFI1238]
gi|208010085|emb|CAQ80410.1| ribulose-phosphate 3-epimerase [Aliivibrio salmonicida LFI1238]
Length = 225
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 147/214 (68%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + +GA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVDKVLASGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDSIVPEFAKAGATMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPATPLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I ST+ K+R + LI R I LE+DGGV NI
Sbjct: 126 LDYILDKVDMILLMSVNPGFGGQSFIPSTLDKLRAVRKLIDDSGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD+ V GS+ FNQ +Y + +++++
Sbjct: 186 REIAEAGADMFVAGSAIFNQP---NYKEVIDEMR 216
>gi|88800167|ref|ZP_01115736.1| ribulose-phosphate 3-epimerase [Reinekea sp. MED297]
gi|88777148|gb|EAR08354.1| ribulose-phosphate 3-epimerase [Reinekea sp. MED297]
Length = 222
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V ++LR++ ++
Sbjct: 6 IAPSILSADFARLGEEVDQVIAAGADWVHFDVMDNHYVPNLTIGPMVCKALRNHGVNAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I +AG +ITFHPE S HI RSL+ I G K G+ NP TP+
Sbjct: 66 DVHLMVSPVDRLIGDFVEAGASMITFHPEGSEHIDRSLQLIKDAGLKAGLVFNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D IDMILIM+VNPGFGGQ I S + K+R+A+ I R I LEVDGGV NI
Sbjct: 126 LDYVMDRIDMILIMSVNPGFGGQSFIPSALDKLREARQRIEASGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + QAGAD V GS+ FN YA + D++
Sbjct: 186 REIAQAGADAFVAGSAIFNAS---DYAGVIQDMR 216
>gi|254000217|ref|YP_003052280.1| ribulose-phosphate 3-epimerase [Methylovorus sp. SIP3-4]
gi|313202183|ref|YP_004040841.1| ribulose-phosphate 3-epimerase [Methylovorus sp. MP688]
gi|253986896|gb|ACT51753.1| ribulose-phosphate 3-epimerase [Methylovorus sp. SIP3-4]
gi|312441499|gb|ADQ85605.1| ribulose-phosphate 3-epimerase [Methylovorus sp. MP688]
Length = 232
Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 141/207 (68%), Gaps = 6/207 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+A+F++LG+EIS++ +GA +HFDVMD +VPN++ G V ++R
Sbjct: 1 MAKPFRIAPSILSANFAKLGQEISDVITSGADIVHFDVMDNHYVPNLTIGPLVCEAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D++ D HLM+ +D I A AG +IITFHPE+S HI RSL + +G K+G+ NP
Sbjct: 61 TDAIIDVHLMVKPVDRIIPDFAKAGANIITFHPEASDHIDRSLSLVRELGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K+RQA+A I R I LE+
Sbjct: 121 TPLDYLDYVMDKVDMILLMSVNPGFGGQKFIPGTLDKLRQARARIDAYTEKTGREIWLEI 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFF 201
DGGV + NI + +AGAD V GS+ F
Sbjct: 181 DGGVNTANIAEIARAGADTFVAGSAVF 207
>gi|229918586|ref|YP_002887232.1| ribulose-phosphate 3-epimerase [Exiguobacterium sp. AT1b]
gi|229470015|gb|ACQ71787.1| ribulose-phosphate 3-epimerase [Exiguobacterium sp. AT1b]
Length = 218
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 131/201 (65%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSILAADF+ L E+ + AGA IHFDVMDG FVPNIS G V+ SLR SD V
Sbjct: 2 IKIAPSILAADFANLEAEVKAVQDAGADYIHFDVMDGQFVPNISIGLPVLASLRKKSDMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ AG DI+T H E++ H+ R L+ I A G K GV +NP TP++
Sbjct: 62 LDVHLMIDQPERYVEDFVKAGADIVTVHVEATNHLHRVLQQIKAAGAKCGVVLNPHTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E ++ ++DM+L+MTVNPGFGGQ IES +PKI L R + +E+DGGV
Sbjct: 122 TIEHILQDVDMVLLMTVNPGFGGQAFIESVVPKISALSQLRKDRQLDFEIEIDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
K + AGAD+LV GS+ +NQ
Sbjct: 182 AKRCIDAGADVLVAGSAIYNQ 202
>gi|114321981|ref|YP_743664.1| ribulose-5-phosphate 3-epimerase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228375|gb|ABI58174.1| ribulose-5-phosphate 3-epimerase [Alkalilimnicola ehrlichii MLHE-1]
Length = 230
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 145/215 (67%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
+I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 5 KIAPSILSADFARLGEEVDNVLSAGADMVHFDVMDNHYVPNLTIGPLVCEALRKHGVTAP 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +D I A+AG + ITFHPE+S H+ RSL+ + G K G+ NP TP+
Sbjct: 65 IDVHLMIKPVDRIIPDFAEAGANYITFHPEASEHVDRSLQLVRDCGCKAGLVFNPATPLD 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+L+ V++++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LEVDGGV N
Sbjct: 125 VLKYVMEKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEVDGGVKVDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+++ +AGAD V GS+ F G Y K + ++
Sbjct: 185 IRAVAEAGADTFVAGSAIF---GTDDYRKTIESMR 216
>gi|126733779|ref|ZP_01749526.1| ribulose-5-phosphate 3-epimerase [Roseobacter sp. CCS2]
gi|126716645|gb|EBA13509.1| ribulose-5-phosphate 3-epimerase [Roseobacter sp. CCS2]
Length = 227
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 131/198 (66%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 6 SIKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPATCAAIRPHIKG 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIEGFAKAGADVITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
A +E ++D +D++ +MTVNPGFGGQ+ I S I K+R+ +A+IG R I +E+DGGV
Sbjct: 126 ASVEMLLDMVDLVCVMTVNPGFGGQKFIYSQIEKVRELRAMIGDRPIHIEIDGGVDPATA 185
Query: 184 KSLVQAGADLLVVGSSFF 201
+ AGAD+LV GS+ F
Sbjct: 186 PLVAAAGADVLVAGSAVF 203
>gi|16078642|ref|NP_389461.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309454|ref|ZP_03591301.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313779|ref|ZP_03595584.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318703|ref|ZP_03599997.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322974|ref|ZP_03604268.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321315345|ref|YP_004207632.1| ribulose-phosphate 3-epimerase [Bacillus subtilis BSn5]
gi|6647758|sp|O34557|RPE_BACSU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2337808|emb|CAA74252.1| putative CfxE protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633951|emb|CAB13452.1| ribulose-5-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. 168]
gi|291484131|dbj|BAI85206.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. natto
BEST195]
gi|320021619|gb|ADV96605.1| ribulose-phosphate 3-epimerase [Bacillus subtilis BSn5]
Length = 217
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 137/202 (67%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LG EI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGVKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
++E V D++D++L+MTVNPGFGGQ+ I S +PKI++ K + GK+ + +EVDGGV
Sbjct: 122 VIEHVFDDLDLVLLMTVNPGFGGQKFIHSVLPKIKEVKRMADEKGKKDLLIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
+++AGA+LLV GS+ + Q
Sbjct: 182 TAPLVIEAGANLLVAGSAVYGQ 203
>gi|296331154|ref|ZP_06873628.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674310|ref|YP_003865982.1| ribulose-5-phosphate 3-epimerase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151798|gb|EFG92673.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412554|gb|ADM37673.1| ribulose-5-phosphate 3-epimerase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 217
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 137/202 (67%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LG EI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGVKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
++E V D++D++L+MTVNPGFGGQ+ I S +PKI++ K + GK+ + +EVDGGV
Sbjct: 122 VIEHVFDDLDLVLLMTVNPGFGGQKFIHSVLPKIKEVKRMADERGKKDLLIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
+++AGA+LLV GS+ + Q
Sbjct: 182 TAPLVIEAGANLLVAGSAVYGQ 203
>gi|259415600|ref|ZP_05739521.1| ribulose-phosphate 3-epimerase [Silicibacter sp. TrichCH4B]
gi|259348830|gb|EEW60592.1| ribulose-phosphate 3-epimerase [Silicibacter sp. TrichCH4B]
Length = 227
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 145/221 (65%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 SIKIAPSILSADFANFGQEIRAIEAEGADWVHVDVMDGHFVPNLTFGPAAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D D+I +MTVNPGFGGQ+ I+ T KIR + +IG R + +E+DGGV
Sbjct: 126 EAVAHLLDLTDLICVMTVNPGFGGQKFIDMTA-KIRSLREMIGDRPVHIEIDGGVDPSTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+V+AGAD+LV GS+ F + G + Y + + ++++A
Sbjct: 185 PLVVEAGADVLVAGSAVF-RGGSVDAPQVYGENIRKIREAA 224
>gi|303239353|ref|ZP_07325881.1| ribulose-phosphate 3-epimerase [Acetivibrio cellulolyticus CD2]
gi|302593139|gb|EFL62859.1| ribulose-phosphate 3-epimerase [Acetivibrio cellulolyticus CD2]
Length = 217
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 140/200 (70%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI I KAGA +H DVMDG FVPNI+ G ++++LR ++
Sbjct: 2 IKISPSILSADFSKLGEEIIRIEKAGADLVHIDVMDGHFVPNITLGPPIVKALRKVTNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I+ DAG DIIT H ESS H+ R+++ I G K A+NP TP+
Sbjct: 62 FDVHLMIQDADKYIDSFVDAGADIITVHVESSCHLHRTIQKIKQHGIKASAALNPATPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ V+DE+DM+L+MTVNPGFGGQ+ I+S KI+ + + R I+ +EVDGG+ S N
Sbjct: 122 ALDWVLDELDMVLLMTVNPGFGGQKYIDSVTQKIKALRDNLVCRGINVDIEVDGGIDSNN 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I + +AGA+++V GS+ FN
Sbjct: 182 IYKVTEAGANIIVSGSTIFN 201
>gi|121604882|ref|YP_982211.1| ribulose-phosphate 3-epimerase [Polaromonas naphthalenivorans CJ2]
gi|120593851|gb|ABM37290.1| ribulose-5-phosphate 3-epimerase [Polaromonas naphthalenivorans
CJ2]
Length = 236
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 149/224 (66%), Gaps = 7/224 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLGEE+ I AGA +HFDVMD +VPN++ G V ++R +
Sbjct: 12 RIAPSILSADFSRLGEEVRAIEAAGAALVHFDVMDNHYVPNLTIGPLVCEAIRPHVKIGI 71
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I + A AG ++ITFHPE+S H+ R+L+ I G K G+A+NP TP+A
Sbjct: 72 DVHLMVEPVDALIPLFARAGANLITFHPEASRHVDRTLQLIRDHGCKAGIALNPATPLAW 131
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGVT 179
++ V+D +D++L+M+VNPGFGGQ I +T+ K+R+A+ I G + I LEVDGGV
Sbjct: 132 MDHVMDRLDIVLLMSVNPGFGGQAFIPATLAKLREARRRIDAHSAAGGQPIWLEVDGGVK 191
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKSALA 222
+ NI + AGAD V GS+ F + Y + +++L+++A A
Sbjct: 192 TGNIGQIAAAGADTFVAGSAVFGSPDADGGYHRVMHELRRAAQA 235
>gi|148979188|ref|ZP_01815367.1| ribulose-phosphate 3-epimerase [Vibrionales bacterium SWAT-3]
gi|145961946|gb|EDK27236.1| ribulose-phosphate 3-epimerase [Vibrionales bacterium SWAT-3]
Length = 224
Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ + A AG +ITFH E+S HI R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDNIVPEFAKAGASMITFHVEASEHIDRTLQLIKEHGCKAGVVLNPATPLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI + R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FNQ
Sbjct: 186 REIAEAGADMFVAGSAIFNQ 205
>gi|239626551|ref|ZP_04669582.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47_FAA]
gi|239516697|gb|EEQ56563.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47FAA]
Length = 220
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 139/199 (69%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSILAADF LG ++ + +AGA+ IH DVMDG FVP+ISFG VI+SLRS +D+VF
Sbjct: 4 KLAPSILAADFGNLGAQVRTVAQAGAEYIHLDVMDGAFVPSISFGMPVIKSLRSCTDAVF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ ++ + G DIIT H E+ H+ R + I +G K GVA+NP TP+
Sbjct: 64 DVHMMVEEPGRYVEDMKACGADIITVHAEACTHLDRVVNQIKELGLKAGVALNPATPIQA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ ++D++DM+LIMTVNPGFGGQ+ I T+ K+R +A I + + ++VDGGV++RN+
Sbjct: 124 LDCILDQLDMVLIMTVNPGFGGQKFIPYTLDKVRGLRARIDQLGLPVDIQVDGGVSARNV 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
K ++ AGA++ V GS+ F
Sbjct: 184 KEIMDAGANVFVAGSAVFG 202
>gi|257466330|ref|ZP_05630641.1| ribulose-phosphate 3-epimerase [Fusobacterium gonidiaformans ATCC
25563]
gi|315917487|ref|ZP_07913727.1| ribulose-phosphate 3-epimerase [Fusobacterium gonidiaformans ATCC
25563]
gi|313691362|gb|EFS28197.1| ribulose-phosphate 3-epimerase [Fusobacterium gonidiaformans ATCC
25563]
Length = 212
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 145/214 (67%), Gaps = 6/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DFSRLGEEI I +A A IH DVMDG FVPN++FG +I+S+R Y++
Sbjct: 2 EIKIAPSILSSDFSRLGEEIVAIDQAKADYIHIDVMDGIFVPNLTFGPPIIKSIRKYTNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI + +I AG DIIT H ES+ H+ R ++ I A G K V++NP T
Sbjct: 62 IFDVHLMIDKPERYIEDYVKAGADIITVHAESTIHLHRVIQQIKAFGVKAAVSLNPSTSE 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+L+ VI ++DM+L+M+VNPGFGGQ+ I + + KI+ +A+ + I +EVDGG+T I
Sbjct: 122 EVLKYVIQDLDMVLVMSVNPGFGGQKFIPAVVDKIKAIRAM--REDIEIEVDGGITDATI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+S ++AGA V GS F+ +YA+R+ +LK
Sbjct: 180 QSCIEAGATTFVAGSYVFSG----NYAERIANLK 209
>gi|59712895|ref|YP_205671.1| ribulose-phosphate 3-epimerase [Vibrio fischeri ES114]
gi|59480996|gb|AAW86783.1| D-ribulose-5-phosphate 3-epimerase [Vibrio fischeri ES114]
Length = 225
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 148/214 (69%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + +GA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLASGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS + A AG +ITFH E+S HI R+L+ I G + GV +NP TP++
Sbjct: 66 DVHLMVKPVDSIVPEFAKAGATMITFHVEASEHIDRTLQLIKEHGCQAGVVLNPATPLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++DMIL+M+VNPGFGGQ I +T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEYIMDKVDMILLMSVNPGFGGQSFIPNTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD+ V GS+ FNQ +Y + +++++
Sbjct: 186 REIAEAGADMFVAGSAIFNQP---NYKEVIDEMR 216
>gi|254508173|ref|ZP_05120298.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus 16]
gi|219548895|gb|EED25895.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus 16]
Length = 223
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADMARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEYGCKAGVVLNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE +ID++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEYIIDKVDMILLMSVNPGFGGQSFIPKTLDKLRAVRKMIDESGRDIRLEIDGGVKVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K + +AGAD+ V GS+ FNQ
Sbjct: 186 KEIAEAGADMFVAGSAIFNQ 205
>gi|163754265|ref|ZP_02161388.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Kordia algicida OT-1]
gi|161326479|gb|EDP97805.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Kordia algicida OT-1]
Length = 219
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAADF+ L +I + ++ A H D+MDG FVPNISFG V++++ ++
Sbjct: 5 RIAPSILAADFANLQRDIEMVNQSEADWFHIDIMDGVFVPNISFGMPVLKAINKHATKTI 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D +I AD G D++T H E+ H+ R+L+ I A G K GVA+NP T V +
Sbjct: 65 DVHLMIVDPDRYIQTFADLGADVLTVHYEACTHLHRTLQAIKAAGMKAGVALNPHTNVNL 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
LEDVI++ID++ IM+VNPGFGGQ IE+T K+++ KALI ++ + +E+DGGV +N
Sbjct: 125 LEDVINDIDLVCIMSVNPGFGGQSFIENTYQKVKKLKALITEKGAATEIEIDGGVNDKNA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K+LV AGAD+LV GS F + + + L
Sbjct: 185 KALVDAGADVLVAGSFVFRSENPTATIQNL 214
>gi|315635245|ref|ZP_07890522.1| ribulose-phosphate 3-epimerase [Aggregatibacter segnis ATCC 33393]
gi|315475991|gb|EFU66746.1| ribulose-phosphate 3-epimerase [Aggregatibacter segnis ATCC 33393]
Length = 224
Score = 204 bits (519), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 150/226 (66%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ N+ K G +HFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVENVLKCGGDVVHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPESS HI R+L+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGASYITFHPESSEHIDRTLQLIRDNGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++QA+ I + I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKVDIILLMSVNPGFGGQSFIPATLEKLKQARKRIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI + +AGAD+ V GS+ F+Q Y K ++++++ A+
Sbjct: 180 VKASNIAEIARAGADMFVAGSAIFDQP---DYKKVIDEMRQQLAAV 222
>gi|257453991|ref|ZP_05619267.1| ribulose-phosphate 3-epimerase [Enhydrobacter aerosaccus SK60]
gi|257448656|gb|EEV23623.1| ribulose-phosphate 3-epimerase [Enhydrobacter aerosaccus SK60]
Length = 252
Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++FG+ + ++LR Y +
Sbjct: 31 IAPSILSADFARLGEEVEKVIAAGADVVHFDVMDNHYVPNLTFGSMICQALRDYGVTAPI 90
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +DS I AG IITFHPE++ H+ RSL+ I G G+ +NP TP+
Sbjct: 91 DVHLMVSPVDSMIEQFLKAGASIITFHPEATQHVDRSLQLIKDGGADCGLVLNPATPLHH 150
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D IL+M+VNPGFGGQ I+ T+ KI + +I R+I LEVDGG+ + NI
Sbjct: 151 LDYVMDKVDQILLMSVNPGFGGQAFIDGTLKKIEAVREMIRLSGRNIRLEVDGGIKASNI 210
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+++ +AGAD+ V GS+ FNQ
Sbjct: 211 RAVAEAGADMFVAGSAIFNQ 230
>gi|85711886|ref|ZP_01042941.1| D-ribulose-5-phosphate 3-epimerase [Idiomarina baltica OS145]
gi|85694283|gb|EAQ32226.1| D-ribulose-5-phosphate 3-epimerase [Idiomarina baltica OS145]
Length = 221
Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 144/216 (66%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++ G V ++LR Y +
Sbjct: 5 IAPSILSADFARLGEEVNNVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDYGVTAPI 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG II+FHPE+S H+ R+++TI G + G+ NP TP+
Sbjct: 65 DVHLMVKPVDRIVPDFAAAGASIISFHPEASEHVDRTIQTIKEHGCQAGLVFNPATPLHY 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+ID+IL+M+VNPGFGGQ+ I T+ K+RQ + I R I LEVDGGV NI
Sbjct: 125 LDYVMDKIDLILLMSVNPGFGGQKFIPGTLDKLRQVRERIDASGRDIRLEVDGGVNCDNI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ QAGAD+ V GS+ FN YA+ + +K++
Sbjct: 185 GEIAQAGADMFVAGSAIFNAD---DYAEVIRTMKQA 217
>gi|77461341|ref|YP_350848.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens Pf0-1]
gi|77385344|gb|ABA76857.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens Pf0-1]
Length = 224
Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D + +AG ITFHPE++ H+ RSL+ I G K+G+ NP
Sbjct: 60 GVTAPIDAHLMVSPVDRIVGDFIEAGATYITFHPEATLHVDRSLQLIREGGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ VID++DM+L+M+VNPGFGGQ+ I T+ K+R+A+A+I R I LE+DGG
Sbjct: 120 ATPLDVLKYVIDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARAIIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|254519235|ref|ZP_05131291.1| ribulose-phosphate 3-epimerase [Clostridium sp. 7_2_43FAA]
gi|226912984|gb|EEH98185.1| ribulose-phosphate 3-epimerase [Clostridium sp. 7_2_43FAA]
Length = 215
Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 144/199 (72%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGEEI N+ KAGA IH DVMDG FVPNIS G VI+S+R+ + +
Sbjct: 2 VKISPSILSADFSKLGEEIINVDKAGADFIHIDVMDGNFVPNISIGLPVIKSIRNKTSKI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I+ +AG DIIT H E+ HI R++ I + G + GV++NP TP
Sbjct: 62 FDVHLMIENPSRYIDDFVNAGADIITIHYEAEKHIDRAIEYIKSKGIRAGVSLNPGTPTF 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGGVTSRN 182
+L+++I+++D++LIM+VNPGFGGQ+ I + KI++ K +L + + +EVDGGV N
Sbjct: 122 VLKNIINKLDLVLIMSVNPGFGGQKFIPYALDKIKEVKEMSLDSNKDLLIEVDGGVDKTN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
K++++AGA++LV GS+ F
Sbjct: 182 AKAIIEAGANVLVAGSAVF 200
>gi|15595804|ref|NP_249298.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PAO1]
gi|107099593|ref|ZP_01363511.1| hypothetical protein PaerPA_01000606 [Pseudomonas aeruginosa PACS2]
gi|116054335|ref|YP_788780.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889348|ref|YP_002438212.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa LESB58]
gi|254237179|ref|ZP_04930502.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa C3719]
gi|296387115|ref|ZP_06876614.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PAb1]
gi|313111747|ref|ZP_07797540.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa 39016]
gi|9946481|gb|AAG03996.1|AE004497_3 ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PAO1]
gi|115589556|gb|ABJ15571.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169110|gb|EAZ54621.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa C3719]
gi|218769571|emb|CAW25331.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa LESB58]
gi|310884042|gb|EFQ42636.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa 39016]
Length = 224
Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVSAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLEVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V +NI+ + AGAD V GS+ FN
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFN 204
>gi|260460237|ref|ZP_05808489.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
gi|259033882|gb|EEW35141.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
Length = 223
Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 145/196 (73%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADFSRLGEE+ + AGA IH DVMDG FVPNI+FG VI+++R+ +D VFD
Sbjct: 6 IAPSVLSADFSRLGEEVEAVAAAGADWIHLDVMDGHFVPNITFGPAVIKAIRNRTDKVFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI+ D ++ AD GCDIIT H E+ H+ RSL+TI +GKK GV++NP TP ++
Sbjct: 66 CHLMITPADPYLAAFADVGCDIITVHAEAGVHLDRSLQTIRDLGKKAGVSLNPSTPETVI 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+MTVNPGFGGQ I S + K+++ KA+IG R I +E+DGGVTS+ L
Sbjct: 126 EYVLDRLDLVLLMTVNPGFGGQAFIPSVVEKVKRVKAMIGDRPIDIEIDGGVTSQTAPLL 185
Query: 187 VQAGADLLVVGSSFFN 202
AGA++LV GS+ F
Sbjct: 186 ASAGANVLVAGSAIFK 201
>gi|261401216|ref|ZP_05987341.1| ribulose-phosphate 3-epimerase [Neisseria lactamica ATCC 23970]
gi|269208797|gb|EEZ75252.1| ribulose-phosphate 3-epimerase [Neisseria lactamica ATCC 23970]
Length = 227
Score = 204 bits (519), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 141/206 (68%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 AYRIAPSILSADFARLGEEVANVISAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ R I++EVDGG
Sbjct: 123 YLLENVLDRLDMVLLMSVNPGFGGQGFILHTLEKIRRVRAMLDAYEAQSGRHIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI ++ AGAD V GS+ F +
Sbjct: 183 IKTDNIAAVAAAGADTFVAGSAIFGK 208
>gi|119943954|ref|YP_941634.1| ribulose-phosphate 3-epimerase [Psychromonas ingrahamii 37]
gi|119862558|gb|ABM02035.1| ribulose-5-phosphate 3-epimerase [Psychromonas ingrahamii 37]
Length = 222
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG IITFHPE+S H+ RSL+ I G K G+ +NP T + +
Sbjct: 66 DVHLMVKPVDTMIVEFAKAGASIITFHPEASDHVDRSLQLIKEHGCKAGLVLNPATSLEV 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L V+D++D++L+M+VNPGFGGQ I T+ K+RQ K LI R I L+VDGGV + NI
Sbjct: 126 LTHVMDKLDVVLLMSVNPGFGGQSFIPHTLEKLRQVKKLITTSGRDIRLQVDGGVKTDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K + +AGAD+ V GS+ FNQ
Sbjct: 186 KEIAEAGADMFVSGSAIFNQ 205
>gi|56461424|ref|YP_156705.1| D-ribulose-5-phosphate 3-epimerase [Idiomarina loihiensis L2TR]
gi|56180434|gb|AAV83156.1| D-ribulose-5-phosphate 3-epimerase [Idiomarina loihiensis L2TR]
Length = 224
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 140/212 (66%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V ++LR Y ++
Sbjct: 5 IAPSILSADFARLGEEVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGIEAPI 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ R+L+ IH G + G+ +NP TP+
Sbjct: 65 DVHLMVKPVDRIIPDFAEAGASIITFHPEASDHVDRTLQLIHEQGCQAGLVLNPATPLHY 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+R + I R I LEVDGGV NI
Sbjct: 125 LDHVMDKVDVILLMSVNPGFGGQSFIPSTLDKLRAVRKRIKASGRDIRLEVDGGVKVSNI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGAD+ V GS+ FN S + + D
Sbjct: 185 GEIAEAGADMFVAGSAIFNADDYASVIRTMRD 216
>gi|89094165|ref|ZP_01167108.1| ribulose-phosphate 3-epimerase [Oceanospirillum sp. MED92]
gi|89081640|gb|EAR60869.1| ribulose-phosphate 3-epimerase [Oceanospirillum sp. MED92]
Length = 224
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 143/220 (65%), Gaps = 6/220 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS- 61
P +I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 2 PDFKIAPSILSADFARLGEEVENVLSAGADIVHFDVMDNHYVPNLTIGPMVCSALRKHGI 61
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I +AG ITFHPE S HI RSL+ I G K+G+ NP T
Sbjct: 62 QAPIDVHLMVKPVDRLIGDFIEAGASYITFHPEGSEHIDRSLQMIRDGGCKSGLVFNPAT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
P++ LE V+D++DM+L+M+VNPGFGGQ+ I T+ K+RQA+ +I + I LE+DGGV
Sbjct: 122 PLSHLEYVLDKVDMVLLMSVNPGFGGQKFIPGTLDKLRQARKIIDESGYDIRLEIDGGVG 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NIK + +AGAD V GS+ FN YA + +++
Sbjct: 182 VGNIKEIAEAGADTFVAGSAIFNTD---DYADTIAQMREQ 218
>gi|256026521|ref|ZP_05440355.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D11]
gi|289764534|ref|ZP_06523912.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D11]
gi|289716089|gb|EFD80101.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D11]
Length = 215
Score = 204 bits (518), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL++DFS+LGEE+ +I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MINGIKIAPSILSSDFSKLGEEVIDIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDKPERYIEDFVKAGADIVVVHSESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RTDIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ +Y +R+N LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----NYKERINLLKLKA 214
>gi|114775450|ref|ZP_01451018.1| ribulose-phosphate 3-epimerase [Mariprofundus ferrooxydans PV-1]
gi|114553561|gb|EAU55942.1| ribulose-phosphate 3-epimerase [Mariprofundus ferrooxydans PV-1]
Length = 222
Score = 204 bits (518), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 144/219 (65%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF++LGEEI I + G IHFDVMDG FVP I+ G +V +++RS+
Sbjct: 1 MKKDLVIAPSILSADFAKLGEEIRAIDEGGCDWIHFDVMDGSFVPPITIGDNVCKAIRSH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM++ D+ + A+AG DIIT H E+ H+ R+L+ I ++GKK GV++NP
Sbjct: 61 TSKPIDVHLMVNHPDTQVEFFANAGADIITVHQEACTHLERTLQLIRSLGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV+ ++ V+ +D++L+M+VNPG+GGQ I + PKIRQA+ ++ LEVDGGV
Sbjct: 121 TPVSTIQHVLHCVDLVLLMSVNPGYGGQSYIHAVTPKIRQARKMLDDAGCDAWLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ I + AGAD LV GS+ +N YA + +L+
Sbjct: 181 NVKTIAEVSAAGADALVAGSAVYNTP---DYAAAIAELR 216
>gi|169335087|ref|ZP_02862280.1| hypothetical protein ANASTE_01494 [Anaerofustis stercorihominis DSM
17244]
gi|169257825|gb|EDS71791.1| hypothetical protein ANASTE_01494 [Anaerofustis stercorihominis DSM
17244]
Length = 215
Score = 204 bits (518), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 145/218 (66%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSI ADF RL E+I + + +H DVMDG +VPNI+FG D I LR ++D
Sbjct: 2 VKLSPSIFGADFGRLNEQIKAVEDCNVEMLHIDVMDGNYVPNIAFGPDQIAMLRPHTDLF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M++ D +I I AG +IT H E++ H+ RSL I + G K GV +NP TP
Sbjct: 62 FDVHMMVTEPDRYIERIVKAGAQMITVHAEATTHLHRSLMLIKSFGVKCGVVLNPATPPD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+L+ V+D+IDM+L+MTVNPG GG + I K+R+ K +IG R I ++VDGGV + N+K
Sbjct: 122 VLKYVLDDIDMVLVMTVNPGGGGGAFNPTMIEKVREIKEMIGDRDIDIQVDGGVNADNVK 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
SLV AGA+++V GS F G++ AK L+DL+K+A A
Sbjct: 182 SLVDAGANVIVAGSFAFT--GDV--AKNLDDLRKAADA 215
>gi|296113297|ref|YP_003627235.1| ribulose-5-phosphate 3-epimerase [Moraxella catarrhalis RH4]
gi|295920991|gb|ADG61342.1| ribulose-5-phosphate 3-epimerase [Moraxella catarrhalis RH4]
gi|326561980|gb|EGE12313.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 46P47B1]
gi|326570205|gb|EGE20250.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis BC8]
gi|326573237|gb|EGE23205.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 101P30B1]
gi|326575861|gb|EGE25784.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis CO72]
gi|326576946|gb|EGE26852.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis O35E]
Length = 226
Score = 204 bits (518), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 140/206 (67%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSIL+ADF+RLG +I ++ +AGA +HFDVMD +VPN++FG+ + ++L+ Y
Sbjct: 1 MTQPFLIAPSILSADFARLGADIESVLEAGADVVHFDVMDNHYVPNLTFGSMICQALKDY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I AG DIITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 61 GITAPIDVHLMVKPVDGMIEQFLKAGADIITFHPEASEHIDRSLQLIKDGGAKCGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ +D++D IL+M+VNPGFGGQ+ I++T+ K+ + +I R I LEVDGG
Sbjct: 121 ATPLYYLDHTLDKVDQILLMSVNPGFGGQKFIDATLDKLATVRQMIDDSGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+++ +AGAD+ V GS+ FNQ
Sbjct: 181 VNVANIRTIGEAGADMFVAGSAIFNQ 206
>gi|168207263|ref|ZP_02633268.1| ribulose-phosphate 3-epimerase [Clostridium perfringens E str.
JGS1987]
gi|170661353|gb|EDT14036.1| ribulose-phosphate 3-epimerase [Clostridium perfringens E str.
JGS1987]
Length = 217
Score = 204 bits (518), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 145/202 (71%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPERYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIAYSLDKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
NIK +V+AGA++LV GS+ F +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKE 203
>gi|330447071|ref|ZP_08310721.1| ribulose-phosphate 3-epimerase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491262|dbj|GAA05218.1| ribulose-phosphate 3-epimerase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 224
Score = 204 bits (518), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA IHFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVIHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS I A AG +ITFH E+S HI R+L+ I G K GV NP TP+
Sbjct: 66 DVHLMVKPVDSIIPDFAKAGASMITFHVEASEHIDRTLQLIKEHGCKAGVVFNPATPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I ST+ K+R+ + I R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDMILLMSVNPGFGGQSFIPSTLDKLREVRKRIDASGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FN+
Sbjct: 186 REIAEAGADMFVAGSAIFNE 205
>gi|239826571|ref|YP_002949195.1| ribulose-phosphate 3-epimerase [Geobacillus sp. WCH70]
gi|239806864|gb|ACS23929.1| ribulose-phosphate 3-epimerase [Geobacillus sp. WCH70]
Length = 221
Score = 204 bits (518), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 139/202 (68%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RL EEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSADFARLAEEIRDVEQGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG D ++ H E+ PH+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEQPDRYIPAFAKAGADYLSVHVEACPHLHRTIHLIKEQGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ +ID++D++L+MTVNPGFGGQ+ I S +PKIRQ L+ +R + +EVDGG+ ++
Sbjct: 122 MIQHIIDDVDLVLLMTVNPGFGGQKFIPSVLPKIRQVAQLVKERGRFVEIEVDGGINAKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA++LV GS+ +N++
Sbjct: 182 ARLCMEAGANVLVAGSAIYNER 203
>gi|170749956|ref|YP_001756216.1| ribulose-phosphate 3-epimerase [Methylobacterium radiotolerans JCM
2831]
gi|170656478|gb|ACB25533.1| Ribulose-phosphate 3-epimerase [Methylobacterium radiotolerans JCM
2831]
Length = 228
Score = 204 bits (518), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 146/214 (68%), Gaps = 1/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFS+L EE + AGA IH DVMDG FVPNI+FG V+++LR ++ FD
Sbjct: 6 IAPSILSADFSKLAEETRAVDAAGADWIHLDVMDGHFVPNITFGPPVVKALRPHTQKYFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AG D IT H E+ PHI RSL+TI +GK+ GVAINP TP A++
Sbjct: 66 VHLMIAPADPYLAAFAQAGADGITVHAEAGPHIHRSLQTIRDLGKRAGVAINPGTPAAMV 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+MTVNPGFGGQ ++ + + + +A++ R I ++VDGG+ +K
Sbjct: 126 EPVLDLVDLVLVMTVNPGFGGQSFVKGAMESVARVRAMVAGRDIRIQVDGGIDPETVKVA 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGAD V G++ F+ G +YA+R+ +++ A
Sbjct: 186 SRAGADTFVAGNAVFS-GGPDAYAERIAAIREGA 218
>gi|325576670|ref|ZP_08147357.1| ribulose-phosphate 3-epimerase [Haemophilus parainfluenzae ATCC
33392]
gi|325161117|gb|EGC73233.1| ribulose-phosphate 3-epimerase [Haemophilus parainfluenzae ATCC
33392]
Length = 223
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 149/225 (66%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GIKAPIDVHLMVKPVDRIIPDFAKAGADYITFHPEASEHIDRSLQLIREHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ + ST+ K++QA+ LI + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVILLMSVNPGFGGQSFLPSTLKKLQQARRLIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVNNIAEIAAAGADMFVAGSAIF---GKPDY-KQIIDQMRAQLA 220
>gi|197335900|ref|YP_002157083.1| ribulose-phosphate 3-epimerase [Vibrio fischeri MJ11]
gi|197317390|gb|ACH66837.1| ribulose-phosphate 3-epimerase [Vibrio fischeri MJ11]
Length = 225
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 147/214 (68%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + +GA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLASGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS + A AG +ITFH E+S HI R+L+ I G + GV +NP TP++
Sbjct: 66 DVHLMVKPVDSIVPEFAKAGATMITFHVEASEHIDRTLQLIKEHGCQAGVVLNPATPLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++DMIL+M+VNPGFGGQ I +T+ K+R + +I R I LE+DGGV NI
Sbjct: 126 LEYIMDKVDMILLMSVNPGFGGQSFIPNTLDKLRAVRKMIDDSGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD+ V GS+ FNQ +Y + +++++
Sbjct: 186 REIAEAGADMFVAGSAIFNQP---NYKEVIDEMR 216
>gi|210622421|ref|ZP_03293153.1| hypothetical protein CLOHIR_01101 [Clostridium hiranonis DSM 13275]
gi|210154237|gb|EEA85243.1| hypothetical protein CLOHIR_01101 [Clostridium hiranonis DSM 13275]
Length = 217
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 150/218 (68%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+RL E++ + KAG + +H DVMDG FVPNI+ G +++SLR + V
Sbjct: 2 VKLAPSILSADFARLLEDVKKVEKAGCEYLHIDVMDGHFVPNITLGPGIVKSLRKDVNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D++I AGCDIIT H E+ H+ R+++ I + G K GV +NP T +
Sbjct: 62 FDAHLMIENPDNYIEEFVKAGCDIITVHVEACTHLHRTIQNIKSHGIKAGVVLNPATSLD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ V+D++DM+L+M+VNPGFGGQ I KIR+ + +I +R ++ +EVDGGV N
Sbjct: 122 TIKYVLDDVDMVLLMSVNPGFGGQSYIPCVTEKIRELRKMIDERGLNVEIEVDGGVKPSN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK +V+AGAD+ V GS+ F K +I A R +L++SA
Sbjct: 182 IKEVVEAGADVCVAGSAIFG-KDDIDAAVR--ELRESA 216
>gi|172057930|ref|YP_001814390.1| ribulose-phosphate 3-epimerase [Exiguobacterium sibiricum 255-15]
gi|171990451|gb|ACB61373.1| Ribulose-phosphate 3-epimerase [Exiguobacterium sibiricum 255-15]
Length = 218
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 144/218 (66%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ L ++ + AGA IHFDVMDG FVPNISFG V+ SLR +D +
Sbjct: 2 IKIAPSILSADFANLERDVKAVKAAGADYIHFDVMDGQFVPNISFGLPVLSSLRQKTDMI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI ++ + +AG DI+TFH E++ H+ R L+ I A G K GV +NP TP++
Sbjct: 62 LDVHLMIDRPENFVEAFVEAGADIVTFHVEATNHVHRVLQQIKAAGAKAGVVLNPHTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E V++E+DM+L+MTVNPGFGGQ I + K+ Q AL + +S +E+DGGV +
Sbjct: 122 MIEHVLEEVDMVLLMTVNPGFGGQAFIPGVMKKLSQLAALKAEHDLSFEIEIDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
K ++ GA++LV GS+ +N Y++ + ++ +A
Sbjct: 182 AKLCIENGANVLVAGSAIYNAP---DYSEAITSIRNAA 216
>gi|52426385|ref|YP_089522.1| ribulose-phosphate 3-epimerase [Mannheimia succiniciproducens
MBEL55E]
gi|52308437|gb|AAU38937.1| Rpe protein [Mannheimia succiniciproducens MBEL55E]
Length = 224
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 145/219 (66%), Gaps = 6/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
S I PSIL+AD +RLGE++ N+ KAGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 3 SYLIAPSILSADLARLGEDVENVLKAGADVIHFDVMDNHYVPNLTFGPAVCKALRDYGIT 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G K G+ NP T
Sbjct: 63 APIDVHLMVKPVDRLIPDFAKAGADYITFHPEASEHIDRSLQLIRNSGCKAGLVFNPATS 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
++ L+ V+D+ID+IL+M+VNPGFGGQ I +T+ K+++A+ I + I LEVDGGV
Sbjct: 123 LSYLDYVMDKIDVILLMSVNPGFGGQSFIPATMQKLQEARRRIDESGFDIRLEVDGGVKI 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI + AGAD+ V GS+ F+Q Y K +N++++
Sbjct: 183 NNIAEIAAAGADMFVAGSAIFDQP---DYRKVINEMRQE 218
>gi|323498125|ref|ZP_08103129.1| ribulose-phosphate 3-epimerase [Vibrio sinaloensis DSM 21326]
gi|323316836|gb|EGA69843.1| ribulose-phosphate 3-epimerase [Vibrio sinaloensis DSM 21326]
Length = 223
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADMARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE +ID++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEYIIDKVDMILLMSVNPGFGGQSFIPKTLDKLRAVRQMIDESGRDIRLEIDGGVKVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K + +AGAD+ V GS+ FNQ
Sbjct: 186 KEIAEAGADMFVAGSAIFNQ 205
>gi|237744726|ref|ZP_04575207.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 7_1]
gi|260494591|ref|ZP_05814721.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_33]
gi|229431955|gb|EEO42167.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 7_1]
gi|260197753|gb|EEW95270.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_33]
Length = 215
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 145/220 (65%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL++DFS+LGEE+ I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MINGIKIAPSILSSDFSKLGEEVVAIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDKPERYIENFVKAGADIVVVHSESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RTDIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ +Y +R+N LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----NYKERINLLKLKA 214
>gi|312963404|ref|ZP_07777886.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens WH6]
gi|311282210|gb|EFQ60809.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens WH6]
Length = 224
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLASGADFVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITAPIDAHLMVSPVDRIIGDFIEAGATYITFHPEASLHVDRTLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFN 204
>gi|149201187|ref|ZP_01878162.1| Pentose-5-phosphate-3-epimerase [Roseovarius sp. TM1035]
gi|149145520|gb|EDM33546.1| Pentose-5-phosphate-3-epimerase [Roseovarius sp. TM1035]
Length = 233
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 137/202 (67%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
T SI+I PSIL+ADF+ G EI I G +H DVMDG FVPN++FG + ++R +
Sbjct: 3 FTRSIKIAPSILSADFANFGAEIRAIEAEGCDWVHVDVMDGHFVPNLTFGPPLCAAIRPH 62
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+V D HLMIS +D +I+ A AG D++T H E+ PHI R+L+ I G K G+A+NP
Sbjct: 63 IKTVMDVHLMISPVDPYIDAFAQAGADVLTAHLEAGPHIHRTLQAIRGAGCKAGLALNPG 122
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + +E ++D +D+I +MTVNPGFGGQ+ I S I K+++ +A+IG R I +E+DGG+T+
Sbjct: 123 TGIDAVEHLLDMVDLICVMTVNPGFGGQKFIHSQIDKVKRLRAMIGDRPIHIEIDGGITT 182
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
+ + AGAD+LV GS+ F
Sbjct: 183 QTAPLMAAAGADVLVAGSAVFK 204
>gi|254495199|ref|ZP_05108123.1| ribulose-phosphate 3-epimerase [Polaribacter sp. MED152]
gi|85819551|gb|EAQ40708.1| ribulose-phosphate 3-epimerase [Polaribacter sp. MED152]
Length = 218
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 136/197 (69%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L +I + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 5 IAPSILAADFANLQRDIEMVNNSEADWFHIDIMDGVFVPNISFGMPVLKAITQHAKKTID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I AD G DI+T H E+ H+ R+++ I A G K GVA+NP TP+A+L
Sbjct: 65 VHLMIVNPDQYIQTFADLGADILTVHYEACTHLHRTIQAIKAAGLKAGVALNPHTPIAVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
ED+I+++DM+ +M+VNPGFGGQ IE+T K+ Q K LI + + +E+DGGVT++N
Sbjct: 125 EDIIEDLDMVCLMSVNPGFGGQSFIENTYKKVSQLKHLIEFTESNCQIEIDGGVTNKNAN 184
Query: 185 SLVQAGADLLVVGSSFF 201
+L++AGA++LV GS F
Sbjct: 185 ALIEAGANVLVAGSYVF 201
>gi|327441105|dbj|BAK17470.1| pentose-5-phosphate-3-epimerase [Solibacillus silvestris StLB046]
Length = 221
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 147/220 (66%), Gaps = 5/220 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSILAADF++LG+E+ + AGA+ IH DVMDG FVPNISFGA + ++R S
Sbjct: 2 IKIAPSILAADFAKLGQEVKEVEAAGAELIHIDVMDGHFVPNISFGAIALEAIRPLSTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 62 MDVHLMIENPDQYIEQFAKAGADYITVHVEACRHLHRTIQLIRSHGVKPGVVLNPHTPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ +++++DM+L MTVNPGFGGQ+ IES +PK+ +I +R +I +E+DGG+ +
Sbjct: 122 TIQHILEDVDMVLFMTVNPGFGGQKFIESVVPKVEALSEIIKERGLNIEIEIDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I +AGA + V GS+ ++++ A+ L ++K++ LA
Sbjct: 182 IVPCAKAGATVFVAGSAIYSKE---DRAQALQEIKQAGLA 218
>gi|152985747|ref|YP_001346146.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PA7]
gi|150960905|gb|ABR82930.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PA7]
Length = 224
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVSAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V +NI+ + AGAD V GS+ FN
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFN 204
>gi|19704015|ref|NP_603577.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296327590|ref|ZP_06870136.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19714203|gb|AAL94876.1| Ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296155416|gb|EFG96187.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 215
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE++ I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTNGIKIAPSILSSDFSKLGEEVAAIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +FD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K G+++NP
Sbjct: 61 TGLIFDVHLMIDKPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGIKAGISLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RVDIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK V AGA++ V GS F+ +Y +R++ LK A
Sbjct: 179 ETIKVCVDAGANIFVAGSYVFSG----NYKERIDLLKLKA 214
>gi|149913651|ref|ZP_01902184.1| Pentose-5-phosphate-3-epimerase [Roseobacter sp. AzwK-3b]
gi|149812771|gb|EDM72600.1| Pentose-5-phosphate-3-epimerase [Roseobacter sp. AzwK-3b]
Length = 280
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 140/212 (66%), Gaps = 1/212 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSIL+ADF+ G EI + GA IH DVMDG FVPN++FG + ++R + +
Sbjct: 57 SLKIAPSILSADFANFGAEIRAVEAEGADWIHVDVMDGHFVPNLTFGPPMCAAIRPHIKT 116
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ A AG DI+T H E+ PH+ R+L+ I G K G+A+NP T +
Sbjct: 117 VMDVHLMIAPVDPYIDAFAAAGADILTAHLEAGPHVHRTLQAIRGAGCKAGLALNPGTGI 176
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E ++D +D+I +MTVNPGFGGQ+ I S I K+R+ + +IG R I +E+DGG+T
Sbjct: 177 GDIEHLLDMVDLICVMTVNPGFGGQKFIHSQIEKVRRLRQMIGDRPIHIEIDGGITPETA 236
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ QAGAD+LV GS+ F + G +S D
Sbjct: 237 PLMTQAGADVLVAGSAVF-KGGSVSNPAPYGD 267
>gi|258546066|ref|ZP_05706300.1| ribulose-phosphate 3-epimerase [Cardiobacterium hominis ATCC 15826]
gi|258518665|gb|EEV87524.1| ribulose-phosphate 3-epimerase [Cardiobacterium hominis ATCC 15826]
Length = 226
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 146/214 (68%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE+++ + AGA IHFDVMD FVPN+SFGA + ++LR Y S
Sbjct: 8 IAPSILSADFARLGEDVAAVLAAGADVIHFDVMDNHFVPNLSFGAPICQALRDYGISAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM S +D+ I A AG D ++FHPE+S HI RSL+ I + G K G+ NP TP+A
Sbjct: 68 DVHLMASPVDALIEQFAQAGADYVSFHPEASIHIDRSLQLIKSHGMKAGLVFNPATPLAC 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+ID+ILIM+VNPGFGGQ + S + K+R A+ +I R I LEVDGGV + NI
Sbjct: 128 LDYVLDKIDLILIMSVNPGFGGQAFLPSALDKLRAARRIIDASGRDIRLEVDGGVKTDNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGAD+ V GS+ FN YA +N ++
Sbjct: 188 AAIAAAGADMFVAGSAIFNAP---DYAAVINTMR 218
>gi|256819178|ref|YP_003140457.1| ribulose-phosphate 3-epimerase [Capnocytophaga ochracea DSM 7271]
gi|256580761|gb|ACU91896.1| ribulose-phosphate 3-epimerase [Capnocytophaga ochracea DSM 7271]
Length = 216
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 142/217 (65%), Gaps = 5/217 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L + + + + A H D+MDG FVPNIS+G ++ + ++ D
Sbjct: 3 LAPSLLAADFGNLQQAVEMVNASEADWFHIDIMDGVFVPNISYGMPILSVIHKHATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I+ A G DI+T H E+ H+ R+++ I A G K GVA+NP TPVA+L
Sbjct: 63 VHLMIIDPDRYISTFAKLGSDILTVHYEACTHLHRTIQAIKAEGMKAGVALNPHTPVALL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
EDVI +ID++L+M+VNPGFGGQ IE+T K+RQAKALI + +E+DGGV+ +N K
Sbjct: 123 EDVIQDIDVLLLMSVNPGFGGQSFIENTYKKVRQAKALIEQVEAHALIEIDGGVSLKNAK 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+LV+AGAD LV GS FN + + +LKK+ L
Sbjct: 183 ALVEAGADALVAGSFIFNATNP---TQTIAELKKTVL 216
>gi|134299572|ref|YP_001113068.1| ribulose-phosphate 3-epimerase [Desulfotomaculum reducens MI-1]
gi|134052272|gb|ABO50243.1| ribulose-5-phosphate 3-epimerase [Desulfotomaculum reducens MI-1]
Length = 218
Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 149/218 (68%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ L + + + +AGA+ +H DVMDG FVPNI+ G ++++LR S+ V
Sbjct: 2 IKIAPSILSADFANLAQSVQVVEQAGAEYLHIDVMDGHFVPNITIGPLIVKALRPNSNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ D+++ AG D++ H E+ PH+ RSL I +G K GVA+NP TP+
Sbjct: 62 FDVHLMINNPDAYVPEFIKAGADLVCVHAEACPHLHRSLSQIKELGAKVGVALNPHTPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E V+ +D++L+MTVNPGFGGQ+ I +PKI+ +I +R ++ +E+DGG+ +
Sbjct: 122 VIEYVLPMLDLVLLMTVNPGFGGQKFIPEVLPKIKMLSNMIQERGLATEIEIDGGINTET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ QAGA++LV GS+ F G + A+ + D++KSA
Sbjct: 182 APLVAQAGANVLVAGSAIF---GATNPAQAVADIRKSA 216
>gi|309378613|emb|CBX22791.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 227
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 141/206 (68%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 3 AYRIAPSILSADFARLGEEVANVISAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYASV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S HI RSL I +G + G+ +NP TPV
Sbjct: 63 PIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDIGCRAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
+LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ R I++EVDGG
Sbjct: 123 YLLENVLDRLDMVLLMSVNPGFGGQGFIPHTLEKIRRVRAMLDAYEAQSGRHIAIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI ++ AGAD V GS+ F +
Sbjct: 183 IKTDNIAAVAAAGADTFVAGSAIFGK 208
>gi|114571464|ref|YP_758144.1| ribulose-5-phosphate 3-epimerase [Maricaulis maris MCS10]
gi|114341926|gb|ABI67206.1| ribulose-5-phosphate 3-epimerase [Maricaulis maris MCS10]
Length = 219
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 150/220 (68%), Gaps = 4/220 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
+ P+I I PSIL+ADF++LG+E+ I AGA IH DVMDG FVPN++ G V+++LR +
Sbjct: 2 VNPAI-ISPSILSADFAKLGDEVRAIDAAGADWIHIDVMDGHFVPNLTIGPAVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMI+ +D +I ADAG DIIT HPE+ PH R+++ I A G K G A+NP
Sbjct: 61 SKKPFDVHLMITPVDPYIQAFADAGADIITAHPEAGPHFHRTVQAIKATGAKAGAALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +++ V+DE+D+IL+M+VNPGFGGQ I S + KI KA I +R +S +EVDGGV
Sbjct: 121 TPVEVIDYVLDELDLILVMSVNPGFGGQSFITSQLKKIEALKARIDQRGLSTMIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + + AGA LV GS+ F + G +Y ++ L++
Sbjct: 181 NPQTARDCLDAGASALVAGSAVF-KGGPDAYRDNISALRR 219
>gi|84684589|ref|ZP_01012490.1| ribulose-phosphate 3-epimerase [Maritimibacter alkaliphilus
HTCC2654]
gi|84667568|gb|EAQ14037.1| ribulose-phosphate 3-epimerase [Rhodobacterales bacterium HTCC2654]
Length = 231
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 134/199 (67%), Gaps = 1/199 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ GEEI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 SIKIAPSILSADFANFGEEIRAIEAQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ A+AG DI+T H E+ PH R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAYAEAGADILTAHIEAGPHTHRTLQAIRGAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E ++D D+I +MTVNPGFGGQ+ I+ T K+R+ + +IG R + +E+DGGV
Sbjct: 126 DAVEHLLDLTDLICVMTVNPGFGGQKFIDMTA-KVRRLREMIGDRPVHIEIDGGVDPTTA 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
+V+AGAD LV GS+ F
Sbjct: 185 PLVVEAGADALVAGSAVFK 203
>gi|257452463|ref|ZP_05617762.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_5R]
gi|317059004|ref|ZP_07923489.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_5R]
gi|313684680|gb|EFS21515.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_5R]
Length = 212
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 145/214 (67%), Gaps = 6/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DFSRLGEEI I +A A IH DVMDG FVPN++FG +I+S+R Y++
Sbjct: 2 EIKIAPSILSSDFSRLGEEIVAIDQAKADYIHIDVMDGIFVPNLTFGPPIIKSIRKYTNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI + +I AG DIIT H ES+ H+ R ++ I + G K V++NP T
Sbjct: 62 IFDVHLMIDKPERYIEDYVKAGADIITVHAESTIHLHRVIQQIKSFGVKAAVSLNPSTSE 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+L+ VI ++DM+L+M+VNPGFGGQ+ I + + KI+ +A+ + I +EVDGG+T I
Sbjct: 122 EVLKYVIQDLDMVLVMSVNPGFGGQKFIPAVVDKIKAIRAM--REDIEIEVDGGITDATI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+S ++AGA V GS F+ +YA+R+ +LK
Sbjct: 180 QSCIEAGATTFVAGSYVFSG----NYAERIANLK 209
>gi|317051359|ref|YP_004112475.1| ribulose-phosphate 3-epimerase [Desulfurispirillum indicum S5]
gi|316946443|gb|ADU65919.1| ribulose-phosphate 3-epimerase [Desulfurispirillum indicum S5]
Length = 215
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 149/216 (68%), Gaps = 7/216 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RLGE+I T GA IH DVMDG FVPNI+ G V+ SL+ ++
Sbjct: 2 IRIAPSILSADFARLGEDIDRCT--GADLIHVDVMDGHFVPNITIGPPVVASLKKHTSVP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI++ ++ A AG DIIT H ES H+ R++ + A+G++ GV++NP TP+
Sbjct: 60 LDVHLMIANPQQYVEAFAAAGADIITLHAESDVHLHRAIHQVKALGRQVGVSLNPATPLC 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++E+V+ ++DM+LIM+VNPGFGGQ+ I++++ KIR+ +A+I + IS+EVDGGVT N
Sbjct: 120 MIEEVLPDLDMVLIMSVNPGFGGQKFIDASLDKIRRLRAMISATGKDISIEVDGGVTMDN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I + +AGAD V GS+ F+ Y +N L++
Sbjct: 180 IAQIHRAGADTFVAGSAIFSTP---DYGHTINALRQ 212
>gi|315224610|ref|ZP_07866435.1| ribulose-phosphate 3-epimerase [Capnocytophaga ochracea F0287]
gi|314945395|gb|EFS97419.1| ribulose-phosphate 3-epimerase [Capnocytophaga ochracea F0287]
Length = 216
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 143/218 (65%), Gaps = 7/218 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L + + + + A H D+MDG FVPNIS+G V+ + ++ D
Sbjct: 3 LAPSLLAADFGNLQQAVEMVNASEADWFHIDIMDGVFVPNISYGMPVLSVIHKHATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I+ A G DI+T H E H+ R+++ I A G K GVA+NP TPVA+L
Sbjct: 63 VHLMIIDPDRYISTFAKLGSDILTVHYEVCTHLHRTIQAIKAEGMKAGVALNPHTPVALL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
EDVI +ID++L+M+VNPGFGGQ IE+T K+RQAKALI G ++ +E+DGGV+ +N
Sbjct: 123 EDVIQDIDVLLLMSVNPGFGGQSFIENTYKKVRQAKALIEQVGAHAL-IEIDGGVSLKNA 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
K+LV+AGAD LV GS FN + + +LKK+ L
Sbjct: 182 KALVEAGADALVAGSFIFNATNP---TQTIAELKKTVL 216
>gi|238926262|ref|ZP_04658022.1| ribulose-phosphate 3-epimerase [Selenomonas flueggei ATCC 43531]
gi|238885942|gb|EEQ49580.1| ribulose-phosphate 3-epimerase [Selenomonas flueggei ATCC 43531]
Length = 236
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+I I PSIL+ADF+ LG E+ + +AGA+ IH DVMDG FVPNI+ GA V+ SLR S
Sbjct: 23 PTI-IAPSILSADFANLGAEVRRVEEAGAEYIHIDVMDGTFVPNITMGACVVESLRKVSK 81
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+VFD HLM+ ++HI A AG DIITFH E++ H R ++ I A G + GVA+NP T
Sbjct: 82 AVFDVHLMVEHPETHIESFARAGADIITFHVEATRHAHRVIQQIKAAGCRAGVALNPGTS 141
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ LE++ID++DM+L+MTVNPGFGGQ+ IE+T+ KI I + ++ +EVDGG+ +
Sbjct: 142 IYTLEELIDDVDMVLLMTVNPGFGGQKFIENTLGKIHALYHTIEGNELNVDIEVDGGINA 201
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
+S+ AGA++LV GS +
Sbjct: 202 ETAESVRSAGANVLVAGSYIY 222
>gi|307946969|ref|ZP_07662304.1| ribulose-phosphate 3-epimerase [Roseibium sp. TrichSKD4]
gi|307770633|gb|EFO29859.1| ribulose-phosphate 3-epimerase [Roseibium sp. TrichSKD4]
Length = 233
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 134/199 (67%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSIL+ADF+ G+EI I G +H DVMDG FVPN++FG + +++R + +
Sbjct: 6 SLKIAPSILSADFANFGKEIEAIEAEGCDWVHVDVMDGHFVPNLTFGPPLCKAIRKHIKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I A+AG DIIT H E+ PH R+L+ I A GKK G+A+NP TPV
Sbjct: 66 VMDVHLMIAPVDPYIEAFAEAGADIITAHLEAGPHTHRTLQAIRATGKKAGLALNPGTPV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++D D+ IMTVNPGFGGQ+ I + + ++R+ +A+IG R I +E+DGGV
Sbjct: 126 EAAAPLLDLCDLACIMTVNPGFGGQKFIHTQVEQVRKLRAMIGDRPIHIEIDGGVDPVTA 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGAD+LV GS+ F
Sbjct: 186 PLVAEAGADVLVAGSAVFK 204
>gi|222054191|ref|YP_002536553.1| Ribulose-phosphate 3-epimerase [Geobacter sp. FRC-32]
gi|221563480|gb|ACM19452.1| Ribulose-phosphate 3-epimerase [Geobacter sp. FRC-32]
Length = 221
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 143/217 (65%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 3 KIAPSILSADFSRLGDEVRAVEAAGADYIHIDVMDGSFVPNITIGPLVVEAVRRVTRLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E++ H+ R+++ I + GKK GV++NP T +
Sbjct: 63 DVHLMIDAPDRYIGEFAKAGADIIVVHAEATNHLHRTVQLIKSFGKKAGVSLNPATSLHC 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ ++DE+D++L+MTVNPGFGGQ I++ +PKI+ + L+ K+ + LEVDGGV NI
Sbjct: 123 LDHILDELDLVLLMTVNPGFGGQSFIDACLPKIQALRGLLDKKGLETELEVDGGVKEANI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ F G YA + ++K A
Sbjct: 183 AQIAHAGADVFVAGSAVF---GSSDYAATIAEMKLRA 216
>gi|301155034|emb|CBW14497.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus parainfluenzae
T3T1]
Length = 223
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 149/225 (66%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GIKAPIDVHLMVKPVDRIIPDFAKAGADYITFHPEASEHIDRSLQLIRDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ + ST+ K++QA+ LI + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVILLMSVNPGFGGQSFLPSTLRKLQQARRLIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKEDNIAEIAAAGADMFVAGSAIF---GKPDY-KQIIDQMRAQLA 220
>gi|78357674|ref|YP_389123.1| ribulose-5-phosphate 3-epimerase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220079|gb|ABB39428.1| ribulose-5-phosphate 3-epimerase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 217
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 143/214 (66%), Gaps = 5/214 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L++D+ RL +E++ + AG +H+DVMDG FVPNI+ GA +I+ LR S FD H
Sbjct: 5 PSLLSSDYGRLADELAALEDAGLSWVHWDVMDGMFVPNITLGAPIIKKLRKASGLFFDVH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+ + + +I ADAG D++ H E++ H+ R+L I MG + GVA+NP TP+ +LE
Sbjct: 65 LMVQAPERYIADFADAGADMLVVHAEATNHLERTLSEIRRMGVQCGVALNPHTPLCVLEY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
V+D++DM+LIM+VNPGFGGQ+ I T+ KI + A+I R + ++VDGGV N L
Sbjct: 125 VLDQLDMVLIMSVNPGFGGQKFIPFTMRKIEELSAMITARGLKTLIQVDGGVDPENTPEL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+ GAD+LV GS+FF G Y +R + + +A
Sbjct: 185 VRRGADVLVSGSAFF---GHPPYRQRHDAFQAAA 215
>gi|254419613|ref|ZP_05033337.1| ribulose-phosphate 3-epimerase [Brevundimonas sp. BAL3]
gi|196185790|gb|EDX80766.1| ribulose-phosphate 3-epimerase [Brevundimonas sp. BAL3]
Length = 247
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 145/204 (71%), Gaps = 4/204 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DF+RLGEE+ + AGA IH DVMDG FVPNI+ G D+++++R ++ FD
Sbjct: 33 ICPSILASDFARLGEEVRALEAAGADWIHVDVMDGHFVPNITLGPDIVKAIRPHTSLPFD 92
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D + DAG D++T HPES PH+ R+L I +G K GV NP TP++IL
Sbjct: 93 VHLMVAPVDPWLEAYRDAGADLLTVHPESGPHLHRTLARIRQLGAKAGVVFNPATPLSIL 152
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+V+D +D++LIM+VNPGFGGQ+ I+S++ KI A+A++ + + L+VDGGVTS N
Sbjct: 153 EEVVDLVDLVLIMSVNPGFGGQKFIDSSLRKIAGARAILDRAGSTAHLQVDGGVTSANAA 212
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
+ V AGAD LV GS F KG+ +
Sbjct: 213 ACVAAGADALVAGSFVF--KGDYA 234
>gi|70732919|ref|YP_262690.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens Pf-5]
gi|68347218|gb|AAY94824.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens Pf-5]
Length = 224
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM++ +D I +AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDAHLMVTPVDRIIGDFIEAGATYITFHPEATLHVDRSLQMIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V NI+ + AGAD V GS+ FN
Sbjct: 180 VNVGNIREIAAAGADTFVAGSAIFN 204
>gi|254475585|ref|ZP_05088971.1| ribulose-phosphate 3-epimerase [Ruegeria sp. R11]
gi|214029828|gb|EEB70663.1| ribulose-phosphate 3-epimerase [Ruegeria sp. R11]
Length = 229
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 145/221 (65%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 QIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPMAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 VMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D D+I +MTVNPGFGGQ+ I+ T KIR + +IG R I +E+DGGV +
Sbjct: 126 EAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-GKIRALRDMIGDRPIHIEIDGGVDPKTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEI----SYAKRLNDLKKSA 220
+ +AGAD+LV GS+ F + G + +Y + + +++ +A
Sbjct: 185 PLVAEAGADVLVAGSAVF-KGGSVDNPEAYGENIRNIRAAA 224
>gi|219871883|ref|YP_002476258.1| ribulose-phosphate 3-epimerase [Haemophilus parasuis SH0165]
gi|219692087|gb|ACL33310.1| ribulose-phosphate 3-epimerase [Haemophilus parasuis SH0165]
Length = 224
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLG++++ + KAGA IHFDVMD +VPN++FG + ++LR Y +
Sbjct: 8 IAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHYVPNLTFGPAICKALRDYGITCLI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM +D I A AG DIITFHPE++ HI RSL+ I G K+G+ NP TP++
Sbjct: 68 DVHLMAKPVDRLIPDFAKAGADIITFHPEATEHIDRSLQLIREHGCKSGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ + ST+ K+R+A+ I +I LEVDGGV NI
Sbjct: 128 LDYVMDKVDVILLMSVNPGFGGQAFLPSTLNKLREARRRIDASGFNIRLEVDGGVKVNNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +AGAD+ V GS+ F+Q
Sbjct: 188 AEIAEAGADMFVAGSAIFDQ 207
>gi|297583991|ref|YP_003699771.1| ribulose-phosphate 3-epimerase [Bacillus selenitireducens MLS10]
gi|297142448|gb|ADH99205.1| ribulose-phosphate 3-epimerase [Bacillus selenitireducens MLS10]
Length = 214
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSILAA+FS+LGEEI + AGA IH DVMDG FVPNI+FG + ++R +
Sbjct: 2 IKIAPSILAANFSKLGEEIQSAEAAGADYIHVDVMDGHFVPNITFGPLAVDAIRPLTSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I+ +AG D+I+ H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDQYISDFTNAGADLISVHVEACPHLHRTIQLIKSTGAKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+E +++++D++L+MTVNPGFGGQ I S +PKI + KAL +R + +EVDGGV +
Sbjct: 122 AIEPILEDVDLVLLMTVNPGFGGQSFIHSVLPKIAEVKALADQRHPELEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +AGA++LV GS+ F G+ K + +L+
Sbjct: 182 ARLCAEAGANVLVAGSAVF---GKTDRKKAVEELR 213
>gi|313885011|ref|ZP_07818763.1| ribulose-phosphate 3-epimerase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619702|gb|EFR31139.1| ribulose-phosphate 3-epimerase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 223
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 146/214 (68%), Gaps = 5/214 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG+ I + +AG IH DVMDG FVPNISFG V +++R +D
Sbjct: 2 IKIAPSILSADFANLGQAIQAMDQAGCDYIHIDVMDGSFVPNISFGPMVYQAVRPLTDKT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLM+ + +++++A AG DII+ H E++ HI +SL I A+GKK GV +NP T ++
Sbjct: 62 FDCHLMVDQPERYLDMVAAAGADIISVHVEATKHIYQSLSMIKALGKKAGVVLNPGTDLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ ++ D++LIMTVNPGFGGQ+ I++++ KI+Q K + ++ + +EVDGG+
Sbjct: 122 QIQPILHLCDLVLIMTVNPGFGGQKFIQASLEKIKQLKVMREEKGLDFEIEVDGGINFET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K+ QAGAD+LV GS FNQ +AK + D
Sbjct: 182 GKACAQAGADVLVSGSFLFNQT---DWAKAILDF 212
>gi|110800106|ref|YP_696422.1| ribulose-phosphate 3-epimerase [Clostridium perfringens ATCC 13124]
gi|110674753|gb|ABG83740.1| ribulose-phosphate 3-epimerase [Clostridium perfringens ATCC 13124]
Length = 217
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSVDMVLIMSVNPGFGGQSFIPYSLNKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
NIK +V+AGA++LV GS+ F +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKE 203
>gi|264680604|ref|YP_003280514.1| ribulose-phosphate 3-epimerase [Comamonas testosteroni CNB-2]
gi|262211120|gb|ACY35218.1| ribulose-phosphate 3-epimerase [Comamonas testosteroni CNB-2]
Length = 226
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 150/227 (66%), Gaps = 11/227 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + ++L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S + D HLM+ +D A AG D I+FHP++S H+ RS++ I A G K G
Sbjct: 61 SVTPDGKPVPIDVHLMVQPVDDLATAFAKAGADYISFHPDASQHVHRSVQNIKAHGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
+ NP + +L+ +I++ID+IL+M+VNPGFGGQ I+ST+ KI +A+ LI + I L
Sbjct: 121 LVFNPAASLEVLDWMIEDIDLILLMSVNPGFGGQSFIDSTLRKIEKARKLIDASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
EVDGG+ NI+++ AGAD V GS+ F G+ Y ++ ++K+
Sbjct: 181 EVDGGIKEANIRAVADAGADTFVAGSAIF---GKPDYKAVIDTMRKN 224
>gi|297181773|gb|ADI17954.1| pentose-5-phosphate-3-epimerase [uncultured Desulfobacterales
bacterium HF0200_07G10]
Length = 255
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 141/213 (66%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFS+LG+E+ + +AGA IH DVMDG FVPNI+ G V+ ++R ++ D
Sbjct: 44 IAPSILAADFSKLGDEVKAVEQAGADWIHVDVMDGHFVPNITIGPMVVEAIRKVTELPLD 103
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++I AG DIIT H E+ PH+ R+++ I GV +NP TP++ L
Sbjct: 104 VHLMIENANNYIGEFISAGSDIITVHVEACPHLNRTVQLIKDQEVMVGVVLNPATPLSSL 163
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+++ EIDM+LIM+VNPGFGGQ+ I S + KI ++ I+LEVDGGVT N +
Sbjct: 164 EEILHEIDMVLIMSVNPGFGGQKFIPSMMDKIENLSEIMTHYDHPIALEVDGGVTPDNAE 223
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+VQAGA +LV GSS FN K Y K +N L+
Sbjct: 224 DIVQAGASVLVAGSSIFNTK---DYKKAINSLR 253
>gi|299532833|ref|ZP_07046220.1| ribulose-phosphate 3-epimerase [Comamonas testosteroni S44]
gi|298719057|gb|EFI60027.1| ribulose-phosphate 3-epimerase [Comamonas testosteroni S44]
Length = 226
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 150/227 (66%), Gaps = 11/227 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + ++L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S + D HLM+ +D A AG D I+FHP++S H+ RS++ I A G K G
Sbjct: 61 SVTPDGKPVPIDVHLMVQPVDDLATAFAKAGADYISFHPDASQHVHRSVQNIKAHGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
+ NP + +L+ +I++ID+IL+M+VNPGFGGQ I+ST+ KI +A+ LI + I L
Sbjct: 121 LVFNPAASLEVLDWMIEDIDLILLMSVNPGFGGQSFIDSTLRKIERARKLIDASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
EVDGG+ NI+++ AGAD V GS+ F G+ Y ++ ++K+
Sbjct: 181 EVDGGIKEANIRAVADAGADTFVAGSAIF---GKPDYKAVIDTMRKN 224
>gi|168210631|ref|ZP_02636256.1| ribulose-phosphate 3-epimerase [Clostridium perfringens B str. ATCC
3626]
gi|170711300|gb|EDT23482.1| ribulose-phosphate 3-epimerase [Clostridium perfringens B str. ATCC
3626]
Length = 217
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIPYSLDKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
NIK +V+AGA++LV GS+ F +
Sbjct: 182 NIKKIVEAGANVLVAGSAVFKE 203
>gi|110803689|ref|YP_699022.1| ribulose-phosphate 3-epimerase [Clostridium perfringens SM101]
gi|110684190|gb|ABG87560.1| ribulose-phosphate 3-epimerase [Clostridium perfringens SM101]
Length = 217
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 143/202 (70%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H ES HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYESDRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIPYSLDKIKEVKEIAKACGKEDLLIQVDGGVGEN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
NIK +V+AGA++LV GS+ F +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKE 203
>gi|254481066|ref|ZP_05094312.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2148]
gi|214038861|gb|EEB79522.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2148]
Length = 222
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 146/214 (68%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ N+ +AGA +HFDVMD +VPN++ G V ++LR++ +
Sbjct: 6 IAPSILSADFARLGEEVDNVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRNHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +DS I A+AG ITFHP++S H+ RSL+ I + G ++G+ NP +
Sbjct: 66 DVHLMVSPVDSLIGDFAEAGASFITFHPDASTHVDRSLQMIRSAGCQSGLVFNPAMGLDA 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I T+ K+R+A+ LI I LE+DGGV+++NI
Sbjct: 126 LKYVMDKVDMILLMSVNPGFGGQSFIPGTLDKLREARTLIDASGYDIRLEIDGGVSAKNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD V GS+ FNQ YA + +++
Sbjct: 186 AEIAAAGADTFVAGSAIFNQP---DYATVIAEMR 216
>gi|261254107|ref|ZP_05946680.1| ribulose-phosphate 3-epimerase [Vibrio orientalis CIP 102891]
gi|260937498|gb|EEX93487.1| ribulose-phosphate 3-epimerase [Vibrio orientalis CIP 102891]
Length = 223
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADMARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++DMIL+M+VNPGFGGQ I +T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEYIMDKVDMILLMSVNPGFGGQSFIPNTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K + +AGAD+ V GS+ FNQ
Sbjct: 186 KEIAEAGADMFVAGSAIFNQ 205
>gi|18310718|ref|NP_562652.1| ribulose-phosphate 3-epimerase [Clostridium perfringens str. 13]
gi|168214213|ref|ZP_02639838.1| ribulose-phosphate 3-epimerase [Clostridium perfringens CPE str.
F4969]
gi|168217023|ref|ZP_02642648.1| ribulose-phosphate 3-epimerase [Clostridium perfringens NCTC 8239]
gi|182625878|ref|ZP_02953644.1| ribulose-phosphate 3-epimerase [Clostridium perfringens D str.
JGS1721]
gi|18145399|dbj|BAB81442.1| ribulose-phosphate 3-epimerase [Clostridium perfringens str. 13]
gi|170714293|gb|EDT26475.1| ribulose-phosphate 3-epimerase [Clostridium perfringens CPE str.
F4969]
gi|177908912|gb|EDT71404.1| ribulose-phosphate 3-epimerase [Clostridium perfringens D str.
JGS1721]
gi|182380927|gb|EDT78406.1| ribulose-phosphate 3-epimerase [Clostridium perfringens NCTC 8239]
Length = 217
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIPYSLDKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
NIK +V+AGA++LV GS+ F +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKE 203
>gi|169342691|ref|ZP_02863732.1| ribulose-phosphate 3-epimerase [Clostridium perfringens C str.
JGS1495]
gi|169299197|gb|EDS81267.1| ribulose-phosphate 3-epimerase [Clostridium perfringens C str.
JGS1495]
Length = 217
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 144/202 (71%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKVGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIPYSLDKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
NIK +V+AGA++LV GS+ F +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKE 203
>gi|41057048|ref|NP_957651.1| ribulose-phosphate 3-epimerase [Bacillus methanolicus]
gi|40074233|gb|AAR39397.1| putative ribulose-5-phosphate 3-epimerase [Bacillus methanolicus
MGA3]
Length = 214
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 142/202 (70%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+A+F+RL EEI ++ + GA IH DVMDG FVPNI+ G ++ ++R ++
Sbjct: 2 IKIAPSILSANFARLEEEIKDVERGGADYIHVDVMDGHFVPNITIGPLIVEAIRPVTNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ H+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDQYIGTFAKAGADILSVHVEACTHLHRTIQYIKSEGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E VI+++D++L+MTVNPGFGGQ I S +PKI+Q ++ +++ + +EVDGGV
Sbjct: 122 MIEHVIEDVDLVLLMTVNPGFGGQSFIHSVLPKIKQVANIVKEKNLQVEIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
K V+AGA++LV GS+ +NQ+
Sbjct: 182 AKLCVEAGANVLVAGSAIYNQE 203
>gi|6094119|sp|P51012|RPE_RHOCA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2564973|gb|AAB82049.1| pentose-5-phosphate-3-epimerase [Rhodobacter capsulatus]
Length = 228
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 137/205 (66%), Gaps = 2/205 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G EI I GA +H DVMDG FVPN++FG + + R + +
Sbjct: 6 SIKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS +D++I+ A AG D++T H E+ PHI R+L+ I A G K+GVAINP TP
Sbjct: 66 VMDVHLMISPVDAYIDAYAQAGADVLTAHVEAGPHIHRTLQAIRAAGMKSGVAINPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E V+D D++ +MTVNPGFGGQ+ I+ T K+R+ +A+IG R + +E+DGG+
Sbjct: 126 EAIEHVLDIADVVCVMTVNPGFGGQKYIDMTA-KVRKLRAMIGDRPVHIEIDGGMDPVTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
+ AGAD+ V GS F + G +S
Sbjct: 185 PLMAAAGADVFVAGSGVF-KGGSVS 208
>gi|262066607|ref|ZP_06026219.1| ribulose-phosphate 3-epimerase [Fusobacterium periodonticum ATCC
33693]
gi|291379671|gb|EFE87189.1| ribulose-phosphate 3-epimerase [Fusobacterium periodonticum ATCC
33693]
Length = 215
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 145/220 (65%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA IH DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTKGIKIAPSILSSDFSKLGEELVAIDKAGADYIHIDVMDGEFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I A+G K GV++NP
Sbjct: 61 TELVFDVHLMIDRPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKALGVKVGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TSEDVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RADIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ Y +R++ LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----DYKERIDLLKAKA 214
>gi|294677365|ref|YP_003577980.1| ribulose-phosphate 3-epimerase [Rhodobacter capsulatus SB 1003]
gi|294476185|gb|ADE85573.1| ribulose-phosphate 3-epimerase-1 [Rhodobacter capsulatus SB 1003]
Length = 228
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 133/199 (66%), Gaps = 1/199 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G EI I GA +H DVMDG FVPN++FG + + R + +
Sbjct: 6 SIKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS +D++I+ A AG D++T H E+ PHI R+L+ I A G K+GVAINP TP
Sbjct: 66 VMDVHLMISPVDAYIDAYAQAGADVLTAHVEAGPHIHRTLQAIRAAGMKSGVAINPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E V+D D++ +MTVNPGFGGQ+ I+ T K+R+ +A+IG R + +E+DGG+
Sbjct: 126 EAIEHVLDIADVVCVMTVNPGFGGQKYIDMTA-KVRKLRAMIGDRPVHIEIDGGMDPVTA 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ AGAD+ V GS F
Sbjct: 185 PLMAAAGADVFVAGSGVFK 203
>gi|260431222|ref|ZP_05785193.1| ribulose-phosphate 3-epimerase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415050|gb|EEX08309.1| ribulose-phosphate 3-epimerase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 229
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 143/220 (65%), Gaps = 6/220 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +V
Sbjct: 7 IKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVKTV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I ADAG D +T H E+ PH R+L+ I A G K GVA+NP TP
Sbjct: 67 MDVHLMITPVDPYIQAYADAGADYLTAHVEAGPHTHRTLQAIRAAGMKAGVALNPGTPAE 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E ++D D++ +MTVNPGFGGQ+ I+ T K+R+ + +IG R + +E+DGGV +
Sbjct: 127 AVEHLLDLADLVCVMTVNPGFGGQKFIDMTA-KVRRLREMIGDRPVHIEIDGGVDTTTAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+ AGAD+LV GS+ F + G ++ Y + + ++ +A
Sbjct: 186 LVAAAGADVLVAGSAVF-KGGSVANPEIYGQNIRAIRAAA 224
>gi|153874595|ref|ZP_02002755.1| Ribulose-phosphate 3-epimerase [Beggiatoa sp. PS]
gi|152068942|gb|EDN67246.1| Ribulose-phosphate 3-epimerase [Beggiatoa sp. PS]
Length = 223
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 139/203 (68%), Gaps = 3/203 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ I PSIL+ADF+RLG+E++N+ ++GA +HFDVMD +VPN++ G + +LR +
Sbjct: 2 PNYMIAPSILSADFARLGDEVTNVLQSGADIVHFDVMDNHYVPNLTIGPLICEALRKHGV 61
Query: 63 SV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG ITFHPE S HI RSL+ +H G K+G+ NP T
Sbjct: 62 TAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEGSEHIDRSLQLVHDCGCKSGLVFNPAT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ L+ V+D++DM+L+M+VNPGFGGQ I +T+ K+R+A+ LI R I LE+DGGV
Sbjct: 122 PLDYLKYVMDKVDMVLLMSVNPGFGGQSFIPATLDKLREARQLIDSSGRDIRLEIDGGVK 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
NI+ + +AGAD V GS+ F+
Sbjct: 182 VNNIREIAEAGADTFVAGSAIFS 204
>gi|28899515|ref|NP_799120.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus RIMD
2210633]
gi|260366346|ref|ZP_05778792.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus K5030]
gi|260879407|ref|ZP_05891762.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AN-5034]
gi|260896874|ref|ZP_05905370.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus Peru-466]
gi|260902020|ref|ZP_05910415.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AQ4037]
gi|28807751|dbj|BAC61004.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus RIMD
2210633]
gi|308086289|gb|EFO35984.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus Peru-466]
gi|308089707|gb|EFO39402.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AN-5034]
gi|308109414|gb|EFO46954.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AQ4037]
gi|308112695|gb|EFO50235.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus K5030]
Length = 223
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 148/219 (67%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP+A
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASDHVDRTLQLIKEHGCKAGVVLNPATPLAH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + +AGAD+ V GS+ F G++ Y K++ D ++ LA
Sbjct: 186 REIAEAGADMFVAGSAIF---GQLDY-KQVIDQMRTELA 220
>gi|139439667|ref|ZP_01773080.1| Hypothetical protein COLAER_02108 [Collinsella aerofaciens ATCC
25986]
gi|133775008|gb|EBA38828.1| Hypothetical protein COLAER_02108 [Collinsella aerofaciens ATCC
25986]
Length = 223
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 149/217 (68%), Gaps = 7/217 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PS+L+AD + L E+ I AGA +HFDVMDG F N++FG D++++++ +D
Sbjct: 3 SIKIAPSVLSADMANLKGELDKI--AGADYVHFDVMDGHFTGNLTFGVDILKAVKRSTDV 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+S+ D ++ ADAG D+IT H E+S H+ R+L + G K GV +NP TPV
Sbjct: 61 PVDAHLMVSNPDETVDWYADAGADMITVHYEASTHLHRTLTHLQQRGVKAGVVLNPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LE +ID +DM+L+M+VNPGFGGQ I TI K+++ KA+ + +S +EVDGG++S+
Sbjct: 121 CVLESIIDVVDMVLLMSVNPGFGGQSFIPGTIAKLQELKAMCERHGVSPLIEVDGGISSK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLND 215
NI +V+AGA++LV GS+ F + E++ ++L +
Sbjct: 181 NIAEVVKAGANVLVAGSAVFKSEDPAAEVALLQKLGN 217
>gi|326560286|gb|EGE10674.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 7169]
gi|326563631|gb|EGE13883.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 103P14B1]
gi|326565292|gb|EGE15477.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 12P80B1]
gi|326566396|gb|EGE16546.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis BC1]
gi|326570942|gb|EGE20966.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis BC7]
Length = 226
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 139/206 (67%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSIL+ADF+RLG +I ++ +AGA +HFDVMD +VPN++FG+ + ++L+ Y
Sbjct: 1 MTQPFLIAPSILSADFARLGADIESVLEAGADVVHFDVMDNHYVPNLTFGSMICQALKDY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I G DIITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 61 GITAPIDVHLMVKPVDGMIEQFLKVGADIITFHPEASEHIDRSLQLIKDGGAKCGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ +D++D IL+M+VNPGFGGQ+ I++T+ K+ + +I R I LEVDGG
Sbjct: 121 ATPLYYLDHTLDKVDQILLMSVNPGFGGQKFIDATLDKLATVRQMIDDSGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+++ +AGAD+ V GS+ FNQ
Sbjct: 181 VNVANIRTIGEAGADMFVAGSAIFNQ 206
>gi|329118961|ref|ZP_08247656.1| ribulose-phosphate 3-epimerase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464989|gb|EGF11279.1| ribulose-phosphate 3-epimerase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 226
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 138/205 (67%), Gaps = 6/205 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +++ Y+
Sbjct: 4 FRIAPSILSADFARLGEEVTRVVEAGADLIHFDVMDNHYVPNLTFGPMVCTAIKPYAAVP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +DS I ADAG DIITFHPE+S H RSL I G + G+ +NP T V+
Sbjct: 64 VDVHLMVEPVDSLIAAFADAGADIITFHPEASRHADRSLALIRERGCQAGLVLNPATSVS 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGV 178
+LE+V+D +DM+L+M+VNPGFGGQ I T K+RQ +AL+ R I+LEVDGG+
Sbjct: 124 VLENVLDRLDMVLLMSVNPGFGGQSFIPHTFAKLRQTRALLDAYEAQSGRRIALEVDGGI 183
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQ 203
+ NI AGAD V GS+ F Q
Sbjct: 184 KTANIAQAAAAGADTFVAGSAIFGQ 208
>gi|289209524|ref|YP_003461590.1| ribulose-phosphate 3-epimerase [Thioalkalivibrio sp. K90mix]
gi|288945155|gb|ADC72854.1| ribulose-phosphate 3-epimerase [Thioalkalivibrio sp. K90mix]
Length = 229
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 142/211 (67%), Gaps = 4/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR + +
Sbjct: 7 IAPSILSADFARLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCDALRKHGVTAPI 66
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S HI R+L+ IH+ G K G+ NP TP++
Sbjct: 67 DVHLMVKPVDRIIPDFAQAGASYITFHPEASDHIDRTLQLIHSEGCKAGLVFNPATPLSY 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D++DMIL+M+VNPGFGGQ+ I +T+ K+R A+ +I + R I LE+DGGV + NI
Sbjct: 127 LEYVMDKVDMILLMSVNPGFGGQKFIPATLDKLRAARKMIEESGRDIRLEIDGGVKADNI 186
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + AGAD V GS+ F G + A R N
Sbjct: 187 REIKAAGADTFVAGSAIFG-AGNDADANRYN 216
>gi|91227278|ref|ZP_01261703.1| ribulose-phosphate 3-epimerase [Vibrio alginolyticus 12G01]
gi|269964443|ref|ZP_06178684.1| Ribulose-phosphate 3-epimerase [Vibrio alginolyticus 40B]
gi|91188672|gb|EAS74961.1| ribulose-phosphate 3-epimerase [Vibrio alginolyticus 12G01]
gi|269830781|gb|EEZ84999.1| Ribulose-phosphate 3-epimerase [Vibrio alginolyticus 40B]
Length = 223
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 147/219 (67%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+A
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASDHVDRTLQLIKEHGCQAGVVLNPATPLAS 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEFIMDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + +AGAD+ V GS+ F GE Y K++ D ++ LA
Sbjct: 186 REIAEAGADMFVAGSAIF---GEPDY-KQVIDQMRAELA 220
>gi|120556421|ref|YP_960772.1| ribulose-phosphate 3-epimerase [Marinobacter aquaeolei VT8]
gi|120326270|gb|ABM20585.1| ribulose-5-phosphate 3-epimerase [Marinobacter aquaeolei VT8]
Length = 228
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNPYL-IAPSILSADFARLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCEALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I + DAG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDDLIRMFIDAGASYITFHPEASNHIDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP++ ++ V+D++DM+L+M+VNPGFGGQ+ I T+ K+++A+ I +I LE+DGG
Sbjct: 120 ATPLSYMDYVMDKLDMVLLMSVNPGFGGQKFIPGTLDKLKEARKKIDASNYNIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V + NI+ + +AGAD V GS+ FN
Sbjct: 180 VKTDNIREIAEAGADTFVAGSAIFN 204
>gi|163803108|ref|ZP_02196992.1| ribulose-phosphate 3-epimerase [Vibrio sp. AND4]
gi|159173100|gb|EDP57932.1| ribulose-phosphate 3-epimerase [Vibrio sp. AND4]
Length = 223
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 145/214 (67%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP+A
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPATPLAH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE +ID++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEFIIDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD+ V GS+ F+ E Y + +++++
Sbjct: 186 REIAEAGADMFVAGSAIFS---EPDYKQVIDNMR 216
>gi|56695681|ref|YP_166032.1| ribulose-phosphate 3-epimerase [Ruegeria pomeroyi DSS-3]
gi|56677418|gb|AAV94084.1| ribulose-phosphate 3-epimerase [Ruegeria pomeroyi DSS-3]
Length = 229
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 143/220 (65%), Gaps = 6/220 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G EI I GA +H DVMDG FVPN++FG +++ R Y +V
Sbjct: 7 IKIAPSILSADFANFGAEIRAIEAEGADWVHVDVMDGHFVPNLTFGPMAVKAFRPYVKTV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 67 MDVHLMIAPVDPYIDAYADAGADVLTAHIEAGPHIHRTLQAIRGAGMKAGVALNPGTPAE 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D D+I +MTVNPGFGGQ+ I+ T KI + + +IG R + +E+DGGV +
Sbjct: 127 SVAHLLDLTDLICVMTVNPGFGGQKFIDMTA-KIARLRQMIGDRPVHIEIDGGVDPKTAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
+ QAGAD+LV GS+ F + G + Y + + +++ +A
Sbjct: 186 LVAQAGADVLVAGSAVF-RGGSVDNPGVYGQNIAEIRAAA 224
>gi|261364653|ref|ZP_05977536.1| ribulose-phosphate 3-epimerase [Neisseria mucosa ATCC 25996]
gi|288567255|gb|EFC88815.1| ribulose-phosphate 3-epimerase [Neisseria mucosa ATCC 25996]
Length = 227
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 145/223 (65%), Gaps = 9/223 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MNQKFRIAPSILSADFARLGEEVTKVIEAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I G + G+ +NP
Sbjct: 61 ATVPIDVHLMVEPVDDLIQAFAKAGASIITFHPEASHHIDRSLSLIKDAGCQAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ + ++ + R I++EV
Sbjct: 121 TPTYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRTMLDQYEAQSGRHIAIEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
DGG+ + NI ++ AGAD V GS+ F G+ Y + +++
Sbjct: 181 DGGIKTDNIAAVAAAGADTFVAGSAIF---GKPDYKAVITEMR 220
>gi|257463683|ref|ZP_05628073.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D12]
gi|317061230|ref|ZP_07925715.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D12]
gi|313686906|gb|EFS23741.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D12]
Length = 212
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 144/214 (67%), Gaps = 6/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DFSRLGEEI I +A A IH DVMDG FVPN++FG VI+S+R Y++
Sbjct: 2 EIKIAPSILSSDFSRLGEEIVAIDQAKADYIHIDVMDGIFVPNLTFGPPVIKSIRKYTNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI + +I AG DIIT H ES+ H+ R ++ I + G K V++NP T
Sbjct: 62 IFDVHLMIDRPERYIEDYVKAGADIITVHAESTIHLHRVIQQIKSFGVKAAVSLNPSTSE 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+L+ +I ++DM+L+M+VNPGFGGQ I + I KI+ +A+ + I +EVDGG+T I
Sbjct: 122 EVLKYIIHDLDMVLVMSVNPGFGGQTFIPAVIDKIKAIRAM--REDIEIEVDGGITDTTI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ V+AGA V GS F+ +YA+R+ +LK
Sbjct: 180 QACVEAGASTFVAGSYVFSG----NYAERIANLK 209
>gi|192361209|ref|YP_001983126.1| ribulose-phosphate 3-epimerase [Cellvibrio japonicus Ueda107]
gi|190687374|gb|ACE85052.1| ribulose-phosphate 3-epimerase [Cellvibrio japonicus Ueda107]
Length = 233
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 147/216 (68%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSIL+ADF+RLGEE+S + AGA IHFDVMD +VPN++FG V ++LR+Y +
Sbjct: 15 FKIAPSILSADFARLGEEVSAVLAAGADIIHFDVMDNHYVPNLTFGPMVCKALRNYGITA 74
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I ADAG ITFHPE+S H+ RSL+ I G K G+ +NP + +
Sbjct: 75 PIDVHLMVEPVDDLIVQFADAGATYITFHPEASRHLDRSLQLIKGKGCKAGLVLNPASSL 134
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
++ V++++DM+L+M+VNPGFGGQQ I + K+R+A+ALI + I LEVDGGV
Sbjct: 135 EQIKYVLEKLDMLLLMSVNPGFGGQQFIPYVLDKLREARALIDRSGLPIRLEVDGGVGLS 194
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI+++ +AGAD V GS+ F G YA+ + +++
Sbjct: 195 NIRAVAEAGADTFVAGSAIF---GAEDYAQVIREMR 227
>gi|83950690|ref|ZP_00959423.1| ribulose-phosphate 3-epimerase [Roseovarius nubinhibens ISM]
gi|83838589|gb|EAP77885.1| ribulose-phosphate 3-epimerase [Roseovarius nubinhibens ISM]
Length = 229
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 144/223 (64%), Gaps = 6/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R + +
Sbjct: 6 AIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPQAVKAFRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP T
Sbjct: 66 VMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTSA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D D+I +MTVNPGFGGQ+ I+ T KI + +A+IG R + +E+DGGVT
Sbjct: 126 DAVAHLLDLTDVICVMTVNPGFGGQKFIDMTA-KIAELRAMIGDRPVHIEIDGGVTPETA 184
Query: 184 KSLVQAGADLLVVGSSFFN----QKGEISYAKRLNDLKKSALA 222
+V AGAD+LV GS F K E+ Y + + ++ +A A
Sbjct: 185 PLVVAAGADVLVAGSGVFKGGSVAKPEV-YGENIRAIRSAAEA 226
>gi|120601764|ref|YP_966164.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris DP4]
gi|120561993|gb|ABM27737.1| ribulose-5-phosphate 3-epimerase [Desulfovibrio vulgaris DP4]
Length = 222
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 144/208 (69%), Gaps = 5/208 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L++DF RL EE++ + AG K +H+DVMDG FVPNI++G VI LR S FD H
Sbjct: 5 PSLLSSDFGRLTEELAALEAAGVKWVHWDVMDGRFVPNITYGQPVISHLRKKSGLFFDVH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+ + ++ A AG D++ H E++ H++R+L I +G K GVA+NP TP+++L+
Sbjct: 65 LMVHEPERYLADFAKAGADMLVVHAEATNHLQRTLAEIRRLGCKAGVALNPHTPLSVLDY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
V++++DM+LIM+VNPGFGGQ+ + +T KIR+ +A++ R +S ++VDGGV N +L
Sbjct: 125 VLEDVDMVLIMSVNPGFGGQKFLPATYRKIRELRAMLDARGLSAHIQVDGGVDPSNTAAL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLN 214
V +GAD+LV GS+FF G Y +RL
Sbjct: 185 VDSGADVLVSGSAFF---GFPPYDQRLR 209
>gi|46580935|ref|YP_011743.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450355|gb|AAS97003.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234625|gb|ADP87479.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris RCH1]
Length = 222
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 144/208 (69%), Gaps = 5/208 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L++DF RL EE++ + AG K +H+DVMDG FVPNI++G VI LR S FD H
Sbjct: 5 PSLLSSDFGRLTEELAALEAAGVKWVHWDVMDGRFVPNITYGQPVISHLRKKSGLFFDVH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+ + ++ A AG D++ H E++ H++R+L I +G K GVA+NP TP+++L+
Sbjct: 65 LMVHEPERYLADFAKAGADMLVVHAEATNHLQRTLAEIRRLGCKAGVALNPHTPLSVLDY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
V++++DM+LIM+VNPGFGGQ+ + +T KIR +A++ R +S ++VDGGV N +L
Sbjct: 125 VLEDVDMVLIMSVNPGFGGQKFLPATYRKIRDLRAMLDARGLSAHIQVDGGVDPSNTAAL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLN 214
V++GAD+LV GS+FF G Y +RL
Sbjct: 185 VESGADVLVSGSAFF---GFPPYDQRLR 209
>gi|255262456|ref|ZP_05341798.1| ribulose-phosphate 3-epimerase [Thalassiobium sp. R2A62]
gi|255104791|gb|EET47465.1| ribulose-phosphate 3-epimerase [Thalassiobium sp. R2A62]
Length = 225
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 134/205 (65%), Gaps = 1/205 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 6 SIKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPATCAAIRPHIKG 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I A +G D+IT H E+ PHI R+L+ I G K GVA+NP TPV
Sbjct: 66 VMDVHLMIAPVDPYIEAFAASGADVITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTPV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E ++D +D++ +MTVNPGFGGQ I S I K+ + +++IG R I +E+DGGVT
Sbjct: 126 ETVEYLLDMVDLVCLMTVNPGFGGQSFIHSQIEKVAKLRSMIGDRPIHIEIDGGVTPVTA 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
+ AGAD+LV GS+ F + G +S
Sbjct: 186 PLVAAAGADVLVAGSAVF-KGGSVS 209
>gi|254436914|ref|ZP_05050408.1| ribulose-phosphate 3-epimerase [Octadecabacter antarcticus 307]
gi|198252360|gb|EDY76674.1| ribulose-phosphate 3-epimerase [Octadecabacter antarcticus 307]
Length = 276
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 136/198 (68%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ LG EI I GA IH D MDG FVPN++ G +V+ ++R + +
Sbjct: 53 SIKIAPSILSADFANLGAEIQAIEAQGADWIHVDPMDGHFVPNLTIGPNVVAAIRPHVTT 112
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMIS D +I A AG D+IT H E+ PH+ RSL+++ A GK GVA+N TP+
Sbjct: 113 FMDVHLMISPADPYIGAFAKAGSDMITVHAEAGPHLHRSLQSVRAEGKMAGVALNMTTPL 172
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ D++D+IDMILIMT+NPGFGGQ+ + I K+ + +A+IG R I ++VDGG+ S
Sbjct: 173 DHVVDILDDIDMILIMTINPGFGGQKFTHAMIDKVARCRAMIGDRPIHIQVDGGIDSTTA 232
Query: 184 KSLVQAGADLLVVGSSFF 201
+ +AGA++LV GS+ F
Sbjct: 233 PLVAKAGANVLVAGSAVF 250
>gi|167855979|ref|ZP_02478726.1| predicted transporter [Haemophilus parasuis 29755]
gi|167852916|gb|EDS24183.1| predicted transporter [Haemophilus parasuis 29755]
Length = 224
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+AD +RLG++++ + KAGA IHFDVMD +VPN++FG + ++LR Y +
Sbjct: 8 IAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHYVPNLTFGPAICKALRDYGITCPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM +D I A AG DIITFHPE++ HI RSL+ I G K+G+ NP TP++
Sbjct: 68 DVHLMAKPVDRLIPDFAKAGADIITFHPEATEHIDRSLQLIREHGCKSGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ + ST+ K+R+A+ I +I LEVDGGV NI
Sbjct: 128 LDYVMDKVDVILLMSVNPGFGGQAFLPSTLNKLREARRRIDASGFNIRLEVDGGVKVNNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +AGAD+ V GS+ F+Q
Sbjct: 188 AEIAEAGADMFVAGSAIFDQ 207
>gi|209965634|ref|YP_002298549.1| ribulose-phosphate 3-epimerase [Rhodospirillum centenum SW]
gi|209959100|gb|ACI99736.1| ribulose-phosphate 3-epimerase [Rhodospirillum centenum SW]
Length = 223
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 151/215 (70%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGEE+ + AGA IH DVMDG FVPNI+ G ++++LR +S V
Sbjct: 6 VRIAPSILSADFARLGEEVRAVDAAGADYIHVDVMDGHFVPNITLGPGIVKALRPHSAKV 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ +D ++ A+AG DII+FHPE+ PH R+++ I ++GK+ G+ +NP TPVA
Sbjct: 66 FDVHLMIAPVDPYVVAFAEAGADIISFHPEAGPHPHRTVQLIRSLGKRPGIVLNPHTPVA 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+++ ++D++D++L+M+VNPGFGGQ I S + KI + I R++ LEVDGG+
Sbjct: 126 MVDYLLDDVDLVLVMSVNPGFGGQSFIASQLRKIADLRRRIDASGRTVDLEVDGGINVTT 185
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ V+AGAD+LV G++ F Q G +Y + L+
Sbjct: 186 ARQAVEAGADVLVAGTATF-QGGPAAYGANIRRLR 219
>gi|171060569|ref|YP_001792918.1| ribulose-phosphate 3-epimerase [Leptothrix cholodnii SP-6]
gi|170778014|gb|ACB36153.1| Ribulose-phosphate 3-epimerase [Leptothrix cholodnii SP-6]
Length = 228
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 139/208 (66%), Gaps = 8/208 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS- 61
P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++L+ +S
Sbjct: 4 PTYRIAPSILSADFARLGEEVRNVLAAGADWIHFDVMDNHYVPNLTFGPMVCQALKKHSV 63
Query: 62 --DSV---FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
D + D HLM+ +D A AG D+++FHPE+S H+ R+L+ I G + G+
Sbjct: 64 KPDGIACPIDVHLMVQPVDELALAFAKAGADLVSFHPEASAHVDRTLQLIKGAGCQAGLV 123
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEV 174
NP + + +LE VID +D+ILIM+VNPGFGGQ I+S + KI +A+ LI R I LEV
Sbjct: 124 FNPASSLDVLEYVIDRVDLILIMSVNPGFGGQSFIDSALRKIERARRLIEATGRDIRLEV 183
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFN 202
DGGV NI+ + AGAD V GS+ FN
Sbjct: 184 DGGVKVDNIRRIADAGADTFVAGSAIFN 211
>gi|227824646|ref|ZP_03989478.1| ribulose-phosphate 3-epimerase [Acidaminococcus sp. D21]
gi|226905145|gb|EEH91063.1| ribulose-phosphate 3-epimerase [Acidaminococcus sp. D21]
Length = 213
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 140/210 (66%), Gaps = 5/210 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL++DFS L +E + I AGA +H DVMDG FVPN++FGA V++ LR +D FD
Sbjct: 4 VAPSILSSDFSCLADETARIKAAGADWVHIDVMDGRFVPNLTFGAPVVKCLRKKTDMFFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLM+ +++++ A AG D+I H E++ H+ R L IH G K GVA+NP +P+ ++
Sbjct: 64 CHLMVEQPENYVDAFAAAGADMIVIHTEATKHLHRVLEAIHGKGIKAGVALNPASPLCLV 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
E+V+ DM+LIM+VNPGFGGQ+ IE++I KI + K I G +EVDGG+ K
Sbjct: 124 EEVLPYADMVLIMSVNPGFGGQKFIETSIDKIHRLKERIKQGGYKTLIEVDGGINKETGK 183
Query: 185 SLVQAGADLLVVGSSFF---NQKGEISYAK 211
++ +AGAD+LV GS F + K ISY +
Sbjct: 184 AVREAGADVLVAGSYIFGSPDMKKAISYLR 213
>gi|323448034|gb|EGB03938.1| hypothetical protein AURANDRAFT_69979 [Aureococcus anophagefferens]
Length = 276
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 47 IAPSILSADFARLGEEVVNSLSAGADVVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPI 106
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D + ADAG ITFHPE+SPH+ R+L+ I G K G+ NP TP+ I
Sbjct: 107 DVHLMVSPVDRIVGDFADAGASYITFHPEASPHVDRTLQLIRGAGCKAGLVFNPATPLDI 166
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I +T+ K R+A+ LI I LE+DGGV+ NI
Sbjct: 167 LKYVMDKVDIILLMSVNPGFGGQSFIPATLDKAREARKLIDASGYDIRLEIDGGVSGANI 226
Query: 184 KSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLK 217
K + +AG D+ V GS+ F + + E Y ++ ++
Sbjct: 227 KEVAEAGVDMFVAGSAIFRDPRTEEDYKVTIDAMR 261
>gi|295132790|ref|YP_003583466.1| ribulose-phosphate 3-epimerase [Zunongwangia profunda SM-A87]
gi|294980805|gb|ADF51270.1| ribulose-phosphate 3-epimerase [Zunongwangia profunda SM-A87]
Length = 220
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 140/215 (65%), Gaps = 2/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L +I + K+ A+ H D+MDG FVPNISFG V++++ ++ D
Sbjct: 6 IAPSLLAADFANLQRDIETVNKSQAQWFHVDIMDGVFVPNISFGMPVLQAINKHAKKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I AD G + +T H E+ PH+ R+L+ I A G K GVAINP T V +L
Sbjct: 66 VHLMIVDPDRYIKEFADLGANHLTVHYEACPHLHRTLQAIKAEGMKAGVAINPHTNVDLL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+DVI +ID++L+M+VNPGFGGQ IE T K+++ K +I ++ +E+DGGVT++N
Sbjct: 126 KDVIKDIDIVLVMSVNPGFGGQSFIEHTYHKVQRLKEMILNQNAETLIEIDGGVTNKNAL 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L+ AGAD+LV GS F + ++ K L L S
Sbjct: 186 ELINAGADILVAGSYVFKAENQLETIKELKHLANS 220
>gi|260774705|ref|ZP_05883609.1| ribulose-phosphate 3-epimerase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609361|gb|EEX35512.1| ribulose-phosphate 3-epimerase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 223
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADMARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D+IDMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEYIMDKIDMILLMSVNPGFGGQSFIPKTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FNQ
Sbjct: 186 REIAEAGADMFVAGSAIFNQ 205
>gi|182419307|ref|ZP_02950560.1| ribulose-phosphate 3-epimerase [Clostridium butyricum 5521]
gi|237668991|ref|ZP_04528975.1| ribulose-phosphate 3-epimerase [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182376947|gb|EDT74518.1| ribulose-phosphate 3-epimerase [Clostridium butyricum 5521]
gi|237657339|gb|EEP54895.1| ribulose-phosphate 3-epimerase [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 226
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 145/205 (70%), Gaps = 4/205 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LG E+ I +AGA +H DVMDG +VP+IS G VI+S+R Y++ +
Sbjct: 12 IKIAPSILSADFSKLGSELEIIDRAGADYVHIDVMDGLYVPSISLGFPVIKSIRKYTEMI 71
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + D +I A +G DIIT H E+S HI R+++ I GK+ VAINP T +
Sbjct: 72 FDVHLMVQNPDKYIEEAALSGADIITVHAEASTHIHRTIQKIKECGKRACVAINPGTNID 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E +++++DMIL+MTVNPGFGGQ+ IE+ KI + + + +R +I +EVDGG+ N
Sbjct: 132 VVEYILEDLDMILLMTVNPGFGGQEYIETMTNKISRLRKKLNERNLNIDVEVDGGIKLSN 191
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEI 207
+S++ AGA++LV GS F KG I
Sbjct: 192 AESVINAGANVLVSGSGIF--KGNI 214
>gi|225377862|ref|ZP_03755083.1| hypothetical protein ROSEINA2194_03521 [Roseburia inulinivorans DSM
16841]
gi|225210300|gb|EEG92654.1| hypothetical protein ROSEINA2194_03521 [Roseburia inulinivorans DSM
16841]
Length = 232
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 148/214 (69%), Gaps = 5/214 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADF+ LGE++ + +AGA+ +H DVMDG FVP+ISFG VI+S+R SD +FD H
Sbjct: 21 PSILSADFANLGEQVRMLDEAGAQYVHIDVMDGMFVPSISFGMPVIKSIRECSDRIFDVH 80
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I+ +A+ G D+IT H E+ H+ R++ I G GVA+NP TP++ +E
Sbjct: 81 LMIEEPGRYIDDLAEVGADLITVHAEACKHLDRTIEAIKEKGLLAGVALNPATPLSAIEW 140
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSL 186
++ ++DM+LIM+VNPGFGGQ+LI T+ K+R K +I ++ I +EVDGGV N+ +
Sbjct: 141 ILPKVDMVLIMSVNPGFGGQKLIPYTVEKVRALKKMIDEKGLKIDIEVDGGVNLENVTEV 200
Query: 187 VQAGADLLVVGSSFFNQKGEISY-AKRLNDLKKS 219
+ AGA+++V GS+ F KG+IS +R D+ K
Sbjct: 201 MDAGANIIVAGSAVF--KGDISENVERFLDVLKE 232
>gi|85704806|ref|ZP_01035907.1| Pentose-5-phosphate-3-epimerase [Roseovarius sp. 217]
gi|85670624|gb|EAQ25484.1| Pentose-5-phosphate-3-epimerase [Roseovarius sp. 217]
Length = 233
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 135/198 (68%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G EI I G +H DVMDG FVPN++FG + ++R + +
Sbjct: 6 SIKIAPSILSADFANFGAEIRAIEAEGCDWVHVDVMDGHFVPNLTFGPPLCAAIRPHIKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS +D +I+ A AG DI+T H E+ PHI R+L+ I G K G+A+NP T +
Sbjct: 66 VMDVHLMISPVDPYIDAFAQAGADILTAHLEAGPHIHRTLQAIRGAGCKAGLALNPGTGI 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ ++D +D+I +MTVNPGFGGQ+ I S I K+++ +A+IG R I +E+DGG+T+
Sbjct: 126 DAVDHLLDMVDLICVMTVNPGFGGQKFIHSQIDKVKRLRAMIGDRPIHIEIDGGITTETA 185
Query: 184 KSLVQAGADLLVVGSSFF 201
+ AGAD+LV GS+ F
Sbjct: 186 PLMAAAGADVLVAGSAVF 203
>gi|323447374|gb|EGB03298.1| Ribulose-phosphate 3-epimerase [Aureococcus anophagefferens]
Length = 241
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 12 IAPSILSADFARLGEEVVNSLSAGADVVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPI 71
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D + ADAG ITFHPE+SPH+ R+L+ I G K G+ NP TP+ I
Sbjct: 72 DVHLMVSPVDRIVGDFADAGASYITFHPEASPHVDRTLQLIRGAGCKAGLVFNPATPLDI 131
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I +T+ K R+A+ LI I LE+DGGV+ NI
Sbjct: 132 LKYVMDKVDIILLMSVNPGFGGQSFIPATLDKAREARKLIDASGYDIRLEIDGGVSGANI 191
Query: 184 KSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLK 217
K + +AG D+ V GS+ F + + E Y ++ ++
Sbjct: 192 KEVAEAGVDMFVAGSAIFRDPRTEEDYKVTIDAMR 226
>gi|311696177|gb|ADP99050.1| ribulose-phosphate 3-epimerase-like protein [marine bacterium HP15]
Length = 228
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNPYL-IAPSILSADFARLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCEALRKH 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I + DAG ITFHPE++ HI RSL+ I G + G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDDLIRMFIDAGASYITFHPEATNHIDRSLQLIRDGGCQAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ ++ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ I +I LE+DGG
Sbjct: 120 ATPLHYMDHVMDKLDMVLMMSVNPGFGGQKFIPGTLDKLREARKRIDASNYNIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V + NI+ + +AGAD V GS+ FN
Sbjct: 180 VKTENIREIAEAGADTFVAGSAIFN 204
>gi|328472352|gb|EGF43222.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus 10329]
Length = 223
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP+A
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASDHVDRTLQLIKEHGCKAGVVLNPATPLAH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F+Q
Sbjct: 186 REIAEAGADMFVAGSAIFSQ 205
>gi|91776822|ref|YP_546578.1| ribulose-5-phosphate 3-epimerase [Methylobacillus flagellatus KT]
gi|91710809|gb|ABE50737.1| ribulose-5-phosphate 3-epimerase [Methylobacillus flagellatus KT]
Length = 232
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 140/207 (67%), Gaps = 6/207 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+A+F++LG+EI+++ +GA +HFDVMD +VPN++ G V ++R
Sbjct: 1 MAKPFRIAPSILSANFAKLGQEITDVITSGADIVHFDVMDNHYVPNLTIGPLVCEAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D++ D HLM+ +D I A AG +IITFHPE+S HI RSL I G K+G+ NP
Sbjct: 61 TDAIIDVHLMVKPVDRIIPDFAKAGANIITFHPEASDHIDRSLSLIRDNGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP++ L+ V+D+IDM+L+M+VNPGFGGQ+ I T+ K+R+A+A I R I LE+
Sbjct: 121 TPLSYLDYVMDKIDMVLLMSVNPGFGGQKFIPGTLDKLREARARIDAYTEKTGREIWLEI 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFF 201
DGGV NI + +AGAD V GS+ F
Sbjct: 181 DGGVNPSNIAEIARAGADTFVAGSAVF 207
>gi|254303676|ref|ZP_04971034.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323868|gb|EDK89118.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 215
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 144/220 (65%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTNGIKIAPSILSSDFSKLGEEVIAIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K G+++NP
Sbjct: 61 TKLVFDVHLMIDKPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGISLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RADIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ Y +R++ LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----DYKERIDLLKLKA 214
>gi|85860497|ref|YP_462699.1| ribulose-phosphate 3-epimerase [Syntrophus aciditrophicus SB]
gi|85723588|gb|ABC78531.1| ribulose-phosphate 3-epimerase [Syntrophus aciditrophicus SB]
Length = 228
Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 146/198 (73%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+EI+ + AGA IH DVMDG FVPN++ G V++SLR + F
Sbjct: 3 KIAPSILSADFSRLGDEIAAVEAAGADWIHIDVMDGHFVPNLTIGPPVVKSLRKVTRLPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + DS+++ DAGCDI+T H E++ H+ R++ I G GV++NP TP+++
Sbjct: 63 DVHLMIDNPDSYLDAFIDAGCDILTVHAEAAVHLHRTISYIRERGVSAGVSVNPATPLSL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
LED++ ++D++LIMTVNPGFGGQQ I + +PKIR+AKA+I S I +EVDGG+ NI
Sbjct: 123 LEDILPDLDLLLIMTVNPGFGGQQFIPTMLPKIRKAKAMISAVSPRIVIEVDGGINLDNI 182
Query: 184 KSLVQAGADLLVVGSSFF 201
++ QAGAD+LV GS+ F
Sbjct: 183 STVAQAGADVLVAGSAVF 200
>gi|262393104|ref|YP_003284958.1| ribulose-phosphate 3-epimerase [Vibrio sp. Ex25]
gi|262336698|gb|ACY50493.1| ribulose-phosphate 3-epimerase [Vibrio sp. Ex25]
Length = 223
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+A
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASDHVDRTLQLIKEHGCQAGVVLNPATPLAS 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEFIMDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|295687551|ref|YP_003591244.1| ribulose-phosphate 3-epimerase [Caulobacter segnis ATCC 21756]
gi|295429454|gb|ADG08626.1| ribulose-phosphate 3-epimerase [Caulobacter segnis ATCC 21756]
Length = 219
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 138/213 (64%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DF+RLGEE++ I AGA +H DVMDG FVPNI+ G D+++++R ++ FD
Sbjct: 6 IAPSILASDFARLGEEVAAIEAAGADWVHVDVMDGHFVPNITLGPDIVKAIRPHAKIPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D ++ AG DII+ HPE+ PH+ RSL+ I +G K GV NP T + +
Sbjct: 66 VHLMISPADPYLEAFRAAGADIISIHPEAGPHLHRSLKRIRELGAKAGVVFNPSTSIDHV 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E +++++D++L+M+VNPGFGGQ I + K+ + +I K I LEVDGGVT
Sbjct: 126 EWILEDVDLLLVMSVNPGFGGQSFIPGQLRKVEALRKMIDKAGLDILLEVDGGVTPVTAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V AGA LV GS+ F + G +YA + LK
Sbjct: 186 QCVAAGATALVAGSAVF-KGGREAYAANIRALK 217
>gi|237749110|ref|ZP_04579590.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes OXCC13]
gi|229380472|gb|EEO30563.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes OXCC13]
Length = 226
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 5/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ LG E+ N+ KAGA IHFDVMD +VPN++ G V ++R + D
Sbjct: 5 RIAPSILSADFAELGNEVRNVVKAGADMIHFDVMDNHYVPNLTMGPMVCAAIRPHVDVPI 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +II+FHPE+S HI R+L+ IH G K G+ NP TP+
Sbjct: 65 DVHLMVKPVDRIIPDFAKAGANIISFHPEASEHIDRTLQLIHDNGCKAGLVFNPATPLDY 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L V+D++D+ILIM+VNPGFGGQ I + KI +A+I R I LEVDGGV NI
Sbjct: 125 LLHVMDKLDLILIMSVNPGFGGQSFIPHALKKIETVRAMIDSSGRQIMLEVDGGVKVDNI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD V GS+ F+Q YA+ + ++++
Sbjct: 185 AEIAAAGADTFVAGSAIFSQP---DYARVIREMREQ 217
>gi|319775513|ref|YP_004138001.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae F3047]
gi|319897918|ref|YP_004136115.1| d-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae F3031]
gi|329122445|ref|ZP_08251032.1| ribulose-phosphate 3-epimerase [Haemophilus aegyptius ATCC 11116]
gi|317433424|emb|CBY81805.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae F3031]
gi|317450104|emb|CBY86318.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae F3047]
gi|327473727|gb|EGF19146.1| ribulose-phosphate 3-epimerase [Haemophilus aegyptius ATCC 11116]
Length = 224
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 151/225 (67%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG+ V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGSAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDY-KQVIDQMRTQLA 220
>gi|160947225|ref|ZP_02094392.1| hypothetical protein PEPMIC_01158 [Parvimonas micra ATCC 33270]
gi|158446359|gb|EDP23354.1| hypothetical protein PEPMIC_01158 [Parvimonas micra ATCC 33270]
Length = 219
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 141/202 (69%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF+ L E+ + K G K +H DVMDG FVPNISFG +I+ LR ++ +
Sbjct: 2 LELSPSLLSADFTNLKSEMEVLGKNGVKYLHLDVMDGMFVPNISFGPMIIKQLRPLTNMI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D ++ DAG DI+T H E+ H+ R++ I ++G K GV++NP T +
Sbjct: 62 FDVHLMIEDPDRYVQNFKDAGADILTVHYEACKHLHRTVSYIKSLGMKAGVSLNPATNID 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+ V++++D++LIM+VNPGFGGQ I S I KI+ KA I +R+++ +EVDGGV + N
Sbjct: 122 VLDYVLEDLDLVLIMSVNPGFGGQSFIPSAIDKIKNLKAKIRERNLNVIVEVDGGVKTTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+K +++AGADL+V GS F K
Sbjct: 182 VKDVIEAGADLIVSGSDVFADK 203
>gi|295696047|ref|YP_003589285.1| ribulose-phosphate 3-epimerase [Bacillus tusciae DSM 2912]
gi|295411649|gb|ADG06141.1| ribulose-phosphate 3-epimerase [Bacillus tusciae DSM 2912]
Length = 221
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 143/220 (65%), Gaps = 4/220 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PSIL+ADF+RL EE+ ++T+AGA IH DVMDG FVPNI+ G V+ SLR
Sbjct: 1 MRRSVMMAPSILSADFARLAEEVESVTRAGANWIHVDVMDGQFVPNITIGPPVVASLRRV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLMI++ D +I A AG D IT H E+ PH+ R++++I A G K GVA+NP
Sbjct: 61 TDLPLDVHLMIANPDRYIEDFARAGADRITVHVEACPHLHRTIQSIRATGAKPGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVT 179
TP ++ V+++++++L+MTVNPGFGGQ + T+ KI + G R + +EVDGG+
Sbjct: 121 TPPEMVRWVLEDVELVLVMTVNPGFGGQAFLPRTVEKIPLLREWAGDRDDLYVEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V+AGAD+LV GS+ F G K L D+ ++
Sbjct: 181 PSTAPKAVKAGADVLVAGSAVF---GRADRKKALGDILEA 217
>gi|145628948|ref|ZP_01784748.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 22.1-21]
gi|144979418|gb|EDJ89104.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 22.1-21]
Length = 224
Score = 201 bits (511), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 150/225 (66%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GISAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDY-KQVIDQMRTQLA 220
>gi|149191614|ref|ZP_01869859.1| ribulose-phosphate 3-epimerase [Vibrio shilonii AK1]
gi|148834572|gb|EDL51564.1| ribulose-phosphate 3-epimerase [Vibrio shilonii AK1]
Length = 225
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 140/200 (70%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G + GV +NP TP++
Sbjct: 66 DVHLMVKPVDSIVPDFAKAGASMITFHVEASEHVDRTLQLIKEHGCQAGVVLNPATPLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I ST+ K+R+ + I R+I LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFIPSTLDKLREVRKRIDASGRNIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FN+
Sbjct: 186 REIAEAGADMFVAGSAIFNR 205
>gi|71282136|ref|YP_267237.1| ribulose-phosphate 3-epimerase [Colwellia psychrerythraea 34H]
gi|71147876|gb|AAZ28349.1| ribulose-phosphate 3-epimerase [Colwellia psychrerythraea 34H]
Length = 224
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 144/206 (69%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P + I PSIL+A+F+RLG++++ + AGA +HFDVMD FVPN++FG + +SLR Y
Sbjct: 1 MSPFL-IAPSILSANFARLGDDVAKVLAAGADVVHFDVMDNHFVPNLTFGPMICKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ++D+ I A+AG DIITFHPE+S HI RSL+ I G K G+ +NP
Sbjct: 60 GITAPIDVHLMVKNVDTLIPGFAEAGADIITFHPEASDHIDRSLQLIKDNGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+R K I + I L+VDGG
Sbjct: 120 ATPLHCLDFVMDKLDVILLMSVNPGFGGQSFIPTTLDKLRLVKEKIKQSGYDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V + NI + AGAD+ V GS+ F+Q
Sbjct: 180 VKANNIAEIADAGADMFVAGSAIFSQ 205
>gi|125973095|ref|YP_001037005.1| ribulose-5-phosphate 3-epimerase [Clostridium thermocellum ATCC
27405]
gi|256004598|ref|ZP_05429576.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum DSM 2360]
gi|281417290|ref|ZP_06248310.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum JW20]
gi|125713320|gb|ABN51812.1| ribulose-5-phosphate 3-epimerase [Clostridium thermocellum ATCC
27405]
gi|255991470|gb|EEU01574.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum DSM 2360]
gi|281408692|gb|EFB38950.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum JW20]
gi|316940684|gb|ADU74718.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum DSM 1313]
Length = 220
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 146/218 (66%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEE+ I KAGA +H DVMDG FVPNI+ G V++SL+ S
Sbjct: 3 IKIAPSILSADFSKLGEEVLRIEKAGADLVHIDVMDGHFVPNITIGPPVVKSLKKVSKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I ADAG DII+ H E+ H+ R+++ I +G K VA+NP TP+
Sbjct: 63 FDVHLMIENPDMYIESFADAGADIISVHAEACRHLHRTIQKIKQLGIKAAVALNPATPLC 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+E V++++DMIL+MTVNPGFGGQ+ I KI + + ++ R +I +EVDGG+ +
Sbjct: 123 AVEWVMEDVDMILLMTVNPGFGGQKYINGVTRKIEELERIVESRGLNIDIEVDGGIDTET 182
Query: 183 IKSLVQAGADLLVVGSSFF--NQKGEISYAKRLNDLKK 218
++ + +AGA+++V GS+ F +I R+N +K
Sbjct: 183 VQYVTKAGANVIVSGSTIFAAEDTAKIIQELRMNSYRK 220
>gi|225418649|ref|ZP_03761838.1| hypothetical protein CLOSTASPAR_05873 [Clostridium asparagiforme
DSM 15981]
gi|225041820|gb|EEG52066.1| hypothetical protein CLOSTASPAR_05873 [Clostridium asparagiforme
DSM 15981]
Length = 220
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 134/198 (67%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF +L E+ + + GA+ +H DVMDG FVP+ISFG VI SLR Y+D VFD
Sbjct: 4 LAPSVLAADFGKLAEDTAKAREGGARYLHLDVMDGAFVPSISFGMPVIASLRGYTDLVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ ++ I AG DIIT H E+ H+ R + I A G K GVA+NP TPV+ L
Sbjct: 64 VHMMVEDPGRYVESIRKAGADIITVHQEACTHLDRVIGQIKASGAKAGVALNPATPVSTL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E V+D++DM+L+M+VNPGFGGQ+ I T+ K+R + + +S ++VDGGV I+
Sbjct: 124 ECVLDQVDMVLVMSVNPGFGGQKFIPYTLDKVRALRQYFDGKGLSTDIQVDGGVNRDTIR 183
Query: 185 SLVQAGADLLVVGSSFFN 202
L++AGA++LV GS+ F
Sbjct: 184 PLIEAGANVLVAGSAVFG 201
>gi|119385299|ref|YP_916355.1| ribulose-phosphate 3-epimerase [Paracoccus denitrificans PD1222]
gi|119375066|gb|ABL70659.1| ribulose-5-phosphate 3-epimerase [Paracoccus denitrificans PD1222]
Length = 244
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G+E + GA +H DVMDG FVPN++FG + +++R + V
Sbjct: 21 IKIAPSILSADFANFGQECRAVEDQGADWVHVDVMDGHFVPNLTFGPAMCKAIRPHIRGV 80
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I A+AG DIIT H E+ PH+ R+L+ I G + G+A+NP TP
Sbjct: 81 MDVHLMIAPVDPYIEAFAEAGSDIITAHVEAGPHVHRTLQAIRGAGARAGLALNPGTPAD 140
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++D++D+I +MTVNPGFGGQ+ I S I K+R+ +A+IG R + +E+DGGV
Sbjct: 141 AARPLLDDVDLICVMTVNPGFGGQKFIHSQIEKVRELRAMIGDRPVHIEIDGGVDPTTAP 200
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
+ AGAD+LV GS+ F + G +S
Sbjct: 201 LVAAAGADVLVAGSAVF-RGGSVS 223
>gi|332529257|ref|ZP_08405220.1| ribulose-phosphate 3-epimerase [Hylemonella gracilis ATCC 19624]
gi|332041267|gb|EGI77630.1| ribulose-phosphate 3-epimerase [Hylemonella gracilis ATCC 19624]
Length = 235
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 149/228 (65%), Gaps = 12/228 (5%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PSIL+ADF+RLG+E+ N+ AGA IHFDVMD +VPN++FG + ++L+ ++
Sbjct: 12 PAYRIAPSILSADFARLGDELKNVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPHAK 71
Query: 63 SV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
D H+M+ +D+ A++G D+I+FHP++SPH+ RS++ I A G K G+
Sbjct: 72 RADGTPVPLDVHMMVQPVDALAAAFAESGADLISFHPDASPHVHRSIQAIKAKGVKAGLT 131
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEV 174
NP P+ +L+ VI++ID+ILIM+VNPGFGGQ I+S + KI A+ I + I LEV
Sbjct: 132 FNPAAPLDVLDWVIEDIDLILIMSVNPGFGGQSFIDSALRKIEAARKRIEACGKDIRLEV 191
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGG+ NI+ + AGAD V GS+ F G+ Y K + D + ALA
Sbjct: 192 DGGIKVDNIRRVADAGADTFVAGSAIF---GKPDY-KAVVDAMRRALA 235
>gi|312882790|ref|ZP_07742524.1| ribulose-phosphate 3-epimerase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369574|gb|EFP97092.1| ribulose-phosphate 3-epimerase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 223
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE++ + AGA IHFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADMARLGEDVEKVLSAGADVIHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMAKPVDRLIPDFAKAGASMITFHIEASEHVDRTLQLIKECGCKAGVVLNPATPLSS 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D +D+IL+M+VNPGFGGQ I ST+ K+R + LI + R+I LEVDGGV NI
Sbjct: 126 LEYIMDRLDLILLMSVNPGFGGQSFIPSTLDKLRSVRRLIEQSGRNIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K + +AGAD+ V GS+ F+Q
Sbjct: 186 KEIAEAGADMFVAGSAIFDQ 205
>gi|251793625|ref|YP_003008355.1| ribulose-phosphate 3-epimerase [Aggregatibacter aphrophilus NJ8700]
gi|247535022|gb|ACS98268.1| ribulose-phosphate 3-epimerase [Aggregatibacter aphrophilus NJ8700]
Length = 224
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 150/226 (66%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ N+ K G IHFDVMD +VPN++FG V ++LR+Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVENVLKCGGDVIHFDVMDNHYVPNLTFGPAVCKALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPE+S HI R+L+ + G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPEASEHIDRTLQLLRDNGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++Q + I + I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKVDVILLMSVNPGFGGQSFIPATLDKLKQVRKRIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + +AGAD+ V GS+ F+Q Y K ++++++ A+
Sbjct: 180 VKVSNIAEIARAGADMFVAGSAIFDQP---DYKKVIDEMRQQLAAV 222
>gi|148827758|ref|YP_001292511.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittGG]
gi|148719000|gb|ABR00128.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittGG]
Length = 224
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 141/207 (68%), Gaps = 4/207 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK 204
V NI + AGAD+ V GS+ F ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKQ 206
>gi|118340552|gb|ABK80602.1| putative ribulose-phosphate 3-epimerase [uncultured marine
Nitrospinaceae bacterium]
Length = 221
Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILA+DFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R ++ D
Sbjct: 10 VAPSILASDFSRLGDEVKAVEHAGADWIHIDVMDGHFVPNITIGPSVVEAIRKVTELPLD 69
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D++I AG DIIT H E+ PH+ R+++ I GV +NP TP++ L
Sbjct: 70 VHLMIENADNYIGEFISAGSDIITVHVEACPHLNRTIQLIKDQDIMAGVVLNPATPLSSL 129
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
E+++ EID++L+M+VNPGFGGQ+ I S + KI+ + + I+LEVDGG+TS N
Sbjct: 130 EEILHEIDIVLLMSVNPGFGGQKFIPSMLDKIQNLSEITSHYENPIALEVDGGITSENAG 189
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+VQAGA +LV GS+ FN K Y K + L++S
Sbjct: 190 DIVQAGASVLVAGSAVFNSK---DYKKAIYSLRQS 221
>gi|302386498|ref|YP_003822320.1| ribulose-phosphate 3-epimerase [Clostridium saccharolyticum WM1]
gi|302197126|gb|ADL04697.1| ribulose-phosphate 3-epimerase [Clostridium saccharolyticum WM1]
Length = 220
Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 141/200 (70%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSILAADF LG+++ ++ +AGA+ IH DVMDG FVP+ISFG VI SLRS +D +
Sbjct: 2 LKLAPSILAADFKILGQQVVDVAEAGAQYIHLDVMDGAFVPSISFGMPVIGSLRSCTDRI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ +IN + +AG D+I H E+ H+ R++ I G K GVA+NP T ++
Sbjct: 62 FDVHMMVEEPGRYINDMKEAGADLICVHAEACTHLDRTMNQIKEAGLKAGVALNPATSLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+ ++ E+DM+LIM+VNPGFGGQ+ I T+ K+R + + +R + ++VDGGVT N
Sbjct: 122 VLDQILPELDMVLIMSVNPGFGGQKFIPYTLEKVRALRRICIERHLETDIQVDGGVTCDN 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
++ L++AGA++ V GS+ F
Sbjct: 182 VRELIEAGANVFVAGSAVFK 201
>gi|88704587|ref|ZP_01102300.1| Ribulose-phosphate 3-epimerase [Congregibacter litoralis KT71]
gi|88700908|gb|EAQ98014.1| Ribulose-phosphate 3-epimerase [Congregibacter litoralis KT71]
Length = 224
Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 145/219 (66%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ ++ AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 8 IAPSILSADFARLGEEVDSVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRKHGVTAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I ADAG ITFHP++S H+ RSL+ I G K G+ +NP +
Sbjct: 68 DVHLMVSPVDQLIGDFADAGASFITFHPDASTHVDRSLQMIRDAGCKAGLVLNPHVGLDD 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L V+D++DMIL+M+VNPGFGGQ I ST+ K+R+A+ALI +I LEVDGGVT NI
Sbjct: 128 LTYVMDKLDMILLMSVNPGFGGQSFIPSTLTKLREARALIDASGLNIRLEVDGGVTPTNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGAD V GS+ F Q YA + ++ +SALA
Sbjct: 188 AEIAAAGADTFVAGSAIFGQD---DYAAVIAEM-RSALA 222
>gi|212639610|ref|YP_002316130.1| pentose-5-phosphate-3-epimerase [Anoxybacillus flavithermus WK1]
gi|212561090|gb|ACJ34145.1| Pentose-5-phosphate-3-epimerase [Anoxybacillus flavithermus WK1]
Length = 218
Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 138/201 (68%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F++LGEEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSANFAKLGEEIIDVERGGADYIHVDVMDGHFVPNITIGPLIVEAIRPVTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG D +T H E+ PH+ R++ I G K GVA+NP TP++
Sbjct: 62 LDVHLMIEQPDRYIPTFAKAGADYLTVHVEACPHLHRTIHLIKEHGVKAGVALNPHTPIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E VI+++D++L MTVNPGFGGQ I + +PKI +L+ +R S+ +EVDGG+ +
Sbjct: 122 MIEHVIEDLDLVLFMTVNPGFGGQSFIPAVLPKIHAFSSLVRERGVSVEIEVDGGIHAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
K V+AGA++LV GS+ +NQ
Sbjct: 182 AKLCVEAGANVLVAGSAIYNQ 202
>gi|145637926|ref|ZP_01793568.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittHH]
gi|145268866|gb|EDK08827.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittHH]
Length = 224
Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 150/225 (66%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVNNIAEIAAAGADMFVAGSAIF---GKPDY-KQVIDQMRTQLA 220
>gi|27364780|ref|NP_760308.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus CMCP6]
gi|37681169|ref|NP_935778.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus YJ016]
gi|320155174|ref|YP_004187553.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus MO6-24/O]
gi|27360925|gb|AAO09835.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus CMCP6]
gi|37199920|dbj|BAC95749.1| pentose-5-phosphate-3-epimerase [Vibrio vulnificus YJ016]
gi|319930486|gb|ADV85350.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus MO6-24/O]
Length = 222
Score = 201 bits (510), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP+A
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPATPLAH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I R I LE+DGGV NI
Sbjct: 126 LEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDATGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|291280493|ref|YP_003497328.1| ribulose-phosphate 3-epimerase [Deferribacter desulfuricans SSM1]
gi|290755195|dbj|BAI81572.1| ribulose-phosphate 3-epimerase [Deferribacter desulfuricans SSM1]
Length = 212
Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 142/213 (66%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRLGEEI + KAGA IH DVMDG FVPNI+ G V++S+R + FD
Sbjct: 3 IAPSILSADFSRLGEEIKLVEKAGADWIHIDVMDGRFVPNITIGPVVVKSIRKVTKLPFD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I AG DIIT H E++ H+ R + I +G K GV+INP T ++ +
Sbjct: 63 AHLMIVEPEKYIEDFVKAGADIITVHVEATNHLHRLVENIKMLGAKAGVSINPATSLSTI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+++ +DMIL+M+VNPGFGGQ+ IE+++ KI++ K +I + I +EVDGGV N K
Sbjct: 123 EEILPFVDMILVMSVNPGFGGQKFIETSLQKIKRLKEMIKNIGKDILIEVDGGVNDSNAK 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AG D+LV GS F G +Y ++++ LK
Sbjct: 183 LLRDAGCDVLVAGSYIF---GSDNYKEKIDSLK 212
>gi|326794315|ref|YP_004312135.1| ribulose-phosphate 3-epimerase [Marinomonas mediterranea MMB-1]
gi|326545079|gb|ADZ90299.1| ribulose-phosphate 3-epimerase [Marinomonas mediterranea MMB-1]
Length = 224
Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSILAADF+RLGEE+ N+ +AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILAADFARLGEEVDNVLEAGADMIHFDVMDNHYVPNLTIGPMVCKALRKHGVTADI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I +AG +ITFHP+ S HI RSL+ I G K+G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIGDFIEAGASMITFHPQGSEHIDRSLQMIREGGCKSGLVFNPATPLSE 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++DM+L+M+VNPGFGGQ+ I +T K+++A+ LI + I LE+DGGV+ +NI
Sbjct: 126 LQYVMDKVDMVLLMSVNPGFGGQKFIPATFDKLKEARKLIDESGYDIRLEIDGGVSEKNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +AGAD V GS+ F +
Sbjct: 186 AEVARAGADTFVAGSAIFGK 205
>gi|256821377|ref|YP_003145340.1| ribulose-phosphate 3-epimerase [Kangiella koreensis DSM 16069]
gi|256794916|gb|ACV25572.1| ribulose-phosphate 3-epimerase [Kangiella koreensis DSM 16069]
Length = 225
Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 144/219 (65%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I I PSIL+ADF+RLGEE+ N+ KAGA +HFDVMD +VPN++ G V +LR++ +
Sbjct: 4 IVIAPSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYVPNLTIGPMVCEALRNHGIKA 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG ITFHPE+S H+ R++ I G K G+ +NP TP+
Sbjct: 64 PIDVHLMVEPVDRIIPDFAKAGASYITFHPEASKHVDRTIGLIKEQGCKAGIVLNPATPL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
++L+ VI+++DM+L+M+VNPGFGGQ I T+ K +Q + LI +R I LE+DGGV
Sbjct: 124 SVLDYVIEKLDMVLLMSVNPGFGGQSFIPHTLQKCQQVRRLIDERGLDIRLEIDGGVKVD 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI+ + GAD V GS+ FN Y K ++ +K++A
Sbjct: 184 NIEEIAACGADTFVAGSAVFNAD---DYGKVIHTMKENA 219
>gi|160893335|ref|ZP_02074122.1| hypothetical protein CLOL250_00884 [Clostridium sp. L2-50]
gi|156865027|gb|EDO58458.1| hypothetical protein CLOL250_00884 [Clostridium sp. L2-50]
Length = 219
Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 140/199 (70%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L E+I I +AG++ IH DVMDG FVPNISFGA VI+S+R SD V
Sbjct: 2 LKLSPSVLSADFGHLAEDIQIIDQAGSEYIHLDVMDGSFVPNISFGAPVIKSVRPVSDKV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + G DI+T H E+ H+ R++ I +G K GVA+NP TP++
Sbjct: 62 FDVHLMIDEPTRFLQDYKNCGADIVTVHAEACKHLHRTIAAIKELGMKAGVALNPATPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+++ V++++DM+LIM+VNPGFGGQ+ I S++ KI + + L+ R + ++VDGGVT N
Sbjct: 122 VIDYVLEDVDMVLIMSVNPGFGGQKFIPSSLRKIAETRKLLNSRGLQTDIQVDGGVTLAN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
+++AGA++LV GS+ F
Sbjct: 182 AAEIIRAGANVLVAGSAVF 200
>gi|295399769|ref|ZP_06809750.1| ribulose-phosphate 3-epimerase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978172|gb|EFG53769.1| ribulose-phosphate 3-epimerase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 216
Score = 201 bits (510), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 139/202 (68%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F++L EEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSANFAQLAEEIRDVERGGADYIHVDVMDGHFVPNITIGPLIVEAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I + A AG D ++ H E+ PH+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPVFAKAGADYLSVHVEACPHLHRTVHLIKEHGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ +ID+ID++L+MTVNPGFGGQ+ I S +PKIRQ L+ + R + +EVDGG+ +
Sbjct: 122 MIQHMIDDIDLVLLMTVNPGFGGQKFIPSVLPKIRQVAQLVKEKGRFVEIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA++LV GS+ +N++
Sbjct: 182 ARFCIEAGANVLVAGSAIYNER 203
>gi|145631755|ref|ZP_01787516.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae R3021]
gi|145635347|ref|ZP_01791049.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittAA]
gi|144982616|gb|EDJ90162.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae R3021]
gi|145267353|gb|EDK07355.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittAA]
Length = 224
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 151/225 (67%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ +Y K++ D ++ LA
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPNY-KQVIDQMRTQLA 220
>gi|152995088|ref|YP_001339923.1| ribulose-phosphate 3-epimerase [Marinomonas sp. MWYL1]
gi|150836012|gb|ABR69988.1| Ribulose-phosphate 3-epimerase [Marinomonas sp. MWYL1]
Length = 223
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 145/216 (67%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ N+ +AGA IHFDVMD +VPN++ G V ++LR++ +
Sbjct: 6 IAPSILSADFARLGEEVDNVLEAGADIIHFDVMDNHYVPNLTIGPMVCKALRNHGVTANI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I +AG IITFHPE+S HI RSL+ I G K G+ NP T +
Sbjct: 66 DVHLMVKPVDRMIGDFIEAGASIITFHPEASEHIDRSLQMIRDGGCKAGLVFNPATSLEH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+IDM+L+M+VNPGFGGQ I T+ K+R+A+ALI +I LEVDGGV+ +NI
Sbjct: 126 LKYVMDKIDMVLLMSVNPGFGGQSFIPGTLDKLREARALIDASGYNIRLEVDGGVSEKNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGAD V GS+ F G+ Y ++ ++K
Sbjct: 186 AEIARAGADTFVAGSAIF---GKDDYKSVIDAMRKE 218
>gi|260582730|ref|ZP_05850517.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae NT127]
gi|260094180|gb|EEW78081.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae NT127]
Length = 234
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 148/220 (67%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 11 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 70 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 130 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ +Y + ++ ++
Sbjct: 190 VKVDNIAEIAAAGADMFVAGSAIF---GKPNYKQVIDQIR 226
>gi|117618311|ref|YP_857676.1| ribulose-phosphate 3-epimerase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559718|gb|ABK36666.1| ribulose-phosphate 3-epimerase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 270
Score = 200 bits (509), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 145/219 (66%), Gaps = 13/219 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG++++ + AGA +HFDVMD +VPN++ G V ++LR Y ++
Sbjct: 52 IAPSILSADFARLGDDVAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYGIEAPI 111
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFHPE+S H+ RSL I G + G+ +NP TP+
Sbjct: 112 DVHLMVKPVDRIIPDFAKAGASLITFHPEASDHVDRSLGLIKEQGCQAGLVLNPATPLTC 171
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + R I LE+DGGV NI
Sbjct: 172 LEYVMDKLDVILLMSVNPGFGGQSFIPGTLDKLRQVRRLIDESGRDIRLEIDGGVKVDNI 231
Query: 184 KSLVQAGADLLVVGSSFFNQ----------KGEISYAKR 212
+ + QAGAD+ V GS+ F++ + E+S+ KR
Sbjct: 232 REIAQAGADMFVAGSAIFSRPDYKAVIDEMRAELSHVKR 270
>gi|329894601|ref|ZP_08270407.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC3088]
gi|328922955|gb|EGG30283.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC3088]
Length = 222
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEEVDAVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D+ I ADAG ITFHP++S H+ RSL I A G K G+ +NP
Sbjct: 66 DVHLMVSPVDALITQFADAGASYITFHPDASTHVDRSLSAIRAAGCKAGLVLNPHVSPEC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++DM+L+M+VNPGFGGQ+ I ST+ K + + LI + I LE+DGGVT+ NI
Sbjct: 126 LKYVMDKVDMVLLMSVNPGFGGQKFIPSTLEKCAEVRRLIDESGYDIRLEIDGGVTADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +AGAD+ V GS+ FN+
Sbjct: 186 ADIARAGADMFVAGSAIFNK 205
>gi|313673238|ref|YP_004051349.1| ribulose-5-phosphate 3-epimerase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939994|gb|ADR19186.1| ribulose-5-phosphate 3-epimerase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 213
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 145/209 (69%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFS+LG+E+ +I ++GA IH DVMDG FVPNI+ G VI ++RS + FD
Sbjct: 3 VAPSILSADFSKLGQEVIDIDRSGADWIHIDVMDGLFVPNITIGPLVIEAIRSKTTKPFD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + +I+ A AG DIIT H ES+ H+ R + I G+K GV+INP TPV +L
Sbjct: 63 VHLMIVNPEKYIDQFATAGSDIITVHYESTVHLHRVIHQIKDTGRKAGVSINPSTPVIML 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++++ +D++LIM+VNPGFGGQ+ IES+I KI++ K +I ++ +EVDGGV+ +NI+
Sbjct: 123 DEILPYLDLVLIMSVNPGFGGQKFIESSISKIKKLKEMIVSANLQTLIEVDGGVSDKNIR 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
L AG D++V G+ F S ++L
Sbjct: 183 LLKDAGCDVVVAGNYIFKSNDYESAIRKL 211
>gi|260890514|ref|ZP_05901777.1| hypothetical protein GCWU000323_01692 [Leptotrichia hofstadii
F0254]
gi|260859756|gb|EEX74256.1| ribulose-phosphate 3-epimerase [Leptotrichia hofstadii F0254]
Length = 212
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 145/211 (68%), Gaps = 7/211 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADFS+L EEI+ + K GA+ +H DVMDG FVPNISFGA VI SLR +S+ VFD
Sbjct: 9 IAPSLLAADFSKLKEEITEVEKLGAEYLHLDVMDGNFVPNISFGAPVISSLRKHSNLVFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ D I A DIIT H E++ H+ R+++ I + GKK GVA+NP TP+ ++
Sbjct: 69 VHLMVNEPDYLIEDFAQF-SDIITVHAEAAKHLNRTIQLIKSFGKKVGVALNPSTPLDVI 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ +D IDM+LIMTVNPGFGGQ+ I + KI+ + + ++I +EVDGG+ + K +
Sbjct: 128 KYDLDNIDMVLIMTVNPGFGGQKFIPEMLQKIKDLRKI--NQNIDIEVDGGINAETGKLV 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+AGA++LV GS F+ +Y +++ LK
Sbjct: 186 KEAGANVLVAGSYIFSG----NYKEKIESLK 212
>gi|262273419|ref|ZP_06051233.1| ribulose-phosphate 3-epimerase [Grimontia hollisae CIP 101886]
gi|262222397|gb|EEY73708.1| ribulose-phosphate 3-epimerase [Grimontia hollisae CIP 101886]
Length = 224
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S HI RSL+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHAEASEHIDRSLQLIKEHGCKAGLVFNPATPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I T+ K+R+ + I + R I LE+DGGV NI
Sbjct: 126 LDHVMDKLDMILLMSVNPGFGGQSFIPETLNKLREVRRRIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|308048050|ref|YP_003911616.1| ribulose-5-phosphate 3-epimerase [Ferrimonas balearica DSM 9799]
gi|307630240|gb|ADN74542.1| ribulose-5-phosphate 3-epimerase [Ferrimonas balearica DSM 9799]
Length = 224
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 146/216 (67%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE++N+ AGA +HFDVMD +VPN++ G V ++LR+Y ++
Sbjct: 6 IAPSILSADFARLGEEVANVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRNYGIEAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG IITFHPE+S H+ R+L+ I + G + G+ +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASIITFHPEASEHVDRTLQLIKSEGCQAGLVLNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ KIRQ + I R+I LE+DGGV + NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPHTLDKIRQVRERIDASGRNIRLEIDGGVKADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+ V GS+ F G+ Y ++ +++
Sbjct: 186 AEIAAAGADMFVAGSAIF---GKPDYKAEIDKMREQ 218
>gi|226940126|ref|YP_002795199.1| Rpe [Laribacter hongkongensis HLHK9]
gi|226715052|gb|ACO74190.1| Rpe [Laribacter hongkongensis HLHK9]
Length = 226
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 138/206 (66%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++R ++ +
Sbjct: 3 NFRIAPSILSADFARLGEEVRDVVAAGADIIHFDVMDNHYVPNLTIGPMVCEAIRPHTSA 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +DS I + A AG ++ITFHPE+S HI RSL I G K G+ NP T +
Sbjct: 63 PIDVHLMVKPVDSLIPMFAKAGANLITFHPEASEHIDRSLGLIKEHGCKAGLVFNPATSL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEVDGG 177
+ L+ V+D+IDMILIM+VNPGFGGQ I + KIR A+ I + I LEVDGG
Sbjct: 123 SYLDHVMDKIDMILIMSVNPGFGGQSFIPEALNKIRAARQRIDAWTAVHGGEIWLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI+++ +AGAD V GS+ + Q
Sbjct: 183 IKAGNIRAVAEAGADTFVAGSAIYGQ 208
>gi|145633478|ref|ZP_01789207.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 3655]
gi|229846656|ref|ZP_04466764.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 7P49H1]
gi|144985847|gb|EDJ92455.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 3655]
gi|229810749|gb|EEP46467.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 7P49H1]
Length = 224
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 147/220 (66%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y + ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKQVIDQIR 216
>gi|254488272|ref|ZP_05101477.1| ribulose-phosphate 3-epimerase [Roseobacter sp. GAI101]
gi|214045141|gb|EEB85779.1| ribulose-phosphate 3-epimerase [Roseobacter sp. GAI101]
Length = 229
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 143/221 (64%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSILAADF+ G E + + GA +H DVMDG FVPNISFG ++R +
Sbjct: 6 SIKIAPSILAADFANFGAECAAVEAQGADWVHVDVMDGHFVPNISFGPTTCAAIRPHIKG 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ D HLMI+ +D +I+ A AG D IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 66 IMDVHLMIAPVDPYIDAFAQAGADFITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTPA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +E ++D D++ +MTVNPGFGGQ+ I+ T KI+ +A+IG R + +E+DGGV
Sbjct: 126 SAVEHLLDITDLVCVMTVNPGFGGQKFIDMT-DKIKTLRAMIGDRPVHIEIDGGVDVNTA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLKKSA 220
++ +AGAD+LV GS+ F + G ++ Y + ++++A
Sbjct: 185 PTVAKAGADVLVAGSAVF-RGGSVTNPGPYGDNIRAIREAA 224
>gi|305664520|ref|YP_003860807.1| ribulose-phosphate 3-epimerase [Maribacter sp. HTCC2170]
gi|88708537|gb|EAR00773.1| ribulose-phosphate 3-epimerase [Maribacter sp. HTCC2170]
Length = 219
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LAADF L ++ + + A H D+MDG FVPNIS+G V+++++ +++
Sbjct: 5 KIAPSLLAADFGNLQRDVEMVNNSEADWHHIDIMDGVFVPNISYGMPVLKAIQKHANKPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D +I AD G +++ H E+ H+ RSL+ I A G K GVAINP T + +
Sbjct: 65 DVHLMIVDPDRYIKTFADLGASVLSVHYEACNHLHRSLQAIKAEGMKAGVAINPHTSINL 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE+ I++ID++ +M+VNPGFGGQ IE+T K++ KALI K+ + +E+DGGVTS+N
Sbjct: 125 LEETINDIDVVCLMSVNPGFGGQSFIENTYEKVKALKALINKKGANTLIEIDGGVTSKNA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
KSLV+AGAD+LV GS F K L ++
Sbjct: 185 KSLVEAGADVLVAGSFVFKSDNPTETIKELKEI 217
>gi|301169282|emb|CBW28879.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae 10810]
Length = 224
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 150/225 (66%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDY-KQVIDQMRTQLA 220
>gi|254429468|ref|ZP_05043175.1| ribulose-phosphate 3-epimerase [Alcanivorax sp. DG881]
gi|196195637|gb|EDX90596.1| ribulose-phosphate 3-epimerase [Alcanivorax sp. DG881]
Length = 224
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSILAA+F+RLGEE + AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 8 IAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I++ A+AG ITFHPE+S H+ RSL+ I + G K G+ +NP T
Sbjct: 68 DVHLMVSPVDDLISMFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLNPATRPDC 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
LE V+D++DMIL+M+VNPG+GGQ+ I ST+ K R + LI R I LEVDGGV+ +NI
Sbjct: 128 LEYVMDKLDMILLMSVNPGYGGQKFIPSTLDKTRAVRQLIDASGRDIRLEVDGGVSEKNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + AGAD V GS+ F + + +++ D
Sbjct: 188 REVAAAGADTFVAGSAIFGKDDYAAVIQQMRD 219
>gi|148825155|ref|YP_001289908.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittEE]
gi|148715315|gb|ABQ97525.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittEE]
Length = 224
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 150/225 (66%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDY-KQVIDQMRTQLA 220
>gi|156972404|ref|YP_001443311.1| ribulose-phosphate 3-epimerase [Vibrio harveyi ATCC BAA-1116]
gi|156523998|gb|ABU69084.1| hypothetical protein VIBHAR_00024 [Vibrio harveyi ATCC BAA-1116]
Length = 223
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP+A
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPATPLAH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F++
Sbjct: 186 REIAEAGADMFVAGSAIFSE 205
>gi|311068100|ref|YP_003973023.1| ribulose-phosphate 3-epimerase [Bacillus atrophaeus 1942]
gi|310868617|gb|ADP32092.1| ribulose-phosphate 3-epimerase [Bacillus atrophaeus 1942]
Length = 216
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 143/218 (65%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LG+EI ++ + GA IH DVMDG FVPNI+ G ++ ++R ++
Sbjct: 2 IKVAPSILSADFASLGKEIKDVEQGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTELP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG D+I+ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADVISVHAEACPHLHRTIQLIKEHGVKAGVVLNPHTPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+++ VI+E+D++L+MTVNPGFGGQ+ I S +PKI + + L GK I +EVDGGV
Sbjct: 122 MIKHVIEELDLVLLMTVNPGFGGQKFIHSVLPKISEVRRLADVKGKNEILIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++AGA+LLV GS+ + Q K ++D++ S
Sbjct: 182 TAPLCIEAGANLLVAGSAIYGQN---DRKKAISDIRGS 216
>gi|145640540|ref|ZP_01796124.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae R3021]
gi|145275126|gb|EDK14988.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 22.4-21]
Length = 224
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 149/225 (66%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLELIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDY-KQVIDQMRTQLA 220
>gi|134093490|ref|YP_001098565.1| ribulose-phosphate 3-epimerase [Herminiimonas arsenicoxydans]
gi|133737393|emb|CAL60436.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Herminiimonas arsenicoxydans]
Length = 221
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 135/203 (66%), Gaps = 2/203 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PS +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 2 PSYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHVQ 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D + A AG +IITFHPE+S H+ R+L+ I G K G+ NP TP
Sbjct: 62 VPIDVHLMVKPVDRIVPDFAKAGANIITFHPEASEHVDRTLQLIRDNGCKAGLVFNPATP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ LE V+D++D+IL+M+VNPGFGGQ I T+ KI + LI + R I LEVDGG+
Sbjct: 122 LHYLEHVMDKLDIILLMSVNPGFGGQSFIPHTLKKIAAVRKLIDESGRDIMLEVDGGIKV 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
NI++ +AGAD V GS+ F +
Sbjct: 182 DNIEAAARAGADTFVAGSAIFGK 204
>gi|221133682|ref|ZP_03559987.1| Ribulose-phosphate 3-epimerase [Glaciecola sp. HTCC2999]
Length = 222
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 150/219 (68%), Gaps = 6/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
S I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN+SFGA + ++LR Y
Sbjct: 3 SFLIAPSILSADFARLGEEVETVLAAGADVVHFDVMDNHYVPNLSFGAPICKALRDYGIT 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM++ +DS I AG +I+FHPE+S H+ RSL+ I G + G+ +NP TP
Sbjct: 63 APIDVHLMVTPVDSMIEQFVTAGASMISFHPEASDHVDRSLQLIIEGGCQAGLVLNPATP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+++LE I ++D IL+M+VNPGFGGQ+ IE T+ KI + KAL+ R I +EVDGG+
Sbjct: 123 LSVLEHTIHKLDYILLMSVNPGFGGQKFIEHTLTKIAKVKALVDASGRDIRIEVDGGINC 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI ++ AGAD+ V GS+ FNQ +YA+ ++ ++++
Sbjct: 183 DNIAAIAAAGADMFVAGSAIFNQP---NYAEVISTIRRN 218
>gi|68249166|ref|YP_248278.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 86-028NP]
gi|68057365|gb|AAX87618.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 86-028NP]
Length = 234
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 147/220 (66%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 11 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 70 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 130 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y + ++ ++
Sbjct: 190 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKQVIDQIR 226
>gi|145638525|ref|ZP_01794134.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittII]
gi|145272120|gb|EDK12028.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittII]
gi|309750029|gb|ADO80013.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae R2866]
Length = 224
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 149/225 (66%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG ++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGNDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDY-KQVIDQMRTQLA 220
>gi|294783161|ref|ZP_06748485.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 1_1_41FAA]
gi|294480039|gb|EFG27816.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 1_1_41FAA]
Length = 215
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 144/220 (65%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA IH DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTKGIKIAPSILSSDFSKLGEELVAIDKAGADYIHIDVMDGEFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDRPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TSEDVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RADIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ Y +R++ LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----DYKERIDLLKSKA 214
>gi|91762550|ref|ZP_01264515.1| Ribulose-phosphate 3-epimerase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718352|gb|EAS85002.1| Ribulose-phosphate 3-epimerase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 219
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 153/219 (69%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL+ADFS+L EI + + GA IH DVMDG FVPN++ G +I+SLR ++
Sbjct: 4 IQISPSILSADFSQLRNEIKRLEEGGADMIHVDVMDGHFVPNLTMGPPIIKSLRKFTKLP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS + +I ADAG DIIT HPE++ ++ S+ I ++GKK GV++NPE+ +
Sbjct: 64 FDVHLMISPVHKYIKDYADAGADIITIHPEATENLAVSINHIKSLGKKVGVSLNPESKIN 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ D++++ID++LIM+VNPGFGGQ+ + + KI++ K + +++I +E+DGG+ N
Sbjct: 124 LITDLLNQIDLVLIMSVNPGFGGQKFMPEVLEKIKELKKIRDQKNIDFDIEIDGGINFDN 183
Query: 183 IKSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLKKSA 220
K ++AGA++LV G++ F N G+I K+ DL KS+
Sbjct: 184 NKLAIEAGANILVSGTTIFKNNNGDI---KKNIDLLKSS 219
>gi|87119762|ref|ZP_01075659.1| ribulose-phosphate 3-epimerase [Marinomonas sp. MED121]
gi|86165238|gb|EAQ66506.1| ribulose-phosphate 3-epimerase [Marinomonas sp. MED121]
Length = 224
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSILAADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILAADFARLGEEVDSVLNAGADIIHFDVMDNHYVPNLTIGPMVCKALRDYGVTAEI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I AG ITFHPE++ HI RSL+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDGMIEEFLKAGASYITFHPEATEHIDRSLQMIKDAGCKAGLVFNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
++ V+D++DMI++M+VNPGFGGQ+ I +T+ K+R+A+ALI +I LEVDGGV+ +NI
Sbjct: 126 MKHVMDKLDMIMLMSVNPGFGGQKFIPATLDKLREARALIDSSGYNIRLEVDGGVSEKNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD V GS+ F +
Sbjct: 186 AEIAVAGADTFVAGSAIFGK 205
>gi|153003321|ref|YP_001377646.1| ribulose-phosphate 3-epimerase [Anaeromyxobacter sp. Fw109-5]
gi|152026894|gb|ABS24662.1| Ribulose-phosphate 3-epimerase [Anaeromyxobacter sp. Fw109-5]
Length = 230
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 135/202 (66%), Gaps = 2/202 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I+I PSIL+ADF RL EE+ I AGA +H DVMDG FVPNI+ G V+ ++R +
Sbjct: 4 PPIRIAPSILSADFGRLAEEVRAIEAAGADVVHVDVMDGRFVPNITIGPLVVEAVRKVTK 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG D+++ H E+SPH+ R+L+ I A G + VA+NP TP
Sbjct: 64 LPIDVHLMIVEPERYVEAFAKAGADLLSVHAEASPHLHRTLQAIRAAGARPAVALNPSTP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTS 180
++ +E VI+E +M+L+MTVNPGFGGQ+ IE+ K+RQ +AL R S+ +EVDGGV +
Sbjct: 124 LSAVEWVIEECEMVLVMTVNPGFGGQRYIEACTDKLRQLRALADARNPSLEIEVDGGVNA 183
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
+ AGA+LLV G++ F
Sbjct: 184 ERAGLVAGAGANLLVAGTAVFG 205
>gi|149182350|ref|ZP_01860828.1| ribulose-phosphate 3-epimerase [Bacillus sp. SG-1]
gi|148849969|gb|EDL64141.1| ribulose-phosphate 3-epimerase [Bacillus sp. SG-1]
Length = 218
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 138/202 (68%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +EI ++ GA IH DVMDG FVPNI+ G +++++R +D
Sbjct: 2 VKIAPSILSADFANLAKEIKDVESGGADYIHVDVMDGHFVPNITLGPMIVKAVRPITDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A+AG D IT H E++PH+ R+++ I + G K G +NP TPV
Sbjct: 62 LDVHLMIENPDQYIEAFAEAGSDYITVHAEATPHLHRTIQLIKSRGIKAGAVLNPGTPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ VI+++DM+L+MTVNPGFGGQ I+S +PKIR+ L + S+ +EVDGG+T+
Sbjct: 122 MIKHVIEDLDMVLLMTVNPGFGGQSFIQSVVPKIREVHELAQQFNPSMEIEVDGGITAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
K AGA + V GS+ +N++
Sbjct: 182 AKVCADAGATVFVAGSAIYNKE 203
>gi|332878132|ref|ZP_08445861.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332683870|gb|EGJ56738.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 215
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 132/196 (67%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+LAADF L + + + + A H D+MDG FVPNIS+G V+ ++ ++ D H
Sbjct: 5 PSLLAADFGNLQQAVQMVNASEADWFHIDIMDGVFVPNISYGIPVLSAINKHATKPLDVH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI D +I+ A G I+T H E+ H+ R+L+ I A G K GVA+NP TPV +LED
Sbjct: 65 LMIIDPDRYISTFAKLGSHILTVHYEACTHLHRTLQAIKAEGMKAGVALNPHTPVTLLED 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
+I ++D++L+M+VNPGFGGQ IE+T K+RQAKALI + + +E+DGGVT N K+L
Sbjct: 125 IIKDVDLLLLMSVNPGFGGQSFIENTYKKVRQAKALITQAGANTLIEIDGGVTLSNAKAL 184
Query: 187 VQAGADLLVVGSSFFN 202
V+AGAD LV GS FN
Sbjct: 185 VEAGADALVAGSFVFN 200
>gi|145347492|ref|XP_001418198.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578427|gb|ABO96491.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 265
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 145/220 (65%), Gaps = 7/220 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI + PSIL+A+F++LGEEI I KAGA+ +H DVMDG FVPNI+ G V+ ++R +D
Sbjct: 44 SIIVSPSILSANFAKLGEEIQAIDKAGAEWVHVDVMDGRFVPNITIGPLVVDAIRPVTDK 103
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPET 121
V DCHLMI + + A AG DII+ H E + H+ R++ I +G K GV +NP T
Sbjct: 104 VLDCHLMIVEPELRVADFAKAGADIISVHAEGAATIHLHRTINQIKDLGCKAGVVLNPGT 163
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV +LE +I+E+D+IL+M+VNPGFGGQ IES + KI Q K + + ++ +EVDGGV+
Sbjct: 164 PVNVLEYIIEEVDLILVMSVNPGFGGQSFIESQVEKIAQIKKMCVAKGVNPWIEVDGGVS 223
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ FN YA + +K S
Sbjct: 224 PANAYKVIEAGANALVAGSAVFNSP---DYAAAIAGIKAS 260
>gi|298209057|ref|YP_003717236.1| ribulose-phosphate 3-epimerase [Croceibacter atlanticus HTCC2559]
gi|83848984|gb|EAP86853.1| ribulose-phosphate 3-epimerase [Croceibacter atlanticus HTCC2559]
Length = 219
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 140/214 (65%), Gaps = 5/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAADF+ L +I + + A H D+MDG FVPNISFG V++++ +++
Sbjct: 5 RIAPSILAADFANLQRDIELVNNSDADWFHIDIMDGVFVPNISFGMPVLKAINKHANKTI 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D +I A+ G +++T H E+ H+ R+L+ I A G K GVAINP TPV +
Sbjct: 65 DVHLMIVDPDRYIKTFAELGSNVLTVHYEACTHLHRTLQAIKAEGMKAGVAINPHTPVDL 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED+I++ID++ IM+VNPGFGGQ IE+T K+ + K +I + +E+DGGVT++N
Sbjct: 125 LEDIINDIDVVCIMSVNPGFGGQSFIENTYKKVTRLKEIILNNNAETLIEIDGGVTNKNA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K LV AGAD+LV GS F G K + DLK
Sbjct: 185 KELVNAGADVLVAGSYVF---GSSDPLKTIKDLK 215
>gi|171060426|ref|YP_001792775.1| ribulose-phosphate 3-epimerase [Leptothrix cholodnii SP-6]
gi|170777871|gb|ACB36010.1| Ribulose-phosphate 3-epimerase [Leptothrix cholodnii SP-6]
Length = 225
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 137/206 (66%), Gaps = 8/206 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS---- 61
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++L+ +S
Sbjct: 4 RIAPSILSADFARLGEEVRNVLAAGADWIHFDVMDNHYVPNLTFGPMVCQALKKHSVKPD 63
Query: 62 --DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +D A AG D+I+FHPE+S H+ R+L+ I G + G+A NP
Sbjct: 64 GRACPIDVHLMVQPVDELALAFAKAGADLISFHPEASAHVDRTLQLIKGAGCQAGLAFNP 123
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
+ + +LE VID +D+ILIM+VNPGFGGQ I+S + KI +A+ LI R I LEVDGG
Sbjct: 124 ASSLDVLEYVIDRVDLILIMSVNPGFGGQSFIDSALRKIERARRLIEATGRDIRLEVDGG 183
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + AGAD V GS+ F+Q
Sbjct: 184 VKVDNIRRIADAGADTFVAGSAIFSQ 209
>gi|326335969|ref|ZP_08202146.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691933|gb|EGD33895.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 215
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 132/198 (66%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L +I + ++ A H DVMDG FVPNIS+G V++++ Y+ D
Sbjct: 3 IAPSLLAADFANLQRDIEMVNRSQADWFHIDVMDGVFVPNISYGMPVVKAIHKYAQKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +++ A G ++ H E+ H+ R+L+ I G K GVA+NP TP+++L
Sbjct: 63 VHLMIIDPDRYLHAFAQLGSTTLSVHYEACVHLHRTLQAIKQEGMKAGVALNPHTPISVL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I E+D++LIM+VNPGFGGQ IE+T K+RQAK LI + +EVDGGV + N
Sbjct: 123 EDIITEVDLLLIMSVNPGFGGQSFIENTYKKVRQAKELILRNHAKTLIEVDGGVNATNAP 182
Query: 185 SLVQAGADLLVVGSSFFN 202
LV+AGAD+LV GS FN
Sbjct: 183 ELVKAGADVLVAGSFVFN 200
>gi|160939805|ref|ZP_02087152.1| hypothetical protein CLOBOL_04696 [Clostridium bolteae ATCC
BAA-613]
gi|158437239|gb|EDP15004.1| hypothetical protein CLOBOL_04696 [Clostridium bolteae ATCC
BAA-613]
Length = 221
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 139/200 (69%), Gaps = 2/200 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSILAADF+RLGE++ + AGA+ +H DVMDG FVP+ISFG VI+SLR + +VF
Sbjct: 4 KLAPSILAADFTRLGEQVKEVYGAGAEYLHLDVMDGAFVPSISFGMPVIKSLRPCTRAVF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ ++ + + G DIIT E+ H+ R + I G K GVA+NP TPV
Sbjct: 64 DVHMMVEEPGRYVEDMKNCGADIITVQAEACTHLDRVVNQIKEAGLKAGVALNPATPVRS 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE ++ ++DM+LIMTVNPGFGGQ+ I T+ K+R+ K ++ ++ + ++VDGGV + N+
Sbjct: 124 LECILGQLDMVLIMTVNPGFGGQKFIPYTLDKVRELKNMLNEQGLKTDIQVDGGVNAGNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +++AGA++ V GS+ F +
Sbjct: 184 REIIEAGANIFVAGSAVFGR 203
>gi|319942232|ref|ZP_08016548.1| hypothetical protein HMPREF9464_01767 [Sutterella wadsworthensis
3_1_45B]
gi|319804285|gb|EFW01177.1| hypothetical protein HMPREF9464_01767 [Sutterella wadsworthensis
3_1_45B]
Length = 229
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 146/227 (64%), Gaps = 9/227 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V++++R Y
Sbjct: 3 TCRIAPSILSADFARLGEEVRDVAAAGADWIHFDVMDNHYVPNLTVGPLVLKAIRPYVSI 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +D+ + +AG DIITFH E++ H+ R+L+ I G K G+ NP TP+
Sbjct: 63 PIDVHLMIEPVDALVPSFIEAGADIITFHCEATKHVDRTLQLIRKGGVKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA-------KALIGKRSISLEVDG 176
L+ +D+ID++L+M+VNPGFGGQ IESTI K+ + KA G R I+LEVDG
Sbjct: 123 DYLDYELDQIDVVLLMSVNPGFGGQSFIESTIEKLARVREKLDAYKAQTG-REIALEVDG 181
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
GV NI + AGAD V GS+ F YA+ + + KSA+A+
Sbjct: 182 GVKPANIARIAAAGADTFVAGSAVFGAGSAQGYAEVIRSM-KSAVAV 227
>gi|329117081|ref|ZP_08245798.1| ribulose-phosphate 3-epimerase [Streptococcus parauberis NCFD 2020]
gi|326907486|gb|EGE54400.1| ribulose-phosphate 3-epimerase [Streptococcus parauberis NCFD 2020]
Length = 220
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 132/201 (65%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+LAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 SYKIAPSVLAADYANFASELKRIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + + +++ A AG DI+T H ES+ HI +L+ I A G K GV INP TPV
Sbjct: 63 VFDCHLMVVNPERYVDAYAQAGADIMTIHTESTSHIHGALQKIKAAGMKAGVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+ LE V+ +D +LIMTVNPGFGGQ I + K+++ L G S +EVDGGV +
Sbjct: 123 SALEPVLPLVDQVLIMTVNPGFGGQSFIPECLDKVKKVVDLRQAGGYSFDIEVDGGVDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I + QAGA++ V GS F
Sbjct: 183 TIAACAQAGANVFVAGSYLFK 203
>gi|268592442|ref|ZP_06126663.1| ribulose-phosphate 3-epimerase [Providencia rettgeri DSM 1131]
gi|291312232|gb|EFE52685.1| ribulose-phosphate 3-epimerase [Providencia rettgeri DSM 1131]
Length = 224
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTANVLAAGADIVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG I+FHPE+S H+ RSL+ I G G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGATHISFHPEASEHVDRSLQLIREHGCTAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I T+ K+RQ + LI + I LEVDGGV NI
Sbjct: 126 LDYVMDKVDMILLMSVNPGFGGQSFIPQTLNKLRQVRKLIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD V GS+ F+Q
Sbjct: 186 AEIAAAGADTFVAGSAIFDQ 205
>gi|169831738|ref|YP_001717720.1| ribulose-phosphate 3-epimerase [Candidatus Desulforudis audaxviator
MP104C]
gi|169638582|gb|ACA60088.1| Ribulose-phosphate 3-epimerase [Candidatus Desulforudis audaxviator
MP104C]
Length = 219
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 139/212 (65%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF RL EEI + +AGA +H DVMDG FVPNIS G V+ SLR S V
Sbjct: 2 IKIAPSILSADFGRLAEEIRKVEEAGADYLHIDVMDGHFVPNISIGPPVVASLRPQSSLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + ++ A+AG DI+T H E++ H+ R+LR I G + GVA+NP TP
Sbjct: 62 FDVHLMIEAPERYVAAFAEAGADILTVHFEAARHLDRTLRLIREHGMRAGVALNPATPPG 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + +PKI + ++ ++ + LEVDGG+
Sbjct: 122 MVEYVLPLVDQVLVMTVNPGFGGQKFLPEVVPKIAGLRRMVERQGVGTDLEVDGGIDPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++V+AGA++LV GS+ + + +RL
Sbjct: 182 APAVVRAGANVLVAGSAVYGAADAAAMVQRLR 213
>gi|312111721|ref|YP_003990037.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y4.1MC1]
gi|311216822|gb|ADP75426.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y4.1MC1]
Length = 216
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 138/202 (68%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F++L EEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSANFAQLAEEIRDVERGGADYIHVDVMDGHFVPNITIGPLIVEAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I + A AG D ++ H E+ PH+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPVFAKAGADYLSVHVEACPHLHRTVHLIKEHGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ +ID+ID++L+MTVNPGFGGQ+ I S +PKIRQ L+ + R + +EVDGG+ +
Sbjct: 122 MIQHMIDDIDLVLLMTVNPGFGGQKFIPSVLPKIRQVAQLVKEKGRFVEIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ ++AGA +LV GS+ +N++
Sbjct: 182 ARFCIEAGATVLVAGSAIYNER 203
>gi|86141298|ref|ZP_01059844.1| ribulose-phosphate 3-epimerase [Leeuwenhoekiella blandensis MED217]
gi|85831857|gb|EAQ50312.1| ribulose-phosphate 3-epimerase [Leeuwenhoekiella blandensis MED217]
Length = 219
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + PSILAADF+ L EI + + A +H DVMDG FVPNISFG V++++ +
Sbjct: 1 MTPK-YVAPSILAADFANLESEIKMVNSSDADWLHVDVMDGVFVPNISFGMPVVQAISKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ V D HLMI D +I A G + +T H E+ H+ R+L+ I A G K GVA+NP
Sbjct: 60 NKKVMDVHLMIVDPDRYIKTFAQLGSNNLTVHYEACTHLHRTLQAIKAEGMKAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGV 178
TPV++L+DVI++ID ++IM+VNPGFGGQ IE+T K+R+ K +I S +E+DGGV
Sbjct: 120 TPVSLLKDVINDIDQVIIMSVNPGFGGQSFIENTYKKVRELKEIILTHNASTRIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
T N + L+ GAD+LV GS F ++ + L L
Sbjct: 180 TDANAQELINCGADVLVAGSYIFKASDPVNTIENLKKL 217
>gi|121592794|ref|YP_984690.1| ribulose-5-phosphate 3-epimerase [Acidovorax sp. JS42]
gi|222109570|ref|YP_002551834.1| ribulose-phosphate 3-epimerase [Acidovorax ebreus TPSY]
gi|120604874|gb|ABM40614.1| ribulose-5-phosphate 3-epimerase [Acidovorax sp. JS42]
gi|221729014|gb|ACM31834.1| ribulose-phosphate 3-epimerase [Acidovorax ebreus TPSY]
Length = 226
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 141/211 (66%), Gaps = 8/211 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++L+ +
Sbjct: 1 MSRTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYVPNLTFGPMVCQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM+ +D A AG D+I+FHP++S H+ RS++ I A G K G
Sbjct: 61 AVTPAGHAVPIDVHLMVQPVDELATAFAKAGADLISFHPDASAHVHRSIQNIRAQGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
+ NP P+ +L+ VI++ID+IL+M+VNPGFGGQ I+ST+ KI A+ I + I L
Sbjct: 121 LTFNPAMPLDVLDWVIEDIDLILLMSVNPGFGGQSFIDSTLRKIEAARRRIEASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
EVDGG+ + NI+ + AGAD V GS+ F +
Sbjct: 181 EVDGGIKADNIRRVADAGADTFVAGSAIFGK 211
>gi|86609495|ref|YP_478257.1| ribulose-phosphate 3-epimerase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558037|gb|ABD02994.1| ribulose-phosphate 3-epimerase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 236
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 146/219 (66%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 13 IVIAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPLVVEALRPVTAKP 72
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI ++++ A AG DII+ H ESS H+ R+L I +GK+ GV +NP +P
Sbjct: 73 LDVHLMIVEPENYVADFAKAGADIISVHAESSSTIHLHRTLSQIKDLGKQAGVVLNPASP 132
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ +++ V+D +D++LIM+VNPGFGGQ I + +PKIRQ +A+ +R + +EVDGG+ +
Sbjct: 133 LELIQYVLDLVDLVLIMSVNPGFGGQSFIPAVVPKIRQLRAMCDERGLDPWIEVDGGIKA 192
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ F K YA+ + ++ S
Sbjct: 193 SNAWQVIEAGANAIVAGSAVFKAK---DYAEAIRSIRNS 228
>gi|254467871|ref|ZP_05081277.1| ribulose-phosphate 3-epimerase [beta proteobacterium KB13]
gi|207086681|gb|EDZ63964.1| ribulose-phosphate 3-epimerase [beta proteobacterium KB13]
Length = 232
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 145/224 (64%), Gaps = 7/224 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL+ADF++LG+E+S++ +GA +HFDVMD +VPN++ G V ++R
Sbjct: 1 MSKDFRIAPSILSADFAKLGQEVSDVITSGADIVHFDVMDNHYVPNLTIGPLVCEAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D++ D HLMI +D I A AG +IITFHPE+S HI RSL + G K+G+ NP
Sbjct: 61 TDAIIDVHLMIEPVDRIIPDFAKAGANIITFHPEASNHIDRSLSLVRDQGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D++DM+L+M+VNPGFGGQ+ + S + K++ A+ I R I LE+
Sbjct: 121 TPLDYLDYVMDKVDMVLLMSVNPGFGGQKFLPSALEKLKAARKKIDAYTQETGREIWLEI 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
DGGV + NI + +AGAD V GS+ F + S R N + K
Sbjct: 181 DGGVNANNIADIARAGADTFVAGSAVFGAAND-SDPNRYNTIIK 223
>gi|15603484|ref|NP_246558.1| ribulose-phosphate 3-epimerase [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12722019|gb|AAK03703.1| Dod [Pasteurella multocida subsp. multocida str. Pm70]
Length = 238
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 149/227 (65%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ + GA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 16 MKPYL-IAPSILSADLARLGEDVEQVLTCGADVIHFDVMDNHYVPNLTFGPAICQALRHY 74
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPE++ HI RSL+ I G K+G+ NP
Sbjct: 75 GITAPIDVHLMVKPVDRLIPDFAKAGANYITFHPEATEHIDRSLQLIRDCGCKSGLVFNP 134
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+R+A+ I + I LEVDGG
Sbjct: 135 ATPLSYLDYVMDKVDVILLMSVNPGFGGQSFIPSTLDKLREARQRIDESGFDIRLEVDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + +AGAD+ V GS+ F+Q Y K ++++++ ++
Sbjct: 195 VKVSNIADIARAGADMFVAGSAIFDQP---DYQKVIDEMRQQLATVE 238
>gi|226327384|ref|ZP_03802902.1| hypothetical protein PROPEN_01254 [Proteus penneri ATCC 35198]
gi|225203910|gb|EEG86264.1| hypothetical protein PROPEN_01254 [Proteus penneri ATCC 35198]
Length = 223
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++FGA + ++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG I+FH E+S H+ R+++ I G K G+ +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGATYISFHAEASDHVDRTIQLIKDCGCKAGLVLNPATPLNY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + +I G I LE+DGGV NI
Sbjct: 126 LDYVMDKLDLILLMSVNPGFGGQSFIPNTLDKLRQVRKMIDDGGYDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ QAGAD+ V GS+ FNQ
Sbjct: 186 AEIAQAGADMFVAGSAIFNQ 205
>gi|229845695|ref|ZP_04465818.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 6P18H1]
gi|229811381|gb|EEP47087.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 6P18H1]
Length = 224
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 146/220 (66%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS F G+ Y + ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSEIF---GKPDYKQVIDQIR 216
>gi|198284919|ref|YP_002221240.1| Ribulose-phosphate 3-epimerase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667831|ref|YP_002427600.1| ribulose-phosphate 3-epimerase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198249440|gb|ACH85033.1| Ribulose-phosphate 3-epimerase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520044|gb|ACK80630.1| ribulose-phosphate 3-epimerase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 220
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 145/216 (67%), Gaps = 5/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ + +AGA IH DVMD FVPN++ G V +++ ++
Sbjct: 5 KISPSILSADFARLGEEVRAVDEAGADYIHIDVMDNHFVPNLTIGPLVAAAIKPHTQKPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMIS +DS I A AG DIIT HPE++ H+ R+++ IH++G K GV++NP TP+ +
Sbjct: 65 DVHLMISPVDSIIPDFAKAGADIITVHPEATIHLDRTIQLIHSLGCKAGVSLNPSTPLDV 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V++ +D++L+M+VNPGFGGQ IE T+ KI + I ++I LEVDGGV N+
Sbjct: 125 LDYVLESLDLVLVMSVNPGFGGQSFIEYTLRKIEAIRKRIEATGKAIELEVDGGVKVDNV 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + AGAD+ V GS+ +N YA + +K+
Sbjct: 185 RRVADAGADVFVAGSAIYNTP---DYAATIAAFRKA 217
>gi|15895007|ref|NP_348356.1| ribulose-phosphate 3-epimerase [Clostridium acetobutylicum ATCC
824]
gi|15024697|gb|AAK79696.1|AE007682_6 Pentose-5-phosphate-3-epimerase, YLOR B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|325509144|gb|ADZ20780.1| ribulose-phosphate 3-epimerase [Clostridium acetobutylicum EA 2018]
Length = 216
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 140/205 (68%), Gaps = 3/205 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ SIL+ADFS+LGEE+ + +AGA IH D+MDG FVPNISFG V+R +R ++
Sbjct: 2 IKLAASILSADFSKLGEEVRTLDEAGADFIHIDIMDGNFVPNISFGIPVVRDIRKHTKLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ +G DIIT H E+ HI R+L I + G K VAINP TPV
Sbjct: 62 FDVHLMIEEPSKYVEQFVKSGADIITVHYETDRHIDRTLNYIKSFGVKAAVAINPGTPVN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++++++ DM+LIM+VNPGFGGQ+ I+ + KIR+ K + R I +EVDGGV S N
Sbjct: 122 MIKNLLTTADMVLIMSVNPGFGGQKYIDYSYDKIREVKKYADEIGRDILIEVDGGVDSTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEI 207
IK +V+AGA+++V GS+ F + G+I
Sbjct: 182 IKKVVEAGANVVVAGSAVF-KNGDI 205
>gi|257126922|ref|YP_003165036.1| ribulose-phosphate 3-epimerase [Leptotrichia buccalis C-1013-b]
gi|257050861|gb|ACV40045.1| ribulose-phosphate 3-epimerase [Leptotrichia buccalis C-1013-b]
Length = 212
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 143/211 (67%), Gaps = 7/211 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L ADFS+L EEI+ + K GA+ +H DVMDG FVPNISFGA VI SLR +S+ VFD
Sbjct: 9 IAPSLLTADFSKLKEEITEVEKLGAEYLHLDVMDGNFVPNISFGAPVISSLRKHSNLVFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ D I A DIIT H E++ H+ R+++ I + GKK GVA+NP TP+ ++
Sbjct: 69 VHLMVNEPDYLIEGFAQF-SDIITVHAEATKHLNRTIQLIKSFGKKVGVALNPSTPLDVI 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ +D IDM+LIMTVNPGFGGQ+ I + KI+ + + +I +EVDGG+ + K +
Sbjct: 128 KYDLDNIDMVLIMTVNPGFGGQKFIPEMLQKIKDLRKI--NENIDIEVDGGINAETAKLV 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+AGA++LV GS F+ +Y +++ LK
Sbjct: 186 KEAGANVLVAGSYIFSG----NYKEKIESLK 212
>gi|226946673|ref|YP_002801746.1| ribulose-phosphate 3-epimerase [Azotobacter vinelandii DJ]
gi|226721600|gb|ACO80771.1| ribulose-phosphate 3-epimerase [Azotobacter vinelandii DJ]
Length = 224
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 135/206 (65%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDRVLAAGADIVHFDVMDNHYVPNLTIGPMVCTALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG ITFHPE+S HI RSL+ I G + G+ NP
Sbjct: 60 GIQAPIDVHLMVKPVDRIIGDFLEAGASYITFHPEASEHIDRSLQLIRDGGARAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDCLKYVMDKLDMLLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V +NI + AGAD V GS+ F Q
Sbjct: 180 VNVKNIGEIAAAGADTFVAGSAIFGQ 205
>gi|294500977|ref|YP_003564677.1| ribulose-phosphate 3-epimerase [Bacillus megaterium QM B1551]
gi|294350914|gb|ADE71243.1| ribulose-phosphate 3-epimerase [Bacillus megaterium QM B1551]
Length = 218
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 136/201 (67%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+FS+L EEI + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 3 KIAPSILSANFSKLAEEIREVEAGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D ++ + A AG DI+T H E+ H+ R+++ I G K GVA+NP TP+ +
Sbjct: 63 DVHLMIENPDQYVPMFAKAGADILTVHAEACTHLHRTIQLIKEHGMKAGVALNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ ++++ID+IL+MTVNPGFGGQ I S +PKI Q LI R SI +EVDGG+
Sbjct: 123 VKHILEDIDLILLMTVNPGFGGQNFIPSVLPKIEQISQLIEIRHLSIEVEVDGGINEETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQ+
Sbjct: 183 RKCVEAGANVLVAGSAIYNQE 203
>gi|309972283|gb|ADO95484.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae R2846]
Length = 224
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 148/225 (65%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG ++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGNDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITEPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F G+ Y K++ D ++ LA
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDY-KQVIDQMRTQLA 220
>gi|319788091|ref|YP_004147566.1| ribulose-phosphate 3-epimerase [Pseudoxanthomonas suwonensis 11-1]
gi|317466603|gb|ADV28335.1| ribulose-phosphate 3-epimerase [Pseudoxanthomonas suwonensis 11-1]
Length = 228
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 150/226 (66%), Gaps = 5/226 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P++ I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTV-IAPSILSADFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 SDSVF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
F D HLM+ +D + A AG ++I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GVQAFIDVHLMVEPVDRIVPDFAAAGANLISFHPEASRHVHRTIQLIRSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV L+ V++++D++++M+VNPGFGGQ I ST+ K+R +A+I K + I LE+DGG
Sbjct: 120 ATPVEALDWVLEDLDLVMLMSVNPGFGGQAFIPSTLDKLRAVRAMIDKTGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ-KGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F + + YA + +K + A
Sbjct: 180 VKADNIGQIAAAGADTFVAGSAIFAEPRTREHYADVVGRMKAAVAA 225
>gi|71083025|ref|YP_265744.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062138|gb|AAZ21141.1| Ribulose-phosphate 3-epimerase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 219
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 153/220 (69%), Gaps = 6/220 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
IQI PSIL+ADFS+L EI + + GA IH DVMDG FVPN++ G +I+SLR ++
Sbjct: 3 KIQISPSILSADFSQLRNEIKRLEEGGADMIHVDVMDGHFVPNLTMGPPIIKSLRKFTKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMIS + +I ADAG DIIT HPE++ ++ S+ I ++GKK GV++NPE+ +
Sbjct: 63 PFDVHLMISPVHKYIKDYADAGADIITIHPEATENLAVSIDHIKSLGKKVGVSLNPESKI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ D++++ID++LIM+VNPGFGGQ+ + + KI++ K + +++I +E+DGG+
Sbjct: 123 NLITDLLNQIDLVLIMSVNPGFGGQKFMPEVLEKIKELKKIRDQKNIDFDIEIDGGINFD 182
Query: 182 NIKSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLKKSA 220
N K ++AGA++LV G++ F N G+I K+ DL KS+
Sbjct: 183 NNKLAIEAGANILVSGTTIFKNNNGDI---KKNIDLLKSS 219
>gi|302380659|ref|ZP_07269124.1| ribulose-phosphate 3-epimerase [Finegoldia magna ACS-171-V-Col3]
gi|302311602|gb|EFK93618.1| ribulose-phosphate 3-epimerase [Finegoldia magna ACS-171-V-Col3]
Length = 218
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 143/212 (67%), Gaps = 6/212 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVFDC 67
PS+LA +F L + + + G + +H DVMDG FVPNISFG +I+ +R Y + +FDC
Sbjct: 6 PSLLACNFFELEKNLDILKNKGIRYLHLDVMDGNFVPNISFGPAIIKQIREKYPEFIFDC 65
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLM++ ++ IN I DAG DIITFHPE++ H R ++T+H GKK G+A+NP T + +
Sbjct: 66 HLMVNKPENIINDILDAGADIITFHPEATFHPHRIIQTVHKAGKKCGLALNPSTGLESCK 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKS 185
+ID++D+IL+M+VNPGFGGQ IES K+ A+ +I K+ I LEVDGGV + NI
Sbjct: 126 YIIDDLDIILVMSVNPGFGGQSFIESQYLKLIDARNMIKASKKDIILEVDGGVKTSNIDK 185
Query: 186 LVQAGADLLVVGSSFFNQKGEIS---YAKRLN 214
+++AGADL+V GS FN E Y ++LN
Sbjct: 186 VLEAGADLIVSGSDVFNHNIESQLDIYNQKLN 217
>gi|50123009|ref|YP_052176.1| ribulose-phosphate 3-epimerase [Pectobacterium atrosepticum
SCRI1043]
gi|49613535|emb|CAG76986.1| ribulose-phosphate 3-epimerase [Pectobacterium atrosepticum
SCRI1043]
Length = 225
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 139/206 (67%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTTNVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI ++ +AGAD+ V GS+ F
Sbjct: 180 VKVENIGAIAEAGADMFVAGSAIFGH 205
>gi|15674444|ref|NP_268618.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes M1 GAS]
gi|19745396|ref|NP_606532.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS8232]
gi|50913602|ref|YP_059574.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10394]
gi|56808436|ref|ZP_00366183.1| COG0036: Pentose-5-phosphate-3-epimerase [Streptococcus pyogenes
M49 591]
gi|71910038|ref|YP_281588.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS5005]
gi|94989733|ref|YP_597833.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10270]
gi|94993615|ref|YP_601713.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10750]
gi|139473082|ref|YP_001127797.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes str.
Manfredo]
gi|209558788|ref|YP_002285260.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes NZ131]
gi|93279627|pdb|2FLI|A Chain A, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279628|pdb|2FLI|B Chain B, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279629|pdb|2FLI|C Chain C, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279630|pdb|2FLI|D Chain D, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279631|pdb|2FLI|E Chain E, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279632|pdb|2FLI|F Chain F, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279633|pdb|2FLI|G Chain G, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279634|pdb|2FLI|H Chain H, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279635|pdb|2FLI|I Chain I, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279636|pdb|2FLI|J Chain J, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279637|pdb|2FLI|K Chain K, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279638|pdb|2FLI|L Chain L, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|13621540|gb|AAK33339.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes M1
GAS]
gi|19747504|gb|AAL97031.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes
MGAS8232]
gi|50902676|gb|AAT86391.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10394]
gi|71852820|gb|AAZ50843.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS5005]
gi|94543241|gb|ABF33289.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10270]
gi|94547123|gb|ABF37169.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10750]
gi|134271328|emb|CAM29546.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes
str. Manfredo]
gi|209539989|gb|ACI60565.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes NZ131]
Length = 220
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 10/216 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP TP
Sbjct: 63 VFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGG 177
LE ++D +D +LIMTVNPGFGGQ I +T+ K R K L S +EVDGG
Sbjct: 123 TALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGL----SFDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V ++ I++ +AGA++ V GS F +S + L
Sbjct: 179 VDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTL 214
>gi|227326816|ref|ZP_03830840.1| ribulose-phosphate 3-epimerase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 225
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 139/206 (67%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTANVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI ++ +AGAD+ V GS+ F
Sbjct: 180 VKVENIGAIAEAGADMFVAGSAIFGH 205
>gi|304437054|ref|ZP_07397017.1| ribulose-phosphate 3-epimerase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370005|gb|EFM23667.1| ribulose-phosphate 3-epimerase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 236
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 3/201 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+I + PSIL+ADF+ LG E+ + +AGA+ IH DVMDG FVPNI+ GA V+ SLR S
Sbjct: 23 PTI-VAPSILSADFANLGAEVRRVEEAGAEYIHIDVMDGTFVPNITMGACVVESLRKVSK 81
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+VFD HLM+ ++HI A AG DIITFH E++ H R ++ I A G + G+A+NP T
Sbjct: 82 TVFDVHLMVEHPETHIESFARAGADIITFHVEATRHAHRVIQQIKAAGCRAGIALNPGTS 141
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ LE++ID++DM+L+MTVNPG GGQ+ IE+T+ KI I + + +EVDGG+ +
Sbjct: 142 IYTLEELIDDVDMVLLMTVNPGLGGQKFIENTLGKIHALYHTIEGNELDVDIEVDGGINA 201
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
+S+ AGA++LV GS +
Sbjct: 202 ETAESVRSAGANVLVAGSYIY 222
>gi|253690240|ref|YP_003019430.1| ribulose-phosphate 3-epimerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756818|gb|ACT14894.1| ribulose-phosphate 3-epimerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 225
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 139/206 (67%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTANVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI ++ +AGAD+ V GS+ F
Sbjct: 180 VKVENIGAIAEAGADMFVAGSAIFGH 205
>gi|260772073|ref|ZP_05880990.1| ribulose-phosphate 3-epimerase [Vibrio metschnikovii CIP 69.14]
gi|260612940|gb|EEX38142.1| ribulose-phosphate 3-epimerase [Vibrio metschnikovii CIP 69.14]
Length = 226
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 147/219 (67%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG+++ + AGA IHFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGDDVDKVLAAGADVIHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG +ITFH E+S H+ R+L+ I G + GV +NP TP++
Sbjct: 66 DVHLMVEPVDRIIPDFANAGASMITFHVEASKHVDRTLQLIKEHGCQAGVVLNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + RSI LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERITQSGRSIRLEIDGGVKVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + QAGAD+ V GS+ F GE Y K + D +S LA
Sbjct: 186 REIAQAGADMFVAGSAIF---GEPDY-KAVIDAMRSELA 220
>gi|226313310|ref|YP_002773204.1| ribulose-5-phosphate 3-epimerase [Brevibacillus brevis NBRC 100599]
gi|226096258|dbj|BAH44700.1| ribulose-5-phosphate 3-epimerase [Brevibacillus brevis NBRC 100599]
Length = 216
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 136/203 (66%), Gaps = 3/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSADFARLGEEILDVEKGGADWIHVDVMDGHFVPNITIGPLIVEAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A +G D IT H E+ H+ R+L I G K GV +NP TP++
Sbjct: 62 LDVHLMIEEPDRYIPQFAKSGADWITVHQEACRHLHRTLYLIKEQGVKAGVVLNPATPIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSR 181
+E V+ ++DM+L+MTVNPGFGGQ+ I S +PK+ Q + ++ +R + +E+DGGV ++
Sbjct: 122 TIEPVLADLDMVLLMTVNPGFGGQKFIHSVVPKVAQLRQMLNERGLGHVEIEIDGGVNAQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
+ +AGA +LV GS+ FNQ+
Sbjct: 182 TARLCEEAGATVLVAGSAVFNQE 204
>gi|94987857|ref|YP_595958.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS9429]
gi|94991739|ref|YP_599838.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS2096]
gi|94541365|gb|ABF31414.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS9429]
gi|94545247|gb|ABF35294.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS2096]
Length = 220
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 10/216 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP TP
Sbjct: 63 VFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGTLQKIKAAGMKAGVVINPGTPA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGG 177
LE ++D +D +LIMTVNPGFGGQ I +T+ K R K L S +EVDGG
Sbjct: 123 TALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGL----SFDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V ++ I++ +AGA++ V GS F +S + L
Sbjct: 179 VDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTL 214
>gi|330828674|ref|YP_004391626.1| Ribulose-phosphate 3-epimerase [Aeromonas veronii B565]
gi|328803810|gb|AEB49009.1| Ribulose-phosphate 3-epimerase [Aeromonas veronii B565]
Length = 227
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG++++ + AGA +HFDVMD +VPN++ G V ++LR Y ++
Sbjct: 9 IAPSILSADFARLGDDVAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYGIEAPI 68
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFHPE+S H+ RSL I MG + G+ +NP T ++
Sbjct: 69 DVHLMVKPVDRIIPDFAKAGASLITFHPEASDHVDRSLGLIKEMGCQAGLVLNPATSLSC 128
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + R I LE+DGGV NI
Sbjct: 129 LEYVMDKLDVILLMSVNPGFGGQSFIPGTLDKLRQVRRLIDESGRDIRLEIDGGVKVDNI 188
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F+Q
Sbjct: 189 REIAEAGADMFVAGSAIFSQ 208
>gi|205373326|ref|ZP_03226130.1| ribulose-phosphate 3-epimerase [Bacillus coahuilensis m4-4]
Length = 216
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+L +EI + GA IH DVMDG FVPNI+ G +++++R ++
Sbjct: 1 MKIAPSILSADFSQLKKEIQEVENGGADYIHIDVMDGHFVPNITIGPLIVKAVRPHTSLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I+ AG DIIT H E+ PHI R+++ I G K GV +NP TP++
Sbjct: 61 LDVHLMIEKPELYIDEFVSAGADIITVHIEACPHIHRTIQQIKGHGIKAGVVLNPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ ++++IDM+LIMTVNPGFGGQQ IE I KIR+ + I R I +EVDGG+
Sbjct: 121 SIQHILEDIDMVLIMTVNPGFGGQQFIEGMIEKIRELRNTINARGLDIEIEVDGGINEDT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I+S + AGAD+ V GS+ +N + + RL K
Sbjct: 181 IQSCLHAGADVFVAGSAVYNHQDRKAAITRLKQAVK 216
>gi|197286857|ref|YP_002152729.1| ribulose-phosphate 3-epimerase [Proteus mirabilis HI4320]
gi|227354956|ref|ZP_03839367.1| ribulose-phosphate 3-epimerase [Proteus mirabilis ATCC 29906]
gi|194684344|emb|CAR45963.1| ribulose-phosphate 3-epimerase [Proteus mirabilis HI4320]
gi|227164743|gb|EEI49590.1| ribulose-phosphate 3-epimerase [Proteus mirabilis ATCC 29906]
Length = 224
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 143/216 (66%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++FGA + ++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG I+FH E+S H+ R+++ I G K G+ +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAQAGATYISFHAEASEHVDRTIQLIKDCGCKAGLVLNPATPLNY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I G I LE+DGGV NI
Sbjct: 126 LDYVMDKLDLILLMSVNPGFGGQSFIPKTLDKLRQVRKMIDDGGYDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ QAGAD+ V GS+ FNQ Y + ++++++
Sbjct: 186 AEIAQAGADMFVAGSAIFNQP---DYKQVIDNMRRE 218
>gi|319764710|ref|YP_004128647.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans BC]
gi|330826918|ref|YP_004390221.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans K601]
gi|317119271|gb|ADV01760.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans BC]
gi|329312290|gb|AEB86705.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans K601]
Length = 226
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 153/230 (66%), Gaps = 12/230 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V ++L+ +
Sbjct: 1 MSRTYRIAPSILSADFARLGEEVRSVIAAGADWIHFDVMDNHYVPNLTFGPMVCQALKPH 60
Query: 61 S-----DSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ SV D HLM+ +D+ A AG D+I+FHP++S H+ RS++ I A G K G
Sbjct: 61 AVTPGGQSVPIDVHLMVQPVDALAEAFAQAGADLISFHPDASAHVHRSIQAIKARGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
+ NP P+ +L+ VI++ID+IL+M+VNPGFGGQ I+ST+ KI A+ I + I L
Sbjct: 121 LTFNPAMPLDVLDWVIEDIDLILLMSVNPGFGGQGFIDSTLRKIEAARKRIEASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
EVDGG+ + NI+ + AGAD V GS+ F G+ Y K + D ++ALA
Sbjct: 181 EVDGGIKTDNIRRVADAGADTFVAGSAIF---GKPDY-KAVIDAMRAALA 226
>gi|86132635|ref|ZP_01051228.1| ribulose-phosphate 3-epimerase [Dokdonia donghaensis MED134]
gi|85816877|gb|EAQ38062.1| ribulose-phosphate 3-epimerase [Dokdonia donghaensis MED134]
Length = 219
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L +I I + A H D+MDG FVPNISFG V+R + ++ D
Sbjct: 6 IAPSILAADFANLQRDIEMINNSDADWFHIDIMDGVFVPNISFGMPVLRDITKHASKPID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I AD G DI+T H E+ H+ R+L+ I G K GVA+NP TP+++L
Sbjct: 66 VHLMIVDPDRYIQTFADLGADILTVHYEACTHLHRTLQAIKDAGMKAGVALNPHTPISLL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
EDVI +ID++ +M+VNPGFGGQ+ IE+T K+ +LI ++ + +E+DGGVT++N
Sbjct: 126 EDVIRDIDLVCVMSVNPGFGGQKFIENTYDKVAALNSLIIRKGATTLIEIDGGVTNKNAS 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
L++ GAD+LV GS F + ++ K L
Sbjct: 186 QLIEKGADVLVAGSYVFKSENPVTTIKNL 214
>gi|254453062|ref|ZP_05066499.1| ribulose-phosphate 3-epimerase [Octadecabacter antarcticus 238]
gi|198267468|gb|EDY91738.1| ribulose-phosphate 3-epimerase [Octadecabacter antarcticus 238]
Length = 229
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 134/198 (67%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ LG EI I GA IH D MDG FVPN++ G +V+ ++R + +
Sbjct: 6 SIKIAPSILSADFANLGAEIQAIEARGADWIHVDPMDGHFVPNLTIGPNVVAAIRPHVKT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMIS D +I A AG D+IT H E+ PH+ RSL+++ A GK GVA+N TP+
Sbjct: 66 FMDVHLMISPADPYIGAFAKAGSDMITVHAEAGPHLHRSLQSVRAEGKMAGVALNMTTPL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ D++D+IDMILIMT+NPGFGGQ+ + I K+ + +A+I R I ++VDGG+
Sbjct: 126 DHVADILDDIDMILIMTINPGFGGQKFTHAMIDKVARCRAMIADRPIHIQVDGGIDPTTA 185
Query: 184 KSLVQAGADLLVVGSSFF 201
+ +AGA++LV GS+ F
Sbjct: 186 PLVAKAGANVLVAGSAVF 203
>gi|21909728|ref|NP_663996.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS315]
gi|28895109|ref|NP_801459.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes SSI-1]
gi|21903912|gb|AAM78799.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes
MGAS315]
gi|28810354|dbj|BAC63292.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes
SSI-1]
Length = 220
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 10/216 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP TP
Sbjct: 63 VFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGG 177
LE ++D +D +LIMTVNPGFGGQ I +T+ K R K L S +EVDGG
Sbjct: 123 TALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGL----SFDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V ++ I++ +AGA++ V GS F +S + L
Sbjct: 179 VDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTL 214
>gi|167648735|ref|YP_001686398.1| ribulose-phosphate 3-epimerase [Caulobacter sp. K31]
gi|167351165|gb|ABZ73900.1| Ribulose-phosphate 3-epimerase [Caulobacter sp. K31]
Length = 221
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DF++LGEE++ I AGA +H DVMDG FVPNI+ G D+++++R ++ FD
Sbjct: 8 IAPSILASDFAKLGEEVAAIEAAGADWVHVDVMDGHFVPNITLGPDIVKAIRPHAKIPFD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D ++ AG D+I+ HPE+ PH+ RSL+ I +G K GV NP T + +
Sbjct: 68 VHLMISPADPYLEAFRAAGADLISIHPEAGPHLHRSLKRIRELGAKAGVVFNPSTSIDHV 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E +++++D++L+M+VNPGFGGQ I + K+ + ++ +R + +EVDGGVT
Sbjct: 128 EWILEDVDLLLVMSVNPGFGGQSFIPGQLRKVEALRKMVDQRGLDIIIEVDGGVTPATAP 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V AGA LV GS+ F + G +YA + LK
Sbjct: 188 QCVAAGATALVAGSAVF-KGGPDAYAANIRALK 219
>gi|302381397|ref|YP_003817220.1| ribulose-phosphate 3-epimerase [Brevundimonas subvibrioides ATCC
15264]
gi|302192025|gb|ADK99596.1| ribulose-phosphate 3-epimerase [Brevundimonas subvibrioides ATCC
15264]
Length = 237
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DF++LG E++ I AGA +H DVMDG FVPNI+ G DV+++LR ++ FD
Sbjct: 24 ICPSILASDFAKLGAEVAAIEAAGADWVHVDVMDGHFVPNITIGPDVVKALRPHTSLPFD 83
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D + +AG DI+T HPES PH+ R+L I +G K GV +NP TP+++L
Sbjct: 84 VHLMVAPVDPWLEAYREAGADILTVHPESGPHLHRTLGRIRQLGAKAGVVLNPGTPLSVL 143
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
EDVI+ +D++L+M+VNPGFGGQ I ST+ KI + +A++ S L+VDGGVT+ N
Sbjct: 144 EDVIELVDLVLLMSVNPGFGGQSFIGSTLKKIERTRAMLDAAGSSAHLQVDGGVTAANAG 203
Query: 185 SLVQAGADLLVVGSSFFN 202
+ V AGAD LV G++ F
Sbjct: 204 ACVAAGADALVAGTAVFR 221
>gi|209542804|ref|YP_002275033.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530481|gb|ACI50418.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 225
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADFSR+ +E+S + +AGA +H DVMDG FVPN+SFGA +I++LR S VFD
Sbjct: 9 VAPSVLSADFSRMADEVSAVERAGADWLHLDVMDGHFVPNLSFGAQLIKALRPRSSLVFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D ++ + A AG D I H E+ PH R+L+ I ++G K GVAI P TP +
Sbjct: 69 VHLMMAPVDPYLEMFAQAGADHIHVHIEAGPHTHRTLQHIRSLGVKPGVAICPATPPEAV 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+V+D +D+IL+MTVNPGFGGQ+ + S + KIR + L R I + VDGGV
Sbjct: 129 AEVLDLVDVILVMTVNPGFGGQKFLTSQLGKIRTLRRLADATGRDIRIGVDGGVDVETAA 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGAD+LV G+S + Q Y + ++ L+++
Sbjct: 189 LATEAGADMLVAGTSVYGQP---DYGRAISALREA 220
>gi|291166477|gb|EFE28523.1| ribulose-phosphate 3-epimerase [Filifactor alocis ATCC 35896]
Length = 219
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 145/218 (66%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADFS+L E + + AG + +H DVMDG FVPNI+FGA V LR S+
Sbjct: 2 IKLAPSILSADFSQLAESVKAVENAGCEYLHIDVMDGHFVPNITFGAVVFEKLRKKSNMT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLMI D ++ AG DIIT H E+ H+ R++ I +G K GVAINP T
Sbjct: 62 FDCHLMIEQPDLYLEDFVKAGADIITVHQEACVHLNRTIHHIKELGCKAGVAINPATSPQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
LE V+ ++DM+LIM+VNPGFGGQ+ I ++ KI++ K +I + ++ ++VDGGV+ N
Sbjct: 122 ALEYVLQDVDMVLIMSVNPGFGGQKFIPQSLDKIKKLKQMIDAKNYNVDIQVDGGVSVDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +V AGA+++V GS+ F G+ + K +++L+ SA
Sbjct: 182 IHDIVTAGANIVVAGSAIF---GKDNIQKAVSNLRDSA 216
>gi|212709410|ref|ZP_03317538.1| hypothetical protein PROVALCAL_00449 [Providencia alcalifaciens DSM
30120]
gi|212687925|gb|EEB47453.1| hypothetical protein PROVALCAL_00449 [Providencia alcalifaciens DSM
30120]
Length = 224
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 142/216 (65%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA IHFDVMD +VPN++FGA + ++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADIIHFDVMDNHYVPNLTFGAPICKALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG I+FHPE+S HI R+L+ I G G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGATHISFHPEASEHIDRTLQLIKENGCTAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I T+ K+RQ + LI + I LEVDGGV NI
Sbjct: 126 LDYVMDKVDMILLMSVNPGFGGQSFIPQTLNKLRQVRKLIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD V GS+ F+Q Y K ++++++
Sbjct: 186 AEIAAAGADTFVAGSAIFDQS---DYKKVIDEMRQE 218
>gi|254246440|ref|ZP_04939761.1| Ribulose-phosphate 3-epimerase [Burkholderia cenocepacia PC184]
gi|124871216|gb|EAY62932.1| Ribulose-phosphate 3-epimerase [Burkholderia cenocepacia PC184]
Length = 228
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 142/225 (63%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F G+ Y K +N++ ++ALA
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRKVINEM-RAALA 223
>gi|291518524|emb|CBK73745.1| ribulose-phosphate 3-epimerase [Butyrivibrio fibrisolvens 16/4]
Length = 217
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 146/213 (68%), Gaps = 2/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF L E++ I +AGA+ +HFDVMDG FVP+ISFG V+R++R Y+D +FD
Sbjct: 5 LAPSILSADFGILKEQLQLIDQAGAQYVHFDVMDGVFVPSISFGLPVLRTIRKYTDRLFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ A+AG DIIT H E+ H+ ++ I + G GVAINP TP++ +
Sbjct: 65 VHLMIVDPERYVKEFAEAGADIITVHAEACKHLDATIDLIKSSGVMAGVAINPATPLSDI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
V++++DM+LIMTVNPGFGGQ +I T+ K+R+ + ++ I +EVDGGV I+
Sbjct: 125 MHVLEKVDMVLIMTVNPGFGGQSMIPYTLDKVRELSVMARQKKLKIDIEVDGGVNENTIE 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+++AGA+++V GS+ FN +++ + L ++
Sbjct: 185 DVLEAGANIIVAGSAVFNGDAKLNAERLLEKMQ 217
>gi|329891091|ref|ZP_08269434.1| ribulose-phosphate 3-epimerase [Brevundimonas diminuta ATCC 11568]
gi|328846392|gb|EGF95956.1| ribulose-phosphate 3-epimerase [Brevundimonas diminuta ATCC 11568]
Length = 227
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 149/216 (68%), Gaps = 3/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEEI + AGA IH DVMDG FVPN++ G DV+++LR ++ FD
Sbjct: 12 ICPSILASDFSKLGEEIRALEAAGADWIHVDVMDGHFVPNLTIGPDVVKALRPHTSLPFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D+ + AG D+++ HPES PH+ R+L I +G K G+ NP TP+++L
Sbjct: 72 VHLMVAPVDNWLEAFRAAGADVMSVHPESGPHVHRTLGQIRQLGAKAGLVFNPATPLSVL 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+ ++ +D++LIM+VNPGFGGQ+ IE+++ KI +A+A++ + L+VDGGV + N
Sbjct: 132 EEAVELVDLVLIMSVNPGFGGQKFIETSLKKIERARAILDRAGSKAHLQVDGGVVAANAG 191
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ V AGAD LV GS F + G +YA + LK +A
Sbjct: 192 ACVAAGADALVAGSFVF-KGGPEAYAANIQALKAAA 226
>gi|237739711|ref|ZP_04570192.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 2_1_31]
gi|229423319|gb|EEO38366.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 2_1_31]
Length = 215
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 143/217 (65%), Gaps = 6/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA IH DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTKGIKIAPSILSSDFSKLGEELVAIDKAGADYIHIDVMDGEFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDRPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TSEDVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RADIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
IK AGA++ V GS F+ Y +R++ LK
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----DYKERIDLLK 211
>gi|71902884|ref|YP_279687.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS6180]
gi|71801979|gb|AAX71332.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS6180]
Length = 220
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 10/216 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP TP
Sbjct: 63 VFDCHLMVVDPERYVEAFAQAGVDIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGG 177
LE ++D +D +LIMTVNPGFGGQ I +T+ K R K L S +EVDGG
Sbjct: 123 TALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGL----SFDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V ++ I++ +AGA++ V GS F +S + L
Sbjct: 179 VDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTL 214
>gi|51892493|ref|YP_075184.1| ribulose-5-phosphate 3-epimerase [Symbiobacterium thermophilum IAM
14863]
gi|51856182|dbj|BAD40340.1| ribulose-5-phosphate 3-epimerase [Symbiobacterium thermophilum IAM
14863]
Length = 220
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 140/217 (64%), Gaps = 7/217 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF+ LG E++ I AGA H DVMDG FVPNI+FG VI LR S
Sbjct: 1 MKVAPSLLSADFAALGAELAAIEAAGADWAHLDVMDGHFVPNITFGPPVIAKLRPRSKLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I AG D+IT H E+ H+ R L I G K GVA+NP TPV+
Sbjct: 61 FDAHLMIRHPERYIGDFVKAGADLITVHAEACDHLHRVLGQIREAGVKAGVALNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVTS 180
+L V+D +D++LIMTVNPGFGGQ+ I++ +PK+RQA+A++ + ++ ++VDGGV
Sbjct: 121 VLAHVLDMVDLVLIMTVNPGFGGQRFIDACLPKVRQARAMLAEAGLADRVEIQVDGGVDP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V+AGA +LV G++ F G+ YA + L+
Sbjct: 181 HTAPRCVEAGATVLVAGTAVF---GKDDYAAAIAALR 214
>gi|299535927|ref|ZP_07049247.1| ribulose-phosphate 3-epimerase [Lysinibacillus fusiformis ZC1]
gi|298728679|gb|EFI69234.1| ribulose-phosphate 3-epimerase [Lysinibacillus fusiformis ZC1]
Length = 223
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 138/202 (68%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSILAA+F+ LGEE+ + +AGA+ IH DVMDG FVPNISFG+ V+ ++R +
Sbjct: 3 IQIAPSILAANFANLGEEVKEVEQAGAQLIHIDVMDGHFVPNISFGSIVLDAIRPLTKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 63 LDVHLMIENPDQYIEQFAKAGADYITVHVEACHHLHRTIQLIRSFGVKAGVVLNPHTPIE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ ++++IDM+L+MTVNPGFGGQ+ I S + KI +I +R I++E+DGG+T+
Sbjct: 123 SIQHILEDIDMVLLMTVNPGFGGQKFIHSVVSKIEALSTIIKERGLDIAIEIDGGITAET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I QAGA + V GS+ ++++
Sbjct: 183 IVPCAQAGATIFVAGSAIYSKE 204
>gi|260913446|ref|ZP_05919924.1| ribulose-phosphate 3-epimerase [Pasteurella dagmatis ATCC 43325]
gi|260632386|gb|EEX50559.1| ribulose-phosphate 3-epimerase [Pasteurella dagmatis ATCC 43325]
Length = 222
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 146/222 (65%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ N+ +GA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVQNVLNSGADIIHFDVMDNHYVPNLTFGPPICKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE++ HI RSL+ + G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEATEHIDRSLQLVRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+R+ + I I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKVDVILLMSVNPGFGGQSFIPSTLDKLREVRKRIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI + +AGAD+ V GS+ F+Q Y K ++++++
Sbjct: 180 VKVNNIAEIAKAGADMFVAGSAIFDQP---DYKKVIDEMRQQ 218
>gi|320539807|ref|ZP_08039466.1| D-ribulose-5-phosphate 3-epimerase [Serratia symbiotica str.
Tucson]
gi|320029993|gb|EFW12013.1| D-ribulose-5-phosphate 3-epimerase [Serratia symbiotica str.
Tucson]
Length = 225
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE+ +N+ AG +HFDVMD +VPN++ G V +LR+Y S
Sbjct: 6 IAPSILSADFARLGEDTANMLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGISAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ITFHPE+S HI R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYITFHPEASEHIARTLQLIQEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+ID+ILIM+VNPGFGGQ I + K+RQ + LI R I LEVDGGV NI
Sbjct: 126 LDYVMDKIDVILIMSVNPGFGGQSFIHGPLGKLRQVRKLIDASGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G+ Y K ++D++
Sbjct: 186 AEIAAAGADMFVAGSAIF---GKPDYRKVIDDMR 216
>gi|159045546|ref|YP_001534340.1| ribulose-phosphate 3-epimerase [Dinoroseobacter shibae DFL 12]
gi|157913306|gb|ABV94739.1| ribulose-phosphate 3-epimerase [Dinoroseobacter shibae DFL 12]
Length = 232
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 134/199 (67%), Gaps = 1/199 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSILAADF+ G E + + GA +H DVMDG FVPNI+FG ++R +
Sbjct: 6 SIKIAPSILAADFANFGAECAAVEAQGADWVHVDVMDGHFVPNITFGPATCAAIRPHIKG 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ +D +I+ ADAG D+IT H E+ PHI R+L+ I G K G+A+NP T +
Sbjct: 66 VMDVHLMIAPVDPYIDAFADAGADVITAHLEAGPHIHRTLQAIRGAGAKAGLALNPGTGL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D +D++ +MTVNPGFGGQ+ ++ + KIR +A+IG R I +E+DGGVT +
Sbjct: 126 GDVGHLLDMVDLVCVMTVNPGFGGQKFLDMSA-KIRDLRAMIGDRPIHIEIDGGVTPQTA 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGAD+LV GS+ F
Sbjct: 185 PLVAKAGADVLVAGSAVFK 203
>gi|306828030|ref|ZP_07461295.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes ATCC 10782]
gi|304429746|gb|EFM32790.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes ATCC 10782]
Length = 220
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 10/216 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSRL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP TP
Sbjct: 63 VFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGG 177
LE ++D +D +LIMTVNPGFGGQ I +T+ K R K L S +EVDGG
Sbjct: 123 TALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGL----SFDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V ++ I++ +AGA++ V GS F +S + L
Sbjct: 179 VDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTL 214
>gi|260222538|emb|CBA32200.1| Ribulose-phosphate 3-epimerase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 225
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 139/208 (66%), Gaps = 8/208 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + +L+ ++ +
Sbjct: 2 TYRIAPSILSADFARLGEEVKNVIAAGADWIHFDVMDNHYVPNLTFGPMICSALKPHAKT 61
Query: 64 V------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D HLMIS +D+ A+AG D I+FHP++S H+ RS++ I + G K G+
Sbjct: 62 AEGVAVPIDVHLMISPVDALAASFAEAGADYISFHPDASGHVHRSVQAIKSKGVKAGLVF 121
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVD 175
NP P+ +L+ VID+ID+ILIM+VNPGFGGQ I+S + KI A+ I + I LEVD
Sbjct: 122 NPAEPLDVLDWVIDDIDLILIMSVNPGFGGQSFIDSALRKIEAARKRIDASGKDIRLEVD 181
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GG+ + NI+ + AGAD V GS+ F +
Sbjct: 182 GGIKTDNIRRVADAGADTFVAGSAIFGK 209
>gi|127511153|ref|YP_001092350.1| ribulose-phosphate 3-epimerase [Shewanella loihica PV-4]
gi|126636448|gb|ABO22091.1| ribulose-5-phosphate 3-epimerase [Shewanella loihica PV-4]
Length = 224
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 144/227 (63%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE++ + KAGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGEDVEAVLKAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I DAG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRIIPDFVDAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ FN+ Y +++++ +D
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNKP---DYKAVIDEMRSELAKVD 223
>gi|121997839|ref|YP_001002626.1| ribulose-phosphate 3-epimerase [Halorhodospira halophila SL1]
gi|121589244|gb|ABM61824.1| ribulose-5-phosphate 3-epimerase [Halorhodospira halophila SL1]
Length = 226
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
I PSIL+ADF+RLG+E++ + +AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 5 WIAPSILSADFARLGDEVNAVLQAGADVIHFDVMDNHYVPNLTIGPLVCQALRDHGITAP 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +D I A AG D ITFHPE+S H+ RSL I G K G+ NP TP+
Sbjct: 65 IDVHLMIKPVDRIIPDFAAAGADWITFHPEASEHVDRSLSLIREHGCKAGLVFNPATPLD 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L V D++DM+L+M+VNPGFGGQ+ I T+ KIR+A+ LI + + LEVDGG+ + N
Sbjct: 125 CLRYVADKVDMVLLMSVNPGFGGQKFIPGTVDKIREARRLIDELNPGARLEVDGGIKAEN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ + +AGAD V GS+ F G Y + + D++K
Sbjct: 185 IRQVAEAGADTFVAGSAVF---GADDYGQAIADMRKE 218
>gi|253987551|ref|YP_003038907.1| ribulose-phosphate 3-epimerase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779001|emb|CAQ82161.1| ribulose-phosphate 3-epimerase [Photorhabdus asymbiotica]
Length = 230
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG + + + AGA +HFDVMD +VPN++FG V ++LR+Y +
Sbjct: 10 IAPSILSADFARLGADTAEVLAAGADVVHFDVMDNHYVPNLTFGPMVCQALRNYGITAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S HI RSL+ I G K G+ NP TP++
Sbjct: 70 DVHLMVKPVDRIIPDFAKAGATYITFHPEASEHIDRSLQLIKEYGCKAGLVFNPATPLSY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I K I LEVDGG+ + NI
Sbjct: 130 LDYVLDKLDVILLMSVNPGFGGQSFIPRTLDKLRQVRKIIDKSGYDIRLEVDGGIKTSNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+AGAD+ V GS+ F+Q
Sbjct: 190 AQAAEAGADMFVAGSAIFSQ 209
>gi|162148165|ref|YP_001602626.1| ribulose-phosphate 3-epimerase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161786742|emb|CAP56325.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 245
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADFSR+ +E+S + +AGA +H DVMDG FVPN+SFGA +I++LR S VFD
Sbjct: 29 VAPSVLSADFSRMADEVSAVERAGADWLHLDVMDGHFVPNLSFGAQLIKALRPQSSLVFD 88
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D ++ + A AG D I H E+ PH R+L+ I ++G K GVAI P TP +
Sbjct: 89 VHLMMAPVDPYLEMFAQAGADHIHVHIEAGPHTHRTLQHIRSLGVKPGVAICPATPPEAV 148
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+V+D +D+IL+MTVNPGFGGQ+ + S + KIR + L R I + VDGGV
Sbjct: 149 AEVLDLVDVILVMTVNPGFGGQKFLTSQLGKIRTLRRLADATGRDIRIGVDGGVDVETAA 208
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGAD+LV G+S + Q Y + ++ L+++
Sbjct: 209 LATEAGADMLVAGTSVYGQP---DYGRAISALREA 240
>gi|306834358|ref|ZP_07467475.1| ribulose-phosphate 3-epimerase [Streptococcus bovis ATCC 700338]
gi|304423531|gb|EFM26680.1| ribulose-phosphate 3-epimerase [Streptococcus bovis ATCC 700338]
Length = 220
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 132/198 (66%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ A AG DI+T H ES+ HI +L+ I A G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERYVDAFAQAGADIMTIHAESTLHIHGALQKIKAAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I T+ K+ + L ++ +EVDGGV ++ I
Sbjct: 125 IESVLSLVDQVLIMTVNPGFGGQAFIPETLEKVAKVAQLRDEKGYDFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ AGA++ V GS F
Sbjct: 185 KACYDAGANVFVAGSYLF 202
>gi|254253353|ref|ZP_04946671.1| Ribulose-phosphate 3-epimerase [Burkholderia dolosa AUO158]
gi|124895962|gb|EAY69842.1| Ribulose-phosphate 3-epimerase [Burkholderia dolosa AUO158]
Length = 228
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 142/225 (63%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYIERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F G+ Y K ++D+ ++ALA
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRKVIDDM-RAALA 223
>gi|319791220|ref|YP_004152860.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus EPS]
gi|315593683|gb|ADU34749.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus EPS]
Length = 230
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 145/227 (63%), Gaps = 11/227 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL+ADF+ LG+E++++ AGA IHFDVMD +VPN++FG + ++L+ Y
Sbjct: 1 MSTPFRIAPSILSADFAHLGQELTDVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPY 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLMI +D+ A AG D I+FHP++SPH+ RS++ I A G K G
Sbjct: 61 AKTADGTPVPIDVHLMIQPVDALAASFAQAGADYISFHPDASPHVHRSIQAIKAAGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP + L+ ID+ID+ILIM+VNPGFGGQ I+S + KI A+ I + R I L
Sbjct: 121 LVFNPGLGLEALDWAIDDIDLILIMSVNPGFGGQSFIDSALRKIELARKRIEQSGRDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
EVDGG+ + NI + AGAD V GS+ FN K Y + +++K+
Sbjct: 181 EVDGGIKADNIARVASAGADTFVAGSAIFNAK---DYGAVIGEMRKN 224
>gi|251783336|ref|YP_002997641.1| ribulose-phosphate 3-epimerase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391968|dbj|BAH82427.1| ribulose-phosphate 3-epimerase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323128059|gb|ADX25356.1| ribulose-phosphate 3-epimerase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 220
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 138/216 (63%), Gaps = 10/216 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP TP+
Sbjct: 63 VFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGG 177
LE ++D +D +LIMTVNPGFGGQ I +T+ K R K L + +EVDGG
Sbjct: 123 TALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVTTLAKWRDEKGL----AFDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V ++ I++ +AGA++ V GS F +S + L
Sbjct: 179 VDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTL 214
>gi|218886079|ref|YP_002435400.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757033|gb|ACL07932.1| Ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 219
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 146/214 (68%), Gaps = 5/214 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L++DF RL +E++ + AG +H+DVMDG FVPNI++G VI LR S FD H
Sbjct: 5 PSLLSSDFGRLADELAALEAAGLSWVHWDVMDGTFVPNITYGQPVIAHLRKQSRLFFDVH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+ + +++ DAG D++ H E++PH++R+L I +G K+GVA+NP TP+++L+
Sbjct: 65 LMVERPERYLHEFVDAGADMLVVHAEATPHVQRALAEIRRLGVKSGVALNPHTPLSVLDY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
V+D+ DM+LIMTVNPGFGGQ + ++ KI + +A+I R +S ++VDGGV N L
Sbjct: 125 VLDDADMVLIMTVNPGFGGQSFLPASYRKISELRAMINARGLSTLIQVDGGVDPSNTAKL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
VQ+GAD+LV GS+FF YA+RL + +A
Sbjct: 185 VQSGADVLVSGSAFFKFP---PYAERLKAFEAAA 215
>gi|323692056|ref|ZP_08106303.1| ribulose-phosphate 3-epimerase [Clostridium symbiosum WAL-14673]
gi|323503856|gb|EGB19671.1| ribulose-phosphate 3-epimerase [Clostridium symbiosum WAL-14673]
Length = 222
Score = 199 bits (505), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 139/199 (69%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL ADF RLGE++ + +AGA IH D+MDG FVP+ISFG +I SLRS ++
Sbjct: 2 IILAPSILGADFKRLGEQVQEVDRAGAPYIHLDIMDGTFVPSISFGMPLIESLRSCTNKT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ +++ + AG D+I H E+ H+ R++ I G TGVA+NP TPV+
Sbjct: 62 FDVHMMVEEPGRYVDDMKKAGADLICVHQEACTHLDRTINQIKEAGLMTGVALNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
L +++++DM+LIM+VNPGFGGQ+ I T+ KIR+ + L ++ + S++VDGG++ N
Sbjct: 122 TLSCILEQVDMVLIMSVNPGFGGQKFIPYTLGKIRELRNLCNEKGLATSIQVDGGISPAN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
++ +++AGAD++V GS+ F
Sbjct: 182 VRDVIEAGADVIVAGSAVF 200
>gi|237809353|ref|YP_002893793.1| ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
gi|237501614|gb|ACQ94207.1| ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
Length = 226
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 145/223 (65%), Gaps = 4/223 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+++N+ AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 3 MKPYL-IAPSILSADFARLGEDVANVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 61
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H R+L+ I G + G+ +NP
Sbjct: 62 GITAPIDVHLMVKPVDRIIPDFAKAGASIITFHPEASEHPDRTLQLIKEHGCQAGLVLNP 121
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + I + R I LEVDGG
Sbjct: 122 ATSLHYLDHVMDKLDIILLMSVNPGFGGQSFIPATLDKLRQVRQRIQQSGRDIRLEVDGG 181
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V + NI+ + AGAD+ V GS+ F+Q + R+ SA
Sbjct: 182 VKTDNIRQIADAGADMFVAGSAIFDQPDYAAVIARMRQELDSA 224
>gi|260574365|ref|ZP_05842369.1| ribulose-phosphate 3-epimerase [Rhodobacter sp. SW2]
gi|259023261|gb|EEW26553.1| ribulose-phosphate 3-epimerase [Rhodobacter sp. SW2]
Length = 229
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 136/205 (66%), Gaps = 1/205 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+ G E I GA +H DVMDG FVPN++FG + ++R +
Sbjct: 5 SIKISPSILSADFANFGAECRAIEAQGADWVHVDVMDGHFVPNLTFGPAMCAAIRPHIKG 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS +D++I A AG DIIT H E+ PHI R+L+ I G K GV++NP T +
Sbjct: 65 VMDVHLMISPVDAYIEAFAKAGSDIITAHLEAGPHIHRTLQAIRGAGAKAGVSLNPGTGL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ++D +DM+L+MTVNPGFGGQ+ I S + K+R+ + +IG R I +++DGG+T
Sbjct: 125 EDMPYLLDMVDMVLVMTVNPGFGGQKFIHSQVDKVRRLREMIGDRPIHIQIDGGITPETA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
+ AGAD+LV GS+ F + G +S
Sbjct: 185 PLVAAAGADVLVAGSAVF-KGGSVS 208
>gi|332139915|ref|YP_004425653.1| ribulose-phosphate 3-epimerase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549937|gb|AEA96655.1| ribulose-phosphate 3-epimerase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 225
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 138/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE++ N+ KAGA +HFDVMD +VPN++FG + +LR+Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDVDNVLKAGADVVHFDVMDNHYVPNLTFGPMICEALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I ADAG I+FHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDDLIEKFADAGASYISFHPEASDHIDRSLQLIIDAGCKPGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGG 177
TP+ L+ V+D++ ILIM+VNPGFGGQ+ I ST+ K+R K L I +E+DGG
Sbjct: 120 ATPLHYLDHVMDKLHHILIMSVNPGFGGQKFIPSTLDKVRAVKQRVLESGYDIRIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F+Q
Sbjct: 180 VKVDNIRDIAEAGADMFVAGSAIFSQ 205
>gi|322412719|gb|EFY03627.1| ribulose-phosphate 3-epimerase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 220
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 138/216 (63%), Gaps = 10/216 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 TLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP TP+
Sbjct: 63 VFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGG 177
LE ++D +D +LIMTVNPGFGGQ I +T+ K R K L + +EVDGG
Sbjct: 123 TALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATLAKWRDEKGL----AFDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V ++ I++ +AGA++ V GS F +S + L
Sbjct: 179 VDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTL 214
>gi|227112147|ref|ZP_03825803.1| ribulose-phosphate 3-epimerase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 225
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 139/206 (67%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTANVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI ++ +AGAD+ V GS+ F
Sbjct: 180 VKVDNIGAIAEAGADMFVAGSAIFGH 205
>gi|261823286|ref|YP_003261392.1| ribulose-phosphate 3-epimerase [Pectobacterium wasabiae WPP163]
gi|261607299|gb|ACX89785.1| ribulose-phosphate 3-epimerase [Pectobacterium wasabiae WPP163]
Length = 225
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 139/206 (67%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTANVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI ++ +AGAD+ V GS+ F
Sbjct: 180 VKVDNIGAIAEAGADMFVAGSAIFGH 205
>gi|161526027|ref|YP_001581039.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans ATCC
17616]
gi|189349256|ref|YP_001944884.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans ATCC
17616]
gi|221201752|ref|ZP_03574790.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD2M]
gi|221207173|ref|ZP_03580183.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD2]
gi|221213302|ref|ZP_03586277.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD1]
gi|160343456|gb|ABX16542.1| Ribulose-phosphate 3-epimerase [Burkholderia multivorans ATCC
17616]
gi|189333278|dbj|BAG42348.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans ATCC
17616]
gi|221166754|gb|EED99225.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD1]
gi|221172761|gb|EEE05198.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD2]
gi|221178568|gb|EEE10977.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD2M]
Length = 228
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 142/227 (62%), Gaps = 9/227 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLTLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDYVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V + NI + AGAD V GS+ F G+ Y K +++++ + A++
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRKVIDEMRAALAAVE 226
>gi|328954550|ref|YP_004371884.1| ribulose-phosphate 3-epimerase [Desulfobacca acetoxidans DSM 11109]
gi|328454874|gb|AEB10703.1| ribulose-phosphate 3-epimerase [Desulfobacca acetoxidans DSM 11109]
Length = 231
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 145/223 (65%), Gaps = 5/223 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFS LG+E+ + +AGA IH DVMDG FVPNI+ G VI++LR +D FD
Sbjct: 4 IAPSILSADFSCLGKEVRAVVEAGADWIHIDVMDGHFVPNITIGPPVIKALRKITDLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ + +I +AG +II+ H E+S H+ R+L I +G K GV +NP TP+ +
Sbjct: 64 VHLMIAQPEGYIADFVEAGANIISVHVEASTHLHRTLTEIRRLGCKPGVVLNPATPLETI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
V++E+DM+L+MTVNPGFGGQ+ I + PKI + + +I + + +++EVDGG I
Sbjct: 124 TYVLEEVDMVLLMTVNPGFGGQEFINAVSPKIEKLREIIDRLNLPVAIEVDGGANLETIA 183
Query: 185 SLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSALAID 224
+ +AGAD+ V GS+ FNQ K IS + + D + +D
Sbjct: 184 IMARAGADIFVAGSAIFNQPDYKAAISRLRTVVDRAQGERTVD 226
>gi|260588068|ref|ZP_05853981.1| ribulose-phosphate 3-epimerase [Blautia hansenii DSM 20583]
gi|331082363|ref|ZP_08331489.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541595|gb|EEX22164.1| ribulose-phosphate 3-epimerase [Blautia hansenii DSM 20583]
gi|330400849|gb|EGG80450.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
6_1_63FAA]
Length = 218
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 136/198 (68%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+ PSILAADFS LGEEI+ + +AGA+ +H D+MDG FVP+IS G VI S+R +D F
Sbjct: 4 QLSPSILAADFSNLGEEITKVERAGARWLHIDIMDGQFVPSISMGIPVISSIRKRTDLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M + I A AG D+IT H E+ P++ R+LR I G K GVAINP T V +
Sbjct: 64 DVHIMALDPTALIEDFAKAGADLITVHVEACPNLDRTLRLIREKGCKVGVAINPATSVHV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
LE+V++ +DM+LIMTVNPGFGGQ I K+RQ + + +R+++L EVDGG+ I
Sbjct: 124 LENVLEIVDMVLIMTVNPGFGGQAYIPYCANKVRQIREMAKERNLTLDIEVDGGINKNTI 183
Query: 184 KSLVQAGADLLVVGSSFF 201
+ +V AGA+++V GS+ F
Sbjct: 184 QEVVDAGANIIVAGSAVF 201
>gi|292670247|ref|ZP_06603673.1| ribulose-phosphate 3-epimerase [Selenomonas noxia ATCC 43541]
gi|292648199|gb|EFF66171.1| ribulose-phosphate 3-epimerase [Selenomonas noxia ATCC 43541]
Length = 237
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 3/201 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+I I PSIL+ADF+ LG ++ + +AGA+ IH DVMDG FVPNI+ G V+ SLR S
Sbjct: 24 PTI-IAPSILSADFANLGADVRRVEEAGAEYIHIDVMDGTFVPNITLGPCVVESLRKVSK 82
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+VFD HLM+ ++HI A AG DIITFH E++ H R ++ I A G K G+A+NP T
Sbjct: 83 AVFDVHLMVEHPETHIEPFAKAGADIITFHVEATRHAHRVIQQIKAAGCKAGIALNPGTS 142
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
+ LE++ID+ DM+L+MTVNPGFGGQ+ IE+T+ KI I I +EVDGG+ +
Sbjct: 143 IYTLEELIDDADMVLLMTVNPGFGGQKFIENTVGKIHALYHTIADNELDIDIEVDGGINA 202
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
+S+ AGA++LV GS +
Sbjct: 203 ETAESVRSAGANVLVAGSYIY 223
>gi|90580853|ref|ZP_01236655.1| ribulose-phosphate 3-epimerase [Vibrio angustum S14]
gi|90437924|gb|EAS63113.1| ribulose-phosphate 3-epimerase [Vibrio angustum S14]
Length = 224
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA IHFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVDKVLAAGADVIHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGATMITFHVEASDHVDRTLQLIKEHGCKAGVVFNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I ST+ K+R+ + I R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDMILLMSVNPGFGGQSFIPSTLDKLREVRKRIDASGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ FN+
Sbjct: 186 REIAAAGADMFVAGSAIFNE 205
>gi|119474848|ref|ZP_01615201.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2143]
gi|119451051|gb|EAW32284.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2143]
Length = 225
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ + AGA IHFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEEVDAVLNAGADIIHFDVMDNHYVPNLTIGPMVCKALRDYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D+ I ADAG ITFHP+++ H+ RSL I G K G+ +NP V
Sbjct: 66 DVHLMVSPVDALIADFADAGASYITFHPDATTHLDRSLAMIRDAGCKAGLVLNPAMGVES 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I T+ K+R+ + LI I LEVDGGVT+ NI
Sbjct: 126 LKYVMDKLDMILLMSVNPGFGGQAFIPGTLDKLREVRQLIDASGFDIRLEVDGGVTADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD V GS+ +N+ Y + +N ++
Sbjct: 186 RDIAEAGADTFVAGSAIYNKP---DYKEAINAMR 216
>gi|332994696|gb|AEF04751.1| ribulose-phosphate 3-epimerase [Alteromonas sp. SN2]
Length = 225
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 143/220 (65%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++FG + +LR Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEEVENVLSAGADVVHFDVMDNHYVPNLTFGPMICEALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I ADAG I+FHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDDLIEKFADAGASYISFHPEASEHIDRSLQLIIDAGCKPGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGG 177
TP+ L+ V+D++ ILIM+VNPGFGGQ+ I ST+ K+R K L I +E+DGG
Sbjct: 120 ATPLHYLDHVMDKLHHILIMSVNPGFGGQKFIPSTLDKVRAVKQRVLESGHDIRIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI+++ +AGAD+ V GS+ F+ E Y ++D++
Sbjct: 180 VKVDNIRAIAEAGADMFVAGSAIFS---EPDYRAVIDDMR 216
>gi|295706325|ref|YP_003599400.1| ribulose-phosphate 3-epimerase [Bacillus megaterium DSM 319]
gi|294803984|gb|ADF41050.1| ribulose-phosphate 3-epimerase [Bacillus megaterium DSM 319]
Length = 218
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 136/201 (67%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+FS+L EEI + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 3 KIAPSILSANFSKLAEEIREVEAGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D ++ + A AG DI+T H E+ H+ R+++ I G K GVA+NP TP+ +
Sbjct: 63 DVHLMIENPDQYVPMFAKAGADILTVHAEACTHLHRTIQLIKEHGMKAGVALNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ ++++ID+IL+MTVNPGFGGQ I + +PKI Q LI R SI +EVDGG+
Sbjct: 123 VKHILEDIDLILLMTVNPGFGGQNFIPNVLPKIEQISQLIEIRHLSIEVEVDGGINEETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ V+AGA++LV GS+ +NQ+
Sbjct: 183 RKCVEAGANVLVAGSAIYNQE 203
>gi|126664686|ref|ZP_01735670.1| ribulose-phosphate 3-epimerase [Marinobacter sp. ELB17]
gi|126631012|gb|EBA01626.1| ribulose-phosphate 3-epimerase [Marinobacter sp. ELB17]
Length = 228
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 137/205 (66%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNPYL-IAPSILSADFARLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCEALRKH 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I DAG ITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDDLIRKFMDAGASYITFHPEASQHVDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
T + ++ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ I +I LE+DGG
Sbjct: 120 ATSLQYMDYVMDKLDMVLVMSVNPGFGGQKFIPGTLDKLREARKRIDASDYNIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V + NI+ + +AGAD V GS+ FN
Sbjct: 180 VKTDNIREIAEAGADTFVAGSAIFN 204
>gi|315497068|ref|YP_004085872.1| ribulose-phosphate 3-epimerase [Asticcacaulis excentricus CB 48]
gi|315415080|gb|ADU11721.1| ribulose-phosphate 3-epimerase [Asticcacaulis excentricus CB 48]
Length = 219
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 144/214 (67%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEE+ I AGA IH DVMDG FVPN++ G DV++SLR ++ FD
Sbjct: 6 ICPSILASDFSKLGEEVRAIDAAGADWIHIDVMDGHFVPNLTIGPDVVKSLRPHTQKTFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D ++ AG D ++ HPES PH+ R+L+ I +G K GV +NP TP+ L
Sbjct: 66 VHLMVTPVDPYLEAFRAAGADYMSVHPESGPHLHRTLKQIRHLGAKAGVVLNPATPLDGL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSRNI 183
E ++D++D+IL+M+VNPGFGGQ IES + KI R+ +G ++ L+VDGGV +N
Sbjct: 126 EWIMDDLDLILLMSVNPGFGGQSFIESQLRKIEAVRKKLDALGHPAV-LQVDGGVNLQNA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ V AGA LV G++ F + G +YA + LK
Sbjct: 185 AACVAAGATALVAGTAVF-KGGPDAYAANIKSLK 217
>gi|146299192|ref|YP_001193783.1| ribulose-phosphate 3-epimerase [Flavobacterium johnsoniae UW101]
gi|146153610|gb|ABQ04464.1| Ribulose-phosphate 3-epimerase [Flavobacterium johnsoniae UW101]
Length = 220
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 140/213 (65%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF L ++ I + A H D+MDG FVPNISFG V+ ++ ++ D
Sbjct: 6 IAPSVLAADFGNLQRDVEMINNSQADWFHIDIMDGVFVPNISFGMPVLEAISKHAKKYID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I AD G + +T H E+ H+ R+L+ I A G K GVAINP T + +L
Sbjct: 66 VHLMIIDPDRYIKTFADLGANGLTVHYEACTHLHRTLQAIKAEGMKAGVAINPHTNIDLL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
EDVI++ID++ IM+VNPGFGGQ IE+T K+++ K LI +++ S +E+DGGVT++N K
Sbjct: 126 EDVINDIDLVCIMSVNPGFGGQSFIENTYAKVKKLKDLITRKNASTLIEIDGGVTNKNAK 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
LV+AGAD+LV GS F + I + + DLK
Sbjct: 186 QLVEAGADVLVAGSFVFKAENPI---ETIADLK 215
>gi|15615065|ref|NP_243368.1| ribulose-phosphate 3-epimerase [Bacillus halodurans C-125]
gi|10175122|dbj|BAB06221.1| ribulose-phosphate 3-epimerase [Bacillus halodurans C-125]
Length = 216
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 136/202 (67%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG EI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFANLGNEIQDVERGGADYIHVDVMDGHFVPNITIGPLIVDAIRPVTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DIIT H E+ PH+ R+L I G K GV +NP TPV+
Sbjct: 62 LDVHLMIEQPDGYIPAFAKAGADIITVHVEACPHLHRTLHLIKESGVKAGVVLNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ V+ ++DM+L MTVNPGFGGQ+ I S +PK+++ +L ++ ++ +EVDGGV
Sbjct: 122 SIQHVLSDVDMVLFMTVNPGFGGQRFIPSVLPKLKELASLKKEQGLTFEIEVDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
K V+AGA++LV GS+ FN++
Sbjct: 182 AKQCVEAGANVLVAGSAVFNEE 203
>gi|89075213|ref|ZP_01161644.1| putative ribulose-phosphate 3-epimerase [Photobacterium sp. SKA34]
gi|89049035|gb|EAR54602.1| putative ribulose-phosphate 3-epimerase [Photobacterium sp. SKA34]
Length = 224
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA IHFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVDKVLAAGADVIHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGATMITFHVEASDHVDRTLQLIKENGCKAGVVFNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I ST+ K+R+ + I R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDMILLMSVNPGFGGQSFIPSTLDKLREVRKRIDASGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ FN+
Sbjct: 186 REIAAAGADMFVAGSAIFNE 205
>gi|261867075|ref|YP_003254997.1| ribulose-phosphate 3-epimerase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412407|gb|ACX81778.1| ribulose-phosphate 3-epimerase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 224
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 145/222 (65%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ + K G IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVEKVLKCGGDVIHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S HI R+L+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGASYITFHPEASEHIDRTLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++QA+ I I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKVDIILLMSVNPGFGGQSFIPATLDKLKQARKRIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI + +AGAD+ V GS+ F+Q Y K ++++++
Sbjct: 180 VKVSNIAEVARAGADMFVAGSAIFDQP---DYQKVIDEMRQQ 218
>gi|119502713|ref|ZP_01624798.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2080]
gi|119461059|gb|EAW42149.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2080]
Length = 224
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 145/217 (66%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-S 63
+I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V ++LR++ +
Sbjct: 4 FKIAPSILSADFARLGEEVDTVLAAGADIVHFDVMDNHYVPNLTIGPMVCQALRNHGVVA 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I++ ADAG ITFHP++S H+ RSL+ I G K+G+ NP +
Sbjct: 64 PIDVHLMVQPVDNLISMFADAGATYITFHPDASTHVDRSLQLIRGAGCKSGLVFNPAASL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
L+ V+D++DMIL+M+VNPGFGGQ+ I +T+ K+R+ +ALI I LEVDGGV
Sbjct: 124 EALKYVMDKVDMILLMSVNPGFGGQKFIPATLDKLREVRALIDASGLDIRLEVDGGVGPG 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
NI + AGAD V GS+ FNQ Y ++++++
Sbjct: 184 NIAEIAAAGADTFVAGSAIFNQP---DYRAVIDEMRR 217
>gi|110834903|ref|YP_693762.1| ribulose-phosphate 3-epimerase [Alcanivorax borkumensis SK2]
gi|110648014|emb|CAL17490.1| ribulose-phosphate 3-epimerase [Alcanivorax borkumensis SK2]
Length = 224
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 140/212 (66%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSILAA+F+RLGEE + AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 8 IAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I++ A+AG ITFHPE+S H+ RSL+ I + G K G+ +NP T
Sbjct: 68 DVHLMVSPVDELISMFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLNPATRPDC 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
LE V+D++DMIL+M+VNPG+GGQ I ST+ K R + LI I LEVDGGV+ +NI
Sbjct: 128 LEYVMDKLDMILLMSVNPGYGGQTFIPSTLDKTRAVRQLIDASGYDIRLEVDGGVSEKNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + AGAD V GS+ F ++ + +++ D
Sbjct: 188 REVAAAGADTFVAGSAIFGKENYAAVIQQMRD 219
>gi|213963426|ref|ZP_03391681.1| ribulose-phosphate 3-epimerase [Capnocytophaga sputigena Capno]
gi|213953946|gb|EEB65273.1| ribulose-phosphate 3-epimerase [Capnocytophaga sputigena Capno]
Length = 214
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 133/198 (67%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L + I + + A H D+MDG FVPNIS+G V+ ++ ++ D
Sbjct: 3 LAPSLLAADFGNLQQAIEMVNASEADWFHIDIMDGVFVPNISYGMPVLSVIQKHATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I+ A G DI+T H E+ H+ R+L+ I A K GVA+NP TPV++L
Sbjct: 63 VHLMIVDPSRYISTFAKLGSDILTVHYEACTHLHRTLQAIKAENMKAGVALNPHTPVSVL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++D++L+M+VNPGFGGQ IE+T K+RQAK LI + S +E+DGGV+ +N K
Sbjct: 123 EDIIQDVDVLLLMSVNPGFGGQSFIENTYKKVRQAKTLIEQSGASTLIEIDGGVSLKNAK 182
Query: 185 SLVQAGADLLVVGSSFFN 202
+LV+AGAD LV GS FN
Sbjct: 183 ALVEAGADALVAGSFVFN 200
>gi|293603055|ref|ZP_06685490.1| ribulose-phosphate 3-epimerase [Achromobacter piechaudii ATCC
43553]
gi|292818550|gb|EFF77596.1| ribulose-phosphate 3-epimerase [Achromobacter piechaudii ATCC
43553]
Length = 242
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 143/223 (64%), Gaps = 9/223 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S +I PSIL+ADF+RLGEE+ N+ AGA IH DVMD +VPN++ G V ++R +
Sbjct: 13 TASTRITPSILSADFARLGEEVRNVVAAGADWIHVDVMDNHYVPNLTIGPMVCAAIRPHV 72
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ +D + + A AG D I+FHP++S H+ R+L I G K G+ NP T
Sbjct: 73 QVPIDVHLMVEPVDDLVPMFAKAGADYISFHPDASRHVDRTLSLIRENGCKAGLVFNPAT 132
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVD 175
P++ L+ V+D+ID+ILIM+VNPGFGGQ I T+ K+R+A+A I G + I L+VD
Sbjct: 133 PLSYLDYVMDKIDLILIMSVNPGFGGQSFIPGTLTKLREARARIDAWTQAGGQEIVLQVD 192
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GGV NI + +AGAD V GS+ F G+ YA + +++
Sbjct: 193 GGVKIDNIAEIRRAGADTFVAGSAIF---GKPDYAGIIKSMRE 232
>gi|33152908|ref|NP_874261.1| D-ribulose-phosphate-3 epimerase [Haemophilus ducreyi 35000HP]
gi|33149133|gb|AAP96650.1| D-ribulose-phosphate-3 epimerase [Haemophilus ducreyi 35000HP]
Length = 224
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+AD +RLG++++ + AGA IHFDVMD FVPN++FG + ++LR+Y +
Sbjct: 8 IAPSILSADLARLGDDVNQVLTAGADIIHFDVMDNHFVPNLTFGPMICQALRNYGITAEI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ I A AG + ITFHPE++ HI R+L+ IH G K G+ NP TP+
Sbjct: 68 DVHLMVKPVERIIPDFAKAGANYITFHPEATDHIDRTLQLIHQYGCKAGLVFNPATPLHY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ VID+IDMIL+M VNPGFGGQ I ST+ K+R+ + I +SI LE+DGGV NI
Sbjct: 128 LDYVIDKIDMILLMGVNPGFGGQTFIPSTLTKLREVRQRIDASGKSIRLEIDGGVKIDNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ AGAD V GS+ F+Q+
Sbjct: 188 AEIAAAGADTFVAGSAIFDQQ 208
>gi|293391449|ref|ZP_06635783.1| ribulose-phosphate 3-epimerase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951983|gb|EFE02102.1| ribulose-phosphate 3-epimerase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 224
Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 145/222 (65%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ + K G IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVEKVLKCGGDVIHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S D HLM+ +D I A AG ITFHPE++ HI R+L+ I G K+G+ NP
Sbjct: 60 GISAPIDVHLMVKPVDRIIPDFAKAGASYITFHPEATEHIDRTLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++QA+ I I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKVDIILLMSVNPGFGGQSFIPATLDKLKQARKRIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI + +AGAD+ V GS+ F+Q Y K ++++++
Sbjct: 180 VKVSNIAEVARAGADMFVAGSAIFDQP---DYQKVIDEMRQQ 218
>gi|331091579|ref|ZP_08340415.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
2_1_46FAA]
gi|330403606|gb|EGG83162.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
2_1_46FAA]
Length = 220
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 148/214 (69%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF +LGEEI K+GA+ +HFDVMDG FVP+ISFG V++S++S ++ V D
Sbjct: 5 LAPSILAADFKKLGEEIQATEKSGAEYLHFDVMDGLFVPSISFGMPVLQSIKSCTNQVID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ ++ AG D+IT H E+ + ++L+ I G K G++I P+TPV+ L
Sbjct: 65 AHLMINEPIRYVEAFQKAGADLITVHLEACEDVHKTLQKIKECGMKAGISICPDTPVSAL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+ I+E DMILIM+V+PGFGGQ+ IE ++ KIR + ++ + + ++VDGG+ + N++
Sbjct: 125 EEYIEEADMILIMSVHPGFGGQKFIEDSLTKIRMTREMLNRYGLETDIQVDGGIYTSNVE 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++++AGA+++V GS+ F + + + + LKK
Sbjct: 185 NVLKAGANIIVAGSAVFKGDAKENTKEFMEILKK 218
>gi|303234002|ref|ZP_07320651.1| ribulose-phosphate 3-epimerase [Finegoldia magna BVS033A4]
gi|302494927|gb|EFL54684.1| ribulose-phosphate 3-epimerase [Finegoldia magna BVS033A4]
Length = 218
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 138/201 (68%), Gaps = 3/201 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVFDC 67
PS+LA +F L + + + G + +H DVMDG FVPNISFG +I+ +R Y + +FDC
Sbjct: 6 PSLLACNFFELEKNLDILKNKGIRYLHLDVMDGNFVPNISFGPAIIKQIREKYPEFIFDC 65
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLM++ ++ IN I DAG DIITFHPE++ H R ++T+H GKK G+A+NP T + +
Sbjct: 66 HLMVNKPENIINDILDAGADIITFHPEATFHPHRIIQTVHKAGKKCGLALNPSTGLESCK 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKS 185
+ID++D+IL+M+VNPGFGGQ IES K+ A+ +I K+ I LEVDGGV + NI
Sbjct: 126 YIIDDLDIILVMSVNPGFGGQSFIESQYLKLIDARNMIKASKKDIILEVDGGVKTSNIDK 185
Query: 186 LVQAGADLLVVGSSFFNQKGE 206
+++AGADL+V GS FN E
Sbjct: 186 VLEAGADLIVSGSDVFNHNIE 206
>gi|218246455|ref|YP_002371826.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 8801]
gi|257059498|ref|YP_003137386.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 8802]
gi|218166933|gb|ACK65670.1| Ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 8801]
gi|256589664|gb|ACV00551.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 8802]
Length = 234
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 145/222 (65%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I I PSIL+ADFSRLGEEI + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 5 TKPIVIAPSILSADFSRLGEEIQAVDKAGADWIHVDVMDGRFVPNITIGPLIVSAIRPYT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 65 QKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I + + KIR+ + + +R + +EVDGG
Sbjct: 125 STPLELIEYVLELCDLVLIMSVNPGFGGQSFIPAVVSKIRKLRQMCDERGLDPWIEVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ FN +YA+ + ++ S
Sbjct: 185 LKGGNTWQVLEAGANAIVAGSAVFNAP---NYAEAIEGIRNS 223
>gi|33594166|ref|NP_881810.1| ribulose-phosphate 3-epimerase [Bordetella pertussis Tohama I]
gi|33598644|ref|NP_886287.1| ribulose-phosphate 3-epimerase [Bordetella parapertussis 12822]
gi|33603596|ref|NP_891156.1| ribulose-phosphate 3-epimerase [Bordetella bronchiseptica RB50]
gi|33564241|emb|CAE43532.1| ribulose-phosphate 3-epimerase [Bordetella pertussis Tohama I]
gi|33574773|emb|CAE39433.1| ribulose-phosphate 3-epimerase [Bordetella parapertussis]
gi|33577721|emb|CAE34986.1| ribulose-phosphate 3-epimerase [Bordetella bronchiseptica RB50]
gi|332383581|gb|AEE68428.1| ribulose-phosphate 3-epimerase [Bordetella pertussis CS]
Length = 245
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 141/220 (64%), Gaps = 9/220 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 18 STRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPHVQV 77
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++ITFHPE+S H+ R+L I G K G+ NP TP+
Sbjct: 78 PIDVHLMVEPVDEIVPQFAKAGANVITFHPEASRHVDRTLALIRDHGCKAGLVFNPATPL 137
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
++ V+D++D++L+M+VNPGFGGQ I +T+ K+R A+A I G + I LEVDGG
Sbjct: 138 HYMDYVMDKLDVVLLMSVNPGFGGQAFIPATLAKLRDARARIDRWRAAGGQPILLEVDGG 197
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD V GS+ F G+ YA+ + L+
Sbjct: 198 VKVDNIAEIRAAGADTFVAGSAIF---GKPDYAQVIGQLR 234
>gi|269961471|ref|ZP_06175835.1| Ribulose-phosphate 3-epimerase [Vibrio harveyi 1DA3]
gi|269833848|gb|EEZ87943.1| Ribulose-phosphate 3-epimerase [Vibrio harveyi 1DA3]
Length = 223
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 143/214 (66%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV NI
Sbjct: 126 LEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD+ V GS+ F G Y + ++ ++
Sbjct: 186 REIAEAGADMFVAGSAIF---GHPDYKQVIDQMR 216
>gi|302035778|ref|YP_003796100.1| d-ribulose-5-phosphate 3-epimerase [Candidatus Nitrospira defluvii]
gi|300603842|emb|CBK40174.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Nitrospira defluvii]
Length = 234
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 141/202 (69%), Gaps = 4/202 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+ADF+RL EE++ + AGA +H DVMDG FVPN++ G ++ +LR +
Sbjct: 5 TVRIAPSILSADFARLAEEVARVEDAGADWLHIDVMDGHFVPNLTVGPPIVEALRKVTTL 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+++ D+ I A+AG D +T H E+ PH+ R++++I G K GV +NP TP
Sbjct: 65 PLDVHLMMTNPDAFIGEFAEAGADYLTVHVETCPHLHRTVQSIKERGVKAGVTLNPATPA 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTS 180
L +++ + D+ILIM+VNPGFGGQ+ I S++ KI + +ALI G R++ LEVDGGV
Sbjct: 125 GTLSEIVRDADLILIMSVNPGFGGQKFIASSLHKIAEVRALIDRSGSRAL-LEVDGGVKP 183
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
N+K ++ AGA++LV GS+ F+
Sbjct: 184 DNVKEILAAGAEVLVAGSAVFS 205
>gi|255657710|ref|ZP_05403119.1| ribulose-phosphate 3-epimerase [Mitsuokella multacida DSM 20544]
gi|260849898|gb|EEX69905.1| ribulose-phosphate 3-epimerase [Mitsuokella multacida DSM 20544]
Length = 214
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ L +E+ +T AGA IH DVMDG +VPNI+ G+ V++SLR S V
Sbjct: 2 IKIAPSILSADFAHLADEVKRVTDAGADYIHIDVMDGTYVPNITLGSPVVKSLRKASKGV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ ++ I A+AG DIITFH E++ H R ++ I A G K G+A+NP T +A
Sbjct: 62 FDVHLMVEHPETQIEAFAEAGADIITFHIEAAKHSHRIVQQIKAAGCKAGIALNPGTSLA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E+++ ++DM+LIMTVNPGFGGQ+ IES + KI + I +EVDGG+
Sbjct: 122 MIEELLQDLDMVLIMTVNPGFGGQKFIESQLEKIHMLRHTIQDMGFDCDIEVDGGINEET 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
+ + QAGA++LV GS+ +
Sbjct: 182 SRLVRQAGANVLVAGSAIY 200
>gi|81299415|ref|YP_399623.1| ribulose-phosphate 3-epimerase [Synechococcus elongatus PCC 7942]
gi|81168296|gb|ABB56636.1| ribulose-5-phosphate 3-epimerase [Synechococcus elongatus PCC 7942]
Length = 247
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 143/218 (65%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADFSRLG+++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 25 SVVIAPSILSADFSRLGDDVRAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTQK 84
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK+ GV +NP TPV
Sbjct: 85 PLDVHLMIVEPEKYVPDFAKAGADIISVQAEACPHLHRNLAQIKDLGKQAGVVLNPSTPV 144
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
LE V++ D+ILIM+VNPGFGGQ I + +PKIR+ +A+ +R + +EVDGG+ +
Sbjct: 145 ETLEYVLELCDLILIMSVNPGFGGQSFIPAVLPKIRKLRAMCDERGLDPWIEVDGGLKAN 204
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN YA+ + ++ S
Sbjct: 205 NTWQVLEAGANAIVAGSAVFNAP---DYAEAIAAIRNS 239
>gi|229822827|ref|ZP_04448897.1| hypothetical protein GCWU000282_00116 [Catonella morbi ATCC 51271]
gi|229787640|gb|EEP23754.1| hypothetical protein GCWU000282_00116 [Catonella morbi ATCC 51271]
Length = 215
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 139/214 (64%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PS+L+ADF+ L + I + +AGA +H D+MDG FVPNISFG + + LR+ S V
Sbjct: 1 MYIAPSMLSADFNNLAQSIRMVEEAGADYLHIDIMDGDFVPNISFGPMLYQGLRAQSKLV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+++ + +++ + AG D++T H E++PHI R+L+ I A G K GV INP T VA
Sbjct: 61 FDVHMMVTNPERYVDQVVKAGADVVTVHVEATPHIHRALQLIKAAGAKAGVVINPGTSVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V+ ++D +L+MTVNPGFGGQ I +T+ K+RQ L K+ S +EVDGGV +
Sbjct: 121 AIEAVLGQVDQVLVMTVNPGFGGQAFIPATLDKVRQLADLRQKQGYSYLIEVDGGVNDKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ AGAD+LV GS F + + L DL
Sbjct: 181 AADCLAAGADILVAGSYVFGHSDPVQAIQTLKDL 214
>gi|16124356|ref|NP_418920.1| ribulose-phosphate 3-epimerase [Caulobacter crescentus CB15]
gi|221233039|ref|YP_002515475.1| ribulose-phosphate 3-epimerase [Caulobacter crescentus NA1000]
gi|13421204|gb|AAK22088.1| ribulose-phosphate 3-epimerase [Caulobacter crescentus CB15]
gi|220962211|gb|ACL93567.1| ribulose-phosphate 3-epimerase [Caulobacter crescentus NA1000]
Length = 226
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 141/219 (64%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSILA+DF++LGEE++ I AGA +H DVMDG FVPNI+ G D+++++R +
Sbjct: 8 MTAPI-IAPSILASDFAKLGEEVAAIEAAGADWVHVDVMDGHFVPNITLGPDIVKAIRPH 66
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS D ++ AG D+I+ HPE+ PH+ RSL+ I +G K GV NP
Sbjct: 67 AKIPFDVHLMISPADPYLEAFRAAGADLISIHPEAGPHLHRSLKRIRELGAKAGVVFNPS 126
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + +E +++++D++L+M+VNPGFGGQ I + K+ + ++ K + +EVDGGV
Sbjct: 127 TGIDHVEWILEDVDLLLVMSVNPGFGGQSFIPGQLRKVEALRKMVDKAGLDIIIEVDGGV 186
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
T V AGA LV GS+ F + G +YA + LK
Sbjct: 187 TPVTAPQCVAAGATALVAGSAVF-KGGPAAYADNIRALK 224
>gi|212634890|ref|YP_002311415.1| Ribulose-phosphate 3-epimerase [Shewanella piezotolerans WP3]
gi|212556374|gb|ACJ28828.1| Ribulose-phosphate 3-epimerase [Shewanella piezotolerans WP3]
Length = 224
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 136/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRLIPDFAKAGASIITFHPEASEHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI I LEVDGG
Sbjct: 120 GTPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRKLIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ FN+
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNK 205
>gi|152980493|ref|YP_001351927.1| D-ribulose-5-phosphate 3-epimerase [Janthinobacterium sp.
Marseille]
gi|151280570|gb|ABR88980.1| D-ribulose-5-phosphate 3-epimerase [Janthinobacterium sp.
Marseille]
Length = 221
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 144/222 (64%), Gaps = 6/222 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 2 PNYRIAPSILSADFARLGEEVCNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHVQ 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D I A AG +IITFHPE+S HI R+L+ I G K G+ NP TP
Sbjct: 62 VPIDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRTLQLIRDNGCKAGLVFNPATP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ LE V+D++D+IL+M+VNPGFGGQ I T+ KI + +I + R I LEVDGG+
Sbjct: 122 LNHLEHVMDKLDIILMMSVNPGFGGQSFIPHTLKKIAAVRKMIDESGRDIMLEVDGGIKI 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
NI++ +AGAD V GS+ F G+ Y K + D +S LA
Sbjct: 182 DNIEAAARAGADTFVAGSAIF---GKPDY-KAVIDAMRSELA 219
>gi|259910036|ref|YP_002650392.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Erwinia pyrifoliae Ep1/96]
gi|224965658|emb|CAX57190.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Erwinia pyrifoliae Ep1/96]
gi|310765638|gb|ADP10588.1| D-ribulose-5-phosphate 3-epimerase [Erwinia sp. Ejp617]
Length = 228
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ +NP TP++I
Sbjct: 66 DVHLMVKPVDRLVPDFAKAGASYITFHPEASEHVDRTLQLIREHGCKAGLVLNPATPLSI 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+ILIM+VNPGFGGQ I T+ K+RQ + LI + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILIMSVNPGFGGQSFIPGTLNKLRQVRKLIDQSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G Y K ++D++
Sbjct: 186 GEIAAAGADMFVAGSAIF---GHPDYKKVIDDMR 216
>gi|298491883|ref|YP_003722060.1| ribulose-phosphate 3-epimerase ['Nostoc azollae' 0708]
gi|298233801|gb|ADI64937.1| ribulose-phosphate 3-epimerase ['Nostoc azollae' 0708]
Length = 235
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 146/219 (66%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFSRLG++I + KAGA IH DVMDG FVPNI+ G+ V+ ++R +
Sbjct: 10 IVISPSILSADFSRLGDDIRAVDKAGADWIHVDVMDGRFVPNITIGSLVVEAIRPITTKP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP TP
Sbjct: 70 LDVHLMIVEPEKYVEGFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNPGTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++E V++ D++LIM+VNPGFGGQ I S +PKIRQ + + +R + +EVDGG+ +
Sbjct: 130 LELIEYVLELCDLVLIMSVNPGFGGQSFIPSVVPKIRQLRQMCDERGLDPWIEVDGGLKA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN YA+ + +++ S
Sbjct: 190 NNTWQVLEAGANAIVAGSAVFNAP---DYAEAIKNIRNS 225
>gi|145298157|ref|YP_001140998.1| ribulose-phosphate 3-epimerase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850929|gb|ABO89250.1| ribulose-phosphate 3-epimerase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 224
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 147/219 (67%), Gaps = 13/219 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG++++ + AGA +HFDVMD +VPN++ G V ++LR Y ++
Sbjct: 6 IAPSILSADFARLGDDVARVLTAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYGIKALI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ++ITFHPE+S H+ R+L I G + G+ +NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGANLITFHPEASDHVDRTLGLIKEQGCQAGLVLNPATSLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + R I LE+DGGV NI
Sbjct: 126 LEYVMDKLDVILLMSVNPGFGGQSFIPGTLDKLRQVRRLIDESGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ----------KGEISYAKR 212
+++ +AGAD+ V GS+ F+Q + E+S+ +R
Sbjct: 186 RAIAEAGADMFVAGSAIFSQPDYKAVIDQMRAELSHVQR 224
>gi|22127808|ref|NP_671231.1| ribulose-phosphate 3-epimerase [Yersinia pestis KIM 10]
gi|45440019|ref|NP_991558.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Microtus
str. 91001]
gi|165928023|ref|ZP_02223855.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936169|ref|ZP_02224738.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. IP275]
gi|167399079|ref|ZP_02304603.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419005|ref|ZP_02310758.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|21960939|gb|AAM87482.1|AE013998_6 D-ribulose-5-phosphate 3-epimerase [Yersinia pestis KIM 10]
gi|45434874|gb|AAS60435.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Microtus
str. 91001]
gi|165915783|gb|EDR34391.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165919972|gb|EDR37273.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|166962999|gb|EDR59020.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051583|gb|EDR62991.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
UG05-0454]
Length = 229
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 10 IAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 70 DVHLMVKPVDRIVPDFAKAGATYITFHPEASEHVDRTLQLIKESGCKAGLVFNPATPLSY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 130 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVENI 189
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ FNQ
Sbjct: 190 RQIAAAGADMFVAGSAIFNQ 209
>gi|325954753|ref|YP_004238413.1| ribulose-phosphate 3-epimerase [Weeksella virosa DSM 16922]
gi|323437371|gb|ADX67835.1| ribulose-phosphate 3-epimerase [Weeksella virosa DSM 16922]
Length = 215
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 135/209 (64%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DF+ LG++I + + A+ H DVMDG FVPNIS+G +I + ++ V D
Sbjct: 4 IAPSILASDFAHLGKDIEMVNNSQAQWFHLDVMDGVFVPNISYGMPIIDRINQLTNKVLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I + G DI+T H E+S H+ R+++ I G K GVA+NP TPV+++
Sbjct: 64 VHLMIVEPERYITAFREVGADILTVHYEASTHLHRTIQAIKVEGMKAGVALNPHTPVSVV 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
ED+I+E+D++L+M+VNPGFGGQ+ IE+T KI + + + + L EVDGGV + N
Sbjct: 124 EDIIEELDLVLVMSVNPGFGGQKFIENTYRKIEKLAEMKKEYNPGLIIEVDGGVNTDNAP 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
L AGAD LV GS+ FN + Y L
Sbjct: 184 KLTAAGADALVAGSAVFNAENPTEYIAEL 212
>gi|261405805|ref|YP_003242046.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. Y412MC10]
gi|261282268|gb|ACX64239.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. Y412MC10]
Length = 219
Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 138/214 (64%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LG+EI +GA IH DVMDG FVPNI+ G +++++R ++
Sbjct: 2 IKIAPSILSADFAKLGQEIKEAEASGADWIHVDVMDGHFVPNITLGPPIVQAIRPHTGLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG D+IT H E+ PH+ R + I G K GVAINP TP
Sbjct: 62 LDVHLMIEQPELYIADFVKAGADLITVHAETCPHLHRVIHLIKEHGVKAGVAINPATPAH 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVTSR 181
+L++V+ ++D++L+MTVNPGFGGQ IE T+ KI Q + I +I +EVDGG+T+
Sbjct: 122 VLQEVLPDVDLVLVMTVNPGFGGQAFIERTVNKIAQLREWISNSDNPNIHIEVDGGITAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+V+AGAD+LV GS+ F + + ++ D
Sbjct: 182 TAPLVVEAGADVLVAGSAVFGKPDRAAAIAQIRD 215
>gi|325103737|ref|YP_004273391.1| ribulose-phosphate 3-epimerase [Pedobacter saltans DSM 12145]
gi|324972585|gb|ADY51569.1| ribulose-phosphate 3-epimerase [Pedobacter saltans DSM 12145]
Length = 223
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 141/197 (71%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L E+I + + A IH DVMDG FVPNISFG V+ ++++Y+ D
Sbjct: 5 IAPSILSADFANLKEDILMLNNSEADWIHVDVMDGLFVPNISFGFPVMAAVKNYALKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ AG ++IT H E+ H+ R++ I +G K GVA+NP TPV++L
Sbjct: 65 VHLMIVDPDRYLEAFKTAGANVITVHYEACTHLDRTVHKIKELGCKAGVALNPHTPVSLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
E+VI+EIDM+LIM+VNPGFGGQ+ I++T KI++ +A+ +++ SL EVDGGV+S N
Sbjct: 125 ENVIEEIDMVLIMSVNPGFGGQKFIQNTYNKIQELRAMANEKNPSLLIEVDGGVSSHNSL 184
Query: 185 SLVQAGADLLVVGSSFF 201
+L++AGA++LV G++ F
Sbjct: 185 ALLKAGANVLVAGNAIF 201
>gi|170076952|ref|YP_001733590.1| ribulose-phosphate 3-epimerase [Synechococcus sp. PCC 7002]
gi|169884621|gb|ACA98334.1| ribulose-phosphate 3-epimerase [Synechococcus sp. PCC 7002]
Length = 229
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 143/219 (65%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 6 IVVSPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEAIRPYTKKP 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GKK+GV +NP TP
Sbjct: 66 LDVHLMIVEPEKYVANFAKAGADIISVHAEHNASPHLHRTLCQIRELGKKSGVVLNPSTP 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ I+E V+D D+ILIM+VNPGFGGQ I S + KI + +A+ +R + +EVDGG+
Sbjct: 126 LDIIEHVLDVCDLILIMSVNPGFGGQSFIPSMVNKIEKLRAMCDERGLDPWIEVDGGIKP 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N ++ AGA+ +V GS+ F SYA+ + ++ S
Sbjct: 186 ANAWQVIDAGANAIVAGSAVFKAP---SYAEAIEGIRNS 221
>gi|51598036|ref|YP_072227.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis IP
32953]
gi|108809305|ref|YP_653221.1| ribulose-phosphate 3-epimerase [Yersinia pestis Antiqua]
gi|108814070|ref|YP_649837.1| ribulose-phosphate 3-epimerase [Yersinia pestis Nepal516]
gi|145597405|ref|YP_001161480.1| ribulose-phosphate 3-epimerase [Yersinia pestis Pestoides F]
gi|150260837|ref|ZP_01917565.1| ribulose-phosphate 3-epimerase [Yersinia pestis CA88-4125]
gi|153950747|ref|YP_001402910.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis IP
31758]
gi|162419892|ref|YP_001608039.1| ribulose-phosphate 3-epimerase [Yersinia pestis Angola]
gi|166010606|ref|ZP_02231504.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213375|ref|ZP_02239410.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167425716|ref|ZP_02317469.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167468239|ref|ZP_02332943.1| ribulose-phosphate 3-epimerase [Yersinia pestis FV-1]
gi|170022490|ref|YP_001718995.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis YPIII]
gi|186897235|ref|YP_001874347.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis PB1/+]
gi|218927366|ref|YP_002345241.1| ribulose-phosphate 3-epimerase [Yersinia pestis CO92]
gi|229836364|ref|ZP_04456531.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis Pestoides A]
gi|229840011|ref|ZP_04460170.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842092|ref|ZP_04462247.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904607|ref|ZP_04519718.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis Nepal516]
gi|270488179|ref|ZP_06205253.1| ribulose-phosphate 3-epimerase [Yersinia pestis KIM D27]
gi|294502244|ref|YP_003566306.1| ribulose-phosphate 3-epimerase [Yersinia pestis Z176003]
gi|51591318|emb|CAH22984.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis IP
32953]
gi|108777718|gb|ABG20237.1| ribulose-5-phosphate 3-epimerase [Yersinia pestis Nepal516]
gi|108781218|gb|ABG15276.1| ribulose-5-phosphate 3-epimerase [Yersinia pestis Antiqua]
gi|115345977|emb|CAL18841.1| ribulose-phosphate 3-epimerase [Yersinia pestis CO92]
gi|145209101|gb|ABP38508.1| ribulose-5-phosphate 3-epimerase [Yersinia pestis Pestoides F]
gi|149290245|gb|EDM40322.1| ribulose-phosphate 3-epimerase [Yersinia pestis CA88-4125]
gi|152962242|gb|ABS49703.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis IP
31758]
gi|162352707|gb|ABX86655.1| ribulose-phosphate 3-epimerase [Yersinia pestis Angola]
gi|165990696|gb|EDR42997.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205673|gb|EDR50153.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167055406|gb|EDR65200.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749024|gb|ACA66542.1| Ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis YPIII]
gi|186700261|gb|ACC90890.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis PB1/+]
gi|229678725|gb|EEO74830.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis Nepal516]
gi|229690402|gb|EEO82456.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696377|gb|EEO86424.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706432|gb|EEO92439.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis Pestoides A]
gi|262360324|gb|ACY57045.1| ribulose-phosphate 3-epimerase [Yersinia pestis D106004]
gi|262364275|gb|ACY60832.1| ribulose-phosphate 3-epimerase [Yersinia pestis D182038]
gi|270336683|gb|EFA47460.1| ribulose-phosphate 3-epimerase [Yersinia pestis KIM D27]
gi|294352703|gb|ADE63044.1| ribulose-phosphate 3-epimerase [Yersinia pestis Z176003]
gi|320013289|gb|ADV96860.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 225
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYITFHPEASEHVDRTLQLIKESGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ FNQ
Sbjct: 186 RQIAAAGADMFVAGSAIFNQ 205
>gi|323487014|ref|ZP_08092326.1| hypothetical protein HMPREF9474_04077 [Clostridium symbiosum
WAL-14163]
gi|323399662|gb|EGA92048.1| hypothetical protein HMPREF9474_04077 [Clostridium symbiosum
WAL-14163]
Length = 222
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 139/199 (69%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL ADF RLGE++ + +AGA IH D+MDG FVP+ISFG +I SLRS ++
Sbjct: 2 IILAPSILGADFKRLGEQVQEVDRAGAPYIHLDIMDGTFVPSISFGMPLIESLRSCTNKT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ +++ + AG D+I H E+ H+ R++ I G TGVA+NP TPV+
Sbjct: 62 FDVHMMVEEPGRYVDDMKKAGADLICVHQEACTHLDRTINQIKEAGLMTGVALNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L +++++DM+LIM+VNPGFGGQ+ I T+ KIR+ + L ++ ++ ++VDGG++ N
Sbjct: 122 TLSCILEQVDMVLIMSVNPGFGGQKFIPYTLGKIRELRNLCNEKGLATRIQVDGGISPAN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
++ +++AGAD++V GS+ F
Sbjct: 182 VRDVIEAGADVIVAGSAVF 200
>gi|54307505|ref|YP_128525.1| ribulose-phosphate 3-epimerase [Photobacterium profundum SS9]
gi|46911925|emb|CAG18723.1| putative ribulose-phosphate 3-epimerase [Photobacterium profundum
SS9]
Length = 220
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 2 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E++ H+ R+L+ I G + GV NP TP+
Sbjct: 62 DVHLMVKPVDRIIPDFAKAGATMITFHAEATEHLDRTLQLIKECGCQAGVVFNPATPLHH 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I +T+ K+R+ + I I LE+DGGV + NI
Sbjct: 122 LDYVMDKVDMILLMSVNPGFGGQSFIPNTLDKLREVRQRIDASGYDIRLEIDGGVKADNI 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FNQ
Sbjct: 182 REIAEAGADMFVAGSAIFNQ 201
>gi|283480134|emb|CAY76050.1| D-ribulose-5-phosphate 3-epimerase [Erwinia pyrifoliae DSM 12163]
Length = 259
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 37 IAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGVTAPI 96
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ +NP TP++I
Sbjct: 97 DVHLMVKPVDRLVPDFAKAGASYITFHPEASEHVDRTLQLIREHGCKAGLVLNPATPLSI 156
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+ILIM+VNPGFGGQ I T+ K+RQ + LI + I LEVDGGV NI
Sbjct: 157 LDYVMDKLDVILIMSVNPGFGGQSFIPGTLNKLRQVRKLIDQSGYDIRLEVDGGVKVDNI 216
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G Y K ++D++
Sbjct: 217 GEIAAAGADMFVAGSAIF---GHPDYKKVIDDMR 247
>gi|170724716|ref|YP_001758742.1| ribulose-phosphate 3-epimerase [Shewanella woodyi ATCC 51908]
gi|169810063|gb|ACA84647.1| Ribulose-phosphate 3-epimerase [Shewanella woodyi ATCC 51908]
Length = 224
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYGVTADI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG IITFHPE+S H+ RSL+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASIITFHPEASEHLDRSLQLIKESGCKAGLVFNPATPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ FN+
Sbjct: 186 AEIAAAGADMFVAGSAIFNK 205
>gi|30995386|ref|NP_438723.2| ribulose-phosphate 3-epimerase [Haemophilus influenzae Rd KW20]
gi|1169388|sp|P44756|RPE_HAEIN RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
Length = 224
Score = 197 bits (502), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 146/220 (66%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
P++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 120 AMPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y + ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKQVIDQIR 216
>gi|146297079|ref|YP_001180850.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410655|gb|ABP67659.1| ribulose-5-phosphate 3-epimerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 221
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 147/219 (67%), Gaps = 7/219 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+++ PSIL+ADFS L E+ + KAGA +H D+MDGCFV NI+ GA V+++LR +++
Sbjct: 2 SVKLAPSILSADFSDLKSEVKKLEKAGADLVHIDIMDGCFVENITIGAQVVKALRRHTNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + + HI+ ++G D IT H E++ H+ L I ++GKK VAINP TP+
Sbjct: 62 FFDVHLMVVNPEKHIDKFIESGADNITVHAETTHHLDALLNKIKSVGKKASVAINPATPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVTS 180
++E+V++ +DM+L+MTVNPG+GGQ+ I T+ KI Q + I KR + +EVDGG+
Sbjct: 122 YLIENVLEIVDMVLVMTVNPGYGGQKFIPYTLKKI-QNLSEIRKREGYNFEIEVDGGINE 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ I V+AGAD++V GS F + + K +N LK S
Sbjct: 181 KTIVECVKAGADVIVAGSYVFESE---NIEKAINKLKNS 216
>gi|197106962|ref|YP_002132339.1| ribulose-phosphate 3-epimerase [Phenylobacterium zucineum HLK1]
gi|196480382|gb|ACG79910.1| ribulose-phosphate 3-epimerase [Phenylobacterium zucineum HLK1]
Length = 219
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFSRLGEE+ I AGA +H DVMDG FVPNI+ G DV+++LR ++ FD
Sbjct: 7 IAPSILASDFSRLGEEVRAIEAAGADWVHVDVMDGHFVPNITIGPDVVKALRPHAKIPFD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ AG DII+ HPE+ PH+ R+L+ I +G K GV +NP T L
Sbjct: 67 VHLMIAPADPYLEGFRAAGADIISVHPEAGPHLHRTLKRIRELGAKAGVVLNPGTDPGPL 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
E ++++ID++L+M+VNPGFGGQ I + K+ + + +I I LEVDGGVT
Sbjct: 127 EWILEDIDLVLVMSVNPGFGGQSFIPGQLRKVERLRRMIDAAGADIILEVDGGVTPETAP 186
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGA LV GS+ F + G YA + L+
Sbjct: 187 RCIAAGATALVAGSAVF-KGGPDRYAANIAALR 218
>gi|329926583|ref|ZP_08280996.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. HGF5]
gi|328939124|gb|EGG35487.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. HGF5]
Length = 219
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 134/202 (66%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LG+EI +GA IH DVMDG FVPNI+ G +++++R ++
Sbjct: 2 IKIAPSILSADFAKLGQEIKEAEASGADWIHVDVMDGHFVPNITLGPPIVQAIRPHTGLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG D+IT H E+ PH+ R + I G K GVAINP TP
Sbjct: 62 LDVHLMIEQPELYIADFVKAGADLITVHAETCPHLHRVIHLIKEHGVKAGVAINPATPAH 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVTSR 181
+L++V+ ++D++L+MTVNPGFGGQ IE T+ KI Q + I +I +EVDGG+T+
Sbjct: 122 VLQEVLPDVDLVLVMTVNPGFGGQAFIERTVSKIAQLREWISNSDNPNIHIEVDGGITAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
+V+AGAD+LV GS+ F +
Sbjct: 182 TAPLVVEAGADVLVAGSAVFGK 203
>gi|322831002|ref|YP_004211029.1| ribulose-phosphate 3-epimerase [Rahnella sp. Y9602]
gi|321166203|gb|ADW71902.1| ribulose-phosphate 3-epimerase [Rahnella sp. Y9602]
Length = 225
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + +AG +HFDVMD +VPN++ G +++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALEAGGDVVHFDVMDNHYVPNLTMGPAILKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG ITFHPE+S H+ RSL+ I + G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRLIPDFAEAGASYITFHPEASEHVDRSLQLIKSHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I I LEVDGGV + NI
Sbjct: 126 LEYVMDKLDVILLMSVNPGFGGQSFIPGTLDKLRQVRKIIDASGYDIRLEVDGGVKADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ FNQ
Sbjct: 186 GEIAAAGADMFVAGSAIFNQ 205
>gi|90423125|ref|YP_531495.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris BisB18]
gi|90105139|gb|ABD87176.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris
BisB18]
Length = 231
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 144/214 (67%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEE+ + +AG IH DVMDG FVPNIS+G DVI+++R ++ +FD
Sbjct: 10 IAPSILASDFSKLGEEVRAVDQAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTKKIFD 69
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV+INP T + +
Sbjct: 70 AHLMIAPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSINPGTSLGAI 129
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+M+VNPGFGGQ I S + KIR +A+ R I +EVDGGVTS L
Sbjct: 130 EYVLDLVDLVLVMSVNPGFGGQAFIPSALNKIRDLRAMTAGRPIDIEVDGGVTSAVSGEL 189
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AGA+ V GS+ F SY + ++ +A
Sbjct: 190 AAAGANAFVAGSAVFKGGTLESYKANIEGIRNAA 223
>gi|295398477|ref|ZP_06808514.1| ribulose-phosphate 3-epimerase [Aerococcus viridans ATCC 11563]
gi|294973292|gb|EFG49082.1| ribulose-phosphate 3-epimerase [Aerococcus viridans ATCC 11563]
Length = 218
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 133/201 (66%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+A+F + +E++ I KAGA +H DVMDG FVPN++FGA V+ +LR +
Sbjct: 3 MYIAPSILSANFGKFIDEVNRIEKAGADWVHIDVMDGHFVPNLTFGAGVVEALRPNTKMT 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++H+ A+AG D T H E++ H+ ++TIH G K GVAINP TPV+
Sbjct: 63 LDCHLMVANPEAHVETFANAGADYFTVHYEATSHLHGLIQTIHKHGMKAGVAINPATPVS 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ ++DMIL+MTVNPGFGGQ IEST+ KI + A + + +EVDGG+ +
Sbjct: 123 AIAPILKDVDMILVMTVNPGFGGQSFIESTVNKIAELSAFRAENDATFLIEVDGGINAET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ + GAD V GS FN+
Sbjct: 183 ARICAENGADAFVAGSYIFNK 203
>gi|291563551|emb|CBL42367.1| ribulose-phosphate 3-epimerase [butyrate-producing bacterium SS3/4]
Length = 221
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 135/199 (67%), Gaps = 2/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFS+LGE++ ++ AGA+ IH DVMDG FVP+ISFG VI SLR +D VFD
Sbjct: 4 LAPSILSADFSKLGEDVKTVSDAGAQYIHLDVMDGAFVPSISFGMPVISSLRKTTDRVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ ++N + AG DII H E+ H+ R++ I G + VA+NP TPV L
Sbjct: 64 VHMMVEEPGRYVNDVRKAGADIICVHQEACLHLDRTINQIKETGARAAVALNPATPVETL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++ E DM LIM+VNPGFGGQ+ I T+ KI++ + ++ + ++ +EVDGGV + N++
Sbjct: 124 SCILKEADMFLIMSVNPGFGGQKFIPYTLEKIKKLRGMLNEAGLTTDIEVDGGVNAANVR 183
Query: 185 SLVQAGADLLVVGSSFFNQ 203
++ AGA+++V GS+ F
Sbjct: 184 EVLDAGANVIVAGSAVFKN 202
>gi|284052726|ref|ZP_06382936.1| ribulose-phosphate 3-epimerase [Arthrospira platensis str. Paraca]
gi|291571673|dbj|BAI93945.1| ribulose-phosphate 3-epimerase [Arthrospira platensis NIES-39]
Length = 233
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 7 SVVIAPSILSADFSRLGEEIRAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPVTKK 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ H E +SPH+ R+L I GK++GV +NP T
Sbjct: 67 PLDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLNLIRECGKQSGVVLNPST 126
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++E V+D D++LIM+VNPGFGGQ+ I + +PKIRQ + + +R + +EVDGG+
Sbjct: 127 PLELIEYVLDVCDLVLIMSVNPGFGGQKFIPTVVPKIRQLRQMCDERGLDPWIEVDGGLK 186
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
N +++AGA+ +V GS+ FN
Sbjct: 187 VDNAWQVLEAGANAIVAGSAVFN 209
>gi|28210915|ref|NP_781859.1| ribulose-phosphate 3-epimerase [Clostridium tetani E88]
gi|28203354|gb|AAO35796.1| ribulose-phosphate 3-epimerase [Clostridium tetani E88]
Length = 217
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 134/199 (67%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ LG +I I K GA +HFDVMDG +VPNISFG +++S++ +
Sbjct: 2 VKIAPSILSADFANLGRDIEAIEKYGAHVVHFDVMDGKYVPNISFGVPIMKSIKGLTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A AG DIITFH E+ H+ R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPSKYIEDFAKAGADIITFHYEAETHLDRTINYIKSFGVKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++D+I +DM+LIM+VNPGFGGQ+ I KIR+ K L + + + +EVDGGV N
Sbjct: 122 LIKDLIPSLDMVLIMSVNPGFGGQKYIYYASDKIRELKKLKDELNKDLIIEVDGGVGKDN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
IK + G DL+V GS+ F
Sbjct: 182 IKDIANCGVDLVVAGSAVF 200
>gi|260581012|ref|ZP_05848835.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae RdAW]
gi|1573553|gb|AAC22224.1| ribulose-phosphate 3-epimerase (dod) [Haemophilus influenzae Rd
KW20]
gi|260092371|gb|EEW76311.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae RdAW]
Length = 234
Score = 197 bits (501), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 146/220 (66%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 11 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 70 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
P++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + I LEVDGG
Sbjct: 130 AMPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y + ++ ++
Sbjct: 190 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKQVIDQIR 226
>gi|256424410|ref|YP_003125063.1| ribulose-phosphate 3-epimerase [Chitinophaga pinensis DSM 2588]
gi|256039318|gb|ACU62862.1| ribulose-phosphate 3-epimerase [Chitinophaga pinensis DSM 2588]
Length = 219
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 2/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA++F LG+E+ + ++ A +H DVMDG FVPNISFG VI LR + FD
Sbjct: 8 IAPSLLASNFLELGKEVEMLNRSEADWLHLDVMDGRFVPNISFGLPVISQLRKATTKTFD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + AG D++T H E+ H+ R+++ I ++G K GVA+NP TPV +L
Sbjct: 68 VHLMIEEPEKYAEDFKKAGADLLTVHYEACTHLHRNIQQIKSLGMKAGVALNPHTPVHLL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
E++I++ID++LIM+VNPGFGGQ I+ ++ KIRQ + +I K +EVDGG+T N
Sbjct: 128 ENIINDIDLVLIMSVNPGFGGQHFIQRSLDKIRQTREMINHYKAHALIEVDGGITLDNAA 187
Query: 185 SLVQAGADLLVVGSSFFNQK 204
S++ AGA++LV GSS F K
Sbjct: 188 SILDAGANVLVAGSSVFASK 207
>gi|254412122|ref|ZP_05025897.1| ribulose-phosphate 3-epimerase [Microcoleus chthonoplastes PCC
7420]
gi|196181088|gb|EDX76077.1| ribulose-phosphate 3-epimerase [Microcoleus chthonoplastes PCC
7420]
Length = 235
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 144/219 (65%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+ADFSRLGE++ + AGA IH DVMDG FVPNI+ G ++++LR ++
Sbjct: 10 IVVAPSILSADFSRLGEQVQAVDAAGADWIHVDVMDGRFVPNITIGPLIVKALRPVTEKP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A+AG DII+ H E +SPH+ R+L I +GK+ GV +NP TP
Sbjct: 70 LDVHLMIVEPEKYVEDFAEAGADIISVHAEHNASPHLHRTLTQIQELGKQAGVVLNPSTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ +++ V+D D++LIM+VNPGFGGQ I +PKIR+ + + +R + +EVDGG+ +
Sbjct: 130 LELIDYVLDVCDLVLIMSVNPGFGGQSFIPGVLPKIRKLRQICDERGLDPWIEVDGGLKA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS F Q YAK + ++ S
Sbjct: 190 DNTWQVLEAGANAIVSGSGVFKQD---DYAKAITGIRNS 225
>gi|238751127|ref|ZP_04612622.1| Ribulose-phosphate 3-epimerase [Yersinia rohdei ATCC 43380]
gi|238710605|gb|EEQ02828.1| Ribulose-phosphate 3-epimerase [Yersinia rohdei ATCC 43380]
Length = 225
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 143/220 (65%), Gaps = 7/220 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++FG V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTFGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG I+FHPE+S H+ R+L+ I G K G+ +NP T ++
Sbjct: 66 DVHLMVKPVDRIIPDFARAGATYISFHPEASEHVDRTLQLIKESGCKAGLVLNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LEYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + AGAD+ V GS+ FNQ YA + D +S LA+
Sbjct: 186 RQIAAAGADMFVAGSAIFNQP---DYATVI-DAMRSELAM 221
>gi|17228277|ref|NP_484825.1| ribulose-phosphate 3-epimerase [Nostoc sp. PCC 7120]
gi|17130127|dbj|BAB72739.1| ribulose-phosphate 3-epimerase [Nostoc sp. PCC 7120]
Length = 235
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 144/219 (65%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 10 IVISPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVTKKP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP TP
Sbjct: 70 LDVHLMIVEPEKYVEDFAKAGADIISVHCEHNASPHLHRTLGQIKELGKQAGVVLNPGTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++E V++ D+ILIM+VNPGFGGQ I +PKIRQ + + +R + +EVDGG+ +
Sbjct: 130 LELIEYVLELCDLILIMSVNPGFGGQSFIPGVVPKIRQLRQMCDERGLDPWIEVDGGLKA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN K YA+ + +++ S
Sbjct: 190 NNTWQVLEAGANAIVAGSAVFNAK---DYAEAITNIRNS 225
>gi|42528097|ref|NP_973195.1| ribulose-phosphate 3-epimerase [Treponema denticola ATCC 35405]
gi|41819142|gb|AAS13114.1| ribulose-phosphate 3-epimerase [Treponema denticola ATCC 35405]
Length = 209
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ PS+L+ADFS+LGEE++ I K G +H DVMDG FVPN++FGA V++S+R
Sbjct: 1 MDRCFKLSPSLLSADFSKLGEELAFIEKHGGDWVHIDVMDGQFVPNLTFGAPVVKSIRPC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFD HLM+++ ++ ++ ADAG D TFH E+S H R + I + G K GV+I P
Sbjct: 61 SKLVFDVHLMVNNPENLVSAFADAGADYFTFHAEASIHADRLIADIRSHGMKAGVSIVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV ILE++ D+IL+M+VNPGFGGQ+LI + K+++ ++L +++ + + VDGG+
Sbjct: 121 TPVGILEEIAPLADLILVMSVNPGFGGQKLIPYCLEKVKRLRSLREEKNYNYLISVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
S+N+ S++ AGAD++V GS+FF+
Sbjct: 181 DSKNVGSVIDAGADVIVSGSAFFS 204
>gi|262277832|ref|ZP_06055625.1| ribulose-phosphate 3-epimerase [alpha proteobacterium HIMB114]
gi|262224935|gb|EEY75394.1| ribulose-phosphate 3-epimerase [alpha proteobacterium HIMB114]
Length = 218
Score = 197 bits (501), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 146/216 (67%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ DFS +G EI + +GA IH DVMDG FVPN++FG VI +R S
Sbjct: 4 IKISPSILSCDFSEIGSEIEKLNNSGADLIHIDVMDGHFVPNLTFGPPVISKIRKCSKLP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS ++ +I ADAG DIITFHPE++ +I+R++ I + KK G+++NPETP
Sbjct: 64 FDVHLMISPVEKYIQDYADAGADIITFHPEATDNIQRTINVIKSCKKKVGISLNPETPST 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E+ + EID+ILIM+VNPGF GQ+ + + K++ ++ I +I +E+DGG+
Sbjct: 124 VIENYLKEIDLILIMSVNPGFAGQKFMPEVLEKVKFFRSKIKNENLNIDIEIDGGIDFET 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++AGA++LV G++ F KGE + ++ + +L+K
Sbjct: 184 APLAIKAGANILVSGTTIF--KGENNISENIKNLRK 217
>gi|134294625|ref|YP_001118360.1| ribulose-phosphate 3-epimerase [Burkholderia vietnamiensis G4]
gi|134137782|gb|ABO53525.1| ribulose-5-phosphate 3-epimerase [Burkholderia vietnamiensis G4]
Length = 228
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 142/225 (63%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F G+ Y K ++++ ++ALA
Sbjct: 183 VKTDNIAEIAAAGADTFVAGSAIF---GKPDYRKVIDEM-RAALA 223
>gi|167465140|ref|ZP_02330229.1| ribulose-phosphate 3-epimerase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322384323|ref|ZP_08058021.1| ribulose-phosphate 3-epimerase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321150825|gb|EFX44262.1| ribulose-phosphate 3-epimerase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 220
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 141/219 (64%), Gaps = 3/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADFS+LG+EI+ + + GA IH DVMDG FVPN++ G ++ ++R ++
Sbjct: 2 VNIAPSILSADFSKLGQEIAEVERGGADWIHVDVMDGHFVPNLTLGPLIVEAIRPHTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D I+ H E+ H+ R+L I +G K GV +NP TP+
Sbjct: 62 LDVHLMIENPDQYIPAFAKAGADWISVHVEACRHLHRTLHLIKELGVKAGVVLNPATPLE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
++E V+ ++DM+L+MTVNPGFGGQ I + +PKI+ +A + +R + +EVDGG+ +
Sbjct: 122 MVEHVLGDLDMVLLMTVNPGFGGQSFIPTVVPKIKALRAKLLERGLGHVLIEVDGGIQEK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V+AG D+LV GS+ F ++ +R+ + A
Sbjct: 182 TASLVVEAGGDVLVAGSAVFGKEDRAEAIRRIKSAARQA 220
>gi|292489890|ref|YP_003532780.1| D-ribulose-5-phosphate 3-epimerase [Erwinia amylovora CFBP1430]
gi|292900928|ref|YP_003540297.1| ribulose-phosphate 3-epimerase [Erwinia amylovora ATCC 49946]
gi|291200776|emb|CBJ47910.1| ribulose-phosphate 3-epimerase [Erwinia amylovora ATCC 49946]
gi|291555327|emb|CBA23671.1| D-ribulose-5-phosphate 3-epimerase [Erwinia amylovora CFBP1430]
gi|312174074|emb|CBX82327.1| D-ribulose-5-phosphate 3-epimerase [Erwinia amylovora ATCC
BAA-2158]
Length = 228
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ +NP TP++I
Sbjct: 66 DVHLMVKPVDRLVPDFAKAGASYITFHPEASEHVDRTLQLIREHGCKAGLVLNPATPLSI 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPGTLNKLRQVRQLIDQSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGA++ V GS+ F G Y K +ND++
Sbjct: 186 GEIAAAGANMFVAGSAIF---GHPDYKKVINDMR 216
>gi|126663243|ref|ZP_01734241.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Flavobacteria bacterium BAL38]
gi|126624901|gb|EAZ95591.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Flavobacteria bacterium BAL38]
Length = 219
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 131/197 (66%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L +I I + A H D+MDG FVPNISFG V+ ++ ++ D
Sbjct: 6 IAPSVLAADFANLQRDIEMINASDADWFHIDIMDGVFVPNISFGMPVLDAINKHAKKTID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I G D++T H E+ H+ R+L+ I A G K GVA+NP T V +L
Sbjct: 66 VHLMIVDPDRYIATFKKLGADVLTVHYEACTHLHRTLQAIKAEGMKAGVALNPHTNVDLL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
EDVI +ID++ IM+VNPGFGGQ IE+T K+++ KALI +++ S +E+DGGVT++N K
Sbjct: 126 EDVIQDIDLVCIMSVNPGFGGQSFIENTYDKVKKLKALIERKNASTLIEIDGGVTNKNAK 185
Query: 185 SLVQAGADLLVVGSSFF 201
L AGAD+LV GS F
Sbjct: 186 QLADAGADVLVAGSYVF 202
>gi|330722059|gb|EGG99978.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC2047]
Length = 230
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSILAA+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILAANFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRQHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I A+AG ITFHPE+S HI RSL I + G K G+ NP TP++
Sbjct: 66 DAHLMVSPVDRMIGEFAEAGATYITFHPEASDHIDRSLELIKSAGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ+ I ST+ KI + I R I LEVDGG+ +NI
Sbjct: 126 LDYVMDKMDMILLMSVNPGFGGQKFIPSTLQKITDLRQRITASGRDIRLEVDGGIGVQNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD V GS+ F +
Sbjct: 186 AEVAAAGADTFVAGSAIFGR 205
>gi|325474689|gb|EGC77875.1| ribulose-phosphate 3-epimerase [Treponema denticola F0402]
Length = 209
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 145/204 (71%), Gaps = 2/204 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ PS+L+ADFS+LGEE++ I K G +H DVMDG FVPN++FGA V++S+R
Sbjct: 1 MDRCFKLSPSLLSADFSKLGEELAFIEKHGGDWVHIDVMDGQFVPNLTFGAPVVKSIRPC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S +FD HLM+++ ++ ++ ADAG D TFH E+S H R + I + G K GV+I P
Sbjct: 61 SKLIFDVHLMVNNPENLVSAFADAGADYFTFHAEASIHADRLIADIRSYGMKAGVSIVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV ILE++ D+IL+M+VNPGFGGQ+LI + K+++ ++L +++ + + VDGG+
Sbjct: 121 TPVGILEEIAPLADLILVMSVNPGFGGQKLIPYCLEKVKRLRSLREEKNYNYLISVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
S+N+ S++ AGAD++V GS+FF+
Sbjct: 181 DSKNVGSVIDAGADVIVSGSAFFS 204
>gi|237746956|ref|ZP_04577436.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes HOxBLS]
gi|229378307|gb|EEO28398.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes HOxBLS]
Length = 227
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 139/218 (63%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF++LG+E+ ++ AGA IHFDVMD +VPN++ G V ++R
Sbjct: 3 TYRIAPSILSADFAQLGKEVRDVVAAGADMIHFDVMDNHYVPNLTIGPMVCSAIRPLVKV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG DII+FHPE+S HI R+L+ IH G K G+ NP TP+
Sbjct: 63 PIDVHLMVKPVDRLVPDFAKAGADIISFHPEASEHIDRTLQLIHDNGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L V+D++D+ILIM+VNPGFGGQ I + KI A+A+I R I LEVDGG+
Sbjct: 123 DYLLHVMDKLDLILIMSVNPGFGGQSFIPHALKKIETARAMIDSSGRQIMLEVDGGIKVE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI + +AGAD V GS+ FN E YA + +++
Sbjct: 183 NIAEVARAGADTFVSGSAIFN---EPDYATVIRQMREQ 217
>gi|322386718|ref|ZP_08060342.1| ribulose-phosphate 3-epimerase [Streptococcus cristatus ATCC 51100]
gi|321269000|gb|EFX51936.1| ribulose-phosphate 3-epimerase [Streptococcus cristatus ATCC 51100]
Length = 219
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 140/208 (67%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+L+AD++ E+ + +GA+ H DVMDG FVPNISFGA V+ S+R +S
Sbjct: 3 TFKIAPSVLSADYANFETELKKLEASGAEYAHLDVMDGHFVPNISFGAGVVASMRPHSKM 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ AL + + +EVDGG+ +
Sbjct: 123 EAIKNVLNLVDQVLVMTVNPGFGGQAFLPETMSKIRELVALREANQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I+ +AGA++ V GS F KG++S+
Sbjct: 183 TIQMAREAGANVFVAGSYVF--KGDVSH 208
>gi|315646183|ref|ZP_07899303.1| ribulose-phosphate 3-epimerase [Paenibacillus vortex V453]
gi|315278382|gb|EFU41698.1| ribulose-phosphate 3-epimerase [Paenibacillus vortex V453]
Length = 219
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 134/202 (66%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LG+EI + GA IH DVMDG FVPNI+ G +++++R ++
Sbjct: 2 IKIAPSILSADFAKLGQEIKDAEAGGADWIHVDVMDGHFVPNITLGPPIVQAIRPHTSLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG D+IT H E+ PH+ R + I G K GVAINP TP
Sbjct: 62 LDVHLMIEQPELYIADFVKAGADLITVHAETCPHLHRVIHLIKEHGVKAGVAINPATPAH 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVTSR 181
+L++V+ ++D++L+MTVNPGFGGQ IE T+ KI Q + I +I +EVDGG+T+
Sbjct: 122 VLQEVLPDLDLVLVMTVNPGFGGQAFIERTVNKISQLREWISSSDFPNIHIEVDGGITAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
+V+AGAD+LV GS+ F +
Sbjct: 182 TAPLVVEAGADVLVAGSAVFGK 203
>gi|170731861|ref|YP_001763808.1| ribulose-phosphate 3-epimerase [Burkholderia cenocepacia MC0-3]
gi|206558807|ref|YP_002229567.1| ribulose-phosphate 3-epimerase [Burkholderia cenocepacia J2315]
gi|169815103|gb|ACA89686.1| Ribulose-phosphate 3-epimerase [Burkholderia cenocepacia MC0-3]
gi|198034844|emb|CAR50712.1| putative ribulose-phosphate 3-epimerase [Burkholderia cenocepacia
J2315]
Length = 228
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 142/225 (63%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F G+ Y K ++++ ++ALA
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRKVIDEM-RAALA 223
>gi|322515567|ref|ZP_08068548.1| ribulose-phosphate 3-epimerase [Actinobacillus ureae ATCC 25976]
gi|322118370|gb|EFX90636.1| ribulose-phosphate 3-epimerase [Actinobacillus ureae ATCC 25976]
Length = 224
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD SRLG++++ + KAG IHFDVMD FVPN++FG + ++LR Y +
Sbjct: 8 IAPSILSADLSRLGDDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRDYGITAEI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ I A AG + ITFHPE++ HI R+L+ I +G K+G+ NP TP++
Sbjct: 68 DVHLMVKPVERLIPDFAKAGANYITFHPEATDHIDRTLQMIRDLGCKSGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L V+D++DMIL+M VNPGFGGQ+ I +T+ K+++A+ I K I LE+DGGV NI
Sbjct: 128 LNYVMDKVDMILLMGVNPGFGGQRFIPATLEKLQEARRRIDKSGYPIRLEIDGGVKIENI 187
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +AGAD V GS+ F+Q
Sbjct: 188 AEIAKAGADTFVAGSAIFDQ 207
>gi|266624059|ref|ZP_06116994.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
gi|288864115|gb|EFC96413.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
Length = 220
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 139/204 (68%), Gaps = 4/204 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL ADF L +++ AGA+ IH DVMDG FVP+ISFG VI SLRS +D VFD
Sbjct: 5 LAPSILGADFKHLEQQVCEAADAGAQYIHLDVMDGDFVPSISFGMPVISSLRSCTDKVFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ +I+ + +AG DII+ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHMMVREPGRYIDAMKEAGADIISVHVEACTHLDRTVNQIKEAGIKAGVVLNPATPIDVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ ++D++DM+L+MTVNPGFGGQ+ I T+ KIR + R +S ++VDGGVT N++
Sbjct: 125 DCILDQVDMVLLMTVNPGFGGQKFIPYTLEKIRALRKKCDMRGLSTDIQVDGGVTCDNVR 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
L++AGA++ V GS+ F KG+++
Sbjct: 185 DLMEAGANIFVAGSAIF--KGDVT 206
>gi|332663812|ref|YP_004446600.1| ribulose-phosphate 3-epimerase [Haliscomenobacter hydrossis DSM
1100]
gi|332332626|gb|AEE49727.1| ribulose-phosphate 3-epimerase [Haliscomenobacter hydrossis DSM
1100]
Length = 224
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 142/200 (71%), Gaps = 2/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF++L E++ + ++ A +HFDVMDG FVPNISFG ++ +++ D
Sbjct: 6 VAPSLLAADFTQLAAEMALVNRSQADWLHFDVMDGRFVPNISFGFPIMEAVQKLCQKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I+ DAG +IT H E+ H+ R+++ I A G K GVA+NP TP+ +L
Sbjct: 66 VHLMILEPEKYISAFRDAGAAVITVHYEACVHLHRTIQEIKASGAKAGVALNPHTPIELL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D+++++D+IL+M+VNPGFGGQ+ I TIPKIR+ K + +R++S +E+DGGV +N +
Sbjct: 126 DDILEDVDLILLMSVNPGFGGQKFIYRTIPKIRRLKDRLIERNLSPLIEIDGGVGLQNAE 185
Query: 185 SLVQAGADLLVVGSSFFNQK 204
L++AGA++LV G+S F K
Sbjct: 186 ELLKAGANVLVAGNSVFGAK 205
>gi|294142772|ref|YP_003558750.1| ribulose-phosphate 3-epimerase [Shewanella violacea DSS12]
gi|293329241|dbj|BAJ03972.1| ribulose-phosphate 3-epimerase [Shewanella violacea DSS12]
Length = 224
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 136/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRMIVDFAKAGASIITFHPEATEHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ K LI I L+VDGG
Sbjct: 120 GTPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVKQLIDASGYDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ FN+
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNK 205
>gi|115375781|ref|ZP_01463034.1| ribulose-phosphate 3-epimerase [Stigmatella aurantiaca DW4/3-1]
gi|310824081|ref|YP_003956439.1| ribulose-phosphate 3-epimerase [Stigmatella aurantiaca DW4/3-1]
gi|115367255|gb|EAU66237.1| ribulose-phosphate 3-epimerase [Stigmatella aurantiaca DW4/3-1]
gi|309397153|gb|ADO74612.1| Ribulose-phosphate 3-epimerase [Stigmatella aurantiaca DW4/3-1]
Length = 217
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 143/219 (65%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PS+L+ DFSRL EE+ + AGA IH DVMDG FVPNI+ G ++++++
Sbjct: 1 MSRRVLISPSLLSCDFSRLAEEVRAVEAAGADWIHVDVMDGRFVPNITLGPVIVQAIKRV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + +I A AG +++T H E+SPH+ R+L+ I G K V +NP
Sbjct: 61 ATKPLDVHLMIVEPERYIEAFAKAGANLLTVHVEASPHLHRTLQQIRQAGAKPSVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP++ +E+V+ E++M+L+M+VNPGFGGQ IE+++ K+R+ +A++ R ++ +EVDGG+
Sbjct: 121 TPLSAIEEVLGEVEMVLVMSVNPGFGGQSFIEASVDKVRRLRAMLDARGLNTDIEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +V AGA +LV GS F K YAK + L+
Sbjct: 181 NEETARRVVDAGASVLVAGSHVFGAK---DYAKAIASLR 216
>gi|123444146|ref|YP_001008116.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122091107|emb|CAL13990.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 225
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYITFHPEASEHVDRTLQLIKESGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ FNQ
Sbjct: 186 RDIAAAGADMFVAGSAIFNQ 205
>gi|325276058|ref|ZP_08141871.1| ribulose-phosphate 3-epimerase [Pseudomonas sp. TJI-51]
gi|324098812|gb|EGB96845.1| ribulose-phosphate 3-epimerase [Pseudomonas sp. TJI-51]
Length = 224
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y +
Sbjct: 6 IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCAALRKYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP T +
Sbjct: 66 DVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIKDGGCKAGLVFNPATSLDA 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+IDM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGGV NI
Sbjct: 126 LKYVMDKIDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGGVNVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ + AGAD V GS+ FN
Sbjct: 186 REIAAAGADTFVAGSAIFN 204
>gi|113869265|ref|YP_727754.1| ribulose-phosphate 3-epimerase [Ralstonia eutropha H16]
gi|113528041|emb|CAJ94386.1| Ribulose-phosphate 3-epimerase [Ralstonia eutropha H16]
Length = 233
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 135/208 (64%), Gaps = 6/208 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP+ +I PSIL+ADF+RLGEE+ +T+AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 TPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHV 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG +IITFHPE+S H+ RSL I G + G+ NP T
Sbjct: 63 TAPIDVHLMVRPVDRIIPDFAKAGANIITFHPEASEHVDRSLALIRDHGCQAGLVFNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ V+D +D+IL+M+VNPGFGGQ I T+ K+R + I + R+I LEVD
Sbjct: 123 PLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDEYTARTGRTILLEVD 182
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GGV NI + AGAD V GS+ F +
Sbjct: 183 GGVKVDNIAEIAAAGADTFVAGSAVFGK 210
>gi|56550914|ref|YP_161753.1| ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241762322|ref|ZP_04760402.1| Ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753394|ref|YP_003226287.1| ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542488|gb|AAV88642.1| Ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241373116|gb|EER62755.1| Ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258552757|gb|ACV75703.1| ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 220
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 149/215 (69%), Gaps = 3/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ LG+E++ I +AGA IH DVMDG FVPNI+ G V+++LR YS FD
Sbjct: 7 IAPSILSADFAHLGDEVAAIDQAGADWIHIDVMDGHFVPNITIGPMVVKALRPYSQKPFD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D +I ++AG DII+FHPE+ H R+++ I ++GKK G+ NP TP++ L
Sbjct: 67 VHLMIAPVDQYIEAFSEAGADIISFHPEAGAHPHRTIQHIKSLGKKAGLVFNPATPLSWL 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+ ++D++D+I++M+VNPGFGGQ+ I++ + KI+ + I R I LEVDGG+ +
Sbjct: 127 DYLMDDLDLIMVMSVNPGFGGQKFIKTQLEKIKDIRQRITASGRDIRLEVDGGIDATTAP 186
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V+AGAD+LV G++ F + G Y + L+KS
Sbjct: 187 LAVEAGADVLVAGTASF-KGGATCYTDNIRILRKS 220
>gi|170723944|ref|YP_001751632.1| ribulose-phosphate 3-epimerase [Pseudomonas putida W619]
gi|169761947|gb|ACA75263.1| Ribulose-phosphate 3-epimerase [Pseudomonas putida W619]
Length = 224
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y +
Sbjct: 6 IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCTALRKYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP T +
Sbjct: 66 DVHLMVSPVDRIIGDFIEAGASYITFHPEASQHIDRSLQLIRDGGCKAGLVFNPATSLDA 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGGV NI
Sbjct: 126 LKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGGVNVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ + AGAD V GS+ FN
Sbjct: 186 REIAAAGADTFVAGSAIFN 204
>gi|89899343|ref|YP_521814.1| ribulose-phosphate 3-epimerase [Rhodoferax ferrireducens T118]
gi|89344080|gb|ABD68283.1| ribulose-5-phosphate 3-epimerase [Rhodoferax ferrireducens T118]
Length = 238
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 138/208 (66%), Gaps = 8/208 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+S++ AG IHFDVMD +VPN++FG + +L+ ++ +
Sbjct: 13 TYRIAPSILSADFARLGEELSHVIAAGCDWIHFDVMDNHYVPNLTFGPMICGALKPHAKT 72
Query: 64 V------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D HLM+ +D+ + ADAG D+I+FHP++S H+ RS++ I A G K G+
Sbjct: 73 AGGVAVPIDVHLMVQPVDALASAFADAGADLISFHPDASGHVHRSIQAIKAKGCKAGLVF 132
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVD 175
NP P+ +L+ VID+ID+ILIM+VNPGFGGQ I+S + KI + I + I LEVD
Sbjct: 133 NPAEPLDVLDWVIDDIDLILIMSVNPGFGGQSFIDSALRKIEDVRRRITACGKDIRLEVD 192
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GGV NI+ + AGAD V GS+ F Q
Sbjct: 193 GGVKVDNIRRVADAGADTFVAGSAIFGQ 220
>gi|86604814|ref|YP_473577.1| ribulose-phosphate 3-epimerase [Synechococcus sp. JA-3-3Ab]
gi|86553356|gb|ABC98314.1| ribulose-phosphate 3-epimerase [Synechococcus sp. JA-3-3Ab]
Length = 236
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 138/204 (67%), Gaps = 4/204 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 13 IVVAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPLVVEALRPVTAKP 72
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H ESS H+ R+L I +GK+ GV +NP +P
Sbjct: 73 LDVHLMIVEPEKYVADFAKAGADIISVHAESSSTIHLHRTLGQIKDLGKQAGVVLNPASP 132
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ +++ V+D +D++LIM+VNPGFGGQ I + +PKIRQ +AL +R + +EVDGG+ +
Sbjct: 133 LELIQYVLDLVDLVLIMSVNPGFGGQSFIPAVVPKIRQLRALCDERGLDPWIEVDGGIKA 192
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
N +++AGA+ +V GS+ F K
Sbjct: 193 SNAWQVIEAGANAIVAGSAVFKAK 216
>gi|224825004|ref|ZP_03698110.1| Ribulose-phosphate 3-epimerase [Lutiella nitroferrum 2002]
gi|224602675|gb|EEG08852.1| Ribulose-phosphate 3-epimerase [Lutiella nitroferrum 2002]
Length = 226
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P +I PS+L+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MRP-FRIAPSLLSADFARLGEEVRDVIAAGADIIHFDVMDNHYVPNLTVGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + D HLM++ +D+ A AG DIITFHPE+S HI R+L I G K G+ NP
Sbjct: 60 TSAPIDVHLMVTPVDALAASFAKAGADIITFHPEASHHIDRTLGLIKDAGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEV 174
TP++ L+ V+D+IDMIL+M+VNPGFGGQ+ I T+ K+R+A+ I + + I LEV
Sbjct: 120 TPLSFLDHVMDKIDMILLMSVNPGFGGQKFIPQTLNKVREARRRIDEYTAAHGGEIWLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFF 201
DGGV NI + AGAD V GS+ +
Sbjct: 180 DGGVKIDNIAEIAAAGADTFVAGSAIY 206
>gi|206575915|ref|YP_002236241.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae 342]
gi|206564973|gb|ACI06749.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae 342]
Length = 225
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV + NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGVKASNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGAD+ V GS+ F Q K++ D +S LA
Sbjct: 186 GEIAAAGADMFVAGSAIFGQPDY----KKVIDQMRSELA 220
>gi|169824366|ref|YP_001691977.1| ribulose-phosphate 3-epimerase [Finegoldia magna ATCC 29328]
gi|167831171|dbj|BAG08087.1| ribulose-phosphate 3-epimerase [Finegoldia magna ATCC 29328]
Length = 218
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 3/201 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVFDC 67
PS+LA +F L + + + G + +H DVMDG FVPNISFG +I+ +R Y + +FDC
Sbjct: 6 PSLLACNFFELEKNLDILKNKGIRYLHLDVMDGNFVPNISFGPAIIKQIREKYPEFIFDC 65
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLM++ ++ IN I DAG DIITFHPE++ H R ++T+H GKK G+A+NP T + +
Sbjct: 66 HLMVNKPENVINDILDAGADIITFHPEATFHPHRIIQTVHKAGKKCGLALNPSTGLESCK 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKS 185
+ID++D+IL+M+VNPGFGGQ IES K+ A+ +I K+ I LEVDGGV + NI
Sbjct: 126 YIIDDLDIILVMSVNPGFGGQSFIESQYLKLIDARNMIKASKKDIILEVDGGVKTSNIDK 185
Query: 186 LVQAGADLLVVGSSFFNQKGE 206
++++GADL+V GS FN E
Sbjct: 186 VLESGADLIVSGSDVFNHNIE 206
>gi|299469833|emb|CBN76687.1| ribulose-phosphate 3-epimerase [Ectocarpus siliculosus]
Length = 276
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 143/217 (65%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I PSIL+AD ++LG+E+ N AGA +HFDVMD +VPN++ G V + LR + +
Sbjct: 51 FWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHGVTN 110
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+S +D + A+AG ITFHPE+SPH+ R+L I + G K G+ NP TP+
Sbjct: 111 PIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPATPL 170
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
+ V+D++D+IL+M+VNPGFGGQ I ST+ K+R+A+ +I + I LEVDGG
Sbjct: 171 DHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGCGVA 230
Query: 182 NIKSLVQAGADLLVVGSSFFNQ-KGEISYAKRLNDLK 217
NIK + +AGAD+ V GS+ FN + E +Y + ++ ++
Sbjct: 231 NIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMR 267
>gi|118442866|ref|YP_878310.1| ribulose-phosphate 3-epimerase [Clostridium novyi NT]
gi|118133322|gb|ABK60366.1| ribulose-phosphate 3-epimerase [Clostridium novyi NT]
Length = 216
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 145/216 (67%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFS LGE+I I K GA IH DVMDG FVPNISFG +++S+R+ +
Sbjct: 2 VKLAPSILSADFSNLGEDIKKIDKYGADVIHIDVMDGMFVPNISFGMPIMKSIRNITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ A G DIIT H E+ H+ R++ I + G K G+A+NP TPV
Sbjct: 62 FDVHLMIEDPARYVEDFAKNGADIITVHYEADKHLDRTINYIKSFGVKAGIALNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I +DM+LIM+VNPGFGGQ+ IE KIR+ K L + + + +EVDGGV + N
Sbjct: 122 SIKHLIGIVDMVLIMSVNPGFGGQKYIEYCSDKIREVKKLAEEFNKDLLIEVDGGVGANN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V+ GA+++V GS+ F + GEI K + +LK+
Sbjct: 182 IKKVVECGANVIVAGSAVF-KNGEIE--KNIKELKE 214
>gi|116695334|ref|YP_840910.1| ribulose-phosphate 3-epimerase [Ralstonia eutropha H16]
gi|729235|sp|P40117|RPEC_RALEH RecName: Full=Ribulose-phosphate 3-epimerase, chromosomal; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|304019|gb|AAA21962.1| D-ribulose-5-phosphate 3 epimerase [Ralstonia eutropha H16]
gi|113529833|emb|CAJ96180.1| Ribulose-phosphate 3-epimerase [Ralstonia eutropha H16]
Length = 241
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 144/224 (64%), Gaps = 7/224 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+ADF+RLGEE+ I GA +HFDVMD +VPN++ G V ++R
Sbjct: 15 AIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPLVSI 74
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG +II+FHPE+S H+ R++ I G K G+ +NP TP+
Sbjct: 75 PIDVHLMVEPVDALIPLFAKAGANIISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATPL 134
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
L+ +D++D++L+M+VNPGFGGQ I + K+RQA+A I G R + LE+DGG
Sbjct: 135 GWLDHTLDQLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVDAGGRPVWLEIDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKSA 220
V + NI ++ +AGAD V GS+ F + Y+ L L+++A
Sbjct: 195 VKADNIAAIARAGADTFVAGSAVFGAPDADGGYSSILYRLREAA 238
>gi|297180121|gb|ADI16344.1| pentose-5-phosphate-3-epimerase [uncultured bacterium HF130_01F24]
Length = 227
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 136/201 (67%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++FG V ++LR+Y S
Sbjct: 6 IAPSILSADFARLGEEVDAVLEAGADVIHFDVMDNHYVPNLTFGPMVCQALRNYKISAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ +D I A AG I+FHPE+S HI RSL+ I G K+G+ NP TP+
Sbjct: 66 DVHLMVTPVDEMILEFARAGASYISFHPEASVHIDRSLQLIRDQGCKSGLVFNPGTPIDC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
LE +ID+ID+IL+M+VNPGFGGQ+ + ST+ K+ + +I I LEVDGG++ NI
Sbjct: 126 LEYLIDKIDVILLMSVNPGFGGQKFLPSTLKKLANVRKIIDDAGLPIRLEVDGGISVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ + AGAD+ V GS+ F
Sbjct: 186 RRVADAGADMFVAGSAIFKNN 206
>gi|325979159|ref|YP_004288875.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325179087|emb|CBZ49131.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 220
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 131/198 (66%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ A AG DI+T H ES+ HI +L+ I A G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERYVDAFAQAGADIMTIHAESTLHIHGALQKIKAAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I + K+ + L ++ +EVDGGV ++ I
Sbjct: 125 IESVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVAKVAQLRDEKGYDFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ AGA++ V GS F
Sbjct: 185 KACYDAGANVFVAGSYLF 202
>gi|209524284|ref|ZP_03272834.1| Ribulose-phosphate 3-epimerase [Arthrospira maxima CS-328]
gi|209495375|gb|EDZ95680.1| Ribulose-phosphate 3-epimerase [Arthrospira maxima CS-328]
Length = 281
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 55 SVVIAPSILSADFSRLGEEIRAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPVTKK 114
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ H E +SPH+ R+L I GK++GV +NP T
Sbjct: 115 PLDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLNLIRECGKQSGVVLNPST 174
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++E V+D D++LIM+VNPGFGGQ+ I + +PKIRQ + + +R + +EVDGG+
Sbjct: 175 PLDLIEYVLDVCDLVLIMSVNPGFGGQKFIPTVVPKIRQLRQMCDERGLDPWIEVDGGLK 234
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
N +++AGA+ +V GS+ FN
Sbjct: 235 IDNTWQVLEAGANAIVAGSAVFN 257
>gi|255525643|ref|ZP_05392576.1| Ribulose-phosphate 3-epimerase [Clostridium carboxidivorans P7]
gi|296185405|ref|ZP_06853815.1| ribulose-phosphate 3-epimerase [Clostridium carboxidivorans P7]
gi|255510629|gb|EET86936.1| Ribulose-phosphate 3-epimerase [Clostridium carboxidivorans P7]
gi|296050239|gb|EFG89663.1| ribulose-phosphate 3-epimerase [Clostridium carboxidivorans P7]
Length = 216
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADFS+LGE++ + K GA +H DVMDG FVPNISFG VI+S+R+ +
Sbjct: 2 IKLAPSILSADFSKLGEDVKALEKYGADWVHIDVMDGMFVPNISFGIPVIKSIRNITSLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + AG D+IT H E+ HI R++ I ++G K G+A+NP TPV
Sbjct: 62 FDVHLMIEEPARFVEDFVKAGADMITIHYETDRHIDRTVNYIKSLGAKVGIALNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I +DM+LIMTVNPGFGGQ+ I KI++ K L K +++ +EVDGG+ N
Sbjct: 122 SIKYLIPNLDMVLIMTVNPGFGGQKYINYCSEKIKELKELSNKFNKNLLIEVDGGIGKDN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
IKS+V+ GA+++V GS+ F
Sbjct: 182 IKSVVECGANVIVAGSAVF 200
>gi|90413589|ref|ZP_01221579.1| ribulose-phosphate 3-epimerase [Photobacterium profundum 3TCK]
gi|90325362|gb|EAS41851.1| ribulose-phosphate 3-epimerase [Photobacterium profundum 3TCK]
Length = 224
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E++ H+ R+L+ I G + GV NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGATMITFHAEATEHLDRTLQLIKECGCQAGVVFNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D+IDMIL+M+VNPGFGGQ I +T+ K+R+ + I I LE+DGGV + NI
Sbjct: 126 LDYVMDKIDMILLMSVNPGFGGQSFIPNTLDKLREVRQRIDASGYDIRLEIDGGVKADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FN+
Sbjct: 186 REIAEAGADMFVAGSAIFNK 205
>gi|92114449|ref|YP_574377.1| ribulose-5-phosphate 3-epimerase [Chromohalobacter salexigens DSM
3043]
gi|91797539|gb|ABE59678.1| ribulose-5-phosphate 3-epimerase [Chromohalobacter salexigens DSM
3043]
Length = 228
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 134/207 (64%), Gaps = 3/207 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS- 61
P +I PSIL+ADF+RLG+E+ ++ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 2 PDFKIAPSILSADFARLGQEVDDVLASGADIVHFDVMDNHYVPNLTIGPMVCEALRKHGV 61
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I DAG ITFHPE+S HI RSL+ I G + G+ NP T
Sbjct: 62 TAPIDAHLMVKPVDRLIGDFIDAGASYITFHPEASEHIDRSLQLIRDGGCRAGLVFNPAT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+A L+ V+D++DM+L+M+VNPGFGGQ I T+ K+R+ + I R I LEVDGGV
Sbjct: 122 PLAYLDHVMDKLDMVLLMSVNPGFGGQSFIPGTLDKLREVRQRIDASGRDIRLEVDGGVK 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGE 206
NI + +AGAD V GS+ F + E
Sbjct: 182 VDNIAEIARAGADTFVAGSAIFKARDE 208
>gi|325523898|gb|EGD02117.1| ribulose-phosphate 3-epimerase [Burkholderia sp. TJI49]
Length = 228
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 141/225 (62%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLTLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+ +A + R I LEVDGG
Sbjct: 123 NYLDHVMDRLDYVLLMSVNPGFGGQSFIPETLNKLRETRARLDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F G+ Y K ++D+ ++ALA
Sbjct: 183 VKTDNIAEIAAAGADTFVAGSAIF---GKPDYRKVIDDM-RAALA 223
>gi|228477034|ref|ZP_04061672.1| ribulose-phosphate 3-epimerase [Streptococcus salivarius SK126]
gi|312863242|ref|ZP_07723480.1| ribulose-phosphate 3-epimerase [Streptococcus vestibularis F0396]
gi|322515992|ref|ZP_08068930.1| ribulose-phosphate 3-epimerase [Streptococcus vestibularis ATCC
49124]
gi|228251053|gb|EEK10224.1| ribulose-phosphate 3-epimerase [Streptococcus salivarius SK126]
gi|311100778|gb|EFQ58983.1| ribulose-phosphate 3-epimerase [Streptococcus vestibularis F0396]
gi|322125527|gb|EFX96868.1| ribulose-phosphate 3-epimerase [Streptococcus vestibularis ATCC
49124]
Length = 219
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ I +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 2 SYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + +++ A AG DI+T H E++ HI +L+ I A G K GV INP TPV
Sbjct: 62 VFDCHLMVVDPERYVDAYAQAGADIMTIHVEATKHIHGALQKIKAAGMKAGVVINPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
L V+D +D +LIMTVNPGFGGQ I + K+ + L G S +EVDGGV +
Sbjct: 122 EALIPVLDLVDQVLIMTVNPGFGGQAFIPEMMSKVERVVELREKGGYSFDIEVDGGVDNN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 182 TIAACAKAGANVFVAGSYLFKNPDLTAQVQTLRD 215
>gi|323141169|ref|ZP_08076070.1| ribulose-phosphate 3-epimerase [Phascolarctobacterium sp. YIT
12067]
gi|322414312|gb|EFY05130.1| ribulose-phosphate 3-epimerase [Phascolarctobacterium sp. YIT
12067]
Length = 214
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 135/202 (66%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +EI I AGA +H DVMDG FVPN++FGA V++ +R +D
Sbjct: 3 IKVAPSILSADFAYLADEIKKIEAAGADWVHIDVMDGQFVPNLTFGAPVVKKIRKVTDLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLM+ + + +I AG D I H E++ H+ R ++ I A G K GVA+NP T +
Sbjct: 63 FDCHLMVENPEKYIADFKAAGADQIVVHVETTKHLHRCIQQIKAEGMKAGVALNPATSLG 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+E+++ +DM+L+MTVNPGFGGQ IE +PKI + A+I +R ++ ++VDGGV +
Sbjct: 123 TVEEILPYVDMVLLMTVNPGFGGQSFIEGVVPKIERLHAMITERGLNVDIQVDGGVNAET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
K + AGA++LV GS + +
Sbjct: 183 SKLVKAAGANVLVAGSYVYGAE 204
>gi|167838029|ref|ZP_02464888.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis MSMB43]
Length = 228
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 141/227 (62%), Gaps = 9/227 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D++LIM+VNPGFGGQ I + K+R A+A I R I LE+DGG
Sbjct: 123 NYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLRDARARIDAHAARTGREIHLEIDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V + NI + AGAD V GS+ F G+ Y + + +++ + A++
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GQPDYRQVIGEMRDALAAVE 226
>gi|152972265|ref|YP_001337411.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896854|ref|YP_002921599.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae NTUH-K2044]
gi|150957114|gb|ABR79144.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549181|dbj|BAH65532.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 225
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV + NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGVKASNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGAD+ V GS+ F Q K++ D +S LA
Sbjct: 186 GEIAAAGADMFVAGSAIFGQPDY----KQVIDQMRSELA 220
>gi|146319647|ref|YP_001199359.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis 05ZYH33]
gi|146321845|ref|YP_001201556.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis 98HAH33]
gi|253752645|ref|YP_003025786.1| ribulose-phosphate 3-epimerase [Streptococcus suis SC84]
gi|253754471|ref|YP_003027612.1| ribulose-phosphate 3-epimerase [Streptococcus suis P1/7]
gi|253756404|ref|YP_003029544.1| ribulose-phosphate 3-epimerase [Streptococcus suis BM407]
gi|145690453|gb|ABP90959.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis 05ZYH33]
gi|145692651|gb|ABP93156.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis 98HAH33]
gi|251816934|emb|CAZ52583.1| putative ribulose-phosphate 3-epimerase [Streptococcus suis SC84]
gi|251818868|emb|CAZ56711.1| putative ribulose-phosphate 3-epimerase [Streptococcus suis BM407]
gi|251820717|emb|CAR47479.1| putative ribulose-phosphate 3-epimerase [Streptococcus suis P1/7]
gi|292559264|gb|ADE32265.1| Ribulose-phosphate 3-epimerase [Streptococcus suis GZ1]
gi|319759061|gb|ADV71003.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis JS14]
Length = 219
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 141/220 (64%), Gaps = 13/220 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSILAAD++ +E+ + K G + +H DVMDG FVPNISFGADV+ ++R +S V
Sbjct: 4 FKIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVPNISFGADVVAAMRPHSKLV 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLM+S+ ++HI A AG DI+T H E++ H+ +L+ I A G K GV INP TP+
Sbjct: 64 FDCHLMVSNPENHIETFARAGADILTIHAEATVHLHGTLQKIRAAGMKVGVVINPGTPLV 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGGV 178
+E V++ +D +L+MTVNPGFGGQ I + + K+R+AK L + +EVDGG+
Sbjct: 124 TIEPVLNLVDQVLLMTVNPGFGGQAYIPEVADKIADLVKLREAKGL----AFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK---RLND 215
+ I S AGA++ V GS F + + AK LND
Sbjct: 180 DDKTIHSAKSAGANVFVAGSYLFKGDLDANVAKLRAALND 219
>gi|315222374|ref|ZP_07864279.1| ribulose-phosphate 3-epimerase [Streptococcus anginosus F0211]
gi|315188535|gb|EFU22245.1| ribulose-phosphate 3-epimerase [Streptococcus anginosus F0211]
Length = 219
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 144/218 (66%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + AGA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SYKIAPSILSADYANFESELKKLEAAGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSRL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIKDFARAGADIISIHAEATPHIHGALQKIRAAGVKASVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ K+R+ L + + +EVDGG+
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELVVLREVNQLDFDIEVDGGIDDE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ +AGA++ V GS F KG++ A+++ LK++
Sbjct: 183 TIRIAKEAGANVFVAGSYVF--KGDV--ARQVQTLKEA 216
>gi|297588344|ref|ZP_06946987.1| ribulose-phosphate 3-epimerase [Finegoldia magna ATCC 53516]
gi|297573717|gb|EFH92438.1| ribulose-phosphate 3-epimerase [Finegoldia magna ATCC 53516]
Length = 216
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 139/201 (69%), Gaps = 3/201 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVFDC 67
PS+LA +F L + + + G K +H DVMDG FVPNISFG +I+ +R Y + + DC
Sbjct: 6 PSLLACNFFELEKNLDILKNNGIKYLHLDVMDGNFVPNISFGPAIIKQIREKYPEFILDC 65
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLM++ ++ I+ + +AG DIITFHPES+ H R ++T+H GKK G+A+NP T + E
Sbjct: 66 HLMVNKPENIIDDMLNAGADIITFHPESTFHPHRIIQTVHKAGKKCGLALNPSTGLECCE 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIKS 185
+ID++D+IL+M+VNPGFGGQ IES KI+ A+ +I K + I LEVDGGV + N+
Sbjct: 126 YIIDDLDIILVMSVNPGFGGQSFIESQHSKIKDARKMIEKSQKDIILEVDGGVKTSNVDK 185
Query: 186 LVQAGADLLVVGSSFFNQKGE 206
++++GA+L+V GS FNQ E
Sbjct: 186 VLESGANLIVSGSDVFNQNIE 206
>gi|262045220|ref|ZP_06018246.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012383|ref|ZP_08307362.1| ribulose-phosphate 3-epimerase [Klebsiella sp. MS 92-3]
gi|259037430|gb|EEW38675.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328533844|gb|EGF60519.1| ribulose-phosphate 3-epimerase [Klebsiella sp. MS 92-3]
Length = 227
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 8 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ RSL+ I G K G+ NP TP++
Sbjct: 68 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV + NI
Sbjct: 128 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGVKASNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGAD+ V GS+ F Q K++ D +S LA
Sbjct: 188 GEIAAAGADMFVAGSAIFGQPDY----KQVIDQMRSELA 222
>gi|104779715|ref|YP_606213.1| ribulose-phosphate 3-epimerase [Pseudomonas entomophila L48]
gi|95108702|emb|CAK13396.1| D-ribulose-5-phosphate 3-epimerase [Pseudomonas entomophila L48]
Length = 224
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y +
Sbjct: 6 IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP T +
Sbjct: 66 DVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNPATGLDA 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGGV NI
Sbjct: 126 LKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGGVNVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ + AGAD V GS+ FN
Sbjct: 186 REITAAGADTFVAGSAIFN 204
>gi|291527111|emb|CBK92697.1| ribulose-phosphate 3-epimerase [Eubacterium rectale M104/1]
Length = 243
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+AD+S LGE++ + +AGA+ +H DVMDG FVP+IS G VI+++R ++ +FD H
Sbjct: 33 PSILSADYSILGEQLKQLDEAGAQYVHIDVMDGSFVPSISIGLPVIKTIRKCTERMFDVH 92
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I+ A AG DIIT H E+ H+ R++ I G GVA+NP TP++ +E
Sbjct: 93 LMIDEPVRYIDDFATAGADIITVHAEACKHLDRTIEAIKEKGILAGVALNPATPLSAIEY 152
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSL 186
V+ ++DM+LIMTVNPGFGGQ+LI T+ K+R KAL+ K + +EVDGGV N+++L
Sbjct: 153 VLPKVDMVLIMTVNPGFGGQKLIPYTVDKVRDLKALLEKTANKADIEVDGGVNLENVETL 212
Query: 187 VQAGADLLVVGSSFFN 202
+ AGA+++V GS+ F+
Sbjct: 213 LAAGANIIVAGSAVFS 228
>gi|311277679|ref|YP_003939910.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae SCF1]
gi|308746874|gb|ADO46626.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae SCF1]
Length = 225
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRKYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG IITFHPE+S H+ RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAAAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGVKVSNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+ V GS+ F+Q Y K ++++++
Sbjct: 186 AEIAAAGADMFVAGSAIFDQP---DYRKVVDEMRRE 218
>gi|269103986|ref|ZP_06156683.1| ribulose-phosphate 3-epimerase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163884|gb|EEZ42380.1| ribulose-phosphate 3-epimerase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 224
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + +GA +HFDVMD +VPN++FGA + ++LR+Y D+
Sbjct: 6 IAPSILSADFARLGEDVEKVLASGADVVHFDVMDNHYVPNLTFGAPICQALRNYGIDAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E++ H+ R+L+ I G K GV NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEATEHLDRTLQLIKEHGCKAGVVFNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D+IDMIL+M+VNPGFGGQ I +T+ K+R+ + I + I LE+DGGV NI
Sbjct: 126 LDYIMDKIDMILLMSVNPGFGGQSFIPATLDKLREVRRRIDESGYDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|262170126|ref|ZP_06037815.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC27]
gi|262021534|gb|EEY40246.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC27]
Length = 224
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGVKVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|269123960|ref|YP_003306537.1| ribulose-phosphate 3-epimerase [Streptobacillus moniliformis DSM
12112]
gi|268315286|gb|ACZ01660.1| ribulose-phosphate 3-epimerase [Streptobacillus moniliformis DSM
12112]
Length = 211
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 143/216 (66%), Gaps = 6/216 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+LAADFS L EE+ I + AK +H D+MDG FVPNISFGADVI+++R Y
Sbjct: 1 MNKEIIIAPSLLAADFSNLKEEVIKIGETKAKWLHLDIMDGNFVPNISFGADVIKAIRPY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLM+ + +I +A AG + IT H E++ H+ R+L+ I + G K GV+INP
Sbjct: 61 SQLHFDAHLMVEKPEWYIETVAKAGVNSITIHAEATKHLHRALQLIKSHGVKAGVSINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + L+++I+E+D+IL+MTVNPGFGGQ+ I++ K+++ + I ++VDGG+
Sbjct: 121 TDIGFLDNIIEELDLILVMTVNPGFGGQKFIDAMCQKVKRIREKF--PHIDIQVDGGIND 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + +AGA++LV GS F+ Y +++N L
Sbjct: 179 KTCLLVKEAGANILVAGSYVFSG----DYNEKVNSL 210
>gi|90020393|ref|YP_526220.1| ribulose-5-phosphate 3-epimerase [Saccharophagus degradans 2-40]
gi|89949993|gb|ABD80008.1| ribulose-5-phosphate 3-epimerase [Saccharophagus degradans 2-40]
Length = 228
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 143/214 (66%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
+I PSIL+ADF+RLGEE+ + KAGA +HFDVMD +VPN++FG V ++LR+Y +
Sbjct: 10 FKIAPSILSADFARLGEEVDAVLKAGADFVHFDVMDNHYVPNLTFGPMVCKALRNYGITA 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + ADAG I+FHP++S H R+++ I +G K GV +NP +
Sbjct: 70 PIDVHLMVDPVDDLVKTFADAGATYISFHPDASRHADRTVKLIRDLGCKPGVVLNPAVTL 129
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++ ++D++DM+L+M+VNPGFGGQ+ I T+ K+++A+A + + LEVDGGV++
Sbjct: 130 ESVKHLLDQVDMLLLMSVNPGFGGQKFIPYTLDKLKEARARLDDAGLEARLEVDGGVSTA 189
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD V GS+ F + S K++ D
Sbjct: 190 NIADVARAGADTFVAGSAIFGAQNYESVIKQMRD 223
>gi|148545701|ref|YP_001265803.1| ribulose-phosphate 3-epimerase [Pseudomonas putida F1]
gi|167031462|ref|YP_001666693.1| ribulose-phosphate 3-epimerase [Pseudomonas putida GB-1]
gi|148509759|gb|ABQ76619.1| ribulose-5-phosphate 3-epimerase [Pseudomonas putida F1]
gi|166857950|gb|ABY96357.1| Ribulose-phosphate 3-epimerase [Pseudomonas putida GB-1]
gi|313496781|gb|ADR58147.1| Rpe [Pseudomonas putida BIRD-1]
Length = 224
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y +
Sbjct: 6 IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCTALRKYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP T +
Sbjct: 66 DVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIKDGGCKAGLVFNPATSLDA 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+IDM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGGV NI
Sbjct: 126 LKYVMDKIDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGGVNVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ + AGAD V GS+ FN
Sbjct: 186 REIAAAGADTFVAGSAIFN 204
>gi|302024548|ref|ZP_07249759.1| ribulose-phosphate 3-epimerase [Streptococcus suis 05HAS68]
gi|330833623|ref|YP_004402448.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis ST3]
gi|329307846|gb|AEB82262.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis ST3]
Length = 219
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 136/212 (64%), Gaps = 10/212 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ +E+ + K G + +H DVMDG FVPNISFGADV+ ++R +S VF
Sbjct: 5 KIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVPNISFGADVVAAMRPHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ ++HI A AG DI+T H E++ H+ +L+ I A G K GV INP TP+
Sbjct: 65 DCHLMVSNPENHIETFARAGADILTIHAEATVHLHGTLQKIRAAGMKVGVVINPGTPLVT 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI------RQAKALIGKRSISLEVDGGVT 179
+E V++ +D +L+MTVNPGFGGQ I KI R+AK L + +EVDGG+
Sbjct: 125 IEPVLNLVDQVLLMTVNPGFGGQAYIPEVAEKIADLVKLREAKGL----NFDIEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ I S AGA++ V GS F + + AK
Sbjct: 181 DKTIHSAKNAGANVFVAGSYLFKGDLDANVAK 212
>gi|229521691|ref|ZP_04411109.1| ribulose-phosphate 3-epimerase [Vibrio cholerae TM 11079-80]
gi|229341285|gb|EEO06289.1| ribulose-phosphate 3-epimerase [Vibrio cholerae TM 11079-80]
Length = 233
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 15 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 74
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 75 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 135 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGVKVENI 194
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 195 REIAEAGADMFVAGSAIFGQ 214
>gi|26987156|ref|NP_742581.1| ribulose-phosphate 3-epimerase [Pseudomonas putida KT2440]
gi|24981789|gb|AAN66045.1|AE016233_11 ribulose-phosphate 3-epimerase [Pseudomonas putida KT2440]
Length = 255
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y +
Sbjct: 37 IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCTALRKYGVTAPI 96
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP T +
Sbjct: 97 DVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIKDGGCKAGLVFNPATSLDA 156
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+IDM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGGV NI
Sbjct: 157 LKYVMDKIDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGGVNVNNI 216
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ + AGAD V GS+ FN
Sbjct: 217 REIAAAGADTFVAGSAIFN 235
>gi|78221294|ref|YP_383041.1| ribulose-5-phosphate 3-epimerase [Geobacter metallireducens GS-15]
gi|78192549|gb|ABB30316.1| ribulose-5-phosphate 3-epimerase [Geobacter metallireducens GS-15]
Length = 221
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 150/217 (69%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R ++
Sbjct: 3 KIAPSILSADFSRLGDEVRAVAAAGADYIHVDVMDGHFVPNITIGPPVVEAVRKVTELPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E+S H+ R+++ I ++GKK GV++NP TP+++
Sbjct: 63 DVHLMIENPDRYIPDFAKAGSDIIVVHAEASVHLHRTIQLIKSLGKKAGVSLNPATPLSV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE V+DE+D++L+MTVNPGFGGQ IE+ +PKI+ +A++ +R + LEVDGGV NI
Sbjct: 123 LEYVLDELDLVLLMTVNPGFGGQSFIEACLPKIQALRAMLDRRGCNAELEVDGGVKIDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++ V GS+ F K Y + + +LK+ A
Sbjct: 183 DRIAHAGANVFVAGSAVFGSK---DYKETIKELKRRA 216
>gi|121729034|ref|ZP_01682035.1| ribulose-phosphate 3-epimerase [Vibrio cholerae V52]
gi|147674230|ref|YP_001218118.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O395]
gi|121628682|gb|EAX61153.1| ribulose-phosphate 3-epimerase [Vibrio cholerae V52]
gi|146316113|gb|ABQ20652.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O395]
gi|227014513|gb|ACP10723.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O395]
Length = 236
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 18 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 77
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 78 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 137
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 138 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGVKVENI 197
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 198 REIAEAGADMFVAGSAIFGQ 217
>gi|322373746|ref|ZP_08048282.1| ribulose-phosphate 3-epimerase [Streptococcus sp. C150]
gi|321278788|gb|EFX55857.1| ribulose-phosphate 3-epimerase [Streptococcus sp. C150]
Length = 239
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ + +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 22 SYKIAPSILAADYANFASELARVDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 81
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + +++ A AG DI+T H E++ HI +L+ I A G K G INP TPV
Sbjct: 82 VFDCHLMVVDPERYVDAYAQAGADIMTIHVEATKHIHGALQKIKAAGMKAGAVINPGTPV 141
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
L V+D +D +LIMTVNPGFGGQ I + K+ + L G S +EVDGGV ++
Sbjct: 142 EALIPVLDLVDQVLIMTVNPGFGGQAFIPEMMSKVERVVELRQKGGYSFDIEVDGGVDNK 201
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 202 TIAACAKAGANVFVAGSYLFKNPDLTAQVQTLRD 235
>gi|225869786|ref|YP_002745733.1| ribulose-phosphate 3-epimerase [Streptococcus equi subsp. equi
4047]
gi|225699190|emb|CAW92446.1| putative ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
equi 4047]
Length = 220
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 133/201 (66%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSILAAD++ E++ I K A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 SLKIAPSILAADYACFAAELARIEKTDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + + ++ A AG DI+T H ES+ H +L+ I A G K GV INP TPV
Sbjct: 63 VFDCHLMVVNPERYVEAFAQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ +E ++ +D +LIMTVNPGFGGQ I + K+ + +R +S +EVDGGV +
Sbjct: 123 SAVEPLLSLVDQVLIMTVNPGFGGQAFIPECLEKVAAIAKMRDERGLSFDIEVDGGVDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I++ QAGA++ V GS F
Sbjct: 183 TIRACYQAGANVFVAGSYLFK 203
>gi|195977407|ref|YP_002122651.1| ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974112|gb|ACG61638.1| ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 220
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 133/201 (66%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSILAAD++ E++ I K A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 SLKIAPSILAADYACFAAELARIEKTNAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + + ++ A AG DI+T H ES+ H +L+ I A G K GV INP TPV
Sbjct: 63 VFDCHLMVVNPERYVEAFAQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ +E ++ +D +LIMTVNPGFGGQ I + K+ + +R +S +EVDGGV +
Sbjct: 123 SAVEPLLSLVDQVLIMTVNPGFGGQAFIPDCLEKVAAIAKMRDERGLSFDIEVDGGVDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I++ QAGA++ V GS F
Sbjct: 183 TIRACYQAGANVFVAGSYLFK 203
>gi|296105078|ref|YP_003615224.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059537|gb|ADF64275.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 225
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 143/216 (66%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ +N AGA +HFDVMD +VPN++ G V+++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTANALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPHTLDKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+ V GS+ F+Q Y K ++++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMRRE 218
>gi|251797733|ref|YP_003012464.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. JDR-2]
gi|247545359|gb|ACT02378.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. JDR-2]
Length = 214
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 139/201 (69%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLG+EI +AGA IH DVMDG FVPN++FG VI ++R + FD
Sbjct: 4 IAPSILSADFARLGDEIKAAEEAGADWIHVDVMDGHFVPNLTFGPPVIAAVRPATKLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I A AG D IT H E++ H+ R+++ I +G GVA+NP TP+++L
Sbjct: 64 VHLMIERPELSIPSYAAAGADRITVHAEATVHLHRTIQQIKDLGLPAGVALNPGTPLSVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRNI 183
E ++ ++D+ILIMTVNPGFGGQ IE ++ K+RQ + ++ +R + ++VDGG+ S
Sbjct: 124 EHILGDVDLILIMTVNPGFGGQAFIEESLNKLRQLRKMLNERGLGHVHVQVDGGINSVTA 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K +V+AGA++LV G++ F ++
Sbjct: 184 KQVVEAGANVLVAGNAVFGER 204
>gi|157377391|ref|YP_001475991.1| ribulose-phosphate 3-epimerase [Shewanella sediminis HAW-EB3]
gi|157319765|gb|ABV38863.1| Ribulose-phosphate 3-epimerase [Shewanella sediminis HAW-EB3]
Length = 224
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 135/206 (65%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCQALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRMIPDFAKAGATFITFHPEASEHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI I LEVDGG
Sbjct: 120 GTPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRKLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ FN+
Sbjct: 180 VKVDNIGEIAAAGADMFVAGSAIFNK 205
>gi|223933770|ref|ZP_03625742.1| Ribulose-phosphate 3-epimerase [Streptococcus suis 89/1591]
gi|223897574|gb|EEF63963.1| Ribulose-phosphate 3-epimerase [Streptococcus suis 89/1591]
Length = 219
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 140/219 (63%), Gaps = 13/219 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ +E+ + K G + +H DVMDG FVPNISFGADV+ ++R +S VF
Sbjct: 5 KIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVPNISFGADVVAAMRPHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ ++HI A AG DI+T H E++ H++ +L+ I A G K GV INP TP+
Sbjct: 65 DCHLMVSNPENHIETFARAGADILTIHAEATVHLQGTLQKIRAAGMKVGVVINPGTPLVT 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI------RQAKALIGKRSISLEVDGGVT 179
+E V++ +D +L+MTVNPGFGGQ I KI R+A+ L + +EVDGG+
Sbjct: 125 IEPVLNLVDQVLLMTVNPGFGGQAYIPEVAEKIEALVKLREARGL----NFDIEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAK---RLND 215
+ I S AGA++ V GS F + + AK LND
Sbjct: 181 DKTIHSAKNAGANVFVAGSYLFKGDLDANVAKLRAALND 219
>gi|298530757|ref|ZP_07018159.1| ribulose-phosphate 3-epimerase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510131|gb|EFI34035.1| ribulose-phosphate 3-epimerase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 225
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 134/214 (62%), Gaps = 5/214 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+LA+DFS L E+S + +AG +H+DVMDG FVPNI+FG +I R S FD H
Sbjct: 11 PSLLASDFSNLAGELSALEEAGLTWVHWDVMDGSFVPNITFGPPIIAGCRKKSRLFFDVH 70
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI D ++ AG D++ H E+ H+ R+L I +G + VA+NP TP+ ILE
Sbjct: 71 LMIEEPDRYLEDFVRAGADLLCVHAEACRHLERTLSEIARLGARPAVALNPHTPLEILEY 130
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
V+ +DM+LIM+VNPGFGGQ+ I ++ KIR+ K++I R ++VDGGVT N L
Sbjct: 131 VLPRLDMVLIMSVNPGFGGQKFIPFSMEKIRRLKSMIAARDCKTLIQVDGGVTPENTGEL 190
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
VQ GAD+LV GS+FF Y +RL +A
Sbjct: 191 VQCGADVLVSGSAFFAHP---PYRERLKTFINAA 221
>gi|255744408|ref|ZP_05418360.1| ribulose-phosphate 3-epimerase [Vibrio cholera CIRS 101]
gi|262158479|ref|ZP_06029594.1| ribulose-phosphate 3-epimerase [Vibrio cholerae INDRE 91/1]
gi|262190839|ref|ZP_06049061.1| ribulose-phosphate 3-epimerase [Vibrio cholerae CT 5369-93]
gi|255737933|gb|EET93326.1| ribulose-phosphate 3-epimerase [Vibrio cholera CIRS 101]
gi|262029640|gb|EEY48289.1| ribulose-phosphate 3-epimerase [Vibrio cholerae INDRE 91/1]
gi|262033288|gb|EEY51804.1| ribulose-phosphate 3-epimerase [Vibrio cholerae CT 5369-93]
gi|327485105|gb|AEA79512.1| Ribulose-phosphate 3-epimerase [Vibrio cholerae LMA3894-4]
Length = 224
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGVKVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|297567604|ref|YP_003686575.1| ketose-bisphosphate aldolase class-II [Meiothermus silvanus DSM
9946]
gi|296852053|gb|ADH65067.1| ketose-bisphosphate aldolase class-II [Meiothermus silvanus DSM
9946]
Length = 224
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 139/212 (65%), Gaps = 4/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL ADF+RLGE+I +AG IH DVMDG FVPN++FG V+ ++R +
Sbjct: 5 RIAPSILTADFARLGEQIREAEEAGVDWIHLDVMDGRFVPNLTFGPLVVEAIRGVTRLPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + ++ A AG D+ITFH E++PH R L+ I +GK+ G+A+NP TP+
Sbjct: 65 DVHLMIAEPERYLEDFARAGADLITFHAEATPHAHRGLQRIKELGKRAGLAVNPGTPLEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ---AKALIGKRSISLEVDGGVTSRN 182
L ++ E+D+ L+M+VNPGFGGQ+ I +T +I++ KA + + LEVDGG+ N
Sbjct: 125 LTHLLPELDLALVMSVNPGFGGQRYIPATTDRIKRLANLKAHLNPECL-LEVDGGIKPEN 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGAD+LVVGS+ FN++ +RL
Sbjct: 184 AAEIYRAGADVLVVGSALFNRQPLAHNLERLK 215
>gi|153214882|ref|ZP_01949680.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 1587]
gi|124115041|gb|EAY33861.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 1587]
Length = 236
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 18 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGASICKALRDYGITAPI 77
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 78 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 137
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 138 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGVKVENI 197
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 198 REIAEAGADMFVAGSAIFGQ 217
>gi|221194506|ref|ZP_03567563.1| ribulose-phosphate 3-epimerase [Atopobium rimae ATCC 49626]
gi|221185410|gb|EEE17800.1| ribulose-phosphate 3-epimerase [Atopobium rimae ATCC 49626]
Length = 224
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 142/224 (63%), Gaps = 7/224 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ I PS+L+ADF+RL E+ +I A IH+DVMDG FVPNISFG +++ + +
Sbjct: 3 NVYIAPSVLSADFTRLAHELESIKSA--DYIHYDVMDGHFVPNISFGPAIMKEAQKATQM 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+++ I + D G DI+TFH E++PH R + I + G + G+AINP TPV
Sbjct: 61 PFDVHLMVTNPAEIIPLFLDLGADIVTFHMEATPHAHRLVHLIRSAGARAGIAINPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
LED+I+++D++L+M+VNPGFGGQ+ I KIRQ K L ++ +EVDGGV++
Sbjct: 121 CFLEDIIEDVDLVLVMSVNPGFGGQKFIPGAYAKIRQVKELCKSHQVTPLIEVDGGVSAA 180
Query: 182 NIKSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLKKSALA 222
N LV AGA +LV GS+ F +++ IS K L S A
Sbjct: 181 NASELVSAGATMLVAGSAIFKADDREAAISELKHEARLGNSTQA 224
>gi|291526155|emb|CBK91742.1| ribulose-phosphate 3-epimerase [Eubacterium rectale DSM 17629]
Length = 243
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+AD+S LGE++ + +AGA+ +H DVMDG FVP+IS G VI+++R ++ +FD H
Sbjct: 33 PSILSADYSILGEQLKQLDEAGAQYVHIDVMDGSFVPSISIGLPVIKTIRKCTERMFDVH 92
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I+ A AG DIIT H E+ H+ R++ I G GVA+NP TP++ +E
Sbjct: 93 LMIDEPVRYIDDFAAAGADIITVHAEACKHLDRTIEAIKEKGILAGVALNPATPLSAIEY 152
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSL 186
V+ ++DM+LIMTVNPGFGGQ+LI T+ K+R KAL+ K + +EVDGGV N+++L
Sbjct: 153 VLPKVDMVLIMTVNPGFGGQKLIPYTVDKVRDLKALLEKTANKADIEVDGGVNLENVETL 212
Query: 187 VQAGADLLVVGSSFFN 202
+ AGA+++V GS+ F+
Sbjct: 213 LAAGANIIVAGSAVFS 228
>gi|225869262|ref|YP_002745210.1| ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
zooepidemicus]
gi|225702538|emb|CAX00492.1| putative ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
zooepidemicus]
Length = 220
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 133/201 (66%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSILAAD++ E++ I K A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 SLKIAPSILAADYACFAAELARIEKTDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + + ++ A AG DI+T H ES+ H +L+ I A G K GV INP TPV
Sbjct: 63 VFDCHLMVVNPERYVEAFAQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ +E ++ +D +LIMTVNPGFGGQ I + K+ + +R +S +EVDGGV +
Sbjct: 123 SAVEPLLSLVDQVLIMTVNPGFGGQAFIPECLEKVAAIAKMRDERGLSFDIEVDGGVDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I++ QAGA++ V GS F
Sbjct: 183 TIRACYQAGANVFVAGSYLFK 203
>gi|218550642|ref|YP_002384433.1| ribulose-phosphate 3-epimerase [Escherichia fergusonii ATCC 35469]
gi|218358183|emb|CAQ90830.1| D-ribulose-5-phosphate 3-epimerase [Escherichia fergusonii ATCC
35469]
Length = 225
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K ++D++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDDMR 216
>gi|238924689|ref|YP_002938205.1| ribulose-phosphate 3-epimerase [Eubacterium rectale ATCC 33656]
gi|238876364|gb|ACR76071.1| ribulose-phosphate 3-epimerase [Eubacterium rectale ATCC 33656]
Length = 216
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 143/208 (68%), Gaps = 2/208 (0%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+AD+S LGE++ + +AGA+ +H DVMDG FVP+IS G VI+++R ++ +FD H
Sbjct: 6 PSILSADYSILGEQLKQLDEAGAQYVHIDVMDGSFVPSISIGLPVIKTIRKCTERMFDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I+ A AG DIIT H E+ H+ R++ I G GVA+NP TP++ +E
Sbjct: 66 LMIDEPVRYIDDFAAAGADIITVHAEACKHLDRTIEAIKEKGILAGVALNPATPLSAIEY 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSL 186
V+ ++DM+LIMTVNPGFGGQ+LI T+ K+R KAL+ K + +EVDGGV N+++L
Sbjct: 126 VLPKVDMVLIMTVNPGFGGQKLIPYTVDKVRDLKALLEKTANKADIEVDGGVNLENVETL 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGA+++V GS+ F+ E + LN
Sbjct: 186 LAAGANIIVAGSAVFSGDIEENVKGFLN 213
>gi|55821769|ref|YP_140211.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus LMG
18311]
gi|55823687|ref|YP_142128.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus
CNRZ1066]
gi|55737754|gb|AAV61396.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus LMG
18311]
gi|55739672|gb|AAV63313.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus
CNRZ1066]
Length = 239
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 134/214 (62%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ I +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 22 SYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 81
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H E++ HI +++ I A G K GV INP TPV
Sbjct: 82 VFDCHLMVVDPERYVTAYAQAGADIMTIHVEATKHIHGAIQKIKAAGMKAGVVINPGTPV 141
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
L V+ +D +LIMTVNPGFGGQ I + K+ Q L G S +EVDGGV ++
Sbjct: 142 EALIPVLALVDQVLIMTVNPGFGGQTFIPEMMSKVEQVVELRQKGGYSFDIEVDGGVDNK 201
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 202 TIAACAKAGANVFVAGSYLFKNHDLTAQVQTLRD 235
>gi|330815422|ref|YP_004359127.1| Ribulose-phosphate 3-epimerase [Burkholderia gladioli BSR3]
gi|327367815|gb|AEA59171.1| Ribulose-phosphate 3-epimerase [Burkholderia gladioli BSR3]
Length = 228
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 139/225 (61%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANVISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D+ILIM+VNPGFGGQ I + KIR+A+A I R I LEVDGG
Sbjct: 123 HYLDHVMDRLDLILIMSVNPGFGGQSFIPEALRKIREARAKIDAYRERTGREIHLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD V GS+ F G+ Y K + D ++ALA
Sbjct: 183 VKVDNIAEIAAAGADTFVAGSAIF---GKPDY-KAVIDEMRTALA 223
>gi|157960073|ref|YP_001500107.1| ribulose-phosphate 3-epimerase [Shewanella pealeana ATCC 700345]
gi|157845073|gb|ABV85572.1| Ribulose-phosphate 3-epimerase [Shewanella pealeana ATCC 700345]
Length = 224
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDVDAVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRNYGVTADI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ R+L+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRTLQLIKESGCKAGLVFNPATPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + LI I L+VDGGV NI
Sbjct: 126 LDHVMDKLDVILLMSVNPGFGGQSFIPTTLDKLRQVRKLIDDSGYDIRLQVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ FN+
Sbjct: 186 GEIAAAGADMFVAGSAIFNK 205
>gi|229524605|ref|ZP_04414010.1| ribulose-phosphate 3-epimerase [Vibrio cholerae bv. albensis VL426]
gi|229338186|gb|EEO03203.1| ribulose-phosphate 3-epimerase [Vibrio cholerae bv. albensis VL426]
Length = 233
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 15 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 74
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 75 DVHLMVKPVDRIIPDFAKAGASMITFHVETSEHVDRTLQLIKECGCQAGVVLNPATPLHH 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 135 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGVKVENI 194
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 195 REIAEAGADMFVAGSAIFGQ 214
>gi|229507323|ref|ZP_04396828.1| ribulose-phosphate 3-epimerase [Vibrio cholerae BX 330286]
gi|229509753|ref|ZP_04399234.1| ribulose-phosphate 3-epimerase [Vibrio cholerae B33]
gi|229513548|ref|ZP_04403012.1| ribulose-phosphate 3-epimerase [Vibrio cholerae TMA 21]
gi|229516878|ref|ZP_04406324.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC9]
gi|229527446|ref|ZP_04416838.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 12129(1)]
gi|229606829|ref|YP_002877477.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MJ-1236]
gi|229335078|gb|EEO00563.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 12129(1)]
gi|229345941|gb|EEO10913.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC9]
gi|229349425|gb|EEO14381.1| ribulose-phosphate 3-epimerase [Vibrio cholerae TMA 21]
gi|229353227|gb|EEO18166.1| ribulose-phosphate 3-epimerase [Vibrio cholerae B33]
gi|229354828|gb|EEO19749.1| ribulose-phosphate 3-epimerase [Vibrio cholerae BX 330286]
gi|229369484|gb|ACQ59907.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MJ-1236]
Length = 233
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 15 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 74
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 75 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 135 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGVKVENI 194
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 195 REIAEAGADMFVAGSAIFGQ 214
>gi|15642620|ref|NP_232253.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121588099|ref|ZP_01677847.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 2740-80]
gi|153819037|ref|ZP_01971704.1| ribulose-phosphate 3-epimerase [Vibrio cholerae NCTC 8457]
gi|153821554|ref|ZP_01974221.1| ribulose-phosphate 3-epimerase [Vibrio cholerae B33]
gi|153825097|ref|ZP_01977764.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MZO-2]
gi|153830049|ref|ZP_01982716.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 623-39]
gi|183179608|ref|ZP_02957819.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MZO-3]
gi|227082741|ref|YP_002811292.1| ribulose-phosphate 3-epimerase [Vibrio cholerae M66-2]
gi|254226800|ref|ZP_04920373.1| ribulose-phosphate 3-epimerase [Vibrio cholerae V51]
gi|254285819|ref|ZP_04960781.1| ribulose-phosphate 3-epimerase [Vibrio cholerae AM-19226]
gi|254851164|ref|ZP_05240514.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MO10]
gi|297581465|ref|ZP_06943388.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC385]
gi|298500552|ref|ZP_07010356.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MAK 757]
gi|9657215|gb|AAF95766.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547642|gb|EAX57739.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 2740-80]
gi|125620693|gb|EAZ49054.1| ribulose-phosphate 3-epimerase [Vibrio cholerae V51]
gi|126510418|gb|EAZ73012.1| ribulose-phosphate 3-epimerase [Vibrio cholerae NCTC 8457]
gi|126520939|gb|EAZ78162.1| ribulose-phosphate 3-epimerase [Vibrio cholerae B33]
gi|148874448|gb|EDL72583.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 623-39]
gi|149741243|gb|EDM55285.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MZO-2]
gi|150424001|gb|EDN15940.1| ribulose-phosphate 3-epimerase [Vibrio cholerae AM-19226]
gi|183013019|gb|EDT88319.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MZO-3]
gi|227010629|gb|ACP06841.1| ribulose-phosphate 3-epimerase [Vibrio cholerae M66-2]
gi|254846869|gb|EET25283.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MO10]
gi|297534303|gb|EFH73141.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC385]
gi|297540721|gb|EFH76778.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MAK 757]
Length = 236
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 18 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 77
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 78 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 137
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 138 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGVKVENI 197
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 198 REIAEAGADMFVAGSAIFGQ 217
>gi|75910871|ref|YP_325167.1| ribulose-phosphate 3-epimerase [Anabaena variabilis ATCC 29413]
gi|75704596|gb|ABA24272.1| ribulose-5-phosphate 3-epimerase [Anabaena variabilis ATCC 29413]
Length = 235
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 144/219 (65%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 10 IVISPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVTKKP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP TP
Sbjct: 70 LDVHLMIVEPEKYVEDFAKAGADIISVHCEHNASPHLHRTLGQIKELGKQAGVVLNPGTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++E V++ D+ILIM+VNPGFGGQ I +PKIR+ + + +R + +EVDGG+ +
Sbjct: 130 LELIEYVLELCDLILIMSVNPGFGGQSFIPGVVPKIRKLRQMCDERGLDPWIEVDGGLKA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN K YA+ + +++ S
Sbjct: 190 NNTWQVLEAGANAIVAGSAVFNAK---DYAEAITNIRNS 225
>gi|194290852|ref|YP_002006759.1| ribulose-phosphate 3-epimerase [Cupriavidus taiwanensis LMG 19424]
gi|193224687|emb|CAQ70698.1| D-ribulose-5-phosphate 3-epimerase [Cupriavidus taiwanensis LMG
19424]
Length = 233
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 134/207 (64%), Gaps = 6/207 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PSIL+ADF+RLGEE+ +T+AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 4 PTFRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHVS 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ +D I A AG +IITFHPE+S H+ RSL I G + G+ NP TP
Sbjct: 64 APIDVHLMVRPVDRIIPDFAKAGANIITFHPEASEHVDRSLALIRDHGCQAGLVFNPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDG 176
+ L+ V+D +D+IL+M+VNPGFGGQ I T+ K+R + I R+I LEVDG
Sbjct: 124 LHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDAYTARTGRTILLEVDG 183
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GV NI + +AGAD V GS+ F +
Sbjct: 184 GVKVDNIAEIARAGADTFVAGSAVFGK 210
>gi|238788955|ref|ZP_04632745.1| Ribulose-phosphate 3-epimerase [Yersinia frederiksenii ATCC 33641]
gi|238722982|gb|EEQ14632.1| Ribulose-phosphate 3-epimerase [Yersinia frederiksenii ATCC 33641]
Length = 225
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ FNQ
Sbjct: 186 RQIAAAGADMFVAGSAIFNQ 205
>gi|317404600|gb|EFV85004.1| ribulose-phosphate 3-epimerase [Achromobacter xylosoxidans C54]
Length = 239
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 137/209 (65%), Gaps = 6/209 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 9 MSTTTRITPSILSADFARLGEEVRDVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPH 68
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D+ + + A AG + I+FHPE+S H+ R+L I G K G+ NP
Sbjct: 69 VSVPIDVHLMVEPVDALVPMFAKAGANYISFHPEASRHVDRTLSLIRENGCKAGLVFNPA 128
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEV 174
TP++ L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+A I G I L+V
Sbjct: 129 TPLSYLDHVMDKVDLVLIMSVNPGFGGQSFIPGALAKLREARARIDAWTQAGGHEIVLQV 188
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
DGGV NI + +AGAD V GS+ F +
Sbjct: 189 DGGVKIDNIAEIRRAGADTFVAGSAIFGK 217
>gi|156936455|ref|YP_001440371.1| ribulose-phosphate 3-epimerase [Cronobacter sakazakii ATCC BAA-894]
gi|156534709|gb|ABU79535.1| hypothetical protein ESA_04356 [Cronobacter sakazakii ATCC BAA-894]
Length = 229
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 143/214 (66%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 10 IAPSILSADFARLGEDTARVLAAGADVVHFDVMDNHYVPNLTIGPMVLKALRDYGITAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I ADAG IITFHPE+S HI RSL+ I G K G+ NP TP++
Sbjct: 70 DVHLMVKPVDRLIPDFADAGASIITFHPEASEHIDRSLQLIKEHGCKAGLVFNPATPLSY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+++ + I R I LEVDGGV NI
Sbjct: 130 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLEKLKEVRQRIDASGRDIRLEVDGGVKVSNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGAD+ V GS+ FN E Y K +ND++
Sbjct: 190 GAIAAAGADMFVAGSAIFN---EPDYQKVINDMR 220
>gi|167564222|ref|ZP_02357138.1| ribulose-phosphate 3-epimerase [Burkholderia oklahomensis EO147]
gi|167571373|ref|ZP_02364247.1| ribulose-phosphate 3-epimerase [Burkholderia oklahomensis C6786]
Length = 228
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LE+DGG
Sbjct: 123 NYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEIDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V + NI + AGAD V GS+ F G+ Y + + +++ +
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRQVIGEMRDA 221
>gi|168188132|ref|ZP_02622767.1| ribulose-phosphate 3-epimerase [Clostridium botulinum C str.
Eklund]
gi|169294034|gb|EDS76167.1| ribulose-phosphate 3-epimerase [Clostridium botulinum C str.
Eklund]
Length = 216
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 144/216 (66%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADFS LGE+I I K GA IH DVMDG FVPNISFG +I+S+R+ +
Sbjct: 2 VNLAPSILSADFSNLGEDIKKIDKYGADIIHIDVMDGMFVPNISFGIPIIKSIRNITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A +G DIIT H E+ H+ R++ I + G K G+A+NP TPV
Sbjct: 62 FDVHLMIEDPARYIENFAKSGADIITVHYEADRHLDRTINYIKSFGVKAGIALNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+ +I +DM+LIM+VNPGFGGQ+ IE KIR+ K L + + + +EVDGGV + N
Sbjct: 122 SIRHLIGIVDMVLIMSVNPGFGGQKYIEYCSDKIRKVKELAKELNKDLLIEVDGGVGANN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V+ GA+++V GS+ F + GEI K + ++K+
Sbjct: 182 IKKVVECGANVIVAGSAVF-KNGEIE--KNIKEIKE 214
>gi|23098966|ref|NP_692432.1| ribulose-phosphate 3-epimerase [Oceanobacillus iheyensis HTE831]
gi|22777194|dbj|BAC13467.1| ribulose-phosphate 3-epimerase [Oceanobacillus iheyensis HTE831]
Length = 218
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 134/201 (66%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF++LG+EI + +AGA IH DVMDG FVPNI+ G V+ ++R +D
Sbjct: 3 KIAPSILSADFAKLGQEIKEVEEAGADYIHVDVMDGHFVPNITIGPLVVEAIRPITDLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A+AG IIT H E+ H+ R+L+ I + G K GV INP TPV +
Sbjct: 63 DVHLMIENPDAYIPAFAEAGASIITVHQEACVHLHRTLQLIRSHGVKPGVVINPATPVEM 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ E+D+ILIMTVNPGFGGQ I+ T KI+Q K +S +EVDGGV +
Sbjct: 123 IKPILAEVDLILIMTVNPGFGGQSFIQETTSKIKQLADWREKYKLSYEIEVDGGVNEKTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+GAD+LV GS+ FN +
Sbjct: 183 GICTTSGADVLVAGSAIFNHE 203
>gi|288906190|ref|YP_003431412.1| ribulose-5-phosphate 3-epimerase [Streptococcus gallolyticus UCN34]
gi|306832233|ref|ZP_07465387.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732916|emb|CBI14495.1| ribulose-5-phosphate 3-epimerase [Streptococcus gallolyticus UCN34]
gi|304425672|gb|EFM28790.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 220
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 130/198 (65%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ A AG DI+T H ES+ HI +L+ I A G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERYVDAFAQAGADIMTIHAESTLHIHGALQKIKAAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I + K+ + L ++ +EVDGGV + I
Sbjct: 125 IESVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVAKVAQLRDEKGYDFDIEVDGGVDNETI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ AGA++ V GS F
Sbjct: 185 KACYDAGANVFVAGSYLF 202
>gi|152977904|ref|YP_001343533.1| ribulose-phosphate 3-epimerase [Actinobacillus succinogenes 130Z]
gi|150839627|gb|ABR73598.1| Ribulose-phosphate 3-epimerase [Actinobacillus succinogenes 130Z]
Length = 224
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ N+ K GA IHFDVMD +VPN++FGA V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVENVLKCGADLIHFDVMDNHYVPNLTFGAPVCKALREY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM + +DS + A AG ITFH E+S HI R+L+ I G + G+ NP
Sbjct: 60 GITAPIDVHLMATPVDSLVVDFAKAGATSITFHGEASLHIDRTLQLIRDQGCRAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP+ L+ V+D++DMIL+M+VNPGFGGQ I +T+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLNYLDFVMDKLDMILLMSVNPGFGGQSFIPATLDKLRQVRQRIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F+ Y K ++D++
Sbjct: 180 VKIDNIAQIAAAGADMFVAGSAIFDAP---DYQKVIDDMR 216
>gi|108758887|ref|YP_634422.1| ribulose-phosphate 3-epimerase [Myxococcus xanthus DK 1622]
gi|108462767|gb|ABF87952.1| ribulose-phosphate 3-epimerase [Myxococcus xanthus DK 1622]
Length = 219
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ DF RL EE+ I AGA IH DVMDG FVPNI+ G V+ +++ +
Sbjct: 6 VRISPSLLSCDFGRLAEEVRAIEAAGADWIHVDVMDGRFVPNITIGPVVVEAIKRVATKP 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ AG D++T H E+SPH+ R+L+ I G K V +NP TP++
Sbjct: 66 LDVHLMIVEPERYVEAFVKAGADVLTVHVEASPHLHRTLQQIRNAGAKPAVVLNPGTPLS 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+E+V+ ++DM+L+M+VNPGFGGQ IEST+ ++R+ + ++ G + + +EVDGG+ +
Sbjct: 126 AIEEVLGDVDMVLLMSVNPGFGGQSFIESTVERVRRLRGMLDARGLKDVDIEVDGGINAT 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +V+AGA +LV GS F K YA+ + L+
Sbjct: 186 TAKRVVEAGATVLVAGSYVFGSK---DYAEAIRSLR 218
>gi|255101739|ref|ZP_05330716.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-63q42]
Length = 223
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 149/219 (68%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I++ PSIL+ADF++L E++ + AG + +H DVMDG FVPNI+ G V++SL+ + +
Sbjct: 2 IKLAPSILSADFAKLLEDVRKVESAGCEYLHIDVMDGHFVPNITLGPLVVKSLKKENINM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + D +I AGCDIIT H E+ H+ R+++ I + G K GV +NP TPV
Sbjct: 62 VFDAHLMIENPDQYIEEFVKAGCDIITVHQEACVHLHRTIQNIKSHGIKAGVVLNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++ V+ ++DM+L+M+VNPGFGGQ I + KI++ KA+I + +I +EVDGG++ +
Sbjct: 122 DTIKHVLPDLDMVLLMSVNPGFGGQSFIPCVLDKIKELKAIIDSQGLNIDIEVDGGISPK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ +VQAGA+++V GS+ F G + +N +K+A
Sbjct: 182 NVAEVVQAGANIIVAGSAIF---GSDDIQETVNLFRKNA 217
>gi|289548380|ref|YP_003473368.1| ribulose-phosphate 3-epimerase [Thermocrinis albus DSM 14484]
gi|289181997|gb|ADC89241.1| ribulose-phosphate 3-epimerase [Thermocrinis albus DSM 14484]
Length = 222
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 141/219 (64%), Gaps = 2/219 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF RLGE+I + GA +HFDVMDG FVPNISFG V+ S++ + D
Sbjct: 4 LAPSILSADFYRLGEQIEACVRGGADILHFDVMDGLFVPNISFGPVVLESIKKHCPLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I AG +++ H E + HI R++ I ++G K GV INP TP+ +L
Sbjct: 64 AHLMIVEPDRYIRDFVMAGASMVSVHIEGNHHIHRTVELIKSLGAKAGVVINPGTPLHLL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+V+ +D +L+M+VNPGFGGQ I ++ +IRQ K +IG+ S+ +EVDGG+ NI+
Sbjct: 124 EEVLYYVDFVLLMSVNPGFGGQTFIPRSLERIRQLKEMIGRINPSVLIEVDGGIKEDNIR 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ +AGAD+LVVGS F+ + ++L L + A+
Sbjct: 184 LVAEAGADILVVGSGIFSHPDVEAQTRKLKSLLNVSEAV 222
>gi|167625981|ref|YP_001676275.1| ribulose-phosphate 3-epimerase [Shewanella halifaxensis HAW-EB4]
gi|167356003|gb|ABZ78616.1| Ribulose-phosphate 3-epimerase [Shewanella halifaxensis HAW-EB4]
Length = 224
Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 136/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MRPFL-IAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCQALRNY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRIIPDFAAAGASIITFHPEASEHVDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST K+RQ + LI I L+VDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTFDKLRQVRKLIDDSGYDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ FN+
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNK 205
>gi|157148969|ref|YP_001456288.1| ribulose-phosphate 3-epimerase [Citrobacter koseri ATCC BAA-895]
gi|157086174|gb|ABV15852.1| hypothetical protein CKO_04807 [Citrobacter koseri ATCC BAA-895]
Length = 225
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRKYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPHTLEKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|116628485|ref|YP_821104.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus LMD-9]
gi|116101762|gb|ABJ66908.1| ribulose-5-phosphate 3-epimerase [Streptococcus thermophilus LMD-9]
Length = 219
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 134/214 (62%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ I +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 2 SYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H E++ HI +++ I A G K GV INP TPV
Sbjct: 62 VFDCHLMVVDPERYVTAYAQAGADIMTIHVEATKHIHGAIQKIKAAGMKAGVVINPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
L V+ +D +LIMTVNPGFGGQ I + K+ Q L G S +EVDGGV ++
Sbjct: 122 EALIPVLALVDQVLIMTVNPGFGGQTFIPEMMSKVEQVVELRQKGGYSFDIEVDGGVDNK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 182 TIAACAKAGANVFVAGSYLFKNHDLTAQVQTLRD 215
>gi|90407246|ref|ZP_01215433.1| Pentose-5-phosphate-3-epimerase [Psychromonas sp. CNPT3]
gi|90311669|gb|EAS39767.1| Pentose-5-phosphate-3-epimerase [Psychromonas sp. CNPT3]
Length = 226
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLG+++ + + GA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGDDVKKVLQDGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG IITFHPE+S H+ RSL+ I G K G+ +NP T + +
Sbjct: 66 DVHLMVKPVDTMIVDFAKAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVLNPATSLEV 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L V+D++D+IL+M+VNPGFGGQ I T+ K+R K LI R I L+VDGGV NI
Sbjct: 126 LTHVMDKLDVILLMSVNPGFGGQSFIPHTLDKLRAVKKLIQASGRDIRLQVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ FN+
Sbjct: 186 QEIAEAGADMFVAGSAIFNE 205
>gi|262401914|ref|ZP_06078479.1| ribulose-phosphate 3-epimerase [Vibrio sp. RC586]
gi|262351886|gb|EEZ01017.1| ribulose-phosphate 3-epimerase [Vibrio sp. RC586]
Length = 224
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFISHTLDKLRAVRERIKQSGRPIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|293393372|ref|ZP_06637684.1| ribulose-phosphate 3-epimerase [Serratia odorifera DSM 4582]
gi|291424109|gb|EFE97326.1| ribulose-phosphate 3-epimerase [Serratia odorifera DSM 4582]
Length = 225
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V ++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTANVLTAGADVVHFDVMDNHYVPNLTIGPMVCQALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG I+FHPE+S H+ R+++ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASYISFHPEASEHVDRTIQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+ID+IL+M+VNPGFGGQ I T+ K+RQ + LI R I LEVDGGV NI
Sbjct: 126 LDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDSGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ F +
Sbjct: 186 AEIAAAGADMFVAGSAIFGK 205
>gi|332558220|ref|ZP_08412542.1| ribulose-phosphate 3-epimerase [Rhodobacter sphaeroides WS8N]
gi|332275932|gb|EGJ21247.1| ribulose-phosphate 3-epimerase [Rhodobacter sphaeroides WS8N]
Length = 236
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 129/198 (65%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R + V
Sbjct: 7 IKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIKGV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G+K G+A+NP T +
Sbjct: 67 MDVHLMIAPVDPYIEAFAAAGADVITAHLEAGPHIHRTLQAIRGTGRKAGLALNPGTGLD 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D +D++ IMTVNPGFGGQ+ I S + K+R +A+IG R I +E+DGGVT
Sbjct: 127 AVSHLLDLLDLVCIMTVNPGFGGQKFIASQVDKVRDLRAMIGDRPIHIEIDGGVTPETAP 186
Query: 185 SLVQAGADLLVVGSSFFN 202
+ AGAD+LV GS+ F
Sbjct: 187 LVAAAGADVLVAGSAVFK 204
>gi|221639193|ref|YP_002525455.1| Ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides KD131]
gi|221159974|gb|ACM00954.1| Ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides KD131]
Length = 236
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 129/198 (65%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R + V
Sbjct: 7 IKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIKGV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G+K G+A+NP T +
Sbjct: 67 MDVHLMIAPVDPYIEAFAAAGADVITAHLEAGPHIHRTLQAIRGTGRKAGLALNPGTGLD 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D +D++ IMTVNPGFGGQ+ I S + K+R +A+IG R I +E+DGGVT
Sbjct: 127 AVSHLLDLLDLVCIMTVNPGFGGQKFIASQVDKVRDLRAMIGDRPIHIEIDGGVTPETAP 186
Query: 185 SLVQAGADLLVVGSSFFN 202
+ AGAD+LV GS+ F
Sbjct: 187 LVAAAGADVLVAGSAVFK 204
>gi|126209282|ref|YP_001054507.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
L20]
gi|303251154|ref|ZP_07337338.1| D-ribulose-phosphate-3 epimerase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303252697|ref|ZP_07338859.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307246750|ref|ZP_07528818.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307248891|ref|ZP_07530902.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251425|ref|ZP_07533339.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253504|ref|ZP_07535374.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255734|ref|ZP_07537537.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260186|ref|ZP_07541895.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|126098074|gb|ABN74902.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302648436|gb|EFL78630.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650005|gb|EFL80177.1| D-ribulose-phosphate-3 epimerase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852325|gb|EFM84562.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306854586|gb|EFM86778.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856509|gb|EFM88651.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859005|gb|EFM91048.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861294|gb|EFM93285.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865731|gb|EFM97610.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 224
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE+++ + KAG IHFDVMD FVPN++FG + ++LR Y +
Sbjct: 8 IAPSILSADLARLGEDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRDYGITAEI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ I A AG + ITFHPE++ HI R+L+ I G K+G+ NP TP++
Sbjct: 68 DVHLMVKPVERLIPDFAKAGANYITFHPEATDHIDRTLQMIRDHGCKSGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+++A+ I K I LE+DGGV NI
Sbjct: 128 LDYVMDKVDMILLMGVNPGFGGQKFIPATLEKLQEARRRIDKSGYPIRLEIDGGVKIDNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD V GS+ F+Q
Sbjct: 188 AEIAAAGADTFVAGSAIFDQ 207
>gi|73542705|ref|YP_297225.1| ribulose-phosphate 3-epimerase [Ralstonia eutropha JMP134]
gi|72120118|gb|AAZ62381.1| ribulose-5-phosphate 3-epimerase [Ralstonia eutropha JMP134]
Length = 233
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP+ +I PSIL+ADF+RLGEE+ +T+AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 TPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHV 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG +IITFHPE+S H+ RSL I G + G+ NP T
Sbjct: 63 TAPIDVHLMVRPVDRIIPDFAKAGANIITFHPEASEHVDRSLALIRDNGCQAGLVFNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ V+D +D+IL+M+VNPGFGGQ I T+ K+R + I R I LEVD
Sbjct: 123 PLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDAYTERTGRKILLEVD 182
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GGV NI + AGAD V GS+ F +
Sbjct: 183 GGVKVDNIAEIAAAGADTFVAGSAVFGK 210
>gi|260770887|ref|ZP_05879816.1| ribulose-phosphate 3-epimerase [Vibrio furnissii CIP 102972]
gi|260614124|gb|EEX39314.1| ribulose-phosphate 3-epimerase [Vibrio furnissii CIP 102972]
gi|315178931|gb|ADT85845.1| ribulose-phosphate 3-epimerase [Vibrio furnissii NCTC 11218]
Length = 223
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP T ++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPATSLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDDSGRDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ F Q
Sbjct: 186 REIAAAGADMFVAGSAIFGQ 205
>gi|188535315|ref|YP_001909112.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Erwinia tasmaniensis Et1/99]
gi|188030357|emb|CAO98248.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Erwinia tasmaniensis Et1/99]
Length = 228
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTARALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ +NP TP++I
Sbjct: 66 DVHLMVKPVDRLVPDFAKAGASYITFHPEASEHVDRTLQLIREHGCKAGLVLNPATPLSI 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + I I LEVDGGV + NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPGTLNKLRQVRERIDHSGYDIRLEVDGGVKADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G +Y K ++D++
Sbjct: 186 GEIAAAGADMFVAGSAIF---GHPNYKKVIDDMR 216
>gi|254455820|ref|ZP_05069249.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082822|gb|EDZ60248.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 219
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 146/217 (67%), Gaps = 5/217 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
IQI PSIL+ADFS+LG EI + + GA IH DVMDG FVPN++ G VI++LR D
Sbjct: 3 KIQISPSILSADFSQLGVEIKRLEEGGADMIHVDVMDGHFVPNLTIGPPVIKALRKQCDL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMIS + +I ADAG DIIT HPE++ ++ S+ I + KK GV++NPE+ +
Sbjct: 63 KFDVHLMISPVHKYIESYADAGADIITIHPEATDNLEASILKIRELNKKVGVSLNPESKI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+++ +D+ID+ILIM+VNPGFGGQ+ + + KI++ K + ++ +E+DGG+
Sbjct: 123 DLIKGFLDKIDLILIMSVNPGFGGQKFMPEVLEKIKELKKIQNNNNLDFDIEIDGGINFD 182
Query: 182 NIKSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLK 217
N K ++AGA++LV G++ F + G+I K +N LK
Sbjct: 183 NCKDAIEAGANILVSGTTIFKSNNGDIK--KNINLLK 217
>gi|190151175|ref|YP_001969700.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307257919|ref|ZP_07539673.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307262313|ref|ZP_07543961.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307264524|ref|ZP_07546108.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189916306|gb|ACE62558.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306863566|gb|EFM95495.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867976|gb|EFM99804.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870123|gb|EFN01883.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 224
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE+++ + KAG IHFDVMD FVPN++FG + ++LR Y +
Sbjct: 8 IAPSILSADLARLGEDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRDYGITAEI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ I A AG + ITFHPE++ HI R+L+ I G K+G+ NP TP++
Sbjct: 68 DVHLMVKPVERLIPDFAKAGANYITFHPEATNHIDRTLQMIRDHGCKSGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+++A+ I K I LE+DGGV NI
Sbjct: 128 LDYVMDKVDMILLMGVNPGFGGQKFIPATLEKLQEARRRIDKSGYPIRLEIDGGVKIDNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD V GS+ F+Q
Sbjct: 188 AEIAAAGADTFVAGSAIFDQ 207
>gi|167582459|ref|ZP_02375333.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis TXDOH]
gi|167620551|ref|ZP_02389182.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis Bt4]
gi|257137808|ref|ZP_05586070.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis E264]
Length = 228
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 140/226 (61%), Gaps = 9/226 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D++LIM+VNPGFGGQ I + K+R A+A I R I LE+DGG
Sbjct: 123 NYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLRAARARIDAYTARTGREIHLEIDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI + AGAD V GS+ F G+ Y + + +++ + A+
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRQVIGEMRDALAAV 225
>gi|119509054|ref|ZP_01628205.1| ribulose-phosphate 3-epimerase [Nodularia spumigena CCY9414]
gi|119466220|gb|EAW47106.1| ribulose-phosphate 3-epimerase [Nodularia spumigena CCY9414]
Length = 235
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 10 IVISPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVTTKP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GKK GV +NP TP
Sbjct: 70 LDVHLMIVEPEKYVEDFAKAGADIISVHCEHNASPHLHRTLGQIRELGKKAGVVLNPGTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++E V+D D+ILIM+VNPGFGGQ I +PKIRQ + + +R + +EVDGG+ +
Sbjct: 130 LVLIEHVLDLCDLILIMSVNPGFGGQSFIPGVLPKIRQLRQMCDERGLDPWIEVDGGLKA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ F YA+ ++ ++ S
Sbjct: 190 NNTWQVLEAGANAIVAGSAVFKAP---DYAEAVSSIRNS 225
>gi|311103563|ref|YP_003976416.1| ribulose-phosphate 3-epimerase [Achromobacter xylosoxidans A8]
gi|310758252|gb|ADP13701.1| ribulose-phosphate 3-epimerase [Achromobacter xylosoxidans A8]
Length = 242
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 137/218 (62%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+ADF+RLGEE+ N+ AGA IH DVMD +VPN++ G V ++R +
Sbjct: 15 STRITPSILSADFARLGEEVRNVVAAGADWIHVDVMDNHYVPNLTIGPMVCAAIRPHVQV 74
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + + A AG D I+FHP++S H+ R+L I G K G+ NP TP+
Sbjct: 75 PIDVHLMVEPVDDLVPMFAKAGADYISFHPDASRHVDRTLSLIRENGCKAGLVFNPATPL 134
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
+ L+ V+D+ID+ILIM+VNPGFGGQ I + K+R+A+A I G + I L+VDGG
Sbjct: 135 SYLDYVMDKIDLILIMSVNPGFGGQSFIPGALTKLREARARIDAWMQAGGQEIVLQVDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + +AGAD V GS+ F + K + D
Sbjct: 195 VKIDNIAEIRRAGADTFVAGSAIFGKPDYAGIIKSMRD 232
>gi|220907411|ref|YP_002482722.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7425]
gi|219864022|gb|ACL44361.1| Ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7425]
Length = 238
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 145/223 (65%), Gaps = 7/223 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
++ S+ I PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R
Sbjct: 4 LSKSVVIAPSILSADFSRLGEEIRAVDQAGADWIHVDVMDGRFVPNITIGPLIVEAIRPV 63
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAIN 118
+ D HLMI + ++ A AG DII+ H ESS H+ R+L I +GK+ GV +N
Sbjct: 64 TTKPLDVHLMIVEPERYVADFAKAGADIISVHAESSATIHLHRTLCQIKELGKQAGVVLN 123
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P +P+ ++E V++ D+ILIM+VNPGFGGQ I S +PKIRQ + + +R + +EVDG
Sbjct: 124 PASPLELIEYVLEVCDLILIMSVNPGFGGQGFISSVVPKIRQLRQMCDERGLDPWIEVDG 183
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ + N +++AGA+ +V GS+ FN YA + ++ S
Sbjct: 184 GLKANNTWQVLEAGANAIVAGSAVFNAP---DYATAIAGIRNS 223
>gi|126462198|ref|YP_001043312.1| ribulose-phosphate 3-epimerase [Rhodobacter sphaeroides ATCC 17029]
gi|126103862|gb|ABN76540.1| ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides ATCC
17029]
Length = 236
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 129/198 (65%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R + V
Sbjct: 7 IKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIKGV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G+K G+A+NP T +
Sbjct: 67 MDVHLMIAPVDPYIEAFAAAGADVITAHLEAGPHIHRTLQAIRGTGRKAGLALNPGTGLD 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D +D++ IMTVNPGFGGQ+ I S + K+R +A+IG R I +E+DGGVT
Sbjct: 127 AVSHLLDLLDLVCIMTVNPGFGGQKFIASQVDKVRDLRAMIGDRPIHIEIDGGVTPETAP 186
Query: 185 SLVQAGADLLVVGSSFFN 202
+ AGAD+LV GS+ F
Sbjct: 187 LVAAAGADVLVAGSAVFK 204
>gi|283797839|ref|ZP_06346992.1| ribulose-phosphate 3-epimerase [Clostridium sp. M62/1]
gi|291074527|gb|EFE11891.1| ribulose-phosphate 3-epimerase [Clostridium sp. M62/1]
gi|295091948|emb|CBK78055.1| ribulose-phosphate 3-epimerase [Clostridium cf. saccharolyticum
K10]
Length = 219
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 141/210 (67%), Gaps = 4/210 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL ADFS LGE+I + +AGA+ IH DVMDG FVP+ISFG VI+ LR ++ V
Sbjct: 2 IRLAPSILGADFSHLGEQIQTVDEAGAQYIHLDVMDGAFVPSISFGMPVIQRLRPLTERV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ ++ + AG D+I H E+ H+ R++ I +G K VA+NP TPV+
Sbjct: 62 FDVHMMVEEPGRYVEDMKKAGADLICVHQEACCHLDRTVNQIKELGLKAAVALNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
L ++ EIDM LIM+VNPGFGGQ+ I T+ K+R+ + + +R + L +VDGGV N
Sbjct: 122 TLSCILGEIDMALIMSVNPGFGGQKFIPYTLEKVRELRRMSDERGLDLDIQVDGGVGLDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
++ +++AGA+++V GS+ F KG+ + R
Sbjct: 182 VRQVIEAGANVIVAGSAVF--KGDAAANTR 209
>gi|261211194|ref|ZP_05925483.1| ribulose-phosphate 3-epimerase [Vibrio sp. RC341]
gi|260839695|gb|EEX66306.1| ribulose-phosphate 3-epimerase [Vibrio sp. RC341]
Length = 224
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|83720157|ref|YP_443414.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis E264]
gi|83653982|gb|ABC38045.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis E264]
Length = 243
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 140/226 (61%), Gaps = 9/226 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 18 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 77
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP TP+
Sbjct: 78 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPL 137
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D++LIM+VNPGFGGQ I + K+R A+A I R I LE+DGG
Sbjct: 138 NYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLRAARARIDAYTARTGREIHLEIDGG 197
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI + AGAD V GS+ F G+ Y + + +++ + A+
Sbjct: 198 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRQVIGEMRDALAAV 240
>gi|238758718|ref|ZP_04619892.1| Ribulose-phosphate 3-epimerase [Yersinia aldovae ATCC 35236]
gi|238703015|gb|EEP95558.1| Ribulose-phosphate 3-epimerase [Yersinia aldovae ATCC 35236]
Length = 225
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + AGAD+ V GS+ FNQ YA + D +S LA+
Sbjct: 186 RDIAAAGADMFVAGSAIFNQP---DYAAVI-DAMRSELAM 221
>gi|78065099|ref|YP_367868.1| ribulose-phosphate 3-epimerase [Burkholderia sp. 383]
gi|77965844|gb|ABB07224.1| ribulose-5-phosphate 3-epimerase [Burkholderia sp. 383]
Length = 228
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 141/225 (62%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F G+ Y ++++ ++ALA
Sbjct: 183 VKTDNIAEIAAAGADTFVAGSAIF---GKPDYRTVIDEM-RAALA 223
>gi|56419713|ref|YP_147031.1| ribulose-phosphate 3-epimerase [Geobacillus kaustophilus HTA426]
gi|56379555|dbj|BAD75463.1| ribulose-phosphate 3-epimerase [Geobacillus kaustophilus HTA426]
Length = 220
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 140/214 (65%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RL EEI ++ + GA IH D+MDG FVPN++FG V+ ++R +
Sbjct: 4 IRIAPSILSADFARLAEEIRSVEEGGADWIHVDIMDGHFVPNLTFGPPVVAAIRPVTKLP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D +I A AG D+I+ H E+ H+ R++ I G K GV +NP TPV
Sbjct: 64 LDVHLMIADPDRYIPAFAKAGADVISVHVEACVHLHRTIHFIKEQGVKAGVVLNPHTPVE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ VI ++D++L+MTVNPGFGGQ I + +PKIR+ + + + + +EVDGG+ +
Sbjct: 124 MIRHVIGDVDLVLLMTVNPGFGGQAFIPAVVPKIREVARMASEQNKEVDIEVDGGINAET 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
V+AGA++LV GS+ +N++ + + L ++
Sbjct: 184 APLCVEAGANVLVAGSAIYNERDRAAAIRTLREV 217
>gi|297530647|ref|YP_003671922.1| ribulose-phosphate 3-epimerase [Geobacillus sp. C56-T3]
gi|297253899|gb|ADI27345.1| ribulose-phosphate 3-epimerase [Geobacillus sp. C56-T3]
Length = 218
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RL EEI ++ + GA IH D+MDG FVPN++FG V+ ++R +
Sbjct: 2 IRIAPSILSADFARLAEEIRSVEEGGADWIHVDIMDGHFVPNLTFGPPVVAAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D +I A AG D+I+ H E+ H+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIADPDRYIPAFAKAGADVISVHVEACVHLHRTIHFIKEQGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ VI ++D++L+MTVNPGFGGQ I + +PKIR+ + + + + +EVDGG+ +
Sbjct: 122 MIRHVIGDVDLVLLMTVNPGFGGQAFIPAVVPKIREVARMASEQNKEVDIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ V+AGA++LV GS+ +N++ + + L
Sbjct: 182 ARLCVEAGANVLVAGSAIYNERDRAAAIRTL 212
>gi|170767071|ref|ZP_02901524.1| ribulose-phosphate 3-epimerase [Escherichia albertii TW07627]
gi|170124509|gb|EDS93440.1| ribulose-phosphate 3-epimerase [Escherichia albertii TW07627]
Length = 225
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREARRRIDDSGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|291286379|ref|YP_003503195.1| ribulose-phosphate 3-epimerase [Denitrovibrio acetiphilus DSM
12809]
gi|290883539|gb|ADD67239.1| ribulose-phosphate 3-epimerase [Denitrovibrio acetiphilus DSM
12809]
Length = 213
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 135/213 (63%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADFS L EI I + GA IH D+MDG FVPNI+FGA VI+SLR ++ FD
Sbjct: 3 VAPSVLSADFSILASEIKAIDEGGADWIHLDIMDGMFVPNITFGAPVIKSLRKCTEKTFD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I ADAGCD IT H E+ H+ R++ I GKK GV++NP T + +
Sbjct: 63 AHLMIEAPDRYIKDFADAGCDFITVHEEACTHLHRTVSLIKEYGKKAGVSLNPATSLETV 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
+++ +DM+LIM+VNPGFGGQ+ I + KI + K + + + L +VDGGV ++NI
Sbjct: 123 REILPYVDMVLIMSVNPGFGGQKFIPTIYDKISRLKKMTEELNPELIIQVDGGVNNQNIN 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AG +V GS F G Y K +N LK
Sbjct: 183 DLKNAGCSCVVAGSYVF---GCDDYKKAINSLK 212
>gi|126700194|ref|YP_001089091.1| ribulose-phosphate 3-epimerase [Clostridium difficile 630]
gi|254976166|ref|ZP_05272638.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-66c26]
gi|255093556|ref|ZP_05323034.1| ribulose-phosphate 3-epimerase [Clostridium difficile CIP 107932]
gi|255307608|ref|ZP_05351779.1| ribulose-phosphate 3-epimerase [Clostridium difficile ATCC 43255]
gi|255315299|ref|ZP_05356882.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-76w55]
gi|255517967|ref|ZP_05385643.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-97b34]
gi|255651083|ref|ZP_05397985.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-37x79]
gi|260684148|ref|YP_003215433.1| ribulose-phosphate 3-epimerase [Clostridium difficile CD196]
gi|260687807|ref|YP_003218941.1| ribulose-phosphate 3-epimerase [Clostridium difficile R20291]
gi|306520936|ref|ZP_07407283.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-32g58]
gi|115251631|emb|CAJ69464.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Clostridium difficile]
gi|260210311|emb|CBA64627.1| ribulose-phosphate 3-epimerase [Clostridium difficile CD196]
gi|260213824|emb|CBE05804.1| ribulose-phosphate 3-epimerase [Clostridium difficile R20291]
Length = 223
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 149/219 (68%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I++ PSIL+ADF++L E++ + AG + +H DVMDG FVPNI+ G V++SL+ + +
Sbjct: 2 IKLAPSILSADFAKLLEDVRKVESAGCEYLHIDVMDGHFVPNITLGPLVVKSLKKENINM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + D +I AGCDIIT H E+ H+ R+++ I + G K GV +NP TPV
Sbjct: 62 VFDAHLMIENPDQYIEEFVKAGCDIITVHQEACVHLHRTIQNIKSHGIKAGVVLNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++ V+ ++DM+L+M+VNPGFGGQ I + KI++ KA+I + +I +EVDGG++ +
Sbjct: 122 DTIKHVLPDLDMVLLMSVNPGFGGQSFIPCVLDKIKELKAIIDSQGLNIDIEVDGGISPK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ +VQAGA+++V GS+ F G + +N +K+A
Sbjct: 182 NVAEVVQAGANVIVAGSAIF---GSDDIQETVNLFRKNA 217
>gi|115350495|ref|YP_772334.1| ribulose-phosphate 3-epimerase [Burkholderia ambifaria AMMD]
gi|170700449|ref|ZP_02891456.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria IOP40-10]
gi|172059526|ref|YP_001807178.1| ribulose-phosphate 3-epimerase [Burkholderia ambifaria MC40-6]
gi|115280483|gb|ABI86000.1| ribulose-5-phosphate 3-epimerase [Burkholderia ambifaria AMMD]
gi|170134661|gb|EDT02982.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria IOP40-10]
gi|171992043|gb|ACB62962.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria MC40-6]
Length = 228
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 141/225 (62%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F G+ Y ++++ ++ALA
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRTVIDEM-RAALA 223
>gi|282898047|ref|ZP_06306042.1| Ribulose-phosphate 3-epimerase [Raphidiopsis brookii D9]
gi|282899634|ref|ZP_06307598.1| Ribulose-phosphate 3-epimerase [Cylindrospermopsis raciborskii
CS-505]
gi|281195513|gb|EFA70446.1| Ribulose-phosphate 3-epimerase [Cylindrospermopsis raciborskii
CS-505]
gi|281197191|gb|EFA72092.1| Ribulose-phosphate 3-epimerase [Raphidiopsis brookii D9]
Length = 236
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 144/219 (65%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+A+FSRLGE+I + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 10 IVIAPSILSANFSRLGEDIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVTTKP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP TP
Sbjct: 70 LDVHLMIVEPEKYVEGFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNPGTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++E V++ D++LIM+VNPGFGGQ I S +PKIRQ + + ++ + +EVDGG+ +
Sbjct: 130 LQLIEYVLELCDLVLIMSVNPGFGGQSFIPSVVPKIRQLRQMCDEKGLDPWIEVDGGLKA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN YA+ + +++ S
Sbjct: 190 NNTWQVLEAGANAIVAGSAVFNAP---DYAQAIENIRHS 225
>gi|331269678|ref|YP_004396170.1| Ribulose-phosphate 3-epimerase [Clostridium botulinum BKT015925]
gi|329126228|gb|AEB76173.1| Ribulose-phosphate 3-epimerase [Clostridium botulinum BKT015925]
Length = 216
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 147/216 (68%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFS+LGE+I ++ K GA IH DVMDG FVPNISFG +++S+R+ +
Sbjct: 2 VKLAPSILSADFSKLGEDIKSLDKYGADMIHIDVMDGMFVPNISFGIPIMKSIRNITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A +G DIIT H E+ H+ R++ I + G K GVAINP TP+
Sbjct: 62 FDVHLMIEDPARYIEDFAKSGADIITVHYEADKHLDRTVNYIKSFGVKAGVAINPATPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I DM+LIM+VNPGFGGQ+ I KI++ KA+ K + + ++VDGGV N
Sbjct: 122 SIKHIIPIADMVLIMSVNPGFGGQKYINYCSEKIKEVKAIAEKFNKDLLIQVDGGVGINN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V++GA+++V GS+ F + GEI K + +LK+
Sbjct: 182 IKHVVESGANVIVAGSAVF-KNGEIE--KNIKELKE 214
>gi|332163306|ref|YP_004299883.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607795|emb|CBY29293.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667536|gb|ADZ44180.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861912|emb|CBX72082.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica W22703]
Length = 225
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K++Q + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLKQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+++ AGAD+ V GS+ FNQ
Sbjct: 186 RAIAAAGADMFVAGSAIFNQ 205
>gi|238026113|ref|YP_002910344.1| ribulose-phosphate 3-epimerase [Burkholderia glumae BGR1]
gi|237875307|gb|ACR27640.1| Ribulose-phosphate 3-epimerase [Burkholderia glumae BGR1]
Length = 228
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 137/222 (61%), Gaps = 9/222 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANVISFHPEGSDHIDRTLSLIKDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDLVLIMSVNPGFGGQSFIPEALRKVREARAKIDAYRERTGREIHLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI + AGAD V GS+ F G+ Y +++++ S
Sbjct: 183 VKVDNIAEIAAAGADTFVAGSAIF---GKPDYRAVIDEMRAS 221
>gi|290968501|ref|ZP_06560040.1| ribulose-phosphate 3-epimerase [Megasphaera genomosp. type_1 str.
28L]
gi|290781497|gb|EFD94086.1| ribulose-phosphate 3-epimerase [Megasphaera genomosp. type_1 str.
28L]
Length = 215
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 135/201 (67%), Gaps = 3/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+ADF++L EEI ++ K GA+ IH D+MDG FVPN++FG V++++R Y+
Sbjct: 2 ITVCPSILSADFAKLAEEIQDVEKKGARCIHLDLMDGHFVPNLTFGIPVVQAVRKYTQLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ +++I+ +A AG +T H E+ H+ R L+ IH K GVA+NP TPV
Sbjct: 62 FDAHLMVEHPETYIDGLAAAGVTYVTVHQEACVHLDRVLQAIHDAHMKAGVALNPATPVT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
LE V ++D+ILIM+VNPGFGGQ+ + + KI+QA+AL+ G +++VDGG+ +
Sbjct: 122 TLEWVAAQVDLILIMSVNPGFGGQRFLPYAVEKIKQARALLDASGNTCAAVQVDGGINRK 181
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
S+ AGA LV GS+ F
Sbjct: 182 TAPSVKAAGATFLVAGSAIFG 202
>gi|270264421|ref|ZP_06192687.1| ribulose-phosphate 3-epimerase [Serratia odorifera 4Rx13]
gi|270041557|gb|EFA14655.1| ribulose-phosphate 3-epimerase [Serratia odorifera 4Rx13]
Length = 225
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ +N+ AG +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG + I+FHPE+S H+ R+++ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGANYISFHPEASEHVDRTIQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI R I LEVDGGV NI
Sbjct: 126 LDYVMDKVDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDSGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G+ Y K +++++
Sbjct: 186 AEIAAAGADMFVAGSAIF---GKPDYRKVIDEMR 216
>gi|308804970|ref|XP_003079797.1| GLUCOSE INHIBITED DIVISION PROTEIN A (ISS) [Ostreococcus tauri]
gi|116058254|emb|CAL53443.1| GLUCOSE INHIBITED DIVISION PROTEIN A (ISS) [Ostreococcus tauri]
Length = 920
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 140/202 (69%), Gaps = 4/202 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI + PSIL+A+F++LGEEI I KAGA+ +H DVMDG FVPNI+ G V+ ++R +D
Sbjct: 44 SIIVSPSILSANFAKLGEEIEAIDKAGAEWVHVDVMDGRFVPNITIGPLVVDAIRPVTDK 103
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPET 121
V DCHLMI + + A AG DII+ H E + H+ R++ I +G K GV +NP T
Sbjct: 104 VLDCHLMIVEPELRVADFAKAGADIISVHAEGAATIHLHRTINQIKDLGCKAGVVLNPGT 163
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+++L+ +I+E+D+IL+M+VNPGFGGQ IES + KI + KA+ + ++ +EVDGGV+
Sbjct: 164 PISVLDYIIEEVDLILVMSVNPGFGGQSFIESQVEKIAKIKAMCDAKGVNPWIEVDGGVS 223
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
N +++AGA+ LV GS+ F
Sbjct: 224 PANAYKVIEAGANALVAGSAVF 245
>gi|254489785|ref|ZP_05102980.1| ribulose-phosphate 3-epimerase [Methylophaga thiooxidans DMS010]
gi|224464870|gb|EEF81124.1| ribulose-phosphate 3-epimerase [Methylophaga thiooxydans DMS010]
Length = 230
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
+I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 3 EFKIAPSILSADFARLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCDALRKHGVT 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D I A AG ITFHPE+S HI RSL+ + A G KTG+ NP TP
Sbjct: 63 HEIDVHLMVKPVDRIIPDFAKAGASFITFHPEASEHIDRSLQLVKAEGCKTGLVFNPATP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+++ E V+D++D IL+M+VNPGFGGQ+ I T+ K++QA+ LI I LE+DGGV
Sbjct: 123 LSLAEHVLDKVDRILLMSVNPGFGGQKFIPHTLDKLQQARKLIDASGYDIDLEIDGGVNV 182
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
NI+ + +AGA V GS+ F
Sbjct: 183 NNIREIAEAGARTFVAGSAVF 203
>gi|262170439|ref|ZP_06038117.1| ribulose-phosphate 3-epimerase [Vibrio mimicus MB-451]
gi|261891515|gb|EEY37501.1| ribulose-phosphate 3-epimerase [Vibrio mimicus MB-451]
Length = 224
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|307545970|ref|YP_003898449.1| ribulose-5-phosphate 3-epimerase [Halomonas elongata DSM 2581]
gi|307217994|emb|CBV43264.1| ribulose-5-phosphate 3-epimerase [Halomonas elongata DSM 2581]
Length = 232
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 141/223 (63%), Gaps = 6/223 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS- 61
P I PSIL+ADF+RLGEE+ ++ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 6 PDYLIAPSILSADFARLGEEVDDVLASGADIVHFDVMDNHYVPNLTIGPMVCEALRRHGV 65
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I DAG +TFHPE+S HI RSL+ I G K+G+ NP T
Sbjct: 66 TAPIDAHLMVKPVDRLIGDFIDAGASYVTFHPEASEHIDRSLQLIRDGGCKSGLVFNPAT 125
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVT 179
P++ L+ V+D++DMIL+M+VNPGFGGQ + T+ K+R+A+ I R I LE+DGGV
Sbjct: 126 PLSFLDHVMDKVDMILLMSVNPGFGGQSFLPGTLDKLREARRRIDASGRDIRLEIDGGVK 185
Query: 180 SRNIKSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLKKS 219
NI + +AGAD V GS+ F N + Y + D +++
Sbjct: 186 IDNIAEIARAGADTFVAGSAVFKARNPEDPHRYDGVIEDFRRA 228
>gi|255020283|ref|ZP_05292351.1| Ribulose-phosphate 3-epimerase [Acidithiobacillus caldus ATCC
51756]
gi|254970203|gb|EET27697.1| Ribulose-phosphate 3-epimerase [Acidithiobacillus caldus ATCC
51756]
Length = 219
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 141/199 (70%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ + +AGA IH DVMD FVPN++ G V++++R ++
Sbjct: 5 KISPSILSADFARLGEEVRAVDEAGADYIHVDVMDNHFVPNLTIGPVVVQAIRPHTQKPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ +D+ I A AG +IIT HPE++ H+ RS++ I ++G K GV++NP TP+++
Sbjct: 65 DVHLMITPVDAIIPEFAKAGANIITVHPEATIHLDRSIQLIKSLGCKAGVSLNPATPLSV 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ +++ ID++L+M+VNPGFGGQ I+ ++ KI + I ++I LEVDGGV N+
Sbjct: 125 LDYILESIDLVLVMSVNPGFGGQSFIDYSLRKIEAIRKRIDATGKAIELEVDGGVKVDNV 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ + AGAD+ V GS+ +N
Sbjct: 185 RRVADAGADVFVAGSAIYN 203
>gi|295094729|emb|CBK83820.1| ribulose-phosphate 3-epimerase [Coprococcus sp. ART55/1]
Length = 220
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 134/199 (67%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PS+L+ DF+ + I+ + +A +H DVMDG FVPNISFGA VI+ LR ++ +
Sbjct: 2 IILSPSLLSVDFAHIAYGIAELDRAKVPALHLDVMDGAFVPNISFGAPVIKCLRKETNMI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D ++ AG D +T H ES H+ R++ IH +G K GVA+NP TPV+
Sbjct: 62 FDVHLMIEEPDRYLEDFKKAGADWVTVHAESCKHLHRTVARIHELGMKAGVALNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+L+ VID++DM+L+M+VNPGFGGQ I S + K+ + + + R + L EVDGGV +N
Sbjct: 122 VLDYVIDDLDMVLVMSVNPGFGGQSFIPSALRKVAEVRKMADDRGLELNIEVDGGVNLKN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
+ +++AGA+++V GS+ F
Sbjct: 182 VGDVIEAGANVIVAGSAVF 200
>gi|258620500|ref|ZP_05715538.1| Ribulose-phosphate 3-epimerase [Vibrio mimicus VM573]
gi|258587379|gb|EEW12090.1| Ribulose-phosphate 3-epimerase [Vibrio mimicus VM573]
Length = 224
Score = 194 bits (494), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|290581124|ref|YP_003485516.1| putative ribulose-phosphate-3-epimerase [Streptococcus mutans
NN2025]
gi|254998023|dbj|BAH88624.1| putative ribulose-phosphate-3-epimerase [Streptococcus mutans
NN2025]
Length = 219
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 131/200 (65%), Gaps = 2/200 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSILAAD++ E+ I + G K +H D+MDG FVP+ISFGA V+ S+R +S VF
Sbjct: 5 QIAPSILAADYANFESELKRIEETGVKYVHIDIMDGQFVPSISFGAGVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ + AG DI+T H E++ HI +L+ I A G K G+ INP TPVA
Sbjct: 65 DCHLMVVNPERYVDDFSQAGADIMTVHVEATHHIHGALQKIKAAGMKAGIVINPGTPVAD 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE V+ D ILIMTVNPGFGGQ I + K+R L ++ +S +EVDGG+ + I
Sbjct: 125 LESVLSLADQILIMTVNPGFGGQAFIPEMLEKVRTVAKLREEKGLSFDIEVDGGIDNETI 184
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K QAGA++ V GS F +
Sbjct: 185 KLAKQAGANIFVAGSYLFKE 204
>gi|186681977|ref|YP_001865173.1| ribulose-phosphate 3-epimerase [Nostoc punctiforme PCC 73102]
gi|186464429|gb|ACC80230.1| ribulose-phosphate 3-epimerase [Nostoc punctiforme PCC 73102]
Length = 235
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 143/219 (65%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 10 IVISPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLIVEAIRPVTTKP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GKK GV +NP +P
Sbjct: 70 LDVHLMIVEPEKYVEGFAKAGADIISVHCEHNASPHLHRTLGQIKELGKKAGVVLNPGSP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++E V+D D++LIM+VNPGFGGQ I +PKIR+ + + +R + +EVDGG+ +
Sbjct: 130 LELIEYVLDLCDLVLIMSVNPGFGGQSFIPGVLPKIRKLRQMCDERGLDPWIEVDGGLKA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN K YA+ + ++ S
Sbjct: 190 NNTWQVLEAGANAIVAGSAVFNAK---DYAEAITSIRNS 225
>gi|325695465|gb|EGD37365.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK150]
Length = 219
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 139/208 (66%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFEAELRKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
++++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EVVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|171318009|ref|ZP_02907181.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria MEX-5]
gi|171096795|gb|EDT41672.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria MEX-5]
Length = 228
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 138/222 (62%), Gaps = 9/222 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V + NI + AGAD V GS+ F G+ Y +++++ +
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRTVIDEMRAA 221
>gi|253681464|ref|ZP_04862261.1| ribulose-phosphate 3-epimerase [Clostridium botulinum D str. 1873]
gi|253561176|gb|EES90628.1| ribulose-phosphate 3-epimerase [Clostridium botulinum D str. 1873]
Length = 216
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 145/216 (67%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFSRLGE+I ++ K GA IH DVMDG FVPNISFG +I+S+R+ +
Sbjct: 2 VKLAPSILSADFSRLGEDIKSLDKYGADMIHIDVMDGMFVPNISFGIPIIKSIRNITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I +G DIIT H E+ H+ R++ I + G K GVAINP T +
Sbjct: 62 FDVHLMIKEPSRYIEDFVKSGADIITVHYEADKHLDRTVNYIKSFGVKAGVAINPATSIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I DMILIM+VNPGFGGQ+ I KIR+ KAL K +++ ++VDGGV N
Sbjct: 122 SIKHIIPIADMILIMSVNPGFGGQKYINYCSEKIREVKALSEKFNKNLLIQVDGGVGINN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V+ GA+++V GS+ F + GEI K + +LK+
Sbjct: 182 IKHVVECGANVIVAGSAVF-KNGEIK--KNIEELKE 214
>gi|320181873|gb|EFW56779.1| Ribulose-phosphate 3-epimerase [Shigella boydii ATCC 9905]
Length = 224
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVLDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|258625712|ref|ZP_05720591.1| Ribulose-phosphate 3-epimerase [Vibrio mimicus VM603]
gi|262166645|ref|ZP_06034382.1| ribulose-phosphate 3-epimerase [Vibrio mimicus VM223]
gi|258581950|gb|EEW06820.1| Ribulose-phosphate 3-epimerase [Vibrio mimicus VM603]
gi|262026361|gb|EEY45029.1| ribulose-phosphate 3-epimerase [Vibrio mimicus VM223]
Length = 224
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV NI
Sbjct: 126 LDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + +AGAD+ V GS+ F Q
Sbjct: 186 REIAEAGADMFVAGSAIFGQ 205
>gi|77463344|ref|YP_352848.1| ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides 2.4.1]
gi|77387762|gb|ABA78947.1| ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides 2.4.1]
Length = 236
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 129/198 (65%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R + V
Sbjct: 7 IKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIKGV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G+K G+A+NP T +
Sbjct: 67 MDVHLMIAPVDPYIEAFAAAGADVITAHLEAGPHIHRTLQAIRGTGRKAGLALNPGTGLD 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D +D++ IMTVNPGFGGQ+ I S + K+R +A+IG R I +E+DGGVT
Sbjct: 127 AVGHLLDLLDLVCIMTVNPGFGGQKFIASQVDKVRDLRAMIGDRPIHIEIDGGVTPETAP 186
Query: 185 SLVQAGADLLVVGSSFFN 202
+ AGAD+LV GS+ F
Sbjct: 187 LVAAAGADVLVAGSAVFK 204
>gi|312867496|ref|ZP_07727704.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis F0405]
gi|311096902|gb|EFQ55138.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis F0405]
Length = 219
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 135/201 (67%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+AD++ E+ + AGA H DVMDG FVPNISFGA V+ S+R +S
Sbjct: 3 TMKIAPSILSADYANFESELKRLEAAGADYAHIDVMDGHFVPNISFGAGVVESMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+++ + HI A AG DII+ H E++PHI +L+ I G K V INP TPV
Sbjct: 63 VFDCHLMVTNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRQAGVKASVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ V++ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ S+
Sbjct: 123 DSIKHVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELAALREEKGLDFDIEVDGGIDSQ 182
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
+I +AGA++ V GS FN
Sbjct: 183 SISQAKEAGANVFVAGSYVFN 203
>gi|260887291|ref|ZP_05898554.1| ribulose-phosphate 3-epimerase [Selenomonas sputigena ATCC 35185]
gi|330838955|ref|YP_004413535.1| ribulose-phosphate 3-epimerase [Selenomonas sputigena ATCC 35185]
gi|260862927|gb|EEX77427.1| ribulose-phosphate 3-epimerase [Selenomonas sputigena ATCC 35185]
gi|329746719|gb|AEC00076.1| ribulose-phosphate 3-epimerase [Selenomonas sputigena ATCC 35185]
Length = 214
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQ+ PSIL+ADF+ L +E+ I AGA+ +H DVMDG FVPNI+ GA V++SLR S +V
Sbjct: 2 IQVAPSILSADFAHLADEVQRIETAGAEYVHIDVMDGAFVPNITLGAPVVKSLRKCSAAV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ ++ I A+AG D+ITFH E+ H R ++ I ++G + GVA+NP TP+
Sbjct: 62 FDVHLMVERPEAQIASFAEAGADVITFHIEAVRHAHRLVQEIKSLGCRAGVALNPATPLV 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+LE+++ +IDM LIMTVNPGFGGQ+ I S + KI + + +L EVDGG+ +
Sbjct: 122 MLEELMADIDMALIMTVNPGFGGQKFIPSMLEKIALLRHTAEENDFALDIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
+ +AGA++LV GS+ +
Sbjct: 182 APLVREAGANILVAGSAVY 200
>gi|94312107|ref|YP_585317.1| ribulose-phosphate 3-epimerase [Cupriavidus metallidurans CH34]
gi|93355959|gb|ABF10048.1| D-ribulose-5-phosphate 3-epimerase [Cupriavidus metallidurans CH34]
Length = 266
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+P+ +I PSIL+ADF+RLGEE+ +T+AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 36 SPTFRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHV 95
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG +IITFHPE+S HI RSL I G + G+ NP T
Sbjct: 96 TAPIDVHLMVRPVDRIIPDFARAGANIITFHPEASDHIDRSLALIRDNGCQAGLVFNPAT 155
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ V+D +D+IL+M+VNPGFGGQ I T+ K+R + I R I LEVD
Sbjct: 156 PLHYLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDAYTARTGRRILLEVD 215
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GGV NI + AGAD V GS+ F +
Sbjct: 216 GGVKVDNIAEIAAAGADTFVAGSAVFGK 243
>gi|319953758|ref|YP_004165025.1| ribulose-phosphate 3-epimerase [Cellulophaga algicola DSM 14237]
gi|319422418|gb|ADV49527.1| ribulose-phosphate 3-epimerase [Cellulophaga algicola DSM 14237]
Length = 215
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF L ++ I + A H D+MDG FVPNIS+G V++++ Y+ D
Sbjct: 2 IAPSLLAADFGNLQRDVEMINNSNADWHHIDIMDGVFVPNISYGIPVVKAIAKYATKPLD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I A+ G ++ H E+ H+ R+L+ I A G K GVA+NP T + +L
Sbjct: 62 VHLMIVDPDRYIKTFAELGATNLSVHYEACTHLHRTLQAIKAEGMKAGVALNPHTNIMLL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED I +ID++ +M+VNPGFGGQ IE+T KIR KALI ++ +E+DGGVT +N K
Sbjct: 122 EDTIKDIDVVCMMSVNPGFGGQSFIENTYDKIRALKALIERKGAKTLIEIDGGVTDKNAK 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+L AGAD+LV GS FN K + + L D+
Sbjct: 182 ALKDAGADVLVAGSFIFNSKDPVKTIQELKDI 213
>gi|56477798|ref|YP_159387.1| ribulose-phosphate 3-epimerase [Aromatoleum aromaticum EbN1]
gi|56313841|emb|CAI08486.1| Ribulose-phosphate 3-epimerase [Aromatoleum aromaticum EbN1]
Length = 231
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 133/202 (65%), Gaps = 6/202 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R ++ +
Sbjct: 3 RIAPSLLSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHTSAPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG +IITFHPE+S H+ R+L+ I G + G+ NP TP+
Sbjct: 63 DVHLMVKPVDRIVPDFAKAGANIITFHPEASEHVDRTLQLIRDCGCQAGLVFNPATPLHH 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGVT 179
L+ V+D ID++L+M+VNPGFGGQ+ I T+PK+R A+ + R I L++DGGV
Sbjct: 123 LDHVLDSIDIVLLMSVNPGFGGQKFIPGTLPKLRAAREKLDAYEAASGRRILLQIDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
NI + AGAD V GS+ F
Sbjct: 183 VDNIAQIAAAGADTFVAGSAVF 204
>gi|253575783|ref|ZP_04853118.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844826|gb|EES72839.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 224
Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 137/206 (66%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I I PSIL+A+F++LGEE++++ + GA +H DVMDG FVPN++FG V++++
Sbjct: 1 MSNNIYIAPSILSANFAKLGEEVADVERGGADWLHVDVMDGHFVPNLTFGPLVLQAIAPQ 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + +I A AG +IT H E+ H+ R L I G K GVAINP
Sbjct: 61 TKLPLDVHLMIEKPEEYIPAFAKAGAHLITVHAEACVHLHRVLHLIKEQGVKAGVAINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGG 177
TP + + +V++++D++L+MTVNPGFGGQ I T+ KIRQ KA +G + +EVDGG
Sbjct: 121 TPASAVREVLEDVDLVLVMTVNPGFGGQAFIPGTLRKIRQLKAWKDELGLNDLRIEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + +V+AGAD+LV G++ F Q
Sbjct: 181 IAAATAPLVVEAGADVLVAGNAVFGQ 206
>gi|325290440|ref|YP_004266621.1| ribulose-5-phosphate 3-epimerase [Syntrophobotulus glycolicus DSM
8271]
gi|324965841|gb|ADY56620.1| ribulose-5-phosphate 3-epimerase [Syntrophobotulus glycolicus DSM
8271]
Length = 218
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 140/211 (66%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LGEE+ + GA+ +H DVMDG FVPN++ G VI++LR S
Sbjct: 3 IKIAPSILSADFTKLGEEVKRVEAGGAEILHIDVMDGHFVPNMTIGPPVIKALRKVSSMK 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + ++ +AG DIIT H E+S H+ R ++ I +MG K G+A+NP TP+
Sbjct: 63 FDVHLMIERPELYLEEFVNAGADIITVHAEASIHLHRLIQQIKSMGVKAGLALNPATPIE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L V+ ++DM+L+M+VNPGFGGQQ I+ +PKI +I + + +EVDGG+ +
Sbjct: 123 VLTYVLQDLDMVLLMSVNPGFGGQQFIQGVLPKIVALSTIIAQVNPGCLIEVDGGINTDT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + +AGAD++V G++ F + + K L
Sbjct: 183 ISLVSRAGADIIVAGAAVFTKPDPVLAIKEL 213
>gi|304397805|ref|ZP_07379681.1| ribulose-phosphate 3-epimerase [Pantoea sp. aB]
gi|304354516|gb|EFM18887.1| ribulose-phosphate 3-epimerase [Pantoea sp. aB]
Length = 227
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDALIPEFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + +I LEVDGGV NI
Sbjct: 126 LDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLREARRRIDQSGYNIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + AGAD+ V GS+ F G Y K ++D++
Sbjct: 186 REIAAAGADMFVAGSAIF---GHPDYKKVIDDMRNE 218
>gi|186477444|ref|YP_001858914.1| ribulose-phosphate 3-epimerase [Burkholderia phymatum STM815]
gi|184193903|gb|ACC71868.1| Ribulose-phosphate 3-epimerase [Burkholderia phymatum STM815]
Length = 227
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 138/225 (61%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANVISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDKLDLVLIMSVNPGFGGQSFIPEALNKLREARAKINAYKEKTGREIHLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD V GS+ F G Y K + D + ALA
Sbjct: 183 VKVDNIAEIAAAGADTFVAGSAIF---GHPDY-KAVIDKMRGALA 223
>gi|330836575|ref|YP_004411216.1| ribulose-5-phosphate 3-epimerase [Spirochaeta coccoides DSM 17374]
gi|329748478|gb|AEC01834.1| ribulose-5-phosphate 3-epimerase [Spirochaeta coccoides DSM 17374]
Length = 224
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 2/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL ADFS L E++ +I +GA+ +H DVMDG FVPNISFG D+IR+LR +S FD
Sbjct: 9 IAPSILGADFSHLEEDLVSIADSGAQWVHLDVMDGHFVPNISFGWDLIRTLRPFSPLTFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S + I A AG + IT H E++ H+ R L+ I ++G K+GV++ P TPV+ +
Sbjct: 69 THLMVSQPERFIEQFASAGSNAITVHHEATVHLYRVLQQIRSLGCKSGVSVVPSTPVSAI 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E V++ D++L+M+VNPGFGGQQ+I S + KI + L + VDGG+ ++
Sbjct: 129 EHVLEISDIVLVMSVNPGFGGQQMIPSMLQKIARLAELRETEGYDFLISVDGGINAKTAG 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V +GAD+LV GSSFF+ +ISY L L ++
Sbjct: 189 DAVDSGADVLVTGSSFFSAPDKISYVADLLSLGRA 223
>gi|327395547|dbj|BAK12969.1| ribulose-phosphate 3-epimerase Rpe [Pantoea ananatis AJ13355]
Length = 227
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDALIPEFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + SI LEVDGGV NI
Sbjct: 126 LDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLREARKRIDQSGYSIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G Y K ++D++
Sbjct: 186 GQIAAAGADMFVAGSAIF---GHPDYKKVIDDMR 216
>gi|291619217|ref|YP_003521959.1| Rpe [Pantoea ananatis LMG 20103]
gi|291154247|gb|ADD78831.1| Rpe [Pantoea ananatis LMG 20103]
Length = 231
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 10 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 70 DVHLMVKPVDALIPEFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + SI LEVDGGV NI
Sbjct: 130 LDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLREARKRIDQSGYSIRLEVDGGVKIDNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+ V GS+ F G Y K ++D++
Sbjct: 190 GQIAAAGADMFVAGSAIF---GHPDYKKVIDDMRNE 222
>gi|255656554|ref|ZP_05401963.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-23m63]
gi|296449994|ref|ZP_06891758.1| ribulose-phosphate 3-epimerase [Clostridium difficile NAP08]
gi|296878375|ref|ZP_06902383.1| ribulose-phosphate 3-epimerase [Clostridium difficile NAP07]
gi|296261264|gb|EFH08095.1| ribulose-phosphate 3-epimerase [Clostridium difficile NAP08]
gi|296430673|gb|EFH16512.1| ribulose-phosphate 3-epimerase [Clostridium difficile NAP07]
Length = 223
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 149/219 (68%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I++ PSIL+ADF++L E++ + AG + +H DVMDG FVPNI+ G V++SL+ + +
Sbjct: 2 IKLAPSILSADFAKLLEDVRKVESAGCEYLHIDVMDGHFVPNITLGPLVVKSLKKENINM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + D +I AGCDIIT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 62 VFDAHLMIENPDQYIEEFVKAGCDIITVHQEACVHLHRTIQNIKSHGIKAGVVLNPATPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++ V+ ++DM+L+M+VNPGFGGQ I + KI++ KA+I + +I +EVDGG++ +
Sbjct: 122 DTIKHVLPDLDMVLLMSVNPGFGGQSFIPCVLDKIKELKAIIDSQGLNIDIEVDGGISPK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ +VQAGA+++V GS+ F G + +N +K+A
Sbjct: 182 NVDKVVQAGANVIVAGSAIF---GSDDIQETVNLFRKNA 217
>gi|313905215|ref|ZP_07838583.1| ribulose-phosphate 3-epimerase [Eubacterium cellulosolvens 6]
gi|313469968|gb|EFR65302.1| ribulose-phosphate 3-epimerase [Eubacterium cellulosolvens 6]
Length = 225
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 145/226 (64%), Gaps = 14/226 (6%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P ++ PSIL+ADF++LGE++ + +AG +H DVMDG FVP +SFG V++SLR
Sbjct: 1 MKPVYRLSPSILSADFAKLGEQVKELGEAGVPWVHIDVMDGQFVPPVSFGDPVVKSLRKV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D FD HLM+ I +AG D++T H E+ H+ R+L+ IH G K GVA+NP
Sbjct: 61 TDLFFDVHLMVVEPARFIEDYKNAGADLMTVHAEACGHLDRTLQAIHDAGMKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGG 177
TP+ +L+ V+D++DM+LIM+VNPG+GGQ+ I + KIR + + G ++ ++VDGG
Sbjct: 121 TPLNVLDYVMDKLDMVLIMSVNPGYGGQKFIPGMVQKIRDLRKKLDEAGYENVPIQVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + I S++ AGA ++V GS+ F D++K+A A+
Sbjct: 181 INTDTIDSVLDAGASVIVAGSAVFG-----------GDIQKNAAAL 215
>gi|300721140|ref|YP_003710408.1| D-ribulose-5-phosphate 3-epimerase [Xenorhabdus nematophila ATCC
19061]
gi|297627625|emb|CBJ88146.1| D-ribulose-5-phosphate 3-epimerase [Xenorhabdus nematophila ATCC
19061]
Length = 224
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 132/206 (64%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKQDFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRHY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 61 GITAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHIDRTLQLIREHGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I I LEVDGG
Sbjct: 121 ATPLRYLDYVLDKLDVILLMSVNPGFGGQSFIPETLKKLRQVRKIIDDSGYDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ NI QAGAD+ V GS+ F+Q
Sbjct: 181 IKPSNIAEAAQAGADMFVAGSAIFSQ 206
>gi|167587609|ref|ZP_02379997.1| ribulose-phosphate 3-epimerase [Burkholderia ubonensis Bu]
Length = 228
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 137/220 (62%), Gaps = 9/220 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+ +A I R I LEVDGG
Sbjct: 123 NYLDYVMDRLDFVLLMSVNPGFGGQSFIPETLNKLRETRARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V + NI + AGAD V GS+ F G+ Y K +++++
Sbjct: 183 VKADNIAEIAAAGADTFVAGSAIF---GKPDYRKVIDEMR 219
>gi|16330729|ref|NP_441457.1| ribulose-phosphate 3-epimerase [Synechocystis sp. PCC 6803]
gi|2829613|sp|P74061|RPE_SYNY3 RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|52695843|pdb|1TQJ|A Chain A, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695844|pdb|1TQJ|B Chain B, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695845|pdb|1TQJ|C Chain C, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695846|pdb|1TQJ|D Chain D, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695847|pdb|1TQJ|E Chain E, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695848|pdb|1TQJ|F Chain F, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|1653221|dbj|BAA18137.1| pentose-5-phosphate-3-epimerase [Synechocystis sp. PCC 6803]
Length = 230
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 142/223 (63%), Gaps = 7/223 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I + PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R
Sbjct: 1 MSKNIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAIN 118
+ D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GKK G +N
Sbjct: 61 TKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP+ LE V+ D+ILIM+VNPGFGGQ I +PKIR + + +R + +EVDG
Sbjct: 121 PSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ N +++AGA+ +V GS+ FN +YA+ + ++ S
Sbjct: 181 GLKPNNTWQVLEAGANAIVAGSAVFNAP---NYAEAIAGVRNS 220
>gi|312795923|ref|YP_004028845.1| Ribulose-phosphate 3-epimerase [Burkholderia rhizoxinica HKI 454]
gi|312167698|emb|CBW74701.1| Ribulose-phosphate 3-epimerase (EC 5.1.3.1) [Burkholderia
rhizoxinica HKI 454]
Length = 235
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R + +
Sbjct: 14 TFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCEAIRPHVNV 73
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP T +
Sbjct: 74 PIDVHLMVRPVDRLVPDFARAGANVISFHPEASDHIDRTLSLIRDHGCKAGLVFNPATSL 133
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V++ ID++LIM+VNPGFGGQ I + K+R+A+ I R I LEVDGG
Sbjct: 134 NYLDHVMERIDLVLIMSVNPGFGGQSFIPEALNKLREARRRINAYAAQTGREIHLEVDGG 193
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V + NI + AGAD V GS+ F G+ Y + +N ++ +
Sbjct: 194 VKADNIAQIAAAGADTFVAGSAIF---GQPDYRQVINQMRAA 232
>gi|1169389|sp|P45455|RPE_SERMA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|498769|emb|CAA55178.1| dod [Serratia marcescens]
Length = 210
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 132/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ +N+ AG +HFDVMD +VPN++ G V +LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+++ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGASYISFHPEASEHVDRTIQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+ID+IL+M+VNPGFGGQ I T+ K+RQ + LI R I LEVDGGV NI
Sbjct: 126 LDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDSGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ F Q
Sbjct: 186 AEIAAAGADMFVAGSAIFGQ 205
>gi|124268650|ref|YP_001022654.1| ribulose-5-phosphate 3-epimerase [Methylibium petroleiphilum PM1]
gi|124261425|gb|ABM96419.1| ribulose-5-phosphate 3-epimerase [Methylibium petroleiphilum PM1]
Length = 229
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 139/213 (65%), Gaps = 10/213 (4%)
Query: 1 MTPS--IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+P +I PS+L+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +LR
Sbjct: 1 MSPQRHFRIAPSLLSADFARLGEEVKDVIAAGADWIHFDVMDNHYVPNLTFGPMVCEALR 60
Query: 59 SYSDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
++ + D HLM+ +D+ A AG D+++FHP++S H+ R+L+ I G +
Sbjct: 61 KHAVTAAGVRVPIDVHLMVQPVDALAQAFAKAGADLVSFHPDASTHVDRTLQLIKDAGCQ 120
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSI 170
G+ NP + +LE VID++D++L+M+VNPGFGGQ I ST+ K+ + + LI R I
Sbjct: 121 AGLVFNPAASLDVLEWVIDKVDLVLLMSVNPGFGGQSFIPSTLKKLARVRQLIDASGRDI 180
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
LEVDGG+ + NI++ AGAD V GS+ F Q
Sbjct: 181 RLEVDGGIKTDNIRAAADAGADTFVAGSAIFGQ 213
>gi|327405462|ref|YP_004346300.1| ribulose-phosphate 3-epimerase [Fluviicola taffensis DSM 16823]
gi|327320970|gb|AEA45462.1| ribulose-phosphate 3-epimerase [Fluviicola taffensis DSM 16823]
Length = 216
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 134/216 (62%), Gaps = 4/216 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ DF L + I ++ A H DVMDG FVPNISFG +I +L+ +
Sbjct: 2 SVIIAPSILSCDFGNLERDFELINQSEADWFHVDVMDGVFVPNISFGFPIISALKKVAKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCH+MI + D I A AG DI+T H E+ H+ R++ IH G K GVA+NP TPV
Sbjct: 62 TIDCHIMIVNPDQFIAEFAKAGVDILTVHYEACTHLHRTIGAIHEAGMKAGVALNPHTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTS 180
++LE+VI ++D++LIM+VNPGFGGQ+ I I K++Q KALI G ++I +EVDGGV
Sbjct: 122 SVLENVIADLDLVLIMSVNPGFGGQKFIHQAIEKVKQTKALIEKTGSKAI-IEVDGGVNL 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K LV AGA LV GS FN + L L
Sbjct: 181 ETGKLLVDAGAQALVAGSFVFNSPNPTATISSLKQL 216
>gi|194434640|ref|ZP_03066895.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 1012]
gi|194417099|gb|EDX33213.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 1012]
gi|332085531|gb|EGI90697.1| ribulose-phosphate 3-epimerase [Shigella boydii 5216-82]
gi|332085843|gb|EGI91007.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 155-74]
Length = 225
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVLDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|478182|pir||F47019 ribulose-phosphate 3-epimerase (EC 5.1.3.1) - Alcaligenes eutrophus
plasmid pHG1
Length = 241
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 144/224 (64%), Gaps = 7/224 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+ADF+RLGEE+ I GA +HFDVMD +VPN++ G V ++R
Sbjct: 15 AIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPLVSI 74
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG ++I+FHPE+S H+ R++ I G K G+ +NP TP+
Sbjct: 75 PIDVHLMVEPVDALIPMFAKAGANLISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATPL 134
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
+ L+ +D++D++L+M+VNPGFGGQ I + K+RQA+A I G R + LE+DGG
Sbjct: 135 SWLDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVAAGGRPVWLEIDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKSA 220
V + NI + +AGAD V GS+ F + Y L+ L+++A
Sbjct: 195 VKADNITEIARAGADTFVAGSAVFGAPDADGGYRGILHRLREAA 238
>gi|113476213|ref|YP_722274.1| ribulose-phosphate 3-epimerase [Trichodesmium erythraeum IMS101]
gi|110167261|gb|ABG51801.1| ribulose-5-phosphate 3-epimerase [Trichodesmium erythraeum IMS101]
Length = 236
Score = 194 bits (493), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 144/219 (65%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFSRLG+E+ + +AGA IH DVMDG FVPNI+ G ++++LR +
Sbjct: 9 IVISPSILSADFSRLGDEVRAVDQAGADWIHIDVMDGRFVPNITIGPLIVKALRPVTKKP 68
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP TP
Sbjct: 69 LDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNPSTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++E V+D D++LIM+VNPGFGGQ I + I KIR+ + + R ++ +EVDGG+ +
Sbjct: 129 LELIEYVLDLCDLVLIMSVNPGFGGQSFIPTVISKIRKLREMCDARGLNPWIEVDGGLKT 188
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ F YA+ +N ++ S
Sbjct: 189 DNTWQVLEAGANAIVAGSAVFKAN---DYAEAINGIRNS 224
>gi|308188402|ref|YP_003932533.1| D-ribulose-5-phosphate 3-epimerase [Pantoea vagans C9-1]
gi|308058912|gb|ADO11084.1| D-ribulose-5-phosphate 3-epimerase [Pantoea vagans C9-1]
Length = 227
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDALIPEFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGMVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + +I LEVDGGV NI
Sbjct: 126 LDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLREARRRIDQSGYNIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + AGAD+ V GS+ F G Y K ++D++
Sbjct: 186 REIAAAGADMFVAGSAIF---GHPDYKKVIDDMRNE 218
>gi|251787914|ref|YP_003002635.1| ribulose-phosphate 3-epimerase [Dickeya zeae Ech1591]
gi|247536535|gb|ACT05156.1| ribulose-phosphate 3-epimerase [Dickeya zeae Ech1591]
Length = 225
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 138/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V++SLR+Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTARVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE+S H+ R+L+ I + G K G+ NP
Sbjct: 60 GITAPVDVHLMVKPVDRLIPDFAEAGASFITFHPEASEHVDRTLQLIKSHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T ++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + I LEVDGG
Sbjct: 120 ATSLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRRIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ F Q
Sbjct: 180 VKVDNIAQIAAAGADMFVAGSAIFGQ 205
>gi|83648750|ref|YP_437185.1| ribulose-phosphate 3-epimerase [Hahella chejuensis KCTC 2396]
gi|83636793|gb|ABC32760.1| ribulose-phosphate 3-epimerase [Hahella chejuensis KCTC 2396]
Length = 225
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 138/212 (65%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ N+ +AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 6 IAPSILSADFARLGEEVVNVLEAGADIVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I +AG ITFHPE+S HI RSL+ I G K G+ NP +P+
Sbjct: 66 DVHLMVKPVDAMIASFIEAGATYITFHPEASEHIDRSLQLIRDGGCKAGLVFNPASPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
++ V+D++DM+L+M+VNPGFGGQ I +T+ K+R+A+A I I LE+DGGV NI
Sbjct: 126 MDYVMDKLDMVLLMSVNPGFGGQAFIPATLNKLREARAKIDASGLPIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + AGAD V GS+ FN + ++ D
Sbjct: 186 REIAAAGADTFVAGSAIFNTDDYAATIAKMRD 217
>gi|238792892|ref|ZP_04636522.1| Ribulose-phosphate 3-epimerase [Yersinia intermedia ATCC 29909]
gi|238727746|gb|EEQ19270.1| Ribulose-phosphate 3-epimerase [Yersinia intermedia ATCC 29909]
Length = 225
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 143/220 (65%), Gaps = 7/220 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +V
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYGITVPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDASGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + AGAD+ V GS+ F+Q YA + D +S LA+
Sbjct: 186 RQIAAAGADMFVAGSAIFSQP---DYAAVI-DAMRSELAM 221
>gi|53803277|ref|YP_114988.1| ribulose-phosphate 3-epimerase [Methylococcus capsulatus str. Bath]
gi|53757038|gb|AAU91329.1| ribulose-phosphate 3-epimerase [Methylococcus capsulatus str. Bath]
Length = 230
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PSIL+ADF+RLGEE+ ++ K+GA +HFDVMD +VPN++ G V +LR +
Sbjct: 3 EFWIAPSILSADFARLGEEVDDVLKSGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGVT 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ +D I A AG ITFHPE+S HI RSL+ + G KTG+ NP TP
Sbjct: 63 APIDVHLMVKPVDRIIPDFAKAGASYITFHPEASEHIDRSLQLVKDSGCKTGLVFNPATP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ L+ V+D++DMIL+M+VNPGFGGQ I + K+R+ + I R+I LE+DGGV +
Sbjct: 123 LNYLDHVMDKLDMILLMSVNPGFGGQSFIPYVLDKVRECRRRIDASGRNIRLEIDGGVNA 182
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
RNI+ + AG D V GS+ F
Sbjct: 183 RNIREIAAAGCDTFVAGSAVF 203
>gi|88801443|ref|ZP_01116971.1| putative ribulose-phosphate 3-epimerase [Polaribacter irgensii
23-P]
gi|88782101|gb|EAR13278.1| putative ribulose-phosphate 3-epimerase [Polaribacter irgensii
23-P]
Length = 218
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 139/214 (64%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L +I + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 5 IAPSILAADFANLQRDIEMVNNSEADWFHIDIMDGVFVPNISFGMPVLKAIAKHAKKTID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I AD G +I+T H E PH+ R+++ I G K GVA+NP TP+++L
Sbjct: 65 VHLMIVNPDQYIQTFADLGANILTVHYEVCPHLHRTIQAIKDAGMKAGVALNPHTPISVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
EDVI ++D++ IM+VNPGFGGQ IE+T K+ Q + LI +E+DGGVT+ N
Sbjct: 125 EDVIIDLDLVCIMSVNPGFGGQSFIENTYKKVSQLRQLIDFTASDCQIEIDGGVTNINAN 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+L++AGA++LV GS F G + + ++DLK
Sbjct: 185 ALIEAGANVLVAGSFVF---GAENPTETISDLKN 215
>gi|15803889|ref|NP_289925.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 EDL933]
gi|15833482|ref|NP_312255.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
Sakai]
gi|16131264|ref|NP_417845.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|24114649|ref|NP_709159.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2a str. 301]
gi|26249980|ref|NP_756020.1| ribulose-phosphate 3-epimerase [Escherichia coli CFT073]
gi|30065330|ref|NP_839501.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2a str. 2457T]
gi|74313891|ref|YP_312310.1| ribulose-phosphate 3-epimerase [Shigella sonnei Ss046]
gi|82545741|ref|YP_409688.1| ribulose-phosphate 3-epimerase [Shigella boydii Sb227]
gi|89110624|ref|AP_004404.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. W3110]
gi|91212858|ref|YP_542844.1| ribulose-phosphate 3-epimerase [Escherichia coli UTI89]
gi|110643620|ref|YP_671350.1| ribulose-phosphate 3-epimerase [Escherichia coli 536]
gi|110807218|ref|YP_690738.1| ribulose-phosphate 3-epimerase [Shigella flexneri 5 str. 8401]
gi|117625654|ref|YP_858977.1| ribulose-phosphate 3-epimerase [Escherichia coli APEC O1]
gi|157155929|ref|YP_001464840.1| ribulose-phosphate 3-epimerase [Escherichia coli E24377A]
gi|157162862|ref|YP_001460180.1| ribulose-phosphate 3-epimerase [Escherichia coli HS]
gi|168751803|ref|ZP_02776825.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4113]
gi|168753135|ref|ZP_02778142.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4401]
gi|168759407|ref|ZP_02784414.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4501]
gi|168765730|ref|ZP_02790737.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4486]
gi|168772726|ref|ZP_02797733.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4196]
gi|168779466|ref|ZP_02804473.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4076]
gi|168785187|ref|ZP_02810194.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC869]
gi|168797153|ref|ZP_02822160.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC508]
gi|170018378|ref|YP_001723332.1| ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|170082903|ref|YP_001732223.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|170680384|ref|YP_001745629.1| ribulose-phosphate 3-epimerase [Escherichia coli SMS-3-5]
gi|187730135|ref|YP_001882061.1| ribulose-phosphate 3-epimerase [Shigella boydii CDC 3083-94]
gi|188493881|ref|ZP_03001151.1| ribulose-phosphate 3-epimerase [Escherichia coli 53638]
gi|191167882|ref|ZP_03029686.1| ribulose-phosphate 3-epimerase [Escherichia coli B7A]
gi|191171526|ref|ZP_03033074.1| ribulose-phosphate 3-epimerase [Escherichia coli F11]
gi|193061664|ref|ZP_03042761.1| ribulose-phosphate 3-epimerase [Escherichia coli E22]
gi|193068854|ref|ZP_03049814.1| ribulose-phosphate 3-epimerase [Escherichia coli E110019]
gi|194427003|ref|ZP_03059555.1| ribulose-phosphate 3-epimerase [Escherichia coli B171]
gi|194439475|ref|ZP_03071550.1| ribulose-phosphate 3-epimerase [Escherichia coli 101-1]
gi|195934874|ref|ZP_03080256.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4024]
gi|208807259|ref|ZP_03249596.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4206]
gi|208813861|ref|ZP_03255190.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4045]
gi|208820658|ref|ZP_03260978.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4042]
gi|209397258|ref|YP_002272820.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4115]
gi|209920838|ref|YP_002294922.1| ribulose-phosphate 3-epimerase [Escherichia coli SE11]
gi|215488667|ref|YP_002331098.1| ribulose-phosphate 3-epimerase [Escherichia coli O127:H6 str.
E2348/69]
gi|217326586|ref|ZP_03442670.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
TW14588]
gi|218555931|ref|YP_002388844.1| ribulose-phosphate 3-epimerase [Escherichia coli IAI1]
gi|218560443|ref|YP_002393356.1| ribulose-phosphate 3-epimerase [Escherichia coli S88]
gi|218691662|ref|YP_002399874.1| ribulose-phosphate 3-epimerase [Escherichia coli ED1a]
gi|218697066|ref|YP_002404733.1| ribulose-phosphate 3-epimerase [Escherichia coli 55989]
gi|218702129|ref|YP_002409758.1| ribulose-phosphate 3-epimerase [Escherichia coli IAI39]
gi|218706976|ref|YP_002414495.1| ribulose-phosphate 3-epimerase [Escherichia coli UMN026]
gi|227883516|ref|ZP_04001321.1| ribulose-phosphate 3-epimerase [Escherichia coli 83972]
gi|237703113|ref|ZP_04533594.1| ribulose-phosphate 3-epimerase [Escherichia sp. 3_2_53FAA]
gi|238902477|ref|YP_002928273.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli BW2952]
gi|253771787|ref|YP_003034618.1| ribulose-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038550|ref|ZP_04872606.1| ribulose-phosphate 3-epimerase [Escherichia sp. 1_1_43]
gi|254163314|ref|YP_003046422.1| ribulose-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|254795300|ref|YP_003080137.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
TW14359]
gi|256020730|ref|ZP_05434595.1| ribulose-phosphate 3-epimerase [Shigella sp. D9]
gi|256025887|ref|ZP_05439752.1| ribulose-phosphate 3-epimerase [Escherichia sp. 4_1_40B]
gi|260846170|ref|YP_003223948.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O103:H2 str.
12009]
gi|260857493|ref|YP_003231384.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O26:H11 str.
11368]
gi|260870112|ref|YP_003236514.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O111:H- str.
11128]
gi|261224668|ref|ZP_05938949.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254437|ref|ZP_05946970.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
FRIK966]
gi|291284722|ref|YP_003501540.1| Ribulose-phosphate 3-epimerase [Escherichia coli O55:H7 str.
CB9615]
gi|293406964|ref|ZP_06650888.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1412]
gi|293412802|ref|ZP_06655470.1| ribulose-phosphate 3-epimerase [Escherichia coli B354]
gi|293416786|ref|ZP_06659423.1| ribulose-phosphate 3-epimerase [Escherichia coli B185]
gi|293453693|ref|ZP_06664112.1| ribulose-phosphate 3-epimerase [Escherichia coli B088]
gi|297519193|ref|ZP_06937579.1| ribulose-phosphate 3-epimerase [Escherichia coli OP50]
gi|298382706|ref|ZP_06992301.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1302]
gi|300815420|ref|ZP_07095645.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 107-1]
gi|300822822|ref|ZP_07102958.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 119-7]
gi|300896542|ref|ZP_07115064.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 198-1]
gi|300907476|ref|ZP_07125120.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 84-1]
gi|300919337|ref|ZP_07135848.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 115-1]
gi|300926932|ref|ZP_07142695.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 182-1]
gi|300931087|ref|ZP_07146440.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 187-1]
gi|300937323|ref|ZP_07152163.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
gi|300946875|ref|ZP_07161115.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300956709|ref|ZP_07168981.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 175-1]
gi|300974832|ref|ZP_07172740.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 45-1]
gi|300987076|ref|ZP_07177985.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 200-1]
gi|301019631|ref|ZP_07183789.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 69-1]
gi|301023159|ref|ZP_07186961.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|301050412|ref|ZP_07197298.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 185-1]
gi|301302261|ref|ZP_07208393.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 124-1]
gi|301329682|ref|ZP_07222435.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 78-1]
gi|301645821|ref|ZP_07245737.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 146-1]
gi|306816276|ref|ZP_07450414.1| ribulose-phosphate 3-epimerase [Escherichia coli NC101]
gi|307311952|ref|ZP_07591590.1| ribulose-phosphate 3-epimerase [Escherichia coli W]
gi|309794650|ref|ZP_07689072.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 145-7]
gi|312968308|ref|ZP_07782518.1| ribulose-phosphate 3-epimerase [Escherichia coli 2362-75]
gi|312972351|ref|ZP_07786525.1| ribulose-phosphate 3-epimerase [Escherichia coli 1827-70]
gi|331649182|ref|ZP_08350268.1| ribulose-phosphate 3-epimerase [Escherichia coli M605]
gi|331654962|ref|ZP_08355961.1| ribulose-phosphate 3-epimerase [Escherichia coli M718]
gi|331659674|ref|ZP_08360612.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
gi|331664988|ref|ZP_08365889.1| ribulose-phosphate 3-epimerase [Escherichia coli TA143]
gi|331670204|ref|ZP_08371043.1| ribulose-phosphate 3-epimerase [Escherichia coli TA271]
gi|331674878|ref|ZP_08375635.1| ribulose-phosphate 3-epimerase [Escherichia coli TA280]
gi|331679446|ref|ZP_08380116.1| ribulose-phosphate 3-epimerase [Escherichia coli H591]
gi|331685024|ref|ZP_08385610.1| ribulose-phosphate 3-epimerase [Escherichia coli H299]
gi|332281930|ref|ZP_08394343.1| ribulose-phosphate 3-epimerase [Shigella sp. D9]
gi|84028110|sp|P0AG09|RPE_ECO57 RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|84028150|sp|P0AG08|RPE_ECOL6 RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|84028157|sp|P0AG07|RPE_ECOLI RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|84028158|sp|P0AG10|RPE_SHIFL RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|12518006|gb|AAG58486.1|AE005560_12 D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EDL933]
gi|26110409|gb|AAN82594.1|AE016768_12 Ribulose-phosphate 3-epimerase [Escherichia coli CFT073]
gi|606320|gb|AAA58183.1| 24 kD protein [Escherichia coli str. K-12 substr. MG1655]
gi|1789788|gb|AAC76411.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|13363702|dbj|BAB37651.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
Sakai]
gi|24053853|gb|AAN44866.1| D-ribulose-5-phosphate 3-epimerase [Shigella flexneri 2a str. 301]
gi|30043592|gb|AAP19312.1| D-ribulose-5-phosphate 3-epimerase [Shigella flexneri 2a str.
2457T]
gi|73857368|gb|AAZ90075.1| D-ribulose-5-phosphate 3-epimerase [Shigella sonnei Ss046]
gi|81247152|gb|ABB67860.1| D-ribulose-5-phosphate 3-epimerase [Shigella boydii Sb227]
gi|85676655|dbj|BAE77905.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K12
substr. W3110]
gi|91074432|gb|ABE09313.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli UTI89]
gi|110345212|gb|ABG71449.1| ribulose-phosphate 3-epimerase [Escherichia coli 536]
gi|110616766|gb|ABF05433.1| D-ribulose-5-phosphate 3-epimerase [Shigella flexneri 5 str. 8401]
gi|115514778|gb|ABJ02853.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli APEC O1]
gi|157068542|gb|ABV07797.1| ribulose-phosphate 3-epimerase [Escherichia coli HS]
gi|157077959|gb|ABV17667.1| ribulose-phosphate 3-epimerase [Escherichia coli E24377A]
gi|169753306|gb|ACA76005.1| Ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|169890738|gb|ACB04445.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|170518102|gb|ACB16280.1| ribulose-phosphate 3-epimerase [Escherichia coli SMS-3-5]
gi|187427127|gb|ACD06401.1| ribulose-phosphate 3-epimerase [Shigella boydii CDC 3083-94]
gi|187771378|gb|EDU35222.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4196]
gi|188014200|gb|EDU52322.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4113]
gi|188489080|gb|EDU64183.1| ribulose-phosphate 3-epimerase [Escherichia coli 53638]
gi|189002650|gb|EDU71636.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4076]
gi|189359178|gb|EDU77597.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4401]
gi|189364543|gb|EDU82962.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4486]
gi|189369699|gb|EDU88115.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4501]
gi|189374480|gb|EDU92896.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC869]
gi|189380033|gb|EDU98449.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC508]
gi|190902055|gb|EDV61800.1| ribulose-phosphate 3-epimerase [Escherichia coli B7A]
gi|190908153|gb|EDV67744.1| ribulose-phosphate 3-epimerase [Escherichia coli F11]
gi|192932454|gb|EDV85051.1| ribulose-phosphate 3-epimerase [Escherichia coli E22]
gi|192957930|gb|EDV88373.1| ribulose-phosphate 3-epimerase [Escherichia coli E110019]
gi|194414964|gb|EDX31234.1| ribulose-phosphate 3-epimerase [Escherichia coli B171]
gi|194421561|gb|EDX37573.1| ribulose-phosphate 3-epimerase [Escherichia coli 101-1]
gi|208727060|gb|EDZ76661.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4206]
gi|208735138|gb|EDZ83825.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4045]
gi|208740781|gb|EDZ88463.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4042]
gi|209158658|gb|ACI36091.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4115]
gi|209756678|gb|ACI76651.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209756680|gb|ACI76652.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209756682|gb|ACI76653.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209756684|gb|ACI76654.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209756686|gb|ACI76655.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209914097|dbj|BAG79171.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli SE11]
gi|215266739|emb|CAS11178.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O127:H6 str.
E2348/69]
gi|217322807|gb|EEC31231.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
TW14588]
gi|218353798|emb|CAV00133.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli 55989]
gi|218362699|emb|CAR00325.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli IAI1]
gi|218367212|emb|CAR04986.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli S88]
gi|218372115|emb|CAR19977.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli IAI39]
gi|218429226|emb|CAR10036.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli ED1a]
gi|218434073|emb|CAR14990.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli UMN026]
gi|222035088|emb|CAP77833.1| ribulose-phosphate 3-epimerase [Escherichia coli LF82]
gi|226839056|gb|EEH71079.1| ribulose-phosphate 3-epimerase [Escherichia sp. 1_1_43]
gi|226902377|gb|EEH88636.1| ribulose-phosphate 3-epimerase [Escherichia sp. 3_2_53FAA]
gi|227839395|gb|EEJ49861.1| ribulose-phosphate 3-epimerase [Escherichia coli 83972]
gi|238861006|gb|ACR63004.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli BW2952]
gi|242378912|emb|CAQ33707.1| ribulose phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|253322831|gb|ACT27433.1| ribulose-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975215|gb|ACT40886.1| ribulose-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|253979371|gb|ACT45041.1| ribulose-phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|254594700|gb|ACT74061.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
TW14359]
gi|257756142|dbj|BAI27644.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O26:H11 str.
11368]
gi|257761317|dbj|BAI32814.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O103:H2 str.
12009]
gi|257766468|dbj|BAI37963.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O111:H- str.
11128]
gi|260447595|gb|ACX38017.1| Ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|281180417|dbj|BAI56747.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli SE15]
gi|281602734|gb|ADA75718.1| D-ribulose-5-phosphate 3-epimerase [Shigella flexneri 2002017]
gi|284923378|emb|CBG36472.1| ribulose-phosphate 3-epimerase [Escherichia coli 042]
gi|290764595|gb|ADD58556.1| Ribulose-phosphate 3-epimerase [Escherichia coli O55:H7 str.
CB9615]
gi|291321819|gb|EFE61250.1| ribulose-phosphate 3-epimerase [Escherichia coli B088]
gi|291425775|gb|EFE98809.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1412]
gi|291431362|gb|EFF04347.1| ribulose-phosphate 3-epimerase [Escherichia coli B185]
gi|291468449|gb|EFF10942.1| ribulose-phosphate 3-epimerase [Escherichia coli B354]
gi|294491368|gb|ADE90124.1| ribulose-phosphate 3-epimerase [Escherichia coli IHE3034]
gi|298276542|gb|EFI18060.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1302]
gi|299880945|gb|EFI89156.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|300297880|gb|EFJ54265.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 185-1]
gi|300306291|gb|EFJ60811.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 200-1]
gi|300316493|gb|EFJ66277.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 175-1]
gi|300359615|gb|EFJ75485.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 198-1]
gi|300399153|gb|EFJ82691.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 69-1]
gi|300400786|gb|EFJ84324.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 84-1]
gi|300410464|gb|EFJ94002.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 45-1]
gi|300413593|gb|EFJ96903.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 115-1]
gi|300417071|gb|EFK00382.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 182-1]
gi|300453484|gb|EFK17104.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300457606|gb|EFK21099.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
gi|300461070|gb|EFK24563.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 187-1]
gi|300524588|gb|EFK45657.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 119-7]
gi|300532312|gb|EFK53374.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 107-1]
gi|300842424|gb|EFK70184.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 124-1]
gi|300844261|gb|EFK72021.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 78-1]
gi|301075935|gb|EFK90741.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 146-1]
gi|305850672|gb|EFM51129.1| ribulose-phosphate 3-epimerase [Escherichia coli NC101]
gi|306908096|gb|EFN38596.1| ribulose-phosphate 3-epimerase [Escherichia coli W]
gi|307555469|gb|ADN48244.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli ABU 83972]
gi|307628447|gb|ADN72751.1| ribulose-phosphate 3-epimerase [Escherichia coli UM146]
gi|308121700|gb|EFO58962.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 145-7]
gi|309703797|emb|CBJ03138.1| ribulose-phosphate 3-epimerase [Escherichia coli ETEC H10407]
gi|310334728|gb|EFQ00933.1| ribulose-phosphate 3-epimerase [Escherichia coli 1827-70]
gi|312287133|gb|EFR15043.1| ribulose-phosphate 3-epimerase [Escherichia coli 2362-75]
gi|312947934|gb|ADR28761.1| ribulose-phosphate 3-epimerase [Escherichia coli O83:H1 str. NRG
857C]
gi|313647318|gb|EFS11770.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2a str. 2457T]
gi|315062663|gb|ADT76990.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli W]
gi|315137962|dbj|BAJ45121.1| ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|315255973|gb|EFU35941.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 85-1]
gi|315286002|gb|EFU45440.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 110-3]
gi|315291633|gb|EFU50989.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 153-1]
gi|315295886|gb|EFU55199.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 16-3]
gi|315619005|gb|EFU99588.1| ribulose-phosphate 3-epimerase [Escherichia coli 3431]
gi|320175751|gb|EFW50837.1| Ribulose-phosphate 3-epimerase [Shigella dysenteriae CDC 74-1112]
gi|320186746|gb|EFW61469.1| Ribulose-phosphate 3-epimerase [Shigella flexneri CDC 796-83]
gi|320191604|gb|EFW66254.1| Ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC1212]
gi|320199554|gb|EFW74144.1| Ribulose-phosphate 3-epimerase [Escherichia coli EC4100B]
gi|320639668|gb|EFX09262.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
G5101]
gi|320645167|gb|EFX14183.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H- str.
493-89]
gi|320650478|gb|EFX18944.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H- str. H
2687]
gi|320655669|gb|EFX23592.1| ribulose-phosphate 3-epimerase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661454|gb|EFX28869.1| ribulose-phosphate 3-epimerase [Escherichia coli O55:H7 str. USDA
5905]
gi|320666476|gb|EFX33459.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
LSU-61]
gi|323154215|gb|EFZ40418.1| ribulose-phosphate 3-epimerase [Escherichia coli EPECa14]
gi|323162770|gb|EFZ48607.1| ribulose-phosphate 3-epimerase [Escherichia coli E128010]
gi|323164944|gb|EFZ50735.1| ribulose-phosphate 3-epimerase [Shigella sonnei 53G]
gi|323174015|gb|EFZ59643.1| ribulose-phosphate 3-epimerase [Escherichia coli LT-68]
gi|323179090|gb|EFZ64664.1| ribulose-phosphate 3-epimerase [Escherichia coli 1180]
gi|323182845|gb|EFZ68246.1| ribulose-phosphate 3-epimerase [Escherichia coli 1357]
gi|323189029|gb|EFZ74313.1| ribulose-phosphate 3-epimerase [Escherichia coli RN587/1]
gi|323376749|gb|ADX49017.1| ribulose-phosphate 3-epimerase [Escherichia coli KO11]
gi|323934624|gb|EGB31024.1| ribulose-phosphate 3-epimerase [Escherichia coli E1520]
gi|323939395|gb|EGB35606.1| ribulose-phosphate 3-epimerase [Escherichia coli E482]
gi|323944392|gb|EGB40467.1| ribulose-phosphate 3-epimerase [Escherichia coli H120]
gi|323950043|gb|EGB45926.1| ribulose-phosphate 3-epimerase [Escherichia coli H252]
gi|323954677|gb|EGB50459.1| ribulose-phosphate 3-epimerase [Escherichia coli H263]
gi|323959614|gb|EGB55266.1| ribulose-phosphate 3-epimerase [Escherichia coli H489]
gi|323966196|gb|EGB61632.1| ribulose-phosphate 3-epimerase [Escherichia coli M863]
gi|323969984|gb|EGB65259.1| ribulose-phosphate 3-epimerase [Escherichia coli TA007]
gi|323974813|gb|EGB69925.1| ribulose-phosphate 3-epimerase [Escherichia coli TW10509]
gi|324009439|gb|EGB78658.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 57-2]
gi|324014637|gb|EGB83856.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 60-1]
gi|324018735|gb|EGB87954.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 117-3]
gi|324111696|gb|EGC05676.1| ribulose-phosphate 3-epimerase [Escherichia fergusonii B253]
gi|324116421|gb|EGC10340.1| ribulose-phosphate 3-epimerase [Escherichia coli E1167]
gi|325498927|gb|EGC96786.1| ribulose-phosphate 3-epimerase [Escherichia fergusonii ECD227]
gi|326337653|gb|EGD61488.1| Ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str. 1044]
gi|326344596|gb|EGD68345.1| Ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str. 1125]
gi|327251015|gb|EGE62708.1| ribulose-phosphate 3-epimerase [Escherichia coli STEC_7v]
gi|330909419|gb|EGH37933.1| ribulose-phosphate 3-epimerase [Escherichia coli AA86]
gi|331041680|gb|EGI13824.1| ribulose-phosphate 3-epimerase [Escherichia coli M605]
gi|331046977|gb|EGI19055.1| ribulose-phosphate 3-epimerase [Escherichia coli M718]
gi|331052889|gb|EGI24922.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
gi|331057498|gb|EGI29484.1| ribulose-phosphate 3-epimerase [Escherichia coli TA143]
gi|331062266|gb|EGI34186.1| ribulose-phosphate 3-epimerase [Escherichia coli TA271]
gi|331067787|gb|EGI39185.1| ribulose-phosphate 3-epimerase [Escherichia coli TA280]
gi|331072618|gb|EGI43943.1| ribulose-phosphate 3-epimerase [Escherichia coli H591]
gi|331077395|gb|EGI48607.1| ribulose-phosphate 3-epimerase [Escherichia coli H299]
gi|332090443|gb|EGI95541.1| ribulose-phosphate 3-epimerase [Shigella boydii 3594-74]
gi|332104282|gb|EGJ07628.1| ribulose-phosphate 3-epimerase [Shigella sp. D9]
gi|332345337|gb|AEE58671.1| ribulose-phosphate 3-epimerase [Escherichia coli UMNK88]
gi|332750369|gb|EGJ80780.1| ribulose-phosphate 3-epimerase [Shigella flexneri 4343-70]
gi|332750884|gb|EGJ81291.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2747-71]
gi|332763632|gb|EGJ93871.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2930-71]
gi|332996427|gb|EGK16054.1| ribulose-phosphate 3-epimerase [Shigella flexneri VA-6]
gi|333012402|gb|EGK31783.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-304]
gi|333013077|gb|EGK32453.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-227]
Length = 225
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|300718761|ref|YP_003743564.1| Ribulose-phosphate 3-epimerase [Erwinia billingiae Eb661]
gi|299064597|emb|CAX61717.1| Ribulose-phosphate 3-epimerase [Erwinia billingiae Eb661]
Length = 228
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S H+ RSL+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRLIPDFAKAGASYITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + I LEVDGGV NI
Sbjct: 126 LDYVMDKVDVILLMSVNPGFGGQSFIPGTLDKLRQVRKLIDQSGYDIRLEVDGGVKVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G+ Y K ++D++
Sbjct: 186 AEIADAGADMFVAGSAIF---GKADYKKVIDDMR 216
>gi|327462727|gb|EGF09049.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1057]
gi|327488827|gb|EGF20626.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1058]
gi|328944607|gb|EGG38768.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1087]
Length = 219
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 139/208 (66%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFESELKKLEETGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|295097002|emb|CBK86092.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 225
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 142/216 (65%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V+++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+ V GS+ F+Q Y K ++++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMRRE 218
>gi|332703764|ref|ZP_08423852.1| ribulose-phosphate 3-epimerase [Desulfovibrio africanus str. Walvis
Bay]
gi|332553913|gb|EGJ50957.1| ribulose-phosphate 3-epimerase [Desulfovibrio africanus str. Walvis
Bay]
Length = 240
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 141/210 (67%), Gaps = 5/210 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PS+L+ADF RL +E++ + + G + +H+DVMDG FVPNI+FG VI++LR+ S
Sbjct: 17 IILSPSLLSADFGRLADELAALEEGGIEWVHWDVMDGVFVPNITFGPPVIKALRNRSKLF 76
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLM+ + +IN DAG ++I H E++ H+ R++ I G K VA+NP T +A
Sbjct: 77 FDCHLMVIKPERYINDFLDAGANLICVHAEATSHLERTVSQIREAGIKAAVALNPATSLA 136
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ E+DM+LIM+VNPGFGGQ I ++ KIR+ + +I ++ ++VDGG+T N
Sbjct: 137 SIEYLLPELDMVLIMSVNPGFGGQVFIPFSLEKIRRLRKMIDEQGAKTLIQVDGGITPEN 196
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
I +V AGA+++V GSSFF Y KR
Sbjct: 197 IAPIVDAGAEVIVSGSSFFKFP---PYGKR 223
>gi|307140070|ref|ZP_07499426.1| ribulose-phosphate 3-epimerase [Escherichia coli H736]
gi|331644085|ref|ZP_08345214.1| ribulose-phosphate 3-epimerase [Escherichia coli H736]
gi|331036379|gb|EGI08605.1| ribulose-phosphate 3-epimerase [Escherichia coli H736]
Length = 225
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDEAGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|94499980|ref|ZP_01306515.1| ribulose-phosphate 3-epimerase [Oceanobacter sp. RED65]
gi|94427838|gb|EAT12813.1| ribulose-phosphate 3-epimerase [Oceanobacter sp. RED65]
Length = 225
Score = 194 bits (493), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 133/199 (66%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR++ +
Sbjct: 8 IAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRNHGVTAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP TP+
Sbjct: 68 DVHLMVSPVDRIIGDFIEAGASYITFHPEASDHIDRSLQIIKDAGCKAGLVFNPATPLHY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
++ V+D++DM+L+M+VNPGFGGQ I +T+ K++QA+ I I LE+DGGV NI
Sbjct: 128 MDYVMDKLDMVLLMSVNPGFGGQSFIPATLDKLKQARKKIDDSGLDIRLEIDGGVKVDNI 187
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ AGAD V GS+ FN
Sbjct: 188 AEIAAAGADTFVAGSAIFN 206
>gi|325261765|ref|ZP_08128503.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
gi|324033219|gb|EGB94496.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
Length = 221
Score = 194 bits (492), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 141/206 (68%), Gaps = 2/206 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +EI+ + + A IH DVMDG FVPNIS G VI+S+R Y+D
Sbjct: 2 IKLAPSILSADFAELRKEITILHLSPADYIHIDVMDGMFVPNISIGLPVIQSIRRYTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +IN AG DIIT H E+ H+ R+++ I G K GV +NP TP++
Sbjct: 62 FDVHLMIEEPYRYINDFVRAGADIITVHAEACRHLHRTIQAIKNQGIKAGVVLNPATPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+E V++++DM+L+MTVNPGFGG I + +PKI + + +I + ++ +EVDGG+ N
Sbjct: 122 SIEYVLEDVDMVLLMTVNPGFGGASFIPNVLPKITRLREMIDEMELTVDIEVDGGIKLEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
+K +++AGA+++V GSS F++ ++
Sbjct: 182 VKDVIKAGANVIVAGSSVFSEDTSVN 207
>gi|297539747|ref|YP_003675516.1| ribulose-phosphate 3-epimerase [Methylotenera sp. 301]
gi|297259094|gb|ADI30939.1| ribulose-phosphate 3-epimerase [Methylotenera sp. 301]
Length = 235
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 144/223 (64%), Gaps = 10/223 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFG---ADVIRSL 57
M + +I PSIL+A+F++LG+EI ++ +G +HFDVMD +VPN++ G + IR +
Sbjct: 1 MDKTFRIAPSILSANFAKLGQEIEDVITSGTDLVHFDVMDNHYVPNLTIGPLVCEAIREI 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ ++ D HLM+ +D I A AG +IITFHPE+S HI RSL + +G K+G+
Sbjct: 61 SKNAGALIDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRSLAMVRDLGCKSGLVF 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSIS 171
NP T ++ L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K++ A+A I R I
Sbjct: 121 NPATSLSYLDHVMDKVDMILLMSVNPGFGGQKFIPETLEKLKLARARIDAYYEKTGRQIW 180
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
LEVDGGV ++NI + +AGAD V GS+ F KG + R N
Sbjct: 181 LEVDGGVNAQNIAEIARAGADTFVAGSAIFT-KGNDADKNRYN 222
>gi|237728705|ref|ZP_04559186.1| ribulose-phosphate 3-epimerase [Citrobacter sp. 30_2]
gi|283835780|ref|ZP_06355521.1| hypothetical protein CIT292_10174 [Citrobacter youngae ATCC 29220]
gi|226909327|gb|EEH95245.1| ribulose-phosphate 3-epimerase [Citrobacter sp. 30_2]
gi|291067945|gb|EFE06054.1| ribulose-phosphate 3-epimerase [Citrobacter youngae ATCC 29220]
Length = 225
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTARALTAGADVVHFDVMDNHYVPNLTIGPMVLKSLRKYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMRNE 218
>gi|157372833|ref|YP_001480822.1| ribulose-phosphate 3-epimerase [Serratia proteamaculans 568]
gi|157324597|gb|ABV43694.1| Ribulose-phosphate 3-epimerase [Serratia proteamaculans 568]
Length = 225
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 143/219 (65%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ +N+ AG +HFDVMD +VPN++ G V ++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCQALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+++ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASYISFHPEASEHVDRTIQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D+ID+IL+M+VNPGFGGQ I T+ K+RQ + +I + R I LEVDGGV NI
Sbjct: 126 LDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKMIDESGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGAD+ V GS+ F++ +R+ D +S LA
Sbjct: 186 AEIAAAGADMFVAGSAIFSKPDY----RRVIDEMRSELA 220
>gi|220936040|ref|YP_002514939.1| Ribulose-phosphate 3-epimerase [Thioalkalivibrio sp. HL-EbGR7]
gi|219997350|gb|ACL73952.1| Ribulose-phosphate 3-epimerase [Thioalkalivibrio sp. HL-EbGR7]
Length = 229
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 134/198 (67%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR + +
Sbjct: 7 IAPSILSADFARLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGVTAPI 66
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S HI R+L+ I G K G+ NP TP++
Sbjct: 67 DVHLMVKPVDRIIPDFAKAGASYITFHPEASEHIDRTLQLIKGEGCKAGLVFNPATPLSY 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ+ I +T+ K+R+A+ I + I LE+DGGV + NI
Sbjct: 127 LDYVMDKVDMILLMSVNPGFGGQKFIPATLDKLREARKRIDESGLDIRLEIDGGVKADNI 186
Query: 184 KSLVQAGADLLVVGSSFF 201
+ + AGAD V GS+ F
Sbjct: 187 REIKAAGADTFVAGSAIF 204
>gi|325278989|ref|YP_004251531.1| ribulose-phosphate 3-epimerase [Odoribacter splanchnicus DSM 20712]
gi|324310798|gb|ADY31351.1| ribulose-phosphate 3-epimerase [Odoribacter splanchnicus DSM 20712]
Length = 219
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PS+LAADF LG+++ + ++ A IH D+MDG FVPNIS+G V+ ++ +
Sbjct: 2 SVIVSPSLLAADFMNLGKDVEMVDRSKADWIHLDIMDGVFVPNISYGLPVVSQIKKIARK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I AG DI+T H E+S H+ R+L+ I A G K GVA+NP TPV
Sbjct: 62 PLDVHLMIVQPERYIEAFHKAGADILTVHLEASTHLHRTLQQIKASGMKAGVALNPHTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI-GKRSISL-EVDGGVTSR 181
++LED+I +ID++LIM+VNPGFGGQ IE ++ K+++ KALI S +L E+DGGV
Sbjct: 122 SLLEDIIQDIDVVLIMSVNPGFGGQSFIEHSLEKVKKLKALIQATHSHTLIEIDGGVNFE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ LV AGAD LV GS F + + L +LK
Sbjct: 182 TGRELVTAGADALVAGSFVFKSEDPEATIAGLKNLK 217
>gi|254787077|ref|YP_003074506.1| ribulose-phosphate 3-epimerase [Teredinibacter turnerae T7901]
gi|237683827|gb|ACR11091.1| ribulose-phosphate 3-epimerase [Teredinibacter turnerae T7901]
Length = 234
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 135/201 (67%), Gaps = 3/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+AD +RLGEE + + +AGA IHFDVMD +VPN++FG V +++R+Y +
Sbjct: 11 SYSIAPSILSADLARLGEECTAVLEAGADMIHFDVMDNHYVPNMTFGPVVCKAIRNYGIT 70
Query: 64 V-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D I A+AG ITFHPE++ H+ RSL I + G K G+ +NP TP
Sbjct: 71 AHIDVHLMVEPVDDLITRFAEAGASSITFHPEATRHVDRSLELIQSHGCKGGLVLNPATP 130
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTS 180
++ +E ++++IDM+L+M+VNPGFGGQ I + K+ +A+AL+ + + LEVDGGV
Sbjct: 131 LSTIEWLVEKIDMLLLMSVNPGFGGQSFIPYVLQKVAKARALLDQHGSAARLEVDGGVKV 190
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
NI L AGAD V GS+ F
Sbjct: 191 DNIAELAAAGADTFVAGSAIF 211
>gi|77024221|gb|ABA55581.1| chloroplast ribulose phosphate epimerase [Pavlova lutheri]
Length = 221
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 133/186 (71%), Gaps = 3/186 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+RLG+E++N+ +GA +HFDVMD +VPN++ G V ++LR +
Sbjct: 33 MASDFLIAPSILSADFARLGDEVTNVLASGADVVHFDVMDNHYVPNLTIGPMVCKALRKH 92
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I A+AG ITFHPE++ HI RSL+ + ++G K+G+ NP
Sbjct: 93 GVTAPIDVHLMVSPVDRIIGDFAEAGASYITFHPEATGHIDRSLQLVKSLGCKSGLVFNP 152
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ LE V+D++D+IL+M+VNPGFGGQ I +T+ K+RQA+ALI K R I LE+DGG
Sbjct: 153 ATPLDCLEYVMDKVDIILLMSVNPGFGGQAFIPATLDKLRQARALIDKSGRDIRLEIDGG 212
Query: 178 VTSRNI 183
VT +NI
Sbjct: 213 VTPKNI 218
>gi|171779176|ref|ZP_02920147.1| hypothetical protein STRINF_01024 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|118421050|dbj|BAF37257.1| putative ribulose phosphate 3 epimerase [Streptococcus bovis]
gi|171282232|gb|EDT47659.1| hypothetical protein STRINF_01024 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 220
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 131/198 (66%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNI+FGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNITFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + ++ A AG DI+T H ES+ HI +L+ I G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERFVDAFAQAGADIMTIHAESTLHIHGALQKIKKAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I + K+++ + ++ +EVDGGV ++ I
Sbjct: 125 IEPVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVQKVAKIRDEKGYDFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ QAGA++ V GS F
Sbjct: 185 KACYQAGANVFVAGSYLF 202
>gi|322377597|ref|ZP_08052087.1| ribulose-phosphate 3-epimerase [Streptococcus sp. M334]
gi|321281362|gb|EFX58372.1| ribulose-phosphate 3-epimerase [Streptococcus sp. M334]
Length = 218
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVESLRHHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRKEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGA + V GS F KGE++ +R+ L+K
Sbjct: 185 AQAKAAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 216
>gi|295677787|ref|YP_003606311.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1002]
gi|295437630|gb|ADG16800.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1002]
Length = 254
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 138/225 (61%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R + D
Sbjct: 30 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVDV 89
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP T +
Sbjct: 90 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASEHIDRTLSLIRDHGCKAGLVFNPATSL 149
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEVDGG
Sbjct: 150 NYLDHVMDKVDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYNERTGRDIHLEVDGG 209
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD V GS+ F Q K + D ++ALA
Sbjct: 210 VKVDNIAEIAAAGADTFVAGSAIFGQPDH----KVVIDKMRAALA 250
>gi|165977257|ref|YP_001652850.1| D-ribulose-phosphate-3 epimerase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877358|gb|ABY70406.1| D-ribulose-phosphate-3 epimerase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 224
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 139/212 (65%), Gaps = 6/212 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE+++ + KAG IHFDVMD FVPN++FG + ++LR Y +
Sbjct: 8 IAPSILSADLARLGEDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRDYGITAEI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ I A AG + ITFHPE++ HI R+L+ I G K+G+ NP TP++
Sbjct: 68 DVHLMVKPVERLIPDFAKAGANYITFHPEATDHIDRTLQMIRDHGCKSGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+++A+ I K I LE+DGGV NI
Sbjct: 128 LDYVMDKVDMILLMGVNPGFGGQKFIPATLEKLQEARRRIDKSGYPIRLEIDGGVKIDNI 187
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKR 212
+ AGAD V GS+ F N K I +R
Sbjct: 188 AEIAAAGADTFVAGSAIFDRPNYKAVIDQMRR 219
>gi|261419376|ref|YP_003253058.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y412MC61]
gi|319766191|ref|YP_004131692.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y412MC52]
gi|261375833|gb|ACX78576.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y412MC61]
gi|317111057|gb|ADU93549.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y412MC52]
Length = 218
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 138/211 (65%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RL EEI ++ + GA IH D+MDG FVPN++FG V+ ++R +
Sbjct: 2 IRIAPSILSADFARLAEEIRSVEEGGADWIHVDIMDGHFVPNLTFGPPVVAAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D +I A AG D+I+ H E+ H+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIADPDRYIPAFAKAGADVISVHVEACVHLHRTIHFIKEQGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ VI ++D++L+MTVNPGFGGQ I + +PKIR+ + + + + +EVDGG+ +
Sbjct: 122 MIRHVIGDVDLVLLMTVNPGFGGQAFIPAVVPKIREVARMASEQNKEVDIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V+AGA++LV GS+ +N++ + + L
Sbjct: 182 APLCVEAGANVLVAGSAIYNERDRAAAIRTL 212
>gi|125718903|ref|YP_001036036.1| Pentose-5-phosphate-3-epimerase [Streptococcus sanguinis SK36]
gi|323350563|ref|ZP_08086225.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis VMC66]
gi|125498820|gb|ABN45486.1| Pentose-5-phosphate-3-epimerase, putative [Streptococcus sanguinis
SK36]
gi|322123245|gb|EFX94930.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis VMC66]
gi|324992520|gb|EGC24441.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK405]
gi|324995951|gb|EGC27862.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK678]
gi|325688929|gb|EGD30937.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK115]
gi|327460744|gb|EGF07079.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1]
gi|327472465|gb|EGF17896.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK408]
gi|332358475|gb|EGJ36300.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK49]
gi|332365151|gb|EGJ42914.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1059]
Length = 219
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|88658377|ref|YP_506912.1| ribulose-phosphate 3-epimerase [Ehrlichia chaffeensis str.
Arkansas]
gi|88599834|gb|ABD45303.1| ribulose-phosphate 3-epimerase [Ehrlichia chaffeensis str.
Arkansas]
Length = 228
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 140/211 (66%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SIL+ADF+ LG+ + +T AG IH DVMDG FVPNI+ G V+ +++ Y+
Sbjct: 14 VEVSSSILSADFANLGKSVEMLTDAGVDYIHVDVMDGNFVPNITIGPVVVSAIKKYTTIP 73
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+S ++I DAG D+IT H ES H+ R ++ I + K G+++ P +
Sbjct: 74 FDVHLMINSPGNYIEAFVDAGADMITIHAESDIHLDRIIQKIKSYKKSAGLSLVPTSHYN 133
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
ILE +I E+D++LIMTVNPGFGGQQ I S + KI + LI K S+ + VDGGV +N
Sbjct: 134 ILEYIIFELDLVLIMTVNPGFGGQQFITSQLDKISCVRNLIEKYSLKTKIAVDGGVNIKN 193
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
KS+++AGAD+LVVGS+ FN + Y ++L
Sbjct: 194 AKSVIEAGADILVVGSAIFNANNMLDYVQQL 224
>gi|300215487|gb|ADJ79900.1| Ribulose-phosphate 3-epimerase [Lactobacillus salivarius CECT 5713]
Length = 215
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 142/215 (66%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ I AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADMLNLGADVQKIEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PHI R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHIHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R+++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K +AGA + V GS FN E ++A+R+N L+
Sbjct: 181 VKLCREAGATVAVAGSYVFNSGNE-THAERINKLR 214
>gi|149909438|ref|ZP_01898093.1| ribulose-phosphate 3-epimerase [Moritella sp. PE36]
gi|149807548|gb|EDM67497.1| ribulose-phosphate 3-epimerase [Moritella sp. PE36]
Length = 224
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+A+F+ LG+E+ + AGA IHFDVMD +VPN++ G + ++LR + +
Sbjct: 6 IAPSILSANFASLGQEVDAVLAAGADVIHFDVMDNHYVPNLTIGPMICKALRDHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D IN A AG +ITFH E+S H+ RSL+ I G K G+ NP TP+
Sbjct: 66 DVHLMVRPVDHMINEFAKAGASMITFHAEASDHVDRSLQLIKEHGLKAGLVFNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I ST+ K+R + LI R I LE+DGGV NI
Sbjct: 126 LDYVMDKLDMILLMSVNPGFGGQSFIPSTLQKLRDVRQLIDASGRDIILEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD+ V GS+ + Q+ Y K +++++
Sbjct: 186 REIAEAGADMFVAGSAIYGQE---DYKKVIDEMR 216
>gi|307150066|ref|YP_003885450.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7822]
gi|306980294|gb|ADN12175.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7822]
Length = 235
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 141/220 (64%), Gaps = 7/220 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI + PSIL+ADFSRLGEEI I KAGA +H DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 9 SIVVAPSILSADFSRLGEEIQAIDKAGADWVHVDVMDGRFVPNITIGPLIVEAIRPYTKK 68
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ H E +SPH+ R+L I GK+ GV +NP T
Sbjct: 69 PLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIRECGKQAGVVLNPST 128
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ +E V++ D++LIM+VNPGFGGQ I +PKI++ + + +R + +EVDGG+
Sbjct: 129 PLDFIEYVLELCDLVLIMSVNPGFGGQSFIPEVVPKIQKLRQMCDERGLDPWIEVDGGLK 188
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ F Y+K + ++ S
Sbjct: 189 PDNTWQVLEAGANAIVAGSAVFKAS---DYSKAIEGIRHS 225
>gi|261344690|ref|ZP_05972334.1| ribulose-phosphate 3-epimerase [Providencia rustigianii DSM 4541]
gi|282567610|gb|EFB73145.1| ribulose-phosphate 3-epimerase [Providencia rustigianii DSM 4541]
Length = 224
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 131/200 (65%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++FGA + +LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTFGAPICEALRKYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG I+FHPE+S H+ R+L+ I G G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGATHISFHPEASEHVDRTLQLIKESGCTAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I T+ K+RQ + +I + I LEVDGGV NI
Sbjct: 126 LDYVMDKVDMILLMSVNPGFGGQSFIPQTLNKLRQVRKMIDESGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD V GS+ F Q
Sbjct: 186 AEIAAAGADTFVAGSAIFGQ 205
>gi|332360007|gb|EGJ37821.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1056]
Length = 219
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|317049883|ref|YP_004117531.1| ribulose-phosphate 3-epimerase [Pantoea sp. At-9b]
gi|316951500|gb|ADU70975.1| ribulose-phosphate 3-epimerase [Pantoea sp. At-9b]
Length = 227
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDELIPAFAKAGASYITFHPEASQHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQA+ LI + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLRQARRLIDQSGYDIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G Y K ++ ++
Sbjct: 186 GQIAAAGADMFVAGSAIF---GHPDYKKVIDAMR 216
>gi|332365860|gb|EGJ43617.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK355]
Length = 219
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|325662237|ref|ZP_08150852.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086038|ref|ZP_08335121.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471489|gb|EGC74710.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406961|gb|EGG86466.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 220
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 137/197 (69%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF++LGE++ + GA+ IHFDVMDG FVP+ISFG V+ S+R+ D +FD
Sbjct: 5 LAPSILAADFTKLGEQMKETEREGAQYIHFDVMDGKFVPSISFGMPVLASIRNAVDQIFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI ++ AG DIIT H E+ ++ +L I A G K ++I P+TPVA L
Sbjct: 65 VHLMIEEPIRYVEEFQKAGADIITVHLEACSDVKATLEKIKACGAKAAISICPDTPVAEL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E ++ +DM+LIM+V+PGFGGQ I S++ KIR+ +AL+ + + +EVDGG+ + N++
Sbjct: 125 EPYVELVDMVLIMSVHPGFGGQSFIPSSLEKIRETRALLDRVNSTADIEVDGGIYTTNVR 184
Query: 185 SLVQAGADLLVVGSSFF 201
+++AGA+++V GS+ F
Sbjct: 185 EVLEAGANVIVAGSAIF 201
>gi|228472739|ref|ZP_04057497.1| ribulose-phosphate 3-epimerase [Capnocytophaga gingivalis ATCC
33624]
gi|228275790|gb|EEK14556.1| ribulose-phosphate 3-epimerase [Capnocytophaga gingivalis ATCC
33624]
Length = 215
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 130/198 (65%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L +I + ++ A H D+MDG FVPNIS+G V+++++ ++ D
Sbjct: 3 IAPSLLAADFANLQRDIEMVNESQADWFHLDIMDGLFVPNISYGMPVVKAIKEHAKKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I+ A G ++ H E+ H+ R+++ I G K GVA+NP TP+ ++
Sbjct: 63 VHLMIVDPDRYIHTFAQLGSSFLSVHYEACTHLHRTVQAIRQEGMKAGVALNPHTPITVM 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++D++LIM+VNPGFGGQ IE+T K+ QAK LI K +EVDGGV + N
Sbjct: 123 EDIITDVDLLLIMSVNPGFGGQSFIENTYKKVSQAKELITKTGSKALIEVDGGVNATNTP 182
Query: 185 SLVQAGADLLVVGSSFFN 202
LV AGAD+LV GS FN
Sbjct: 183 KLVAAGADVLVAGSFVFN 200
>gi|91791635|ref|YP_561286.1| ribulose-phosphate 3-epimerase [Shewanella denitrificans OS217]
gi|91713637|gb|ABE53563.1| ribulose-5-phosphate 3-epimerase [Shewanella denitrificans OS217]
Length = 222
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 132/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLG+++ + AG +HFDVMD +VPN++ G V +LR+Y +
Sbjct: 6 IAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCTALRNYGITADI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG IITFHPE+S HI R+L+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNPATPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ +A I I LEVDGGV NI
Sbjct: 126 LDHVMDKLDVILLMSVNPGFGGQSFIPATLDKLRQVRARIDASGFDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ FNQ
Sbjct: 186 AEIAAAGADMFVAGSAIFNQ 205
>gi|163815230|ref|ZP_02206607.1| hypothetical protein COPEUT_01390 [Coprococcus eutactus ATCC 27759]
gi|158449425|gb|EDP26420.1| hypothetical protein COPEUT_01390 [Coprococcus eutactus ATCC 27759]
Length = 228
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 137/204 (67%), Gaps = 2/204 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I + PS+L+ DF+ + + I + +A +H DVMDG FVPNISFGA VI+ LR
Sbjct: 1 MGKEIILSPSLLSVDFAHIADGIKELDRAEVPALHLDVMDGAFVPNISFGAPVIKCLRKE 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ +FD HLM+ +I+ AG D +T H E H+ R++ I G K GVA+NP
Sbjct: 61 TNMIFDVHLMVEEPVRYIDDFKKAGADWVTVHAECCKHLHRTITAIKEAGMKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV++++ V+DE+DM+L+M+VNPGFGGQ I S++ KI + + LI +R+ + +EVDGGV
Sbjct: 121 TPVSVIDYVLDEVDMVLVMSVNPGFGGQSFIPSSLRKIVEVRKLIDERNLDVRIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
+N+ ++++GAD++V GS+ FN
Sbjct: 181 NLKNVGEVIKSGADVIVAGSAVFN 204
>gi|157692259|ref|YP_001486721.1| ribulose-phosphate 3-epimerase [Bacillus pumilus SAFR-032]
gi|157681017|gb|ABV62161.1| ribulose-phosphate 3-epimerase [Bacillus pumilus SAFR-032]
Length = 216
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 137/202 (67%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ L ++I ++ + GA IH DVMDG FVPN++FG +V+ ++R ++
Sbjct: 2 VYIAPSILSADFANLEKDIRDVEQGGADYIHIDVMDGHFVPNMTFGPNVVEAIRPHTRLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DII+ H E+ PH+ R+++ I G K GV +NP TPV+
Sbjct: 62 LDVHLMIEQPDRYIPAFAKAGADIISVHVEACPHLHRTIQHIKEQGVKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+E V++++D++L MTVNPGFGGQ I S + K+++ KAL ++ ++ +E+DGGV
Sbjct: 122 HIEHVLEDVDLVLFMTVNPGFGGQAFIPSVLKKVKEVKALSEQKGLTDLLIEIDGGVNVE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
KS +AGA+LLV GS+ + +
Sbjct: 182 TAKSCKEAGANLLVAGSAVYGE 203
>gi|288553109|ref|YP_003425044.1| ribulose-phosphate 3-epimerase [Bacillus pseudofirmus OF4]
gi|288544269|gb|ADC48152.1| ribulose-phosphate 3-epimerase [Bacillus pseudofirmus OF4]
Length = 215
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 140/215 (65%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+A+F+ LGE+I + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSANFATLGEDIKEVEAGGADYIHVDVMDGHFVPNITIGPLIVDAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A +G DIIT H E+ PH+ R++ I G K GV +NP TP
Sbjct: 62 LDVHLMIENPDQYIPQFAKSGADIITVHVEACPHLHRTIHLIKENGCKAGVVLNPHTPFD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++++DMIL MTVNPGFGGQ I S +PKI++A + I ++ + +EVDGGV
Sbjct: 122 AVKPIVEDLDMILFMTVNPGFGGQSFISSVLPKIKEASSYIKEKGLDVEIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K V+AGA++LV GS+ +N++ AK + D++
Sbjct: 182 AKQCVEAGANVLVAGSAIYNKE---DRAKAIADIR 213
>gi|209516527|ref|ZP_03265381.1| Ribulose-phosphate 3-epimerase [Burkholderia sp. H160]
gi|209502968|gb|EEA02970.1| Ribulose-phosphate 3-epimerase [Burkholderia sp. H160]
Length = 238
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 138/225 (61%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R + D
Sbjct: 14 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVDV 73
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP T +
Sbjct: 74 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLSLIRDHGCKAGLVFNPATSL 133
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEVDGG
Sbjct: 134 NYLDHVMDKVDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYNERTGRDIHLEVDGG 193
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD V GS+ F Q K + D ++ALA
Sbjct: 194 VKVDNIAEIAAAGADTFVAGSAIFGQPDH----KVVIDKMRAALA 234
>gi|242278711|ref|YP_002990840.1| ribulose-phosphate 3-epimerase [Desulfovibrio salexigens DSM 2638]
gi|242121605|gb|ACS79301.1| ribulose-phosphate 3-epimerase [Desulfovibrio salexigens DSM 2638]
Length = 222
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 136/208 (65%), Gaps = 5/208 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ DFSRL +E+ + +AG K H DVMDG FVPNI+FG VI+S+R + FD
Sbjct: 8 ISPSLLSCDFSRLADELKALEEAGLKWAHLDVMDGKFVPNITFGPPVIKSMRKECNLFFD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + +I+ DAG D++ H ES+ H+ R++ I G K +A+NP TP+ +
Sbjct: 68 CHLMIEQPERYIDEFCDAGADLLCIHAESTVHLERAVAAIAEKGVKPAIALNPATPLESI 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ +I ++ M+LIM+VNPGFGGQ+ I K+R +A+I + +++DGGVT N +
Sbjct: 128 KYLIPQLHMVLIMSVNPGFGGQKYIPFCTQKVRDLRAMIDEMGADTLIQLDGGVTMENCR 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKR 212
LV+AGAD+LV GS+FF YA+R
Sbjct: 188 ELVEAGADVLVSGSAFFKYP---PYAER 212
>gi|260599687|ref|YP_003212258.1| ribulose-phosphate 3-epimerase [Cronobacter turicensis z3032]
gi|260218864|emb|CBA34219.1| Ribulose-phosphate 3-epimerase [Cronobacter turicensis z3032]
Length = 225
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 142/214 (66%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTARVLAAGADVVHFDVMDNHYVPNLTIGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I ADAG IITFHPE+S HI RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRLIPDFADAGASIITFHPEASEHIDRSLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+++ + I R I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLEKLKEVRQRIDASGRDIRLEVDGGVKVSNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGAD+ V GS+ FN E Y +ND++
Sbjct: 186 GAIAAAGADMFVAGSAIFN---EPDYQNVINDMR 216
>gi|288933228|ref|YP_003437287.1| ribulose-phosphate 3-epimerase [Klebsiella variicola At-22]
gi|290512032|ref|ZP_06551400.1| ribulose-phosphate 3-epimerase [Klebsiella sp. 1_1_55]
gi|288887957|gb|ADC56275.1| ribulose-phosphate 3-epimerase [Klebsiella variicola At-22]
gi|289775822|gb|EFD83822.1| ribulose-phosphate 3-epimerase [Klebsiella sp. 1_1_55]
Length = 225
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ RSL+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV + NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGVKASNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGAD+ V GS+ F Q K++ D +S LA
Sbjct: 186 GEIAAAGADMFVAGSAIFGQPDY----KKVIDQMRSELA 220
>gi|159465721|ref|XP_001691071.1| ribulose phosphate-3-epimerase, chloroplast precursor
[Chlamydomonas reinhardtii]
gi|158279757|gb|EDP05517.1| ribulose phosphate-3-epimerase, chloroplast precursor
[Chlamydomonas reinhardtii]
Length = 265
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+ADFSRLG+E+ I +AG +H DVMDG FVPNI+ G V+ +LR +D V
Sbjct: 42 IIVSPSILSADFSRLGDEVRAIDQAGCDWVHIDVMDGRFVPNITIGPLVVEALRPVTDKV 101
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + I A AG DII+ H E S H+ R+L + +G K GV +NP T
Sbjct: 102 LDVHLMIVEPELRIPDFAKAGADIISVHAEQSSTIHLHRTLNMVKDLGCKAGVVLNPGTS 161
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E+V+D +D+ILIM+VNPGFGGQ+ IES + KIR K + ++ ++ +EVDGGVT
Sbjct: 162 LSTIEEVLDVVDLILIMSVNPGFGGQKFIESQVAKIRNLKRMCNEKGVNPWIEVDGGVTP 221
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N ++ AGA+ LV GS+ F K SY ++ +K S
Sbjct: 222 ENAYKVIDAGANALVAGSAVFKAK---SYRDAIHGIKVS 257
>gi|229815382|ref|ZP_04445717.1| hypothetical protein COLINT_02429 [Collinsella intestinalis DSM
13280]
gi|229809162|gb|EEP44929.1| hypothetical protein COLINT_02429 [Collinsella intestinalis DSM
13280]
Length = 226
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 148/221 (66%), Gaps = 7/221 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ SIQI PSIL+AD + L ++ I+ A IH DVMDG FVPN+S+G ++++ +S
Sbjct: 1 MSASIQISPSILSADMANLAHDLKRISNA--DLIHVDVMDGHFVPNLSYGTAIVKACKSA 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLM+S+ D +N DAG D++T H E+S H+ R++ I + G K GV +NP
Sbjct: 59 TDIPLDVHLMVSNPDDTVNWYIDAGADLVTVHYEASTHLHRTVSHIKSRGCKAGVVLNPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LED++DE+DM+L+M+VNPGFGGQ+ I T+ K+R+ +A+ + + +E+DGGV
Sbjct: 119 TPVDVLEDILDELDMVLLMSVNPGFGGQKFIPRTLDKLRRLRAMCVEHGVDPLIEIDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N + L AGA +LV GS+ F G A+ + D++++
Sbjct: 179 GAGNAEELGAAGATVLVAGSAVF---GAEDPAQAVEDIRQA 216
>gi|22299912|ref|NP_683159.1| ribulose-phosphate 3-epimerase [Thermosynechococcus elongatus BP-1]
gi|22296097|dbj|BAC09921.1| pentose-5-phosphate-3-epimerase [Thermosynechococcus elongatus
BP-1]
Length = 231
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 143/219 (65%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 6 VVIAPSILSADFSRLGEEIQAVDRAGADWIHVDVMDGRFVPNITIGPLIVEAIRPLTQKP 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP +P
Sbjct: 66 LDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLCQIRELGKQAGVVLNPSSP 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++E V++ D++LIM+VNPGFGGQ+ I + +PKIR+ + L +R + +EVDGG+
Sbjct: 126 LELIEYVLEVCDLVLIMSVNPGFGGQKFIPAVLPKIRRLRQLCEERGLDPWIEVDGGLKV 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN YA + ++ S
Sbjct: 186 DNTWQVLEAGANAIVAGSAVFNAP---DYAAAIAGIRNS 221
>gi|307823232|ref|ZP_07653462.1| ribulose-phosphate 3-epimerase [Methylobacter tundripaludum SV96]
gi|307736007|gb|EFO06854.1| ribulose-phosphate 3-epimerase [Methylobacter tundripaludum SV96]
Length = 223
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 139/215 (64%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL+A+F++LGEE+ N+ KAGA +HFDVMD FVPN++ G V +LR + +
Sbjct: 5 WIAPSILSANFAKLGEEVDNVLKAGADVVHFDVMDNHFVPNLTIGPLVCEALRKHGVTAP 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG IITFHPE+S HI R+L+ I G K G+ NP TP+
Sbjct: 65 IDVHLMVEPVDRLIPDFAKAGASIITFHPEASVHIDRTLQLIKDCGCKAGLVFNPGTPLH 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ V+D++DMIL+M+VNPGFGGQ I S + K+R+ + I I LE+DGGV N
Sbjct: 125 YLDYVMDKLDMILLMSVNPGFGGQSFIPSALDKLREVRTRIDNSGLDIRLEIDGGVKVDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+ + AGAD V GS+ F+Q Y K +++++
Sbjct: 185 IREIKAAGADTFVAGSAIFSQP---DYKKVIDEMR 216
>gi|222153741|ref|YP_002562918.1| ribulose-phosphate 3-epimerase [Streptococcus uberis 0140J]
gi|222114554|emb|CAR43499.1| putative ribulose-phosphate 3-epimerase [Streptococcus uberis
0140J]
Length = 220
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 135/210 (64%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + ++ A AG DI+T H ES+ HI +L+ I + G K GV INP TPV+
Sbjct: 65 DCHLMVVDPERYVEAYAQAGADIMTIHTESTKHIHGALQKIKSAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++ +D +LIMTVNPGFGGQ I + K+ + +L ++ +EVDGGV ++ I
Sbjct: 125 LKPVLNLVDQVLIMTVNPGFGGQAFIPECLEKVEEVASLRETLGLTFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ +AGA++ V GS F +S + L
Sbjct: 185 AACQKAGANIFVAGSYLFKASDLVSQVQTL 214
>gi|309798996|ref|ZP_07693253.1| ribulose-phosphate 3-epimerase [Streptococcus infantis SK1302]
gi|308117400|gb|EFO54819.1| ribulose-phosphate 3-epimerase [Streptococcus infantis SK1302]
Length = 218
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ KIR+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKIRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQALRKQ 216
>gi|327468440|gb|EGF13925.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK330]
Length = 219
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFEAELRKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|306830177|ref|ZP_07463361.1| ribulose-phosphate 3-epimerase [Streptococcus mitis ATCC 6249]
gi|304427703|gb|EFM30799.1| ribulose-phosphate 3-epimerase [Streptococcus mitis ATCC 6249]
Length = 239
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ KIR+ AL ++ +S +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKIRELVALSQEKGLSFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 237
>gi|90962920|ref|YP_536835.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius UCC118]
gi|90822114|gb|ABE00752.1| Ribulose-phosphate 3-epimerase [Lactobacillus salivarius UCC118]
gi|300215399|gb|ADJ79812.1| Ribulose-phosphate 3-epimerase [Lactobacillus salivarius CECT 5713]
Length = 215
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 142/215 (66%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ + AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADMLNLGADVQKVEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PHI R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHIHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R+++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K +AGA + V GS FN E ++A+R+N L+
Sbjct: 181 VKLCREAGATVAVAGSYVFNSGNE-THAERINKLR 214
>gi|261341885|ref|ZP_05969743.1| ribulose-phosphate 3-epimerase [Enterobacter cancerogenus ATCC
35316]
gi|288315786|gb|EFC54724.1| ribulose-phosphate 3-epimerase [Enterobacter cancerogenus ATCC
35316]
Length = 225
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 142/214 (66%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ ++ AGA +HFDVMD +VPN++ G V+++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTASALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDHVMDKLDVILLMSVNPGFGGQSFIPHTLDKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|304311725|ref|YP_003811323.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium HdN1]
gi|301797458|emb|CBL45678.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium HdN1]
Length = 223
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 130/199 (65%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLG E+ + AGA +HFDVMD +VPN++ G V ++LR Y S
Sbjct: 6 IAPSILSADFARLGAEVDAVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRKYGVSAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP TP+
Sbjct: 66 DVHLMVSPVDRMIADFIEAGATYITFHPEASTHIDRSLQMIRDGGCKAGLVFNPATPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++DM+L+M+VNPGFGGQ+ I ST+ K+R +A I I LEVDGGV NI
Sbjct: 126 LDYVMDKLDMVLLMSVNPGFGGQKFIPSTLDKLRAVRARIDVSGLPIRLEVDGGVGVGNI 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ AGAD V GS+ FN
Sbjct: 186 AEIAAAGADTFVAGSAIFN 204
>gi|312279111|gb|ADQ63768.1| Pentose-5-phosphate-3-epimerase, putative [Streptococcus
thermophilus ND03]
Length = 219
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 133/214 (62%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ I +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 2 SYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H E++ HI +++ I A G K GV INP TPV
Sbjct: 62 VFDCHLMVVDPERYVTAYAQAGADIMTIHVEATKHIHGAIQKIKAAGMKAGVVINPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
L V+ +D +LIMTVNPGFGG I + K+ Q L G S +EVDGGV ++
Sbjct: 122 EALIPVLALVDQVLIMTVNPGFGGHTFIPEMMSKVEQVVELRQKGGYSFDIEVDGGVDNK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 182 TIAACAKAGANVFVAGSYLFKNHDLTAQVQTLRD 215
>gi|220903759|ref|YP_002479071.1| Ribulose-phosphate 3-epimerase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868058|gb|ACL48393.1| Ribulose-phosphate 3-epimerase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 242
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADFSRL EE+ + AG +H DVMDG FVPNI+FG +I++LR S FD
Sbjct: 3 LSPSLLSADFSRLAEELQALEAAGVTWLHLDVMDGAFVPNITFGPPLIKALRPGSGLFFD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +I DAG D++ H E+ H +R+L I MG + GVA+NP T + +
Sbjct: 63 VHLMVENPARYIQDFRDAGADMLVIHTEADRHPQRTLAAIRDMGCRAGVALNPGTDLGAI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+++++DM+L+M+VNPGF GQ I +T K+R A+ L+ G + ++VDGGV N
Sbjct: 123 RWLVNDLDMLLVMSVNPGFSGQAFIPATFDKVRSARRLLDACGGEDVLIQVDGGVCPENT 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
LV+AGAD+LV GS+FF K Y RL KS
Sbjct: 183 AQLVEAGADVLVSGSAFFGHK---PYDARLAAFMKS 215
>gi|258590989|emb|CBE67284.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [NC10 bacterium 'Dutch sediment']
Length = 221
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 143/219 (65%), Gaps = 7/219 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ + AGA IH DVMD FVPN++ G V+ ++R ++
Sbjct: 3 TYKIAPSILSADFARLGEEVRAVDAAGADYIHVDVMDNHFVPNLTIGPAVVAAIRPHTAK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +D I A +G DIIT HPE++ H+ R+++ I +G + GV++NP +P+
Sbjct: 63 PLDVHLMIEPVDPIIPDFAKSGADIITVHPEATRHLDRTIQLIKGLGCRAGVSLNPASPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK---IRQAKALIGKRSISLEVDGGVTS 180
A ++ V++++D++L+M+VNPGFGGQ I+ +PK IR+ IGK +I LEVDGGV
Sbjct: 123 AWMDHVLEQLDLVLVMSVNPGFGGQSFIDYVLPKITVIRRRIDAIGK-AIDLEVDGGVKV 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N++ + AGAD V GS+ F G YA + + +
Sbjct: 182 ENVRRVADAGADTFVAGSAVF---GTPDYAATIARFRTA 217
>gi|239813513|ref|YP_002942423.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus S110]
gi|239800090|gb|ACS17157.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus S110]
Length = 232
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 136/211 (64%), Gaps = 9/211 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP +I PSIL+ADF+ LG+E++ + AGA IHFDVMD +VPN++FG + ++L+ Y+
Sbjct: 4 TP-FRIAPSILSADFAHLGDELAKVIAAGADWIHFDVMDNHYVPNLTFGPMICKALKPYA 62
Query: 62 DSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+ D HLMI +D+ A+AG D I+FHP++SPH+ RS++ I G K G+
Sbjct: 63 RTADGEAVPIDVHLMIQPVDALAASFAEAGADYISFHPDASPHVNRSIQAIKGAGCKAGL 122
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLE 173
NP + L+ ID+ID+ILIM+VNPGFGGQ I+S + KI A+ I + R I LE
Sbjct: 123 VFNPGLGLEALDWAIDDIDLILIMSVNPGFGGQSFIDSALRKIELARKRIEQSGRDIRLE 182
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
VDGG+ NI + AGAD V GS+ FN K
Sbjct: 183 VDGGIKVDNIARVASAGADTFVAGSAIFNAK 213
>gi|332749517|gb|EGJ79934.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-671]
gi|332996670|gb|EGK16295.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-272]
gi|332997188|gb|EGK16804.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-218]
Length = 221
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 137/210 (65%), Gaps = 6/210 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGAD+ V GS+ F+Q Y K L
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKSL 212
>gi|325286935|ref|YP_004262725.1| ribulose-phosphate 3-epimerase [Cellulophaga lytica DSM 7489]
gi|324322389|gb|ADY29854.1| ribulose-phosphate 3-epimerase [Cellulophaga lytica DSM 7489]
Length = 219
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LAADF L ++ + + A H D+MDG FVPNIS+G V++S+ ++
Sbjct: 5 KIAPSLLAADFGNLQRDVEMVNNSEADWHHIDIMDGVFVPNISYGMPVLKSIAQHATKTL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D +I A+ G ++++ H E+ H+ R+L+ I A G GVA+NP T V +
Sbjct: 65 DVHLMIVDPDRYIKTFAELGANVLSVHYEACTHLHRTLQAIKAEGMMAGVALNPHTNVNL 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED+I++ID++ +M+VNPGFGGQ IE+T K++ K LI K + + +E+DGGVTS+N
Sbjct: 125 LEDIINDIDVVCLMSVNPGFGGQSFIENTYNKVKALKELITKNNATTLIEIDGGVTSKNA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K+LV AGAD+LV GS F K L ++
Sbjct: 185 KALVDAGADVLVAGSFVFKSDNPTDTIKNLKEI 217
>gi|271502307|ref|YP_003335333.1| ribulose-phosphate 3-epimerase [Dickeya dadantii Ech586]
gi|270345862|gb|ACZ78627.1| ribulose-phosphate 3-epimerase [Dickeya dadantii Ech586]
Length = 225
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 137/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTARALAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE+S H+ R+L+ I + G K G+ NP
Sbjct: 60 GITAPVDVHLMVKPVDRLIPDFAEAGASFITFHPEASEHVDRTLQLIKSHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T ++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + I LEVDGG
Sbjct: 120 ATSLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ F Q
Sbjct: 180 VKVDNIAQIAAAGADMFVAGSAIFGQ 205
>gi|77361625|ref|YP_341200.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas haloplanktis
TAC125]
gi|76876536|emb|CAI87758.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas haloplanktis
TAC125]
Length = 227
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 139/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF++LGE++ ++ AGA +HFDVMD +VPN++ G V ++LR+Y +
Sbjct: 10 IAPSILSADFAKLGEDVDSVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRNYGIKAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS I A+AG IITFHPE+S HI R+L+ I G + G+ NP T ++
Sbjct: 70 DVHLMVKPVDSLIPQFAEAGASIITFHPEASEHIDRTLQLIKDHGCQAGLVFNPGTSLSF 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D+ID+ILIM+VNPGFGGQ I T+ K+RQAK I R+I LEVDGG+ NI
Sbjct: 130 LDHVMDKIDVILIMSVNPGFGGQSFIAHTLEKLRQAKQRIVESGRNIRLEVDGGIKVDNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +AGAD+ V GS+ FNQ
Sbjct: 190 AAAAEAGADMFVAGSAIFNQ 209
>gi|154505946|ref|ZP_02042684.1| hypothetical protein RUMGNA_03488 [Ruminococcus gnavus ATCC 29149]
gi|153793964|gb|EDN76384.1| hypothetical protein RUMGNA_03488 [Ruminococcus gnavus ATCC 29149]
Length = 220
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF RLGE++ AGA+ IHFDVMDG FVP+ISFG V+ S++ ++ V
Sbjct: 4 RIAPSILSADFKRLGEQLKETEAAGAEYIHFDVMDGMFVPSISFGMPVLASIKGHTQQVM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ ++ A AG DI+T H E+ ++ ++ IHA G K GV+I P TPV+
Sbjct: 64 DVHLMVTEPIRYVEDFAKAGADILTVHVEACENLVETVDKIHACGMKAGVSIKPNTPVSA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE V+D+ +M LIM+V PGFGGQ I ++ KI++ + L+ R I +EVDGG+ N+
Sbjct: 124 LEPVLDKTEMFLIMSVEPGFGGQAFIPESLDKIKELRNLLNARGIQADIEVDGGIYHSNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
K ++ AGA+++V GS+ F KG ++
Sbjct: 184 KEVLNAGANVIVAGSAVF--KGNVA 206
>gi|88812492|ref|ZP_01127741.1| Ribulose-phosphate 3-epimerase [Nitrococcus mobilis Nb-231]
gi|88790278|gb|EAR21396.1| Ribulose-phosphate 3-epimerase [Nitrococcus mobilis Nb-231]
Length = 224
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PSIL+A+F+RLG+E+ + AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 4 FKVAPSILSANFARLGDEVRRVLDAGADMVHFDVMDNHYVPNLTIGPVVCKALRDEGITA 63
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ + A AG ITFHPE+S H+ R+L+ I G + G+ NP TP+
Sbjct: 64 DIDVHLMVKPVDNIVPAFAKAGASWITFHPEASEHVDRTLQLIRDNGCRAGLVFNPATPL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
L V+D++DM+LIM+VNPGFGGQ I S + K+R+A++LI +R I LE+DGG+ +
Sbjct: 124 DYLRYVLDKVDMVLIMSVNPGFGGQAFIPSALDKLREARSLIDASQRPIRLEIDGGIKTD 183
Query: 182 NIKSLVQAGADLLVVGSSFF 201
NI++ +AGAD V GS+ F
Sbjct: 184 NIRAAAEAGADTFVAGSAIF 203
>gi|325686616|gb|EGD28642.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK72]
Length = 219
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|310817103|ref|YP_003965067.1| ribulose-phosphate 3-epimerase [Ketogulonicigenium vulgare Y25]
gi|308755838|gb|ADO43767.1| ribulose-phosphate 3-epimerase [Ketogulonicigenium vulgare Y25]
Length = 229
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 141/220 (64%), Gaps = 3/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+ADF+ G EI + GA +H DVMDG FVPNI+FGA + R + +
Sbjct: 6 SPKIAPSILSADFANFGAEIRAVEDQGADWVHVDVMDGHFVPNITFGAVAAAAFRPHIRT 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLM++ D I A AG D+IT HPES PHI R+L++I G K G+A+NP T +
Sbjct: 66 VMDVHLMVARPDDWIADFARAGADVITVHPESGPHIHRTLQSIRKAGAKAGLALNPGTGL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ ++D+ID+I +M+VNPGFGGQ I + +P+I +A+IG R I +EVDGGV N
Sbjct: 126 DGVQWLLDDIDLICVMSVNPGFGGQSFIPAALPRIAALRAMIGDRPIHIEVDGGVVPDNA 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLKKSA 220
+++ AGAD+LV GS+ F + Y + + L+ +A
Sbjct: 186 GAIIAAGADVLVAGSAVFKGGSTAAPEVYGRNIAALRAAA 225
>gi|217969353|ref|YP_002354587.1| ribulose-phosphate 3-epimerase [Thauera sp. MZ1T]
gi|217506680|gb|ACK53691.1| ribulose-phosphate 3-epimerase [Thauera sp. MZ1T]
Length = 231
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 136/202 (67%), Gaps = 6/202 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++R ++ +
Sbjct: 3 RIAPSLLSADFARLGEEVRDVIAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHTSAPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ++ITFHPE+S H+ R+L I G + G+ NP TP+
Sbjct: 63 DVHLMVKPVDRIVPDFAKAGANVITFHPEASEHVDRTLGLIRDAGCQAGLVFNPATPLDW 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGVT 179
++ V+D++D++L+M+VNPGFGGQ+ I T+ K+R A+A + R I LE+DGGV
Sbjct: 123 MDHVMDKLDVVLLMSVNPGFGGQKFIPETLNKLRAARARLDAYEARSGRRILLEIDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
+ NI ++ +AGAD V GS+ F
Sbjct: 183 TDNIAAIARAGADTFVAGSAVF 204
>gi|91785316|ref|YP_560522.1| ribulose-phosphate 3-epimerase [Burkholderia xenovorans LB400]
gi|296159461|ref|ZP_06842285.1| ribulose-phosphate 3-epimerase [Burkholderia sp. Ch1-1]
gi|91689270|gb|ABE32470.1| ribulose-5-phosphate 3-epimerase [Burkholderia xenovorans LB400]
gi|295890169|gb|EFG69963.1| ribulose-phosphate 3-epimerase [Burkholderia sp. Ch1-1]
Length = 227
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 129/206 (62%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R + D
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVDV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP T +
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATSL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEVDGG
Sbjct: 123 NYLDHVMDKVDLVLIMSVNPGFGGQSFIPEALNKLREARQRINAYTERTGREIHLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD V GS+ F Q
Sbjct: 183 VKVDNIAEIAAAGADTFVAGSAIFGQ 208
>gi|324989786|gb|EGC21729.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK353]
Length = 219
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFG V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGTGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELAVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|301301416|ref|ZP_07207554.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300850968|gb|EFK78714.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 215
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 142/215 (66%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ + AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADILNLGTDVQKVEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PHI R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHIHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R+++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K +AGA + V GS FN E ++A+R+N L+
Sbjct: 181 VKLCREAGATVAVAGSYVFNSGNE-THAERINKLR 214
>gi|58699121|ref|ZP_00373950.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630418|ref|YP_002727209.1| ribulose-phosphate 3-epimerase [Wolbachia sp. wRi]
gi|58534362|gb|EAL58532.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592399|gb|ACN95418.1| ribulose-phosphate 3-epimerase [Wolbachia sp. wRi]
Length = 226
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/228 (45%), Positives = 145/228 (63%), Gaps = 13/228 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF++LGEE+ I+ G IH DVMDG FVPNI+ G V+ ++R YS+
Sbjct: 2 SIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK--------KTGV 115
FD HLM++S +HI +AG DIIT H E+ H+ R +R I + + GV
Sbjct: 62 PFDVHLMVTSPGNHIESFINAGADIITVHAEAEIHLERLIRKIKSYKNVNDEKKPIQVGV 121
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLE 173
+I P T ++LE +I E+D++LIMTVNPGFGGQ+ I S + KI K +I +R++ +
Sbjct: 122 SIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQLNKISTIKKMIQERNLKTQIS 181
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
VDGG+ N +++AGAD+LV GS+ F K E K +NDLK L
Sbjct: 182 VDGGINFSNAADIIKAGADILVAGSAIF--KAE-DIKKAVNDLKNLLL 226
>gi|118603031|ref|YP_904246.1| ribulose-5-phosphate 3-epimerase [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567970|gb|ABL02775.1| ribulose-5-phosphate 3-epimerase [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 223
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSILAADF+RLGEE+ N+ + GA IHFDVMD +VPN++ G V +LR++ S
Sbjct: 7 IAPSILAADFTRLGEEVDNVLRDGADIIHFDVMDNHYVPNLTIGPLVCEALRNHGVSAPI 66
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ I AG ITFHPE+S HI R+L I K G+ NP TP+ I
Sbjct: 67 DVHLMVKPVNRIIPDFIKAGASYITFHPEASEHIDRTLSMIQEESCKAGLVFNPATPLHI 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE+V+D++DMIL+M+VNPGFGGQ I T+ K R+ + LI ++I LE+DGGV NI
Sbjct: 127 LENVMDKLDMILLMSVNPGFGGQSFIPHTLEKCRKVRKLIDASGKNIRLEIDGGVKIDNI 186
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD V GS+ F+ Y K ++ ++
Sbjct: 187 REVAKAGADTFVAGSAIFSTD---DYKKTIDAMR 217
>gi|313674603|ref|YP_004052599.1| ribulose-phosphate 3-epimerase [Marivirga tractuosa DSM 4126]
gi|312941301|gb|ADR20491.1| ribulose-phosphate 3-epimerase [Marivirga tractuosa DSM 4126]
Length = 218
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 136/212 (64%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L ++ + ++ A IH D+MDG FVPNISFG V ++ ++ D
Sbjct: 5 IAPSVLAADFANLQRDVEMLNESQADYIHVDIMDGIFVPNISFGLPVCEAIYKHAKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++I DAG I+ H E+SPH+ R+L+ I +G + GVAINP T V++L
Sbjct: 65 VHLMIEKPENYIQAFHDAGAATISVHYEASPHLHRTLQAIRDLGLRAGVAINPHTNVSLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+VI D++ +M+VNPGFGGQ+ IE T K+RQ K LI ++ S +E+DGGV N
Sbjct: 125 ENVIQNTDLVCMMSVNPGFGGQKFIEQTYAKVRQLKELIADQNASTLIEIDGGVNIDNAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L++AGAD+LV G+ F + I + L D+
Sbjct: 185 KLLEAGADVLVAGNFVFKSENPIHTIQELKDV 216
>gi|187925466|ref|YP_001897108.1| ribulose-phosphate 3-epimerase [Burkholderia phytofirmans PsJN]
gi|187716660|gb|ACD17884.1| Ribulose-phosphate 3-epimerase [Burkholderia phytofirmans PsJN]
Length = 238
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 131/206 (63%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R + D
Sbjct: 14 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVDV 73
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP T +
Sbjct: 74 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATSL 133
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+ L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I + R I LEVDGG
Sbjct: 134 SHLDYVMDKVDLVLIMSVNPGFGGQSFIPEALVKLREARKRINEYKERTGREIHLEVDGG 193
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD V GS+ F Q
Sbjct: 194 VKVDNIAEIAAAGADTFVAGSAIFGQ 219
>gi|32307592|gb|AAP79201.1| ribulose-5-phosphate 3-epimerase [Bigelowiella natans]
Length = 321
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 135/203 (66%), Gaps = 7/203 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F++LGE++ + GA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 96 IAPSILSANFAKLGEDVDRVLADGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPI 155
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I AG ITFHPE+S H+ RSL+ I G K G+ NP TP+ I
Sbjct: 156 DVHLMVSPVDRIIPDFIAAGASYITFHPEASLHVDRSLQMIKDAGLKCGLVFNPATPLDI 215
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGVT 179
LE VID++D++L+M+VNPGFGGQ+ I +T+ K ++A+ALI R I LE+DGGV+
Sbjct: 216 LEYVIDKVDIVLLMSVNPGFGGQKFIPNTLEKAKKARALIDAEMARSGRKIRLEIDGGVS 275
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
NIK + AG D+ V GS+ FN
Sbjct: 276 PANIKEVAAAGVDMFVAGSAIFN 298
>gi|293364730|ref|ZP_06611447.1| ribulose-phosphate 3-epimerase [Streptococcus oralis ATCC 35037]
gi|291316180|gb|EFE56616.1| ribulose-phosphate 3-epimerase [Streptococcus oralis ATCC 35037]
Length = 239
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ +S +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLSFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 237
>gi|269140598|ref|YP_003297299.1| ribulose-phosphate 3-epimerase [Edwardsiella tarda EIB202]
gi|267986259|gb|ACY86088.1| ribulose-phosphate 3-epimerase [Edwardsiella tarda EIB202]
gi|304560385|gb|ADM43049.1| Ribulose-phosphate 3-epimerase [Edwardsiella tarda FL6-60]
Length = 225
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 144/222 (64%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MNPYL-IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I ADAG IITFHPE+S H+ R+L+ I A G K G+ +NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFADAGASIITFHPEASEHVDRTLQLIRACGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP++ L+ V+D +D IL+M+VNPGFGGQ I ST+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLSCLDYVMDRLDTILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDASGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI ++ AGAD+ V GS+ F G YA + D+++
Sbjct: 180 VKVDNIGAIAAAGADMFVAGSAIF---GHADYAAVITDMRRE 218
>gi|83593737|ref|YP_427489.1| ribulose-5-phosphate 3-epimerase [Rhodospirillum rubrum ATCC 11170]
gi|83576651|gb|ABC23202.1| ribulose-5-phosphate 3-epimerase [Rhodospirillum rubrum ATCC 11170]
Length = 228
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 145/222 (65%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I+I PS+L+ADF+ LG + + GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MTRAIRIAPSLLSADFAFLGRDAQAMADGGADILHFDVMDNHYVPNLTVGPLVCAALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM +D I+ A+AG D+ITFHPE+S H+ RS++ I G K GVA+NP
Sbjct: 61 TSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGV 178
+P+++L+ +++++D++LIM+VNPGFGGQ I S +PKI + I +++EVDGGV
Sbjct: 121 SPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALRKRIDDAGLPVAIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N ++L AGAD+LV GS+ F G AK + ++ +A
Sbjct: 181 NPANARALGAAGADILVAGSAIF---GASDRAKAIASIRGAA 219
>gi|332532312|ref|ZP_08408192.1| ribulose-phosphate 3-epimerase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038179|gb|EGI74625.1| ribulose-phosphate 3-epimerase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 227
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF++LGE++ + +AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 10 IAPSILSADFAKLGEDVDKVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS I + A+AG IITFHPE+S H+ R+++ I G K G+ NP T ++
Sbjct: 70 DVHLMVKPVDSIIPLFAEAGASIITFHPEASEHVDRTIQLIKDHGCKAGLVFNPATSLSY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ VID++D IL+M+VNPGFGGQ I T+ K+RQAK I R I LEVDGG+ NI
Sbjct: 130 LDHVIDKLDTILLMSVNPGFGGQSFIPHTLEKLRQAKQRIIESGRDIRLEVDGGIKVDNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +AGAD+ V GS+ FNQ
Sbjct: 190 AAAARAGADMFVAGSAIFNQ 209
>gi|325697396|gb|EGD39282.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK160]
Length = 219
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K + INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSLVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +AGA++ V GS F KG++++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDVNH 208
>gi|315611878|ref|ZP_07886797.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis ATCC 49296]
gi|315316056|gb|EFU64089.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis ATCC 49296]
Length = 241
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 142/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 28 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 87
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV +
Sbjct: 88 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEV 147
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 148 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 207
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 208 SQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 239
>gi|313624958|gb|EFR94861.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL J1-023]
Length = 216
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 133/206 (64%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAK 211
AGADL+VVGS F E + K
Sbjct: 183 CTLAGADLIVVGSYLFEGNIEANLEK 208
>gi|239995404|ref|ZP_04715928.1| ribulose-phosphate 3-epimerase [Alteromonas macleodii ATCC 27126]
Length = 225
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 137/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE++ + +AGA +HFDVMD +VPN++FG + +LR+Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDVEKVLEAGADVVHFDVMDNHYVPNLTFGPMICEALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG I+FHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDDLIEKFANAGACYISFHPEASEHIDRSLQLIIDAGCKPGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGG 177
TP+ L+ V+D++ ILIM+VNPGFGGQ+ I ST+ K+R K L I +E+DGG
Sbjct: 120 ATPLHYLDHVMDKLHHILIMSVNPGFGGQKFIPSTLDKVRAVKQRVLESGYDIRIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI+ + +AGAD+ V GS+ F+Q
Sbjct: 180 VKVDNIREIAEAGADMFVAGSAIFSQ 205
>gi|238783120|ref|ZP_04627146.1| Ribulose-phosphate 3-epimerase [Yersinia bercovieri ATCC 43970]
gi|238715916|gb|EEQ07902.1| Ribulose-phosphate 3-epimerase [Yersinia bercovieri ATCC 43970]
Length = 225
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + AGAD+ V GS+ F+Q YA + D +S LA+
Sbjct: 186 RQIAAAGADMFVAGSAIFSQP---DYAAVI-DAMRSELAM 221
>gi|326800483|ref|YP_004318302.1| ribulose-phosphate 3-epimerase [Sphingobacterium sp. 21]
gi|326551247|gb|ADZ79632.1| ribulose-phosphate 3-epimerase [Sphingobacterium sp. 21]
Length = 223
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 148/219 (67%), Gaps = 2/219 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L +I + K+ A IH D+MDG FVPNISFG V+++++ ++ D
Sbjct: 5 VAPSILSADFANLQRDIEMLNKSDADWIHVDIMDGVFVPNISFGFPVVKAVKQHALKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++N +AG + I+ H E+ H+ R+++ I +G + GVAINP TP+A L
Sbjct: 65 VHLMIVDPDRYLNEFKEAGANNISVHFEACIHLHRTIQKIKELGCRAGVAINPHTPIAQL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
D++++ID++ +M+VNPGFGGQ+ IEST +IR+ + L R+ +L E+DGGV +N
Sbjct: 125 SDIVEDIDLVCMMSVNPGFGGQKFIESTYRRIRELRLLAQDRNPNLLIEIDGGVNHQNSL 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
SL+QAGA++LV G++ F +++ K+L D+ + A+
Sbjct: 185 SLLQAGANVLVAGNTVFGADDQMASIKQLKDVSITRKAV 223
>gi|298503753|ref|YP_003725693.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
TCH8431/19A]
gi|298239348|gb|ADI70479.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
TCH8431/19A]
Length = 239
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRQEKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 237
>gi|308234457|ref|ZP_07665194.1| ribulose-5-phosphate 3-epimerase [Atopobium vaginae DSM 15829]
gi|328944304|ref|ZP_08241768.1| ribulose-phosphate 3-epimerase [Atopobium vaginae DSM 15829]
gi|327491223|gb|EGF22998.1| ribulose-phosphate 3-epimerase [Atopobium vaginae DSM 15829]
Length = 228
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 140/204 (68%), Gaps = 4/204 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I I PS+L+A+F +L +E+S+I A A +HFDVMDG FVPN+SFG ++R++++ S
Sbjct: 3 THPICIAPSMLSANFMKLSDELSSI--ATADYLHFDVMDGHFVPNLSFGCPILRAVKASS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLM+ + ++ + DAG D T H E+ H++R + TIH+ K+ VA+NP T
Sbjct: 61 DLPVDVHLMVDNPETTLEWYLDAGADSFTIHMEAQTHLKRLIDTIHSAHKRACVALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
V L+DVI+++DM+L+M+VNPGFGGQ IEST KI + KAL + ++ +EVDGG+
Sbjct: 121 AVMNLDDVIEDVDMVLVMSVNPGFGGQSFIESTCKKIAKVKALCDEHGVNPVIEVDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
+ N + +AGA +LV GSS FN+
Sbjct: 181 AHNAYDVARAGATMLVAGSSVFNE 204
>gi|313893384|ref|ZP_07826956.1| ribulose-phosphate 3-epimerase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442025|gb|EFR60445.1| ribulose-phosphate 3-epimerase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 216
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EE+ +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFATLSEELQSIESAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEYAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I++ I K++QAK L + + +EVDGG+
Sbjct: 122 VLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNTTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFF 201
+ +AGA +LV GS+ F
Sbjct: 182 TCVPIKRAGATVLVAGSAVF 201
>gi|114561569|ref|YP_749082.1| ribulose-phosphate 3-epimerase [Shewanella frigidimarina NCIMB 400]
gi|114332862|gb|ABI70244.1| ribulose-5-phosphate 3-epimerase [Shewanella frigidimarina NCIMB
400]
Length = 223
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLG+++ + AG+ +HFDVMD +VPN++ G V +LR+Y +
Sbjct: 6 IAPSILSADFARLGDDVKAVLDAGSDVVHFDVMDNHYVPNLTIGPMVCTALRNYGITADI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG IITFHPE+S HI R+L+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNPGTPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ +A+I I L+VDGGV NI
Sbjct: 126 LDHVMDKLDVILLMSVNPGFGGQSFIPHTLEKLRQVRAIIDASGFDIRLQVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ FNQ
Sbjct: 186 AEIAAAGADMFVAGSAIFNQ 205
>gi|46906750|ref|YP_013139.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47093129|ref|ZP_00230905.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|217965409|ref|YP_002351087.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|226223130|ref|YP_002757237.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes Clip81459]
gi|254824221|ref|ZP_05229222.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|254853874|ref|ZP_05243222.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|254933259|ref|ZP_05266618.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|254992419|ref|ZP_05274609.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J2-064]
gi|290894376|ref|ZP_06557340.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|300765156|ref|ZP_07075142.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|46880015|gb|AAT03316.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47018502|gb|EAL09259.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|217334679|gb|ACK40473.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|225875592|emb|CAS04295.1| Putative ribulose-5-phosphate 3-epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258607259|gb|EEW19867.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|290556083|gb|EFD89633.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|293584819|gb|EFF96851.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|293593454|gb|EFG01215.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|300514127|gb|EFK41188.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|307570035|emb|CAR83214.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes L99]
gi|328467574|gb|EGF38636.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 1816]
gi|332310927|gb|EGJ24022.1| Ribulose-phosphate 3-epimerase [Listeria monocytogenes str. Scott
A]
Length = 216
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 138/217 (63%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F +G+I L L K L
Sbjct: 183 CTLAGADLIVVGSYLF--EGDIE--ANLEKLSKGVLT 215
>gi|320547546|ref|ZP_08041832.1| ribulose-phosphate 3-epimerase [Streptococcus equinus ATCC 9812]
gi|320447891|gb|EFW88648.1| ribulose-phosphate 3-epimerase [Streptococcus equinus ATCC 9812]
Length = 220
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 130/198 (65%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNI+FGADV+ S+R +S +F
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNITFGADVVASMRKHSKLIF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + ++ A AG DI+T H ES+ H+ +L+ I G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERFVDAFAQAGADIMTIHAESTLHVHGALQKIKKAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I + K+ + + ++ +EVDGGV ++ I
Sbjct: 125 IEPVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVEKVAKIRDEKGYDFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ QAGA++ V GS F
Sbjct: 185 KACYQAGANVFVAGSYLF 202
>gi|330993137|ref|ZP_08317075.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter sp. SXCC-1]
gi|329759907|gb|EGG76413.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter sp. SXCC-1]
Length = 225
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 135/218 (61%), Gaps = 9/218 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADFSR +E++ + + GA +H DVMDG FVPN+S G ++++LR S FD
Sbjct: 9 IAPSLLAADFSRAADEVAAVERGGADWLHLDVMDGHFVPNLSMGPQLVQALRPKSKLAFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D +I A AG D I H E+ PH RSL+ + G K G+AI P TP +
Sbjct: 69 VHLMIAPVDPYIEAFAKAGADHIHLHVEAGPHTHRSLQHVRDHGVKPGIAICPATPPEAV 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKI----RQAKALIGKRSISLEVDGGVTSRN 182
+V+D +DMIL+MTVNPGFGGQ+ + S + KI R A A R I + VDGG+T+
Sbjct: 129 GEVLDLVDMILVMTVNPGFGGQKFLTSQLRKITTLRRMADAT--GRDIRIGVDGGITAHT 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V AGAD+L+ G+S + Q YA + DL+ A
Sbjct: 187 APLAVAAGADVLIAGTSVYGQD---DYAAAIRDLRSGA 221
>gi|319428296|gb|ADV56370.1| ribulose-phosphate 3-epimerase [Shewanella putrefaciens 200]
Length = 224
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y +++++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKAVVDEMR 216
>gi|182684917|ref|YP_001836664.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae CGSP14]
gi|182630251|gb|ACB91199.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae CGSP14]
Length = 239
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 237
>gi|307702976|ref|ZP_07639923.1| ribulose-phosphate 3-epimerase [Streptococcus oralis ATCC 35037]
gi|307623369|gb|EFO02359.1| ribulose-phosphate 3-epimerase [Streptococcus oralis ATCC 35037]
Length = 218
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ +S +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLSFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|291458610|ref|ZP_06598000.1| ribulose-phosphate 3-epimerase [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419143|gb|EFE92862.1| ribulose-phosphate 3-epimerase [Oribacterium sp. oral taxon 078
str. F0262]
Length = 231
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 138/207 (66%), Gaps = 5/207 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADFS L EE+S +AG + +HFDVMDG FVPNISFGA +IRSLR S S FD
Sbjct: 12 LAPSLLAADFSELWEELSKAERAGVRFVHFDVMDGSFVPNISFGAPIIRSLRKRSQSFFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP---V 123
H+M+ ++ + +AG D +T H E++ H+ RSL I +G + G+A+NP TP V
Sbjct: 72 VHMMVEEPIRYLEDMKNAGADRVTIHSEAARHLDRSLNRIRELGMQAGLALNPATPLSSV 131
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+ + +D++LIM+VNPGFGGQ+LI T+ KIR+ A+ + + + +DGGVT
Sbjct: 132 LLSGGLDSLLDLVLIMSVNPGFGGQKLIPYTLDKIRELAAIRRESGGAYQIGIDGGVTME 191
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEIS 208
N+ S++ AGAD LVVGSS F K IS
Sbjct: 192 NLPSILDAGADFLVVGSSIFRPKERIS 218
>gi|282850145|ref|ZP_06259524.1| ribulose-phosphate 3-epimerase [Veillonella parvula ATCC 17745]
gi|294791797|ref|ZP_06756945.1| ribulose-phosphate 3-epimerase [Veillonella sp. 6_1_27]
gi|282579638|gb|EFB85042.1| ribulose-phosphate 3-epimerase [Veillonella parvula ATCC 17745]
gi|294457027|gb|EFG25389.1| ribulose-phosphate 3-epimerase [Veillonella sp. 6_1_27]
Length = 216
Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 138/207 (66%), Gaps = 3/207 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EE+ +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFAVLSEELKSIEAAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I++ I K++QAK L + + +EVDGG+
Sbjct: 122 LLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNSTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ +AGA +LV GS+ F + S
Sbjct: 182 TCVPIKRAGATVLVAGSAVFGAENRAS 208
>gi|307731096|ref|YP_003908320.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1003]
gi|307585631|gb|ADN59029.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1003]
Length = 227
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 137/225 (60%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R + D
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVDV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP T +
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATSL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEVDGG
Sbjct: 123 NYLDHVMDKLDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYKERTGREIHLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD V GS+ F Q K + D ++ALA
Sbjct: 183 VKVDNIAEIAAAGADTFVAGSAIFGQPDH----KVVIDKMRAALA 223
>gi|163751647|ref|ZP_02158867.1| ribulose-phosphate 3-epimerase [Shewanella benthica KT99]
gi|161328473|gb|EDP99628.1| ribulose-phosphate 3-epimerase [Shewanella benthica KT99]
Length = 224
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 136/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+A+F+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSANFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GVTAEIDVHLMVKPVDRMIVDFAKAGASIITFHPEATDHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
+P+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ K LI I L+VDGG
Sbjct: 120 GSPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPATLDKLRQVKQLIDASGFDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ FN+
Sbjct: 180 VKVDNIAEIATAGADMFVAGSAIFNK 205
>gi|190571232|ref|YP_001975590.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018631|ref|ZP_03334439.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357504|emb|CAQ54940.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995582|gb|EEB56222.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 224
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 142/225 (63%), Gaps = 11/225 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LGEE+ I+ IH DVMDG FVPNI+ G +VI ++R YS+
Sbjct: 3 IKIAPSILSADFAKLGEEVKRISDLNVDYIHIDVMDGNFVPNITIGPNVIYAIRKYSNLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------GVAIN 118
FD HLMI S HI +AG DIIT H E+ H+ R +R I + T G +I
Sbjct: 63 FDVHLMIKSPGDHIESFINAGADIITIHAEAEIHLERLVRKIKSYKNNTKKIIQVGASIV 122
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDG 176
P T ++LE +IDE+D++LIMTVNPGFGGQ+ I S + KI + +I R++ + VDG
Sbjct: 123 PSTSPSVLEYIIDELDIVLIMTVNPGFGGQEFIHSQLSKISTVRKMIQDRNLKTQVSVDG 182
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
GV N +++AGA++LV GS+ F K E K +NDLK +L
Sbjct: 183 GVNFSNAADIIKAGANILVAGSAIF--KAE-DMKKAVNDLKNLSL 224
>gi|90415250|ref|ZP_01223184.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2207]
gi|90332573|gb|EAS47743.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2207]
Length = 222
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 134/198 (67%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+A+F+RLGEE+ + +AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILSANFARLGEEVDAVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I + ADAG ITFHPE+S H+ RSL+ + +G K G+ +NP T +
Sbjct: 66 DVHLMVQPVDDLIRMFADAGATYITFHPEASNHVDRSLQLVRDLGCKAGLVLNPATSLET 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ V+D +DM+L+M+VNPGFGGQ+ I +T+ K+ +A+ LI I LE+DGGVT NI
Sbjct: 126 VRWVMDRMDMLLLMSVNPGFGGQKFIPATLDKLAEARKLIDSSGHDIRLEIDGGVTVNNI 185
Query: 184 KSLVQAGADLLVVGSSFF 201
+ + AGAD V GS+ +
Sbjct: 186 REIAAAGADTFVAGSAIY 203
>gi|194014352|ref|ZP_03052969.1| ribulose-phosphate 3-epimerase [Bacillus pumilus ATCC 7061]
gi|194013378|gb|EDW22943.1| ribulose-phosphate 3-epimerase [Bacillus pumilus ATCC 7061]
Length = 216
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 138/203 (67%), Gaps = 3/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ L ++I ++ + GA IH DVMDG FVPN++FG +V+ ++R ++
Sbjct: 2 VYIAPSILSADFANLEKDIRDVEQGGADYIHIDVMDGHFVPNMTFGPNVVEAIRPHTRLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DII+ H E+ PH+ R+++ + G K GV +NP TPV+
Sbjct: 62 LDVHLMIEQPDRYIPAFAKAGADIISVHVEACPHLHRTIQHMKEQGVKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+E +++++D++L MTVNPGFGGQ I S + K+++ KAL ++ ++ +E+DGGV
Sbjct: 122 HIEHILEDVDLVLFMTVNPGFGGQAFIPSVLTKVKEVKALSEQKGLTDLLIEIDGGVNVE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
KS +AGA+LLV GS+ + ++
Sbjct: 182 TAKSCKEAGANLLVAGSAVYGKE 204
>gi|146313431|ref|YP_001178505.1| ribulose-phosphate 3-epimerase [Enterobacter sp. 638]
gi|145320307|gb|ABP62454.1| ribulose-5-phosphate 3-epimerase [Enterobacter sp. 638]
Length = 225
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ +N AGA +HFDVMD +VPN++ G V+++LR+Y +
Sbjct: 6 IAPSILSADFARLGEDTANALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|323527454|ref|YP_004229607.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1001]
gi|323384456|gb|ADX56547.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1001]
Length = 242
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 129/206 (62%), Gaps = 6/206 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R + D
Sbjct: 14 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVDV 73
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP T +
Sbjct: 74 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATSL 133
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEVDGG
Sbjct: 134 NYLDHVMDKLDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYKARTGREIHLEVDGG 193
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD V GS+ F Q
Sbjct: 194 VKVDNIAEIAAAGADTFVAGSAIFGQ 219
>gi|148242355|ref|YP_001227512.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RCC307]
gi|147850665|emb|CAK28159.1| Ribulose-phosphate 3-epimerase [Synechococcus sp. RCC307]
Length = 248
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 141/218 (64%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADFS+LGE++ + +AGA IH DVMDG FVPNI+ G ++++LR +
Sbjct: 26 SLVISPSILSADFSKLGEDVRAVDQAGADWIHVDVMDGRFVPNITIGPMIVKALRPVTSK 85
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP TP+
Sbjct: 86 PLDVHLMIVEPEKYVEDFAKAGADIISVQVEACPHLHRNLAQIKDLGKKAGAVLNPGTPI 145
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
LE ++ D++L+M+VNPGFGGQ IE+ + KIR + + +R + +EVDGG+ +
Sbjct: 146 DTLEYCLELCDLVLVMSVNPGFGGQSFIENQVDKIRDLRRMCDERGLDPWIEVDGGIKAG 205
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ SYA+ + ++ S
Sbjct: 206 NAWKVIEAGANAIVSGSGVFNQP---SYAEAIEGIRNS 240
>gi|225861800|ref|YP_002743309.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230179|ref|ZP_06963860.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|225728041|gb|ACO23892.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|327389147|gb|EGE87493.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA04375]
Length = 218
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRQEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 216
>gi|296875729|ref|ZP_06899794.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis ATCC
15912]
gi|296433299|gb|EFH19081.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis ATCC
15912]
Length = 219
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 134/201 (66%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++++ PSIL+AD++ E+ + AGA H DVMDG FVPNISFGA V+ S+R +S
Sbjct: 3 TMKLAPSILSADYANFESELKRLEAAGADYAHIDVMDGHFVPNISFGAGVVESMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+++ + HI A AG DII+ H E++PHI +L+ I G K V INP TPV
Sbjct: 63 VFDCHLMVTNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRQAGVKASVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ V++ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ +
Sbjct: 123 DSIKHVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELAALREEKGLDFDIEVDGGIDDQ 182
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
+I +AGA++ V GS FN
Sbjct: 183 SISQAKEAGANVFVAGSYVFN 203
>gi|312865675|ref|ZP_07725899.1| ribulose-phosphate 3-epimerase [Streptococcus downei F0415]
gi|311098796|gb|EFQ57016.1| ribulose-phosphate 3-epimerase [Streptococcus downei F0415]
Length = 219
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ +E+ I + A +H D+MDG FVPNISFGADV+ SLR +S VF
Sbjct: 4 KIAPSILAADYANFAQELKRIDETSADYVHIDIMDGQFVPNISFGADVVASLRKHSKLVF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +++ A AG DI+T H E+ HI +L+ I G K GV INP TPV+
Sbjct: 64 DCHLMVVEPERYVDAFAQAGADIMTIHVEAIQHIHGALQKIKKAGLKAGVVINPGTPVSA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE +++ +D +LIMTVNPGFGGQ I + K+++ + + +EVDGGV + I
Sbjct: 124 LEPILNLVDQVLIMTVNPGFGGQAFIPEMLEKVKKVATWREEAGYNFDIEVDGGVDDKTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K+ AGA++ V GS F S + L D
Sbjct: 184 KACKDAGANVFVAGSYLFKADDLASQVQTLRD 215
>gi|24378849|ref|NP_720804.1| ribulose-phosphate 3-epimerase [Streptococcus mutans UA159]
gi|24376726|gb|AAN58110.1|AE014882_13 putative ribulose-phosphate-3-epimerase [Streptococcus mutans
UA159]
Length = 219
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 130/200 (65%), Gaps = 2/200 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSILAAD++ E+ I + G K +H D+MDG FVP+ISFGA V+ S+R +S VF
Sbjct: 5 QIAPSILAADYANFESELKRIEETGVKYVHIDIMDGQFVPSISFGAGVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ + AG DI+T H E++ HI +L+ I G K G+ INP TPVA
Sbjct: 65 DCHLMVVNPERYVDDFSQAGADIMTVHVEATHHIHGALQKIKDAGMKAGIVINPGTPVAD 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE V+ D ILIMTVNPGFGGQ I + K+R L ++ +S +EVDGG+ + I
Sbjct: 125 LESVLSLADQILIMTVNPGFGGQAFIPEMLEKVRTVAKLREEKGLSFDIEVDGGIDNETI 184
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K QAGA++ V GS F +
Sbjct: 185 KLAKQAGANIFVAGSYLFKE 204
>gi|283787979|ref|YP_003367844.1| ribulose-phosphate 3-epimerase [Citrobacter rodentium ICC168]
gi|282951433|emb|CBG91132.1| ribulose-phosphate 3-epimerase [Citrobacter rodentium ICC168]
Length = 225
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRKYGIAAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G + G+ NP TP++
Sbjct: 66 DVHLMVEPVDRIVPDFAAAGASIITFHPEASGHVDRTLQLIKEHGCQAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLNKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|15903839|ref|NP_359389.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae R6]
gi|116515540|ref|YP_817202.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae D39]
gi|148985563|ref|ZP_01818752.1| purine operon repressor [Streptococcus pneumoniae SP3-BS71]
gi|148989983|ref|ZP_01821258.1| purine operon repressor [Streptococcus pneumoniae SP6-BS73]
gi|148998513|ref|ZP_01825954.1| purine operon repressor [Streptococcus pneumoniae SP11-BS70]
gi|149003643|ref|ZP_01828508.1| purine operon repressor [Streptococcus pneumoniae SP14-BS69]
gi|149007458|ref|ZP_01831101.1| purine operon repressor [Streptococcus pneumoniae SP18-BS74]
gi|149021933|ref|ZP_01835920.1| purine operon repressor [Streptococcus pneumoniae SP23-BS72]
gi|168484282|ref|ZP_02709234.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1873-00]
gi|168489988|ref|ZP_02714187.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP195]
gi|168576617|ref|ZP_02722483.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae MLV-016]
gi|225859738|ref|YP_002741248.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae 70585]
gi|237651000|ref|ZP_04525252.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae CCRI 1974]
gi|237822558|ref|ZP_04598403.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae CCRI
1974M2]
gi|303254094|ref|ZP_07340209.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS455]
gi|303260356|ref|ZP_07346326.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP-BS293]
gi|303262504|ref|ZP_07348446.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
SP14-BS292]
gi|303265135|ref|ZP_07351048.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS397]
gi|303266003|ref|ZP_07351898.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS457]
gi|303268065|ref|ZP_07353866.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS458]
gi|307068591|ref|YP_003877557.1| pentose-5-phosphate-3-epimerase [Streptococcus pneumoniae AP200]
gi|15459482|gb|AAL00600.1| Pentose-5-phosphate-3-epimerase [Streptococcus pneumoniae R6]
gi|116076116|gb|ABJ53836.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae D39]
gi|147755706|gb|EDK62752.1| purine operon repressor [Streptococcus pneumoniae SP11-BS70]
gi|147758375|gb|EDK65375.1| purine operon repressor [Streptococcus pneumoniae SP14-BS69]
gi|147761030|gb|EDK67999.1| purine operon repressor [Streptococcus pneumoniae SP18-BS74]
gi|147922283|gb|EDK73404.1| purine operon repressor [Streptococcus pneumoniae SP3-BS71]
gi|147924643|gb|EDK75729.1| purine operon repressor [Streptococcus pneumoniae SP6-BS73]
gi|147929971|gb|EDK80959.1| purine operon repressor [Streptococcus pneumoniae SP23-BS72]
gi|172042513|gb|EDT50559.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1873-00]
gi|183571610|gb|EDT92138.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP195]
gi|183577613|gb|EDT98141.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae MLV-016]
gi|225721860|gb|ACO17714.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae 70585]
gi|301800744|emb|CBW33392.1| putative ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
OXC141]
gi|301802660|emb|CBW35426.1| putative ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
INV200]
gi|302598927|gb|EFL65958.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS455]
gi|302636404|gb|EFL66897.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
SP14-BS292]
gi|302638522|gb|EFL68987.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP-BS293]
gi|302642425|gb|EFL72771.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS458]
gi|302644444|gb|EFL74696.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS457]
gi|302645352|gb|EFL75586.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS397]
gi|306410128|gb|ADM85555.1| Pentose-5-phosphate-3-epimerase [Streptococcus pneumoniae AP200]
gi|332071960|gb|EGI82448.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA17545]
gi|332072064|gb|EGI82551.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA17570]
gi|332199297|gb|EGJ13375.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA41317]
gi|332199408|gb|EGJ13485.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA47368]
Length = 218
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 216
>gi|225618952|ref|YP_002720178.1| ribulose-phosphate 3-epimerase [Brachyspira hyodysenteriae WA1]
gi|225213771|gb|ACN82505.1| ribulose-phosphate 3-epimerase [Brachyspira hyodysenteriae WA1]
Length = 233
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 136/217 (62%), Gaps = 3/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I SIL A FS L I + +AG+ +H DVMDG FVP I+FGA VI ++ S
Sbjct: 20 INIATSILTASFSNLEATIKELEEAGSDYLHLDVMDGVFVPQITFGAKVISDIKKISSIP 79
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + HI+ A AGCDI++ H E + HI R + I A K G+ +NP T V
Sbjct: 80 LDAHLMIVNPEKHIDDFAKAGCDIVSVHFEGNIHIHRLIYQIKAHNIKAGIVLNPHTRVD 139
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E +ID+ID +L+M+VNPGFGGQ+ IES++ KI++AK LIG R I L VDGGV
Sbjct: 140 VIEPIIDDIDYLLLMSVNPGFGGQKFIESSVSKIKEAKKLIGNRDIILAVDGGVNLNTCN 199
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
S+V+AGA+ LV GS+ + + +N L+ S L
Sbjct: 200 SVVEAGANFLVAGSAIIDSNNK---KDTINKLRCSKL 233
>gi|16766771|ref|NP_462386.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62181985|ref|YP_218402.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161616519|ref|YP_001590484.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167994588|ref|ZP_02575679.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168465253|ref|ZP_02699145.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194443940|ref|YP_002042733.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|198245033|ref|YP_002217444.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205354893|ref|YP_002228694.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858723|ref|YP_002245374.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224585277|ref|YP_002639076.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|16422041|gb|AAL22345.1| D-ribulose-5-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62129618|gb|AAX67321.1| D-ribulose-5-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161365883|gb|ABX69651.1| hypothetical protein SPAB_04334 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402603|gb|ACF62825.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195632218|gb|EDX50702.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197939549|gb|ACH76882.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205274674|emb|CAR39728.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205327586|gb|EDZ14350.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|206710526|emb|CAR34884.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469805|gb|ACN47635.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248638|emb|CBG26476.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995700|gb|ACY90585.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160026|emb|CBW19545.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914507|dbj|BAJ38481.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321226532|gb|EFX51582.1| Ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322716473|gb|EFZ08044.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323131842|gb|ADX19272.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326625225|gb|EGE31570.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630039|gb|EGE36382.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332990335|gb|AEF09318.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 225
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F++ Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDKP---DYKKVIDEMR 216
>gi|120600627|ref|YP_965201.1| ribulose-phosphate 3-epimerase [Shewanella sp. W3-18-1]
gi|146294783|ref|YP_001185207.1| ribulose-phosphate 3-epimerase [Shewanella putrefaciens CN-32]
gi|120560720|gb|ABM26647.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. W3-18-1]
gi|145566473|gb|ABP77408.1| ribulose-5-phosphate 3-epimerase [Shewanella putrefaciens CN-32]
Length = 236
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 13 MRPFL-IAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 71
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 72 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKESGCKAGLVFNP 131
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I I LEVDGG
Sbjct: 132 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGG 191
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y +++++
Sbjct: 192 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKAVVDEMR 228
>gi|168235073|ref|ZP_02660131.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194735372|ref|YP_002116426.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|200386859|ref|ZP_03213471.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|194710874|gb|ACF90095.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291568|gb|EDY30920.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199603957|gb|EDZ02502.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|322614143|gb|EFY11079.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618034|gb|EFY14927.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625351|gb|EFY22177.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629816|gb|EFY26589.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632295|gb|EFY29046.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636354|gb|EFY33061.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322643210|gb|EFY39779.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644565|gb|EFY41102.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651187|gb|EFY47571.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654945|gb|EFY51260.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659202|gb|EFY55454.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663097|gb|EFY59301.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668583|gb|EFY64736.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674613|gb|EFY70706.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678181|gb|EFY74242.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682562|gb|EFY78583.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684275|gb|EFY80281.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192170|gb|EFZ77402.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196404|gb|EFZ81556.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201795|gb|EFZ86858.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206337|gb|EFZ91298.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211931|gb|EFZ96758.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216836|gb|EGA01559.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222235|gb|EGA06618.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227370|gb|EGA11536.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228178|gb|EGA12309.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233555|gb|EGA17648.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323236983|gb|EGA21050.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243802|gb|EGA27818.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323245955|gb|EGA29942.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250732|gb|EGA34610.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323255743|gb|EGA39493.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261399|gb|EGA44985.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267628|gb|EGA51110.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268509|gb|EGA51976.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 225
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F++ Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDKP---DYKKVIDEMR 216
>gi|149921432|ref|ZP_01909885.1| ribulose-phosphate 3-epimerase [Plesiocystis pacifica SIR-1]
gi|149817752|gb|EDM77217.1| ribulose-phosphate 3-epimerase [Plesiocystis pacifica SIR-1]
Length = 230
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 134/206 (65%), Gaps = 8/206 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLG+E+ I + GA IH DVMDG FVPN++ G V+++LR + D
Sbjct: 4 IAPSILSADFARLGDEVRAIDEGGADWIHVDVMDGRFVPNLTIGPMVVKALRPVTAKFMD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK------KTGVAINPE 120
CHLMI + ++ A AG D IT H E+ PH+ R+L+ IHA+ + GV++NP
Sbjct: 64 CHLMIVEPEKYVAEFASAGADGITVHAEACPHLHRNLQQIHALPHHGGERVRAGVSLNPH 123
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV ++ V++ D++LIM+VNPGFGGQ+ I++ PKIR + I R +S ++VDGGV
Sbjct: 124 TPVDVVMHVLELCDLVLIMSVNPGFGGQKFIDAVRPKIRTLREAITARGLSTRIQVDGGV 183
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
T NI L GAD+ V GS+ F K
Sbjct: 184 TQDNIGELAGDGADVFVAGSAVFRSK 209
>gi|167746126|ref|ZP_02418253.1| hypothetical protein ANACAC_00822 [Anaerostipes caccae DSM 14662]
gi|317473316|ref|ZP_07932611.1| ribulose-phosphate 3-epimerase [Anaerostipes sp. 3_2_56FAA]
gi|167654641|gb|EDR98770.1| hypothetical protein ANACAC_00822 [Anaerostipes caccae DSM 14662]
gi|316899152|gb|EFV21171.1| ribulose-phosphate 3-epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 218
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 131/196 (66%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADF LG++I AGA+ +H DVMDG FVPNISFG VI+S+RS +D VFD H
Sbjct: 7 PSILSADFKTLGDDIKKADAAGAQWVHIDVMDGDFVPNISFGMPVIKSIRSATDKVFDVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+ I+ A G D IT H E+ H+ R ++ I G K GV++NP T +++L+
Sbjct: 67 LMVEEPGRFIDEFAACGADYITVHAEACTHLGRVIQQIKQKGCKVGVSLNPATSLSVLDY 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSL 186
V+D++DM+LIM+VNPGFGGQ IE+ KIR + +I R + ++VDGGVT+ NI +
Sbjct: 127 VLDDLDMVLIMSVNPGFGGQSYIEAMDQKIRDLRKMITDRGLDVDIQVDGGVTADNIAHI 186
Query: 187 VQAGADLLVVGSSFFN 202
GA++ V GS+ FN
Sbjct: 187 KDCGANVFVAGSAVFN 202
>gi|296137537|ref|YP_003644779.1| ribulose-phosphate 3-epimerase [Thiomonas intermedia K12]
gi|295797659|gb|ADG32449.1| ribulose-phosphate 3-epimerase [Thiomonas intermedia K12]
Length = 235
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 135/212 (63%), Gaps = 12/212 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V +++ Y
Sbjct: 6 TYRIAPSILSADFARLGEEVRNVIDAGADFIHFDVMDNHYVPNLTIGPLVAEAIKPYCKK 65
Query: 64 ------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D HLM+ +D+ AG DI++FHPE+S H+ R+L+ I G K G+
Sbjct: 66 ADGTPITLDVHLMVEPVDAIAQSFVKAGADIVSFHPEASKHVDRTLQMIRDGGAKAGLVF 125
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSIS 171
NP TP+++L+ V+D++D++L+M+VNPGFGGQ IES++PK +Q +A + R I
Sbjct: 126 NPATPLSVLDYVMDKVDLVLLMSVNPGFGGQSFIESSLPKAKQVRAKLDAYKAQTGRDIL 185
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
LE+DGG+ NI + AG D V GS+ F +
Sbjct: 186 LEIDGGIKPDNIAAAAAAGVDTFVAGSAIFGK 217
>gi|118594307|ref|ZP_01551654.1| Ribulose-phosphate 3-epimerase [Methylophilales bacterium HTCC2181]
gi|118440085|gb|EAV46712.1| Ribulose-phosphate 3-epimerase [Methylophilales bacterium HTCC2181]
Length = 232
Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 134/207 (64%), Gaps = 6/207 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL+A+F++LG+EI ++ +G +HFDVMD +VPN++ G V ++R
Sbjct: 1 MEKNYRIAPSILSANFAKLGQEIQDVIASGTDFVHFDVMDNHYVPNLTIGPLVCEAIRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+++ D HLM+ +D I A AG DIITFHPE S HI RSL + G K+G+ NP
Sbjct: 61 TEATIDVHLMVKPVDRIIPDFAKAGADIITFHPEGSEHIDRSLSLVRDNGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T + L+ V+D+IDMIL+M+VNPGFGGQ+ I T+ K+ QA+ I R I LEV
Sbjct: 121 TSLDYLDHVMDKIDMILLMSVNPGFGGQKFIPETLNKLVQARKRIDAYAEKTGRQILLEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFF 201
DGGV NI+ + +AGAD V GS+ F
Sbjct: 181 DGGVNPNNIEEIARAGADTFVAGSAIF 207
>gi|332285784|ref|YP_004417695.1| ribulose-phosphate 3-epimerase [Pusillimonas sp. T7-7]
gi|330429737|gb|AEC21071.1| ribulose-phosphate 3-epimerase [Pusillimonas sp. T7-7]
Length = 233
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 136/204 (66%), Gaps = 6/204 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LAADF++LG+E+ ++ AGA IHFDVMD +VPN++ G V ++R ++D+
Sbjct: 8 RIAPSLLAADFAKLGDEVKSVVAAGADWIHFDVMDNHYVPNLTIGPMVCEAIRPHTDAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG +IITFHPE+S H RSL I +G K G+ NP T +
Sbjct: 68 DVHLMVEPVDAIIPQFAKAGANIITFHPEASKHPDRSLSLIRDLGCKAGLVFNPATSLNW 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGVT 179
++ V+D++D++L+M+VNPGFGGQ I T+ K+ A+ I G + I+LE+DGGV
Sbjct: 128 MDHVMDKLDVVLLMSVNPGFGGQSFIPGTLAKLALARQKIDRWQNQGGQPIALEIDGGVK 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
NI ++ AGAD V GS+ F+Q
Sbjct: 188 VDNIAAIRAAGADTFVAGSAIFSQ 211
>gi|307710850|ref|ZP_07647277.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK321]
gi|307617295|gb|EFN96468.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK321]
Length = 218
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHAEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|113972019|ref|YP_735812.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. MR-4]
gi|113886703|gb|ABI40755.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. MR-4]
Length = 225
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 135/207 (65%), Gaps = 4/207 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK 204
V NI + AGAD+ V GS+ F ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKR 206
>gi|290473144|ref|YP_003466005.1| D-ribulose-5-phosphate 3-epimerase [Xenorhabdus bovienii SS-2004]
gi|289172438|emb|CBJ79205.1| D-ribulose-5-phosphate 3-epimerase [Xenorhabdus bovienii SS-2004]
Length = 224
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 134/206 (65%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++L Y
Sbjct: 1 MKKDFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALCDY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 GITAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGF GQ I T+ K+RQ + +I + I LEVDGG
Sbjct: 121 ATPLSYLDYVLDKLDVILLMSVNPGFSGQSFIPETLNKLRQVRKIIDESGYDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + NI+ QAGAD+ V GS+ F+Q
Sbjct: 181 IKANNIREAAQAGADMFVAGSAIFSQ 206
>gi|253997604|ref|YP_003049668.1| ribulose-phosphate 3-epimerase [Methylotenera mobilis JLW8]
gi|253984283|gb|ACT49141.1| ribulose-phosphate 3-epimerase [Methylotenera mobilis JLW8]
Length = 236
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 141/223 (63%), Gaps = 10/223 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFG---ADVIRSL 57
M + +I PSIL+A+F++LG+EI ++ +G +HFDVMD +VPN++ G D IR
Sbjct: 1 MDKTFRIAPSILSANFAKLGQEIEDVITSGTDIVHFDVMDNHYVPNLTIGPLVCDAIRET 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
++ D HLM+ +D I A AG +IITFHPE+S HI RSL + +G K+G+
Sbjct: 61 AKKVGALIDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRSLAMVRDLGCKSGLVF 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSIS 171
NP T ++ L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K++ A+A I R I
Sbjct: 121 NPATSLSYLDHVMDKVDMILLMSVNPGFGGQKFIPETLEKLKLARARIDAYYEKTGRQIW 180
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
LEVDGGV ++NI + +AGAD V GS+ F + A R N
Sbjct: 181 LEVDGGVNAQNIAEIARAGADTFVAGSAIFGSPKDTD-ANRYN 222
>gi|257465273|ref|ZP_05629644.1| ribulose-phosphate 3-epimerase [Actinobacillus minor 202]
gi|257450933|gb|EEV24976.1| ribulose-phosphate 3-epimerase [Actinobacillus minor 202]
Length = 224
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 134/199 (67%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+ ++LGE++ N+ +AG IHFDVMD FVPN++FG + ++LR Y +
Sbjct: 8 IAPSILSANLAKLGEDVKNVLEAGGDIIHFDVMDNHFVPNLTFGPAICQALRDYGITAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ I+ I A AG + ITFHPE++ HI R+L+ I +G K G+ NP TP+
Sbjct: 68 DVHLMVKPIERLIPEFAKAGANYITFHPEATDHIDRNLQLIRELGCKAGLVFNPATPLHY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+R+ + I SI LEVDGGV NI
Sbjct: 128 LDYVMDKVDMILLMGVNPGFGGQKFIPATLNKLREVRKRIDASGLSIRLEVDGGVKIDNI 187
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGAD V GS+ F+
Sbjct: 188 AEIAEAGADTFVAGSAIFD 206
>gi|71892339|ref|YP_278073.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796445|gb|AAZ41196.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 221
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+A+F++LGE+++N+ AGA +HFDVMD +VPN+S G+ V+RSLRSY S+
Sbjct: 6 IAPSILSANFAKLGEDVTNVVSAGADILHFDVMDNHYVPNLSVGSMVLRSLRSYGVSIPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM ID I+ A G + I+FHPE++ HI RSL+ I G K G+ NP T +
Sbjct: 66 DVHLMAKPIDRLISDFAAVGANYISFHPEATEHIDRSLQLIKEYGCKAGLVFNPSTTLNY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
LE V+D+ID+I++M+VNPGF GQ I + KIRQ + LI +I L VDGG+ +NI
Sbjct: 126 LEYVMDKIDLIVLMSVNPGFSGQLFIPMILNKIRQTRKLIDNTNYNIDLAVDGGINIKNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
S+++AGA ++GS+ F G +Y + +++ +
Sbjct: 186 HSILKAGATTFIIGSAIF---GSENYYEVIHNFR 216
>gi|222085738|ref|YP_002544268.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
gi|221723186|gb|ACM26342.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
Length = 221
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 136/220 (61%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P +I PSILA + +RL EE S +AG IHFDVMD FVPN+SFGA +++SLR
Sbjct: 1 MKPDNRIAPSILACNLARLAEECSAAIRAGGDLIHFDVMDNRFVPNLSFGAPLLKSLRED 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLM D I +AG + IT H E++PH+ RSL I +G G+A+N
Sbjct: 61 GFDGYVDVHLMTYEADGLIESFVEAGANSITIHYEATPHVHRSLNRIRELGCDVGLAVNI 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L + D +DM+L+MT+NPGFGGQ LI + +PKI A++L + S ++VDGG
Sbjct: 121 STPLDFLPYLKDRLDMLLVMTINPGFGGQALIPAALPKIEMARSLFEADRLSTHIQVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI+++ AGAD VVGS FF+ YA+R+ +
Sbjct: 181 VKLSNIRTIADAGADTFVVGSDFFSAD---DYAERVAQFR 217
>gi|16799580|ref|NP_469848.1| hypothetical protein lin0505 [Listeria innocua Clip11262]
gi|16412945|emb|CAC95737.1| lin0505 [Listeria innocua Clip11262]
Length = 216
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 137/217 (63%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F +G+I L L K L
Sbjct: 183 CTLAGADLIVVGSYLF--EGDIE--ANLEKLSKGVLT 215
>gi|319940002|ref|ZP_08014356.1| ribulose-phosphate 3-epimerase [Streptococcus anginosus 1_2_62CV]
gi|319810716|gb|EFW07043.1| ribulose-phosphate 3-epimerase [Streptococcus anginosus 1_2_62CV]
Length = 219
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 140/218 (64%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SYKIAPSILSADYANFESELKKLEATGADYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEDFARAGADIISIHAEATPHIHGALQKIRAAGVKASVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ K+R+ L + + +EVDGG+
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELVVLREVNQLDFDIEVDGGIDDE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I +AGA++ V GS F KG++ A ++ LK++
Sbjct: 183 TIGIAKEAGANVFVAGSYVF--KGDV--AHQVQTLKEA 216
>gi|119899616|ref|YP_934829.1| putative ribulose-phosphate 3-epimerase [Azoarcus sp. BH72]
gi|119672029|emb|CAL95943.1| putative ribulose-phosphate 3-epimerase [Azoarcus sp. BH72]
Length = 233
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 133/203 (65%), Gaps = 6/203 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSIL+A+F+RLGEE+S + +GA IHFDVMD +VPN++ G V +LR + +
Sbjct: 2 FRIAPSILSANFARLGEEVSQVVASGADWIHFDVMDNHYVPNLTIGPLVCEALRPVTTAP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG +IITFHPE+S HI RSL I G + G+ NP TP+
Sbjct: 62 IDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRSLGLIRDSGCQAGLVFNPATPLH 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGV 178
++ V+D++D++L+M+VNPGFGGQ+ I T+ K+R A+A + R I LE+DGGV
Sbjct: 122 YMDHVMDKLDVVLLMSVNPGFGGQKFIPETLNKLRAARARLDAYEAQSGRRILLEIDGGV 181
Query: 179 TSRNIKSLVQAGADLLVVGSSFF 201
NI + +AGAD V GS+ F
Sbjct: 182 KVDNIAEIARAGADTFVAGSAVF 204
>gi|159898813|ref|YP_001545060.1| ribulose-phosphate 3-epimerase [Herpetosiphon aurantiacus ATCC
23779]
gi|159891852|gb|ABX04932.1| Ribulose-phosphate 3-epimerase [Herpetosiphon aurantiacus ATCC
23779]
Length = 227
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 139/201 (69%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+A+F+ LG ++ + G I DVMDG FVPN++FG VI+++R +
Sbjct: 10 AIELTPSILSANFANLGADVQAADEVGCSWIQVDVMDGHFVPNLTFGPPVIQAIRPFFKG 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+S+ D+ + A AG + IT H E+S H+ R+++ IH +G GVA+NP TPV
Sbjct: 70 TLDVHLMVSNPDALLEAYAKAGANHITVHQEASVHLHRTIQRIHELGCTAGVALNPATPV 129
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+ L+D+I+++D++LIM+VNPGFGGQ IE ++ KI ++L+ +R ++VDGGV
Sbjct: 130 SSLDDIIEDLDLVLIMSVNPGFGGQSFIERSLAKIAAVRSLLDQRHHEAVIQVDGGVKPS 189
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
NI S+VQAGA L+ GS+F++
Sbjct: 190 NIASVVQAGATNLIAGSAFYS 210
>gi|39998463|ref|NP_954414.1| ribulose-phosphate 3-epimerase [Geobacter sulfurreducens PCA]
gi|39985410|gb|AAR36764.1| ribulose-phosphate 3-epimerase [Geobacter sulfurreducens PCA]
gi|298507407|gb|ADI86130.1| ribulose-phosphate 3-epimerase [Geobacter sulfurreducens KN400]
Length = 221
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 145/217 (66%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R ++
Sbjct: 3 KIAPSILSADFSRLGDEVRAVAAAGADYIHVDVMDGHFVPNITIGPLVVEAVRRVTELPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D +I A AG DII H E+S H+ R+++ I ++GKK GV++NP TP+
Sbjct: 63 DVHLMIEHPDRYIPDFAAAGSDIIVVHAEASTHLHRTIQLIKSLGKKAGVSLNPATPLNC 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++++D++L+MTVNPGFGGQ IE+ IPKI+ +A++ +R LEVDGGV NI
Sbjct: 123 LDYVLEDLDLVLLMTVNPGFGGQSFIEACIPKIQSLRAMLDRRGCEAELEVDGGVKIDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ F G Y + +LK+ A
Sbjct: 183 ARIAHAGADVFVAGSAIF---GSPDYEATIKELKRRA 216
>gi|37523117|ref|NP_926494.1| ribulose-phosphate 3-epimerase [Gloeobacter violaceus PCC 7421]
gi|35214120|dbj|BAC91489.1| ribulose-phosphate 3-epimerase [Gloeobacter violaceus PCC 7421]
Length = 233
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 144/223 (64%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PSIL+ADF+RLGEEI I +AGA IH DVMDG FVPNI+ G +++++R
Sbjct: 1 MAKPVVVAPSILSADFARLGEEIHAIDEAGADWIHVDVMDGRFVPNITIGPLIVKAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAIN 118
+ V D HLMI + +I A AG DIIT H E S+ H+ R+L I +GK+ GV++N
Sbjct: 61 TQKVLDVHLMIVEPEKYIADFAKAGADIITVHCEHNSTVHLHRALSQIKELGKQAGVSLN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP++++E V+D D++L+M+VNPGFGGQ I +PKI + K++ +R + +EVDG
Sbjct: 121 PSTPLSLIEYVLDLCDLVLVMSVNPGFGGQSFIPQVLPKIARLKSMCEERGLDPWIEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ N +++ GA+ +V GS F G YA+ + ++ S
Sbjct: 181 GLKPSNTWQVLEVGANAIVSGSGVFG-VGPARYAEAIEGVRAS 222
>gi|256370983|ref|YP_003108807.1| ribulose-phosphate 3-epimerase [Acidimicrobium ferrooxidans DSM
10331]
gi|256007567|gb|ACU53134.1| ribulose-phosphate 3-epimerase [Acidimicrobium ferrooxidans DSM
10331]
Length = 224
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 132/203 (65%), Gaps = 2/203 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL ADF +LG + ++ AG ++H+DVMDG FVPN++ GA VI S R +SD
Sbjct: 4 LEIAPSILPADFGQLGPTLQDLQAAGVDRVHWDVMDGVFVPNLTVGAPVIESCRRWSDLP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ HLMI D H+ AGC+++ H E++ H+ RSL I ++G + GVA+NP TP +
Sbjct: 64 FEAHLMIVDPDRHVESFVRAGCELVIIHAEATAHLHRSLGLIRSLGARAGVALNPSTPPS 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRN 182
+E V+D +D+IL+MTVNPGFGGQ+ + S PKI AL + + +EVDGGV
Sbjct: 124 AIEYVMDLLDVILVMTVNPGFGGQRYLASVEPKIASLAALRDLTNPTTRIEVDGGVAPDT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKG 205
+ +V+ G +++V GS+ F G
Sbjct: 184 LAGVVENGGEIVVSGSALFAHPG 206
>gi|82703486|ref|YP_413052.1| ribulose-phosphate 3-epimerase [Nitrosospira multiformis ATCC
25196]
gi|82411551|gb|ABB75660.1| ribulose-5-phosphate 3-epimerase [Nitrosospira multiformis ATCC
25196]
Length = 227
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+F++LGEE+S + +GA IHFDVMD +VPN++ G V ++R +D++
Sbjct: 5 RIAPSILSANFAKLGEEVSAVIDSGADFIHFDVMDNHYVPNLTIGPLVCEAIRPVTDAII 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG +II+FHPE++ HI R++ I G G+ NP TP+
Sbjct: 65 DVHLMVEPVDRIVPDFAKAGANIISFHPEATRHIDRTIGLIKEQGCMAGLVFNPATPLNY 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D++LIM+VNPGFGGQ+ I +PK+R+ + I + RSI LE+DGGV NI
Sbjct: 125 LDHVLDKLDLVLIMSVNPGFGGQKFIPEALPKLREVRRRIDESGRSILLEIDGGVKVDNI 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGAD V GS+ ++
Sbjct: 185 AEIARAGADTFVAGSAIYS 203
>gi|315125419|ref|YP_004067422.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas sp. SM9913]
gi|315013932|gb|ADT67270.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas sp. SM9913]
Length = 227
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 10 IAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGIKAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS I A+AG IITFHPE+S HI R+L+ I G + G+ NP T ++
Sbjct: 70 DVHLMVKPVDSLIPQFAEAGASIITFHPEASEHIDRTLQLIKDEGCQAGLVFNPATSLSY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+AK I R I LEVDGG+ NI
Sbjct: 130 LDHVMDKVDVILLMSVNPGFGGQSFIPQTLEKLREAKQRIVESGRDIRLEVDGGIKVDNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ +AGAD+ V GS+ FNQ
Sbjct: 190 AAAAEAGADMFVAGSAIFNQ 209
>gi|159029148|emb|CAO87508.1| rpe [Microcystis aeruginosa PCC 7806]
Length = 235
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 141/220 (64%), Gaps = 7/220 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI + PSIL+ADFS+LG +I + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 9 SIVVSPSILSADFSKLGADIEAVDKAGADWIHVDVMDGRFVPNITIGPLIVSAIRPYTKK 68
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP T
Sbjct: 69 PLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLCQIRELGKQAGVVLNPST 128
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++E V+ D++LIM+VNPGFGGQ I +PKIRQ + + ++ + +EVDGG+
Sbjct: 129 PLDLIEYVLHLCDLVLIMSVNPGFGGQSFIPEVVPKIRQLRQICDEKGLDPWIEVDGGLK 188
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN YA + ++ S
Sbjct: 189 PANTWQVLEAGANAIVAGSAVFNAP---DYAAAIEGIRNS 225
>gi|325971210|ref|YP_004247401.1| ribulose-phosphate 3-epimerase [Spirochaeta sp. Buddy]
gi|324026448|gb|ADY13207.1| ribulose-phosphate 3-epimerase [Spirochaeta sp. Buddy]
Length = 222
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 139/214 (64%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PS+L+ADFSR EE+ +I K+GA+ +H DVMDG FVPNI+FG I+ LRS+SD
Sbjct: 5 SLIIAPSMLSADFSRTAEEVESINKSGAQWVHLDVMDGMFVPNITFGPKFIKDLRSHSDL 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLM+ + +I A +G D IT H E+S H+ R+L+ I G K GV++ P + +
Sbjct: 65 VFDTHLMVDKPERYITHFAQSGSDYITVHAEASVHLHRTLQMIKDSGCKAGVSLIPSSSI 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ ++D +D+ILIMTVNPGFGGQ LI ST+ KI + ++ ++ L VDGGV
Sbjct: 125 TSILPILDMVDLILIMTVNPGFGGQSLIPSTLEKISELASIRTQKGYKYLLSVDGGVNLS 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + + GAD+ V GS+FF ++ + + + D
Sbjct: 185 TVNMIAERGADVAVCGSAFFCEQDRSGFIQAMWD 218
>gi|294341882|emb|CAZ90311.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Thiomonas sp. 3As]
Length = 232
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 135/212 (63%), Gaps = 12/212 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V +++ Y
Sbjct: 3 TYRIAPSILSADFARLGEEVRNVIDAGADFIHFDVMDNHYVPNLTIGPLVAEAIKPYCKK 62
Query: 64 ------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D HLM+ +D+ AG DI++FHPE+S H+ R+L+ I G K G+
Sbjct: 63 ADGTPITLDVHLMVEPVDAIAQSFVKAGADIVSFHPEASKHVDRTLQMIRDGGAKAGLVF 122
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSIS 171
NP TP+++L+ V+D++D++L+M+VNPGFGGQ IES++PK +Q +A + R I
Sbjct: 123 NPATPLSVLDYVMDKVDLVLLMSVNPGFGGQSFIESSLPKAKQVRAKLDAYKAQTGRDIL 182
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
LE+DGG+ NI + AG D V GS+ F +
Sbjct: 183 LEIDGGIKPDNIAAAAAAGVDTFVAGSAIFGK 214
>gi|294793658|ref|ZP_06758795.1| ribulose-phosphate 3-epimerase [Veillonella sp. 3_1_44]
gi|294455228|gb|EFG23600.1| ribulose-phosphate 3-epimerase [Veillonella sp. 3_1_44]
Length = 216
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 138/207 (66%), Gaps = 3/207 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EE+ +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFAVLSEELKSIEAAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I++ I K++QAK L + + +EVDGG+
Sbjct: 122 LLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNSTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ +AGA +LV GS+ F + S
Sbjct: 182 TCVPIKRAGATVLVAGSAVFGAEDRAS 208
>gi|319779008|ref|YP_004129921.1| Ribulose-phosphate 3-epimerase [Taylorella equigenitalis MCE9]
gi|317109032|gb|ADU91778.1| Ribulose-phosphate 3-epimerase [Taylorella equigenitalis MCE9]
Length = 241
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 132/204 (64%), Gaps = 7/204 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RLGEEI ++ +AGA IHFDVMD FVPN++ G V +++ Y+ +
Sbjct: 14 IRIAPSILSADFARLGEEIEDVIQAGADWIHFDVMDNHFVPNLTIGPMVCEAIKPYAKTT 73
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG D+ITFHPE+S HI R+L I G G+ NP TP+
Sbjct: 74 PIDVHLMVEPVDALIPMFAKAGADVITFHPEASHHIDRTLSLIRDHGCSAGLVFNPATPL 133
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+ V+D++D++L+M+VNPGFGGQ + S + K+ +A I R I LEVDGG
Sbjct: 134 EYMNYVMDKLDVVLLMSVNPGFGGQSFLPSALKKLSDTRARIDAYREKTGRGIFLEVDGG 193
Query: 178 VTSRNIKSLVQAGADLLVVGSSFF 201
V NI + AGAD V GS+ F
Sbjct: 194 VKVENIAQIHAAGADTFVAGSAIF 217
>gi|90962780|ref|YP_536695.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius UCC118]
gi|90821974|gb|ABE00612.1| Ribulose-phosphate 3-epimerase [Lactobacillus salivarius UCC118]
Length = 215
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 141/215 (65%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ + AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADMLNLGADVQKVEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PHI R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHIHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R+++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K + GA + V GS FN E ++A+R+N L+
Sbjct: 181 VKLCRETGATVAVAGSYVFNSGNE-THAERINKLR 214
>gi|313889774|ref|ZP_07823416.1| ribulose-phosphate 3-epimerase [Streptococcus pseudoporcinus SPIN
20026]
gi|313121819|gb|EFR44916.1| ribulose-phosphate 3-epimerase [Streptococcus pseudoporcinus SPIN
20026]
Length = 220
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 SHKIAPSILAADYANFAAELKRIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP TPV
Sbjct: 63 VFDCHLMVVDPERYVEAYAQAGADIMTIHLESTRHIHGALQKIKAAGMKAGVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
LE ++ +D +LIMTVNPGFGGQ I + K+++ + + + +EVDGGV +
Sbjct: 123 GALEPILSLVDQVLIMTVNPGFGGQAFIPECLDKVQKVVEMRQRAGLDFDIEVDGGVDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + +AGA++ V GS F +S + L
Sbjct: 183 TIAACAKAGANVFVAGSYLFKADDLVSQVQTL 214
>gi|238763774|ref|ZP_04624733.1| Ribulose-phosphate 3-epimerase [Yersinia kristensenii ATCC 33638]
gi|238698076|gb|EEP90834.1| Ribulose-phosphate 3-epimerase [Yersinia kristensenii ATCC 33638]
Length = 225
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG++ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGDDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ F+Q
Sbjct: 186 RDIAAAGADMFVAGSAIFSQ 205
>gi|302335705|ref|YP_003800912.1| ribulose-5-phosphate 3-epimerase [Olsenella uli DSM 7084]
gi|301319545|gb|ADK68032.1| ribulose-5-phosphate 3-epimerase [Olsenella uli DSM 7084]
Length = 228
Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 135/204 (66%), Gaps = 4/204 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
+T I PS+L+ADF+RLGEE+ +I+ A +H+DVMDG FVPN+SFG V+ +++
Sbjct: 4 LTEGTLIAPSVLSADFTRLGEELDSISDA--DYVHYDVMDGHFVPNLSFGTAVLSQVKAA 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+++ + +AG D ++FH E+ H R + IH G + GVA+NP
Sbjct: 62 TSLPIDVHLMVANPEECARWYLEAGADAVSFHWEAQTHAARLVSLIHDAGARAGVALNPA 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++LE +IDE+D++LIM+VNPGFGGQ+ +E TI K+R +AL + +EVDGG+
Sbjct: 122 TPVSVLEAIIDELDLVLIMSVNPGFGGQRFLEGTIGKLRTLRALCTSHGVRPLVEVDGGI 181
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
+ N + AGA+LLV GSS F
Sbjct: 182 GASNAGVVCAAGANLLVAGSSIFG 205
>gi|240948205|ref|ZP_04752599.1| ribulose-phosphate 3-epimerase [Actinobacillus minor NM305]
gi|240297445|gb|EER47971.1| ribulose-phosphate 3-epimerase [Actinobacillus minor NM305]
Length = 224
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 134/199 (67%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+ ++LGE++ N+ +AG IHFDVMD FVPN++FG + ++LR Y +
Sbjct: 8 IAPSILSANLAKLGEDVKNVLEAGGDIIHFDVMDNHFVPNLTFGPAICQALRDYGITAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ I+ I A AG + ITFHPE++ HI R+L+ I +G K G+ NP TP+
Sbjct: 68 DVHLMVKPIERLIPEFAKAGANYITFHPEATDHIDRNLQLIRELGCKAGLVFNPATPLHY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+R+ + I +I LEVDGGV NI
Sbjct: 128 LDYVMDKVDMILLMGVNPGFGGQKFIPATLNKLREVRKRIDASGLNIRLEVDGGVKIENI 187
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGAD V GS+ F+
Sbjct: 188 AEIAEAGADTFVAGSAIFD 206
>gi|183600690|ref|ZP_02962183.1| hypothetical protein PROSTU_04282 [Providencia stuartii ATCC 25827]
gi|188019792|gb|EDU57832.1| hypothetical protein PROSTU_04282 [Providencia stuartii ATCC 25827]
Length = 224
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTFGAPICKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG + I+FH E+S H+ R+L+ I G G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGANHISFHVEASEHVDRTLQLIKEHGCTAGLVFNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D++DMIL+M+VNPGFGGQ I T+ K+RQ + +I + I LE+DGGV NI
Sbjct: 126 LEYVMDKVDMILLMSVNPGFGGQSFIPHTLTKLRQVRKMIDESGYDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD V GS+ F G+ Y ++ ++K
Sbjct: 186 AEIAAAGADTFVAGSAIF---GQPDYKTVIDQMRKE 218
>gi|124267971|ref|YP_001021975.1| ribulose-5-phosphate 3-epimerase [Methylibium petroleiphilum PM1]
gi|124260746|gb|ABM95740.1| ribulose-5-phosphate 3-epimerase [Methylibium petroleiphilum PM1]
Length = 234
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 152/219 (69%), Gaps = 5/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PS+L+ADF+RLG+E+ ++ +AGA IHFDVMD +VPN++ G V ++++ ++
Sbjct: 3 AIRIAPSLLSADFARLGDEVRSVIEAGADLIHFDVMDNHYVPNLTIGPLVCQAIKPHATV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG DII+FHPE+S H+ R+++ I + G K G+ +NP TP+
Sbjct: 63 PIDVHLMVKPVDALIPMFAQAGADIISFHPEASEHVDRTIQLIRSHGIKAGLVLNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+L+ V+D++D++L+M+VNPGFGGQ IE T+PKI + LI + R + LEVDGGV
Sbjct: 123 NVLDHVLDQLDLVLLMSVNPGFGGQSFIEGTLPKIEAVRRLIDRSGRDVWLEVDGGVKVD 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N + + AGAD LV GS+ FN SYA + ++ +A
Sbjct: 183 NAQRVGAAGADTLVAGSAVFNSA---SYAHAIAGIRDNA 218
>gi|269797916|ref|YP_003311816.1| ribulose-phosphate 3-epimerase [Veillonella parvula DSM 2008]
gi|269094545|gb|ACZ24536.1| ribulose-phosphate 3-epimerase [Veillonella parvula DSM 2008]
Length = 216
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EE+ +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFAVLSEELKSIEAAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I++ I K++QAK L + + +EVDGG+
Sbjct: 122 LLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNSTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFF 201
+ +AGA +LV GS+ F
Sbjct: 182 TCVPIKRAGATVLVAGSAVF 201
>gi|260435784|ref|ZP_05789754.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 8109]
gi|260413658|gb|EEX06954.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 8109]
Length = 227
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 139/220 (63%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFARLGEEVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKKAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IES + KIR + + ++ + +EVDGG+
Sbjct: 123 PIDTLEYCLELCDLVLIMSVNPGFGGQSFIESQVQKIRDLRRMCDEKGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ YA+ + ++ S
Sbjct: 183 AGNAWKVIEAGANAIVSGSGVFNQP---DYAEAIKGIRNS 219
>gi|332523827|ref|ZP_08400079.1| ribulose-phosphate 3-epimerase [Streptococcus porcinus str.
Jelinkova 176]
gi|332315091|gb|EGJ28076.1| ribulose-phosphate 3-epimerase [Streptococcus porcinus str.
Jelinkova 176]
Length = 220
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 136/212 (64%), Gaps = 2/212 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 3 SHKIAPSILAADYANFATELKRIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + + ++ A AG DI+T H ES+ HI +L+ I A G K G+ INP TPV
Sbjct: 63 VFDCHLMVINPERYVEAYAQAGADIMTIHVESTHHIHGALQKIRAAGMKAGLVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+++E ++ +D +LIMTVNPGFGGQ I + K+++ + + + +EVDGGV +
Sbjct: 123 SVIEPLLSLVDQVLIMTVNPGFGGQAFIPECLDKVKKVVEMRQRAGLDFDIEVDGGVDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + +AGA++ V GS F +S + L
Sbjct: 183 TIAACAKAGANVFVAGSYLFKADDLVSQVQTL 214
>gi|238921468|ref|YP_002934983.1| ribulose-phosphate 3-epimerase, [Edwardsiella ictaluri 93-146]
gi|238871037|gb|ACR70748.1| ribulose-phosphate 3-epimerase, putative [Edwardsiella ictaluri
93-146]
Length = 225
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 143/220 (65%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MNPYL-IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALREY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I ADAG IITFHPE+S H+ R+L+ I A G K G+ +NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFADAGASIITFHPEASDHVDRTLQLIRACGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP++ L+ V+D +D IL+M+VNPGFGGQ I ST+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLSCLDYVMDRLDTILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDASGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI ++ AGAD+ V GS+ F G YA + D++
Sbjct: 180 VKVDNIGAIAAAGADMFVAGSAIF---GHADYAAVITDMR 216
>gi|225028025|ref|ZP_03717217.1| hypothetical protein EUBHAL_02294 [Eubacterium hallii DSM 3353]
gi|224954625|gb|EEG35834.1| hypothetical protein EUBHAL_02294 [Eubacterium hallii DSM 3353]
Length = 281
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ LG ++ AGA+ +H DVMDG FVP ISFG VI++LR +D +FD
Sbjct: 68 LAPSILSADFANLGRDVLTAIDAGAEYVHIDVMDGMFVPQISFGNPVIKALRPLTDVIFD 127
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I A AG DIIT H E+ H+ R + I GKK VAINP TP++ +
Sbjct: 128 AHLMIEDPGRYIEDFAKAGADIITVHAEACTHLDRVVHQIKDCGKKAAVAINPATPLSAI 187
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E V+ E+DM+L+MTVNPGFGGQ+ I K+R+ + +I +++ + ++VDGGV + NI
Sbjct: 188 EYVLPELDMVLVMTVNPGFGGQKYIPYCGEKVRELRKMITEKNLDVDIQVDGGVKALNIA 247
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + GA++ V GS+ F E + + L + K
Sbjct: 248 EIAECGANIFVCGSAVFEGNIEKNVKEILEQMNK 281
>gi|223043805|ref|ZP_03613848.1| ribulose-phosphate 3-epimerase [Staphylococcus capitis SK14]
gi|222442902|gb|EEE49004.1| ribulose-phosphate 3-epimerase [Staphylococcus capitis SK14]
Length = 214
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++++PS+L+ DF L EE+ + KA +HFDVMDG FVPNIS G ++ ++RSYS+
Sbjct: 2 VKVLPSLLSVDFLNLKEELDRLEKANVDGLHFDVMDGKFVPNISIGIPLLDAVRSYSNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I + AD G D+I+ H E++PHI R++ I + KK GV INP TPV
Sbjct: 62 IDVHLMIEQPENYIQLFADHGADMISVHVEATPHIHRAIEEIKLLNKKAGVVINPGTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ IE I KI Q + + +++ +EVDGG+
Sbjct: 122 SILLVLSIVDYVLVMTVNPGFGGQSFIEQCINKIEQLNQIKHENNLTFDIEVDGGINDST 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K V+ GA +LV GS FF Q YAK N LK
Sbjct: 182 SKYCVEQGATMLVTGSYFFKQN---DYAKVTNALK 213
>gi|307132892|ref|YP_003884908.1| D-ribulose-5-phosphate 3-epimerase [Dickeya dadantii 3937]
gi|306530421|gb|ADN00352.1| D-ribulose-5-phosphate 3-epimerase [Dickeya dadantii 3937]
Length = 225
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 135/206 (65%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTAQALAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITAPVDVHLMVKPVDRLIPDFAEAGASFITFHPEASEHVDRTLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
T ++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I I LEVDGG
Sbjct: 120 ATSLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ F Q
Sbjct: 180 VKVDNIAQIAAAGADMFVAGSAIFGQ 205
>gi|317154248|ref|YP_004122296.1| ribulose-phosphate 3-epimerase [Desulfovibrio aespoeensis Aspo-2]
gi|316944499|gb|ADU63550.1| ribulose-phosphate 3-epimerase [Desulfovibrio aespoeensis Aspo-2]
Length = 252
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 143/222 (64%), Gaps = 7/222 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ I PS+L++DFSRL EE+S++ +AG + +H+DVMDG FVPNI+FG VI R S+
Sbjct: 6 TVIISPSLLSSDFSRLAEELSSLEQAGVEWVHWDVMDGNFVPNITFGPPVIGRCRKVSNL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI +I DAG D+I H ES H+ R++ I +G + VAINP TP+
Sbjct: 66 FFDVHLMIDKPGRYIQEFVDAGADLICVHAESEIHLERTVAEIARLGARPAVAINPHTPL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTS 180
++++ ++ ++ M+LIM+VNPGFGGQ I +I KIR +I G ++ ++VDGGVT
Sbjct: 126 SVVQHLLPQLYMVLIMSVNPGFGGQSFIPFSIDKIRGLSHMIKLTGADTL-IQVDGGVTP 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
N+ L QAGAD+ V GS+FF G Y +RL +A +
Sbjct: 185 DNVAELHQAGADVFVSGSAFF---GHPPYDERLKTFMAAACS 223
>gi|322390321|ref|ZP_08063849.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis ATCC
903]
gi|321142969|gb|EFX38419.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis ATCC
903]
Length = 219
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 132/201 (65%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+AD++ E+ + AGA H DVMDG FVPNISFGA V+ S+R +S
Sbjct: 3 TMKIAPSILSADYANFESELKRLGAAGADYAHIDVMDGHFVPNISFGAGVVESMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+++ + HI A AG DII+ H E++PHI +L+ I G K V INP TPV
Sbjct: 63 VFDCHLMVTNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRQAGVKASVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ V++ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ +
Sbjct: 123 DSIKHVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELAALREEKGLDFDIEVDGGIDGQ 182
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I AGA++ V GS FN
Sbjct: 183 TISQAKAAGANVFVAGSYVFN 203
>gi|169834514|ref|YP_001695336.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|194396968|ref|YP_002038565.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae G54]
gi|168997016|gb|ACA37628.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|194356635|gb|ACF55083.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae G54]
Length = 218
Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I +G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRLLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 216
>gi|47177012|ref|YP_015623.1| ribulose-phosphate 3-epimerase [Oligotropha carboxidovorans OM5]
gi|47115403|emb|CAG28456.1| ribulose-phosphate-3-epimerase [Oligotropha carboxidovorans OM5]
Length = 202
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 125/184 (67%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I AGA IH DVMDG FVPNISFG DVI+++R + VFD HLMI+ +D ++ A AG
Sbjct: 4 IDAAGADWIHCDVMDGHFVPNISFGPDVIKAIRPRTKKVFDVHLMIAPVDPYLEAFAKAG 63
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
D+IT H E+ PH+ RSL+ I +GKK G I P TP +L +V+D +D+IL+M+VNPGF
Sbjct: 64 ADVITVHAEAGPHLDRSLQAIRNLGKKAGATICPATPENVLANVLDRLDLILVMSVNPGF 123
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
GGQQ I S + KIR+ +A+IG+R I LEVDGGV + AGAD +V G++ F
Sbjct: 124 GGQQFISSQLDKIRRIRAMIGERPIRLEVDGGVNVETAAQVAAAGADTVVAGAAVFKGGT 183
Query: 206 EISY 209
+ +Y
Sbjct: 184 QSAY 187
>gi|52080182|ref|YP_078973.1| ribulose-phosphate 3-epimerase [Bacillus licheniformis ATCC 14580]
gi|52785559|ref|YP_091388.1| ribulose-phosphate 3-epimerase [Bacillus licheniformis ATCC 14580]
gi|319646038|ref|ZP_08000268.1| rpe protein [Bacillus sp. BT1B_CT2]
gi|52003393|gb|AAU23335.1| ribulose-5-phosphate 3-epimerase Rpe [Bacillus licheniformis ATCC
14580]
gi|52348061|gb|AAU40695.1| Rpe [Bacillus licheniformis ATCC 14580]
gi|317391788|gb|EFV72585.1| rpe protein [Bacillus sp. BT1B_CT2]
Length = 218
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 146/216 (67%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF+RLGEEI ++ + GA IH DVMDG FVPN++ G V+ ++R ++
Sbjct: 2 VYVAPSILSADFARLGEEIRDVEQGGADFIHIDVMDGHFVPNLTIGPLVVEAVRPITELP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEAPDRYIPAFAKAGADILSVHVEACPHLHRTIQLIKEQGVKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+E V++++D++L+MTVNPGFGGQ I S +PKIRQ K + ++ ++ +EVDGGV
Sbjct: 122 QIEHVLEDLDLVLLMTVNPGFGGQSFISSVLPKIRQVKEMAEQKGLADLLIEVDGGVNKN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ ++AGA+LLV GS+ +N+K K ++D+K
Sbjct: 182 TARQCIEAGANLLVAGSAVYNEK---DRKKAISDIK 214
>gi|161505951|ref|YP_001573063.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160867298|gb|ABX23921.1| hypothetical protein SARI_04132 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 225
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGSSIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ F++
Sbjct: 186 GEIAAAGADMFVAGSAIFDK 205
>gi|322391323|ref|ZP_08064793.1| ribulose-phosphate 3-epimerase [Streptococcus peroris ATCC 700780]
gi|321145749|gb|EFX41140.1| ribulose-phosphate 3-epimerase [Streptococcus peroris ATCC 700780]
Length = 239
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + ++ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVANPEHYLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL K+ ++ +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREKKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVF--KGDVN--ERVQALRKQ 237
>gi|302389597|ref|YP_003825418.1| ribulose-5-phosphate 3-epimerase [Thermosediminibacter oceani DSM
16646]
gi|302200225|gb|ADL07795.1| ribulose-5-phosphate 3-epimerase [Thermosediminibacter oceani DSM
16646]
Length = 218
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRL +E+ + AGA +H DVMDG FVPNI+ G VI SLR F
Sbjct: 3 KIAPSILSADFSRLQDEVKKVEDAGADLLHIDVMDGHFVPNITIGPPVISSLRRRCSLPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +++ AG DI+T H ES+ HI R +++I G VA+NP TP+ +
Sbjct: 63 DVHLMIENPERYVDDFIKAGADILTVHVESTVHINRLVQSIRDKGVLPAVALNPGTPLNV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ +++++ M+L+MTVNPGFGGQ I+ + KI++ K+LI R++ ++VDGG+ N
Sbjct: 123 LDYILEDVYMVLLMTVNPGFGGQSFIKGMLRKIKELKSLIESRNLDVLIQVDGGINENNA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++ AGAD+LV GS+ +N S ++L +L
Sbjct: 183 REVISAGADILVAGSAVYNSPDPASVIRKLKNL 215
>gi|302392187|ref|YP_003828007.1| ribulose-phosphate 3-epimerase [Acetohalobium arabaticum DSM 5501]
gi|302204264|gb|ADL12942.1| ribulose-phosphate 3-epimerase [Acetohalobium arabaticum DSM 5501]
Length = 215
Score = 191 bits (485), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILAADFS L EEI ++KA + +H DVMDG FVPNI+ G V+ ++ +D +
Sbjct: 2 VKIAPSILAADFSNLEEEIKQVSKA--EYLHLDVMDGHFVPNITIGPLVVEAISDKTDQL 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I AD+G ++IT H E+ PH+ R+++ I K GVA+NP TP+
Sbjct: 60 LDAHLMIENPDQYIPDFADSGAELITVHAEACPHLHRTVQNIKEQEVKAGVALNPATPLT 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ ++ E+D++L+MTVNPGFGGQ+ IE +PKI + + I + + I ++VDGG+ N
Sbjct: 120 ALDHILPELDLVLLMTVNPGFGGQKFIEDMLPKINRLRKRIEQNNLDIDIQVDGGIKPYN 179
Query: 183 IKSLVQAGADLLVVGSSFF 201
+ +V+AGA+++V GS+ F
Sbjct: 180 VDRVVEAGANVIVAGSAIF 198
>gi|238916661|ref|YP_002930178.1| ribulose-phosphate 3-epimerase [Eubacterium eligens ATCC 27750]
gi|238872021|gb|ACR71731.1| ribulose-phosphate 3-epimerase [Eubacterium eligens ATCC 27750]
Length = 222
Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADF +LGEE+ I KAGA+ +H DVMDG FV +ISFG VI+S RS +D VFD H
Sbjct: 10 PSILSADFKKLGEELETIDKAGAEYVHVDVMDGLFVKSISFGMPVIKSARSATDKVFDVH 69
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I AG DIIT H E+ + +L I G K + +NP TPV+ +E
Sbjct: 70 LMIEEPIRYIEDFVKAGADIITVHVEACKDVVATLEKIKECGVKAAITLNPPTPVSAIEP 129
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSL 186
+D++DM+L+M+VNPGFGGQ+ I ++ K+++ ++L+ + + +E+DGGV + N+ S+
Sbjct: 130 YLDKVDMVLVMSVNPGFGGQKFIPESLDKVKEIRSLLDAKGLDTDIEIDGGVNAGNLASV 189
Query: 187 VQAGADLLVVGSSFFN 202
++AGA+++V GS+ F+
Sbjct: 190 LEAGANVIVAGSAIFS 205
>gi|307707666|ref|ZP_07644146.1| ribulose-phosphate 3-epimerase [Streptococcus mitis NCTC 12261]
gi|307616278|gb|EFN95471.1| ribulose-phosphate 3-epimerase [Streptococcus mitis NCTC 12261]
Length = 218
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|300864874|ref|ZP_07109721.1| ribulose-phosphate 3-epimerase [Oscillatoria sp. PCC 6506]
gi|300337116|emb|CBN54871.1| ribulose-phosphate 3-epimerase [Oscillatoria sp. PCC 6506]
Length = 233
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 141/220 (64%), Gaps = 7/220 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 7 STVISPSILSADFSRLGDEIRAVDLAGADWIHVDVMDGRFVPNITIGPLIVEAIRPVTSK 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP T
Sbjct: 67 PLDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLGQIRELGKQAGVVLNPST 126
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++E V++ D+ILIM+VNPGFGGQ I + +PKIR+ + + +R + +EVDGG+
Sbjct: 127 PLELIEHVLELCDLILIMSVNPGFGGQSFIPTVVPKIRKLRQMCDERGLDPWIEVDGGLK 186
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ F K YA + ++ S
Sbjct: 187 VDNTWQVLEAGANAIVAGSAVFKAK---DYAAAIEGIRHS 223
>gi|227536778|ref|ZP_03966827.1| ribulose-phosphate 3-epimerase [Sphingobacterium spiritivorum ATCC
33300]
gi|227243334|gb|EEI93349.1| ribulose-phosphate 3-epimerase [Sphingobacterium spiritivorum ATCC
33300]
Length = 226
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 135/197 (68%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF++L ++I + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 8 IAPSVLAADFAKLYDDIQMVNNSEADWFHIDIMDGVFVPNISFGFPVMQAIAKHATKPLD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ + D+G +IT H E+ H+ R+L I +G K GVA+NP TPV++L
Sbjct: 68 VHLMIVDPDRYLKVCKDSGAAVITVHYEACTHLHRTLAAIKELGCKAGVALNPHTPVSLL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+DVI +ID++ +M+VNPGFGGQ+ IE T KI++ + L ++ +E+DGGV +NI
Sbjct: 128 KDVIHDIDLVCLMSVNPGFGGQKFIEQTYNKIKELRMLAAGVNDNLLIEIDGGVGHQNIG 187
Query: 185 SLVQAGADLLVVGSSFF 201
+L++AGAD+LV GSS F
Sbjct: 188 ALLRAGADVLVAGSSVF 204
>gi|24371890|ref|NP_715932.1| ribulose-phosphate 3-epimerase [Shewanella oneidensis MR-1]
gi|24345716|gb|AAN53377.1|AE015477_7 ribulose-phosphate 3-epimerase [Shewanella oneidensis MR-1]
Length = 225
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 141/220 (64%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y +++++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKAVVDEMR 216
>gi|114045765|ref|YP_736315.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. MR-7]
gi|113887207|gb|ABI41258.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. MR-7]
Length = 225
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 141/220 (64%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y +++++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKAVVDEMR 216
>gi|157150446|ref|YP_001449518.1| ribulose-phosphate 3-epimerase [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075240|gb|ABV09923.1| ribulose-phosphate 3-epimerase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 219
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 134/208 (64%), Gaps = 4/208 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+AD++ E+ + AGA H DVMDG FVPNI+FGA V+ S+R +S
Sbjct: 3 QFKIAPSILSADYANFESELKRLEAAGADYAHIDVMDGHFVPNITFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+++ + HI AG DIIT H E++PHI +L+ I A G K GV INP TPV
Sbjct: 63 VFDCHLMVTNPEKHIEEFVRAGADIITIHVEATPHIHGALQQIRAAGVKAGVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++ V+ +D +L+MTVNPGFGGQ + T+ K+ + +L + + +EVDGG+ ++
Sbjct: 123 QAIKHVLGLVDQVLVMTVNPGFGGQAFLPETLVKVSELASLREQEHLQFDIEVDGGIDNQ 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
IK AGA++ V GS F KG++ +
Sbjct: 183 TIKKAKAAGANVFVAGSYVF--KGDVDH 208
>gi|227891997|ref|ZP_04009802.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius ATCC
11741]
gi|227866201|gb|EEJ73622.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius ATCC
11741]
Length = 215
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 141/215 (65%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ + AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADMLNLGADVQKVEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PH+ R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHLHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R+++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K + GA + V GS FN E ++A+R+N L+
Sbjct: 181 VKLCRETGATVAVAGSYVFNSGNE-THAERINKLR 214
>gi|307705632|ref|ZP_07642483.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK597]
gi|307620808|gb|EFN99893.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK597]
Length = 218
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLKFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|304412142|ref|ZP_07393751.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS183]
gi|307306886|ref|ZP_07586626.1| ribulose-phosphate 3-epimerase [Shewanella baltica BA175]
gi|304349408|gb|EFM13817.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS183]
gi|306910464|gb|EFN40894.1| ribulose-phosphate 3-epimerase [Shewanella baltica BA175]
Length = 224
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLG+++ + AG +HFDVMD +VPN++ G V ++LR+Y +
Sbjct: 6 IAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCQALRNYGITADI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKECGCKAGLVFNPATPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I I LEVDGGV NI
Sbjct: 126 LDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G+ Y +++++
Sbjct: 186 AEIAAAGADMFVAGSAIF---GKPDYTTVVDEMR 216
>gi|301063990|ref|ZP_07204455.1| ribulose-phosphate 3-epimerase [delta proteobacterium NaphS2]
gi|300441901|gb|EFK06201.1| ribulose-phosphate 3-epimerase [delta proteobacterium NaphS2]
Length = 216
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 138/216 (63%), Gaps = 5/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEEI + KAGA +H DVMDG FVPNI+ G V+ ++R +D F
Sbjct: 3 KIAPSILSADFTRLGEEILAVVKAGADYLHIDVMDGHFVPNITIGPLVVEAVRPTTDIPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMIS + +I AG +II+ H E++ H+ R+L I G K VA+NP TPV +
Sbjct: 63 DVHLMISQPELYIEDFVKAGANIISIHAETAIHLHRTLCHIRDCGAKAAVALNPATPVGV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++++DM+LIM+VNPGF Q+ I +PKI + I + I +EVDGGV I
Sbjct: 123 LDHVMNQLDMVLIMSVNPGFEAQKFIPEVLPKISALRKKIDELGLDIEIEVDGGVNHETI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+ V GS+ ++ K Y + DLK++
Sbjct: 183 GRVSSAGADVFVAGSAIYHSK---DYVATIRDLKRN 215
>gi|262195808|ref|YP_003267017.1| ribulose-phosphate 3-epimerase [Haliangium ochraceum DSM 14365]
gi|262079155|gb|ACY15124.1| ribulose-phosphate 3-epimerase [Haliangium ochraceum DSM 14365]
Length = 234
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 136/207 (65%), Gaps = 2/207 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ SI I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPN++ G V+ ++R+
Sbjct: 1 MSRSILIAPSILSADFARLGEEVRALAEAGADMLHVDVMDGHFVPNLTIGPPVVAAVRAC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM+ + D ++ A+AG DII H E+ PH+ R++ I+ +GK+ V +NP
Sbjct: 61 TELPLDVHLMVQNADDYLERYAEAGADIIAVHAEACPHLHRTVGAINELGKRACVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
T + + V++ + M+L+M+VNPGFGGQ I + +PKIR + +I +R I +EVDGGV
Sbjct: 121 TSLDSVRYVLEGLSMVLLMSVNPGFGGQSFIPAVLPKIRALREMIAERKLDIDVEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKG 205
N +V AGA+ LV GS F G
Sbjct: 181 KIDNTAEVVAAGANALVSGSGIFRHPG 207
>gi|219669859|ref|YP_002460294.1| ribulose-phosphate 3-epimerase [Desulfitobacterium hafniense DCB-2]
gi|219540119|gb|ACL21858.1| Ribulose-phosphate 3-epimerase [Desulfitobacterium hafniense DCB-2]
Length = 224
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 137/199 (68%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG++++ + KAGA+ +H DVMDG FVPNI+ G V+++LR YS
Sbjct: 2 IKIAPSILSADFAHLGDQVALVEKAGAEVLHIDVMDGHFVPNITIGPLVVKALRPYSQMR 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + I A AG D IT H E++PHI R+++ I +G GV+INP TP+
Sbjct: 62 FDVHLMIEHPERFIEEFAKAGADHITVHLEATPHIHRAIQQIKGLGLTAGVSINPATPLD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
++ ++DE+DM+LIM+VNPGFGGQ+ I + +PKI + + S +EVDGG+
Sbjct: 122 GIKYILDELDMVLIMSVNPGFGGQKFIPAVLPKIEVLHRHLDQMQSSCEIEVDGGINLDT 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
++V+AGA++LV G++ F
Sbjct: 182 APAVVKAGANILVAGAAVF 200
>gi|322387084|ref|ZP_08060695.1| ribulose-phosphate 3-epimerase [Streptococcus infantis ATCC 700779]
gi|321142071|gb|EFX37565.1| ribulose-phosphate 3-epimerase [Streptococcus infantis ATCC 700779]
Length = 239
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 134/205 (65%), Gaps = 4/205 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGQFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLKFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
+AGA + V GS F KG+++
Sbjct: 206 AQAKEAGATVFVAGSYVF--KGDVN 228
>gi|255531753|ref|YP_003092125.1| ribulose-phosphate 3-epimerase [Pedobacter heparinus DSM 2366]
gi|255344737|gb|ACU04063.1| ribulose-phosphate 3-epimerase [Pedobacter heparinus DSM 2366]
Length = 224
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 134/197 (68%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+ L +I I + A H D+MDG FVPNISFG V+ +++ Y++ D
Sbjct: 5 IAPSVLSADFANLQRDIEMINASAADWFHVDIMDGVFVPNISFGFPVMEAIKRYAEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I A AG +IT H E+ H+ R+++ IHA G + GVA+NP TPV++L
Sbjct: 65 VHLMIVNPDQYIERFAAAGAAMITVHYEACTHLHRTVQAIHATGCRAGVALNPHTPVSML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
+D++ ++DM+LIM+VNPGFGGQQ I +++ KI + + + + L EVDGGV N
Sbjct: 125 KDLLTDLDMVLIMSVNPGFGGQQFIPNSLNKIAELRKMASAVNPDLLIEVDGGVGLHNTA 184
Query: 185 SLVQAGADLLVVGSSFF 201
+L+QAGAD+LV G++ F
Sbjct: 185 ALLQAGADVLVAGNAIF 201
>gi|71909095|ref|YP_286682.1| ribulose-5-phosphate 3-epimerase [Dechloromonas aromatica RCB]
gi|71848716|gb|AAZ48212.1| ribulose-5-phosphate 3-epimerase [Dechloromonas aromatica RCB]
Length = 233
Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 133/201 (66%), Gaps = 6/201 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+A+F++LGEE++N+ +GA IHFDVMD +VPN++ G V ++R + + D
Sbjct: 8 IAPSILSANFAKLGEEVANVIASGADWIHFDVMDNHYVPNLTIGPLVCEAIRPCTTAPID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ +D I A AG +IITFHPE+S H+ RSL I G K G+ NP TP+ +
Sbjct: 68 VHLMVKPVDRIIPDFAKAGANIITFHPEASEHVDRSLSLIRDAGCKGGLVFNPATPLDYM 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ V+D+ID+IL+M+VNPGFGGQ+ I T+ K +QA+A + R I LE+DGGV +
Sbjct: 128 DYVLDKIDVILLMSVNPGFGGQKFIPGTLAKAKQARAKLDAYERETGRRIRLEIDGGVNT 187
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
NI + +AG D V GS+ +
Sbjct: 188 ANIAEIARAGVDAFVAGSAVY 208
>gi|331265647|ref|YP_004325277.1| pentose-5-phosphate-3-epimerase (ribulose-phosphate 3-epimerase)
[Streptococcus oralis Uo5]
gi|326682319|emb|CBY99936.1| pentose-5-phosphate-3-epimerase (ribulose-phosphate 3-epimerase)
[Streptococcus oralis Uo5]
Length = 218
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 142/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ ++H+ A AG DII+ H E++PHI +L+ I ++G K + INP TPV
Sbjct: 65 DCHLMVANPENHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSIVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ KIR+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKYVLHLVDQVLVMTVNPGFGGQAFLPETMDKIRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|117922320|ref|YP_871512.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. ANA-3]
gi|117614652|gb|ABK50106.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. ANA-3]
Length = 225
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 134/206 (65%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRPFL-IAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ F +
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGK 205
>gi|226355692|ref|YP_002785432.1| ribulose-phosphate 3-epimerase [Deinococcus deserti VCD115]
gi|226317682|gb|ACO45678.1| putative ribulose-phosphate 3-epimerase [Deinococcus deserti
VCD115]
Length = 235
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 139/216 (64%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+LA DF+RLGEE+ I GA H DVMDG FVPNISFG ++ + R S
Sbjct: 22 VKLAPSLLACDFARLGEELQAIQ--GADWAHVDVMDGAFVPNISFGLPILAAARRASSLF 79
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ A+AG D +T H ES+PH+ R+++ I +GKK GV +NP TP+
Sbjct: 80 MDVHLMIQHPERYLRDFAEAGADGLTVHVESTPHLHRAVQQIRELGKKAGVTLNPGTPLE 139
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
L V+ ++D++LIM+VNPGFGGQ+ I S++ +IR + + + ++VDGGVT +N
Sbjct: 140 ALRPVLADVDLVLIMSVNPGFGGQKFIPSSLERIRTLRRWLDDLGSAAEIQVDGGVTPQN 199
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+++V AGA LV GS+ + G + +RL + K
Sbjct: 200 ARAVVHAGATCLVAGSAVYGPDGAQAGLERLREALK 235
>gi|238754124|ref|ZP_04615482.1| Ribulose-phosphate 3-epimerase [Yersinia ruckeri ATCC 29473]
gi|238707620|gb|EEP99979.1| Ribulose-phosphate 3-epimerase [Yersinia ruckeri ATCC 29473]
Length = 231
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 141/220 (64%), Gaps = 6/220 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 13 IAPSILSADFARLGEDTAKVIAAGADVVHFDVMDNHYVPNLTMGPMVCQALRDYGITAPI 72
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 73 DVHLMVKPVDRIVPDFAKAGASYISFHPEASEHVDRTLQLIKDHGCKAGLVFNPATPLSY 132
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + I + I LEVDGGV NI
Sbjct: 133 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRQRIDESGYDIRLEVDGGVKVDNI 192
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + AGAD+ V GS+ F G+ YA ++ ++ A+
Sbjct: 193 REVAAAGADMFVAGSAIF---GKPDYAAVIDAMRSELAAV 229
>gi|303280253|ref|XP_003059419.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459255|gb|EEH56551.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 270
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 142/221 (64%), Gaps = 8/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSIL+A+F+ LG E+ + +AGA+ IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 49 SVIVSPSILSANFATLGAEVKAVDEAGAEWIHIDVMDGRFVPNITIGPLVVDALRPVTDK 108
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAINPE 120
V DCHLMI + + A AG DII+ H + S+ H+ R++ I +G K GV +NP
Sbjct: 109 VLDCHLMIVEPELRVADFAKAGADIISVHADPGTSTIHLHRTVNQIKDLGCKAGVVLNPG 168
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP LE V+D +D+IL+M+VNPGFGGQ IES + KI + KA+ + ++ +EVDGGV
Sbjct: 169 TPPECLEYVLDCVDLILVMSVNPGFGGQSFIESQVEKIAKIKAMCDAKGVNPWIEVDGGV 228
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
T N +++AGA+ LV GS+ FN YA + +K S
Sbjct: 229 TPANAYKVIEAGANALVAGSAVFNSP---DYAAAIAGIKAS 266
>gi|320197340|gb|EFW71955.1| Ribulose-phosphate 3-epimerase [Escherichia coli WV_060327]
Length = 225
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENDCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADIFVAGSAIFDQP---DYKKVIDEMR 216
>gi|209521278|ref|ZP_03269997.1| Ribulose-phosphate 3-epimerase [Burkholderia sp. H160]
gi|209498285|gb|EDZ98421.1| Ribulose-phosphate 3-epimerase [Burkholderia sp. H160]
Length = 235
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+RL +EI ++T AGA IH DVMD +VPN++ G V ++R Y+ FD
Sbjct: 6 IAPSLLSADFARLADEIRDVTAAGADWIHLDVMDNHYVPNLTVGPLVCSAIRPYTSLPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM + +D + A+AG ++I+FHPE++ H+ R++ I + G + G+A+NP TP+A+L
Sbjct: 66 VHLMTTPVDPLVTAFAEAGANLISFHPEATLHVHRTIELIRSHGARAGLALNPATPLAVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ V++ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVDGG+ +
Sbjct: 126 DHVLEMLDVVLVMSVNPGFGGQAFIAETLDKLRLLRERVDTTMQRTGRPLLIEVDGGLKA 185
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
NI + AGAD+ V GS+ F
Sbjct: 186 SNIARVATAGADVFVAGSAVF 206
>gi|89895429|ref|YP_518916.1| hypothetical protein DSY2683 [Desulfitobacterium hafniense Y51]
gi|89334877|dbj|BAE84472.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 232
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 137/199 (68%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG++++ + KAGA+ +H DVMDG FVPNI+ G V+++LR YS
Sbjct: 10 IKIAPSILSADFAHLGDQVALVEKAGAEVLHIDVMDGHFVPNITIGPLVVKALRPYSQMR 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + I A AG D IT H E++PHI R+++ I +G GV+INP TP+
Sbjct: 70 FDVHLMIEHPERFIEEFAKAGADHITVHLEATPHIHRAIQQIKGLGLTAGVSINPATPLD 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
++ ++DE+DM+LIM+VNPGFGGQ+ I + +PKI + + S +EVDGG+
Sbjct: 130 GIKYILDELDMVLIMSVNPGFGGQKFIPAVLPKIEVLHRHLDQMQSSCEIEVDGGINLDT 189
Query: 183 IKSLVQAGADLLVVGSSFF 201
++V+AGA++LV G++ F
Sbjct: 190 APAVVKAGANILVAGAAVF 208
>gi|194292436|ref|YP_002008343.1| d-ribulose-5-phosphate 3-epimerase (rubisco operon) [Cupriavidus
taiwanensis LMG 19424]
gi|193226340|emb|CAQ72289.1| D-ribulose-5-phosphate 3-epimerase (RUBISCO operon) [Cupriavidus
taiwanensis LMG 19424]
Length = 233
Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 140/223 (62%), Gaps = 7/223 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++++ PSIL+ADF+RLGEE+ + GA IHFDVMD +VPN++ G V ++R
Sbjct: 8 AVRLAPSILSADFARLGEEVCAVEAGGADLIHFDVMDNHYVPNLTIGPMVCEAIRPLVSV 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG II+FHPE+S H+ R++ I G K G+ +NP TP+
Sbjct: 68 PIDVHLMVEPVDALIPLFARAGAGIISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATPL 127
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
L+ + ++D++L+M+VNPGFGGQ I + K+RQ +A I G R + LEVDGG
Sbjct: 128 GWLDHTLAQLDLVLLMSVNPGFGGQAFIPGVLDKVRQVRARIDRQQAAGGREVWLEVDGG 187
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKS 219
V + NI ++ +AGAD V GS+ F + YA L L+++
Sbjct: 188 VKADNIGAIARAGADTFVAGSAVFGAPDVDGGYAGILRRLREA 230
>gi|297184128|gb|ADI20247.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 217
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF L + + K+ A H DVMDG FVPNIS+G V++++ + V D
Sbjct: 6 ISPSLLAADFGNLQRDCQMVNKSQADWFHIDVMDGVFVPNISYGMPVVKTMAENCEKVMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I D G DI+T H E+ H+ R+++ IH G K GVA+NP TPV++L
Sbjct: 66 VHLMIVQPERYIQTFKDCGADILTVHAEACTHLHRTIQEIHNAGMKAGVALNPHTPVSVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++D +L+M+VNPGFGGQ+ IE+TI K QA+ LI + + +E+DGGV
Sbjct: 126 EDIIQDLDEVLLMSVNPGFGGQKFIENTIKKTAQARELIDRTASKALIEIDGGVNLETGA 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD LV GS F I+ L L
Sbjct: 186 RLLAAGADALVAGSFVFKSDDPIATIAALKAL 217
>gi|38638084|ref|NP_943058.1| ribulose-5-phosphate 3-epimerase [Ralstonia eutropha H16]
gi|729236|sp|Q04539|RPEP_RALEH RecName: Full=Ribulose-phosphate 3-epimerase, plasmid; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|150678|gb|AAA98231.1| D-ribulose-5-phosphate 3 epimerase [Plasmid pHG1]
gi|32527422|gb|AAP86172.1| ribulose-5-phosphate 3-epimerase [Ralstonia eutropha H16]
Length = 241
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 143/224 (63%), Gaps = 7/224 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+ADF+RLGEE+ I GA +HFDVMD +V N++ G V ++R
Sbjct: 15 AIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPLVSI 74
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG ++I+FHPE+S H+ R++ I G K G+ +NP TP+
Sbjct: 75 PIDVHLMVEPVDALIPMFAKAGANLISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATPL 134
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
+ L+ +D++D++L+M+VNPGFGGQ I + K+RQA+A I G R + LE+DGG
Sbjct: 135 SWLDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVAAGGRPVWLEIDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKSA 220
V + NI + +AGAD V GS+ F + Y L+ L+++A
Sbjct: 195 VKADNITEIARAGADTFVAGSAVFGAPDADGGYRGILHRLREAA 238
>gi|312143905|ref|YP_003995351.1| ribulose-phosphate 3-epimerase [Halanaerobium sp. 'sapolanicus']
gi|311904556|gb|ADQ14997.1| ribulose-phosphate 3-epimerase [Halanaerobium sp. 'sapolanicus']
Length = 218
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADFS+L EE+ ++ +A +HFDVMDG +VPNI+FG +I++LRS+SD F
Sbjct: 4 EFAPSLLSADFSQLKEELKSVKEA--DYLHFDVMDGVYVPNITFGPTLIKALRSHSDLPF 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + +I A+AG DI+T H E++ H+ R ++ I MG K G ++NP TP+
Sbjct: 62 DTHLMITKPERYIKEFAEAGSDILTVHVEATEHVHRVIQMIKEMGIKAGCSLNPATPLEG 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ ++ ++D ILIM+VNPGFGGQ I KI+ +I + + +EVDGG+ + N+
Sbjct: 122 LKYLLPDLDQILIMSVNPGFGGQAYIPQITEKIKSLSKIIKENNYDCKIEVDGGIKTHNL 181
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K++V AGAD++V GS+ F Q+
Sbjct: 182 KTIVDAGADIIVAGSAIFGQE 202
>gi|217977382|ref|YP_002361529.1| Ribulose-phosphate 3-epimerase [Methylocella silvestris BL2]
gi|217502758|gb|ACK50167.1| Ribulose-phosphate 3-epimerase [Methylocella silvestris BL2]
Length = 227
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 138/202 (68%), Gaps = 1/202 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF++LGEE+ IT+AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 1 MNPLV-IAPSILSADFAKLGEEVRAITEAGADWIHVDVMDGHFVPNITIGPAIVAALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMI+ D ++ A AG D+I H E+ PH+ RSL+ I A+GKK GV +NP
Sbjct: 60 THLPFDVHLMIAPCDPYLEAFAQAGADLIAVHVEAGPHLHRSLQAIRALGKKAGVVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+P + ++ V+D +D++L+M+VNPGFGGQ I S + KI + KA+IG R I +EVDGGV
Sbjct: 120 SPASSVKHVLDLLDLVLVMSVNPGFGGQAFIPSAVEKIAELKAMIGDRPIRIEVDGGVNP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
+ AGAD LV GS+ F
Sbjct: 180 ETAALVAAAGADTLVAGSAVFK 201
>gi|219110571|ref|XP_002177037.1| plastidic ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217411572|gb|EEC51500.1| plastidic ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 260
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 139/219 (63%), Gaps = 3/219 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ N+ +AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 41 IAPSILSADFARLGEEVDNVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPI 100
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D+ I DAG ITFHPE++ H+ RSL+ I G K G+ NP T +
Sbjct: 101 DVHLMVSPVDAAIQDFIDAGASYITFHPEATNHVDRSLQLIKNGGCKAGLVFNPATSLDA 160
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ V+D++D+IL+M+VNPGFGGQ I + + K R+A+ LI I LE+DGGV + NI
Sbjct: 161 AKFVMDKLDIILLMSVNPGFGGQAFIPAVLDKAREARQLIDDAGIDCRLEIDGGVKTENI 220
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
K + AG D+ V GS+ + + K D ++ LA
Sbjct: 221 KEIKDAGVDMFVAGSAILKEPRTLEAYKETIDTMRAELA 259
>gi|153002577|ref|YP_001368258.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS185]
gi|151367195|gb|ABS10195.1| Ribulose-phosphate 3-epimerase [Shewanella baltica OS185]
Length = 224
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AG +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MRPFL-IAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCQALRNY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKECGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F G+ Y +++++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIF---GKPDYKAVVDEMR 216
>gi|126176292|ref|YP_001052441.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS155]
gi|160877298|ref|YP_001556614.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS195]
gi|217975142|ref|YP_002359893.1| Ribulose-phosphate 3-epimerase [Shewanella baltica OS223]
gi|125999497|gb|ABN63572.1| ribulose-5-phosphate 3-epimerase [Shewanella baltica OS155]
gi|160862820|gb|ABX51354.1| Ribulose-phosphate 3-epimerase [Shewanella baltica OS195]
gi|217500277|gb|ACK48470.1| Ribulose-phosphate 3-epimerase [Shewanella baltica OS223]
gi|315269503|gb|ADT96356.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS678]
Length = 224
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLG+++ + AG +HFDVMD +VPN++ G V ++LR+Y +
Sbjct: 6 IAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCQALRNYGITADI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKECGCKAGLVFNPATPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I I LEVDGGV NI
Sbjct: 126 LDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G+ Y +++++
Sbjct: 186 AEIAAAGADMFVAGSAIF---GKPDYKTVVDEMR 216
>gi|322375825|ref|ZP_08050336.1| ribulose-phosphate 3-epimerase [Streptococcus sp. C300]
gi|321279093|gb|EFX56135.1| ribulose-phosphate 3-epimerase [Streptococcus sp. C300]
Length = 241
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 28 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 87
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 88 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVDINPGTPVEA 147
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 148 IKHVLHLVDQVLVMTVNPGFGGQTFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 207
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 208 SQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 239
>gi|332829254|gb|EGK01908.1| ribulose-phosphate 3-epimerase [Dysgonomonas gadei ATCC BAA-286]
Length = 217
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L+A+F L ++ I K+ A H DVMDG FVPNISFG +I+ + + +
Sbjct: 2 SHKIAPSLLSANFLNLQADVEMINKSEADWFHCDVMDGSFVPNISFGFPIIKQISTIAKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D +I+ + +AG ++ H E+ H+ R++ IH G K GV +NP TPV
Sbjct: 62 PLDVHLMIVNPDKYISQVKEAGAYMMNVHYEACTHLHRTVSGIHEAGMKAGVTLNPHTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LED++ ++DM+L+MTVNPGFGGQ+ IE ++ K+ + K +I KR++ +EVDGGV +
Sbjct: 122 SLLEDILQDVDMVLLMTVNPGFGGQKFIEHSLSKVSRLKDMILKRNLQTLIEVDGGVNLQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K LV AGAD+LV G++ F + +L LK
Sbjct: 182 TGKQLVDAGADVLVAGNAVFADADPVEMIHKLKSLK 217
>gi|168274231|dbj|BAG09538.1| ribulose-phosphate 3-epimerase [Porphyra yezoensis]
Length = 274
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 140/220 (63%), Gaps = 8/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF++LG E++ I AG +H DVMDG FVPNI+ G V+ +LR +D V
Sbjct: 52 VVVSPSILSADFAKLGAEVAAIDTAGCDWVHVDVMDGRFVPNITIGPLVVDALRPVTDKV 111
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHP--ESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + I AG DII+ H ES+ H+ R+L+ I +G GV +NP TP
Sbjct: 112 LDVHLMIVQPELLIPDFIKAGADIISVHAEGESTIHLHRTLKLIRDLGASAGVVLNPATP 171
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVT 179
V++LE VI+ D++L+M+VNPGFGGQ IES K+ + +A+ G + + +EVDGGV
Sbjct: 172 VSVLEYVIELCDLVLVMSVNPGFGGQSFIESATDKVAEVRAMADRKGMKDLWIEVDGGVK 231
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +VQAGA+ LV GS+ FN YA+ + D+K +
Sbjct: 232 GDNAYKVVQAGANALVAGSAVFNSP---DYAQAIKDIKAA 268
>gi|292490814|ref|YP_003526253.1| ribulose-phosphate 3-epimerase [Nitrosococcus halophilus Nc4]
gi|291579409|gb|ADE13866.1| ribulose-phosphate 3-epimerase [Nitrosococcus halophilus Nc4]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 134/202 (66%), Gaps = 3/202 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
+I PSIL+ADF+RLGEE++ + AGA +HFDVMD +VPN++ G + +LR + +
Sbjct: 5 KIAPSILSADFARLGEEVTAVLDAGADMVHFDVMDNHYVPNLTIGPLICEALRKHGITAD 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D + A AG + ITFHPE+S HI R+L+ IH G K G+ NP T +
Sbjct: 65 IDVHLMVKPVDRIVPDFAKAGANYITFHPEASEHIDRTLQLIHDEGCKAGLVFNPATSLD 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ V+D++DM+LIM+VNPGFGGQ+ I S + K+++ + +I S I LE+DGGV N
Sbjct: 125 YLQYVLDKVDMVLIMSVNPGFGGQKFIPSALDKLQEVRRIIDASSHPIRLEIDGGVKVDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I+ + AGAD V GS+ F +
Sbjct: 185 IRQIAAAGADTFVAGSAIFQSE 206
>gi|313634772|gb|EFS01210.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
gi|313639386|gb|EFS04264.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL S4-171]
Length = 213
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 133/206 (64%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D++D IL+MTVNPG GGQ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDLDCILLMTVNPGLGGQTFFQSSLEKIRKTKAYIGDRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAK 211
AGADL+VVGS F E + A+
Sbjct: 183 CTLAGADLIVVGSYLFEGDIEANLAE 208
>gi|300773362|ref|ZP_07083231.1| ribulose-phosphate 3-epimerase [Sphingobacterium spiritivorum ATCC
33861]
gi|300759533|gb|EFK56360.1| ribulose-phosphate 3-epimerase [Sphingobacterium spiritivorum ATCC
33861]
Length = 226
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 135/197 (68%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF++L ++I + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 8 IAPSVLAADFAKLYDDIQMVNNSEADWFHIDIMDGVFVPNISFGFPVMQAIAKHATKPLD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ + D+G +IT H E+ H+ R+L I +G K GVA+NP TPV++L
Sbjct: 68 VHLMIVDPDRYLKVCKDSGAAVITVHYEACTHLHRTLAAIKELGCKAGVALNPHTPVSLL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+DVI +ID++ +M+VNPGFGGQ+ IE T KI++ + L ++ +E+DGGV +NI
Sbjct: 128 KDVIRDIDLVCLMSVNPGFGGQKFIEQTYNKIKELRMLAAGVNDNLLIEIDGGVGHQNIG 187
Query: 185 SLVQAGADLLVVGSSFF 201
+L++AGAD+LV GSS F
Sbjct: 188 ALLRAGADVLVAGSSVF 204
>gi|262281835|ref|ZP_06059604.1| ribulose-phosphate 3-epimerase [Streptococcus sp. 2_1_36FAA]
gi|262262289|gb|EEY80986.1| ribulose-phosphate 3-epimerase [Streptococcus sp. 2_1_36FAA]
Length = 219
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 141/218 (64%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+AD++ E+ + AGA H DVMDG FVPNI+FGA V+ S+R +S
Sbjct: 3 QFKISPSILSADYANFESELKRLEAAGADYAHIDVMDGHFVPNITFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+++ + HI AG DIIT H E++PHI +L+ I A G K GV INP TPV
Sbjct: 63 VFDCHLMVTNPEKHIEDFVRAGADIITIHVEATPHIHGALQQIRAAGVKAGVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++ V+ +D +L+MTVNPGFGGQ + T+ K+ + +L + + +EVDGG+ ++
Sbjct: 123 QAIKHVLGLVDQVLVMTVNPGFGGQAFLPETLVKVSELASLREQEQLQFDIEVDGGIDNQ 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
IK +AGA++ V GS F KG++ + ++ LK++
Sbjct: 183 TIKLAKEAGANVFVAGSYVF--KGDVDH--QVQTLKEA 216
>gi|225011623|ref|ZP_03702061.1| Ribulose-phosphate 3-epimerase [Flavobacteria bacterium MS024-2A]
gi|225004126|gb|EEG42098.1| Ribulose-phosphate 3-epimerase [Flavobacteria bacterium MS024-2A]
Length = 216
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 132/215 (61%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSILAADF+ L + I + A H D+MDG FVPNISFG V+ +++ ++
Sbjct: 2 SIKIAPSILAADFANLERDSKMINASEADWFHIDIMDGVFVPNISFGMPVLAAIQKHAKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D +I AD G ++T H E+ H+ R+L+ I + G K GVA+NP TPV
Sbjct: 62 PLDVHLMIIEPDRYIETFADLGATVLTVHYEACNHLHRTLQKIKSCGMKAGVALNPHTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
L +I +ID++ IM+VNPGFGGQ IE+T K+++ K LI K S +E+DGGVT
Sbjct: 122 NCLNSIIQDIDLVCIMSVNPGFGGQSFIENTYQKVKELKQLITLHKSSCLIEIDGGVTDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N +LV GAD+LV GS F K L ++
Sbjct: 182 NASALVTCGADVLVAGSYVFKASNPAKNIKLLKEV 216
>gi|85060283|ref|YP_455985.1| ribulose-phosphate 3-epimerase [Sodalis glossinidius str.
'morsitans']
gi|84780803|dbj|BAE75580.1| ribulose-phosphate 3-epimerase [Sodalis glossinidius str.
'morsitans']
Length = 226
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG + + + AGA +HFDVMD +VPN++ G V+++LR+Y +
Sbjct: 6 IAPSILSADFARLGGDTARVLAAGADVVHFDVMDNHYVPNLTMGPMVLKALRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S H+ RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRLIPDFAAAGASYITFHPEASQHVDRSLQLIKEHGCKAGLVFNPATPLSC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D++D+IL+M+VNPGFGGQ + ST+ K+RQA+ +I + R I LEVDGGV NI
Sbjct: 126 LEYVMDKLDVILLMSVNPGFGGQSFLPSTLDKLRQARQIIDRSGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
++ AGAD+ V GS+ F+Q
Sbjct: 186 GAIAAAGADMFVAGSAIFSQ 205
>gi|170690077|ref|ZP_02881244.1| Ribulose-phosphate 3-epimerase [Burkholderia graminis C4D1M]
gi|170144512|gb|EDT12673.1| Ribulose-phosphate 3-epimerase [Burkholderia graminis C4D1M]
Length = 237
Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 140/217 (64%), Gaps = 9/217 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+RL +EI ++T AGA +H DVMD +VPN++ G V ++R ++ D
Sbjct: 6 IAPSLLSADFARLADEIRDVTVAGADWVHLDVMDNHYVPNLTVGPLVCSAIRPHTRVPID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM +D + A+AG + I+FHPE+S H+ R++ I G + G+A+NP TP+A+L
Sbjct: 66 VHLMTMPVDPLVIAFAEAGANTISFHPEASLHVHRTIELIKTQGARVGLALNPATPLAVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ VI+ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVDGGV +
Sbjct: 126 DHVIERLDVVLVMSVNPGFGGQAFIPETLAKLRMLRERVDATMQRTGRPLLIEVDGGVKA 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F G YA+ ++D++
Sbjct: 186 SNIAQIAAAGADVFVAGSAVF---GADDYARAISDMR 219
>gi|206890008|ref|YP_002248171.1| ribulose-phosphate 3-epimerase [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741946|gb|ACI21003.1| ribulose-phosphate 3-epimerase [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 219
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 143/215 (66%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF RL EE+ + +AGA IH DVMDGCFVPNI+ G ++ +++ + D
Sbjct: 4 IAPSILSADFGRLAEEVKHAEQAGADMIHIDVMDGCFVPNITIGPLIVEAVKKATMLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I AG DI+T H E+ PH+ R++ I G + GV++NP T ++ +
Sbjct: 64 VHLMIIQPEKYIEDFVKAGADILTVHVEACPHLHRTVWQIKESGIRVGVSLNPATSLSSI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
E++I +ID+ILIM+VNPGFGGQ+ I ST+ KI +AK +I K +EVDGGV N K
Sbjct: 124 EEIIHDIDLILIMSVNPGFGGQKFIPSTLDKINRAKKMILSNKLQTVIEVDGGVKLENAK 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+VQAGAD+LV+GS+FF QK Y K + L+K
Sbjct: 184 KIVQAGADILVMGSAFFKQK---DYKKFMKQLRKE 215
>gi|170016873|ref|YP_001727792.1| ribulose-phosphate 3-epimerase [Leuconostoc citreum KM20]
gi|169803730|gb|ACA82348.1| Ribulose-phosphate 3-epimerase [Leuconostoc citreum KM20]
Length = 218
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 141/215 (65%), Gaps = 7/215 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+AD++ L ++ + KAGA+ +H DVMDG FVP+IS+G + ++ LR +D + D
Sbjct: 5 ISPSILSADYTNLERDVKLVEKAGAEYLHIDVMDGSFVPSISYGPNWVKQLRPETDMILD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + + ++ ADAG DII H E++PHI R+L+ I G K V INP TPV +
Sbjct: 65 VHLMVINPEKIVDAFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVTAI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSRNI 183
E V+D +D +L+MTVNPGFGGQ+ + STI KI Q KAL +G + +E+DGGV + I
Sbjct: 125 EPVLDMVDQVLVMTVNPGFGGQKFLPSTIKKIAQLKALKDAMGYQ-FDIEIDGGVNNETI 183
Query: 184 KSLVQAGADLLVVGSSFFNQ---KGEISYAKRLND 215
+ +AGA++ V GS +++ +I+ K L D
Sbjct: 184 TAAYEAGANVFVAGSYVYDKVDPAAKIATLKALTD 218
>gi|148245099|ref|YP_001219793.1| ribulose-phosphate 3-epimerase [Candidatus Vesicomyosocius okutanii
HA]
gi|146326926|dbj|BAF62069.1| ribulose-phosphate 3-epimerase [Candidatus Vesicomyosocius okutanii
HA]
Length = 223
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADFSRLGEE+ N+ K GA IHFDVMD +VPN++ G V +L+++ S
Sbjct: 7 IAPSILSADFSRLGEEVDNVLKDGADIIHFDVMDNHYVPNLTIGPLVCEALKNHGVSAPI 66
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I AG ITFHPE+S HI R+L I G K G+ NP TP+ +
Sbjct: 67 DIHLMVKPVDNIIPNFIKAGASYITFHPEASEHIDRTLGMIQEGGCKAGLVFNPATPIHV 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
LE+V+ ++D+IL+M+VNPGFGGQ I T+ K R+ + LI R+I LE+DGG+ NI
Sbjct: 127 LENVMSKLDIILLMSVNPGFGGQSFIPHTLDKCREVRKLIDASGRNIRLEIDGGIKINNI 186
Query: 184 KSLVQAGADLLVVGSSFF 201
+ +AGAD V GS+ F
Sbjct: 187 HEISKAGADTFVAGSAIF 204
>gi|82778799|ref|YP_405148.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae Sd197]
gi|309785876|ref|ZP_07680507.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 1617]
gi|81242947|gb|ABB63657.1| D-ribulose-5-phosphate 3-epimerase [Shigella dysenteriae Sd197]
gi|308926996|gb|EFP72472.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 1617]
Length = 225
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SL +Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLCNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQP---DYKKVIDEMR 216
>gi|153809817|ref|ZP_01962485.1| hypothetical protein RUMOBE_00198 [Ruminococcus obeum ATCC 29174]
gi|149833995|gb|EDM89075.1| hypothetical protein RUMOBE_00198 [Ruminococcus obeum ATCC 29174]
Length = 224
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 140/217 (64%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGE+I + KAG + +H DVMDG FVP+ISFG VIRS+R S F
Sbjct: 4 RLCPSILSADFNRLGEQIQTLEKAGVEWLHIDVMDGDFVPSISFGMPVIRSIRKESKMFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S+ + +I D G D IT H E+ + R++ I G K GV+I P TPV
Sbjct: 64 DVHLMVSAPERYIQDFVDCGADSITVHAEACEDLERAIELIRDAGVKVGVSIKPATPVND 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ +++++DM+LIMTV PGFGGQ+ + KI + K LI + + ++VDGG+ +
Sbjct: 124 ISHLLEDVDMVLIMTVQPGFGGQKYLPECTEKIEELKELIDREELDVDIQVDGGINDETM 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGE---ISYAKRLNDLK 217
+++++AGA+LLV GS FN E S K+++ +K
Sbjct: 184 ETVMKAGANLLVAGSYVFNGDLETNVYSIQKKMDKIK 220
>gi|51244647|ref|YP_064531.1| ribulose-phosphate 3-epimerase [Desulfotalea psychrophila LSv54]
gi|50875684|emb|CAG35524.1| probable ribulose-phosphate 3-epimerase [Desulfotalea psychrophila
LSv54]
Length = 228
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 140/219 (63%), Gaps = 5/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF+RLGEEI + +AGA+ IH DVMDG FVPNI+ G V+ + R +D
Sbjct: 3 SIKIAPSILSADFTRLGEEIEAVDRAGAEVIHIDVMDGHFVPNITIGPLVVEAARRVTDK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMIS D +++ AG D +T H E+ H+ R++ I +G K G +NP T +
Sbjct: 63 VLDVHLMISDADRYVDSFVKAGADWVTVHVETCTHLHRTVSRIKELGAKAGAVLNPATSL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
A L+ +++++D++++M+VNPGFGGQ I ST+ K Q I I +E+DGG+ +
Sbjct: 123 ASLDFILEDLDLVMLMSVNPGFGGQSFIPSTLEKSWQLHQRIQSLGLEIGIEIDGGINAA 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGA++ V GS+ + G Y++ + +LKK A
Sbjct: 183 TIADATEAGANIFVAGSAVY---GSSDYSETIAELKKLA 218
>gi|311029979|ref|ZP_07708069.1| ribulose-phosphate 3-epimerase [Bacillus sp. m3-13]
Length = 217
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 137/202 (67%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG++I ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFANLGKDILDVEQGGADYIHIDVMDGHFVPNITIGPLIVEAVRPITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DII+ H E+ H+ R+++ I + G K GV INP TPV
Sbjct: 62 LDVHLMIENPDAYIADFAKAGADIISVHVEACRHLHRTIQHIKSQGVKAGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+ +++++D++L+MTVNPGFGGQ I +PKI+Q +L +R SI +EVDGGV
Sbjct: 122 SIIPILNDVDLVLLMTVNPGFGGQAFIHDVLPKIKQVASLAEERGLSIDIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
K V AGA++LV GS+ +N++
Sbjct: 182 AKLCVDAGANVLVAGSAIYNKE 203
>gi|166368910|ref|YP_001661183.1| ribulose-phosphate 3-epimerase [Microcystis aeruginosa NIES-843]
gi|166091283|dbj|BAG05991.1| pentose-5-phosphate-3-epimerase [Microcystis aeruginosa NIES-843]
Length = 235
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 140/220 (63%), Gaps = 7/220 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI + PSIL+ADFS+LG +I + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 9 SIVVSPSILSADFSKLGADIEAVDKAGADWIHVDVMDGRFVPNITIGPLIVSAIRPYTKK 68
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP T
Sbjct: 69 PLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLCQIRELGKQAGVVLNPST 128
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++E V+ D++LIM+VNPGFGGQ I +PKI Q + + +R + +EVDGG+
Sbjct: 129 PLDLIEYVLHLCDLVLIMSVNPGFGGQSFIPEVVPKILQLRQMCDERGLDPWIEVDGGLK 188
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN YA + ++ S
Sbjct: 189 PANTWQVLEAGANAIVAGSAVFNAP---DYATAIEGIRNS 225
>gi|91215975|ref|ZP_01252944.1| ribulose-phosphate 3-epimerase [Psychroflexus torquis ATCC 700755]
gi|91185952|gb|EAS72326.1| ribulose-phosphate 3-epimerase [Psychroflexus torquis ATCC 700755]
Length = 220
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 128/197 (64%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L ++ + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 6 IAPSILAADFANLQRDVEMVNTSQADWFHIDIMDGVFVPNISFGMPVLKAISKHAKKFID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I AD G +++T H E+ H+ RSL++I G + GVA+NP T V +L
Sbjct: 66 VHLMIVDPDRYIKEFADLGSNMLTVHYEACSHLHRSLQSIKNHGMQAGVALNPHTNVELL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
D I++IDM+ +M+VNPGFGGQ IE T KI+Q KALI + +E+DGGVT +N +
Sbjct: 126 RDCINDIDMVCLMSVNPGFGGQHFIERTYKKIKQLKALILEEGADTKIEIDGGVTDKNAE 185
Query: 185 SLVQAGADLLVVGSSFF 201
L+ GAD+LV GS F
Sbjct: 186 ELIACGADVLVAGSYVF 202
>gi|189346012|ref|YP_001942541.1| Ribulose-phosphate 3-epimerase [Chlorobium limicola DSM 245]
gi|189340159|gb|ACD89562.1| Ribulose-phosphate 3-epimerase [Chlorobium limicola DSM 245]
Length = 221
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 144/217 (66%), Gaps = 2/217 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S + PSIL+ADF+ L I+ KAGA +H DVMDG FVPNISFG +++++ + +D+
Sbjct: 5 STLLAPSILSADFTELRSSIALADKAGADWMHCDVMDGVFVPNISFGPFIVQAVAACTDT 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ D HLMI+ D I AG IT H E+ PH+ R+++ I ++G K GV+INP TPV
Sbjct: 65 IIDTHLMITDPDRFIADFIKAGSHQITVHQEACPHLHRTIQYIKSLGAKAGVSINPATPV 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
++LE ++ ++D++L+M+VNPGFGGQ+ I S++ KI + + + + + + VDGGVT
Sbjct: 125 SVLESILPDLDLVLLMSVNPGFGGQKFIPSSLEKIAKLNVMRQEMNPQMVIAVDGGVTEE 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +S+V+AGAD L+ G++FF ++ A ++ +
Sbjct: 185 NAESVVKAGADSLIAGTAFFKAADPVATAAKIKAFAR 221
>gi|258511310|ref|YP_003184744.1| ribulose-phosphate 3-epimerase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478036|gb|ACV58355.1| ribulose-phosphate 3-epimerase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 217
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL++DF+RL +E+ + +AG IH DVMDG FVPN++ G ++++LR + + FD
Sbjct: 2 IAPSILSSDFARLRDEVDEVIRAGCDWIHIDVMDGHFVPNLTLGPPIVKALRRHVQATFD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ S + I DAG DI+T H E++PH+ R+L+ I GK+ G+A+NP T L
Sbjct: 62 VHLMVESPEHWIPAFVDAGADILTVHYEATPHVHRALQMIRESGKRAGLALNPGTSPDGL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
++ ++D++L+MTVNPGFGGQ L+ ST+ K+ + + ++ G++ + +EVDGG+ + I
Sbjct: 122 SYLLADVDLVLVMTVNPGFGGQSLVPSTLAKVAEVRRMLDEAGRQDVHVEVDGGIHAGTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ F++
Sbjct: 182 RQARDAGADVFVAGSAVFDE 201
>gi|319745736|gb|EFV98033.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae ATCC
13813]
Length = 220
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 126/198 (63%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +I A AG DI+T H E++ HI +L+ I G K GV INP TPV
Sbjct: 65 DCHLMVVDPERYIEAFAQAGADIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L ++D +D ILIMTVNPGFGGQ I + K++ A + +EVDGG+ + I
Sbjct: 125 LIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHYYDIEVDGGIDNTTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ +AGA++ V GS F
Sbjct: 185 KAAAEAGANVFVAGSYLF 202
>gi|22537915|ref|NP_688766.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 2603V/R]
gi|76798253|ref|ZP_00780502.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 18RS21]
gi|77409022|ref|ZP_00785741.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae COH1]
gi|22534813|gb|AAN00639.1|AE014272_10 ribulose-phosphate 3-epimerase [Streptococcus agalactiae 2603V/R]
gi|76586406|gb|EAO62915.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 18RS21]
gi|77172363|gb|EAO75513.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae COH1]
Length = 220
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 126/198 (63%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +I A AG DI+T H E++ HI +L+ I G K GV INP TPV
Sbjct: 65 DCHLMVVDPERYIEAFAQAGADIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L ++D +D ILIMTVNPGFGGQ I + K++ A + +EVDGG+ + I
Sbjct: 125 LIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ +AGA++ V GS F
Sbjct: 185 KAAAEAGANVFVAGSYLF 202
>gi|319946188|ref|ZP_08020428.1| ribulose-phosphate 3-epimerase [Streptococcus australis ATCC
700641]
gi|319747570|gb|EFV99823.1| ribulose-phosphate 3-epimerase [Streptococcus australis ATCC
700641]
Length = 219
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 132/199 (66%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+AD++ E+ + +GA+ H DVMDG FVPNISFGA V+ S+R +S VF
Sbjct: 5 KLAPSILSADYANFESELKKLEASGAEYAHIDVMDGHFVPNISFGAGVVASMRPHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + HI A AG DII+ H E++PHI +L+ I G K V INP TPV
Sbjct: 65 DCHLMVTNPEQHIEEFARAGADIISIHVEATPHIHGALQKIRLAGVKPSVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ +++ +D +L+MTVNPGFGGQ + T+ KIRQ L ++ + +EVDGG+ + I
Sbjct: 125 IQHILNLVDQVLVMTVNPGFGGQAFLPETMDKIRQLVQLREEKGLDFDIEVDGGIDDKTI 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGA++ V GS FN
Sbjct: 185 HAAKEAGANVFVAGSYVFN 203
>gi|307727442|ref|YP_003910655.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1003]
gi|307587967|gb|ADN61364.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1003]
Length = 288
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 142/217 (65%), Gaps = 9/217 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+RL +EI ++T AGA IH DVMD +VPN++ G V ++R ++ D
Sbjct: 6 IAPSLLSADFARLADEIRDVTAAGADWIHLDVMDNHYVPNLTVGPLVCAAIRPHTRVPID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM +D + A+AG + I+FHPE+S H+ R++ I + G + G+A+NP TP+A+L
Sbjct: 66 VHLMTMPVDPLVIAFAEAGANTISFHPEASLHVHRTIELIRSHGARVGLALNPATPLAVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ VI+ +D++L+M+VNPGFGGQ I T+ K+R + + R++ +EVDGGV +
Sbjct: 126 DHVIERLDVVLLMSVNPGFGGQAFIPETLAKLRALRERVDATMQRTGRALLIEVDGGVKA 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F G YA+ +++++
Sbjct: 186 SNIAEIAAAGADVFVAGSAVF---GAHDYAQAIDEMR 219
>gi|224004198|ref|XP_002295750.1| ribulose-phosphate 3-epimerase, phosphoribulose epimerase,
erythrose-4-phosphate isomerase, phosphoketopentose
3-epimerase, xylulose phosphate 3-epimerase,
phosphoketopentose epimerase, ribulose 5-phosphate
3-epimerase, D-ribulose phosphate-3-epimerase,
D-ribulose 5-phosphate epimerase, D-ribulose-5-P
3-epimerase, D-xylulose-5-phosphate 3-epimerase,
pentose-5-phosphate 3-epimerase [Thalassiosira
pseudonana CCMP1335]
gi|209585782|gb|ACI64467.1| ribulose-phosphate 3-epimerase, phosphoribulose epimerase,
erythrose-4-phosphate isomerase, phosphoketopentose
3-epimerase, xylulose phosphate 3-epimerase,
phosphoketopentose epimerase, ribulose 5-phosphate
3-epimerase, D-ribulose phosphate-3-epimerase,
D-ribulose 5-phosphate epimerase, D-ribulose-5-P
3-epimerase, D-xylulose-5-phosphate 3-epimerase,
pentose-5-phosphate 3-epimerase [Thalassiosira
pseudonana CCMP1335]
Length = 233
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 142/215 (66%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N+ KAGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 10 IAPSILSADFARLGEEVENVLKAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +DS I AG ITFHPE++ HI RSL+ I G K G+ NP TP+
Sbjct: 70 DVHLMVSPVDSLITDFIAAGASHITFHPEATNHIDRSLQLIKNGGCKAGLVFNPATPLDA 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ V+D++D+IL+M+VNPGFGGQ I +T+ K R+A+ +I + I L +DGGV NI
Sbjct: 130 AKYVMDKLDIILLMSVNPGFGGQAFIPATLDKAREARKMIDEAGIDCRLMIDGGVKIDNI 189
Query: 184 KSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLK 217
+ + +AG D++V GS+ F N + SY ++ ++
Sbjct: 190 REVAEAGVDMMVAGSAIFKNPRTVDSYKSTIDAMR 224
>gi|86160387|ref|YP_467172.1| ribulose-5-phosphate 3-epimerase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776898|gb|ABC83735.1| ribulose-5-phosphate 3-epimerase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 224
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 140/222 (63%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL+ADF RL EE+ + AGA IH DVMDG FVPNI+ G V+ ++R
Sbjct: 1 MALPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + ++ A AG D+++ H E SPH+ R+L+ I A G + VA+NP
Sbjct: 61 TRLPVDAHLMIVEPEKYVEAFAKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T ++ +E V+ + +M+L+MTVNPGFGGQ+ IE+ K+R+ +A+ R ++L EVDGGV
Sbjct: 121 TDLSAIEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRRLRAMADARGLALEIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV G++ F G Y + ++ L+ +A
Sbjct: 181 KPETAGKVAAAGANVLVAGTAVF---GAPDYRQAISSLRAAA 219
>gi|238019370|ref|ZP_04599796.1| hypothetical protein VEIDISOL_01234 [Veillonella dispar ATCC 17748]
gi|237864069|gb|EEP65359.1| hypothetical protein VEIDISOL_01234 [Veillonella dispar ATCC 17748]
Length = 216
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EEI +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFATLSEEIKSIELAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTQLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GV++NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVSLNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I + I K++QAK L + + +EVDGG+
Sbjct: 122 LLEDVAADLDMILIMSVNPGFGGQSFIPNAIKKVKQAKMLLEEVDNTTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFF 201
+ +AGA +LV GS+ F
Sbjct: 182 TCVPIKRAGATILVAGSAVF 201
>gi|218442157|ref|YP_002380486.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7424]
gi|218174885|gb|ACK73618.1| Ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7424]
Length = 235
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I I PSIL+ADFSRLGEEI + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 7 TKPIVISPSILSADFSRLGEEIQAVDKAGADWIHVDVMDGRFVPNITIGPLIVEAIRPYT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I GK+ GV +NP
Sbjct: 67 KKPLDVHLMIVEPEKYVPDFAKAGADIISVHAEHNASPHLHRTLGQIREFGKQAGVVLNP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I + KI++ + + ++ + +EVDGG
Sbjct: 127 STPLELIEYVLELCDLVLIMSVNPGFGGQSFIPEVVSKIQKLRQMCDEKGLDPWIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F Y+K + ++ S
Sbjct: 187 LKPDNTWQVLEAGANAIVAGSAVFKAA---DYSKAIEGIRHS 225
>gi|306824466|ref|ZP_07457812.1| ribulose-phosphate 3-epimerase [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304433253|gb|EFM36223.1| ribulose-phosphate 3-epimerase [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 239
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ A+ ++ ++ +EVDGG+ + I
Sbjct: 146 VKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVAIRQEKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 237
>gi|76788542|ref|YP_330395.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae A909]
gi|77406267|ref|ZP_00783334.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae H36B]
gi|77412122|ref|ZP_00788446.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae CJB111]
gi|76563599|gb|ABA46183.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae A909]
gi|77161829|gb|EAO72816.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae CJB111]
gi|77175120|gb|EAO77922.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae H36B]
Length = 220
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 126/198 (63%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +I A AG DI+T H E++ HI +L+ I G K GV INP TPV
Sbjct: 65 DCHLMVVDPERYIEAFAQAGTDIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L ++D +D ILIMTVNPGFGGQ I + K++ A + +EVDGG+ + I
Sbjct: 125 LIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ +AGA++ V GS F
Sbjct: 185 KAAAEAGANVFVAGSYLF 202
>gi|78212783|ref|YP_381562.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9605]
gi|78197242|gb|ABB35007.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9605]
Length = 227
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 140/221 (63%), Gaps = 5/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFARLGEEVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKKAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IE+ + KIR + + ++ + +EVDGG+
Sbjct: 123 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKIRDLRRMCDEKGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ N +++AGA+ +V GS FNQ YA+ + ++ S+
Sbjct: 183 AGNAWKVIEAGANAIVSGSGVFNQP---DYAEAIKGIRNSS 220
>gi|317153913|ref|YP_004121961.1| ribulose-phosphate 3-epimerase [Desulfovibrio aespoeensis Aspo-2]
gi|316944164|gb|ADU63215.1| ribulose-phosphate 3-epimerase [Desulfovibrio aespoeensis Aspo-2]
Length = 216
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 129/197 (65%), Gaps = 2/197 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L++DF+ L E++ + +AG +H DVMDG FVPNI+FG +I+++R+ SD FDCH
Sbjct: 5 PSMLSSDFANLQSELAALKQAGLTWVHLDVMDGMFVPNITFGPPIIKAMRARSDLFFDCH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +I ADAG D+I H E+ H+ R I G K VA+NP TP+ +L
Sbjct: 65 LMIREPGRYIRDFADAGADLICVHAEACDHLERVCAQIAETGAKPAVALNPHTPLDVLRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKSL 186
+I ++ M+LIM+VNPGFGGQ+ I + K+R+ K +I ++VDGGVT N + L
Sbjct: 125 LIPQLSMVLIMSVNPGFGGQKFIPFCMDKVRELKGMITAAGSGTLIQVDGGVTLDNAREL 184
Query: 187 VQAGADLLVVGSSFFNQ 203
V+AGAD+LV GS+FF
Sbjct: 185 VEAGADVLVSGSAFFGH 201
>gi|332705968|ref|ZP_08426041.1| ribulose-5-phosphate 3-epimerase [Lyngbya majuscula 3L]
gi|332355228|gb|EGJ34695.1| ribulose-5-phosphate 3-epimerase [Lyngbya majuscula 3L]
Length = 235
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 142/217 (65%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRLGEEI + AGA IH DVMDG FVPNI+ G V++++R + D
Sbjct: 12 ISPSILSADFSRLGEEIKAVDAAGADWIHVDVMDGRFVPNITIGPLVVKAIRPITQKPLD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI + ++ A+AG DII+ H E +SPH+ R+L I +GK+ GV +NP + +
Sbjct: 72 VHLMIVEPEKYVADFAEAGADIISVHAEHNASPHLHRTLCQIRELGKQAGVVLNPSSSLD 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E V++ D+ILIM+VNPGFGGQ I +PKIR+ + + +R +S +EVDGG+ N
Sbjct: 132 LIEYVLEVCDLILIMSVNPGFGGQSFITEVVPKIRKLRQMCDERGLSPWIEVDGGLKVNN 191
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+++AGA+ +V GS+ F YA+ ++ ++ S
Sbjct: 192 TWQVLEAGANAIVAGSAVFKAP---DYAEAISGIRNS 225
>gi|119776494|ref|YP_929234.1| ribulose-phosphate 3-epimerase [Shewanella amazonensis SB2B]
gi|119768994|gb|ABM01565.1| ribulose-5-phosphate 3-epimerase [Shewanella amazonensis SB2B]
Length = 230
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 4/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 7 MRPYL-IAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 65
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 66 GITADIDVHLMVKPVDRIIPDFAKAGASIITFHPEASEHVDRTLQLIRDHGCKAGLVFNP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++Q + I I LEVDGG
Sbjct: 126 ATPLHYLDYVMDKLDVILLMSVNPGFGGQSFIPATLDKLKQVRGRIDASGYDIRLEVDGG 185
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
V NI + AGAD+ V GS+ F + + R+
Sbjct: 186 VKEDNIAEIAAAGADMFVAGSAIFGKPDYKAVVDRM 221
>gi|307709724|ref|ZP_07646175.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK564]
gi|307619426|gb|EFN98551.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK564]
Length = 218
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKLLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 ALAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|148655912|ref|YP_001276117.1| ribulose-phosphate 3-epimerase [Roseiflexus sp. RS-1]
gi|148568022|gb|ABQ90167.1| ribulose-5-phosphate 3-epimerase [Roseiflexus sp. RS-1]
Length = 230
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 134/204 (65%), Gaps = 3/204 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+++PSILAADF+RLGE+ + AGA +H DVMDG FVPNIS G V+ +LR D
Sbjct: 10 SIRLMPSILAADFARLGEQAREVAAAGADGLHIDVMDGMFVPNISIGIPVVDALRRTVDL 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + +I+ AG IT H E+ H+ R+++ IHA+G GVA+NP TP+
Sbjct: 70 PLDCHLMIVEPERYIDAFVAAGATHITVHVEACRHLHRTIQQIHALGVTAGVALNPATPL 129
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTS 180
+E+++ ++D++LIM+VNPGFGGQ I + KI + + ++ G I L+VDGG+++
Sbjct: 130 TAIEEILPDLDLVLIMSVNPGFGGQTYIPGSTAKIVRLRRMLDEHGLHHIELQVDGGISA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
N+ + AGA +V G+ FN +
Sbjct: 190 ANVADVAGAGATSIVAGTGVFNTR 213
>gi|255590629|ref|XP_002535323.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
gi|223523461|gb|EEF27061.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
Length = 228
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 136/204 (66%), Gaps = 4/204 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V +++R +
Sbjct: 3 TYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCQAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG DIITFHPE+S HI R+L+ I G K G+ NP TP+
Sbjct: 63 PIDVHLMVKPVDRIIPDFAKAGADIITFHPEASEHIDRTLQLIRDNGCKAGLVFNPGTPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRS-ISLEVDGGVT 179
LE V+D+IDM+LIM+VNPGFGGQ I + KI A+ +I G+ S I LEVDGG+
Sbjct: 123 HYLEHVMDKIDMVLIMSVNPGFGGQSFIPEALKKIALARRMIDQSGRGSDIMLEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
+ NI + +AGAD V GS+ F +
Sbjct: 183 ADNIAAAAEAGADTFVAGSAIFGK 206
>gi|268317601|ref|YP_003291320.1| ribulose-phosphate 3-epimerase [Rhodothermus marinus DSM 4252]
gi|262335135|gb|ACY48932.1| ribulose-phosphate 3-epimerase [Rhodothermus marinus DSM 4252]
Length = 224
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 139/208 (66%), Gaps = 7/208 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD---S 63
+ PSIL+ADF+RLGE+ +AGA IH DVMDG FVPNI+ G V+ +LR +D +
Sbjct: 4 LAPSILSADFARLGEQCREALEAGADWIHIDVMDGHFVPNITMGPLVVEALRPLADELGA 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLM+ + + A AG D +T H E++PH+ R+L I +GKK GVA+NP TP+
Sbjct: 64 VLDVHLMVERPERFLEDFARAGADNLTVHVEATPHLHRALDEIRRLGKKVGVALNPATPL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTS 180
+ LE+V+ +D+IL+MTV+PGFGGQ I S+ K+++ + L IG + +EVDGG+
Sbjct: 124 SALEEVLPLVDLILVMTVDPGFGGQDYIPSSTLKVQRLRRLLNAIGSHA-YIEVDGGIYP 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEIS 208
N+ +V+AGA ++V GS+ FN+ ++
Sbjct: 183 HNVAEVVRAGATVIVAGSAIFNRHAPVA 210
>gi|167768982|ref|ZP_02441035.1| hypothetical protein ANACOL_00303 [Anaerotruncus colihominis DSM
17241]
gi|167668622|gb|EDS12752.1| hypothetical protein ANACOL_00303 [Anaerotruncus colihominis DSM
17241]
Length = 221
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 137/218 (62%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILA DF+ LG E++ + AGA IH DVMDG FVPNIS G V+ SLR +D+V
Sbjct: 4 MKIAPSILACDFAALGAEVAAMHNAGADLIHVDVMDGHFVPNISLGLPVVASLRKATDAV 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMIS ++ D G DI+ FH ES + + I A GKK G++I P+TP
Sbjct: 64 LDVHLMISDPLTYAPQFCDKGADIVVFHAESDSEPQAVIDAIRAKGKKCGISIKPKTPAD 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +D++DM+L+MTV PGFGGQ+ +E PKI + +R +S +EVDGG+ +
Sbjct: 124 VVFPYLDQLDMVLVMTVEPGFGGQKFMEDMCPKIEAVRRECDRRGLSTDIEVDGGIDLKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I V+AGA++ V GS+ F G+ YA + DL+ +A
Sbjct: 184 IGKTVRAGANVFVAGSALF---GKPDYAAAVRDLRAAA 218
>gi|225857556|ref|YP_002739067.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae P1031]
gi|225726253|gb|ACO22105.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae P1031]
Length = 218
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFVRAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQSKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|309790712|ref|ZP_07685262.1| ribulose-phosphate 3-epimerase [Oscillochloris trichoides DG6]
gi|308227243|gb|EFO80921.1| ribulose-phosphate 3-epimerase [Oscillochloris trichoides DG6]
Length = 222
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 139/203 (68%), Gaps = 6/203 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS- 63
+ I PSIL ADF+ +G+E++ I AG + +H DVMDG FVPNISFG +IRSLR ++
Sbjct: 1 MHIAPSILTADFAHMGDELTAIFDAGIRWLHLDVMDGRFVPNISFGPMLIRSLRPIAEQY 60
Query: 64 --VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLMI+ D ++ A AGC+ IT H E+ H+ R+++ I A+GKK GVA+NP T
Sbjct: 61 GVVLDAHLMIADPDRYVEEFAAAGCEYITVHAEACTHLHRTVQHIRALGKKPGVALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGV 178
P++ +E+V+ ++ + LIM+VNPGFGGQ+ I ++I KIR+ + ++ +R ++ L++DGGV
Sbjct: 121 PLSAIEEVLPDLSLALIMSVNPGFGGQRFIPASIDKIRRLRTMLDERGLNDVVLQIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFF 201
I ++ AGA V GS+ +
Sbjct: 181 NKDLIAAVRDAGATCAVTGSAVY 203
>gi|58584494|ref|YP_198067.1| Pentose-5-phosphate-3-epimerase [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58418810|gb|AAW70825.1| Pentose-5-phosphate-3-epimerase [Wolbachia endosymbiont strain TRS
of Brugia malayi]
Length = 226
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 139/227 (61%), Gaps = 13/227 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+A+F++LGEE+ I G IH DVMDG FVPNI+ G VI ++R Y++
Sbjct: 3 IKIAPSILSANFAKLGEEVKRINNLGVDYIHIDVMDGNFVPNITIGPGVISTIRKYTNLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK--------KTGVA 116
FD HLMI S H+ +AG DIIT H E+ H+ R +R I + + GV+
Sbjct: 63 FDVHLMIKSPGDHVESFINAGADIITIHAEAEVHLERLIRKIKSYKNVNDAKKKVQVGVS 122
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEV 174
I P T I E +I E+D++LIMTVNPGFGGQ+ I S + KI K +I +R + + V
Sbjct: 123 IVPSTSPGIFEYIIHELDIVLIMTVNPGFGGQEFIYSQLGKISVVKKMIRERGLKTQISV 182
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
DGGV+ N +++AGAD+LV GS+ F K + K +ND K +L
Sbjct: 183 DGGVSLSNAADIIKAGADILVAGSAIFRAK---NMKKAVNDFKNLSL 226
>gi|94268026|ref|ZP_01291064.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
gi|94270382|ref|ZP_01291727.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
gi|93450824|gb|EAT01859.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
gi|93451764|gb|EAT02526.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
Length = 225
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 141/219 (64%), Gaps = 5/219 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGEEI + AGA IH DVMDG FVPN++ G V+ + R ++
Sbjct: 10 RLAPSILSADFARLGEEIRAVEAAGADIIHVDVMDGHFVPNLTIGPPVVAAARRVTELPL 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + ++ A AG D IT H E+ H+ R++ I +GK+ G+ +NP T +A
Sbjct: 70 DVHLMMVNPQDYVEDFARAGADWITIHVETGYHLHRTIHRIKELGKRAGLVLNPGTSLAS 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ ++ E+D++++M+VNPGFGGQ I S + KIRQ + +I +R + +E+DGGVT I
Sbjct: 130 LDYLLAEVDLVMLMSVNPGFGGQSFIPSALAKIRQLRQMIDQRGLKVEIEIDGGVTPATI 189
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AG D+ V GS+ F G YA + +L++ ALA
Sbjct: 190 GEIYRAGTDICVAGSAVF---GRDDYAGAITELRQQALA 225
>gi|167037723|ref|YP_001665301.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167040384|ref|YP_001663369.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X514]
gi|256752278|ref|ZP_05493141.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914468|ref|ZP_07131784.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X561]
gi|307724296|ref|YP_003904047.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X513]
gi|320116138|ref|YP_004186297.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166854624|gb|ABY93033.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X514]
gi|166856557|gb|ABY94965.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|256748846|gb|EEU61887.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889403|gb|EFK84549.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X561]
gi|307581357|gb|ADN54756.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X513]
gi|319929229|gb|ADV79914.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 216
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 138/200 (69%), Gaps = 5/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F+ L E+I I K A +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKIAPSILSANFANLLEDIKKIEK-DADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I A++G DIIT H E+ H+ R+++ I GKK GV++NP TP+
Sbjct: 60 FDVHLMIENPDLYIEEFANSGADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
L+ ++ ++DMILIMTVNPGFGGQ+ I+S + KI + K + +G + +EVDGG+
Sbjct: 120 TLKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMREDLG-LNFEIEVDGGINLY 178
Query: 182 NIKSLVQAGADLLVVGSSFF 201
N+K +V+AGAD++V GS+ F
Sbjct: 179 NVKEVVEAGADIIVAGSAIF 198
>gi|224500399|ref|ZP_03668748.1| hypothetical protein LmonF1_12324 [Listeria monocytogenes Finland
1988]
Length = 216
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 137/217 (63%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F +G+I L L K L
Sbjct: 183 CTLAGADLIVVGSYLF--EGDIE--ANLEKLSKGVLT 215
>gi|284800780|ref|YP_003412645.1| hypothetical protein LM5578_0528 [Listeria monocytogenes 08-5578]
gi|284993966|ref|YP_003415734.1| hypothetical protein LM5923_0527 [Listeria monocytogenes 08-5923]
gi|284056342|gb|ADB67283.1| hypothetical protein LM5578_0528 [Listeria monocytogenes 08-5578]
gi|284059433|gb|ADB70372.1| hypothetical protein LM5923_0527 [Listeria monocytogenes 08-5923]
Length = 216
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 137/217 (63%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F +G+I L L K L
Sbjct: 183 CTLAGADLIVVGSYLF--EGDIE--ANLEKLAKGVLT 215
>gi|218290483|ref|ZP_03494603.1| Ribulose-phosphate 3-epimerase [Alicyclobacillus acidocaldarius
LAA1]
gi|218239504|gb|EED06699.1| Ribulose-phosphate 3-epimerase [Alicyclobacillus acidocaldarius
LAA1]
Length = 217
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL++DF+RL +E+ + +AG IH DVMDG FVPN++ G ++++LR + + FD
Sbjct: 2 IAPSILSSDFARLRDEVDEVIRAGCDWIHIDVMDGHFVPNLTLGPPIVKALRRHVQATFD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ S + I DAG DI+T H E++PH+ R+L+ I G+K G+A+NP T L
Sbjct: 62 VHLMVESPERWIPAFVDAGADILTVHYEATPHVHRALQMIRESGRKAGLALNPGTSPDGL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
++ ++D++L+MTVNPG+GGQ L+ ST+ K+ + + ++ G++ + +EVDGG+ + I
Sbjct: 122 SYLLADVDLVLVMTVNPGYGGQSLVPSTLAKVAEVRRMLDDAGRQDVHVEVDGGIHAGTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ F++
Sbjct: 182 RQARDAGADVFVAGSAVFDE 201
>gi|161621820|ref|YP_171630.2| ribulose-phosphate 3-epimerase [Synechococcus elongatus PCC 6301]
Length = 222
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMI 71
L+ADFSRLG+++ + +AGA IH DVMDG FVPNI+ G ++ +LR + D HLMI
Sbjct: 8 LSADFSRLGDDVRAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTQKPLDVHLMI 67
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+ ++ A AG DII+ E+ PH+ R+L I +GK+ GV +NP TPV LE V++
Sbjct: 68 VEPEKYVPDFAKAGADIISVQAEACPHLHRNLAQIKDLGKQAGVVLNPSTPVETLEYVLE 127
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQA 189
D+ILIM+VNPGFGGQ I + +PKIR+ +A+ +R + +EVDGG+ + N +++A
Sbjct: 128 LCDLILIMSVNPGFGGQSFIPAVLPKIRKLRAMCDERGLDPWIEVDGGLKANNTWQVLEA 187
Query: 190 GADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GA+ +V GS+ FN YA+ + ++ S
Sbjct: 188 GANAIVAGSAVFNAP---DYAEAIAAIRNS 214
>gi|170696276|ref|ZP_02887408.1| Ribulose-phosphate 3-epimerase [Burkholderia graminis C4D1M]
gi|170138836|gb|EDT07032.1| Ribulose-phosphate 3-epimerase [Burkholderia graminis C4D1M]
Length = 238
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/225 (44%), Positives = 136/225 (60%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 14 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVGV 73
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP T +
Sbjct: 74 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATSL 133
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEVDGG
Sbjct: 134 NYLDHVMDKLDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYKERTGRDIHLEVDGG 193
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD V GS+ F Q K + D ++ALA
Sbjct: 194 VKVDNIAEIAAAGADTFVAGSAIFGQPDH----KVVIDKMRAALA 234
>gi|163854627|ref|YP_001628925.1| ribulose-phosphate 3-epimerase [Bordetella petrii DSM 12804]
gi|163258355|emb|CAP40654.1| Ribulose-phosphate 3-epimerase [Bordetella petrii]
Length = 243
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 137/220 (62%), Gaps = 9/220 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 16 ATRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPHVQV 75
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG DIITFHP++S H+ R+L I G K G+ NP + +
Sbjct: 76 PIDVHLMVEPVDELVPQFAKAGADIITFHPDASRHVHRTLSLIRDHGCKAGLVFNPASSL 135
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
++ V++ +D++L+M+VNPGFGGQ I +T+ K+R A+A I G + I LEVDGG
Sbjct: 136 DAMDHVMNLLDVVLLMSVNPGFGGQSFIPATLHKLRDARARIDRWMQAGGQPILLEVDGG 195
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD V GS+ F G YA + L+
Sbjct: 196 VKVDNIAQIRAAGADTFVAGSAIF---GHPDYAAVIQSLR 232
>gi|303248515|ref|ZP_07334773.1| ribulose-phosphate 3-epimerase [Desulfovibrio fructosovorans JJ]
gi|302490135|gb|EFL50055.1| ribulose-phosphate 3-epimerase [Desulfovibrio fructosovorans JJ]
Length = 224
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 141/214 (65%), Gaps = 5/214 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L++DF RL +E++ + AG + +H DVMDG FVPNI+FG +I ++R S FD H
Sbjct: 9 PSLLSSDFGRLADELAALEGAGLRWVHLDVMDGLFVPNITFGPPIIAAMRRRSKLYFDTH 68
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI + ++ +AG D+I H E++ H+ R++ I +G GVA+NP TP++ +E
Sbjct: 69 LMIERPERYLAAFREAGSDLICVHAEATVHLERAVSEIRRLGAAPGVALNPATPLSQVEY 128
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
++ +++M+L+MTVNPGFGGQ I + K++ A+ +R +S ++VDGGV+ N +L
Sbjct: 129 LLPQLEMVLVMTVNPGFGGQSFIPFCLDKVKDLAAMRRERDLSFRIQVDGGVSPDNTAAL 188
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V AGAD+LV GS+FF G Y +RL+ + +A
Sbjct: 189 VAAGADVLVSGSAFF---GHPPYKERLDVFQAAA 219
>gi|295698877|ref|YP_003606770.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1002]
gi|295438090|gb|ADG17259.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1002]
Length = 235
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+RL +EI ++T AGA IH DVMD +VPN++ G V ++R Y+ FD
Sbjct: 6 IAPSLLSADFARLADEIRDVTVAGADWIHLDVMDNHYVPNLTVGPLVCSAIRPYTSLPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM + +D ++ A+AG ++I+FHPE++ H+ R++ I + G + G+A+NP TP+ +L
Sbjct: 66 VHLMTTPVDPLVSAFAEAGANLISFHPEATLHVHRTIELIRSHGARAGLALNPATPLTVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ V++ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVDGGV +
Sbjct: 126 DHVLEMLDVVLVMSVNPGFGGQAFITETLDKLRLLRERVETTMQRTGRPLLIEVDGGVKA 185
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
NI + AGAD+ V GS+ F
Sbjct: 186 SNIARVATAGADVFVAGSAVF 206
>gi|194333334|ref|YP_002015194.1| Ribulose-phosphate 3-epimerase [Prosthecochloris aestuarii DSM 271]
gi|194311152|gb|ACF45547.1| Ribulose-phosphate 3-epimerase [Prosthecochloris aestuarii DSM 271]
Length = 221
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF++LG I KAGA +H DVMDG FVPNI+FG +I+++ S D
Sbjct: 8 LAPSILSADFTQLGNSIQLAEKAGADWLHCDVMDGHFVPNITFGPFIIQAIAKCSSMTID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D +I AG +T H E+ PH+ RS++ I ++G K GV+INP TP++ L
Sbjct: 68 THLMISDPDRYIPDFIKAGSHQVTVHQETCPHLHRSVQLIKSLGAKAGVSINPGTPISTL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E +I E+DM+L+M+VNPGFGGQ+ I S++ KI++ + + + + VDGGVT N +
Sbjct: 128 EAIIGELDMVLLMSVNPGFGGQKFIPSSVEKIKKLHEMRNAMNPDMVIAVDGGVTVDNAQ 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
LV AGAD L+ G++FF + A ++
Sbjct: 188 ELVSAGADALIAGTAFFKAENPAEAAAQI 216
>gi|303228551|ref|ZP_07315379.1| ribulose-phosphate 3-epimerase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516798|gb|EFL58712.1| ribulose-phosphate 3-epimerase [Veillonella atypica
ACS-134-V-Col7a]
Length = 216
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+ADFS L +EI ++ AGA +H DVMDG FVPN++FG V++++R ++
Sbjct: 2 IKIAPSMLSADFSILRDEIKSVELAGADYLHIDVMDGHFVPNLTFGGPVVKAIRPHTALP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I + G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPADYVEEYAKIGVEYFTFHQETVPHMHRLIQQIKSAGMKAGVALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I I K++QAK L+ G +EVDGG+
Sbjct: 122 MLEDVAGDLDMILIMSVNPGFGGQSFIPRAIEKVKQAKLLLDSAGNNDAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFF 201
+ AGA +LV GS+ F
Sbjct: 182 TCIPIKDAGATMLVAGSAVF 201
>gi|302879897|ref|YP_003848461.1| ribulose-phosphate 3-epimerase [Gallionella capsiferriformans ES-2]
gi|302582686|gb|ADL56697.1| ribulose-phosphate 3-epimerase [Gallionella capsiferriformans ES-2]
Length = 226
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
QI PSIL+A+F++LGEE+ N+ AGA +HFDVMD +VPN++ G V +LR++ +
Sbjct: 3 QIAPSILSANFAKLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPLVCDALRAHGVTAP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG ITFHPE+S H+ R++ I G K G+ NP TP+
Sbjct: 63 IDVHLMVKPVDRIIPDFAKAGATFITFHPEASEHVDRTIGLIKESGCKAGLVFNPATPLD 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
ILE ++ ++DM+L+M+VNPGFGGQ+ I T+ K R+ +A+I G + LE+DGGV N
Sbjct: 123 ILEYMLPKLDMVLLMSVNPGFGGQKFIPYTLDKARKVRAMIDAGGYNCLLEIDGGVGPAN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I+ + AG D V GS+ FN +
Sbjct: 183 IREVAAAGVDTFVAGSAIFNAR 204
>gi|227431993|ref|ZP_03914013.1| ribulose-5-phosphate 3-epimerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352278|gb|EEJ42484.1| ribulose-5-phosphate 3-epimerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 218
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+AD++ L ++ + AGA+ +H DVMDG FVP IS+G + ++ LR +D V D
Sbjct: 5 IAPSILSADYTNLERDVKLVEAAGAEYLHIDVMDGTFVPAISYGPNWVKQLRPETDLVLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + + ADAG DII H E++PHI R+L+ I G K V INP TPV+ +
Sbjct: 65 VHLMIQNPERFVEEFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVSAI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E V+D +D +L+MTVNPGFGGQ+ + ST+ KI Q + +R +E+DGGV + IK
Sbjct: 125 EAVLDMVDQVLVMTVNPGFGGQKFLPSTLQKIEQLQTFREERGFDFDIEIDGGVNNETIK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
S AGA++ V GS +++ + L DL K
Sbjct: 185 SAYDAGANVFVAGSYVYDKVDPAAKIGILKDLIK 218
>gi|326389537|ref|ZP_08211104.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter ethanolicus JW
200]
gi|325994542|gb|EGD52967.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter ethanolicus JW
200]
Length = 216
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 139/201 (69%), Gaps = 5/201 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F+ L E++ I K A +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKIAPSILSANFANLLEDVKKIEK-DADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I A++G DIIT H E+ H+ R+++ I GKK GV++NP TP+
Sbjct: 60 FDVHLMIENPDLYIEEFANSGADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
L+ ++ ++DMILIMTVNPGFGGQ+ I+S + KI + K + +G + +EVDGG+
Sbjct: 120 TLKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMREDLG-LNFEIEVDGGINLY 178
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
N+K +V+AGAD++V GS+ F+
Sbjct: 179 NVKEVVEAGADIIVAGSAIFD 199
>gi|222151055|ref|YP_002560209.1| ribulose-5-phosphate 3-epimerase [Macrococcus caseolyticus
JCSC5402]
gi|222120178|dbj|BAH17513.1| ribulose-5-phosphate 3-epimerase [Macrococcus caseolyticus
JCSC5402]
Length = 216
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 130/202 (64%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ +F L EE++ + AGA +HFDVMDG FVPNISF V++ +RS +D
Sbjct: 1 MKVAPSLLSCNFLELKEEVAALHAAGADYLHFDVMDGQFVPNISFAFPVLQQIRSITDLT 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I ADAG DIIT H ES+ HI R+L+ I GKK G+ +NP TPVA
Sbjct: 61 IDTHLMIQDPERYIQAFADAGSDIITVHVESTKHIHRALQMIRNAGKKAGITLNPGTPVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+D +D++L+MTVNPGFGGQ I+S + KIR + +S +EVDGGV
Sbjct: 121 SIIPVLDMVDLVLVMTVNPGFGGQSFIKSGVDKIRFLNEYRNEYDLSYEIEVDGGVNEDT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
AGAD+LV GS FF +
Sbjct: 181 AILCKAAGADVLVAGSYFFKHE 202
>gi|300702926|ref|YP_003744527.1| d-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum
CFBP2957]
gi|299070588|emb|CBJ41883.1| D-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum
CFBP2957]
Length = 242
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 130/211 (61%), Gaps = 11/211 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++ G V ++R ++
Sbjct: 9 GFRIAPSILSADFARLGEEVRRVIEAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHAQR 68
Query: 64 -----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ N
Sbjct: 69 DGKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFN 128
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR------QAKALIGKRSISL 172
P TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R A A R I L
Sbjct: 129 PATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALTKLRAVRQKLDAYAERTGRRILL 188
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
E+DGGV + NI + +AGAD V GS+ F +
Sbjct: 189 EIDGGVKADNIAEIARAGADTFVAGSAVFGK 219
>gi|289167170|ref|YP_003445437.1| pentose-5-phosphate-3-epimerase [Streptococcus mitis B6]
gi|288906735|emb|CBJ21569.1| pentose-5-phosphate-3-epimerase [Streptococcus mitis B6]
Length = 218
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++ HI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATNHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 216
>gi|172035714|ref|YP_001802215.1| ribulose-phosphate 3-epimerase [Cyanothece sp. ATCC 51142]
gi|171697168|gb|ACB50149.1| ribulose-phosphate 3-epimerase [Cyanothece sp. ATCC 51142]
Length = 233
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S I PSIL+ADFSRLG EI + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 5 TKSTVISPSILSADFSRLGAEIEAVDKAGADWIHVDVMDGRFVPNITIGPLIVDAIRPYT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 65 KKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIRELGKQAGVVLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I + KIR+ + + ++ + +EVDGG
Sbjct: 125 STPLDLIEYVLELCDLVLIMSVNPGFGGQSFIPEMVTKIRKLRQMCDEKGLDPWIEVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 185 LKPANTWQVLEAGANAIVAGSAVFKAD---DYAEAIEGIRNS 223
>gi|238797283|ref|ZP_04640784.1| Ribulose-phosphate 3-epimerase [Yersinia mollaretii ATCC 43969]
gi|238718920|gb|EEQ10735.1| Ribulose-phosphate 3-epimerase [Yersinia mollaretii ATCC 43969]
Length = 225
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 132/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ + AGAD+ V GS+ F+Q
Sbjct: 186 RQIAAAGADMFVAGSAIFSQ 205
>gi|300690304|ref|YP_003751299.1| D-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum PSI07]
gi|299077364|emb|CBJ49990.1| D-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum PSI07]
Length = 242
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 130/211 (61%), Gaps = 11/211 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++ G V ++R ++
Sbjct: 9 GFRIAPSILSADFARLGEEVRRVIEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQR 68
Query: 64 -----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ N
Sbjct: 69 DGKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIREQGCKAGLVFN 128
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR------QAKALIGKRSISL 172
P TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R A A R I L
Sbjct: 129 PATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALNKLRAVRQKLDAYAERTGRRILL 188
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
E+DGGV + NI + +AGAD V GS+ F +
Sbjct: 189 EIDGGVKADNIAEIARAGADTFVAGSAVFGK 219
>gi|241664339|ref|YP_002982699.1| ribulose-phosphate 3-epimerase [Ralstonia pickettii 12D]
gi|240866366|gb|ACS64027.1| ribulose-phosphate 3-epimerase [Ralstonia pickettii 12D]
Length = 241
Score = 189 bits (479), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 132/210 (62%), Gaps = 11/210 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS- 63
+I PSIL+ADF+RLGEE+ + ++GA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVLESGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQKD 69
Query: 64 ----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+S +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVSPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDNGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALNKLRAVRQKLDAYQDKTGRKILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
+DGGV + NI + +AGAD V GS+ F++
Sbjct: 190 IDGGVKADNIAEIAKAGADTFVAGSAVFSK 219
>gi|239816003|ref|YP_002944913.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus S110]
gi|239802580|gb|ACS19647.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus S110]
Length = 234
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 147/220 (66%), Gaps = 5/220 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS+L+A+F+RLGEE++ + +AGA IHFDVMD +VPN++ G V +++ Y+
Sbjct: 7 AMRIAPSLLSANFARLGEEVTAVVEAGADLIHFDVMDNHYVPNLTIGPLVCEAIKPYATV 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG II+FHPE+S HI R++R I G K G+ +NP TP+
Sbjct: 67 PIDVHLMVKPVDALIPMFAQAGASIISFHPEASEHIDRTIRLIRDSGCKAGLVLNPATPL 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
A+L+ V+D++D++L+M+VNPGFGGQ IES +PKI + I R I LEVDGGV
Sbjct: 127 AVLDHVLDQLDLVLLMSVNPGFGGQSFIESVLPKIEAVRRRIDASGREIWLEVDGGVKPD 186
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
N + AGAD LV GS+ FN Y + + ++ +AL
Sbjct: 187 NAARIGAAGADTLVAGSAVFNGG---RYREAIGAIRAAAL 223
>gi|25011858|ref|NP_736253.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae NEM316]
gi|77414162|ref|ZP_00790327.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 515]
gi|24413399|emb|CAD47478.1| unknown [Streptococcus agalactiae NEM316]
gi|77159785|gb|EAO70931.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 515]
Length = 220
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 126/198 (63%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +I A AG DI+T H E++ HI +L+ I G K GV INP TPV
Sbjct: 65 DCHLMVVDPERYIEDFAQAGADIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L ++D +D ILIMTVNPGFGGQ I + K++ A + +EVDGG+ + I
Sbjct: 125 LIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ +AGA++ V GS F
Sbjct: 185 KAAAEAGANVFVAGSYLF 202
>gi|111658869|ref|ZP_01409490.1| hypothetical protein SpneT_02000040 [Streptococcus pneumoniae
TIGR4]
Length = 239
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP T V
Sbjct: 86 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 237
>gi|254166703|ref|ZP_04873557.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
gi|289596158|ref|YP_003482854.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
gi|197624313|gb|EDY36874.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
gi|289533945|gb|ADD08292.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
Length = 215
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 138/215 (64%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFSRL +EI K GA +H D+MDG FVPNI+FG VI+S+R +
Sbjct: 2 VKVSPSILSADFSRLCDEIKFCEKGGADMLHLDIMDGHFVPNITFGPVVIKSIRKCTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D + +AG DIIT H E I+ LR IH G + G+AINPETP
Sbjct: 62 FDAHLMIERPDKFVKDFVNAGSDIITVHREIKISIKNVLRKIHNYGAEAGIAINPETPFE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+++ +++++ +LIM+V+PGF GQ IE T+ KI++A+ I + + ++ VDGGV N
Sbjct: 122 KVKEHLEDVEYLLIMSVHPGFAGQSFIEDTLEKIKEARKYIDEEGLEVQIAVDGGVKHHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +V AGAD+LV S+ FN E S K++ +K
Sbjct: 182 AKRIVDAGADILVAASAIFNGNVE-SNIKKMKAIK 215
>gi|42520556|ref|NP_966471.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410295|gb|AAS14405.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 225
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 138/222 (62%), Gaps = 13/222 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF++LGEE+ I+ G IH DVMDG FVPNI+ G V+ ++R YS+
Sbjct: 2 SIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK--------KTGV 115
FD HLM+ S HI +AG DIIT H E H+ R +R I + + GV
Sbjct: 62 PFDVHLMVKSPGKHIESFINAGADIITVHAEVETHLERLIRKIKSYKNVNDEKKPIQVGV 121
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLE 173
+I P T ++LE +I E+D++LIMTVNPGFGGQ+ I S + KI K +I +R++ +
Sbjct: 122 SIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQLNKISTIKKMIQERNLKTQIS 181
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQ---KGEISYAKR 212
VDGG+ N +++AGAD+LV GS+ F K I+Y K
Sbjct: 182 VDGGINFFNAADIIKAGADILVAGSAIFKAEDIKKAINYLKN 223
>gi|315658493|ref|ZP_07911365.1| ribulose-phosphate 3-epimerase [Staphylococcus lugdunensis M23590]
gi|315496822|gb|EFU85145.1| ribulose-phosphate 3-epimerase [Staphylococcus lugdunensis M23590]
Length = 214
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 132/214 (61%), Gaps = 5/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ADFS+L +E+ + +AG +HFDVMDG FVPNIS G V+ ++R +
Sbjct: 3 KLYPSLLSADFSQLNQELHKLEQAGVDGLHFDVMDGQFVPNISVGFPVLEAVRRETTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + +I A AG D I+ H E++PHI R+L I K GV INP TPV +
Sbjct: 63 DVHLMIAQPERYIEQFAQAGADFISVHVEATPHIHRALELIKLQNIKAGVVINPGTPVEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQQ I+S + K++Q L I +EVDGG+ + I
Sbjct: 123 IKPVLSIVDYVLVMTVNPGFGGQQFIQSCVAKVQQLAELKAINSYDFDIEVDGGINDQTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +AGA + V GS FF YA DLK
Sbjct: 183 KLCAEAGASMFVAGSYFFKHH---DYAVVTQDLK 213
>gi|254830510|ref|ZP_05235165.1| hypothetical protein Lmon1_04077 [Listeria monocytogenes 10403S]
Length = 216
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 136/217 (62%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F +G+I L L K L
Sbjct: 183 CTLAGADLIVVGSYLF--EGDIE--ANLEKLSKGVLT 215
>gi|78484609|ref|YP_390534.1| ribulose-phosphate 3-epimerase [Thiomicrospira crunogena XCL-2]
gi|78362895|gb|ABB40860.1| ribulose-5-phosphate 3-epimerase [Thiomicrospira crunogena XCL-2]
Length = 234
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 135/215 (62%), Gaps = 8/215 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS----- 61
I PSIL+ADF++LG ++ ++ AGA +HFDVMD +VPN++ G V SL+++
Sbjct: 8 IAPSILSADFAQLGTDVKDVIAAGADVVHFDVMDNHYVPNLTIGPLVCESLKNFMVKEDV 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG DIITFHPE+S HI RSL+ I A G + G+ NP T
Sbjct: 68 KAPIDVHLMVKPVDRLIGDFASAGADIITFHPEASEHIDRSLQLIKAEGCQAGLVFNPGT 127
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
++ LE V+D+IDMILIM+VNPGFGGQ I + K++ A+ +I + R I LE+DGGV
Sbjct: 128 SLSYLEHVMDKIDMILIMSVNPGFGGQAFIPQALEKLKAARKMIDESGRDIRLEIDGGVK 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
NI + AG D V GS F K S A R +
Sbjct: 188 VENIAEVAAAGCDTFVSGSGIFG-KASASDANRYD 221
>gi|254431669|ref|ZP_05045372.1| ribulose-phosphate 3-epimerase [Cyanobium sp. PCC 7001]
gi|197626122|gb|EDY38681.1| ribulose-phosphate 3-epimerase [Cyanobium sp. PCC 7001]
Length = 270
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 140/220 (63%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ + PSIL+ADFSRLG+++ + AGA IH DVMDG FVPNI+ G ++++LR +
Sbjct: 46 TKSLVVSPSILSADFSRLGDDVRAVDAAGADWIHVDVMDGRFVPNITIGPLIVQALRPVT 105
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 106 TKPLDVHLMIVEPEKYVADFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPST 165
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++L+M+VNPGFGGQ IES + KIR + + + + +EVDGG+
Sbjct: 166 PIDTLEYCLELCDLVLVMSVNPGFGGQSFIESQVDKIRDLRRMCDAKGLDPWIEVDGGIK 225
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ SYA+ + +++S
Sbjct: 226 AENAWKVIEAGANAIVSGSGVFNQP---SYAEAITGIRQS 262
>gi|16802548|ref|NP_464033.1| hypothetical protein lmo0505 [Listeria monocytogenes EGD-e]
gi|47094731|ref|ZP_00232346.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|224502194|ref|ZP_03670501.1| hypothetical protein LmonFR_06687 [Listeria monocytogenes FSL
R2-561]
gi|254829402|ref|ZP_05234089.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|254900269|ref|ZP_05260193.1| hypothetical protein LmonJ_10660 [Listeria monocytogenes J0161]
gi|254911177|ref|ZP_05261189.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
gi|254935505|ref|ZP_05267202.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|255025878|ref|ZP_05297864.1| hypothetical protein LmonocytFSL_05215 [Listeria monocytogenes FSL
J2-003]
gi|16409881|emb|CAC98584.1| lmo0505 [Listeria monocytogenes EGD-e]
gi|47016871|gb|EAL07789.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|258601816|gb|EEW15141.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258608082|gb|EEW20690.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|293589104|gb|EFF97438.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
Length = 216
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 136/217 (62%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F +G+I L L K L
Sbjct: 183 CTLAGADLIVVGSYLF--EGDIE--ANLEKLAKGVLT 215
>gi|187930189|ref|YP_001900676.1| ribulose-phosphate 3-epimerase [Ralstonia pickettii 12J]
gi|187727079|gb|ACD28244.1| Ribulose-phosphate 3-epimerase [Ralstonia pickettii 12J]
Length = 241
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 131/210 (62%), Gaps = 11/210 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS- 63
+I PSIL+ADF+RLGEE+ + ++GA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVLESGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQKD 69
Query: 64 ----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+S +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVSPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDNGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALNKLRAVRQKLDAYQDKTGRKILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
+DGGV + NI + +AGAD V GS+ F +
Sbjct: 190 IDGGVKADNIAEIAKAGADTFVAGSAVFGK 219
>gi|15901806|ref|NP_346410.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae TIGR4]
gi|221232707|ref|YP_002511861.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae ATCC
700669]
gi|14973490|gb|AAK76050.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae TIGR4]
gi|220675169|emb|CAR69753.1| putative ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
ATCC 700669]
Length = 218
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP T V
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 216
>gi|83747478|ref|ZP_00944516.1| Ribulose-phosphate 3-epimerase [Ralstonia solanacearum UW551]
gi|207721759|ref|YP_002252197.1| ribulose-phosphate 3-epimerase protein [Ralstonia solanacearum
MolK2]
gi|207744437|ref|YP_002260829.1| ribulose-phosphate 3-epimerase protein [Ralstonia solanacearum
IPO1609]
gi|83725792|gb|EAP72932.1| Ribulose-phosphate 3-epimerase [Ralstonia solanacearum UW551]
gi|206586923|emb|CAQ17507.1| ribulose-phosphate 3-epimerase protein [Ralstonia solanacearum
MolK2]
gi|206595843|emb|CAQ62770.1| ribulose-phosphate 3-epimerase protein [Ralstonia solanacearum
IPO1609]
Length = 242
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 130/211 (61%), Gaps = 11/211 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++ G V ++R ++
Sbjct: 9 GFRIAPSILSADFARLGEEVRRVIEAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHAQR 68
Query: 64 -----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ N
Sbjct: 69 DGKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFN 128
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISL 172
P TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I L
Sbjct: 129 PATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALSKLRAVRQKLDAYADQTGRRILL 188
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
E+DGGV + NI + +AGAD V GS+ F +
Sbjct: 189 EIDGGVKADNIAEIARAGADTFVAGSAVFGK 219
>gi|329297337|ref|ZP_08254673.1| Rpe [Plautia stali symbiont]
Length = 227
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSILAADF+RLGE+ + +AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILAADFARLGEDTAKALEAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +++ I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVNALIPEFAKAGASFITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFG Q I T+ K+R+A+ I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDIILLMSVNPGFGSQSFIPGTLDKLREARRRIDQSGYQIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F G Y K +++++
Sbjct: 186 GQIAAAGADMFVAGSAIF---GHPDYKKVIDEMR 216
>gi|168241620|ref|ZP_02666552.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450559|ref|YP_002047507.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|204928720|ref|ZP_03219919.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|194408863|gb|ACF69082.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|204322153|gb|EDZ07351.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205339056|gb|EDZ25820.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 225
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F++ Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDKP---DYKKVIDEMR 216
>gi|329905776|ref|ZP_08274202.1| Ribulose-phosphate 3-epimerase [Oxalobacteraceae bacterium
IMCC9480]
gi|327547527|gb|EGF32338.1| Ribulose-phosphate 3-epimerase [Oxalobacteraceae bacterium
IMCC9480]
Length = 223
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 141/222 (63%), Gaps = 6/222 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 4 PTYHIAPSILSADFARLGEEVRNVVSAGADIIHFDVMDNHYVPNLTIGPLVCAAIRPHVQ 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D I A AG +II+FHPE+S HI R+L+ I G K G+ NP TP
Sbjct: 64 VPIDVHLMVKPVDRLIPDFAKAGANIISFHPEASEHIDRTLQLIRDNGCKAGLVFNPGTP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ L+ V+D+ID+ILIM+VNPGFGGQ I + KI + LI + R+I LEVDGG+
Sbjct: 124 LHFLDHVMDKIDLILIMSVNPGFGGQSFIPEALKKIAAVRKLIDESGRTILLEVDGGIKI 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
NI + +AGAD V GS+ F G Y K + D ++ LA
Sbjct: 184 ENIAAAAKAGADTFVAGSAIF---GAADY-KTVIDAMRAELA 221
>gi|255282552|ref|ZP_05347107.1| ribulose-phosphate 3-epimerase [Bryantella formatexigens DSM 14469]
gi|255266845|gb|EET60050.1| ribulose-phosphate 3-epimerase [Bryantella formatexigens DSM 14469]
Length = 217
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF LGE+I +AGA IH DVMDG FVP+ISFG V+ S+R + +FD
Sbjct: 5 LAPSILAADFCVLGEQIREADEAGADYIHIDVMDGMFVPSISFGMPVVSSIRRATGKLFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ + ++ A G D IT H E H+ R+L+ I +G + GVA+NP TP++ L
Sbjct: 65 VHMMVQDPERYLKDFAACGADSITVHAECCRHLDRTLQEIRELGLRAGVALNPATPLSYL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ V+D+ DM+L+MTVNPGFGGQ IES++ KIR + + + + +EVDGG+ + +
Sbjct: 125 DYVLDKTDMVLLMTVNPGFGGQAFIESSLEKIRTLRQRLDAQGLETDIEVDGGINRKTLP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+++AGA+++V GS+ F G+I K + +LK+
Sbjct: 185 RVLEAGANVIVAGSAVFG--GDI--CKNVKELKE 214
>gi|168232616|ref|ZP_02657674.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168260800|ref|ZP_02682773.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168818708|ref|ZP_02830708.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194472805|ref|ZP_03078789.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197251606|ref|YP_002148404.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|238913606|ref|ZP_04657443.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|194459169|gb|EDX48008.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197215309|gb|ACH52706.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205333095|gb|EDZ19859.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205344669|gb|EDZ31433.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350474|gb|EDZ37105.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|320087896|emb|CBY97658.1| D-ribulose-5-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 225
Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F++ Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDKP---DYKKVIDEMR 216
>gi|118581642|ref|YP_902892.1| ribulose-phosphate 3-epimerase [Pelobacter propionicus DSM 2379]
gi|118504352|gb|ABL00835.1| ribulose-5-phosphate 3-epimerase [Pelobacter propionicus DSM 2379]
Length = 221
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 143/217 (65%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLGEEI ++ AGA +H DVMDG FVPNI+ G V+ + R +D
Sbjct: 3 KIAPSILSADFSRLGEEIRSLEAAGADYVHVDVMDGHFVPNITIGPLVVEAARRVTDLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E+ H+ R+++ I ++GK+ GVA+NP TP+
Sbjct: 63 DVHLMIENPDRYIPDFAAAGADIIVVHAEAVYHLHRTVQLIRSLGKRPGVALNPATPLQC 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
LE V+D++D++L+MTVNPGFGGQ I+ +PKI +A++ +R LEVDGGV NI
Sbjct: 123 LEYVLDDLDLVLLMTVNPGFGGQSFIDGCLPKIHALRAMLDRRGCEAELEVDGGVKISNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ F G Y + ++K+ A
Sbjct: 183 AQVSHAGADVFVAGSAVF---GSQDYGATIAEMKRLA 216
>gi|303232089|ref|ZP_07318792.1| ribulose-phosphate 3-epimerase [Veillonella atypica ACS-049-V-Sch6]
gi|302513195|gb|EFL55234.1| ribulose-phosphate 3-epimerase [Veillonella atypica ACS-049-V-Sch6]
Length = 216
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+ADFS L +EI ++ AGA +H DVMDG FVPN++FG V++++R ++
Sbjct: 2 IKIAPSMLSADFSILRDEIKSVELAGADYLHIDVMDGHFVPNLTFGVPVVKAIRPHTALP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I + G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPADYVEEYAKIGVEYFTFHQETVPHMHRLIQQIKSAGMKAGVALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I I K++QAK L+ G +EVDGG+
Sbjct: 122 MLEDVAGDLDMILIMSVNPGFGGQSFIPRAIEKVKQAKLLLDSAGNNDAIIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFF 201
+ AGA +LV GS+ F
Sbjct: 182 TCIPIKDAGATMLVAGSAVF 201
>gi|41222|emb|CAA79663.1| unnamed protein product [Escherichia coli]
Length = 221
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ AGAD+ V GS+ +
Sbjct: 186 GEIAAAGADMFVAGSAILTSQ 206
>gi|34497637|ref|NP_901852.1| ribulose-phosphate 3-epimerase [Chromobacterium violaceum ATCC
12472]
gi|34103493|gb|AAQ59855.1| ribulose-phosphate 3-epimerase [Chromobacterium violaceum ATCC
12472]
Length = 227
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 133/207 (64%), Gaps = 6/207 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLG+E+ ++ AGA IHFDVMD +VPN++ G ++R +S +
Sbjct: 3 TFRIAPSILSADFARLGQEVKDVVAAGADIIHFDVMDNHYVPNLTMGPMFCEAIRPHSSA 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ A AG DIITFHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVKPVDALAAAFAKAGADIITFHPEGSEHIDRTLGLIKDAGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEVDGG 177
+ L+ V+D++DMILIM+VNPGFGGQ I + KI+ A+ I + + I LEVDGG
Sbjct: 123 SYLDHVMDKLDMILIMSVNPGFGGQSFIPHALEKIKLARRRIDEYTAKHGGEIWLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK 204
V NI + AGAD V GS+ + QK
Sbjct: 183 VKVDNIAQVAAAGADTFVAGSAIYGQK 209
>gi|116074711|ref|ZP_01471972.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RS9916]
gi|116067933|gb|EAU73686.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RS9916]
Length = 222
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 137/220 (62%), Gaps = 2/220 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFARLGEEVKAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IE+ + KIR + + ++ + +EVDGG+
Sbjct: 123 PIDTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKIRDLRRMCDEKGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ + + + D K+S
Sbjct: 183 GANAWKVIEAGANAIVSGSGVFNQPDYAAAIQGIRDSKRS 222
>gi|332199994|gb|EGJ14068.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA47901]
Length = 218
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFVRAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ GA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKETGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|146329629|ref|YP_001209450.1| ribulose-phosphate 3-epimerase [Dichelobacter nodosus VCS1703A]
gi|146233099|gb|ABQ14077.1| ribulose-phosphate 3-epimerase [Dichelobacter nodosus VCS1703A]
Length = 229
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 140/220 (63%), Gaps = 3/220 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I+I PSILAAD +RLGEE++ + AGA IHFDVMD +VPN++FGA + ++LR+Y +
Sbjct: 6 IEISPSILAADCARLGEEVAQVLAAGADSIHFDVMDNHYVPNLTFGAPICQALRNYGISA 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM +D+ IN A AG IT HPE++ H+ RSL+ I +G K G+A+NP T +
Sbjct: 66 AIDVHLMAQPVDALINAFAQAGATSITIHPETTLHLNRSLQLIRDLGLKAGLALNPATGI 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
+ LE V+D++D+ILIMTVNPGFGGQ + + KIR + + K I L VDGG+ +
Sbjct: 126 SCLEYVLDQLDIILIMTVNPGFGGQNFLPVILDKIRAVRQKLADFKPPIRLAVDGGINQQ 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I + AGAD + GS+ F+ + ++L D A
Sbjct: 186 TIAAAAAAGADTFIAGSAIFHAPDYQNIMQQLRDTATRAF 225
>gi|16762804|ref|NP_458421.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144291|ref|NP_807633.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415399|ref|YP_152474.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|167549317|ref|ZP_02343076.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|197261699|ref|ZP_03161773.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197364329|ref|YP_002143966.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|213053386|ref|ZP_03346264.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213426747|ref|ZP_03359497.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213648702|ref|ZP_03378755.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865260|ref|ZP_03387379.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289824815|ref|ZP_06544258.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25292419|pir||AG1000 ribulose-phosphate 3-epimerase (EC 5.1.3.1) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505110|emb|CAD08131.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139928|gb|AAO71493.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56129656|gb|AAV79162.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095806|emb|CAR61378.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197239954|gb|EDY22574.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|205325667|gb|EDZ13506.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 225
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F++ Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDKP---DYKKVIDEMR 216
>gi|94263589|ref|ZP_01287399.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
gi|93456009|gb|EAT06160.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
Length = 225
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 5/219 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGEEI AGA IH DVMDG FVPN++ G V+ + R ++
Sbjct: 10 RLAPSILSADFARLGEEIRAAEAAGADIIHVDVMDGHFVPNLTIGPPVVAAARRVTELPL 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + ++ A AG D IT H E+ H+ R++ I +GK+ G+ +NP T +A
Sbjct: 70 DVHLMMVNPQDYVEDFARAGADWITIHVETGYHLHRTIHRIKELGKRAGLVLNPGTSLAS 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ ++ E+D++++M+VNPGFGGQ I S + KIRQ + +I +R + +E+DGGVT I
Sbjct: 130 LDYLLAEVDLVMLMSVNPGFGGQSFIPSALAKIRQLRQMIDQRGLKVEIEIDGGVTPATI 189
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AG D+ V GS+ F G YA + +L++ ALA
Sbjct: 190 GEIYRAGTDICVAGSAVF---GRDDYAAAITELRQQALA 225
>gi|154245855|ref|YP_001416813.1| ribulose-phosphate 3-epimerase [Xanthobacter autotrophicus Py2]
gi|154159940|gb|ABS67156.1| Ribulose-phosphate 3-epimerase [Xanthobacter autotrophicus Py2]
Length = 230
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 134/200 (67%), Gaps = 2/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLG E+ + + GA+ IHFDVMD +VPN++ G V++SLR + + D
Sbjct: 8 IAPSILSADFTRLGAEVEAVLEGGAEWIHFDVMDNHYVPNLTIGPLVLQSLRKVTKAFVD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ +D I A AG D+I+FHPE+S H+ RSL+ I + G K G+ +NP TP+++L
Sbjct: 68 VHLMVKPVDGMIEAFAGAGADLISFHPEASEHVDRSLQLIRSKGVKAGLVLNPATPLSVL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+ +D++D++L+M+VNPGFGGQ I + K++ + I R I LE+DGGV NI
Sbjct: 128 DYTLDQLDLVLVMSVNPGFGGQAFIPGALDKLKAIRERIDASGRDIRLEIDGGVKVDNIG 187
Query: 185 SLVQAGADLLVVGSSFFNQK 204
++ AGAD V GS+ + K
Sbjct: 188 AIAAAGADTFVAGSAIYGAK 207
>gi|332289736|ref|YP_004420588.1| ribulose-phosphate 3-epimerase [Gallibacterium anatis UMN179]
gi|330432632|gb|AEC17691.1| ribulose-phosphate 3-epimerase [Gallibacterium anatis UMN179]
Length = 224
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 133/206 (64%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+A+ + LG+++ + AGA IHFDVMD +VPN++FG V ++LR
Sbjct: 1 MKPYL-IAPSILSANLAHLGDDVKKVLAAGADVIHFDVMDNHYVPNLTFGPAVCQALRDD 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S D HLM+ +D I A AG ITFHPE+S HI RSL+ I +G + G+ NP
Sbjct: 60 GISAPIDVHLMVKPVDRLIPDFAKAGATSITFHPEASEHIDRSLQLIKDLGCQAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D+ILIM+VNPGFGGQ I + K+RQA+ I R I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDIILIMSVNPGFGGQSFIPHALEKLRQARQRIISSGRDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + +AGAD+ V GS+ F Q
Sbjct: 180 VKVDNIADIARAGADMFVAGSAIFGQ 205
>gi|116749384|ref|YP_846071.1| ribulose-phosphate 3-epimerase [Syntrophobacter fumaroxidans MPOB]
gi|116698448|gb|ABK17636.1| ribulose-5-phosphate 3-epimerase [Syntrophobacter fumaroxidans
MPOB]
Length = 229
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 131/209 (62%), Gaps = 5/209 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SIL+ADF +L EE+ + +AG IH DVMDG FVPNI+ G DV++++R + D HL
Sbjct: 19 SILSADFGKLAEEVKAVERAGTDWIHVDVMDGHFVPNITIGPDVVKAIRGVTALPLDVHL 78
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
MI + +I AG + H E SPH+ R+++ I +G + V +NP TP+ +EDV
Sbjct: 79 MIEKPERYIEAFIRAGAHYLGVHAEVSPHLHRTVQRIRELGARPVVTLNPSTPLCAVEDV 138
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKSLV 187
+ +IDM+L+MTVNPGFGGQ+ I S +PKIR+ + +I + + LEVDGGV I LV
Sbjct: 139 LGDIDMVLLMTVNPGFGGQKFIPSMLPKIRRCREMIDESRLPVLLEVDGGVNRGTIDDLV 198
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDL 216
AG D+ V GS+ F YA+ +N L
Sbjct: 199 DAGVDVFVAGSAVFAGN---DYARNVNGL 224
>gi|116618603|ref|YP_818974.1| ribulose-5-phosphate 3-epimerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097450|gb|ABJ62601.1| ribulose-5-phosphate 3-epimerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 218
Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 134/214 (62%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+AD++ L ++ + AGA+ +H DVMDG FVP IS+G + ++ LR +D V D
Sbjct: 5 IAPSILSADYTNLERDVKLVEAAGAEYLHIDVMDGTFVPAISYGPNWVKQLRPETDLVLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + + ADAG DII H E++PHI R+L+ I G K V INP TPV+ +
Sbjct: 65 VHLMIQNPERFVEEFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVSAI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E V+D +D +L+MTVNPGFGGQ+ + ST+ KI Q + +R +E+DGGV + IK
Sbjct: 125 EAVLDMVDQVLVMTVNPGFGGQKFLPSTLQKIEQLQTFREERGFDFDIEIDGGVNNETIK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
S AGA + V GS +++ + L DL K
Sbjct: 185 SAYDAGAKVFVAGSYVYDKVDPAAKIGILKDLIK 218
>gi|146277552|ref|YP_001167711.1| ribulose-phosphate 3-epimerase [Rhodobacter sphaeroides ATCC 17025]
gi|145555793|gb|ABP70406.1| ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides ATCC
17025]
Length = 236
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 129/198 (65%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R +
Sbjct: 7 IKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIKGT 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +D +I+ A AG D+IT H E+ PHI R+L+ I G K G+A+NP T +
Sbjct: 67 MDVHLMIAPVDPYIDAFASAGADVITAHLEAGPHIHRTLQAIRGAGCKAGLALNPGTGLD 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D +D++ +MTVNPGFGGQ+ IES + K+R +ALIG R I +E+DGGVT
Sbjct: 127 AVAHLLDLLDLVCVMTVNPGFGGQKFIESQVAKVRDLRALIGDRPIHIEIDGGVTPETAP 186
Query: 185 SLVQAGADLLVVGSSFFN 202
+ AGAD+LV GS+ F
Sbjct: 187 RVAAAGADVLVAGSAVFK 204
>gi|126660277|ref|ZP_01731392.1| ribulose-phosphate 3-epimerase [Cyanothece sp. CCY0110]
gi|126618452|gb|EAZ89206.1| ribulose-phosphate 3-epimerase [Cyanothece sp. CCY0110]
Length = 233
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S I PSIL+ADFSRLG EI + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 5 TKSTVISPSILSADFSRLGAEIEAVDKAGADWIHVDVMDGRFVPNITIGPLIVDAIRPYT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 65 KKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIRELGKQAGVVLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I + KIR+ + + ++ + +EVDGG
Sbjct: 125 STPLDLIEYVLELCDLVLIMSVNPGFGGQSFIPEMVGKIRKLRQMCDEKGLDPWIEVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 185 LKPGNTWQVLEAGANAIVAGSAVFKAD---DYAEAIEGIRNS 223
>gi|30250082|ref|NP_842152.1| ribulose-phosphate 3-epimerase [Nitrosomonas europaea ATCC 19718]
gi|30139189|emb|CAD86059.1| Ribulose-phosphate 3-epimerase [Nitrosomonas europaea ATCC 19718]
Length = 226
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 132/203 (65%), Gaps = 2/203 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+F+RLGEEI+ + +GA IHFDVMD +VPN++ G V ++R + ++
Sbjct: 3 RIAPSILSANFARLGEEITQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTQAMI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +II+FHPE+S HI R++ I G K G+ NP TP++
Sbjct: 63 DVHLMVEPVDRIIPDFAKAGANIISFHPEASRHIDRTIGLIKEQGCKAGLVFNPATPLSY 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+ILIM+VNPGFGGQ I + K+R + I R I LE+DGGV NI
Sbjct: 123 LDHVLDKLDLILIMSVNPGFGGQTFIPEALNKLRLTRERITASSRDILLEIDGGVKVDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGE 206
+ +AGAD V GS+ + E
Sbjct: 183 AEIARAGADTFVAGSAIYGAGKE 205
>gi|119470436|ref|ZP_01613164.1| D-ribulose-5-phosphate 3-epimerase [Alteromonadales bacterium TW-7]
gi|119446361|gb|EAW27637.1| D-ribulose-5-phosphate 3-epimerase [Alteromonadales bacterium TW-7]
Length = 227
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 135/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF++LGE++ ++ AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 10 IAPSILSADFAKLGEDVDSVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +DS I A+AG IITFHPE+S HI R+++ I G K G+ NP T ++
Sbjct: 70 DVHLMVKPVDSIIPQFAEAGASIITFHPEASEHIDRTIQLIKDHGCKAGLVFNPATSLSY 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ VID++D IL+M+VNPGFGGQ I T+ K+ QAK I R I LEVDGG+ NI
Sbjct: 130 LDHVIDKLDTILLMSVNPGFGGQSFIPHTLKKLAQAKQRIVESGRDIRLEVDGGIKVDNI 189
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ QAGAD+ V GS+ FNQ
Sbjct: 190 AAAAQAGADMFVAGSAIFNQ 209
>gi|120434743|ref|YP_860430.1| ribulose-phosphate 3-epimerase [Gramella forsetii KT0803]
gi|117576893|emb|CAL65362.1| ribulose-phosphate 3-epimerase [Gramella forsetii KT0803]
Length = 220
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 134/215 (62%), Gaps = 2/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA+DF L ++ I + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 6 IAPSVLASDFGNLQRDVEMINNSEADWFHIDIMDGVFVPNISFGMPVLKAISKHAKKTID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I A G +I+T H E+ H+ R+L+ I A G K GVAINP T V +L
Sbjct: 66 VHLMIVDPDRYIKEFAQLGANILTVHYEACTHLHRTLQAIKAEGMKAGVAINPHTSVDLL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+DVI +ID++ IM+VNPGFGGQ I++T K+++ K +I + S +E+DGGVT +N
Sbjct: 126 KDVIKDIDLVCIMSVNPGFGGQSFIDNTFSKVQRLKEIIKMNNASTLIEIDGGVTDKNAA 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L +AGAD+LV GS F + + K L + S
Sbjct: 186 ELAKAGADVLVAGSFVFKTEDQPQTIKNLKKIANS 220
>gi|300313179|ref|YP_003777271.1| ribulose-5-phosphate 3-epimerase [Herbaspirillum seropedicae SmR1]
gi|300075964|gb|ADJ65363.1| ribulose-5-phosphate 3-epimerase protein [Herbaspirillum
seropedicae SmR1]
Length = 221
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 133/203 (65%), Gaps = 2/203 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 2 PTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPHVQ 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D I A AG ++ITFHPE+S HI RSL+ I G K G+ NP TP
Sbjct: 62 VPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPGTP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ L+ V+D++DM+LIM+VNPGFGGQ I + KI + + I + R I LEVDGG+
Sbjct: 122 LHYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGIKI 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
NI + +AGAD V GS+ F +
Sbjct: 182 ENIAAAARAGADTFVAGSAIFGK 204
>gi|256830162|ref|YP_003158890.1| ribulose-phosphate 3-epimerase [Desulfomicrobium baculatum DSM
4028]
gi|256579338|gb|ACU90474.1| ribulose-phosphate 3-epimerase [Desulfomicrobium baculatum DSM
4028]
Length = 221
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 131/206 (63%), Gaps = 5/206 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L++DF L E++ + AG K +H+DVMDG FVPNI+FG +I LR S FD H
Sbjct: 8 PSLLSSDFGNLRAELTALEDAGLKWVHWDVMDGAFVPNITFGPPIIGRLRKTSKLFFDVH 67
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI + +I ADAG D++ H ES+ H+ R++ I G KTG+A+NP TP+AI++
Sbjct: 68 LMIERPERYIREFADAGADLLCIHAESTLHLERTISAIREAGMKTGLALNPATPLAIVDY 127
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
++ +DM+LIM+VNPGFGGQ I KI +I R + ++VDGGVT N K L
Sbjct: 128 LLPSLDMVLIMSVNPGFGGQSFIPFCKDKIAALSGMIRARGLETLIQVDGGVTLDNAKEL 187
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKR 212
GAD+LV GS+FF G YA+R
Sbjct: 188 FDLGADVLVSGSAFF---GFPPYAER 210
>gi|67921815|ref|ZP_00515332.1| Ribulose-phosphate 3-epimerase [Crocosphaera watsonii WH 8501]
gi|67856407|gb|EAM51649.1| Ribulose-phosphate 3-epimerase [Crocosphaera watsonii WH 8501]
Length = 233
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S I PSIL+ADFSRLG EI + +AGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 5 TKSTVISPSILSADFSRLGAEIKAVDQAGADWIHVDVMDGRFVPNITIGPLIVDAIRPYT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 65 QKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIRELGKQAGVVLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I + KIR+ + + ++ + +EVDGG
Sbjct: 125 STPLDLIEYVLELCDLVLIMSVNPGFGGQSFIPEMVSKIRKLRQMCDEKGLDPWIEVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 185 LKPNNTWQVLEAGANAIVAGSAVFKAA---DYAEAIEGIRNS 223
>gi|304440673|ref|ZP_07400557.1| ribulose-phosphate 3-epimerase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304370860|gb|EFM24482.1| ribulose-phosphate 3-epimerase [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 213
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 135/197 (68%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ DF+ L E+ + GA +H DVMDG +VPNI+FGA +I+++R +++ FD
Sbjct: 2 ISPSMLSCDFADLKGELEKLNIGGADFVHLDVMDGNYVPNITFGAPIIKAMRPHTEIPFD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI ++ I +AG +IIT HP ++ H+ R+L I + G K GVA+NP ++IL
Sbjct: 62 VHLMIERPENFIEDFVNAGANIITVHPSTTKHLDRTLSLIKSYGVKAGVALNPSDDISIL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
++D++D++L+M+VNPGFGGQ++IES+ KI++ K LI +++ I +EVDGGV N
Sbjct: 122 NWILDKVDLVLVMSVNPGFGGQKMIESSFEKIKEIKKLIEEKNLDIKIEVDGGVKLDNAM 181
Query: 185 SLVQAGADLLVVGSSFF 201
+AGAD+LV GS F
Sbjct: 182 KFYEAGADMLVSGSGIF 198
>gi|122879317|ref|YP_202691.6| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 223
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G+ V ++LR +
Sbjct: 1 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVEAV 222
>gi|238898716|ref|YP_002924397.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229466475|gb|ACQ68249.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 225
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F+RLGE+ +N+ +AGA IHFDVMD +VPN++ G V ++LR + ++
Sbjct: 6 IAPSILSANFARLGEDTANVLRAGADFIHFDVMDNHYVPNLTMGPMVCQALRDHGIEAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ ++ A AG I+FHPE+S HI R+L+ I G + G+A NP T +
Sbjct: 66 DVHLMVKPVDALVSRFAQAGASYISFHPEASEHIDRTLQLIKQQGCQAGLAFNPATSLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I ST K+ Q + +I I LEVDGG+ NI
Sbjct: 126 LDYVLDKLDLILLMSVNPGFGGQAFIPSTFKKLSQVRKIIDDSGYDIRLEVDGGIKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ GAD+ V GS+ F+Q
Sbjct: 186 AEVAHCGADIFVAGSAIFSQ 205
>gi|153954002|ref|YP_001394767.1| ribulose-phosphate 3-epimerase [Clostridium kluyveri DSM 555]
gi|219854616|ref|YP_002471738.1| hypothetical protein CKR_1273 [Clostridium kluyveri NBRC 12016]
gi|146346883|gb|EDK33419.1| Pentose phosphate epimerase [Clostridium kluyveri DSM 555]
gi|219568340|dbj|BAH06324.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 216
Score = 187 bits (476), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 136/204 (66%), Gaps = 4/204 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K +H DVMDG FVPNISFG +I+S+R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKSLDKCKVDLVHIDVMDGSFVPNISFGIPIIKSIRHLTKIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ DAG DIIT H E+ H+ R++ I ++G K VA+NP T V
Sbjct: 62 FDVHLMIEEPARYVKDFVDAGADIITVHFEADRHLDRTVDYIKSLGVKASVALNPATLVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I ++DMILIM+VNPGFGGQ+ IE KI+ K L K + + +EVDGG+T N
Sbjct: 122 NVKYLIPKLDMILIMSVNPGFGGQKYIEYCDSKIKYVKELADKYNKDLMIEVDGGITKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGE 206
I +V+ GA+++V GSS F +GE
Sbjct: 182 IARVVRKGANVIVAGSSVF--RGE 203
>gi|224476331|ref|YP_002633937.1| putative ribulose-5-phosphate 3-epimerase [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420938|emb|CAL27752.1| putative ribulose-5-phosphate 3-epimerase [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 217
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 133/215 (61%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF L E+ + +AG +HFDVMDG FVPNIS G ++ ++ + +D
Sbjct: 2 VKIYPSLLSADFLNLKAELEALEQAGVDGVHFDVMDGQFVPNISIGLPILEAVNAGTDLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI ++ I A G D+I+ H E++PHI R+++ IHA G K GV INP TPVA
Sbjct: 62 IDVHLMIEDPENFIPEFAAKGADMISVHAEATPHIHRAIQLIHAHGAKAGVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E ++ ++D +LIMTVNPGFGGQ I I K+ A K + +EVDGG+
Sbjct: 122 MIEPILHDVDYVLIMTVNPGFGGQAFISQNIDKVSALHAYKEKHDLDFDIEVDGGINEVT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ V AGA +LV GS FF Q Y K ++ LK
Sbjct: 182 AEQCVNAGATMLVTGSYFFKQT---DYGKVVSALK 213
>gi|224369794|ref|YP_002603958.1| Rpe [Desulfobacterium autotrophicum HRM2]
gi|223692511|gb|ACN15794.1| Rpe [Desulfobacterium autotrophicum HRM2]
Length = 222
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 138/217 (63%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ LG+EIS + KAGA IH DVMDG FVPNIS+G ++ + + + D
Sbjct: 4 IAPSILSADFTILGKEISAVEKAGADWIHIDVMDGSFVPNISYGPIIVDACKKVTTLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D I AG D+I+ H E+ H+ R+++ I K GVA+NP TP+ L
Sbjct: 64 VHLMIEHPDHLIPDFVKAGADLISVHAEACTHLHRTVQLIQESKVKAGVAVNPATPLTCL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
E +I+E+D +L+M+VNPGFGGQ+ I+ST+ KI Q ALI G R+I ++VDGGV I
Sbjct: 124 EWIIEELDFVLLMSVNPGFGGQKFIQSTLDKIEQLAALIEETGSRAI-IQVDGGVGPTTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGA V GS+ F+ YA+ + L++ A
Sbjct: 183 NGVAKAGATSFVAGSAIFSTP---DYAQTITMLRQQA 216
>gi|149928488|ref|ZP_01916722.1| Ribulose-phosphate 3-epimerase [Limnobacter sp. MED105]
gi|149822791|gb|EDM82043.1| Ribulose-phosphate 3-epimerase [Limnobacter sp. MED105]
Length = 226
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 136/209 (65%), Gaps = 7/209 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNPFV-IAPSILSADFARLGEEVKNVIAAGADWVHFDVMDNHYVPNLTIGPLVCEALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++ D HLM+ +D I A AG ++I+ HPE + H+ R+L I G + G+ +NP
Sbjct: 60 TTAMIDVHLMVRPVDRIIPDFAKAGANLISVHPEGTDHLDRTLGLIRDSGCQAGIVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEV 174
TP++ ++ V+D++D+IL+M+VNPGFGGQ I + K+ + + I G ++I LEV
Sbjct: 120 TPISWVDHVMDKLDLILVMSVNPGFGGQSFIPQALVKLAELRKRIDAHVAKGGQNIRLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
DGGV NI + +AGAD V GS+ F +
Sbjct: 180 DGGVKPDNIAQIARAGADTFVAGSAIFGK 208
>gi|121606548|ref|YP_983877.1| ribulose-phosphate 3-epimerase [Polaromonas naphthalenivorans CJ2]
gi|120595517|gb|ABM38956.1| ribulose-5-phosphate 3-epimerase [Polaromonas naphthalenivorans
CJ2]
Length = 230
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 137/209 (65%), Gaps = 8/209 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PS+L+ADF+RLG+E+ + GA IHFDVMD +VPN++FG + ++L+ ++
Sbjct: 6 PTYRIAPSLLSADFARLGDELKAVIAGGADWIHFDVMDNHYVPNLTFGPMICQALKPHAK 65
Query: 63 SV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
D HLM+ +DS ADAG D+I+FHPE+S H+ RS++ I A G K G+
Sbjct: 66 RADGTAVPIDVHLMVQPVDSLAAAFADAGADLISFHPEASSHVHRSVQAIKARGCKAGLV 125
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEV 174
NP TP+ +L+ ID+ID+ILIM+VNPGFGGQ I+S + KI QA+ I R I LEV
Sbjct: 126 FNPATPLDVLDWTIDDIDLILIMSVNPGFGGQSFIDSALRKIEQARKRIEASGRDIRLEV 185
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
DGG+ NI + AGAD V GS+ F +
Sbjct: 186 DGGIKIDNIARVAAAGADTFVAGSAIFGK 214
>gi|138894699|ref|YP_001125152.1| ribulose-phosphate 3-epimerase [Geobacillus thermodenitrificans
NG80-2]
gi|196247681|ref|ZP_03146383.1| Ribulose-phosphate 3-epimerase [Geobacillus sp. G11MC16]
gi|134266212|gb|ABO66407.1| Putative ribulose-5-phosphate 3-epimerase [Geobacillus
thermodenitrificans NG80-2]
gi|196212465|gb|EDY07222.1| Ribulose-phosphate 3-epimerase [Geobacillus sp. G11MC16]
Length = 218
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 137/214 (64%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RL EEI ++ + GA IH DVMDG FVPN++ G ++ ++R +
Sbjct: 2 IRIAPSILSADFARLAEEIRSVEEGGADWIHVDVMDGHFVPNLTLGPPIVAAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D +I +AG D+I+ H E+ H+ R++ I K GV +NP TPV
Sbjct: 62 LDVHLMITDPDRYIPAFVEAGADLISVHVEACVHLHRTIHFIKEQSVKAGVVLNPHTPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ VI ++D++L+M+VNPGFGGQ I + +PKIR+ L + + I +EVDGGV ++
Sbjct: 122 MIRHVIADVDLVLLMSVNPGFGGQAFIPAVVPKIREVARLANEQNKKIDIEVDGGVNAKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
V+AGA++LV GS+ +N + + L ++
Sbjct: 182 APLCVEAGANVLVAGSAIYNNPDRAAAIRALREV 215
>gi|15806418|ref|NP_295124.1| ribulose-phosphate 3-epimerase [Deinococcus radiodurans R1]
gi|6459156|gb|AAF10970.1|AE001985_7 ribulose-phosphate 3-epimerase [Deinococcus radiodurans R1]
Length = 299
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 137/214 (64%), Gaps = 4/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++++ PSIL+ DFSRLGEE+ I AGA H DVMDG FVPNISFG ++ + R S+
Sbjct: 85 AVKLAPSILSCDFSRLGEELQAI--AGADWAHVDVMDGAFVPNISFGLPILAAARRASNL 142
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A+AG D IT H E++ HI R+++ I +GKK GV +NP TP+
Sbjct: 143 PMDVHLMIERPERYLRDFAEAGADSITVHVEATQHIHRAVQQIKELGKKAGVTLNPGTPL 202
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+ ++ ++D++L+M+VNPGFGGQ+ I ++ ++R + + + L+VDGGVT
Sbjct: 203 EAVRPLLADVDLVLVMSVNPGFGGQKFIPASTERVRTLRGWLDEVNPQAELQVDGGVTPA 262
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N + L +AGA LV GS+ + G + +RL D
Sbjct: 263 NARLLAEAGATCLVAGSAVYGADGGAAGVQRLRD 296
>gi|84625484|ref|YP_452856.1| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84369424|dbj|BAE70582.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 233
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G+ V ++LR +
Sbjct: 11 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVEAV 232
>gi|114332061|ref|YP_748283.1| ribulose-phosphate 3-epimerase [Nitrosomonas eutropha C91]
gi|114309075|gb|ABI60318.1| ribulose-5-phosphate 3-epimerase [Nitrosomonas eutropha C91]
Length = 226
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 132/199 (66%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+F+RLGEE++ + +GA IHFDVMD +VPN++ G V ++R + ++
Sbjct: 3 RIAPSILSANFARLGEEVTQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTKAII 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +II+FHPE+S HI R++ I G K G+ NP TP++
Sbjct: 63 DVHLMVEPVDRIIPDFAKAGANIISFHPEASRHIDRTIGLIKEQGCKAGMVFNPATPLSY 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+ILIM+VNPGFGGQ I + K+R + I R I LE+DGGV NI
Sbjct: 123 LDHVLDKLDLILIMSVNPGFGGQAFIPEALNKLRLTRERINASGRDILLEIDGGVKVSNI 182
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGAD V GS+ ++
Sbjct: 183 AEIARAGADTFVAGSAIYS 201
>gi|91777687|ref|YP_552895.1| ribulose-5-phosphate 3-epimerase [Burkholderia xenovorans LB400]
gi|91690347|gb|ABE33545.1| ribulose-5-phosphate 3-epimerase [Burkholderia xenovorans LB400]
Length = 239
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 141/217 (64%), Gaps = 9/217 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+RL +EI ++T AGA IH DVMD +VPN++ G V ++R ++ D
Sbjct: 6 IAPSLLSADFARLADEIRDVTAAGADWIHLDVMDNHYVPNLTVGPLVCAAIRPHTSVPID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM +DS + A+AG + I+FHPE+S H+ R++ I + G + G+A+NP TP+A+L
Sbjct: 66 VHLMTMPVDSLVAGFAEAGANTISFHPEASLHVHRTIELIKSSGARAGLALNPATPLAVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ VI+ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVDGGV +
Sbjct: 126 DHVIERLDVVLVMSVNPGFGGQAFIPETLDKLRALRERVDATMQRTGRLLLIEVDGGVKA 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + +GAD+ V GS+ F G YA+ + +++
Sbjct: 186 ANIARIAASGADVFVAGSAVF---GADDYAQAIGEMR 219
>gi|313206168|ref|YP_004045345.1| ribulose-phosphate 3-epimerase [Riemerella anatipestifer DSM 15868]
gi|312445484|gb|ADQ81839.1| ribulose-phosphate 3-epimerase [Riemerella anatipestifer DSM 15868]
gi|315023148|gb|EFT36161.1| Ribulose-phosphate 3-epimerase [Riemerella anatipestifer RA-YM]
gi|325336387|gb|ADZ12661.1| Pentose-5-phosphate-3-epimerase [Riemerella anatipestifer RA-GD]
Length = 216
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 133/197 (67%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF L +I + ++ A H DVMDG FVPNISFG ++++++ ++ D
Sbjct: 6 IAPSLLSADFGNLQRDIEMLNRSQADWFHVDVMDGRFVPNISFGFPIMKTIKEHARKFVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ D G D+++ H E+ H+ R+++ I + G K GV +NP TPV++L
Sbjct: 66 VHLMIVEPEKYVEEFIDNGADLVSVHYEACTHLHRTIKLIQSKGAKAGVVLNPSTPVSVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I EID++L+M+VNPGFGGQ+ IE+T KI+Q K LI ++ + +++DGGV + N
Sbjct: 126 EDIIGEIDLVLLMSVNPGFGGQKFIENTYKKIKQTKDLILDQNATALIQIDGGVNTDNAS 185
Query: 185 SLVQAGADLLVVGSSFF 201
L + GAD+LV G++ F
Sbjct: 186 KLFEVGADVLVAGNAVF 202
>gi|77165950|ref|YP_344475.1| ribulose-phosphate 3-epimerase [Nitrosococcus oceani ATCC 19707]
gi|254433715|ref|ZP_05047223.1| ribulose-phosphate 3-epimerase [Nitrosococcus oceani AFC27]
gi|76884264|gb|ABA58945.1| ribulose-5-phosphate 3-epimerase [Nitrosococcus oceani ATCC 19707]
gi|207090048|gb|EDZ67319.1| ribulose-phosphate 3-epimerase [Nitrosococcus oceani AFC27]
Length = 223
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 135/204 (66%), Gaps = 3/204 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE++ + +AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 3 NYKIAPSILSADFARLGEEVTAVLEAGADMVHFDVMDNHYVPNLTIGPLVCEALRKHGIT 62
Query: 64 V-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D A AG + ITFHPE+S HI R+L+ I G K+G+ NP T
Sbjct: 63 ADIDVHLMVKPVDRIAPDFAKAGANYITFHPEASEHIDRTLQLIRDEGCKSGLVFNPATS 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
+ L+ VID++DM+LIM+VNPGFGGQ+ I + + K+R+A+ +I I LE+DGG+
Sbjct: 123 LDYLKYVIDKVDMVLIMSVNPGFGGQKFIPTALDKLREARRIIDASGYPIRLEIDGGIKI 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
NI+ + AGAD V GS+ F +
Sbjct: 183 DNIQQVAMAGADTFVAGSAIFQSE 206
>gi|317969819|ref|ZP_07971209.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CB0205]
Length = 222
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ I PSIL+ADFSRLGE++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKSLVISPSILSADFSRLGEDVRAVDEAGADWIHVDVMDGRFVPNITIGPMIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ H+ R+L I +GK G +NP T
Sbjct: 63 KKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACTHLHRNLAQIKDLGKMAGAVLNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IES + KIR + + ++ + +EVDGG+
Sbjct: 123 PIDTLEYCLELCDLVLIMSVNPGFGGQSFIESQVQKIRDLRRMCDEKGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ SYA + ++ S
Sbjct: 183 AENAWKVIEAGANAIVSGSGVFNQP---SYADAMTGIRNS 219
>gi|270292090|ref|ZP_06198305.1| ribulose-phosphate 3-epimerase [Streptococcus sp. M143]
gi|270279618|gb|EFA25460.1| ribulose-phosphate 3-epimerase [Streptococcus sp. M143]
Length = 218
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 140/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGDFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++ HI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATHHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ +S +EVDGG+ + I
Sbjct: 125 IKHILHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRQEKGLSFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|294638082|ref|ZP_06716341.1| ribulose-phosphate 3-epimerase [Edwardsiella tarda ATCC 23685]
gi|291088790|gb|EFE21351.1| ribulose-phosphate 3-epimerase [Edwardsiella tarda ATCC 23685]
Length = 225
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/222 (46%), Positives = 145/222 (65%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MNPYL-IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S D HLM+ +D I A+AG IITFHPE+S HI R+L+ I + G K G+ +NP
Sbjct: 60 GISAPIDVHLMVKPVDRIIPDFAEAGASIITFHPEASEHIDRTLQLIRSCGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP++ L+ V+D +D IL+M+VNPGFGGQ I +T+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLSCLDYVMDRLDTILLMSVNPGFGGQSFIPATLDKLRQVRERIDASGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI ++ AGAD+ V GS+ F+Q YA+ + +++
Sbjct: 180 VKVDNIGAIAAAGADMFVAGSAIFSQP---DYAQVIAAMRQE 218
>gi|148239637|ref|YP_001225024.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 7803]
gi|147848176|emb|CAK23727.1| Ribulose-phosphate 3-epimerase [Synechococcus sp. WH 7803]
Length = 227
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 138/219 (63%), Gaps = 2/219 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ + PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKSLVVSPSILSADFSRLGEEVKAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK+ G +NP T
Sbjct: 63 TKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKQAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
++ LE ++ D++LIM+VNPGFGGQ IE+ + KIR + + ++ + +EVDGGV
Sbjct: 123 SLSTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKIRDLRRMCDEKGLDPWIEVDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +++AGA+ +V GS FNQ + + + D K+
Sbjct: 183 GGNAWKVIEAGANAIVSGSGVFNQPDYAAAIQGIRDSKR 221
>gi|302341806|ref|YP_003806335.1| ribulose-phosphate 3-epimerase [Desulfarculus baarsii DSM 2075]
gi|301638419|gb|ADK83741.1| ribulose-phosphate 3-epimerase [Desulfarculus baarsii DSM 2075]
Length = 219
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 129/202 (63%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ LGE + GA IH DVMDG FVPN++ G V+ ++R
Sbjct: 2 VMIAPSILSADFAALGEGVRQAADGGADWIHVDVMDGHFVPNLTIGPPVVAAIRKVCALP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I A AG D I+ H E+ H++R+L I +GKK GVA+NP TP+
Sbjct: 62 FDVHLMIETPDKYIEAFAAAGADWISVHAEACTHLQRTLAHIRDLGKKAGVALNPHTPLC 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+LE+++D++D +L+M+VNPGFGGQ I + PK + + +I + R I ++VDGGV+
Sbjct: 122 VLENILDDLDYVLLMSVNPGFGGQSYIPANTPKTARLRRMIEQSGREILIQVDGGVSPAT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I + AGA + V GS+ + K
Sbjct: 182 IGPVAAAGASVFVAGSAIYGDK 203
>gi|257083208|ref|ZP_05577569.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Fly1]
gi|256991238|gb|EEU78540.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Fly1]
Length = 217
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 132/202 (65%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI RSL+ I G K GV INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRSLQMIKNAGVKAGVTINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE+++ KI Q K + + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+AGA++ V GS +N +
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAE 202
>gi|88808515|ref|ZP_01124025.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 7805]
gi|88787503|gb|EAR18660.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 7805]
Length = 227
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 138/219 (63%), Gaps = 2/219 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ + PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKSLVVSPSILSADFSRLGEEVKAVDQAGADWIHVDVMDGRFVPNITIGPLIVDALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 63 AKPLDVHLMIVEPEKYVADFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P++ LE ++ D++LIM+VNPGFGGQ I++ + KIR + + ++ + +EVDGGV
Sbjct: 123 PLSTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRDLRRMCEEKGVDPWIEVDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +++AGA+ +V GS FNQ + + + D K+
Sbjct: 183 GGNAWKVIEAGANAIVSGSGVFNQPDYAAAIQGIRDSKR 221
>gi|150026088|ref|YP_001296914.1| ribulose-phosphate 3-epimerase [Flavobacterium psychrophilum
JIP02/86]
gi|149772629|emb|CAL44112.1| Ribulose-phosphate 3-epimerase [Flavobacterium psychrophilum
JIP02/86]
Length = 219
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 136/213 (63%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L +I I + A H DVMDG FVPNIS+G VI +++ ++ D
Sbjct: 6 IAPSVLAADFANLQRDIEMINNSQADWFHIDVMDGHFVPNISYGMPVIEAIKKHATKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I A G DIIT H ES+ H+ R+L I G K GV +N TPV++L
Sbjct: 66 VHLMIEKPERYIEEFAKIGADIITVHYESTVHLHRTLTQIKNAGCKAGVVLNLTTPVSVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED++ E M+LIM++NPGFGGQ+ E T K+R+ + +I + + +E+DGGVT +N K
Sbjct: 126 EDILSECYMVLIMSINPGFGGQKFEEITYNKVRKLRKMITDQGLHTLIEIDGGVTDKNAK 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
LV+AGA++LV GS F + S A+ + DLK
Sbjct: 186 QLVEAGANVLVAGSYVFKAQ---SPAQAIIDLK 215
>gi|242373511|ref|ZP_04819085.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
M23864:W1]
gi|242348874|gb|EES40476.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
M23864:W1]
Length = 214
Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 135/215 (62%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++++PS+L+ DF L EE+ + KA +HFDVMDG FVPNIS G ++ +++SYS+
Sbjct: 2 VKVLPSLLSVDFLNLKEELDQLEKANVDGLHFDVMDGQFVPNISIGIPLLDAVKSYSNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I + A+ G D+I+ H E++PHI ++ I + KK GV INP TPV
Sbjct: 62 IDVHLMIEQPEKYIKLFAEHGADMISVHVEATPHIHSAIEEIKQLNKKAGVVINPGTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ IE I KI Q L + +++ +EVDGG+ +
Sbjct: 122 TILPVLSNVDYVLVMTVNPGFGGQSFIEQCINKIEQLNQLKHENNLTFDIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K ++ GA +LV GS FF Q +YA+ LK
Sbjct: 182 SKVCIEQGATMLVTGSYFFKQD---NYAQVTETLK 213
>gi|209967299|ref|YP_002300214.1| ribulose-phosphate 3-epimerase [Rhodospirillum centenum SW]
gi|209960765|gb|ACJ01402.1| ribulose-phosphate 3-epimerase [Rhodospirillum centenum SW]
Length = 243
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 132/205 (64%), Gaps = 6/205 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGEE+ + +AG IHFDVMD +VPN++ G V ++R + +
Sbjct: 10 RLAPSILSADFARLGEEVQRVVEAGCDVIHFDVMDNHYVPNLTIGPLVCEAIRPCTKAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ + + A AG DII+FHPE+S H+ R+L I G + G+ +NP TP+
Sbjct: 70 DVHLMVRPVDALVPMFAKAGADIISFHPEASDHVDRTLALIRDQGCRAGLVLNPATPLHH 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEVDGGVT 179
L+ V+D +D+IL+M+VNPGFGGQ I S + KI + I + I LEVDGG+
Sbjct: 130 LDHVMDRLDLILVMSVNPGFGGQSFIPSALDKIAAIRRRIDAHTERTGAEIWLEVDGGIK 189
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK 204
NI+++ AGAD V GS+ F +
Sbjct: 190 PSNIRAVADAGADTFVAGSAIFGAR 214
>gi|254168866|ref|ZP_04875706.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
gi|197622130|gb|EDY34705.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
Length = 215
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFSRL +EI K GA +H D+MDG FVPNI+FG VI+S+R +
Sbjct: 2 VKVSPSILSADFSRLCDEIKFCEKGGADMLHLDIMDGHFVPNITFGPVVIKSIRKCTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D + +AG DIIT H E I+ LR IH G + G+AINPETP
Sbjct: 62 FDAHLMIERPDKFVKDFVNAGSDIITVHREIKISIKNVLRKIHNYGAEAGIAINPETPFE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
++ +++++ +LIM+V+PGF GQ IE T+ KI++A+ I + + ++ VDGGV N
Sbjct: 122 KVKGHLEDVEYLLIMSVHPGFAGQSFIEDTLEKIKEARKYIDEEGLEVQIAVDGGVKHHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +V AGAD+LV S+ FN E S K++ +K
Sbjct: 182 AKRIVDAGADILVAASAIFNGNVE-SNIKKMKAIK 215
>gi|166713813|ref|ZP_02245020.1| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 223
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVITQMRAAVDAV 222
>gi|188575055|ref|YP_001911984.1| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188519507|gb|ACD57452.1| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 269
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G+ V ++LR +
Sbjct: 47 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKH 105
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 106 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 165
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 166 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 225
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 226 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIVQMRAAVEAV 268
>gi|332982329|ref|YP_004463770.1| ribulose-5-phosphate 3-epimerase [Mahella australiensis 50-1 BON]
gi|332700007|gb|AEE96948.1| ribulose-5-phosphate 3-epimerase [Mahella australiensis 50-1 BON]
Length = 224
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 138/210 (65%), Gaps = 6/210 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ ADF RL +EI + KAG +H DVMDG FVPN + G D+ RS+R +D
Sbjct: 4 KISPSMMCADFGRLEDEIRILEKAGVDYLHIDVMDGHFVPNFAIGPDLTRSIRRLTDIPL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +++I++ DI++ H E++ H+ R+L+ I A G KTGVA+NP TP +
Sbjct: 64 DIHLMVERPENYIDLFEPRLGDIVSVHQEATVHLERTLQIIKAAGAKTGVAVNPATPAIM 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ VIDE D++L+MTVNPGF GQ+L+ ST+ KIR+ K +I + S +EVDG V+ N
Sbjct: 124 IKPVIDEADVVLVMTVNPGFAGQKLVPSTLSKIREVKEMIQESCASAEIEVDGNVSFENA 183
Query: 184 KSLVQAGADLLVVG-SSFFN---QKGEISY 209
++ AGAD+ V G SS FN K E +Y
Sbjct: 184 FKMLAAGADIFVAGTSSIFNADMDKLEAAY 213
>gi|323701789|ref|ZP_08113460.1| ribulose-phosphate 3-epimerase [Desulfotomaculum nigrificans DSM
574]
gi|323533325|gb|EGB23193.1| ribulose-phosphate 3-epimerase [Desulfotomaculum nigrificans DSM
574]
Length = 219
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 143/218 (65%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L + + + +AGA+ +H DVMDG FVPNI+ G ++++LR S+
Sbjct: 2 VKIAPSILSADFANLAQAVQVVEQAGAEYLHIDVMDGHFVPNITIGPLIVKALRPRSNMF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I+ AG D++ H E+ H+ R + + +G K GVA+NP TP+
Sbjct: 62 FDVHLMIEQPDRYISDFVKAGADLVCVHAEACTHLHRCVSQVKELGAKVGVALNPHTPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
I+E ++ +D++L+MTVNPGFGGQ+ I +PKI++ +I ++ ++ +EVDGG+ S
Sbjct: 122 IIEYILPMLDLVLLMTVNPGFGGQKFIPEVLPKIKRLSQIIKEQGLATEIEVDGGINSET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F G + + + D++K+A
Sbjct: 182 ATLVTGAGANVLVAGSAIF---GADNPGQAVKDIRKAA 216
>gi|317486902|ref|ZP_07945712.1| ribulose-phosphate 3-epimerase [Bilophila wadsworthia 3_1_6]
gi|316921777|gb|EFV43053.1| ribulose-phosphate 3-epimerase [Bilophila wadsworthia 3_1_6]
Length = 223
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 137/196 (69%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L+AD L E+S + AG + +H+DVMDG FVPNI+FG VIR LR S FD H
Sbjct: 5 PSLLSADVGNLAAELSALEAAGLRWVHWDVMDGRFVPNITFGQHVIRQLRKRSGLFFDVH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI +++++ AG D++ H E++ H++R+L I +G K GVA+NP TP++ LE
Sbjct: 65 LMIVEPENYLSEFQAAGADMLVVHAEATRHLQRTLAEIRRLGMKAGVALNPATPLSALEY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
V++++DMIL+M+VNPGFGGQ+ + T KIR+ + ++ +R + +++DGGVT N L
Sbjct: 125 VLEDVDMILLMSVNPGFGGQKFLPITYEKIRRLRRMLDERRLETLIQIDGGVTPDNTADL 184
Query: 187 VQAGADLLVVGSSFFN 202
V+AGAD+LV GS+FF+
Sbjct: 185 VRAGADVLVSGSAFFS 200
>gi|58428269|gb|AAW77306.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 336
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G+ V ++LR +
Sbjct: 114 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKH 172
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 173 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 232
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 233 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 292
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 293 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVEAV 335
>gi|332518973|ref|ZP_08395440.1| ribulose-phosphate 3-epimerase [Lacinutrix algicola 5H-3-7-4]
gi|332044821|gb|EGI81014.1| ribulose-phosphate 3-epimerase [Lacinutrix algicola 5H-3-7-4]
Length = 220
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 2/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF L + + + A H DVMDG FVPNIS+G VI++++ ++ D
Sbjct: 6 IAPSMLAADFGNLQRDTEMVNNSDADWFHIDVMDGHFVPNISYGMPVIQAIKKHATKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I A G DIIT H ES+ H+ R+LR I G K GV +N TPV++L
Sbjct: 66 VHLMIEKPERYIEEFAKVGADIITVHHESTVHLHRTLRQIKDAGCKAGVVLNITTPVSVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
ED++ E M+L+M++NPGFGGQ+ T +I++ + +I ++ + +E+DGGVT +NIK
Sbjct: 126 EDILPECYMVLLMSINPGFGGQKFENVTYQRIKKLRKMIDEQGLDTKIEIDGGVTDKNIK 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
LV+AGAD+ V GS F + K L L S
Sbjct: 186 QLVEAGADVFVAGSHVFKSSNQPDTIKNLKALANS 220
>gi|294627229|ref|ZP_06705816.1| ribulose-phosphate 3-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667707|ref|ZP_06732919.1| ribulose-phosphate 3-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598468|gb|EFF42618.1| ribulose-phosphate 3-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602547|gb|EFF45986.1| ribulose-phosphate 3-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 233
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 11 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDATGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVDAV 232
>gi|171462973|ref|YP_001797086.1| Ribulose-phosphate 3-epimerase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192511|gb|ACB43472.1| Ribulose-phosphate 3-epimerase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 241
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 141/222 (63%), Gaps = 14/222 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD---- 62
I PSIL+ADF+ LG+E+ ++ AGA IHFDVMD +VPN++ G V ++R Y++
Sbjct: 14 IAPSILSADFACLGKEVQDVLVAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPYANKDGK 73
Query: 63 -SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLMI +D + A AG + I+FHPE+SPH+ R+L I G + G+ +NP T
Sbjct: 74 PTVIDVHLMIEPVDRIVPDFAKAGANFISFHPEASPHVNRTLNLIRDQGCQAGLVLNPAT 133
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ ++ ID++L+M+VNPGFGGQ I ST+ KI Q +A + + R I LEVD
Sbjct: 134 PLDHLDHTLELIDLVLLMSVNPGFGGQSFISSTLNKIAQVRARLDRYQAETGRHIRLEVD 193
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
GG+ NI + +AGAD V GS+ + G+ +YA + ++
Sbjct: 194 GGIKVDNIAEVAKAGADTFVAGSAIY---GKENYADVITTMR 232
>gi|325919159|ref|ZP_08181216.1| ribulose-5-phosphate 3-epimerase [Xanthomonas gardneri ATCC 19865]
gi|325550366|gb|EGD21163.1| ribulose-5-phosphate 3-epimerase [Xanthomonas gardneri ATCC 19865]
Length = 223
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVDAV 222
>gi|295109194|emb|CBL23147.1| ribulose-phosphate 3-epimerase [Ruminococcus obeum A2-162]
Length = 224
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 142/221 (64%), Gaps = 2/221 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGE+I + +AG K +H DVMDG FVP+ISFG VI+S+R S F
Sbjct: 4 RLCPSILSADFNRLGEQIQALERAGVKWLHIDVMDGDFVPSISFGMPVIKSIRKESRMFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S+ + +I + G D +T H E+ + R++ I G K G++I P TPV
Sbjct: 64 DVHLMVSAPERYIQDFVECGADSVTVHAEACEDLERAIELIKDAGVKVGISIKPATPVND 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+ +++++DM+LIMTV PGFGGQ+ + KI + K +I + ++ +EVDGG+ +
Sbjct: 124 ISHLLEDVDMVLIMTVQPGFGGQKYLTECTEKIEELKEIIDREGLNVDIEVDGGINDETL 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
++ ++AGA++LV GS FN E + K N +K+ + ID
Sbjct: 184 ETAMKAGANILVAGSYVFNGDLESNVHKIQNKMKEISERID 224
>gi|299065573|emb|CBJ36744.1| D-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum CMR15]
Length = 242
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 11/211 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ + + GA IHFDVMD +VPN++ G V ++R ++
Sbjct: 9 GFRIAPSILSADFARLGEEVRRVIEGGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQR 68
Query: 64 -----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ N
Sbjct: 69 DGKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFN 128
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISL 172
P TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I L
Sbjct: 129 PATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALTKLRAVRQKLDAYADKTGRRILL 188
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
E+DGGV + NI + +AGAD V GS+ F +
Sbjct: 189 EIDGGVKADNIAEIARAGADTFVAGSAVFGK 219
>gi|325915203|ref|ZP_08177526.1| ribulose-5-phosphate 3-epimerase [Xanthomonas vesicatoria ATCC
35937]
gi|325538563|gb|EGD10236.1| ribulose-5-phosphate 3-epimerase [Xanthomonas vesicatoria ATCC
35937]
Length = 223
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 146/223 (65%), Gaps = 6/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
S I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 3 STAIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHGIT 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP TP
Sbjct: 63 APIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNPATP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
V IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGGV +
Sbjct: 123 VDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRKKIDALGKPIRLEIDGGVKA 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 183 DNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVDAV 222
>gi|226323822|ref|ZP_03799340.1| hypothetical protein COPCOM_01597 [Coprococcus comes ATCC 27758]
gi|225208006|gb|EEG90360.1| hypothetical protein COPCOM_01597 [Coprococcus comes ATCC 27758]
Length = 220
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 134/199 (67%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF L E I + GA +HFDVMDG FVP+ISFG V+ S++ V
Sbjct: 4 KLSPSILSADFCNLEEGIRQTEENGAVYLHFDVMDGVFVPSISFGMPVLASIKPAVKQVI 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ ++ A+AG DI+T H ES IR +L I A G KTG+AI+P+TPV +
Sbjct: 64 DTHLMITEPIRYVEAFAEAGADILTVHYESCKDIRATLDKIKACGMKTGLAISPDTPVEV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L++ + E+DM L+MTV+PGFGGQ+LI + K+R +A++ +R + ++VDGG+ + N+
Sbjct: 124 LKEFLGEVDMFLVMTVHPGFGGQKLIPEMLDKVRTLRAMLNERGLETDIQVDGGIYAFNV 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
K + AGA+++V GS+ F
Sbjct: 184 KEALDAGANVIVAGSAVFK 202
>gi|257080483|ref|ZP_05574844.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis E1Sol]
gi|256988513|gb|EEU75815.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis E1Sol]
Length = 217
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 133/202 (65%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI R+L+ I G K GV+INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQMIKNAGVKAGVSINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE+++ KI Q K + + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+AGA++ V GS +N +
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAE 202
>gi|17547598|ref|NP_521000.1| ribulose-phosphate 3-epimerase [Ralstonia solanacearum GMI1000]
gi|17429902|emb|CAD16586.1| probable ribulose-phosphate 3-epimerase protein [Ralstonia
solanacearum GMI1000]
Length = 242
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 11/211 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ + + GA IHFDVMD +VPN++ G V ++R ++
Sbjct: 9 GFRIAPSILSADFARLGEEVRRVIEGGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQR 68
Query: 64 -----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ N
Sbjct: 69 DGKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFN 128
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISL 172
P TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I L
Sbjct: 129 PATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALTKLRAVRQKLDAYADRTGRRILL 188
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
E+DGGV + NI + +AGAD V GS+ F +
Sbjct: 189 EIDGGVKADNIAEIARAGADTFVAGSAVFGK 219
>gi|227872155|ref|ZP_03990525.1| ribulose-phosphate 3-epimerase [Oribacterium sinus F0268]
gi|227842013|gb|EEJ52273.1| ribulose-phosphate 3-epimerase [Oribacterium sinus F0268]
Length = 233
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSILAADFS L E+++ AGAK HFD+MDG FVPNIS+GA ++ +LR+ S + F
Sbjct: 16 RLSPSILAADFSALQEDVALAEAAGAKSFHFDIMDGHFVPNISYGAGIVSALRNKSKAFF 75
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ D AG D ++ H E+ H+ RSL+ I +G + GVA+NP T ++
Sbjct: 76 DVHLMVEEPDYFFADYKKAGADRVSVHVEAVKHLDRSLQAIRELGMEGGVALNPATSLST 135
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNI 183
+E+++ ILIM+VNPGFGGQ I T+ KI++ + + +R++ LE VDGGV NI
Sbjct: 136 IEEILPICPYILIMSVNPGFGGQSFISYTLDKIKRLRKMAEERNLPLEIGVDGGVKLDNI 195
Query: 184 KSLVQAGADLLVVGSSFFNQKGEI 207
+++AGA+ +V GSS F +K EI
Sbjct: 196 SPILEAGANFIVAGSSVFGKKDEI 219
>gi|116070676|ref|ZP_01467945.1| ribulose-phosphate 3-epimerase [Synechococcus sp. BL107]
gi|116066081|gb|EAU71838.1| ribulose-phosphate 3-epimerase [Synechococcus sp. BL107]
Length = 221
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 135/218 (61%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSIL+ADFS+LG E+ + KAGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 5 SLVVSPSILSADFSKLGAEVEAVDKAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTQK 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP TP+
Sbjct: 65 PLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLGQIKDLGKKAGAVLNPGTPL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
LE ++ D++LIM+VNPGFGGQ IE+ + KI + + R + +EVDGG+
Sbjct: 125 DTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKISDLRKMCDARGLDPWIEVDGGIKGS 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ YAK + ++ S
Sbjct: 185 NAWKVIEAGANAIVSGSGVFNQP---DYAKAIEGIRTS 219
>gi|189499510|ref|YP_001958980.1| Ribulose-phosphate 3-epimerase [Chlorobium phaeobacteroides BS1]
gi|189494951|gb|ACE03499.1| Ribulose-phosphate 3-epimerase [Chlorobium phaeobacteroides BS1]
Length = 221
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 135/197 (68%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF++L E I+ KAGA +H DVMDG FVPNI+FG +I+++ ++ V D
Sbjct: 8 LAPSILSADFTKLAESIALAEKAGADWMHCDVMDGHFVPNITFGPFIIKAIAQCTNLVID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D++I AG + IT H E+ H+ RS++ I ++G K GV+INP TPV+ L
Sbjct: 68 THLMISDPDTYIADFIQAGSNQITVHQETCAHLHRSVQLIKSLGAKAGVSINPGTPVSTL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E ++ ++D++L+M+VNPGFGGQ+ I S+ K+R+ + + + L VDGGVT N +
Sbjct: 128 EAILPDLDLVLLMSVNPGFGGQKFISSSFDKLRKLDEMRNAMNPEMILAVDGGVTVDNAQ 187
Query: 185 SLVQAGADLLVVGSSFF 201
LV AGAD L+ G++FF
Sbjct: 188 DLVSAGADALIAGTAFF 204
>gi|168492042|ref|ZP_02716185.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC0288-04]
gi|168494776|ref|ZP_02718919.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC3059-06]
gi|225855472|ref|YP_002736984.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae JJA]
gi|307128181|ref|YP_003880212.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae 670-6B]
gi|183573710|gb|EDT94238.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC0288-04]
gi|183575338|gb|EDT95866.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC3059-06]
gi|225722509|gb|ACO18362.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae JJA]
gi|306485243|gb|ADM92112.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae 670-6B]
Length = 218
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP T V
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|317494393|ref|ZP_07952807.1| ribulose-phosphate 3-epimerase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917643|gb|EFV38988.1| ribulose-phosphate 3-epimerase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 227
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 142/217 (65%), Gaps = 13/217 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + +GA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLASGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG II+FHPE+S H+ RSL+ I ++G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIISFHPEASEHVDRSLQLIKSLGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
LE V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + LI R I LEVDGGV NI
Sbjct: 126 LEYVMDKVDVILLMSVNPGFGGQSFIPATLDKLRQVRKLIDASGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ----------KGEISYA 210
++ AGAD+ V GS+ F +GEI+ A
Sbjct: 186 GAIAAAGADMFVAGSAIFGHPDYEQIITQMRGEIAKA 222
>gi|289550998|ref|YP_003471902.1| Ribulose-phosphate 3-epimerase [Staphylococcus lugdunensis
HKU09-01]
gi|289180530|gb|ADC87775.1| Ribulose-phosphate 3-epimerase [Staphylococcus lugdunensis
HKU09-01]
Length = 214
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 5/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ADFS+L +E+ + +AG +HFDVMDG FVPNIS G V+ ++R +
Sbjct: 3 KLYPSLLSADFSQLNQELHKLEQAGVDGLHFDVMDGQFVPNISVGFPVLEAVRRETTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + +I A AG D I+ H E++PHI R+L I K GV INP TPV +
Sbjct: 63 DVHLMIAQPERYIEQFAQAGADFISVHVEATPHIHRALELIKLQNIKAGVVINPGTPVEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ I+S + K++Q L I +EVDGG+ + I
Sbjct: 123 IKPVLSIVDYVLVMTVNPGFGGQHFIQSCVAKVQQLAELKAINSYDFDIEVDGGINDQTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +AGA + V GS FF YA DLK
Sbjct: 183 KLCAEAGASMFVAGSYFFKHH---DYAVVTQDLK 213
>gi|29377574|ref|NP_816728.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis V583]
gi|227517275|ref|ZP_03947324.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0104]
gi|227554538|ref|ZP_03984585.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HH22]
gi|229547457|ref|ZP_04436182.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|255970690|ref|ZP_05421276.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T1]
gi|255974270|ref|ZP_05424856.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T2]
gi|256618127|ref|ZP_05474973.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 4200]
gi|256761057|ref|ZP_05501637.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T3]
gi|256854789|ref|ZP_05560153.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T8]
gi|256958395|ref|ZP_05562566.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DS5]
gi|256960464|ref|ZP_05564635.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|256962957|ref|ZP_05567128.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HIP11704]
gi|257078294|ref|ZP_05572655.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis JH1]
gi|257088229|ref|ZP_05582590.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis D6]
gi|257091360|ref|ZP_05585721.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis CH188]
gi|257417243|ref|ZP_05594237.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis AR01/DG]
gi|257417962|ref|ZP_05594956.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T11]
gi|257420436|ref|ZP_05597426.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis X98]
gi|293385122|ref|ZP_06630948.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|293389095|ref|ZP_06633567.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|294779985|ref|ZP_06745365.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis PC1.1]
gi|300861589|ref|ZP_07107673.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TUSoD Ef11]
gi|307270567|ref|ZP_07551865.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX4248]
gi|307273617|ref|ZP_07554845.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0855]
gi|307276661|ref|ZP_07557779.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX2134]
gi|307284857|ref|ZP_07565013.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0860]
gi|307288883|ref|ZP_07568856.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0109]
gi|307292135|ref|ZP_07572001.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0411]
gi|312902132|ref|ZP_07761392.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0470]
gi|312905424|ref|ZP_07764538.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0635]
gi|312906694|ref|ZP_07765694.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DAPTO 512]
gi|312910844|ref|ZP_07769680.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DAPTO 516]
gi|312953213|ref|ZP_07772059.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0102]
gi|29345041|gb|AAO82798.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis V583]
gi|227075282|gb|EEI13245.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0104]
gi|227176336|gb|EEI57308.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HH22]
gi|229307489|gb|EEN73476.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|255961708|gb|EET94184.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T1]
gi|255967142|gb|EET97764.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T2]
gi|256597654|gb|EEU16830.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 4200]
gi|256682308|gb|EEU22003.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T3]
gi|256710349|gb|EEU25393.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T8]
gi|256948891|gb|EEU65523.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DS5]
gi|256950960|gb|EEU67592.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|256953453|gb|EEU70085.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HIP11704]
gi|256986324|gb|EEU73626.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis JH1]
gi|256996259|gb|EEU83561.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis D6]
gi|257000172|gb|EEU86692.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis CH188]
gi|257159071|gb|EEU89031.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ARO1/DG]
gi|257159790|gb|EEU89750.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T11]
gi|257162260|gb|EEU92220.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis X98]
gi|291077599|gb|EFE14963.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|291081563|gb|EFE18526.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|294452966|gb|EFG21388.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis PC1.1]
gi|295114429|emb|CBL33066.1| ribulose-5-phosphate 3-epimerase [Enterococcus sp. 7L76]
gi|300849050|gb|EFK76803.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TUSoD Ef11]
gi|306496788|gb|EFM66339.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0411]
gi|306500155|gb|EFM69499.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0109]
gi|306503116|gb|EFM72373.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0860]
gi|306506771|gb|EFM75923.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX2134]
gi|306509630|gb|EFM78672.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0855]
gi|306513148|gb|EFM81782.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX4248]
gi|310627342|gb|EFQ10625.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DAPTO 512]
gi|310628830|gb|EFQ12113.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0102]
gi|310631153|gb|EFQ14436.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0635]
gi|311288867|gb|EFQ67423.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DAPTO 516]
gi|311290796|gb|EFQ69352.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0470]
gi|315026435|gb|EFT38367.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX2137]
gi|315028359|gb|EFT40291.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX4000]
gi|315031803|gb|EFT43735.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0017]
gi|315034819|gb|EFT46751.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0027]
gi|315144151|gb|EFT88167.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX2141]
gi|315150895|gb|EFT94911.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0012]
gi|315152782|gb|EFT96798.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0031]
gi|315154703|gb|EFT98719.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0043]
gi|315159383|gb|EFU03400.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0312]
gi|315161206|gb|EFU05223.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0645]
gi|315167218|gb|EFU11235.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1341]
gi|315171204|gb|EFU15221.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1342]
gi|315172957|gb|EFU16974.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1346]
gi|315573266|gb|EFU85457.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0309B]
gi|315577122|gb|EFU89313.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0630]
gi|315581160|gb|EFU93351.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0309A]
gi|323479046|gb|ADX78485.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis 62]
gi|327536235|gb|AEA95069.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis OG1RF]
gi|329576768|gb|EGG58261.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1467]
Length = 217
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 132/202 (65%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI R+L+ I G K GV INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQMIKNAGVKAGVTINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE+++ KI Q K + + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+AGA++ V GS +N +
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAE 202
>gi|314933397|ref|ZP_07840762.1| ribulose-phosphate 3-epimerase [Staphylococcus caprae C87]
gi|313653547|gb|EFS17304.1| ribulose-phosphate 3-epimerase [Staphylococcus caprae C87]
Length = 214
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++++PS+L+ DF L EE+ ++ KA +HFDVMDG FVPNIS G ++ ++RSYS
Sbjct: 2 VKVLPSLLSVDFLNLKEELDHLEKANVDGLHFDVMDGKFVPNISIGIPLLDAVRSYSKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I++ A+ G D+I+ H E++PHI R++ I KK GV INP TPV
Sbjct: 62 IDVHLMIEQPENYIHLFAEHGADMISVHVEATPHIHRAIEEIKLHKKKAGVVINPGTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ I+ I KI Q + + +++ +EVDGG+
Sbjct: 122 SILPVLSIVDYVLVMTVNPGFGGQSFIDQCINKIEQLNQIKHENNLTFDIEVDGGINDST 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K V+ GA +LV GS FF Q YAK N LK
Sbjct: 182 SKYCVEQGATMLVTGSYFFKQD---DYAKVTNALK 213
>gi|53720657|ref|YP_109643.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei K96243]
gi|76810355|ref|YP_334938.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1710b]
gi|52211071|emb|CAH37059.1| putative ribulose-phosphate 3-epimerase [Burkholderia pseudomallei
K96243]
gi|76579808|gb|ABA49283.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1710b]
Length = 243
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 18 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 77
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP TP+
Sbjct: 78 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPL 137
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LE+DGG
Sbjct: 138 NYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEIDGG 197
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V + NI + AGAD V GS+ F G+ Y + + +++ +
Sbjct: 198 VKAENIAEIAAAGADTFVAGSAIF---GKPDYRQVIGEMRDA 236
>gi|126441158|ref|YP_001060559.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 668]
gi|126453569|ref|YP_001067812.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1106a]
gi|134283276|ref|ZP_01769977.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 305]
gi|167721367|ref|ZP_02404603.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei DM98]
gi|167847441|ref|ZP_02472949.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei B7210]
gi|167904415|ref|ZP_02491620.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei NCTC
13177]
gi|167920643|ref|ZP_02507734.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei BCC215]
gi|217424724|ref|ZP_03456221.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 576]
gi|237813944|ref|YP_002898395.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei MSHR346]
gi|242316229|ref|ZP_04815245.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1106b]
gi|254180522|ref|ZP_04887120.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1655]
gi|254190504|ref|ZP_04897012.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei Pasteur
52237]
gi|254198454|ref|ZP_04904875.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei S13]
gi|254259223|ref|ZP_04950277.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1710a]
gi|254300757|ref|ZP_04968202.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 406e]
gi|126220651|gb|ABN84157.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 668]
gi|126227211|gb|ABN90751.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1106a]
gi|134245471|gb|EBA45564.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 305]
gi|157810577|gb|EDO87747.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 406e]
gi|157938180|gb|EDO93850.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei Pasteur
52237]
gi|169655194|gb|EDS87887.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei S13]
gi|184211061|gb|EDU08104.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1655]
gi|217392180|gb|EEC32205.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 576]
gi|237504076|gb|ACQ96394.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei MSHR346]
gi|242139468|gb|EES25870.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1106b]
gi|254217912|gb|EET07296.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1710a]
Length = 228
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LE+DGG
Sbjct: 123 NYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEIDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V + NI + AGAD V GS+ F G+ Y + + +++ +
Sbjct: 183 VKAENIAEIAAAGADTFVAGSAIF---GKPDYRQVIGEMRDA 221
>gi|300113344|ref|YP_003759919.1| ribulose-phosphate 3-epimerase [Nitrosococcus watsonii C-113]
gi|299539281|gb|ADJ27598.1| ribulose-phosphate 3-epimerase [Nitrosococcus watsonii C-113]
Length = 223
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 134/202 (66%), Gaps = 3/202 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
+I PSIL+ADF+RLGEE++ + +AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 5 KIAPSILSADFARLGEEVTAVLEAGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGITAD 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D A AG + ITFHPE+S HI R+L+ I G K+G+ NP T +
Sbjct: 65 IDVHLMVKPVDRIAPDFAKAGANYITFHPEASEHIDRTLQLIRDEGCKSGLVFNPATSLD 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ VID++DM+LIM+VNPGFGGQ+ I + + K+R+A+ +I I LE+DGG+ N
Sbjct: 125 YLKYVIDKVDMVLIMSVNPGFGGQKFIPTALDKLREARRIIDASGYPIRLEIDGGIKIDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I+ + AGAD V GS+ F +
Sbjct: 185 IQQVAMAGADTFVAGSAIFQSE 206
>gi|219682438|ref|YP_002468822.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219622171|gb|ACL30327.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311086259|gb|ADP66341.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086834|gb|ADP66915.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 228
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 131/198 (66%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+I + AG+ IHFDVMD +VPN+S G ++ SLR+Y+ +
Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE++ HI R+L I G K G+A NP TP+
Sbjct: 66 DVHLMVKPVDNLIPQFAKAGATFITFHPEATLHIERTLNLIKENGCKAGLAFNPATPLNF 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ +++++D+IL+M+VNPGFG Q + ST K+R+ + +I I LEVDGGV NI
Sbjct: 126 LDYILEKLDLILLMSVNPGFGNQSFLPSTFNKLREVRKIIDANFSHILLEVDGGVKLDNI 185
Query: 184 KSLVQAGADLLVVGSSFF 201
+ AGA++ V+GS F
Sbjct: 186 ADIACAGANVFVMGSGLF 203
>gi|15617131|ref|NP_240344.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681883|ref|YP_002468269.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471588|ref|ZP_05635587.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387063|sp|P57603|RPE_BUCAI RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|25292406|pir||F84992 ribulose-phosphate 3-epimerase (EC 5.1.3.1) [imported] - Buchnera
sp. (strain APS)
gi|10039196|dbj|BAB13230.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219624726|gb|ACL30881.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311087423|gb|ADP67503.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087916|gb|ADP67995.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 228
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 131/198 (66%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
+ PSIL+ADF+RLGE+I + AG+ IHFDVMD +VPN+S G ++ SLR+Y+ +
Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE++ HI R+L I G K G+A NP TP+
Sbjct: 66 DVHLMVKPVDNLIPQFAKAGATFITFHPEATLHIERTLNLIKENGCKAGLAFNPATPLNF 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ +++++D+IL+M+VNPGFG Q + ST K+R+ + +I I LEVDGGV NI
Sbjct: 126 LDYILEKLDLILLMSVNPGFGNQSFLPSTFNKLREVRKIIDANFSDILLEVDGGVKLDNI 185
Query: 184 KSLVQAGADLLVVGSSFF 201
+ AGA++ V+GS F
Sbjct: 186 ADIACAGANVFVMGSGLF 203
>gi|319945540|ref|ZP_08019800.1| ribulose-phosphate 3-epimerase [Lautropia mirabilis ATCC 51599]
gi|319741326|gb|EFV93753.1| ribulose-phosphate 3-epimerase [Lautropia mirabilis ATCC 51599]
Length = 240
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 133/204 (65%), Gaps = 6/204 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+L+ADF RL EE+ I AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 16 TYRIAPSMLSADFGRLKEEVQAIEAAGADLLHFDVMDNHYVPNLTVGPMVCKALRPHIRM 75
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+S +DS ADAG DIITFHPE+SPH+ R+L+ I + G K G+ NP TP+
Sbjct: 76 PIDVHLMVSPVDSLAAAFADAGADIITFHPEASPHVDRTLQLIRSRGCKAGLVFNPATPL 135
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGG 177
+ L+ +D++D++L+M+VNPGFGGQ I T+ K+R A+ I R I LEVDGG
Sbjct: 136 SWLDYTLDQLDIVLLMSVNPGFGGQSFIPGTLAKLRDARQRIDAEKARSGRDIWLEVDGG 195
Query: 178 VTSRNIKSLVQAGADLLVVGSSFF 201
V NI + AGAD V GS+ F
Sbjct: 196 VKVDNIAEIAAAGADTFVAGSAVF 219
>gi|332799415|ref|YP_004460914.1| ribulose-phosphate 3-epimerase [Tepidanaerobacter sp. Re1]
gi|332697150|gb|AEE91607.1| ribulose-phosphate 3-epimerase [Tepidanaerobacter sp. Re1]
Length = 216
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 131/199 (65%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF L EEI + GA +H DVMDG FVPNI+ G VI SL+ +
Sbjct: 2 VKVAPSILSADFCCLSEEIKKVENGGADLLHIDVMDGHFVPNITLGPPVISSLKGKTYLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + HI+ AG DIIT H ES+ H+ R + I G K GVA+NP TP++
Sbjct: 62 FDVHLMIENPEKHIDDFIKAGADIITVHVESTVHLNRLVNYIKNKGIKPGVALNPSTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ ++D+I MILIM+VNPGFGGQ+ I + KIR K +I + + I +EVDGG+ N
Sbjct: 122 SLQYILDDIYMILIMSVNPGFGGQKFIPKMLEKIRDLKRVILQENPEILIEVDGGINEEN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
+++AGAD+LV GS+ +
Sbjct: 182 APDIIKAGADILVAGSAIY 200
>gi|53717342|ref|YP_105303.1| ribulose-phosphate 3-epimerase [Burkholderia mallei ATCC 23344]
gi|67640253|ref|ZP_00439067.1| ribulose-phosphate 3-epimerase [Burkholderia mallei GB8 horse 4]
gi|121597346|ref|YP_990248.1| ribulose-phosphate 3-epimerase [Burkholderia mallei SAVP1]
gi|124383018|ref|YP_001024747.1| ribulose-phosphate 3-epimerase [Burkholderia mallei NCTC 10229]
gi|126447297|ref|YP_001079085.1| ribulose-phosphate 3-epimerase [Burkholderia mallei NCTC 10247]
gi|167003482|ref|ZP_02269268.1| ribulose-phosphate 3-epimerase [Burkholderia mallei PRL-20]
gi|167740337|ref|ZP_02413111.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 14]
gi|167817554|ref|ZP_02449234.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 91]
gi|167825956|ref|ZP_02457427.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 9]
gi|167912677|ref|ZP_02499768.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 112]
gi|226192990|ref|ZP_03788601.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei Pakistan
9]
gi|254175852|ref|ZP_04882511.1| ribulose-phosphate 3-epimerase [Burkholderia mallei ATCC 10399]
gi|254203269|ref|ZP_04909631.1| ribulose-phosphate 3-epimerase [Burkholderia mallei FMH]
gi|254208605|ref|ZP_04914954.1| ribulose-phosphate 3-epimerase [Burkholderia mallei JHU]
gi|254355759|ref|ZP_04972038.1| ribulose-phosphate 3-epimerase [Burkholderia mallei 2002721280]
gi|52423312|gb|AAU46882.1| ribulose-phosphate 3-epimerase [Burkholderia mallei ATCC 23344]
gi|121225144|gb|ABM48675.1| ribulose-phosphate 3-epimerase [Burkholderia mallei SAVP1]
gi|124291038|gb|ABN00308.1| ribulose-phosphate 3-epimerase [Burkholderia mallei NCTC 10229]
gi|126240151|gb|ABO03263.1| ribulose-phosphate 3-epimerase [Burkholderia mallei NCTC 10247]
gi|147746314|gb|EDK53392.1| ribulose-phosphate 3-epimerase [Burkholderia mallei FMH]
gi|147751292|gb|EDK58360.1| ribulose-phosphate 3-epimerase [Burkholderia mallei JHU]
gi|148024730|gb|EDK82913.1| ribulose-phosphate 3-epimerase [Burkholderia mallei 2002721280]
gi|160696895|gb|EDP86865.1| ribulose-phosphate 3-epimerase [Burkholderia mallei ATCC 10399]
gi|225934960|gb|EEH30936.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei Pakistan
9]
gi|238520945|gb|EEP84401.1| ribulose-phosphate 3-epimerase [Burkholderia mallei GB8 horse 4]
gi|243060996|gb|EES43182.1| ribulose-phosphate 3-epimerase [Burkholderia mallei PRL-20]
Length = 231
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LE+DGG
Sbjct: 123 NYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEIDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V + NI + AGAD V GS+ F G+ Y + + +++ +
Sbjct: 183 VKAENIAEIAAAGADTFVAGSAIF---GKPDYRQVIGEMRDA 221
>gi|28198099|ref|NP_778413.1| ribulose-phosphate 3-epimerase [Xylella fastidiosa Temecula1]
gi|182680727|ref|YP_001828887.1| ribulose-phosphate 3-epimerase [Xylella fastidiosa M23]
gi|28056159|gb|AAO28062.1| D-ribulose-5-phosphate 3-epimerase [Xylella fastidiosa Temecula1]
gi|182630837|gb|ACB91613.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa M23]
gi|307579192|gb|ADN63161.1| ribulose-phosphate 3-epimerase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 223
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 143/221 (64%), Gaps = 8/221 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY +
Sbjct: 6 IAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG +I+FH E+S H+ R+++ I + G G+ NP TPV +
Sbjct: 66 DVHLMVEPVDRIVPDFAQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPATPVDM 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA---LIGKRSISLEVDGGVTSRN 182
L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + L+G R + L+VDGGV N
Sbjct: 126 LDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLG-RPVRLQVDGGVGIDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I ++ +AGAD V GS+ F+ + YA + ++ + A+
Sbjct: 185 IGAIAEAGADTFVAGSAIFHAR---DYADVVAQMRAAVAAV 222
>gi|297617054|ref|YP_003702213.1| ribulose-phosphate 3-epimerase [Syntrophothermus lipocalidus DSM
12680]
gi|297144891|gb|ADI01648.1| ribulose-phosphate 3-epimerase [Syntrophothermus lipocalidus DSM
12680]
Length = 218
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 132/199 (66%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+A+F+ L E+ + KAGA +H DVMDG FVPN++ G V++ LR + +
Sbjct: 2 ILIAPSILSANFAHLAREVKVVEKAGADWLHVDVMDGHFVPNLTIGPQVVKDLRQETGLL 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D ++ AG DIIT H E+S H+ R++ I ++G G+A+NP TP+
Sbjct: 62 FDVHLMIDNPDDYVQAFYQAGADIITVHAEASVHLHRTVSNIKSLGIMAGIALNPATPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+ ++ E+D++LIM+VNPGFGGQ+ I+ + KI + ++ +R + ++VDGG+ +
Sbjct: 122 VLDFILGEVDLVLIMSVNPGFGGQEFIQESTRKISMLRQMLNERGLKAYIQVDGGINAAT 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
VQ+GAD+LV GS F
Sbjct: 182 AALCVQSGADVLVAGSYIF 200
>gi|188989887|ref|YP_001901897.1| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. B100]
gi|167731647|emb|CAP49825.1| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris]
Length = 233
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 146/222 (65%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE+ N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 11 MQPT-AIAPSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRLVPDFADAGATTISFHPEASRHVHRTIQLIRSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDALGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V + NI ++ AGAD V GS+ FN YA+ + ++ +
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQIIAQMRAA 228
>gi|229548026|ref|ZP_04436751.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 29200]
gi|229306902|gb|EEN72898.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 29200]
Length = 217
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 130/200 (65%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI R+L+ I G K GV INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQMIKNAGVKAGVTINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE ++ KI Q K + + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIEKSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
+AGA++ V GS +N
Sbjct: 181 AARCKEAGAEVFVAGSYIYN 200
>gi|94310452|ref|YP_583662.1| ribulose-5-phosphate 3-epimerase [Cupriavidus metallidurans CH34]
gi|93354304|gb|ABF08393.1| D-ribulose-5-phosphate 3-epimerase [Cupriavidus metallidurans CH34]
Length = 232
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 133/206 (64%), Gaps = 8/206 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY----- 60
+I PSIL+ADF+ LG+E+ + AGA IHFDVMD +VPN++ G V ++L+ +
Sbjct: 5 RIAPSILSADFACLGDEVRGVIAAGADWIHFDVMDNHYVPNLTIGPAVAKALKPHTRRAD 64
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S + D HLM+ +D+ A AG +I+FHP++S H+ R+L+ I G K G+A NP
Sbjct: 65 GSSAPLDVHLMVHPVDTLAAEFAQAGAGLISFHPDASVHVDRTLQLIRGAGCKAGLAFNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
P+ +L+ +D+ID++LIM+VNPGFGGQ I+S + KI A+ LI + R I L+VDGG
Sbjct: 125 AAPLDVLDWTLDKIDLVLIMSVNPGFGGQSFIDSALRKIESARRLIDQSGRDIRLQVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ NI+ AGAD V GS+ F Q
Sbjct: 185 IKVDNIRRAADAGADTFVAGSAIFGQ 210
>gi|77747748|ref|NP_635850.2| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|77761087|ref|YP_241571.2| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 223
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE+ N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPT-AIAPSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRLVPDFADAGATTISFHPEASRHVHRTIQLIRSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V + NI ++ AGAD V GS+ FN
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFN 204
>gi|210617182|ref|ZP_03291449.1| hypothetical protein CLONEX_03671 [Clostridium nexile DSM 1787]
gi|210149457|gb|EEA80466.1| hypothetical protein CLONEX_03671 [Clostridium nexile DSM 1787]
Length = 219
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 141/214 (65%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF LG+EI I + GA+ +HFDVMDG FVP+ISFG V+ S+R + V D
Sbjct: 4 LAPSILAADFKELGKEIQTIEENGAQYLHFDVMDGMFVPSISFGVPVLESIRPTTKLVCD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ ++ A AG D+IT H E+ I ++ I A G K GV+I P+TPV +
Sbjct: 64 AHLMVTEPIRYVEAFAKAGADLITVHLEACEDINATIEKIRACGCKVGVSICPDTPVISV 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
++++ ++DMILIM+V+PGFGGQ I ++ KIR+ KA+I + ++VDGG+ + N++
Sbjct: 124 KNLLKKVDMILIMSVHPGFGGQAFIPESLDKIRELKAMIDTEGLCVDIQVDGGIYTHNVE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+++AGA+++V GS+ F + + L LK+
Sbjct: 184 EVIEAGANVIVAGSAIFKGDTANNTKEMLEILKR 217
>gi|162138543|ref|YP_362233.2| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 223
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRRKIDATGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVDAV 222
>gi|21111443|gb|AAM39774.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572141|gb|AAY47551.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 233
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 139/205 (67%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE+ N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 11 MQPT-AIAPSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRLVPDFADAGATTISFHPEASRHVHRTIQLIRSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDALGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V + NI ++ AGAD V GS+ FN
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFN 214
>gi|315146588|gb|EFT90604.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX4244]
gi|315164410|gb|EFU08427.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1302]
Length = 217
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 132/202 (65%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI R+L+ I G K GV INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQIIKNAGVKAGVTINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE+++ KI Q K + + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+AGA++ V GS +N +
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAE 202
>gi|288817549|ref|YP_003431896.1| ribulose-phosphate 3-epimerase [Hydrogenobacter thermophilus TK-6]
gi|288786948|dbj|BAI68695.1| ribulose-phosphate 3-epimerase [Hydrogenobacter thermophilus TK-6]
gi|308751152|gb|ADO44635.1| ribulose-phosphate 3-epimerase [Hydrogenobacter thermophilus TK-6]
Length = 222
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 138/209 (66%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LG+++ + + GA IHFDVMDG FVPNI+FG ++ S++++ + + D
Sbjct: 4 LAPSILSADFWHLGKQVEAVIRGGADLIHFDVMDGHFVPNITFGPVLLESIKNHCNLLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I AG D I+ H E++PHI R+L+ I +G K GVAINP T ++ +
Sbjct: 64 AHLMIDNADMYIPEFVKAGADWISVHIENNPHIHRTLQLIKDLGAKAGVAINPGTSLSAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
E+ + D +L+M+VNPGFGGQ+ IE +I ++R+ + ++ SI +E+DGG+ N++
Sbjct: 124 EEALHYADFVLLMSVNPGFGGQRFIERSIERLRRLRQMVDSINPSILIEIDGGIKLENLE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGAD+ V+GS F+ +R+
Sbjct: 184 EVALAGADVFVIGSGIFSSDNVEEQTRRI 212
>gi|325927749|ref|ZP_08188977.1| ribulose-5-phosphate 3-epimerase [Xanthomonas perforans 91-118]
gi|78034488|emb|CAJ22133.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325541950|gb|EGD13464.1| ribulose-5-phosphate 3-epimerase [Xanthomonas perforans 91-118]
Length = 233
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 11 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRRKIDATGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVDAV 232
>gi|320538334|ref|ZP_08038215.1| ribulose-phosphate 3-epimerase [Treponema phagedenis F0421]
gi|320144833|gb|EFW36568.1| ribulose-phosphate 3-epimerase [Treponema phagedenis F0421]
Length = 209
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 139/209 (66%), Gaps = 4/209 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S + PS+L+ADFS+LG E+ I + G K IH DVMDG FVPN+SFGA V++SL+
Sbjct: 1 MRKSFLLAPSLLSADFSKLGSELIYIEENGGKLIHVDVMDGHFVPNLSFGAPVLKSLKGK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD H M+++ + A+AG + TFH E++ H R + I G K G+++ P
Sbjct: 61 TSLPFDVHFMVTNPSDFVKDFAEAGAEYFTFHIEAAVHAHRLIGLIREYGMKPGISLVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++L++V+ D++L+M+VNPGFGGQ++I I KIRQ K + ++ +S + VDGG+
Sbjct: 121 TPVSVLQEVLPFADLVLVMSVNPGFGGQKMIPECIEKIRQLKKIREEKKLSYLISVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
S+ + +AGAD++V GSSFF+ GE+
Sbjct: 181 NSQTLPVAAEAGADIIVSGSSFFS--GEL 207
>gi|148262277|ref|YP_001228983.1| ribulose-phosphate 3-epimerase [Geobacter uraniireducens Rf4]
gi|146395777|gb|ABQ24410.1| ribulose-5-phosphate 3-epimerase [Geobacter uraniireducens Rf4]
Length = 221
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 145/217 (66%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 3 KIAPSILSADFSRLGDEVRAVEAAGADYIHIDVMDGHFVPNITIGPLVVEAVRKVTRLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E++ H+ R+++ I + GKK GV++NP T +
Sbjct: 63 DVHLMIDAPDRYIGDFAKAGADIIVVHAEATNHLHRTVQLIKSFGKKAGVSLNPATTLHT 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ +++E+D+IL+MTVNPGFGGQ I++ +PKI+ + ++ K+ + LEVDGGV + NI
Sbjct: 123 LDYILEELDLILLMTVNPGFGGQSFIDACLPKIQALRGMLDKKGLETELEVDGGVKASNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ F G YA + ++K+ A
Sbjct: 183 DRIAHAGADVFVAGSAVF---GSDDYAATIAEMKRRA 216
>gi|222033747|emb|CAP76488.1| ribulose-phosphate 3-epimerase (EC 5131) [Escherichia coli LF82]
gi|312946601|gb|ADR27428.1| ribulose-phosphate 3-epimerase [Escherichia coli O83:H1 str. NRG
857C]
gi|320193259|gb|EFW67897.1| Ribulose-phosphate 3-epimerase [Escherichia coli WV_060327]
gi|324008913|gb|EGB78132.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 57-2]
Length = 214
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 136/204 (66%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSI AD RL +EI + + + +H D+MDG +V NI+FG + I +++ S +F
Sbjct: 3 KILPSIFGADILRLKDEIHFLEEEQTEILHVDLMDGTYVSNIAFGPNQIAAMKKASSMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + HI+ + + G ++I+ H ES+PH+ ++ I G+K GV +NP TP ++
Sbjct: 63 DVHMMLANPERHIDDVINTGAEMISVHYESTPHVHYIIQKIKKAGRKAGVVLNPGTPESV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E ++D+ID IL+MT+NPG GQ I ++ KIR K +I R I +EVDGGV N+K
Sbjct: 123 IEYLLDDIDYILLMTINPGQPGQTFIHKSLEKIRNTKKMISGRDIQIEVDGGVNLDNVKQ 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+ +AGADL+VVG + FN++ SY
Sbjct: 183 VKEAGADLIVVGGALFNKQPHESY 206
>gi|198276887|ref|ZP_03209418.1| hypothetical protein BACPLE_03092 [Bacteroides plebeius DSM 17135]
gi|198270412|gb|EDY94682.1| hypothetical protein BACPLE_03092 [Bacteroides plebeius DSM 17135]
Length = 218
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PS+L+A+F+ L ++ I ++ A +H D+MDG FVPNISFG V++ + S
Sbjct: 4 IMVAPSLLSANFADLKSDLEKINQSEADWLHLDIMDGVFVPNISFGFPVLKYVAEISQKP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + I + + G ++ H E+ PH+ R ++ I G K GV +NP TPV+
Sbjct: 64 LDVHLMIVQPEKFIREVKNLGAMMMNVHYEACPHLHRVIQQIKEAGMKAGVTLNPATPVS 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+LED+I E+DM+L+M+VNPGFGGQ+ I +T KI Q + +I + S +EVDGGV N
Sbjct: 124 VLEDIITEVDMVLLMSVNPGFGGQKFIPNTFKKIAQLREMITRNGASALIEVDGGVNQEN 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
L +AGAD+LV GSS FN I ++L
Sbjct: 184 APLLRRAGADVLVAGSSVFNSPDMIKAIQQL 214
>gi|189426657|ref|YP_001953834.1| ribulose-phosphate 3-epimerase [Geobacter lovleyi SZ]
gi|189422916|gb|ACD97314.1| Ribulose-phosphate 3-epimerase [Geobacter lovleyi SZ]
Length = 221
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 141/215 (65%), Gaps = 5/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 3 KIAPSILSADFSRLGDEVRAVEAAGADYIHIDVMDGRFVPNITIGPLVVEAVRKVTSLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ A AG DII H E+ H+ R ++ I +GKK GV++NP TP+ +
Sbjct: 63 DVHLMIEEPERYVEEFAKAGADIIVVHAEACRHLHRVVQQIKGLGKKAGVSLNPATPLHV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++E+D++L+MTVNPGFGGQ IE+ IPKI+ + ++ +R LE+DGG N+
Sbjct: 123 LDYVLEELDLVLLMTVNPGFGGQSFIEACIPKIQALRGMLDRRGCEAELEIDGGAKPSNV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGAD+LV GS+ F G YA + ++K+
Sbjct: 183 ARIAHAGADVLVAGSAVF---GSNDYAATIAEMKR 214
>gi|320334954|ref|YP_004171665.1| ribulose-phosphate 3-epimerase [Deinococcus maricopensis DSM 21211]
gi|319756243|gb|ADV68000.1| ribulose-phosphate 3-epimerase [Deinococcus maricopensis DSM 21211]
Length = 223
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 132/217 (60%), Gaps = 2/217 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S ++ PSIL+ DFSRLG+E+ I + GA +H DVMDG FVPNISFG ++ + R +D
Sbjct: 7 SPRLAPSILSCDFSRLGDELRAIQQGGADLVHVDVMDGLFVPNISFGLPILAAARRATDQ 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I+ AG D +T H E++ H+ R ++ I A G+ GV +NP TP+
Sbjct: 67 YLDVHLMIEQPERYIDAFVQAGADGLTVHVEATRHLHRVVQQIRAHGRDAGVTLNPGTPL 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
L V+ ++ +LIM+VNPGFGGQ I S + +IR +A + LEVDGGV
Sbjct: 127 ETLRPVLADVQRVLIMSVNPGFGGQAFIPSALDRIRAVRAWLDDVNPDAHLEVDGGVGPA 186
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
NI++L+ AGA+ V GSS F G +RL + +
Sbjct: 187 NIRALMDAGANEFVAGSSVFGADGPAEGLRRLREATQ 223
>gi|297569928|ref|YP_003691272.1| ribulose-phosphate 3-epimerase [Desulfurivibrio alkaliphilus AHT2]
gi|296925843|gb|ADH86653.1| ribulose-phosphate 3-epimerase [Desulfurivibrio alkaliphilus AHT2]
Length = 225
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 140/214 (65%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE++ AGA IH DVMDG FVPNI+ G V+ ++R +D D
Sbjct: 12 IAPSILSADFARLGEEVTAAAAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKITDLPLD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + H+ A AG D IT H E+ H+ R++ I +GKK GV +NP TP+ L
Sbjct: 72 VHLMIEEPERHLEAFAAAGADWITVHVETGYHLHRTVHKIKELGKKAGVVLNPATPLNAL 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
+ ++ ++D++++M+VNPGFGGQ I S + K R K +I +R + ++E+DGGV+ ++I
Sbjct: 132 DYLLADVDLVMLMSVNPGFGGQSFIPSALEKTRALKQMITERGLQTAIEIDGGVSPKSIG 191
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ +AGA++ V GS+ F Q YA + +K+
Sbjct: 192 AIREAGANIFVAGSAIFGQP---DYAAVIRAMKE 222
>gi|226226027|ref|YP_002760133.1| ribulose-5-phosphate 3-epimerase [Gemmatimonas aurantiaca T-27]
gi|226089218|dbj|BAH37663.1| ribulose-5-phosphate 3-epimerase [Gemmatimonas aurantiaca T-27]
Length = 221
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 139/215 (64%), Gaps = 5/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS+L+ADF LG+EI+ GA IH DVMDG FVPN+SFG VI ++R +
Sbjct: 2 TVRIAPSVLSADFRILGDEIAMCEAGGADWIHVDVMDGRFVPNLSFGVKVIEAVRKCTKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLM+ + + + AG D++T H E++PH+ R L I +G K GVA+NP TP+
Sbjct: 62 VVDVHLMVQEPEKYFDDYVKAGADVLTIHVEAAPHLDRQLARIKELGVKAGVALNPGTPL 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
A +E+V+ +D++LIM+VNPG+GGQ+ I+ ++ KI + + L+ + + LEVDGG++
Sbjct: 122 AAIEEVVHMLDLVLIMSVNPGYGGQKFIDYSVDKIERMRFLLDQAESNAVLEVDGGISRD 181
Query: 182 NIKSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
I+ AGAD V G++ F + + EI+ + L
Sbjct: 182 TIQRCWSAGADTFVAGNAIFGAADPRAEIAVLRNL 216
>gi|113953634|ref|YP_730887.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9311]
gi|113880985|gb|ABI45943.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9311]
Length = 223
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 138/218 (63%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSIL+ADFSRLGE++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 5 SLVVSPSILSADFSRLGEDVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTKK 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI ++++ A AG DII+ E+ PH+ R+L I +GK G +NP TP+
Sbjct: 65 PLDVHLMIVQPENYVEDFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPSTPL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
LE ++ D++LIM+VNPGFGGQ I++ + KIR + + ++ + +EVDGGV +
Sbjct: 125 DTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRDLRRMCDEKGLDPWIEVDGGVKAA 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ YA + ++ S
Sbjct: 185 NAWKVIEAGANAIVSGSGVFNQP---DYAAAIQGIRNS 219
>gi|218132881|ref|ZP_03461685.1| hypothetical protein BACPEC_00742 [Bacteroides pectinophilus ATCC
43243]
gi|217991754|gb|EEC57758.1| hypothetical protein BACPEC_00742 [Bacteroides pectinophilus ATCC
43243]
Length = 216
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 134/197 (68%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ LGE+I + KAGA+ IH DVMDG FVP+IS+G VI+S+R +D+VFD
Sbjct: 4 LAPSILSADFNVLGEQIQTVAKAGAQYIHVDVMDGIFVPSISYGMPVIKSVRKSTDAVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +I D+G DIIT H E+ I ++R I A G K VAINPETPV +
Sbjct: 64 VHLMITEPVRYIRDFVDSGADIITVHVEACKDIDETIRDIKACGVKAAVAINPETPVDKI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
+D+IDM L+M+V+PGFGGQ+ I + K+R ++ ++ +E+DGG+ N+
Sbjct: 124 MPYLDDIDMALVMSVHPGFGGQKFIPDVLDKVRIIRSYYRDNNMDKDIEIDGGINFDNLP 183
Query: 185 SLVQAGADLLVVGSSFF 201
+++AGA+++V GSS +
Sbjct: 184 EVLEAGANVIVAGSSVY 200
>gi|300854450|ref|YP_003779434.1| ribulose-phosphate 3-epimerase [Clostridium ljungdahlii DSM 13528]
gi|300434565|gb|ADK14332.1| ribulose-phosphate 3-epimerase [Clostridium ljungdahlii DSM 13528]
Length = 216
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 138/211 (65%), Gaps = 3/211 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGE+I ++ K GA IH DVMDG FVPNISFG +I+S+R +
Sbjct: 2 IRIAPSILSADFSKLGEDIKSLDKYGADLIHIDVMDGNFVPNISFGVPIIKSIRPLTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ AG DIIT H E+ HI R++ I + G K VA+NP T V
Sbjct: 62 FDVHLMIEEPSRYVEDFVKAGADIITVHFEADRHIDRTINYIKSFGVKAAVALNPATLVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I +DM+LIM+VNPGFGGQ+ IE K++ K L K +++ +EVDGGV+ N
Sbjct: 122 NIKYLIPYLDMVLIMSVNPGFGGQKYIEYCSDKLKYIKELSSKCNKNLMIEVDGGVSKGN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I +V +GA+++V GS+ F + G I RL
Sbjct: 182 IAKIVDSGANVIVAGSAVF-KGGNIEENIRL 211
>gi|288940027|ref|YP_003442267.1| ribulose-phosphate 3-epimerase [Allochromatium vinosum DSM 180]
gi|288895399|gb|ADC61235.1| ribulose-phosphate 3-epimerase [Allochromatium vinosum DSM 180]
Length = 230
Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 132/204 (64%), Gaps = 3/204 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS- 61
P+ I PSIL+A+F++LGEE+ N+ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 2 PADLIAPSILSANFAKLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGV 61
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG ITFHPE+S H+ R+L+ I G K+G+ NP T
Sbjct: 62 TAPIDVHLMVKPVDRLIPDFAKAGATYITFHPEASEHVDRTLQLIRDSGCKSGLVFNPAT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
P+ L+ V++++DMIL+M+VNPGFGGQ I + + K+R+ + +I I LE+DGGV
Sbjct: 122 PLTYLDYVLEKVDMILLMSVNPGFGGQSFIPTALDKLREVREIIDDSGLDIRLEIDGGVK 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
+ NI + AGAD V GS F Q
Sbjct: 182 ADNIAEIKAAGADTFVSGSGLFGQ 205
>gi|229828527|ref|ZP_04454596.1| hypothetical protein GCWU000342_00591 [Shuttleworthia satelles DSM
14600]
gi|229793121|gb|EEP29235.1| hypothetical protein GCWU000342_00591 [Shuttleworthia satelles DSM
14600]
Length = 216
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 136/195 (69%), Gaps = 2/195 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+AD+ L ++I+ + +AGA+ IH DVMDG FVPNI+ GA V+RS+R+Y+D + D H
Sbjct: 6 PSILSADYGHLADDIALVDEAGAQYIHVDVMDGTFVPNITIGAPVVRSIRNYTDKILDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
+M+ + +A+AG DIIT H E++ H+ R++ + G+A+NP T + +LE
Sbjct: 66 MMVEEPARFVPDMAEAGADIITVHAEATRHLDRTIAAVKEQKVMVGLALNPATSLDVLEY 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSL 186
V+ ++DM+L+M+VNPGFGGQ+ I TI K++Q + ++ ++ I +EVDGG+ N+ +
Sbjct: 126 VLPQLDMVLLMSVNPGFGGQEFIPYTIDKLQQLRQMMDRQGLDIDIEVDGGINLENVTDV 185
Query: 187 VQAGADLLVVGSSFF 201
+ AGA+++V GS+ +
Sbjct: 186 LNAGANIIVAGSAVY 200
>gi|261856693|ref|YP_003263976.1| ribulose-phosphate 3-epimerase [Halothiobacillus neapolitanus c2]
gi|261837162|gb|ACX96929.1| ribulose-phosphate 3-epimerase [Halothiobacillus neapolitanus c2]
Length = 231
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+A+F+ LG+E+ + +GA +HFDVMD +VPN++ G V +LR + +
Sbjct: 6 IAPSILSANFAALGDEVDKVIASGADWVHFDVMDNHYVPNLTIGPLVCEALRKHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S H+ RSL+ I G K+G+ NP TP+ +
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGATYITFHPEASEHVDRSLQLIRDHGCKSGLVFNPATPLDV 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRN 182
LE I+++DMIL+M+VNPGFGGQ+ I + K R A+ +I G+ I LE+DGGV+ N
Sbjct: 126 LEYAIEKVDMILLMSVNPGFGGQKFIPYVLDKARAARKIIDASGRTDIRLEIDGGVSPAN 185
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
I+ + +AG D V GS+ F +
Sbjct: 186 IREIAEAGVDTFVSGSALFGK 206
>gi|94985420|ref|YP_604784.1| ribulose-phosphate 3-epimerase [Deinococcus geothermalis DSM 11300]
gi|94555701|gb|ABF45615.1| Ribulose-phosphate 3-epimerase [Deinococcus geothermalis DSM 11300]
Length = 229
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+LA DF++LGEE+ I A A+ H DVMDG FVPNISFG ++ + R S
Sbjct: 16 VKLAPSLLACDFTQLGEELKRI--ASAEYAHVDVMDGLFVPNISFGLPILSAARRASSLF 73
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ A+AG D +T H E++PHI R++ I +GK+ GV +NP TP+
Sbjct: 74 MDVHLMIERPERYLRDFAEAGADGLTVHVEATPHIHRAVGLIRELGKRAGVTLNPGTPLE 133
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+ V+ ++D++L+M+VNPGFGGQ+ I ++ ++R + + + + LEVDGG+T +N
Sbjct: 134 AVRPVLPDVDLVLVMSVNPGFGGQKFIPESVERVRTLRRWLDELGSAAELEVDGGITPQN 193
Query: 183 IKSLVQAGADLLVVGSSFFNQKG-EISYAK 211
+ L AGA +LV GSS F +G E+ A+
Sbjct: 194 ARLLADAGATVLVAGSSVFGPQGPEVGLAR 223
>gi|325284222|ref|YP_004256763.1| ribulose-phosphate 3-epimerase [Deinococcus proteolyticus MRP]
gi|324316031|gb|ADY27146.1| ribulose-phosphate 3-epimerase [Deinococcus proteolyticus MRP]
Length = 227
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + + PS+LA DF+RLGEE+ + +AG H DVMDG FVPNISFG ++ + R S
Sbjct: 9 PPVLLSPSLLACDFARLGEELHTLEQAGVPWAHVDVMDGMFVPNISFGLPILAAARRVSP 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A+AG D +T ES+ HI R++ I +GK+ GV +NP TP
Sbjct: 69 LYMDVHLMIEQPERYLRDFAEAGADGLTVQVESTRHIHRAVGQIRELGKRAGVTLNPGTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVT 179
+ + V+ ++D++L+M+VNPGFGGQ+ I +++ ++R+ + + IG ++ L+VDGGVT
Sbjct: 129 LEAIRPVLADVDLVLVMSVNPGFGGQKFIPASVERVREVRRMLDDIGSQA-DLQVDGGVT 187
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
++N ++LV AGA LV GS+ F
Sbjct: 188 AQNARALVDAGATNLVAGSAIF 209
>gi|257092790|ref|YP_003166431.1| Ribulose-phosphate 3-epimerase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045314|gb|ACV34502.1| Ribulose-phosphate 3-epimerase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 229
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 139/214 (64%), Gaps = 7/214 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +++ D
Sbjct: 4 IAPSILSADFARLGEEVVNVIAAGADWIHFDVMDNHYVPNLTIGPLVCAAIRPLTEAPID 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ +D + A AG +IITFHPE+S H+ R+L I G ++G+ NP TP+ +
Sbjct: 64 VHLMVRPVDRIVPDFAKAGANIITFHPEASEHVDRTLALIRENGCQSGLVFNPATPLDYM 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI------GKRSISLEVDGGVTS 180
+ V+D++D++L+M+VNPGFGGQQ I ST+ K+ A+A I R I LEVDGGV
Sbjct: 124 DYVMDKLDIVLLMSVNPGFGGQQFIASTLAKLAAARARIDAYERSSGRRIRLEVDGGVKI 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
NI + +AGAD V GS+ F G S A R +
Sbjct: 184 DNIAEIARAGADAFVAGSAVFG-AGRDSDANRYD 216
>gi|4930130|pdb|1RPX|A Chain A, D-Ribulose-5-Phosphate 3-Epimerase From Solanum Tuberosum
Chloroplasts
gi|4930131|pdb|1RPX|B Chain B, D-Ribulose-5-Phosphate 3-Epimerase From Solanum Tuberosum
Chloroplasts
gi|4930132|pdb|1RPX|C Chain C, D-Ribulose-5-Phosphate 3-Epimerase From Solanum Tuberosum
Chloroplasts
Length = 230
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 139/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+FS+LGE++ I +AG IH DVMDG FVPNI+ G V+ SLR +D
Sbjct: 11 IIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLP 70
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 71 LDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTP 130
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ +E V+D +D++LIM+VNPGFGGQ IES + KI + + +R ++ +EVDGGV
Sbjct: 131 LTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGP 190
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ LV GS+ F G YA+ + +K S
Sbjct: 191 KNAYKVIEAGANALVAGSAVF---GAPDYAEAIKGIKTS 226
>gi|291612752|ref|YP_003522909.1| ribulose-phosphate 3-epimerase [Sideroxydans lithotrophicus ES-1]
gi|291582864|gb|ADE10522.1| ribulose-phosphate 3-epimerase [Sideroxydans lithotrophicus ES-1]
Length = 228
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 130/201 (64%), Gaps = 3/201 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
QI PSIL+A+F++LGEE+ N+ +GA +HFDVMD +VPN++ G V +LR + +
Sbjct: 3 QIAPSILSANFAKLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGVTAP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG ITFHPE+S HI R++ I G K G+ NP TP+
Sbjct: 63 IDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHIDRTIGLIKESGCKAGLVFNPATPLD 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+LE + ++DM+L+M+VNPGFGGQ+ I + K R + +I GK + LE+DGGV N
Sbjct: 123 VLEYTLPKLDMVLLMSVNPGFGGQKFIPYVLDKARAVRKMIDAGKYNCRLEIDGGVGPAN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
IK + +AG D V GS+ F++
Sbjct: 183 IKEVAEAGVDTFVAGSAVFSK 203
>gi|2499728|sp|Q43843|RPE_SOLTU RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
AltName: Full=Pentose-5-phosphate 3-epimerase;
Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
Precursor
gi|902739|emb|CAA90426.1| pentose-5-phosphate-3-epimerase [Solanum tuberosum]
Length = 280
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 139/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+FS+LGE++ I +AG IH DVMDG FVPNI+ G V+ SLR +D
Sbjct: 57 IIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLP 116
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 117 LDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTP 176
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ +E V+D +D++LIM+VNPGFGGQ IES + KI + + +R ++ +EVDGGV
Sbjct: 177 LTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGP 236
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ LV GS+ F G YA+ + +K S
Sbjct: 237 KNAYKVIEAGANALVAGSAVF---GAPDYAEAIKGIKTS 272
>gi|221632631|ref|YP_002521852.1| ribulose-phosphate 3-epimerase [Thermomicrobium roseum DSM 5159]
gi|221155383|gb|ACM04510.1| ribulose-phosphate 3-epimerase [Thermomicrobium roseum DSM 5159]
Length = 235
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 138/217 (63%), Gaps = 7/217 (3%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL ADF L + + +AGA IH D+MDG FVPNISFG ++R++R + D H
Sbjct: 14 PSILNADFGHLAAVVRELDEAGADAIHLDIMDGRFVPNISFGLPIVRAVRDATTLPLDVH 73
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI + ++ A AG +T H E+ PH+ R+++ IH +G GVA+NP TP+A +E+
Sbjct: 74 LMIVEPERYLEAFAQAGASALTVHVETCPHLHRTIQAIHELGLLAGVALNPATPLAAIEE 133
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
++ +D++LIMTV+PGFGGQ LI + + K+R+ + ++ +R L VDGGV N++S+
Sbjct: 134 ILPFVDLVLIMTVDPGFGGQGLIPAVLGKLRRLRQMVDERGFRCLLSVDGGVKLSNLESV 193
Query: 187 VQAGADLLVVGSSFFN---QKGEISYAKRLNDLKKSA 220
+ AGAD++V GS F + GEI +RL + A
Sbjct: 194 ISAGADIVVTGSVLFTAEERPGEI--LRRLRERATQA 228
>gi|91790299|ref|YP_551251.1| ribulose-5-phosphate 3-epimerase [Polaromonas sp. JS666]
gi|91699524|gb|ABE46353.1| ribulose-5-phosphate 3-epimerase [Polaromonas sp. JS666]
Length = 231
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 148/228 (64%), Gaps = 12/228 (5%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG + ++L+ ++
Sbjct: 7 PTYRIAPSILSADFARLGAELETVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPHAK 66
Query: 63 SV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
D HLM+ +D+ ADAG D+I+FHPE+S H+ RS++ I A G K G+
Sbjct: 67 KADGSAVPIDVHLMVQPVDALAAAFADAGADLISFHPEASGHVHRSVQAIKARGCKAGLV 126
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEV 174
NP + + +L+ VID+ID+ILIM+VNPGFGGQ I+S + KI QA+ I R I LEV
Sbjct: 127 FNPASSMDVLDWVIDDIDLILIMSVNPGFGGQSFIDSALRKIEQARKRIDASGRDIRLEV 186
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGG+ + NI + AGAD V GS+ F G+ Y K + D ++ALA
Sbjct: 187 DGGIKTDNIARVAAAGADTFVAGSAIF---GKPDY-KAVIDAMRTALA 230
>gi|74318248|ref|YP_315988.1| ribulose-5-phosphate 3-epimerase [Thiobacillus denitrificans ATCC
25259]
gi|74057743|gb|AAZ98183.1| ribulose-phosphate 3-epimerase [Thiobacillus denitrificans ATCC
25259]
Length = 227
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 130/206 (63%), Gaps = 3/206 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
+ +I PSIL+A+F+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 2 TYRIAPSILSANFARLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGVT 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ +D I A AG ITFHPE+S HI R++ I G K G+ NP TP
Sbjct: 62 APIDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHIDRTIGLIKENGCKAGLVFNPATP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
+ +LE +D++DM+L+M+VNPGFGGQ+ I + K R + +I R +SLE+DGGV
Sbjct: 122 LDVLEYTLDKLDMVLLMSVNPGFGGQKFIPYVLDKARAVRKMIDDRGLDVSLEIDGGVGP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGE 206
NI + +AG D V GS+ F E
Sbjct: 182 ANIAEVARAGVDTFVAGSAVFGAAKE 207
>gi|87124325|ref|ZP_01080174.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RS9917]
gi|86167897|gb|EAQ69155.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RS9917]
Length = 227
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 136/220 (61%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFARLGEEVKAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK+ G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKQAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ I++ + KIR + + + + +EVDGGV
Sbjct: 123 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRDLRRMCEAKGLDPWIEVDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ YA + ++ S
Sbjct: 183 GANAWKVIEAGANAIVSGSGVFNQP---DYAAAIEGIRNS 219
>gi|120609141|ref|YP_968819.1| ribulose-5-phosphate 3-epimerase [Acidovorax citrulli AAC00-1]
gi|326315322|ref|YP_004232994.1| ribulose-phosphate 3-epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|89111167|dbj|BAE80257.1| D-ribulose-5-phosphate 3-epimerase [Acidovorax avenae subsp.
avenae]
gi|89111200|dbj|BAE80289.1| D-ribulose-5-phosphate 3-epimerase [Acidovorax avenae subsp.
avenae]
gi|120587605|gb|ABM31045.1| ribulose-5-phosphate 3-epimerase [Acidovorax citrulli AAC00-1]
gi|323372158|gb|ADX44427.1| ribulose-phosphate 3-epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 226
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 138/211 (65%), Gaps = 8/211 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++FG V ++L+ +
Sbjct: 1 MTRQFRIAPSILSADFARLGEEVKNVIASGADWVHFDVMDNHYVPNLTFGPMVCQALKPH 60
Query: 61 S------DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM+ +D+ A+AG D I+FHP++S H+ RS++ I + G K G
Sbjct: 61 AVTPDGRPAPIDVHLMVQPVDALAAAFAEAGADYISFHPDASAHVHRSIQAITSKGIKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP P+ +L+ VID+ID+IL+M+VNPGFGGQ I+S + KI + I + I L
Sbjct: 121 LVFNPAAPLDVLDWVIDDIDLILVMSVNPGFGGQSFIDSALRKIEALRRRIDACGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
EVDGGV NI+ + AGAD V GS+ F +
Sbjct: 181 EVDGGVKVDNIRRVADAGADTFVAGSAIFGK 211
>gi|253580152|ref|ZP_04857419.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848671|gb|EES76634.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 223
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 129/199 (64%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+ PSIL+ADF+RLGE+I + K G + +H DVMDG FVP+ISFG VI+S+R S F
Sbjct: 3 QLCPSILSADFNRLGEQIKTLEKEGIEWLHIDVMDGDFVPSISFGMPVIKSIRKESKLFF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ + +I + G D IT H E+ + R++ I G K GV+I P TPV
Sbjct: 63 DVHLMVTEPERYIRDFVECGADSITVHAEACEDLERTIEQIREAGVKVGVSIKPATPVND 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+ ++ ++DM+LIMTV PGFGGQ+ +E KIR+ + LI + ++VDGG+ +
Sbjct: 123 ISHMLSDVDMVLIMTVQPGFGGQKYMEECTEKIREVRELIEAEDLDVDVQVDGGINDETM 182
Query: 184 KSLVQAGADLLVVGSSFFN 202
++++ AGA+LLV GS FN
Sbjct: 183 ETVLTAGANLLVAGSYVFN 201
>gi|282877777|ref|ZP_06286590.1| ribulose-phosphate 3-epimerase [Prevotella buccalis ATCC 35310]
gi|281300093|gb|EFA92449.1| ribulose-phosphate 3-epimerase [Prevotella buccalis ATCC 35310]
Length = 230
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 139/219 (63%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PS+L+ADF+ L ++ I ++ A +H DVMDG FVPNISFG VI ++
Sbjct: 3 NILISPSLLSADFTNLKSDVEMINRSEADWLHMDVMDGVFVPNISFGFPVISAVSKICKK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I A AG I++ E+ H+ R+++ IHA G K GV +NP TPV
Sbjct: 63 PLDVHLMIVQPERYIEQTAKAGAYIMSVQYEACTHLHRTIQQIHAAGMKAGVVLNPSTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTS 180
+LED+I ++D++L+M+VNPGFGGQ IE+TI K+++ + L+ G +++ +EVDGGV
Sbjct: 123 HLLEDIICDVDLVLLMSVNPGFGGQTFIENTINKVKRLRKLMDECGSKAL-IEVDGGVQG 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
LVQAGAD+LV GS F + + K+L L S
Sbjct: 182 ETAPRLVQAGADVLVSGSYVFKSEDPENTIKQLKSLSTS 220
>gi|71276385|ref|ZP_00652662.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Dixon]
gi|71898632|ref|ZP_00680802.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Ann-1]
gi|170729410|ref|YP_001774843.1| ribulose-phosphate 3-epimerase [Xylella fastidiosa M12]
gi|71162847|gb|EAO12572.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Dixon]
gi|71731579|gb|EAO33640.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Ann-1]
gi|167964203|gb|ACA11213.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa M12]
Length = 223
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 135/202 (66%), Gaps = 5/202 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY +
Sbjct: 6 IAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG +I+FH E+S H+ R+++ I + G G+ NP TPV +
Sbjct: 66 DVHLMVEPVDRIVPDFAQAGASMISFHIEASRHVHRTIQLIKSHGCMAGLVFNPATPVDM 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA---LIGKRSISLEVDGGVTSRN 182
L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + L+G R + LEVDGGV N
Sbjct: 126 LDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLG-RPVRLEVDGGVGIDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I ++ +AGAD V GS+ F+ +
Sbjct: 185 IGAIAEAGADTFVAGSAIFHAR 206
>gi|21241246|ref|NP_640828.1| ribulose-phosphate 3-epimerase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106561|gb|AAM35364.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 223
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPT-AIAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A+AG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFANAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDATGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIAQMRAAVDAV 222
>gi|304404149|ref|ZP_07385811.1| ribulose-phosphate 3-epimerase [Paenibacillus curdlanolyticus YK9]
gi|304347127|gb|EFM12959.1| ribulose-phosphate 3-epimerase [Paenibacillus curdlanolyticus YK9]
Length = 214
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 131/198 (66%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+A+FS+LGE++ + KAG IH DVMDG FVPN++FG V+ S+R Y+ FD
Sbjct: 4 IAPSILSANFSKLGEDVQSAEKAGGDWIHIDVMDGHFVPNLTFGPIVVESVRPYTKLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I AG D IT H E+ H+ R + I G GVAINP TP++ +
Sbjct: 64 VHLMIEKPELYIPAFVKAGADRITVHAEACVHLHRVVHLIKEHGLPAGVAINPGTPLSAV 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---SLEVDGGVTSRNI 183
E V+D++D++LIMTVNPGFGGQ I ++ +IRQ + ++ +R + +++VDGG+ +
Sbjct: 124 EPVLDDLDLVLIMTVNPGFGGQSFIPQSVGRIRQLRTMLQERGLEHMNVQVDGGMNAETA 183
Query: 184 KSLVQAGADLLVVGSSFF 201
K + AGA++LV GS +
Sbjct: 184 KLVRDAGANVLVAGSYVY 201
>gi|167630208|ref|YP_001680707.1| ribulose-5-phosphate 3-epimerase [Heliobacterium modesticaldum
Ice1]
gi|167592948|gb|ABZ84696.1| ribulose-5-phosphate 3-epimerase [Heliobacterium modesticaldum
Ice1]
Length = 220
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 129/205 (62%), Gaps = 10/205 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PSIL+ADF+ LG +++ + GA+ +H DVMDG FVPNI+ G V+ +LR S
Sbjct: 2 TIKIAPSILSADFANLGAQVAAVEAGGAEYLHIDVMDGHFVPNITIGPLVVAALRERSRM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + D +I AG D+IT H E+ H+ R+L I G + GVA+NP TP
Sbjct: 62 VFDTHLMIEAPDKYILDFIQAGADLITVHQEACVHLHRTLSLIKEKGARAGVALNPATPW 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI------RQAKALIGKRSISLEVDGG 177
L ++ +D++L+M+VNPGFGGQ+ I +PKI RQA+ L ++VDGG
Sbjct: 122 QSLSCILPMVDLVLVMSVNPGFGGQKFIAGALPKIEALARYRQAQGL----HYEIQVDGG 177
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V +VQAGAD+LV GS+ F
Sbjct: 178 VNRTTASQVVQAGADVLVAGSALFG 202
>gi|124023384|ref|YP_001017691.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9303]
gi|123963670|gb|ABM78426.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9303]
Length = 264
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ I PSIL+ADFSRLGE++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 40 TKSLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 99
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG D I E+ PH+ R+L I +GKK G +NP T
Sbjct: 100 SKPLDVHLMIVEPERYVGDFAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNPST 159
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ I++ + KIR + + ++ + +EVDGG+
Sbjct: 160 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRDLRRICDEQGLDPWIEVDGGIK 219
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ YA+ + ++ S
Sbjct: 220 ADNAWKVIEAGANAIVSGSGVFNQP---DYAEAIRGIRNS 256
>gi|73666682|ref|YP_302698.1| ribulose-5-phosphate 3-epimerase [Ehrlichia canis str. Jake]
gi|72393823|gb|AAZ68100.1| ribulose-5-phosphate 3-epimerase [Ehrlichia canis str. Jake]
Length = 222
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 138/211 (65%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SIL+ADF+ L + I + A IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 8 VEVSSSILSADFANLSKSIEVLENASVDYIHIDVMDGNFVPNITIGPVVVSAIRECTKIP 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+S ++I +AG D+IT H ES H+ R ++ I + GK G+++ P + +
Sbjct: 68 FDVHLMINSPSNYIETFVNAGADMITVHAESEVHLDRVIKKIKSYGKDAGLSLVPTSHYS 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
ILE +I E+D++LIMTVNPGF GQQ I S + KI + +++I K S+ + VDGGV N
Sbjct: 128 ILEYIIFELDLVLIMTVNPGFSGQQFIVSQLDKISRVRSMIEKYSLKTKIAVDGGVNIDN 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
KS+++AGAD+LVVGS+ F K + Y ++L
Sbjct: 188 AKSVIEAGADILVVGSAIFKAKNVLDYVQKL 218
>gi|326693792|ref|ZP_08230797.1| ribulose-phosphate 3-epimerase [Leuconostoc argentinum KCTC 3773]
Length = 218
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 137/214 (64%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+AD++ L ++ + AGA+ +H DVMDG FVP+IS+G + ++ LR +D V D
Sbjct: 5 IAPSILSADYTNLERDVKLVEAAGAEYLHIDVMDGNFVPSISYGPNWVKQLRPETDMVLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+++ + ++ ADAG DII H E++PHI R+L+ I G K V INP TPV +
Sbjct: 65 VHLMVTNPEKIVDEFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVLAI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E V+D +D +L+MTVNPGFGGQ+ + ST+ KI Q +A+ + ++VDGG+ +
Sbjct: 125 EPVLDMVDQVLVMTVNPGFGGQKFLPSTLEKIAQLRAVRDELGYDFDIQVDGGINDETVV 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA++ V GS +++ + RL L K
Sbjct: 185 AAYEAGANVFVAGSYVYDKVDPAAKIARLKALTK 218
>gi|303237252|ref|ZP_07323822.1| ribulose-phosphate 3-epimerase [Prevotella disiens FB035-09AN]
gi|302482639|gb|EFL45664.1| ribulose-phosphate 3-epimerase [Prevotella disiens FB035-09AN]
Length = 217
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L ++I I + + IH DVMDG FVPNISFG V++++ D
Sbjct: 5 VSPSLLSADFLHLDKDIEMINNSDSDYIHMDVMDGMFVPNISFGFPVLKAVGKACKKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI +++I ADAG +I+T H E+ PH+ R+++ I G K GVAINP TPV++L
Sbjct: 65 VHYMIMHPENYIQQTADAGAEIMTVHYETCPHLHRTIQQIKQAGMKAGVAINPATPVSVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+++++D++LIM+VNPGFGGQ IE+ I K+++ + LI + + +EVDGGV +
Sbjct: 125 EDIVEDVDLVLIMSVNPGFGGQSFIENAISKVKRLRKLIDESNSHALIEVDGGVQNETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+ G D+LV GS F I + L L
Sbjct: 185 RLVEVGTDILVSGSYVFKSANPIETIRGLKVL 216
>gi|33862842|ref|NP_894402.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9313]
gi|33634758|emb|CAE20744.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9313]
Length = 227
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADFSRLGE++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG D I E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 SKPLDVHLMIVEPERYVGDFAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ I++ + KIR+ + + ++ + +EVDGG+
Sbjct: 123 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRELRRICDEQGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ YA+ + ++ S
Sbjct: 183 ADNAWKVIEAGANAIVSGSGVFNQP---DYAEAIRGIRNS 219
>gi|313894840|ref|ZP_07828400.1| ribulose-phosphate 3-epimerase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976521|gb|EFR41976.1| ribulose-phosphate 3-epimerase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 255
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 137/199 (68%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+ LG ++ + +AGA +H DVMDG FVPN++ G+ V+ SLR S+ V
Sbjct: 43 IIIAPSILSADFANLGADVRRVEEAGADYLHIDVMDGTFVPNLTIGSCVVESLRKVSNLV 102
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ +++I+ A AG D ITFH E++ H R ++ I A G + GVA+NP T +
Sbjct: 103 FDVHLMVEHPETYIDSFARAGADNITFHVEATRHPHRLIQQIKAAGCRAGVALNPGTSIY 162
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
LE++ID++DM+L+MTVNPGFGGQ+ IE+ + KI + + ++++ VDGG+ +
Sbjct: 163 TLEELIDDLDMVLLMTVNPGFGGQKFIENMVGKIHALYHTVMENELNVDIAVDGGINAET 222
Query: 183 IKSLVQAGADLLVVGSSFF 201
+S+ AGA++LV GS+ +
Sbjct: 223 SESVRSAGANVLVAGSAVY 241
>gi|149012428|ref|ZP_01833459.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP19-BS75]
gi|168487120|ref|ZP_02711628.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|147763484|gb|EDK70420.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP19-BS75]
gi|183569967|gb|EDT90495.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|332072168|gb|EGI82654.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA41301]
Length = 218
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 139/216 (64%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP T V
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KG+++ +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVF--KGDVN--ERVQTLRKQ 216
>gi|78184803|ref|YP_377238.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9902]
gi|78169097|gb|ABB26194.1| ribulose-5-phosphate 3-epimerase [Synechococcus sp. CC9902]
Length = 221
Score = 185 bits (469), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 135/218 (61%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSIL+ADFS+LG E+ + KAGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 5 SLVVSPSILSADFSKLGAEVEAVDKAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTQK 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP TP+
Sbjct: 65 PLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLGQIKDLGKKAGAVLNPGTPL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L+ ++ D++LIM+VNPGFGGQ IE+ + KI + + R + +EVDGG+
Sbjct: 125 DTLDYCLELCDLVLIMSVNPGFGGQSFIENQVQKISDLRKMCDARGLDPWIEVDGGIKGS 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ YAK + ++ S
Sbjct: 185 NAWKVIEAGANAIVSGSGVFNQP---DYAKAIEGIRTS 219
>gi|284037427|ref|YP_003387357.1| ribulose-phosphate 3-epimerase [Spirosoma linguale DSM 74]
gi|283816720|gb|ADB38558.1| ribulose-phosphate 3-epimerase [Spirosoma linguale DSM 74]
Length = 223
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 136/218 (62%), Gaps = 2/218 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L ++ I ++ A +HFDVMDG FVPNISFG +++++ + D
Sbjct: 6 IAPSLLAADFANLQRDLDLINRSEADYLHFDVMDGVFVPNISFGFPLLKAVHEHCQKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+ G I H E+ H+ R+L I +G + GVA+NP TPV+ L
Sbjct: 66 VHLMITDPDRYLEAFAEGGASTIHVHYEACSHLHRTLSRIRELGCQAGVALNPHTPVSGL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
DV+++ID+ILIM+VNPGFGGQ I TI KI K + +EVDGGV+ N +
Sbjct: 126 VDVLEQIDVILIMSVNPGFGGQAFIPHTIQKIAGLKQFLQTNQCPALIEVDGGVSLSNAQ 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+L+ AGAD+LV GSS FN + +L + + ++A
Sbjct: 186 ALLNAGADMLVAGSSVFNAPDPLVAITQLKNSRLPSMA 223
>gi|227552682|ref|ZP_03982731.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX1330]
gi|257888650|ref|ZP_05668303.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,141,733]
gi|257897394|ref|ZP_05677047.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com12]
gi|293378846|ref|ZP_06625001.1| ribulose-phosphate 3-epimerase [Enterococcus faecium PC4.1]
gi|227178187|gb|EEI59159.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX1330]
gi|257824704|gb|EEV51636.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,141,733]
gi|257833959|gb|EEV60380.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com12]
gi|292642387|gb|EFF60542.1| ribulose-phosphate 3-epimerase [Enterococcus faecium PC4.1]
Length = 216
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + S ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKIAELADLRKENNWSYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKVCKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|331006536|ref|ZP_08329831.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC1989]
gi|330419658|gb|EGG94029.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC1989]
Length = 225
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 137/215 (63%), Gaps = 6/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+A+F+ LG E+ N+ AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 6 IAPSILSANFACLGAEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I++ ADAG ITFHP++S HI RSL+ I G K G+ +NP P+
Sbjct: 66 DVHLMVDPVDDLISMFADAGASYITFHPDASRHIDRSLQLIKQKGCKAGLVLNPAVPIDG 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ V+ ++DM+L+M+VNPGFGGQ+ I T+ K+R+A+A I + LE+DGGVT NI
Sbjct: 126 IRHVLPQLDMLLLMSVNPGFGGQKFIPYTLDKLREARAAIDALGLDTRLEIDGGVTVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGAD V GS+ F G Y + + +++
Sbjct: 186 AEIAAAGADTFVAGSAIF---GSEDYQQTITAMRE 217
>gi|293572648|ref|ZP_06683616.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E980]
gi|291607234|gb|EFF36588.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E980]
Length = 216
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + S ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKITELADLRKENNWSYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|313888437|ref|ZP_07822104.1| ribulose-phosphate 3-epimerase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845466|gb|EFR32860.1| ribulose-phosphate 3-epimerase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 214
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 134/199 (67%), Gaps = 2/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+ L +EI + + +H D+MDG +VPNIS+G +++SLR +D FD
Sbjct: 2 ISPSLLSADFTNLEKEIKILKEEKVDFLHLDIMDGNYVPNISYGPGIVKSLRPLTDIPFD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI ++ I +AG DIIT HP ++ H+ R+L I + G K G+A+NP + +L
Sbjct: 62 THLMIERPENFIEDFKNAGSDIITIHPSTTKHLDRTLSLIKSHGMKAGLALNPSDSLEVL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ +D++D++L+M+VNPGFGGQ+ I S + KI + K +I +R++ +EVDGGV N K
Sbjct: 122 DYTLDKLDLVLVMSVNPGFGGQKFIPSALRKISEVKKMIEERNLKTLIEVDGGVKLDNAK 181
Query: 185 SLVQAGADLLVVGSSFFNQ 203
++ AGAD+LV GS+ F +
Sbjct: 182 EVLAAGADILVAGSAIFQK 200
>gi|289669431|ref|ZP_06490506.1| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 223
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P++ I PSIL+ADF+RLGEE++N+ AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTV-IAPSILSADFARLGEEVNNVLNAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A+AG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFAEAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIEQMRAAVDAV 222
>gi|289449539|ref|YP_003475431.1| ribulose-phosphate 3-epimerase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184086|gb|ADC90511.1| ribulose-phosphate 3-epimerase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 240
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 136/199 (68%), Gaps = 3/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q PSIL+ADF++LG I + A IH D+MDG FVPN++FG +++++R+YS F
Sbjct: 13 QFCPSILSADFAKLGTVIQQLDGV-AHWIHVDIMDGHFVPNLTFGVPIVKAIRAYSQLPF 71
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM++ +I ++ AG D +T H E+ PH+ R ++ I + G GVA+NP TPV++
Sbjct: 72 DCHLMVTDPMDYIEGLSAAGADGMTVHLEACPHLHRVVQAIKSAGMSAGVALNPATPVSL 131
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L D++ ++D++L+M+VNPGFGGQ+ I + KI+ +++I + ++ +EVDGG+ NI
Sbjct: 132 LTDILPDLDLVLLMSVNPGFGGQKFIPQVMRKIKNLRSMIDREGLNVHIEVDGGIGLANI 191
Query: 184 KSLVQAGADLLVVGSSFFN 202
++ +AGAD +V GS+ F
Sbjct: 192 DAVYRAGADAMVAGSAVFG 210
>gi|320530193|ref|ZP_08031263.1| ribulose-phosphate 3-epimerase [Selenomonas artemidis F0399]
gi|320137626|gb|EFW29538.1| ribulose-phosphate 3-epimerase [Selenomonas artemidis F0399]
Length = 255
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 137/199 (68%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+ LG ++ + +AGA +H DVMDG FVPN++ G+ V+ SLR S+ V
Sbjct: 43 IIIAPSILSADFANLGADVRRVEEAGADYLHIDVMDGTFVPNLTIGSCVVESLRKVSNLV 102
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ +++I+ A AG D ITFH E++ H R ++ I A G + GVA+NP T +
Sbjct: 103 FDVHLMVEHPETYIDSFARAGADNITFHVEATRHPHRLIQQIKAAGCRAGVALNPGTSIY 162
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
LE++ID++DM+L+MTVNPGFGGQ+ IE+ + KI + + ++++ VDGG+ +
Sbjct: 163 TLEELIDDLDMVLLMTVNPGFGGQKFIENMVGKIHALYHTVMENELNVDIAVDGGINAET 222
Query: 183 IKSLVQAGADLLVVGSSFF 201
+S+ AGA++LV GS+ +
Sbjct: 223 SESVRSAGANVLVAGSAVY 241
>gi|242237798|ref|YP_002985979.1| ribulose-phosphate 3-epimerase [Dickeya dadantii Ech703]
gi|242129855|gb|ACS84157.1| ribulose-phosphate 3-epimerase [Dickeya dadantii Ech703]
Length = 225
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 136/206 (66%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ KAGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKPFL-IAPSILSADFARLGEDTEKALKAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITAPVDVHLMVKPVDRLIPDFAQAGANFITFHPEASEHVDRTLQLIRDNGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + I G I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPATLDKLRQVRRRIDDGGYDIHLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V NI + AGAD+ V GS+ F Q
Sbjct: 180 VKVDNIADIAAAGADMFVAGSAIFGQ 205
>gi|170019678|ref|YP_001724632.1| ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|169754606|gb|ACA77305.1| Ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
Length = 214
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 136/204 (66%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSI AD RL +EI + + + +H D+MDG +V NI+FG + I +++ S +F
Sbjct: 3 KILPSIFGADILRLKDEIHFLEEEQTEILHVDLMDGTYVSNIAFGPNQIAAMKKASSMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + HI+ + + G ++I+ H ES+PH+ ++ I G+K GV +NP TP ++
Sbjct: 63 DVHMMLANPERHIDDVINTGAEMISVHYESTPHVHYIIQKIKKAGRKAGVVLNPGTPESV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E ++D+ID IL+MT+NPG GQ I ++ KIR K +I + I +EVDGGV N+K
Sbjct: 123 IEYLLDDIDYILLMTINPGQPGQTFIHKSLEKIRNTKKMISGKDIQIEVDGGVNLDNVKQ 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+ +AGADL+VVG + FN++ SY
Sbjct: 183 VKEAGADLIVVGGALFNKQPRESY 206
>gi|114566749|ref|YP_753903.1| ribulose-phosphate 3-epimerase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337684|gb|ABI68532.1| ribulose-5-phosphate 3-epimerase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 218
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 134/217 (61%), Gaps = 2/217 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F+ LGE+I + +AGA +H DVMDG FVPN++ G V+ +RS S
Sbjct: 2 ILVAPSILSANFTHLGEDIRKVEEAGADWLHIDVMDGHFVPNLTIGPQVVADIRSRSKLF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ +S I + +AG D++T H ES PH+ R + I G K GVA+NP + +
Sbjct: 62 FDVHLMVEKPESLIAVFVEAGADLLTVHYESCPHLHRVVHMIKDAGIKAGVALNPASSIM 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+LE++I E+D++L+M+VNPGFGGQ I + KI +A+ L+ L+VDGG+
Sbjct: 122 LLENIISELDLLLLMSVNPGFGGQSFIPGVLDKITKARKLLESTGSPAYLQVDGGINLET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +V+AG ++LV GS F K L +L S
Sbjct: 182 ARQVVEAGCNVLVAGSYVFKSPEPGEAVKSLKNLGSS 218
>gi|194476747|ref|YP_002048926.1| ribulose-phosphate 3-epimerase [Paulinella chromatophora]
gi|171191754|gb|ACB42716.1| ribulose-phosphate 3-epimerase [Paulinella chromatophora]
Length = 222
Score = 184 bits (468), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 140/220 (63%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ I PSIL+ADFSRLGE++ + KAGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKSLMISPSILSADFSRLGEDVVAVDKAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 63 KKPLDVHLMIIEPERYVADFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
++ L+ ++ D++LIM+VNPGFGGQ I+S + KIR+ + + +R + +EVDGGV
Sbjct: 123 SLSSLDYCLELCDLVLIMSVNPGFGGQSFIDSQVNKIRELRRICDERGLDPWIEVDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS F+Q +YA+ + ++ S
Sbjct: 183 GSNAWKVIEAGANAIVSGSGIFSQS---NYAEAIQGIRNS 219
>gi|289663842|ref|ZP_06485423.1| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 223
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P++ I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTV-IAPSILSADFARLGEEVDNVLNAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A+AG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFAEAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAP---DYAQVIEQMRAAVDAV 222
>gi|297544777|ref|YP_003677079.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842552|gb|ADH61068.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 216
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 137/200 (68%), Gaps = 5/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F+ L E++ I K A +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKIAPSILSANFANLLEDVKKIEK-DADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSIP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I ++G DIIT H E+ H+ R+++ I + GKK GV++NP TP+
Sbjct: 60 FDVHLMIENPDLYIENFVNSGADIITVHQEACIHLHRTIQKIKSYGKKAGVSLNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
++ V+ +IDM+LIMTVNPGFGGQ+ I+S + KI + K + +G + +EVDGG+
Sbjct: 120 SIKYVLQDIDMVLIMTVNPGFGGQKFIDSMLKKIEEIKKMREDLG-LNFEIEVDGGINLY 178
Query: 182 NIKSLVQAGADLLVVGSSFF 201
N+K +V+AG D++V GSS F
Sbjct: 179 NVKEVVEAGTDIIVAGSSIF 198
>gi|332524028|ref|ZP_08400280.1| putative ribulose-phosphate 3-epimerase [Streptococcus porcinus
str. Jelinkova 176]
gi|332315292|gb|EGJ28277.1| putative ribulose-phosphate 3-epimerase [Streptococcus porcinus
str. Jelinkova 176]
Length = 214
Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 130/206 (63%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI AD L +EI + + +H D+MDG FV NI+FG + I++++ S +F
Sbjct: 3 QILPSIFGADLLHLQKEIDFLESRNTQILHVDLMDGNFVNNIAFGPNQIKAMKEASVMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + HI+ + D G ++I+ H ES+PH+ ++ I G+K GV INP TP +
Sbjct: 63 DVHMMLKEPEKHIDDVIDTGAEMISVHYESTPHVHSVIQKIKKAGRKAGVVINPGTPETV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L ++D+ID ILIMT+NPG GQ I +I KI+ K LIG R I +EVDGGV K
Sbjct: 123 LTYLLDDIDYILIMTINPGQPGQSFITKSIDKIKATKQLIGSRPIQIEVDGGVNKEIAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAK 211
+AGADL+VVG + F+ E SY++
Sbjct: 183 CKEAGADLIVVGGALFSDNREASYSE 208
>gi|289578501|ref|YP_003477128.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter italicus Ab9]
gi|289528214|gb|ADD02566.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter italicus Ab9]
Length = 216
Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 137/200 (68%), Gaps = 5/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F+ L E++ I K A +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKIAPSILSANFANLLEDVKKIEK-DADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSIP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I ++G DIIT H E+ H+ R+++ I + GKK GV++NP TP+
Sbjct: 60 FDVHLMIENPDLYIEDFVNSGADIITVHQEACIHLHRTIQKIKSYGKKAGVSLNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
++ V+ +IDM+LIMTVNPGFGGQ+ I+S + KI + K + +G + +EVDGG+
Sbjct: 120 SIKYVLQDIDMVLIMTVNPGFGGQKFIDSMLKKIEEIKKMREDLG-LNFEIEVDGGINLY 178
Query: 182 NIKSLVQAGADLLVVGSSFF 201
N+K +V+AG D++V GSS F
Sbjct: 179 NVKEVVEAGTDIIVAGSSIF 198
>gi|254423519|ref|ZP_05037237.1| ribulose-phosphate 3-epimerase [Synechococcus sp. PCC 7335]
gi|196191008|gb|EDX85972.1| ribulose-phosphate 3-epimerase [Synechococcus sp. PCC 7335]
Length = 233
Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 141/217 (64%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRLGEEI + KAGA IH DVMDG FVPNI+ G ++ ++R +++ D
Sbjct: 12 ISPSILSADFSRLGEEIRAVDKAGADWIHVDVMDGRFVPNITIGPMIVDAVRPHTEKPLD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP T +
Sbjct: 72 VHLMIVEPEKYVEDFAKAGADIISVHCEHNASPHLHRTLGQIKELGKQAGVVLNPGTNLD 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E ++ D+ILIM+VNPGFGGQ I + K+++ +A+ +R + +EVDGG+ S N
Sbjct: 132 MIEYSLELCDLILIMSVNPGFGGQSFIPGMVSKVQKLRAMCDERGLDPWIEVDGGLKSHN 191
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 192 TWQVLEAGANAIVAGSAVFKAD---DYAEAIESIRNS 225
>gi|333029264|ref|ZP_08457325.1| ribulose-phosphate 3-epimerase [Bacteroides coprosuis DSM 18011]
gi|332739861|gb|EGJ70343.1| ribulose-phosphate 3-epimerase [Bacteroides coprosuis DSM 18011]
Length = 216
Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+A+F+ L ++ I ++ A +H D+MDG FVPNISFG V++ + +D D
Sbjct: 5 ISPSILSANFANLAADMKMINESEADWVHIDIMDGVFVPNISFGFPVLKYVAELTDKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I + D G +I+ H E+ PH+ R ++ I G K V INP TPV++L
Sbjct: 65 VHLMIVQPEKFIQEVKDLGAEIMNVHYEACPHLHRVIQQIKEAGMKPAVTINPATPVSLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+D+I ++ M+LIM+VNPGFGGQ+ IE+ I K+++ KALI + + +EVDGGV K
Sbjct: 125 KDIIKDVHMVLIMSVNPGFGGQKFIENAINKVKELKALIKESGSNAMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFF 201
L++AGAD+LV GS+ F
Sbjct: 185 RLIEAGADVLVAGSAIF 201
>gi|260063688|ref|YP_003196768.1| ribulose-phosphate 3-epimerase [Robiginitalea biformata HTCC2501]
gi|88783133|gb|EAR14306.1| ribulose-phosphate 3-epimerase [Robiginitalea biformata HTCC2501]
Length = 220
Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 129/197 (65%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF L + + + ++ A H DVMDG FVPNIS+G VI+++ ++ D
Sbjct: 6 IAPSLLAADFGNLQQAVEMVEQSQAGWHHIDVMDGLFVPNISYGMPVIQAIGKHASKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I+ AD G +T H E+ H+ RSL+ I G K GVA+NP +PV++L
Sbjct: 66 VHLMIVDPDRYIDTFADLGAATLTVHLEACTHLHRSLQRIRDAGMKAGVALNPHSPVSLL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+V + D++L+M+VNPGFGGQ IE+T KI + + L+ +R+ +EVDGGVT N
Sbjct: 126 SEVAEMADLVLVMSVNPGFGGQSFIENTYRKIEELRKLLSERNSQALIEVDGGVTLENAH 185
Query: 185 SLVQAGADLLVVGSSFF 201
+LV AGAD+LV GS+ F
Sbjct: 186 ALVAAGADVLVAGSTVF 202
>gi|241763216|ref|ZP_04761274.1| Ribulose-phosphate 3-epimerase [Acidovorax delafieldii 2AN]
gi|241367606|gb|EER61883.1| Ribulose-phosphate 3-epimerase [Acidovorax delafieldii 2AN]
Length = 227
Score = 184 bits (467), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/230 (45%), Positives = 149/230 (64%), Gaps = 12/230 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++L+ +
Sbjct: 1 MSRTFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTFGPMVCQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLMI +D+ ADAG D I+FHP++S H+ RS++ I A G K G
Sbjct: 61 AKTPAGVPVPVDVHLMIQPVDALAAAFADAGADYISFHPDASGHVHRSIQAIRAKGVKPG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP P+ +L+ VI++ID+ILIM+VNPGFGGQ I+S + KI + I + I L
Sbjct: 121 LVFNPAEPLDVLDWVIEDIDLILIMSVNPGFGGQSFIDSALRKIESVRKRIDACGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
EVDGGV + NI+ + AGAD V GS+ F G+ YA + + + ALA
Sbjct: 181 EVDGGVKADNIRRVADAGADTFVAGSAIF---GKPDYASVIKAM-RGALA 226
>gi|288926485|ref|ZP_06420405.1| ribulose-phosphate 3-epimerase [Prevotella buccae D17]
gi|315608679|ref|ZP_07883659.1| ribulose-phosphate 3-epimerase [Prevotella buccae ATCC 33574]
gi|288336776|gb|EFC75142.1| ribulose-phosphate 3-epimerase [Prevotella buccae D17]
gi|315249648|gb|EFU29657.1| ribulose-phosphate 3-epimerase [Prevotella buccae ATCC 33574]
Length = 218
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 135/213 (63%), Gaps = 4/213 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L+A+F L ++ I ++ A +H DVMDG FVPNISFG V+ ++ Y D H
Sbjct: 7 PSLLSANFIDLKSDVEMINRSEADWLHLDVMDGVFVPNISFGFPVMEAVGKYCTKPLDVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
MI + +I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV +LED
Sbjct: 67 FMIVHPEHYIEQTAKLGAMMMNVHYEACIHLHRTIQQIHAAGMKAGVTLNPSTPVGVLED 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNIKS 185
VI ++DM+LIM+VNPGFGGQ+ IE+TI K+++ + LI G ++ +EVDGGV +
Sbjct: 127 VIRDVDMVLIMSVNPGFGGQKFIENTIRKVQRLRKLIDETGSHAL-IEVDGGVQAETAPL 185
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV+AG D+LV GS F +S K L +LK+
Sbjct: 186 LVRAGVDVLVSGSYIFKNIDPVSCIKALKELKR 218
>gi|304383969|ref|ZP_07366425.1| ribulose-phosphate 3-epimerase [Prevotella marshii DSM 16973]
gi|304334861|gb|EFM01135.1| ribulose-phosphate 3-epimerase [Prevotella marshii DSM 16973]
Length = 218
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF RL EI I ++ A +H DVMDG FVPNISFG V+ ++ D
Sbjct: 5 ISPSLLSADFLRLESEIDMINRSEADWLHLDVMDGVFVPNISFGFPVMEAVSKQCKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IH+ G + GVA+NP TPV L
Sbjct: 65 VHFMIVHPEHYIAQTAKLGAMMMCVHAEACTHLHRTVQEIHSAGMRAGVALNPATPVVSL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED++ ++DM+L+M+VNPGFGGQQ IE+TI KI + + LI ++ +EVDGGV
Sbjct: 125 EDIVKDVDMVLLMSVNPGFGGQQFIENTIEKIGRLRELIHQKGSHALIEVDGGVQEETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV+AGAD+LV GS F + +L L++
Sbjct: 185 RLVKAGADVLVSGSYLFRSADPAATISKLKHLER 218
>gi|20807941|ref|NP_623112.1| Pentose-5-phosphate-3-epimerase [Thermoanaerobacter tengcongensis
MB4]
gi|20516511|gb|AAM24716.1| Pentose-5-phosphate-3-epimerase [Thermoanaerobacter tengcongensis
MB4]
Length = 216
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +++ I + A +H DVMDG FVPNI+ G+ V+++LR Y+
Sbjct: 1 MKIAPSILSADFANLLQDVKEIEE-DADLLHIDVMDGHFVPNITIGSVVVKALRQYTSLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I AG DIIT H E+ H+ R+++ I K GVA+NP TP+
Sbjct: 60 FDVHLMIENPDLYIEDFVKAGADIITVHQEACVHLHRTIQRIKGHEVKAGVALNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ +D++L+MTVNPGFGGQ+ I+S + KI++ + + ++S +EVDGG+ +N
Sbjct: 120 TLKYILEYVDLVLVMTVNPGFGGQKFIDSMLKKIKELDEMRKEMNLSFEIEVDGGINIKN 179
Query: 183 IKSLVQAGADLLVVGSSFFN 202
IK +V+AGAD++V GS+ F
Sbjct: 180 IKQVVEAGADIIVAGSAIFE 199
>gi|110597091|ref|ZP_01385380.1| ribulose-phosphate 3-epimerase [Chlorobium ferrooxidans DSM 13031]
gi|110341282|gb|EAT59747.1| ribulose-phosphate 3-epimerase [Chlorobium ferrooxidans DSM 13031]
Length = 221
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 140/217 (64%), Gaps = 2/217 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S + PSIL+ADF+ L I+ AGA+ IH D+MDG FVPNI+FG +++++ S +
Sbjct: 5 STLLAPSILSADFTDLRSSIAIAENAGAEWIHCDIMDGNFVPNITFGPFIVQAIASCTSM 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ D HLMI++ D +I AG IT H E+ PH+ R+++ I ++G K GV+INP TPV
Sbjct: 65 IIDTHLMIAAPDRYIEEFVKAGSHQITVHQEACPHLHRTIQFIKSLGAKAGVSINPGTPV 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+ LE ++ ++D++L+M+VNPGFGGQ+ I S+I KIR+ + + + + +DGG+T
Sbjct: 125 STLESILPDLDLVLLMSVNPGFGGQKFIPSSIGKIRELHNMRTRINPELVIAIDGGITED 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N + +V AGAD L+ G++FF A ++ L +
Sbjct: 185 NAQEVVSAGADALIAGTAFFKAANPAETAAKIRALTR 221
>gi|318041352|ref|ZP_07973308.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CB0101]
Length = 227
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 137/220 (62%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADFSRLG+++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFSRLGDDVRAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ H+ R+L I +GK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVADFAKAGADIISVQVEACTHLHRNLAQIKDLGKMAGAVLNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++L+M+VNPGFGGQ IE+ + KIR + + +R + +EVDGG+
Sbjct: 123 PIDTLEYCLELCDLVLVMSVNPGFGGQSFIENQVQKIRDLRRMCDERGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ SYA + ++ S
Sbjct: 183 AENAWKVIEAGANAIVSGSGVFNQP---SYADAITGIRNS 219
>gi|57238786|ref|YP_179922.1| ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578711|ref|YP_196923.1| ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str.
Welgevonden]
gi|58616773|ref|YP_195972.1| ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str. Gardel]
gi|57160865|emb|CAH57767.1| ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str.
Welgevonden]
gi|58416385|emb|CAI27498.1| Ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str. Gardel]
gi|58417337|emb|CAI26541.1| Ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str.
Welgevonden]
Length = 215
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 136/214 (63%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SIL+ADF+ LG+ + +T AG IH DVMDG FV NI+ G VI ++R Y+
Sbjct: 2 VEISGSILSADFANLGKSVEMLTVAGVDYIHVDVMDGSFVSNITIGPVVISAIRQYTKIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ ++I DAG DIIT H ES H+ ++ I A GK G+++ P +
Sbjct: 62 FDVHLMINASSNYIENFVDAGADIITIHAESEVHLDGVIKKIKAYGKSAGISLVPTSHHN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
ILE +I ++D++L+MTVNPGFGGQ+ I S + KI + +I K S++ + VDGGV N
Sbjct: 122 ILEYIICDLDLVLVMTVNPGFGGQRFITSQLNKISSIRNIIQKYSLNTKIAVDGGVNIEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K ++ AGAD+LV+GS+ F Y K+L L
Sbjct: 182 AKDIIDAGADILVIGSALFKSNNMSEYIKQLKSL 215
>gi|302790491|ref|XP_002977013.1| hypothetical protein SELMODRAFT_228435 [Selaginella moellendorffii]
gi|302797983|ref|XP_002980752.1| hypothetical protein SELMODRAFT_154018 [Selaginella moellendorffii]
gi|300151758|gb|EFJ18403.1| hypothetical protein SELMODRAFT_154018 [Selaginella moellendorffii]
gi|300155491|gb|EFJ22123.1| hypothetical protein SELMODRAFT_228435 [Selaginella moellendorffii]
Length = 283
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 139/217 (64%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ SLR +D D
Sbjct: 62 VSPSILSANFSKLGEQVKAVEAAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPVTDLPLD 121
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI + + A AG DII+ H E S+ H+ R++ I +G K GV +NP TP+
Sbjct: 122 VHLMIVEPEQRVPDFAKAGADIISVHCENASTIHLHRTINQIKDLGCKAGVVLNPATPLG 181
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V++ +D++LIM+VNPGFGGQ IES + KI K L ++ ++ +EVDGGVT N
Sbjct: 182 AIEYVLEVVDLVLIMSVNPGFGGQSFIESQVKKISDLKRLCAEKGVNPWIEVDGGVTPSN 241
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+++AGA+ +V GS+ F K SY++ + +K S
Sbjct: 242 AYKVIEAGANAVVAGSAVFGAK---SYSEAIKGIKTS 275
>gi|166032711|ref|ZP_02235540.1| hypothetical protein DORFOR_02426 [Dorea formicigenerans ATCC
27755]
gi|166027068|gb|EDR45825.1| hypothetical protein DORFOR_02426 [Dorea formicigenerans ATCC
27755]
Length = 220
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 135/198 (68%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LGE++ GAK +HFDVMDG FVP+ISFG V++S+ + +D V D
Sbjct: 5 LAPSILSADFKVLGEQMKLTEDNGAKYLHFDVMDGMFVPSISFGMPVLKSIHNATDQVMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ +AG DI+T H E+ + ++ I G K G++I PETPV+ +
Sbjct: 65 AHLMVQEPIRYVEAFKEAGADIVTIHLEACEDVNATIAKIRECGMKVGLSICPETPVSKV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
E+++ +IDM+LIM+V+PGFGGQ+ I ++ KIR+A+ +I + S+ ++VDGG+ N+K
Sbjct: 125 ENLLKDIDMLLIMSVHPGFGGQKFIPESLDKIREARKMITDQGLSVDIQVDGGIYQTNVK 184
Query: 185 SLVQAGADLLVVGSSFFN 202
++ AGA+++V GS+ F
Sbjct: 185 EVLDAGANIIVAGSAVFK 202
>gi|220931841|ref|YP_002508749.1| Ribulose-phosphate 3-epimerase [Halothermothrix orenii H 168]
gi|219993151|gb|ACL69754.1| Ribulose-phosphate 3-epimerase [Halothermothrix orenii H 168]
Length = 217
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 144/220 (65%), Gaps = 7/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PSIL+ADFS L EE++ + +A +H DVMDG FVPNI+ G +I+S+R ++D
Sbjct: 2 VEFAPSILSADFSNLKEEVARVKEAN--YLHLDVMDGMFVPNITIGPGIIKSIRKHTDLK 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I A+AG DIIT H E++ H+ R + I G GVA+NP T +
Sbjct: 60 FDTHLMIEEPERYIKDFAEAGSDIITVHCEATKHLHRLIYQIKDQGCLAGVALNPATSLT 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+E V+ ++D++LIM+VNPGFGGQ+LI T+ KI+ K I + SI +E+DGG+ + N
Sbjct: 120 RIEHVLKDLDLVLIMSVNPGFGGQKLIPETLNKIKTIKQKIRELNLSIKVEIDGGINNSN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+K + + G D++V GS+ F G+ K L++LK+ ++
Sbjct: 180 VKDVSRTGVDIIVAGSAIF---GQPDPGKALSELKERVIS 216
>gi|325981250|ref|YP_004293652.1| ribulose-phosphate 3-epimerase [Nitrosomonas sp. AL212]
gi|325530769|gb|ADZ25490.1| ribulose-phosphate 3-epimerase [Nitrosomonas sp. AL212]
Length = 225
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+A+F++LG+E++++ +GA +HFDVMD +VPN++ G V ++R +D++
Sbjct: 3 RLAPSILSANFAKLGQEVTDVIDSGADIVHFDVMDNHYVPNLTIGPLVCEAIRPVTDAII 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +II+FHPE+S HI R++ I G K G+ NP TP+
Sbjct: 63 DVHLMVQPVDRIIPDFAKAGANIISFHPEASNHIDRTIGLIKEQGCKAGLVFNPATPLHY 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D++LIM+VNPGFGGQ I + K+R + I + I LE+DGGV NI
Sbjct: 123 LDHVLDKLDLVLIMSVNPGFGGQTFIPEALNKLRAVRKRIDASGKDIMLEIDGGVKVDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGAD V GS+ + Q G+ + R + +
Sbjct: 183 AEIARAGADTFVAGSAVY-QAGKDADPHRYDSI 214
>gi|158334572|ref|YP_001515744.1| ribulose-phosphate 3-epimerase [Acaryochloris marina MBIC11017]
gi|158304813|gb|ABW26430.1| ribulose-phosphate 3-epimerase [Acaryochloris marina MBIC11017]
Length = 235
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 138/220 (62%), Gaps = 7/220 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+ADFSRLGEE+ + KAGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 9 STVISPSILSADFSRLGEEVRAVDKAGADWIHVDVMDGRFVPNITIGPLIVDALRPVTQK 68
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPET 121
D HLMI D ++ A AG DII+ H E+S H+ R+L I +GK GV +NP T
Sbjct: 69 PLDVHLMIVEPDRYVADFAKAGADIISVHAEASATTHLHRALGQIKELGKMAGVVLNPGT 128
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ ++ V++ D++LIM+VNPGFGGQ I +PKIRQ + + +R + +EVDGG+
Sbjct: 129 SLEQIDYVLELCDLVLIMSVNPGFGGQSFIPGVLPKIRQLRQMCDERGLDPWIEVDGGLK 188
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 189 ANNTWQVLEAGANAIVAGSAVFKAD---DYAETIKAIRNS 225
>gi|254362201|ref|ZP_04978316.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica PHL213]
gi|153093773|gb|EDN74712.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica PHL213]
Length = 225
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLG++++ + KAGA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 8 IAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHYVPNLTFGPAICKALRDYGIQCPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ I A AG D ITFHPE++ HI R+L+ I +G K+G+ NP TP++
Sbjct: 68 DVHLMVKPVERLIPDFAKAGADYITFHPEATEHIDRNLQLIRDLGCKSGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D++L+M+VNPGFGGQ I ST+ K+++ + I + +I LEVDGGV NI
Sbjct: 128 LDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKLKEVRRRIDESGYNIRLEVDGGVKINNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ F+Q
Sbjct: 188 ADIAAAGADMFVAGSAIFDQ 207
>gi|87302820|ref|ZP_01085631.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 5701]
gi|87282703|gb|EAQ74661.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 5701]
Length = 227
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 130/203 (64%), Gaps = 2/203 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLG+E+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVIAPSILSADFARLGDEVRAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG D I E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 SKPLDVHLMIVEPERYVGDFAKAGADHIYVQVEACPHLHRNLGQIKDLGKKAGAVLNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ I S + K+R+ + + +R + +EVDGG+
Sbjct: 123 PLETLEYCLELCDLVLIMSVNPGFGGQSFIPSAVEKVRRLRRMCDERGLDPWIEVDGGLK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ N +V+AGA+ +V GS+ FN
Sbjct: 183 ANNTWQVVEAGANAIVAGSAVFN 205
>gi|223998756|ref|XP_002289051.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976159|gb|EED94487.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 263
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 131/200 (65%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+A+F++LGEE+ N+ +AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 41 IAPSILSANFAKLGEEVDNMLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPI 100
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D+ I DAG ITFHPE++ HI RSL+ I G K G+ NP T +
Sbjct: 101 DVHLMVSPVDAAIGDFIDAGASYITFHPEATNHIDRSLQLIRNGGCKAGLVFNPATSLDY 160
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
V D++D+IL+M+VNPGFGGQ I +T+ K R A+ I + + LE+DGGV NI
Sbjct: 161 AHHVKDKLDIILLMSVNPGFGGQAFIPATLDKARAARKFIDENGLDCRLEIDGGVKVDNI 220
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K + +AG D++V GS+ +
Sbjct: 221 KEVAEAGVDMMVAGSAILKE 240
>gi|300173587|ref|YP_003772753.1| ribulose-phosphate 3-epimerase [Leuconostoc gasicomitatum LMG
18811]
gi|299887966|emb|CBL91934.1| ribulose-phosphate 3-epimerase [Leuconostoc gasicomitatum LMG
18811]
Length = 218
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 137/215 (63%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+AD++ L ++ + AGA+ +H DVMDG FVP+IS+G ++ LR + + D
Sbjct: 5 IAPSILSADYTNLERDVKLVEAAGAEYLHIDVMDGNFVPSISYGPGWVKQLRPETKMMLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + + ++ ADAG DII H E++PHI R+L+ I G K V INP TPV +
Sbjct: 65 VHLMVMNPEKVVDEFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVLAI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSRNI 183
E V+D +D +L+MTVNPGFGGQ+ + STI KI Q KA+ +G + +E+DGGV + I
Sbjct: 125 ESVLDMVDQVLVMTVNPGFGGQKFLPSTIEKIAQLKAIREELGYK-FDIEIDGGVNNETI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA++ V GS +++ + L DL K
Sbjct: 184 TAAFEAGANVFVAGSYVYDKIDPTAKIATLKDLIK 218
>gi|168242811|ref|ZP_02667743.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194447623|ref|YP_002047009.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194405927|gb|ACF66146.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205338036|gb|EDZ24800.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 214
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 132/206 (64%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PS+ A+ RL EEI + + +H D+MDG +V NI+FG + I +++ S F
Sbjct: 3 QILPSVFGANILRLQEEIQFLETEKTEILHVDLMDGTYVSNIAFGPNQIAAMKKASSMTF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + HI+ + G ++I+ H ES+PH+ ++ I G+K GV +NP TP +
Sbjct: 63 DVHMMLANPERHIDDVIKTGAEMISVHYESTPHVHYIIQKIKKAGRKAGVVLNPGTPEHV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E ++D+ID +LIMT+NPG GQ IE ++ KIR K ++ R+I +EVDGGV + K
Sbjct: 123 IEYLLDDIDYVLIMTINPGQPGQTFIEKSLEKIRNTKKMVAGRNIQIEVDGGVNAEIAKK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAK 211
+ +AGADL+VVG + FN SY K
Sbjct: 183 VKEAGADLIVVGGALFNDAPRESYQK 208
>gi|37524112|ref|NP_927456.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36783535|emb|CAE12381.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 226
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 133/200 (66%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F+RLGE+ + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSANFARLGEDTDKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S HI RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAKAGATYITFHPETSEHIDRSLQLIKEHGCKAGLVFNPATPLSH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I + I LEVDGG+ + NI
Sbjct: 126 LDYVLDKLDIILLMSVNPGFGGQSFIPGTLEKLRQVRKIIDESGYDIRLEVDGGIKASNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ F+Q
Sbjct: 186 AAAATAGADMFVAGSAIFSQ 205
>gi|311280767|ref|YP_003942998.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae SCF1]
gi|308749962|gb|ADO49714.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae SCF1]
Length = 214
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 134/204 (65%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI A+ RL EEI + + +H D+MDG +V NI+FG + I +++ S +F
Sbjct: 3 QILPSIFGANILRLQEEIQFLEAEKTEILHVDLMDGTYVNNIAFGPNQIAAMKKASSMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + H++ + G ++I+ H ES+PH+ ++ I G++ GV +NP TP +
Sbjct: 63 DVHMMLANPERHVDDVIKTGAEMISVHYESTPHVHYIIQKIKQAGRQAGVVLNPGTPENV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E ++D+ID ILIMT+NPG GQ IE ++ KIR K ++ RSI +EVDGGV + K
Sbjct: 123 IEYLLDDIDYILIMTINPGQPGQTFIEKSLEKIRNTKKMVAGRSIKIEVDGGVNTDIAKK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+ +AGADL+VVG + FN+ + SY
Sbjct: 183 VKEAGADLIVVGGALFNKTPKESY 206
>gi|69245432|ref|ZP_00603427.1| Ribulose-phosphate 3-epimerase [Enterococcus faecium DO]
gi|257879843|ref|ZP_05659496.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,230,933]
gi|257886033|ref|ZP_05665686.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,501]
gi|257891684|ref|ZP_05671337.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,410]
gi|257894159|ref|ZP_05673812.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,408]
gi|258614270|ref|ZP_05712040.1| ribulose-phosphate 3-epimerase [Enterococcus faecium DO]
gi|260559516|ref|ZP_05831697.1| ribulose-phosphate 3-epimerase [Enterococcus faecium C68]
gi|261206667|ref|ZP_05921365.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TC 6]
gi|289565028|ref|ZP_06445482.1| ribulose-phosphate 3-epimerase [Enterococcus faecium D344SRF]
gi|293563690|ref|ZP_06678131.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1162]
gi|293570102|ref|ZP_06681182.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1071]
gi|294614912|ref|ZP_06694803.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1636]
gi|294618616|ref|ZP_06698155.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1679]
gi|314938226|ref|ZP_07845526.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133a04]
gi|314943123|ref|ZP_07849921.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133C]
gi|314949320|ref|ZP_07852662.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0082]
gi|314952254|ref|ZP_07855268.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133A]
gi|314992110|ref|ZP_07857560.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133B]
gi|314996292|ref|ZP_07861348.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133a01]
gi|68195814|gb|EAN10250.1| Ribulose-phosphate 3-epimerase [Enterococcus faecium DO]
gi|257814071|gb|EEV42829.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,230,933]
gi|257821889|gb|EEV49019.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,501]
gi|257828044|gb|EEV54670.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,410]
gi|257830538|gb|EEV57145.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,408]
gi|260074615|gb|EEW62936.1| ribulose-phosphate 3-epimerase [Enterococcus faecium C68]
gi|260079160|gb|EEW66853.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TC 6]
gi|289163235|gb|EFD11081.1| ribulose-phosphate 3-epimerase [Enterococcus faecium D344SRF]
gi|291587474|gb|EFF19358.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1071]
gi|291592198|gb|EFF23816.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1636]
gi|291595135|gb|EFF26473.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1679]
gi|291604374|gb|EFF33867.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1162]
gi|313589536|gb|EFR68381.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133a01]
gi|313593324|gb|EFR72169.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133B]
gi|313595596|gb|EFR74441.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133A]
gi|313598131|gb|EFR76976.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133C]
gi|313642422|gb|EFS07002.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133a04]
gi|313644269|gb|EFS08849.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0082]
Length = 216
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKITELADLRRENNWTYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|168014099|ref|XP_001759593.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689132|gb|EDQ75505.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+FS+LGE+I+ + KAG IH DVMDG FVPNI+ G V+ ++R +D
Sbjct: 70 IIVSPSILSANFSKLGEQITAVEKAGCDWIHVDVMDGRFVPNITIGPLVVDAIRPVTDLP 129
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP T
Sbjct: 130 LDVHLMIVEPEQRVPDFIKAGADIVSVHCENASTIHLHRTINQIKSLGAKAGVVLNPGTS 189
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+A +E V+D +D+ILIM+VNPGFGGQ IES + KIR + + ++ +EVDGGVT
Sbjct: 190 LAQIEYVLDCVDLILIMSVNPGFGGQSFIESQVKKIRDLRKMCEILGVNPWIEVDGGVTP 249
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N + +AGA+ LV GS+ F K YAK ++ +K S
Sbjct: 250 KNAYKVTEAGANALVAGSAVFGAK---DYAKAISGIKTS 285
>gi|121607581|ref|YP_995388.1| ribulose-phosphate 3-epimerase [Verminephrobacter eiseniae EF01-2]
gi|121552221|gb|ABM56370.1| ribulose-5-phosphate 3-epimerase [Verminephrobacter eiseniae
EF01-2]
Length = 226
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 139/211 (65%), Gaps = 8/211 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSILAADF+RLGEE+ + AGA IHFDVMD +VPN++ G V ++L+ +
Sbjct: 1 MSRKFRITPSILAADFARLGEELRAVIAAGADWIHFDVMDNHYVPNLTVGPMVCQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM++ +D+ ADAG D I+FHP++SPH+ RS++ I A G +TG
Sbjct: 61 AQTASGAAVPIDVHLMVAPVDALAAAFADAGADGISFHPDASPHVHRSIQAIRAKGIETG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP P+ +L+ VID+ID+ILIM VNPGFGGQ I+S + KI A+ I + I L
Sbjct: 121 LVFNPAEPLDVLDWVIDDIDLILIMGVNPGFGGQGFIDSALRKIEAARKRIAASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
+VDGG+ NI+ + AGAD V GS+ F Q
Sbjct: 181 QVDGGIKPDNIRRVADAGADTFVAGSAIFGQ 211
>gi|116782122|gb|ABK22378.1| unknown [Picea sitchensis]
Length = 292
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F+ LGE++ + AG +H DVMDG FVPNI+ G V+ +LR +D
Sbjct: 69 IIVSPSILSANFATLGEQVKAVELAGCDWVHVDVMDGRFVPNITIGPLVVAALRPVTDLP 128
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 129 LDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATP 188
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + +R ++ +EVDGGVT
Sbjct: 189 LSCIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCAERGVNPWIEVDGGVTP 248
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 249 SNAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKTS 284
>gi|163787529|ref|ZP_02181976.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Flavobacteriales bacterium ALC-1]
gi|159877417|gb|EDP71474.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Flavobacteriales bacterium ALC-1]
Length = 220
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF L + + + A H DVMDG FVPNIS+G VI +++ ++ D
Sbjct: 6 IAPSMLAADFGNLQRDTEMVNNSDADWFHIDVMDGHFVPNISYGMPVIAAIKKHATKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I A G DIIT H ES+ H+ R+LR I G K G+ +N TP+ +L
Sbjct: 66 VHLMIEKPERYIEEFAKVGADIITVHYESTVHLHRTLRQIKDTGCKAGIVLNITTPLNVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED++ E MIL+M++NPGFGGQ+ + T +I+ + +I + + +E+DGGVT +NIK
Sbjct: 126 EDILPECYMILLMSINPGFGGQKFEDITYKRIKNLRKMIDDQGLDTRIEIDGGVTDKNIK 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
LV+AGAD V GS F + K L +L S
Sbjct: 186 KLVEAGADTFVAGSHVFKSDNPTATIKNLKNLANS 220
>gi|107024114|ref|YP_622441.1| ribulose-phosphate 3-epimerase [Burkholderia cenocepacia AU 1054]
gi|116688560|ref|YP_834183.1| ribulose-phosphate 3-epimerase [Burkholderia cenocepacia HI2424]
gi|105894303|gb|ABF77468.1| ribulose-5-phosphate 3-epimerase [Burkholderia cenocepacia AU 1054]
gi|116646649|gb|ABK07290.1| ribulose-5-phosphate 3-epimerase [Burkholderia cenocepacia HI2424]
Length = 228
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 142/225 (63%), Gaps = 10/225 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHVQV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP TP+
Sbjct: 63 PIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEVDGG
Sbjct: 123 NYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F G+ Y K ++++ ++ALA
Sbjct: 183 VKADNIAEIAAAGADAFVAGSAIF---GKPDYRKVIDEM-RAALA 223
>gi|257457859|ref|ZP_05623018.1| ribulose-phosphate 3-epimerase [Treponema vincentii ATCC 35580]
gi|257444572|gb|EEV19656.1| ribulose-phosphate 3-epimerase [Treponema vincentii ATCC 35580]
Length = 209
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 132/205 (64%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S + PS+L+ADFSRL EE+ I G + +H DVMDG FVPN++FGA V+RSLRS
Sbjct: 1 MDASFILAPSLLSADFSRLAEELQFIEVNGGQWVHLDVMDGAFVPNLTFGAPVVRSLRSK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLM++ + A AG D TFH E+ H R + I A G K GV+I P
Sbjct: 61 STLPFDVHLMVAHPQDFVKDFAAAGADYFTFHIEAVVHAHRLITEIRAAGMKPGVSIVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR---QAKALIGKRSISLEVDGG 177
TPV +L++V+ +D++L+MTVNPGFGGQ +I + K++ + + G R + + VDGG
Sbjct: 121 TPVHLLDEVLPFVDLVLVMTVNPGFGGQTMIIPCLEKVKKLCEYREKYGYRYL-ISVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V + + ++ +GAD++V GSSFF+
Sbjct: 180 VNAETLPAVCSSGADVVVSGSSFFS 204
>gi|94676944|ref|YP_588501.1| ribulose-phosphate 3-epimerase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94220094|gb|ABF14253.1| ribulose-phosphate 3-epimerase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 231
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 128/183 (69%), Gaps = 3/183 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I+PSIL+A+F+RLGE+I + AGA IHFDVMD +VPN++ G V+ +LR Y ++
Sbjct: 8 IIPSILSANFARLGEDIVRVISAGADVIHFDVMDNHYVPNLTMGPMVLNALREYGITIPV 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG + ITFHPE+S HI RSL+ I + + G+A+NP T +
Sbjct: 68 DVHLMVKPVDKLIADFAAAGANYITFHPEASEHIERSLQMIKELNCQAGLAMNPATSLYC 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
LE +ID++D+IL+M+VNPGFGGQ + T+ KI+QA+ +I + +I LEVDGGVT NI
Sbjct: 128 LEYIIDKVDIILLMSVNPGFGGQSFLPMTLKKIQQARKIIDQNNLNIRLEVDGGVTLENI 187
Query: 184 KSL 186
S+
Sbjct: 188 GSI 190
>gi|194335773|ref|YP_002017567.1| Ribulose-phosphate 3-epimerase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308250|gb|ACF42950.1| Ribulose-phosphate 3-epimerase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 221
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 137/218 (62%), Gaps = 2/218 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PS + PSIL+ADF+RL I TKAGA +H D+MDG FVPNI+FG +++++ S +
Sbjct: 4 PSTLLAPSILSADFTRLEHSIDIATKAGADWMHCDIMDGNFVPNITFGPLIVQAIASCTP 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLMI D I AG IT H E+ PH+ R+++ I ++G K GV+INP T
Sbjct: 64 MIIDTHLMIVDPDRFIEEFIKAGSHQITVHQEACPHLHRTIQLIKSLGAKAGVSINPGTS 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
++ LE ++ ++D++L+M+VNPGFGGQ+ I S+I KIRQ + K + + +DGG+T
Sbjct: 124 LSTLESILPDLDLVLLMSVNPGFGGQKFIPSSIGKIRQLHEMRLKVNPGMVIAIDGGITE 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N + +V AGAD L+ G++FF A + + +
Sbjct: 184 ENGQEVVSAGADALIAGTAFFKAANPAQTAAKFRAMTR 221
>gi|328955505|ref|YP_004372838.1| ribulose-5-phosphate 3-epimerase [Coriobacterium glomerans PW2]
gi|328455829|gb|AEB07023.1| ribulose-5-phosphate 3-epimerase [Coriobacterium glomerans PW2]
Length = 226
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 139/225 (61%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PSILAAD + LG E++ I AGA IH DVMDG F N+SFG ++ + +
Sbjct: 1 MREEISIAPSILAADITALGTELARI--AGADLIHIDVMDGHFTENLSFGPAIVAACKRD 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D H+M+++ D I+ ADAG D+I+ H E++ H+ R + + G + GV +NP
Sbjct: 59 CSIPLDVHMMVTNPDETIDWYADAGADMISVHVEAATHLHRIVHRLRDRGVRAGVTLNPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV+ LE +I+++D +L+M+V+PGFGGQ IE T K+RQ L R + ++EVDGG+
Sbjct: 119 TPVSALESIIEDVDAVLVMSVDPGFGGQSFIEGTYAKLRQLSDLCAHRRVNPAIEVDGGI 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++ N++ +V AGAD LV GS+ F + + L +L LA+
Sbjct: 179 SAANVEQVVAAGADTLVAGSAVFGAADPSAEMELLRELATRGLAL 223
>gi|145220242|ref|YP_001130951.1| ribulose-5-phosphate 3-epimerase [Prosthecochloris vibrioformis DSM
265]
gi|145206406|gb|ABP37449.1| ribulose-5-phosphate 3-epimerase [Chlorobium phaeovibrioides DSM
265]
Length = 221
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 132/200 (66%), Gaps = 2/200 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+AD +RLG+ + AGA IH D+MDG FVPNI+FG V+ ++ +
Sbjct: 5 STLIAPSILSADLTRLGQSLKIAEDAGADWIHCDIMDGNFVPNITFGPIVVDAIAKNTPL 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ D +I AG IT H E+ PH+ R+++ I ++G K GV++NP TP+
Sbjct: 65 VIDTHLMIADPDRYIEAFVKAGSHQITVHQETCPHLHRTIQFIKSLGAKAGVSLNPATPI 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
+ LE ++ ++D++LIM+VNPGFGGQ+ I S++ KIR + R+ + + VDGG+T
Sbjct: 125 STLESILPDLDLVLIMSVNPGFGGQKFIPSSVEKIRLLHQMRTLRNPDMVIAVDGGITEE 184
Query: 182 NIKSLVQAGADLLVVGSSFF 201
N + +V AGAD L+ G++FF
Sbjct: 185 NAQEVVSAGADALIAGTAFF 204
>gi|9105012|gb|AAF83021.1|AE003874_5 D-ribulose-5-phosphate 3-epimerase [Xylella fastidiosa 9a5c]
Length = 239
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 133/200 (66%), Gaps = 5/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY +
Sbjct: 22 IAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYGITAPI 81
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + AG +I+FH E+S H+ R+++ I + G G+ NP TPV +
Sbjct: 82 DVHLMVEPVDRIVPDFTQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPATPVDM 141
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA---LIGKRSISLEVDGGVTSRN 182
L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + L+G R + LEVDGGV N
Sbjct: 142 LDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLG-RPVRLEVDGGVGIDN 200
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I ++ +AGAD V GS+ F+
Sbjct: 201 IGAIAEAGADTFVAGSAIFH 220
>gi|332976462|gb|EGK13308.1| ribulose-phosphate 3-epimerase [Desmospora sp. 8437]
Length = 225
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 133/221 (60%), Gaps = 3/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGEEI+++ +AGA IH DVMDG FVPN++ G ++ ++R +
Sbjct: 2 VKIAPSILSADFARLGEEIADVERAGADWIHVDVMDGHFVPNLTIGPLIVEAIRPRTRLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG D I+ H E PH+ R+L I G K GV +NP TP
Sbjct: 62 LDVHLMIEEPDRYIPAFAQAGADWISVHQEVCPHLHRTLHLIKEQGVKAGVVLNPATPAE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+L+ ++ ++D++L+MTVNPGFGGQ I + KIR+ ++ G + LEVDGGV
Sbjct: 122 VLQPILPDLDLVLLMTVNPGFGGQAFIPGVLDKIRRVHRMLEEAGLSGVELEVDGGVNPD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGA +LV GS+ F +K L +S LA
Sbjct: 182 TAAETAAAGASVLVAGSAVFGRKDRGEAISALRGGAESGLA 222
>gi|289435161|ref|YP_003465033.1| ribulose-phosphate 3-epimerase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289171405|emb|CBH27949.1| ribulose-phosphate 3-epimerase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 218
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K +I ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKQIIDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K AGA++ V GS + K S +L
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQSPIDKL 212
>gi|224026560|ref|ZP_03644926.1| hypothetical protein BACCOPRO_03317 [Bacteroides coprophilus DSM
18228]
gi|224019796|gb|EEF77794.1| hypothetical protein BACCOPRO_03317 [Bacteroides coprophilus DSM
18228]
Length = 219
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 136/220 (61%), Gaps = 4/220 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+L+ADF L ++ I + A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKNEILISPSLLSADFGNLKADLDKINASEADWLHIDIMDGVFVPNISFGFPVLKYVAEL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + I + D G ++ H E+ PH+ R ++ I G K GV +NP
Sbjct: 61 SKKPLDVHLMIVQPEKFIREVKDLGAMMMNVHFEACPHLHRVVQQIKEAGMKAGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGG 177
TPV++L D+I+E+DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI G ++ +EVDGG
Sbjct: 121 TPVSMLADIIEEVDMVLLMSVNPGFGGQKFIPHTLKKVRELRELITATGSHAL-IEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V + SL++AGAD+LV G++ F I +L ++K
Sbjct: 180 VNLQTAPSLIEAGADVLVAGNAVFKADDMIGTIHQLKNMK 219
>gi|255074321|ref|XP_002500835.1| ribulose-phosphate 3-epimerase [Micromonas sp. RCC299]
gi|226516098|gb|ACO62093.1| ribulose-phosphate 3-epimerase [Micromonas sp. RCC299]
Length = 268
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 141/220 (64%), Gaps = 7/220 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSIL+A+F+ LG E+ + +AGA+ IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 48 SVIVSPSILSANFATLGAEVKAVDEAGAEWIHIDVMDGRFVPNITIGPLVVDALRPVTDK 107
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLMI + + A AG DII+ H E S+ H+ R++ I +G K GV +NP T
Sbjct: 108 VLDTHLMIVEPELRVADFAKAGSDIISVHAEGASTIHLHRTINQIKDLGCKAGVVLNPGT 167
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
LE ++D +D+IL+M+VNPGFGGQ IES + KI++ KA+ + ++ +EVDGGV+
Sbjct: 168 HPDCLEYILDCVDLILVMSVNPGFGGQSFIESQVDKIKKIKAMCDAKGVNPWIEVDGGVS 227
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N ++ AGA+ LV GS+ FN YAK + +K S
Sbjct: 228 PANAYKVIDAGANALVAGSAVFNSD---DYAKAIAGIKAS 264
>gi|159903537|ref|YP_001550881.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9211]
gi|159888713|gb|ABX08927.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9211]
Length = 221
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 136/218 (62%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 SLAIAPSILSADFSRLGEEVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTKK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A AG D I E+ H+ R+L I +GKK G +NP T +
Sbjct: 63 PLDVHLMIVEPEKYVADFAKAGADHIYVQVETCQHLHRNLAQIKDLGKKAGAVLNPGTKI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
LE ++ D++LIM+VNPGFGGQ IE+ + KIR + + +R + +EVDGG+ +
Sbjct: 123 DTLEYCLELCDLVLIMSVNPGFGGQSFIENQVDKIRDLRTICQERGLDPWIEVDGGIKAG 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ YA+ + +++S
Sbjct: 183 NAWKVIEAGANAIVSGSGIFNQP---DYAQAIKGIRES 217
>gi|47096539|ref|ZP_00234129.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|224500049|ref|ZP_03668398.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes Finland
1988]
gi|254829187|ref|ZP_05233874.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|254831580|ref|ZP_05236235.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 10403S]
gi|254899485|ref|ZP_05259409.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J0161]
gi|254912376|ref|ZP_05262388.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
gi|254936703|ref|ZP_05268400.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|284802264|ref|YP_003414129.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 08-5578]
gi|284995406|ref|YP_003417174.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 08-5923]
gi|47015071|gb|EAL06014.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|258601597|gb|EEW14922.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258609300|gb|EEW21908.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|284057826|gb|ADB68767.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 08-5578]
gi|284060873|gb|ADB71812.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 08-5923]
gi|293590358|gb|EFF98692.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
Length = 218
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ K+ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKEIVDKKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|307565936|ref|ZP_07628395.1| ribulose-phosphate 3-epimerase [Prevotella amnii CRIS 21A-A]
gi|307345364|gb|EFN90742.1| ribulose-phosphate 3-epimerase [Prevotella amnii CRIS 21A-A]
Length = 216
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PS+L+ADF L ++I I + A +H DVMDG FVPNISFG V++++
Sbjct: 2 SVIVSPSLLSADFLHLYKDIEMINNSDADWLHMDVMDGSFVPNISFGFPVMKAVSKVLKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +++I D G I+ H E+ H+ R+L+ I A G K GV +NP TPV
Sbjct: 62 PMDVHLMIKHPENYIQQTLDCGAAIMNIHYEACIHLHRTLQAIKATGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LED+I++ID++ IM+VNPGFGGQ I+S++ K+R+ KALI + +EVDGGV
Sbjct: 122 NVLEDIIEDIDIVQIMSVNPGFGGQSFIKSSLKKVRKLKALIENEHCNTLIEVDGGVNGE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AG D+LV GS F K S K L L
Sbjct: 182 TAPLLIDAGTDILVSGSYIFGSKNPYSTIKSLKAL 216
>gi|257882569|ref|ZP_05662222.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,502]
gi|294623692|ref|ZP_06702525.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
gi|257818227|gb|EEV45555.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,502]
gi|291596907|gb|EFF28125.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
Length = 216
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGRFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKITELADLRRENNWTYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|308273502|emb|CBX30104.1| Ribulose-phosphate 3-epimerase [uncultured Desulfobacterium sp.]
Length = 218
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 139/214 (64%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFS LGEEI ++ KAGA IH DVMDG FVPNI+ GA V+++++ + D
Sbjct: 4 IAPSILSADFSILGEEIKSVEKAGADWIHVDVMDGHFVPNITMGALVVKAVKPVTTLPVD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D+ I A AG I+ E+ H+ R+++ I G K GVA+NP TP++ +
Sbjct: 64 VHLMIENADNFIPDFAKAGASFISVQVETCTHLNRTVQLIREHGVKAGVALNPSTPLSAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E V++ ID +L+MTVNPGFGGQ I +++ KI+ +I ++ +S ++VDGG+ I
Sbjct: 124 EWVLEYIDFVLVMTVNPGFGGQAFINNSLTKIKTLDRIIKEQGLSTLIQVDGGINKETIG 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGAD+ V GS+ F G +Y + ++ LKK
Sbjct: 184 EVSVAGADIFVAGSAIF---GSNNYKETIDLLKK 214
>gi|229495425|ref|ZP_04389160.1| ribulose-phosphate 3-epimerase [Porphyromonas endodontalis ATCC
35406]
gi|229317868|gb|EEN83766.1| ribulose-phosphate 3-epimerase [Porphyromonas endodontalis ATCC
35406]
Length = 218
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P + PS+L+ADF L E + I ++ A +H DVMDG FVPN+SFG ++ ++
Sbjct: 1 MSPIVS--PSLLSADFLHLEESVKMINQSNADWLHIDVMDGVFVPNLSFGFPILEAISPI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI I +A G I+ H E SPH+ RSL I A G K+GV +NP
Sbjct: 59 CRKPLDVHLMIVDPLKFIEPLAKVGTHIMNIHYEVSPHLHRSLTAIRAAGMKSGVTLNPH 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LEDV++E D++L+M+VNPGFGGQ+ I T+ K R+ + +I +R + LEVDGGV
Sbjct: 119 TPVEVLEDVLEECDLVLLMSVNPGFGGQKFIHRTLEKTRRLRRMIDERGLETILEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQ 203
+ LV+AGAD LV GS F
Sbjct: 179 NATTAPLLVEAGADALVAGSYVFGH 203
>gi|78187503|ref|YP_375546.1| ribulose-phosphate 3-epimerase [Chlorobium luteolum DSM 273]
gi|78167405|gb|ABB24503.1| ribulose-5-phosphate 3-epimerase [Chlorobium luteolum DSM 273]
Length = 221
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 136/201 (67%), Gaps = 6/201 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+PS + PSIL+AD LGE + AGA IH D+MDG FVPNI+FG V++++ + +
Sbjct: 3 SPSTLLAPSILSADLMHLGEALKTAEAAGADWIHCDIMDGNFVPNITFGPIVVQAIANNT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLMI+ D +I AG +T H E+ PH+ R+++ I ++G K GV++NP T
Sbjct: 63 TMVVDTHLMIADPDRYIEEFVKAGSHQVTVHQETCPHLHRTVQFIKSLGAKAGVSVNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE----VDGG 177
PV+ LE+++ ++D++LIM+VNPGFGGQ+ I ++I KI++ A+ +R ++ E VDGG
Sbjct: 123 PVSTLEEILPDLDLVLIMSVNPGFGGQKFIPASIEKIKKLDAM--RRKLNPELVIAVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGS 198
+T N +++V AGAD L+ G+
Sbjct: 181 ITEENAEAVVLAGADALIAGT 201
>gi|297623324|ref|YP_003704758.1| ribulose-phosphate 3-epimerase [Truepera radiovictrix DSM 17093]
gi|297164504|gb|ADI14215.1| ribulose-phosphate 3-epimerase [Truepera radiovictrix DSM 17093]
Length = 234
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 137/208 (65%), Gaps = 2/208 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++++ PS+LAADF+RLG+E+ GA IH DVMDG FVPN+S G ++ + R +
Sbjct: 13 ALKLAPSLLAADFARLGDELRAAEAGGADLIHVDVMDGHFVPNLSLGPLIVEACRRVTSL 72
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMISS + +I A+AG DIIT H E++PH+ R+L I G + GVA+NP TP+
Sbjct: 73 PLDVHLMISSPERYIGAFAEAGADIITVHAEATPHLHRALGLIRECGVQAGVALNPATPL 132
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+L +V+ +D++L+M+VNPGFGGQ IE ++ ++R A+A+I + LEVDGG+
Sbjct: 133 TVLNEVLALVDLVLVMSVNPGFGGQTFIEGSLRRLRAARAIIDAQRPGCLLEVDGGINHE 192
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY 209
AGAD+LV GS+ F +G +++
Sbjct: 193 TAPRAYHAGADVLVAGSAVFGGEGGVAH 220
>gi|319892218|ref|YP_004149093.1| Ribulose-phosphate 3-epimerase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161914|gb|ADV05457.1| Ribulose-phosphate 3-epimerase [Staphylococcus pseudintermedius
HKU10-03]
gi|323464685|gb|ADX76838.1| ribulose-phosphate 3-epimerase [Staphylococcus pseudintermedius
ED99]
Length = 216
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 135/210 (64%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ADF L +E++ + ++G +HFDVMDG FVPNIS G V+ ++R+ +D
Sbjct: 3 KVFPSLLSADFLNLKQELTKLEESGIDALHFDVMDGQFVPNISIGFPVLEAIRAATDLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + ++ A+ G + I+ H E +PHI R ++ I G + GV INP TPV
Sbjct: 63 DAHLMIETPNDYVEAFAEKGVNKISVHMEGNPHIHRVVQNIKKHGVEAGVVINPGTPVHA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ +I+E+D +L+M+VNPGFGGQ + + + KI+Q + R + +EVDGG+ +
Sbjct: 123 LDAIIEEVDFVLVMSVNPGFGGQAFLPAAVDKIKQLDDIRKNRQLDFKIEVDGGINDQTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K +++AGAD LV GS FF++ +RL
Sbjct: 183 KQVIEAGADWLVAGSYFFSRADYKEANQRL 212
>gi|284928778|ref|YP_003421300.1| ribulose-5-phosphate 3-epimerase [cyanobacterium UCYN-A]
gi|284809237|gb|ADB94942.1| ribulose-5-phosphate 3-epimerase [cyanobacterium UCYN-A]
Length = 228
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 141/223 (63%), Gaps = 7/223 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADFS L EEI + KAGA IH DVMDG FVPNI+ G V+ ++R Y+
Sbjct: 8 IVISPSILSADFSCLREEIELVDKAGADWIHIDVMDGRFVPNITIGPLVVEAIRPYTKKP 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + +I +AG DII+ H E +S H+ R+L I +GKK GV +NP TP
Sbjct: 68 LDVHLMIVEPEKYITDFVNAGADIISIHAENNASLHLHRTLGQIKELGKKAGVVLNPATP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ +E V++ D+ILIM+VNPGFGGQ I + + KI Q + + K+ + +EVDGG+
Sbjct: 128 LTSIEHVLEICDLILIMSVNPGFGGQSFIPTMLDKIYQLRQICNKKGLDPWIEVDGGLKP 187
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
N +++AGA+ +V GS+ F +YA+ + +++S +I
Sbjct: 188 ENTWKVIEAGANSIVAGSAIFKSA---NYAEAIRGIRESKSSI 227
>gi|229541133|ref|ZP_04430193.1| ribulose-phosphate 3-epimerase [Bacillus coagulans 36D1]
gi|229325553|gb|EEN91228.1| ribulose-phosphate 3-epimerase [Bacillus coagulans 36D1]
Length = 216
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 131/202 (64%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F++LGEEI ++ + GA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 2 VKIAPSILSANFAKLGEEIKDVEEGGADWIHIDVMDGHFVPNITMGPLVVGAVRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D ++ A AG D I+ H E+ H+ R+++ I ++G GV +NP TPV
Sbjct: 62 LDVHLMIENPDQYLEAFAKAGADTISVHVEACRHLHRTIQEIRSLGVNPGVVLNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ ++ ++L+MTVNPGFGGQ IES +PKI + L ++ ++ +EVDGG+
Sbjct: 122 WIAPILGDVGLVLLMTVNPGFGGQAFIESVVPKIEKLHRLKKEQGLAFDIEVDGGIHPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ QAGA +LV GS+ F K
Sbjct: 182 AQKCTQAGATVLVAGSNIFKSK 203
>gi|158320469|ref|YP_001512976.1| ribulose-phosphate 3-epimerase [Alkaliphilus oremlandii OhILAs]
gi|158140668|gb|ABW18980.1| Ribulose-phosphate 3-epimerase [Alkaliphilus oremlandii OhILAs]
Length = 217
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 132/202 (65%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFS L ++ + AG +H DVMDG FVPNI+ G ++ SL+ +
Sbjct: 1 MKLAPSILSADFSNLIGDVKRVEDAGCDMLHIDVMDGHFVPNITIGPLIVESLQGKTTLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I A AG II+ H E+ H+ R+++ I A K VA+NP TP+
Sbjct: 61 FDVHLMIEDPDQYIPQFAKAGAHIISVHSEACVHLHRTIQLIKAHNVKAAVALNPGTPLN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E V++++DM+LIMTVNPGFGGQ IE I KIR K +I R SI ++VDGG+ N
Sbjct: 121 VIEHVLEDLDMVLIMTVNPGFGGQSFIEPMIEKIRSLKKIIEDRGLSIDIQVDGGIKVDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+K ++ AGA+++V GS+ F +
Sbjct: 181 VKKVIDAGANIIVAGSAIFGSE 202
>gi|257899954|ref|ZP_05679607.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com15]
gi|257837866|gb|EEV62940.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com15]
Length = 216
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+++ V+ + +L+MTVNPGFGGQ IE T+ KI + L + S ++EVDGG+
Sbjct: 121 MIKHVLPLANQVLVMTVNPGFGGQSFIEETVEKITELADLRKENNWSYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|225850190|ref|YP_002730424.1| ribulose-phosphate 3-epimerase [Persephonella marina EX-H1]
gi|225644872|gb|ACO03058.1| ribulose-phosphate 3-epimerase [Persephonella marina EX-H1]
Length = 225
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 142/227 (62%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADFS+LGEEI + K GA IH DVMDG +VPNI+ G VI SLRS
Sbjct: 1 MAETKLIAPSILSADFSKLGEEIRKVEKGGADIIHLDVMDGRYVPNITIGPPVIESLRSI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D FD HLMI + ++ AGCD+I+FH ++ H R + I + K GV +NP
Sbjct: 61 TDLPFDAHLMIVEPERYVPDFIKAGCDMISFHMDACIHSHRLVDYIKSQNVKAGVVLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGG 177
TPV LE++I ID +LIM+VNPGFGGQ+ I T+ K+++ K L+ G+ I +E+DGG
Sbjct: 121 TPVNTLEEIIYYIDYVLIMSVNPGFGGQKFIPETLNKVKKLKKLMEETGRTDILIEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+ NI + AG ++ V GSS F + A+ + LK+ AL I+
Sbjct: 181 ININNIGDVSSAGVNIFVAGSSIFKAEDP---AEMVRKLKEKALYIE 224
>gi|94967105|ref|YP_589153.1| ribulose-5-phosphate 3-epimerase [Candidatus Koribacter versatilis
Ellin345]
gi|94549155|gb|ABF39079.1| ribulose-5-phosphate 3-epimerase [Candidatus Koribacter versatilis
Ellin345]
Length = 224
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 135/218 (61%), Gaps = 2/218 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+RL E++ + G +HFDVMDG FVPNI+ G V++SLR +
Sbjct: 2 IELAPSILSADFARLAEQVEAAIQGGGTVVHFDVMDGHFVPNITIGPPVLKSLRKAVKAP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + D++I ADAG + I+ H E+ H+ R+L I G + GV INP TPV
Sbjct: 62 IDCHLMIENPDAYIPAFADAGANWISVHQEACLHLDRTLHLIRDHGCRAGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRN 182
L +V+D +D +L+M+VNPGFG Q I +T+ K+R+ AL G + +E+DGG+
Sbjct: 122 TLSEVLDIVDYVLVMSVNPGFGAQPFIPATLHKVRKLVALRNQGGTNFRIEIDGGMALDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I ++AG +++V G++ F + A+ L SA
Sbjct: 182 IGEAIRAGVEIVVAGNAVFGKGDPAENARELLKAANSA 219
>gi|16803858|ref|NP_465343.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes EGD-e]
gi|224501380|ref|ZP_03669687.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-561]
gi|16411272|emb|CAC99896.1| lmo1818 [Listeria monocytogenes EGD-e]
Length = 218
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFATLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ K+ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKEIVDKKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|313632750|gb|EFR99718.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
gi|313637327|gb|EFS02812.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL S4-171]
Length = 218
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 129/210 (61%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKQIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K AGA++ V GS + K S +L
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQSPIDKL 212
>gi|77747495|ref|NP_297501.2| ribulose-phosphate 3-epimerase [Xylella fastidiosa 9a5c]
Length = 223
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 133/200 (66%), Gaps = 5/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY +
Sbjct: 6 IAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + AG +I+FH E+S H+ R+++ I + G G+ NP TPV +
Sbjct: 66 DVHLMVEPVDRIVPDFTQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPATPVDM 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA---LIGKRSISLEVDGGVTSRN 182
L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + L+G R + LEVDGGV N
Sbjct: 126 LDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLG-RPVRLEVDGGVGIDN 184
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I ++ +AGAD V GS+ F+
Sbjct: 185 IGAIAEAGADTFVAGSAIFH 204
>gi|313679674|ref|YP_004057413.1| ribulose-5-phosphate 3-epimerase [Oceanithermus profundus DSM
14977]
gi|313152389|gb|ADR36240.1| ribulose-5-phosphate 3-epimerase [Oceanithermus profundus DSM
14977]
Length = 219
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 137/218 (62%), Gaps = 4/218 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +++ AGA IH DVMDG FVPNI+ G V+ +LR + D
Sbjct: 4 IAPSILSADFARLADQVRAAEAAGADWIHVDVMDGRFVPNITMGFVVVEALRPVTRLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ AG D++T H E++ H+ R+L+ I + G + G+A+NP TP+
Sbjct: 64 VHLMIVEPERYVERFVAAGADVVTVHVEATAHVHRTLQLIRSAGARAGLAVNPATPLDWF 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
EDV+ E+D+ L+M+VNPGFGGQ+ I ++ ++ + AL + +EVDGGV N
Sbjct: 124 EDVLGELDLALLMSVNPGFGGQRFIPRSLERLERLAALRDRVNPEARIEVDGGVGPGNAA 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
LV+ GAD+LV GS+ F G + A+ L+ L+ +A A
Sbjct: 184 ELVRRGADVLVAGSAVFGGDGTV--AENLSALRDAAQA 219
>gi|332184341|gb|AEE26595.1| Ribulose-phosphate 3-epimerase [Francisella cf. novicida 3523]
Length = 222
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y +
Sbjct: 4 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITA 63
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G K G+A+NP T +
Sbjct: 64 GMDVHLMVKPVDNLIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIKAGLALNPATGI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 124 DCLKYVESHIDRVLIMSVNPGFGGQKFIPAMLDKAKEVSQWIKSTARDILLEIDGGVNPH 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 184 NIAEIAACGVNAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|261493134|ref|ZP_05989669.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495779|ref|ZP_05992215.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308544|gb|EEY09811.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311189|gb|EEY12357.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 225
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLG++++ + KAGA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 8 IAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHYVPNLTFGPAICKALRDYGIQCPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ I A AG D ITFHPE++ HI R+L+ I +G K+G+ NP TP++
Sbjct: 68 DVHLMVKPVERLIPDFAKAGADYITFHPEATEHIDRNLQLIRDLGCKSGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D++L+M+VNPGFGGQ I ST+ K+++ + I + +I LEVDGG+ NI
Sbjct: 128 LDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKLKEVRRRIDESGYNIRLEVDGGMKINNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS+ F+Q
Sbjct: 188 ADIAAAGADMFVAGSAIFDQ 207
>gi|307109731|gb|EFN57968.1| ribulose-phosphate 3-epimerase mature form [Chlorella variabilis]
Length = 230
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 138/215 (64%), Gaps = 7/215 (3%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+A+F++LGE+++ I KAG IH DVMDG FVPNI+ GA V+ +LR +D DCH
Sbjct: 11 PSILSANFAKLGEQVAAIDKAGCDWIHVDVMDGRFVPNITIGALVVDALRPVTDKPLDCH 70
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETPVAIL 126
LMI + + A AG DII+ H E S H+ R + I +G K GV +NP TP+ +
Sbjct: 71 LMIVEPELRVADFAKAGADIISVHAEQSSTIHLHRVVNQIKELGCKAGVVLNPGTPLEQI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E V+ +D++LIM+VNPGFGGQ+ I+S I KI + KA+ ++ + +EVDGGVT N
Sbjct: 131 EYVLPIVDLVLIMSVNPGFGGQKFIDSQIDKIAKLKAMCLEKGCNPWIEVDGGVTPDNAY 190
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+++AGA+ +V GS F K YA + +K S
Sbjct: 191 LVIEAGANAIVSGSGVFGAK---DYAAAIQGIKTS 222
>gi|332885336|gb|EGK05587.1| ribulose-phosphate 3-epimerase [Dysgonomonas mossii DSM 22836]
Length = 216
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF L +I + + A H DVMDG FVPNISFG +I+ + +
Sbjct: 4 KIAPSLLSADFLNLQADIEMVNNSEADWFHCDVMDGTFVPNISFGFPIIKQISKMAKKPL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I ++ DAG ++ H E+ H+ R++ IH G K V +NP TPV +
Sbjct: 64 DVHLMIVNPDQYIPVVKDAGAYMMNVHYEACVHLHRTIAAIHDAGMKAAVTLNPHTPVCL 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED++ ++DM+L+M+VNPGFGGQ+ IE T+ K+ K +I +R + +EVDGGV
Sbjct: 124 LEDILQDLDMVLLMSVNPGFGGQKFIERTLDKVSCLKDMIVRRGLHTLIEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K LV AGAD+LV G++ F +L L
Sbjct: 184 KRLVDAGADVLVAGNAVFADANPTEMIHKLKSL 216
>gi|119493918|ref|ZP_01624481.1| ribulose-phosphate 3-epimerase [Lyngbya sp. PCC 8106]
gi|119452358|gb|EAW33551.1| ribulose-phosphate 3-epimerase [Lyngbya sp. PCC 8106]
Length = 233
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 138/217 (63%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRLG+E+ + +AGA IH DVMDG FVPNI+ G ++ +LR + D
Sbjct: 10 ISPSILSADFSRLGDEVRAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTRKPLD 69
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP TP+
Sbjct: 70 VHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNPGTPLE 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E +D D++LIM+VNPGFGGQ I + KI++ + + +R + +EVDGG+ N
Sbjct: 130 LIEYSLDLCDLVLIMSVNPGFGGQSFIPGVVSKIQKLRQMCDQRGLDPWIEVDGGLKVNN 189
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 190 TWQVLEAGANAIVAGSAVFKAS---DYAEAIAGIRNS 223
>gi|269958396|ref|YP_003328183.1| ribulose-phosphate 3-epimerase [Anaplasma centrale str. Israel]
gi|269848225|gb|ACZ48869.1| ribulose-phosphate 3-epimerase [Anaplasma centrale str. Israel]
Length = 272
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 133/195 (68%), Gaps = 2/195 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+L+ADF+ L I+ + AGA +H DVMDGCFVPN++ G +I +R + V D HL
Sbjct: 64 SMLSADFTNLSASIAAVETAGADWLHIDVMDGCFVPNLTMGPIIIAGIRQCTRLVLDVHL 123
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ + H+ + DAG DI+T H ES H+ R +R + GKK GV++ P+T ++LE V
Sbjct: 124 MVRTPALHLRSVIDAGADIVTVHAESDVHLYRFVREAKSYGKKVGVSLVPKTHHSVLEYV 183
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLV 187
I E+D++L+M+V+PGFGGQ+ + S + KI + +A++ + S+ + VDGGVT+ N+ S++
Sbjct: 184 IHELDLVLVMSVDPGFGGQEFLVSQLRKIEKIRAMVEQYSLPTKISVDGGVTTENVGSII 243
Query: 188 QAGADLLVVGSSFFN 202
AGAD++VVG+S F
Sbjct: 244 GAGADVVVVGTSLFK 258
>gi|293553680|ref|ZP_06674304.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1039]
gi|291602255|gb|EFF32483.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1039]
Length = 216
Score = 182 bits (463), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKITELADLRRENNWTYAIEVDGGIVPDT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|124006027|ref|ZP_01690864.1| ribulose-phosphate 3-epimerase [Microscilla marina ATCC 23134]
gi|123988434|gb|EAY28080.1| ribulose-phosphate 3-epimerase [Microscilla marina ATCC 23134]
Length = 215
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 131/204 (64%), Gaps = 2/204 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ + +E+ + ++ A IH D+MDG FVPNISFG V+ +++ ++ D
Sbjct: 5 IAPSILAADFANIQKEVEMLNESSADWIHIDIMDGMFVPNISFGMPVLAAIQKHAKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ G D I+ H E+ PH+ R+L+ + + + GVA+NP T V +L
Sbjct: 65 VHLMIEQPERYVETFKKLGADTISVHYEACPHLHRNLQQLRDLDCRVGVALNPHTSVELL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
D + +ID++ +M+VNPGFGGQ+ IE T K+R+ +A+ ++ L E+DGGV S N
Sbjct: 125 ADTLQDIDLVCMMSVNPGFGGQKFIEQTYQKVRKLRAMAEAQNTPLHIEIDGGVNSENAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
L++AGAD+LV GS F + I+
Sbjct: 185 KLIEAGADVLVAGSFVFRAEDPIA 208
>gi|167627693|ref|YP_001678193.1| ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597694|gb|ABZ87692.1| Ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 222
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
QI PSIL+AD +RLG+++ + +AGA +HFDVMD +VPN++FG V+++LR Y S
Sbjct: 4 FQINPSILSADLARLGDDVQAVLEAGADNVHFDVMDNHYVPNLTFGPMVLKALRDYGISA 63
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G G+A+NP T +
Sbjct: 64 GMDVHLMVKPVDALIESFAKAGASSIVFHPEASEHIDRSLQLIKSFGIDAGLALNPATGI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 124 DCLKYVESHIDRVLIMSVNPGFGGQKFIPAMLDKAKEVSQWIKSTGRDILLEIDGGVNPN 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G D V GS+ FN SY + ++ ++
Sbjct: 184 NIAEIAACGVDAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|296110618|ref|YP_003620999.1| ribulose-phosphate 3-epimerase [Leuconostoc kimchii IMSNU 11154]
gi|295832149|gb|ADG40030.1| ribulose-phosphate 3-epimerase [Leuconostoc kimchii IMSNU 11154]
Length = 218
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 140/214 (65%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+AD++ L ++ + +AGA+ +H DVMDG FVP+IS+G + ++ LR +D + D
Sbjct: 5 IAPSILSADYTNLERDVKLVEEAGAEYLHIDVMDGSFVPSISYGPNWVKQLRPETDMILD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + + ++ +DAG DII H E++ HI R L+ I G K V INP TPV +
Sbjct: 65 VHLMVVNPEKIVDEFSDAGADIIGVHVEATSHIHRVLQMIKNKGVKAEVVINPGTPVLAI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E V+D +D +L+MTVNPGFGGQ+ + STI K+ Q KA+ + + +E+DGGV + I
Sbjct: 125 ESVLDMVDQVLVMTVNPGFGGQKFLPSTIEKVAQLKAIRDELGYTFDIEIDGGVNNETIG 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA++ V GS +++ + A ++N LK+
Sbjct: 185 AAYEAGANVFVAGSYVYDK---VDPAAKINLLKE 215
>gi|312132115|ref|YP_003999455.1| ribulose-phosphate 3-epimerase [Leadbetterella byssophila DSM
17132]
gi|311908661|gb|ADQ19102.1| ribulose-phosphate 3-epimerase [Leadbetterella byssophila DSM
17132]
Length = 216
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L ++ + + A H D+MDG FVPN+SFG V ++ ++ D
Sbjct: 4 IAPSVLAADFANLQRDVELVNASAADWFHIDIMDGVFVPNLSFGVPVTEAIAKHAKKPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I A AG IT H E+ HI R+L I G K GV +NP TP+++L
Sbjct: 64 VHLMIVQPERYIETFAKAGASYITVHWEACTHIHRTLAQIKEAGCKAGVVLNPGTPISVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+DV+++ DMIL+M+VNPGFGGQ+ IE+T+ K + K +I +++ +E+DGGV
Sbjct: 124 DDVLEDADMILLMSVNPGFGGQKFIENTLAKTSRLKDMILRKNSKALIEIDGGVNLETGA 183
Query: 185 SLVQAGADLLVVGSSFFNQ---KGEISYAKRLN 214
LVQAGAD LV GS FN K IS K LN
Sbjct: 184 RLVQAGADALVAGSFVFNAADPKQVISELKVLN 216
>gi|297155756|gb|ADI05468.1| ribulose-phosphate 3-epimerase [Streptomyces bingchenggensis BCW-1]
Length = 244
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 131/222 (59%), Gaps = 4/222 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADFSRL EE + GA +H DVMD FVPN++ G V+ +L +D+
Sbjct: 13 AVQINPSILSADFSRLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVEALGKATDT 70
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 71 PLDCHLMIEDPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPI 130
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+L+MTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV +
Sbjct: 131 DQYEDLLPELDMVLVMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLEMWLQVDGGVAAS 190
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD+ V GS+ + + + L L + A I
Sbjct: 191 TIERCAEAGADVFVAGSAVYGAQDPAKAVEELRGLARQATPI 232
>gi|313623273|gb|EFR93517.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL J1-023]
Length = 218
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENYGADYIHVDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISTFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|329938918|ref|ZP_08288292.1| ribulose-phosphate 3-epimerase [Streptomyces griseoaurantiacus
M045]
gi|329301803|gb|EGG45696.1| ribulose-phosphate 3-epimerase [Streptomyces griseoaurantiacus
M045]
Length = 228
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 131/213 (61%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFARLAEEARAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGASSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LIGK + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLIGKHGLDLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ +AGAD+ V GS+ + + + + L
Sbjct: 180 TIERCAEAGADVFVAGSAVYGAEDPAAAVRALR 212
>gi|319760686|ref|YP_004124624.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia vafer str.
BVAF]
gi|318039400|gb|ADV33950.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia vafer str.
BVAF]
Length = 223
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 136/205 (66%), Gaps = 3/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF++LGEE+ + AGA +HFDVMD +VPN+S G V++SLR+Y
Sbjct: 1 MMNKFLIAPSILSADFAKLGEEVLCVISAGADMLHFDVMDNHYVPNLSIGPMVLKSLRNY 60
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+V D HLMI ID I+ DAG I+FHPE++ +I RS++ I G G+ +NP
Sbjct: 61 GVTVPVDVHLMIKPIDGLISDFVDAGAHCISFHPEATENIDRSIQLIRKHGCGVGLVLNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ VI+++D+I +M+VNPGFGGQ + T+ KIRQ + LI +ISL VDGG
Sbjct: 121 GTTLECLKYVINKVDVITLMSVNPGFGGQVFLPETLNKIRQTRKLINAIDDTISLAVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
+ N ++ ++GA++ ++GS+ FN
Sbjct: 181 INFGNFNAVRESGANIFIIGSAIFN 205
>gi|218778412|ref|YP_002429730.1| Ribulose-phosphate 3-epimerase [Desulfatibacillum alkenivorans
AK-01]
gi|218759796|gb|ACL02262.1| Ribulose-5-phosphate-epimerase [Desulfatibacillum alkenivorans
AK-01]
Length = 219
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE+ + KAGA IH DVMDG FVPNI+ G V +++ +D D
Sbjct: 4 IAPSILSADFARLGEEVQAVEKAGADWIHVDVMDGRFVPNITIGPVVCKAVNRVTDLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ AG D IT ES+ H+ R++ I +G K GV +NP TP++ L
Sbjct: 64 VHLMIKQPELYVEDFVKAGADYITIQVESTTHLNRTVNLIRELGAKPGVVLNPTTPLSSL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E V++ +D++++M+VNPGFGGQ+ I++++ K + +I + ++ +E+DGG+ S+ IK
Sbjct: 124 EWVLEYVDLVMLMSVNPGFGGQKFIDNSLRKTEELANMIQSKGLNALIELDGGINSKTIK 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
S AG D V GS+ F + + K L A
Sbjct: 184 SASDAGCDAFVAGSAIFGSEDYTATIKEFRTLLGEA 219
>gi|269469078|gb|EEZ80633.1| pentose-5-phosphate-3-epimerase [uncultured SUP05 cluster
bacterium]
Length = 223
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGEE+ N+ + GA +HFDVMD +V N++ G V +LR++ +
Sbjct: 7 IAPSILSADFARLGEEVDNVLRDGADIVHFDVMDNHYVNNLTIGPLVCEALRNHGVTAPI 66
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG ITFHPE+S HI ++ I G K G+ NP T +
Sbjct: 67 DAHLMVKPVDRIIPDFASAGATYITFHPEASEHIDGTIGLIKDNGCKAGLVFNPATSLNY 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
LE VID++DMIL+M+VNPGFGGQ I S++ K+R + +I + I LE+DGGV NI
Sbjct: 127 LEHVIDKLDMILLMSVNPGFGGQSFIPSSLDKLRTVRKMIDDKGLDIRLEIDGGVKIDNI 186
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ + AGAD V GS+ FN +
Sbjct: 187 REIAAAGADTFVAGSAIFNTE 207
>gi|323345408|ref|ZP_08085631.1| ribulose-phosphate 3-epimerase [Prevotella oralis ATCC 33269]
gi|323093522|gb|EFZ36100.1| ribulose-phosphate 3-epimerase [Prevotella oralis ATCC 33269]
Length = 216
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 133/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+ L +I I ++ A +H DVMDG FVPNISFG VI ++ D
Sbjct: 5 ISPSLLSADFTNLKADIEMINRSEADWLHMDVMDGVFVPNISFGFPVINAVSKICKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ A G ++ H E+ H+ R+++ IHA G K GVA+NP TP+ +L
Sbjct: 65 VHLMIVQPERYVEQTAKCGAMMMCVHYEACTHLHRTVQEIHAKGMKAGVALNPSTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
ED+I ++DM+L+M+VNPGFGGQ+ IE+ + K+ + + +I G +++ +EVDGGV +
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQKFIENVLQKVARLRHMIELSGSKAL-IEVDGGVQNETA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD+LV GS F I L +L
Sbjct: 184 PKLINAGADVLVSGSYIFRSANPIQTIHELKNL 216
>gi|260912232|ref|ZP_05918784.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633666|gb|EEX51804.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 472 str.
F0295]
Length = 230
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 133/198 (67%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF L E+ I ++ A +H DVMDG FVPNISFG V+ ++ D
Sbjct: 19 IAPSLLSADFLNLNAEVEMINESEADWLHMDVMDGVFVPNISFGFPVLEAVGKACKKPMD 78
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI +++I A AG ++ H E+ H+ R++ IH G K GVA+NP TPV++L
Sbjct: 79 VHFMIVHPENYIEQTAKAGAMLMCVHQEACVHLHRTVAKIHETGMKAGVALNPSTPVSVL 138
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
ED+I+++D++L+M+VNPGFGGQ+ IE+T+ K+++ + LI G +++ +EVDGGV ++
Sbjct: 139 EDIINDVDLVLLMSVNPGFGGQKFIENTLNKVKRLRQLIDSTGSKAL-IEVDGGVQAQTA 197
Query: 184 KSLVQAGADLLVVGSSFF 201
L++AGAD+LV G+ F
Sbjct: 198 PLLIEAGADVLVAGNYVF 215
>gi|116873253|ref|YP_850034.1| ribulose-phosphate 3-epimerase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742131|emb|CAK21255.1| ribulose-phosphate 3-epimerase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 218
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|20339362|gb|AAM19354.1|AF369887_1 ribulose-5-phosphate-3-epimerase [Pisum sativum]
Length = 281
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHIDVMDGRFVPNITIGPLVVDALRPVTDLP 117
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D + AG DII+ H E S H+ R++ + ++G K GV +NP TP
Sbjct: 118 LDVHLMIVEPDQRVPDFIKAGADIISVHCEQSSTIHLHRAVNQVKSLGAKAGVVLNPGTP 177
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGGVT
Sbjct: 178 LSAIEYVLDVVDLVLIMSVNPGFGGQSFIESHVKKIAELRRLCVEKGVNPWIEVDGGVTP 237
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 238 ANAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKAS 273
>gi|325568579|ref|ZP_08144872.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
gi|325157617|gb|EGC69773.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
Length = 215
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 127/204 (62%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSI AD L ++I + + + +H D+MDG FV NI+FG + I ++ S VF
Sbjct: 3 KILPSIFGADIMHLQDDIHFLEEEKTEILHVDLMDGNFVSNIAFGPNQIAEMKKNSKMVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ HI+ + G ++I+ H ES+PHI L+ I G+K GV INP TP AI
Sbjct: 63 DVHMMVQHPKDHIDDVIATGAEMISVHYESTPHIHSILQKIRKAGRKAGVVINPGTPEAI 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE ++D+ID ILIMT+NPG GQ I ++ KIRQ K LIG R I +EVDGGV K
Sbjct: 123 LEYLLDDIDYILIMTINPGQPGQTFIRKSLEKIRQTKELIGDRKIQIEVDGGVNKEIAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+AGA+L+VVG + F+ + Y
Sbjct: 183 CAEAGAELIVVGGALFSGDKKAQY 206
>gi|16800998|ref|NP_471266.1| ribulose-phosphate 3-epimerase [Listeria innocua Clip11262]
gi|16414433|emb|CAC97162.1| lin1932 [Listeria innocua Clip11262]
Length = 218
Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENYGADYIHVDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|315303721|ref|ZP_07874233.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
gi|313627908|gb|EFR96529.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
Length = 218
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHVDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG D IT H E+ H+ R+L+ I G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDMYIPEFAKAGADYITVHVEACTHLHRTLQLIRTYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K +I ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKITAFKQIIDEKELDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K AGA++ V GS + K S +L
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQSPIDKL 212
>gi|241668268|ref|ZP_04755846.1| ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876801|ref|ZP_05249511.1| D-ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842822|gb|EET21236.1| D-ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 222
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
QI PSIL+AD +RLG+++ + +AGA +HFDVMD +VPN++FG V+++LR Y S
Sbjct: 4 FQINPSILSADLARLGDDVQAVLEAGADNVHFDVMDNHYVPNLTFGPMVLKALRDYGISA 63
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G G+A+NP T +
Sbjct: 64 GMDVHLMVKPVDALIESFARAGASSIVFHPEASEHIDRSLQLIKSFGIDAGLALNPATGI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 124 DCLKYVESHIDRVLIMSVNPGFGGQKFIPAMLDKAKEVSQWIKSTGRDILLEIDGGVNPN 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G D V GS+ FN SY + ++ ++
Sbjct: 184 NIAEIAACGVDAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|320355023|ref|YP_004196362.1| ribulose-5-phosphate 3-epimerase [Desulfobulbus propionicus DSM
2032]
gi|320123525|gb|ADW19071.1| ribulose-5-phosphate 3-epimerase [Desulfobulbus propionicus DSM
2032]
Length = 244
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 136/219 (62%), Gaps = 5/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G ++++ R+ +
Sbjct: 27 STMIAPSILSADFSRLGDEIRAVEAAGADVIHVDVMDGHFVPNITIGPLIVKAARAATTL 86
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ D ++ DAG D +T H E+ H+ R+L I A GKK G +NP T +
Sbjct: 87 PLDVHLMITDPDRYLQDFIDAGADWVTVHVEACTHLHRTLSFIRARGKKAGAVLNPATSL 146
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
LE V+ E+D++++M+VNPGFGGQ IES++ KI + + ++ +EVDGG++
Sbjct: 147 TTLEYVLAEVDLVMLMSVNPGFGGQSFIESSLDKIARLRRMLDAVNPEAGIEVDGGISPA 206
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + AGA++ V GS+ + G Y ++ +K+ A
Sbjct: 207 TIGRVADAGANIFVAGSAIY---GHDDYQAAIHTMKERA 242
>gi|217964029|ref|YP_002349707.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|217333299|gb|ACK39093.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|307571400|emb|CAR84579.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes L99]
Length = 218
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|258406077|ref|YP_003198819.1| ribulose-phosphate 3-epimerase [Desulfohalobium retbaense DSM 5692]
gi|257798304|gb|ACV69241.1| ribulose-phosphate 3-epimerase [Desulfohalobium retbaense DSM 5692]
Length = 225
Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 136/220 (61%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I + PS+L++DF+RL EE+ + +AG +H+DVMDG FVPNI+ G VI++ R
Sbjct: 1 MNPCI-VSPSLLSSDFARLAEELQALEQAGVPWVHWDVMDGMFVPNITLGPPVIKAARPK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
FD HLMI +I A AG D+I H E+ H+ R + I G +T VA+NP
Sbjct: 60 CSLFFDVHLMIEDPGRYIESFAAAGADLICVHAEACLHLERVVSQIAEAGCQTAVALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ ++ ++ ++DM+LIM+VNPGFGGQ I ++ KIR + + R + ++VDGGV
Sbjct: 120 TPLEQIDYLLPQLDMVLIMSVNPGFGGQSFIPFSLDKIRGLRHRLDSRRLGTRIQVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN----QKGEISYAKRLN 214
T+ N +V AGAD LV GS+FF Q+G ++ R+
Sbjct: 180 TTANAAEIVTAGADTLVSGSAFFKHPSYQEGLAAFMARMQ 219
>gi|282880287|ref|ZP_06289001.1| ribulose-phosphate 3-epimerase [Prevotella timonensis CRIS 5C-B1]
gi|281305789|gb|EFA97835.1| ribulose-phosphate 3-epimerase [Prevotella timonensis CRIS 5C-B1]
Length = 218
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 132/209 (63%), Gaps = 4/209 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L+ADF+ L +I I ++ A +H DVMDG FVPNISFG VI ++ D H
Sbjct: 9 PSLLSADFTNLQADIDMINQSDADWLHLDVMDGVFVPNISFGFPVIHAVSKICQKPLDVH 68
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
MI + +I A+AG +++ E+ H+ R+++ IH G K GV +NP TPV +LED
Sbjct: 69 FMIVQPERYIQQAAEAGATLMSVQYEACTHLHRTIQQIHDAGMKAGVVLNPATPVHLLED 128
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNIKS 185
+I ++D++L+M+VNPGFGGQ IE+TI K+++ + LI G +++ +EVDGGV
Sbjct: 129 IITDVDLVLLMSVNPGFGGQAFIENTIAKVKRLRKLIDESGAQAL-IEVDGGVQEDTAPR 187
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLN 214
LVQAGAD+LV GS F K I+ L
Sbjct: 188 LVQAGADVLVSGSYVFKAKDPIATIHWLK 216
>gi|47093055|ref|ZP_00230833.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|226224421|ref|YP_002758528.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes Clip81459]
gi|254826140|ref|ZP_05231141.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|254852725|ref|ZP_05242073.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|254933290|ref|ZP_05266649.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|254993904|ref|ZP_05276094.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-064]
gi|255522567|ref|ZP_05389804.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-175]
gi|290893052|ref|ZP_06556041.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|300763869|ref|ZP_07073866.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|47018556|gb|EAL09311.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|225876883|emb|CAS05592.1| Putative ribulose-5-phosphate 3-epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606048|gb|EEW18656.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|290557412|gb|EFD90937.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|293584850|gb|EFF96882.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|293595380|gb|EFG03141.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|300515605|gb|EFK42655.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|313608150|gb|EFR84202.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL F2-208]
gi|328473545|gb|EGF44382.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 220]
gi|332312259|gb|EGJ25354.1| Ribulose-phosphate 3-epimerase [Listeria monocytogenes str. Scott
A]
Length = 218
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|239908524|ref|YP_002955266.1| ribulose-phosphate 3-epimerase [Desulfovibrio magneticus RS-1]
gi|239798391|dbj|BAH77380.1| ribulose-phosphate 3-epimerase [Desulfovibrio magneticus RS-1]
Length = 224
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 142/222 (63%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + PS+L++DF+RL +E++ + AG +H DVMDG FVPNI+FG +I ++R
Sbjct: 1 MTPPFILSPSLLSSDFARLADELAALEAAGLSWVHLDVMDGQFVPNITFGPPLIAAMRKT 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMI + ++ AG D+I H E++ H+ R++ I +G VA+NP
Sbjct: 61 SRLYFDTHLMIERPERYLAEFRAAGSDLICVHAEATVHLERAVAEIARLGAAPAVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP++ +E ++ ++DM+LIMTVNPGFGGQ I + KIR AL +R ++ ++VDGGV
Sbjct: 121 TPLSAVEWLLPQLDMVLIMTVNPGFGGQSFIPFCLDKIRALSALRRERGLAFRIQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
T N +L+ AGAD+LV GS+FF G Y +RL+ +A
Sbjct: 181 TPDNTAALLAAGADVLVSGSAFF---GHPPYKERLDVFHAAA 219
>gi|119964671|gb|ABM17100.1| ribulose-phosphate 3-epimerase [Sulfobacillus acidophilus DSM
10332]
Length = 232
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF L +++ ++ GA IH DVMDG FVPNI+ G V+ +R +D
Sbjct: 8 VLIAPSILSADFGHLADDVRDVVNRGADWIHVDVMDGRFVPNITMGPVVVEGIRPVTDRP 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ A AG + I+ H E++PH+ R+L IH +GK GVA+NP TPV+
Sbjct: 68 LDVHLMIVEPERYLEDFARAGAERISVHAEATPHLHRALEMIHGLGKLAGVALNPSTPVS 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+ V + +D++L+MTVNPGFGGQ I + KIR+ + + ++ ++ +EVDGG+
Sbjct: 128 AIYHVAENLDLVLLMTVNPGFGGQSFIRPMLTKIRETRDWLDRQGLTHVPIEVDGGINPE 187
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
K +++GA ++V GS+ F
Sbjct: 188 TAKWAIESGATVMVAGSAIFR 208
>gi|329770348|ref|ZP_08261731.1| ribulose-phosphate 3-epimerase [Gemella sanguinis M325]
gi|328836706|gb|EGF86362.1| ribulose-phosphate 3-epimerase [Gemella sanguinis M325]
Length = 214
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 131/198 (66%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSIL+ADF+ L +IS + + G H DVMDG FVPNISFG +I ++RS ++ +F
Sbjct: 3 KILPSILSADFANLERDISELEEIGIDMFHIDVMDGNFVPNISFGFPIIEAIRSKTNKIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI++ ++++ AGCD+++FH E++ H R ++ I GKK G+ +NP+TP+
Sbjct: 63 DCHLMIANPENYVERFCQAGCDMVSFHIEATNHADRVIQVIKNCGKKAGIVLNPQTPIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ ++D +LIMTVNPGFGGQ+ I + KI + + K + ++VDGG+ +
Sbjct: 123 VKYLLPKLDYVLIMTVNPGFGGQKFIPEMLEKIEELANIRVKNNYDFLIQVDGGINTETS 182
Query: 184 KSLVQAGADLLVVGSSFF 201
K GADLLV GS F
Sbjct: 183 KLCRDKGADLLVCGSFLF 200
>gi|294811533|ref|ZP_06770176.1| Ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|294324132|gb|EFG05775.1| Ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
Length = 256
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADFSRL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 30 AVQINPSILSADFSRLADEAKAVD--GADWLHVDVMDNHFVPNLTLGVPVVESLGRATDT 87
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI+ D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 88 PLDCHLMIADPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 147
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LIGK + L+VDGGV+
Sbjct: 148 EPYEDLLPELDMLLIMTVEPGFGGQSFLDIMLPKIRRTRELIGKHGLELWLQVDGGVSDA 207
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + L + ++ LA
Sbjct: 208 TIERCAEAGADVFVAGSAVYGADDPARAVRALREKAEATLA 248
>gi|110638008|ref|YP_678215.1| ribulose-phosphate 3-epimerase [Cytophaga hutchinsonii ATCC 33406]
gi|110280689|gb|ABG58875.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Cytophaga hutchinsonii ATCC 33406]
Length = 217
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ I PS+L+ADF+ L ++ I + A H D+MDG FVPNISFG V++++ ++
Sbjct: 3 NVLIAPSVLSADFANLERDVKMINSSKADWFHIDIMDGVFVPNISFGFPVMQAINKHAAK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + + +I D+G I+ H E+ H+ R++ I +G K G+AINP TP+
Sbjct: 63 PLDVHLMIVNPEKYIQTFKDSGAANISVHYEACTHLHRTIYQIKDVGCKAGIAINPHTPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+L+DVI +ID++ +M+VNPGFGGQ+ IE T K+R K LI + ++ +E+DGGV
Sbjct: 123 HLLKDVIKDIDLVCMMSVNPGFGGQKFIEHTYQKVRDLKQLIQENNANVLIEIDGGVNEV 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LVQAGAD+LV G+ F+ K ++ ++L ++
Sbjct: 183 TGPKLVQAGADVLVAGNYVFSAKDPVATIEQLKNI 217
>gi|33865649|ref|NP_897208.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 8102]
gi|33632819|emb|CAE07630.1| ribulose-5-phosphate 3-epimerase [Synechococcus sp. WH 8102]
Length = 258
Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 137/221 (61%), Gaps = 5/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADFSRLG+E+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 34 TKPLVISPSILSADFSRLGDEVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 93
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 94 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKLAGAVLNPST 153
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ LE ++ D++LIM+VNPGFGGQ IE+ + KI + + +R + +EVDGGV
Sbjct: 154 RLDTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKISDLRRMCDERGLDPWIEVDGGVK 213
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ N +++AGA+ +V GS FNQ YA+ + ++ S+
Sbjct: 214 AGNAWKVIEAGANAIVSGSGVFNQP---DYAEAIKGIRNSS 251
>gi|115315133|ref|YP_763856.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica OSU18]
gi|115130032|gb|ABI83219.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica OSU18]
Length = 222
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y +
Sbjct: 4 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITA 63
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G + G+A+NP T +
Sbjct: 64 GMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATDI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 124 DCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPY 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 184 NIAEIAACGVNAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|327313444|ref|YP_004328881.1| ribulose-phosphate 3-epimerase [Prevotella denticola F0289]
gi|326944103|gb|AEA19988.1| ribulose-phosphate 3-epimerase [Prevotella denticola F0289]
Length = 227
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 135/216 (62%), Gaps = 2/216 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L +E+ I ++ A +H DVMDG FVPNISFG VI+++ D
Sbjct: 5 VSPSLLSADFLHLDKEVEMINESEADWLHMDVMDGVFVPNISFGFPVIKAVGKACRKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++I ADAG I+ H E+ H+ R+L+ I A G K GV +NP TPV +L
Sbjct: 65 VHLMIVHPENYIQQTADAGAAIMNVHYEACVHLHRTLQAIRAAGMKAGVTLNPSTPVNVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I +ID++ +M+VNPGFGGQ+ IE +I K+++ + LI + S +EVDGGV +
Sbjct: 125 EDIIGDIDIVQLMSVNPGFGGQKFIEHSIRKVQRLRQLIERESSRALIEVDGGVQAETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
LV AG D+LV GS F + L L+K++
Sbjct: 185 RLVDAGVDILVSGSYVFKADDPKAAIHALKGLRKTS 220
>gi|89256725|ref|YP_514087.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica LVS]
gi|118497806|ref|YP_898856.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
novicida U112]
gi|156502886|ref|YP_001428951.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010919|ref|ZP_02275850.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FSC200]
gi|194323778|ref|ZP_03057554.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
novicida FTE]
gi|208779869|ref|ZP_03247213.1| ribulose-phosphate 3-epimerase [Francisella novicida FTG]
gi|254368030|ref|ZP_04984050.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica 257]
gi|254369584|ref|ZP_04985595.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FSC022]
gi|254373167|ref|ZP_04988656.1| hypothetical protein FTCG_00749 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374616|ref|ZP_04990097.1| D-ribulose-phosphate 3-epimerase [Francisella novicida GA99-3548]
gi|290953310|ref|ZP_06557931.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica URFT1]
gi|295313462|ref|ZP_06804061.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica URFT1]
gi|89144556|emb|CAJ79871.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica LVS]
gi|118423712|gb|ABK90102.1| D-ribulose-phosphate 3-epimerase [Francisella novicida U112]
gi|134253840|gb|EBA52934.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica 257]
gi|151570894|gb|EDN36548.1| hypothetical protein FTCG_00749 [Francisella novicida GA99-3549]
gi|151572335|gb|EDN37989.1| D-ribulose-phosphate 3-epimerase [Francisella novicida GA99-3548]
gi|156253489|gb|ABU61995.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157122538|gb|EDO66673.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FSC022]
gi|194322142|gb|EDX19624.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
novicida FTE]
gi|208744324|gb|EDZ90624.1| ribulose-phosphate 3-epimerase [Francisella novicida FTG]
gi|332678523|gb|AEE87652.1| Ribulose-phosphate 3-epimerase [Francisella cf. novicida Fx1]
Length = 222
Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y +
Sbjct: 4 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITA 63
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G + G+A+NP T +
Sbjct: 64 GMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 124 DCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPY 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 184 NIAEIAACGVNAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|27904954|ref|NP_778080.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|46396626|sp|Q89A59|RPE_BUCBP RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|27904352|gb|AAO27185.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 228
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 135/199 (67%), Gaps = 5/199 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD---SVFD 66
S+L+A+FSRLGE+I ++ K+G+ IH+DVMD +V N++FG V+ SLRS V D
Sbjct: 9 SVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKSMVID 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM +D I A +II+FHPES+ ++ ++++ I + G K G+A+NP TP+ +L
Sbjct: 69 VHLMTCPVDDLIIKFAKLDVNIISFHPESTNNVEKTIKLIKSYGCKVGLALNPLTPLCVL 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
++V+D+ID+IL+M+VNPGF GQ+ I S + KIR + LI K++I LEVDGG+ NI
Sbjct: 129 DNVLDKIDLILLMSVNPGFPGQKFIPSILNKIRIVRELIDKSKKNILLEVDGGINLSNIF 188
Query: 185 SLVQAGADLLVVGSSFFNQ 203
+ G D+ V+GS+ FN
Sbjct: 189 KIASFGTDIFVIGSAIFNS 207
>gi|297195551|ref|ZP_06912949.1| ribulose-phosphate 3-epimerase [Streptomyces pristinaespiralis ATCC
25486]
gi|197721373|gb|EDY65281.1| ribulose-phosphate 3-epimerase [Streptomyces pristinaespiralis ATCC
25486]
Length = 228
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 129/214 (60%), Gaps = 4/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADFSRL EE + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFSRLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLAKATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEDPDRWAPRYIEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALRPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLQLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ +AGAD+ V GS+ + ++L D
Sbjct: 180 TIEQCAEAGADVFVAGSAVYGADDPAEAVRKLRD 213
>gi|315282819|ref|ZP_07871142.1| ribulose-phosphate 3-epimerase [Listeria marthii FSL S4-120]
gi|313613548|gb|EFR87369.1| ribulose-phosphate 3-epimerase [Listeria marthii FSL S4-120]
Length = 218
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHDTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|224124194|ref|XP_002330128.1| predicted protein [Populus trichocarpa]
gi|222871262|gb|EEF08393.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 63 IIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 122
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E + H+ R+L I ++G K GV +NP TP
Sbjct: 123 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTATIHLHRTLNMIKSLGAKAGVVLNPATP 182
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + + ++ ++ +EVDGGV
Sbjct: 183 LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRMCVEKGVNPWIEVDGGVGP 242
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ LV GS+ F G YA+ + +K S
Sbjct: 243 KNAYKVIEAGANALVAGSAVF---GAPDYAEAIRGIKSS 278
>gi|56964078|ref|YP_175809.1| ribulose-phosphate 3-epimerase [Bacillus clausii KSM-K16]
gi|56910321|dbj|BAD64848.1| ribulose-phosphate 3-epimerase [Bacillus clausii KSM-K16]
Length = 215
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 123/201 (61%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSILA DFSR+GE + AGA IH DVMDG FVP I+FG ++ ++R Y+D
Sbjct: 2 IKVAPSILAGDFSRMGETVQACDNAGADWIHVDVMDGQFVPPITFGHQMVEAIRPYTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I AG D ++ H E+S H+ R++ I G K G+ +NP TP
Sbjct: 62 LDVHLMVEQPEKQIAFFQQAGADCLSVHVEASAHLHRTVAAIKEAGMKAGIVLNPGTPAY 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
E V+ ++D +L MTVNPGFGGQ I + I++ +A+I +R + ++VDGG+
Sbjct: 122 AAEPVLADVDYVLQMTVNPGFGGQSFIPGALANIKKLRAMIDERQLPVDIQVDGGINPTT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ VQAGA +LV GS+ F +
Sbjct: 182 AQQCVQAGATILVAGSAVFKE 202
>gi|326440080|ref|ZP_08214814.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
Length = 228
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADFSRL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFSRLADEAKAVD--GADWLHVDVMDNHFVPNLTLGVPVVESLGRATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI+ D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIADPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LIGK + L+VDGGV+
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQSFLDIMLPKIRRTRELIGKHGLELWLQVDGGVSDA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + L + ++ LA
Sbjct: 180 TIERCAEAGADVFVAGSAVYGADDPARAVRALREKAEATLA 220
>gi|291547140|emb|CBL20248.1| ribulose-phosphate 3-epimerase [Ruminococcus sp. SR1/5]
Length = 224
Score = 181 bits (459), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 145/221 (65%), Gaps = 9/221 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGE+I + K G + +H DVMDG FVP+ISFG VI+S+R S+ F
Sbjct: 4 RLCPSILSADFNRLGEQIKILEKEGVEYLHIDVMDGDFVPSISFGMPVIKSIRKESNMFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ + +I + G D IT H E+ + R+L I A G K V+I P TPV
Sbjct: 64 DVHLMVTEPERYIRDFVECGADSITVHAEACEDLERTLEQIRAAGVKAAVSIKPSTPVND 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ +++++DM+LIMTV PGFGGQ+ ++ KI++ + LI + + ++VDGG+ +
Sbjct: 124 ISHLLEDVDMVLIMTVQPGFGGQKYMDECTEKIQELRELIDEEELDVDIQVDGGINDDTL 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS-----YAKRLNDLKKS 219
+++++AGA+L+V GS F KG+++ ++++++KK
Sbjct: 184 ETVMRAGANLMVAGSWVF--KGDVAANVRHITEKIHNIKKE 222
>gi|312898695|ref|ZP_07758085.1| ribulose-phosphate 3-epimerase [Megasphaera micronuciformis F0359]
gi|310620614|gb|EFQ04184.1| ribulose-phosphate 3-epimerase [Megasphaera micronuciformis F0359]
Length = 219
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PS+L+ADFS L E+ +I ++GA +H D+MDG FVPN++FG +I +LR +++
Sbjct: 2 IQIGPSLLSADFSNLKAEVQDIERSGADFLHLDMMDGHFVPNLTFGVPLIAALRKHTNLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM + +I+ +A AG +T H E+ PH+ R L I G K GVA+NP TPV+
Sbjct: 62 FDAHLMTECPEVYIDELAHAGVQYMTVHEEACPHLDRVLHKIKESGMKCGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSR 181
LE + +D+ILIM+VNPGFGGQ+ I + KI + A +G +EVDGG+T+
Sbjct: 122 SLECIASLVDLILIMSVNPGFGGQKFIPYAVDKIGDVTELLATVGNDKAVIEVDGGITAD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
I + AGA +V GS+ F Q
Sbjct: 182 TIGPVTAAGATWIVAGSAVFGQ 203
>gi|46908050|ref|YP_014439.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|46881320|gb|AAT04616.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
Length = 218
Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 125/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRYYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K AGA++ V GS + K
Sbjct: 183 KLCRDAGANVFVAGSYIYGNK 203
>gi|332981570|ref|YP_004463011.1| ribulose-5-phosphate 3-epimerase [Mahella australiensis 50-1 BON]
gi|332699248|gb|AEE96189.1| ribulose-5-phosphate 3-epimerase [Mahella australiensis 50-1 BON]
Length = 222
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 133/201 (66%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++++PSIL+ADF LG I+ + K GA IH DVMDG FVPNIS G +++S++S+ +
Sbjct: 2 VKLIPSILSADFFDLGHAINELQKGGADGIHVDVMDGHFVPNISMGPMMVKSIKSHINMF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I+ + AG D IT H E H R++ I G K +A+NP TP++
Sbjct: 62 MDVHLMIDNPDEYIDAFSKAGADSITVHAEVLRHPLRTIDIIKRNGLKAAIALNPATPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+ ++D DMIL+MTVNPGFGGQQ I S + KI K + R + +++DGG+T N
Sbjct: 122 VLDYIMDAADMILLMTVNPGFGGQQFIPSMLDKIADLKRIKDNRGFNFDIQIDGGITMDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ +++ AGA+++V GS+ NQ
Sbjct: 182 VHAVMAAGANVIVTGSAILNQ 202
>gi|283853668|ref|ZP_06370900.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. FW1012B]
gi|283570939|gb|EFC18967.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. FW1012B]
Length = 224
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 140/222 (63%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + PS+L+ADFSRL +E++ + AG H DVMDG FVPNI+FG VI +LR
Sbjct: 1 MTAPFILSPSLLSADFSRLADELAALAAAGLTWAHLDVMDGLFVPNITFGPPVIAALRRV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMI + ++ DAG D+I H E++ H+ R++ I +G VA+NP
Sbjct: 61 SSLYFDTHLMIERPERYLAAFRDAGADLICVHAEATVHLERTVAEIRRLGAAPAVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T ++ +E ++ E+DM+LIMTVNPGFGGQ + + K+R A+ +R +S ++VDGGV
Sbjct: 121 THLSAVEYLLPELDMVLIMTVNPGFGGQSFLPFCLEKVRTLSAMRRERGLSFRIQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
T N +LV AGAD+LV GS+FF G Y +RL+ +A
Sbjct: 181 TPGNTAALVAAGADVLVSGSAFF---GHPPYKERLDVFHAAA 219
>gi|309389029|gb|ADO76909.1| ribulose-5-phosphate 3-epimerase [Halanaerobium praevalens DSM
2228]
Length = 218
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 134/198 (67%), Gaps = 4/198 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+LAADFS+L +E+ I KA +H DVMDG +VPNISFG+ +I+++R ++ F
Sbjct: 4 EFAPSLLAADFSQLKKELQLIEKA--DYLHLDVMDGVYVPNISFGSGIIKAIREQTELKF 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + +I A++G DI+T H E++ HI R ++ I G K GV++NP T +
Sbjct: 62 DTHLMITKPERYIKDFAESGSDILTVHLEATDHIHRVIQMIKNEGLKAGVSLNPATSLNT 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE ++ E+D +LIM+VNPGFGGQ I KI + K +I + + +EVDGG+ + N+
Sbjct: 122 LEYILPELDQVLIMSVNPGFGGQSYIPQMTAKISKLKKIIEENNYQCKIEVDGGIKAHNL 181
Query: 184 KSLVQAGADLLVVGSSFF 201
+ +V+AGAD++V GS+ F
Sbjct: 182 EKIVKAGADIIVAGSAIF 199
>gi|319789366|ref|YP_004150999.1| ribulose-phosphate 3-epimerase [Thermovibrio ammonificans HB-1]
gi|317113868|gb|ADU96358.1| ribulose-phosphate 3-epimerase [Thermovibrio ammonificans HB-1]
Length = 222
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + PSIL+ADF+RL +E+S + +AGA +H DVMDG FVPNI+ G V+ SLR
Sbjct: 1 MVP--MLAPSILSADFARLAQEVSAVERAGADLLHVDVMDGRFVPNITVGIPVVESLRQV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLMI + +I AG D ++FH E++ H R + I +G K G+ INP
Sbjct: 59 TELPLDVHLMIVEPERYIPAFVKAGADWVSFHFEAAVHHHRIVEQIKELGAKAGIVINPS 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TPV L +++ +D +L+M+VNPGFGGQ+ I +++ KIR+ + L + + SL EVDGGV
Sbjct: 119 TPVDFLVEILPFLDFVLVMSVNPGFGGQKFIPTSLGKIRRLRELAVELNPSLVIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN---QKGEISYAKRLN 214
N++ +++AGAD++V GS+ F + ++ ++LN
Sbjct: 179 KLSNVEDVLKAGADVVVAGSAVFKGNPAENVAAFKEKLN 217
>gi|225874149|ref|YP_002755608.1| ribulose-phosphate 3-epimerase [Acidobacterium capsulatum ATCC
51196]
gi|225792644|gb|ACO32734.1| ribulose-phosphate 3-epimerase [Acidobacterium capsulatum ATCC
51196]
Length = 223
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 130/200 (65%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+++PSILA+DF+RL +E+ G IH DVMDG FVPN++ G +++SLR ++
Sbjct: 2 IELLPSILASDFARLADEVHAAEAGGGTVIHVDVMDGHFVPNLTLGPPLVKSLRKHTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ D + A+AG + ++ H E+ PH+ RSL I G + GV INP TPV
Sbjct: 62 FDVHMMVERPDDFVAAFAEAGANWMSVHYEACPHLHRSLSLIREHGMEPGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ V+ + +L+M+VNPGFGGQ+ I ++ KIR+ K L + ++ +EVDGGV +
Sbjct: 122 VILPVLPMVHHVLVMSVNPGFGGQKFIPFSLDKIRRLKELRQELGLTFRIEVDGGVDAET 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I S+V AGADLLV GS+ F
Sbjct: 182 IASVVTAGADLLVAGSAVFG 201
>gi|317470723|ref|ZP_07930108.1| ribulose-phosphate 3-epimerase [Anaerostipes sp. 3_2_56FAA]
gi|316901858|gb|EFV23787.1| ribulose-phosphate 3-epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 215
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 129/209 (61%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++ PSI AAD L +I + +G + +H DVMDG FV ++FGAD IR+L+S +D
Sbjct: 3 EMKLSPSIFAADLGELKSQIKELEDSGVELLHVDVMDGHFVERMAFGADHIRALKSMTDI 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + HI+ IADAG DIIT H ES+ + L I G + G+ ++P TP
Sbjct: 63 PLDVHLMIERPEVHIDSIADAGADIITIHQESTARVLSCLHKIRNRGIRAGIVLSPGTPE 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ ++D++DMIL+M+VNPG GGQ + ST+ KI+ +A+IG R I LEVDG + I
Sbjct: 123 ETIKYLLDDVDMILLMSVNPGEGGQHFLNSTVEKIKNVRAMIGDRDIDLEVDGSIDHETI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKR 212
K +AGA++ V G F E + A R
Sbjct: 183 KPCYEAGANVFVSGGYLFKNIKENTEALR 211
>gi|256599950|pdb|3INP|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of D-Ribulose-
Phosphate 3-Epimerase From Francisella Tularensis
Length = 246
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y +
Sbjct: 28 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITA 87
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G + G+A+NP T +
Sbjct: 88 GMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGI 147
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 148 DCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPY 207
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 208 NIAEIAVCGVNAFVAGSAIFNSD---SYKQTIDKMR 240
>gi|300869948|ref|YP_003784819.1| ribulose-phosphate 3-epimerase [Brachyspira pilosicoli 95/1000]
gi|300687647|gb|ADK30318.1| ribulose-phosphate 3-epimerase [Brachyspira pilosicoli 95/1000]
Length = 215
Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 133/212 (62%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL A F+ L I + +AGA +H D+MDG FVP I+FG+ ++ ++ +
Sbjct: 4 IIIAPSILTASFANLESTIKELEEAGADYLHLDIMDGSFVPQITFGSKIVSDIKKITSLP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI S + HI+ A AG DII+ H E + H+ + + I + K G+ +NP T V
Sbjct: 64 LDVHLMIVSPEKHIDDFAKAGADIISVHYEGNIHLHKLIMQIKSHNVKAGIVLNPHTRVD 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E +ID+ID +LIM+VNPGFGGQ+ I ++I KI + K LIG+R I + VDGG+
Sbjct: 124 VIEPLIDDIDNVLIMSVNPGFGGQKFITNSIKKIEETKKLIGQREIIISVDGGINLNTCS 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++AGA+LLV GS+ + K + K+L +
Sbjct: 184 DVIKAGANLLVAGSAIIDSKDKKETIKQLRNF 215
>gi|325856684|ref|ZP_08172322.1| ribulose-phosphate 3-epimerase [Prevotella denticola CRIS 18C-A]
gi|325483398|gb|EGC86373.1| ribulose-phosphate 3-epimerase [Prevotella denticola CRIS 18C-A]
Length = 227
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 135/216 (62%), Gaps = 2/216 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L +E+ I ++ A +H DVMDG FVPNISFG VI+++ D
Sbjct: 5 VSPSLLSADFLHLDKEVEMINESEADWLHMDVMDGVFVPNISFGFPVIKAVGQACRKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++I ADAG I+ H E+ H+ R+L+ I A G K GV +NP TPV +L
Sbjct: 65 VHLMIVHPENYIQQTADAGAAIMNVHYEACVHLHRTLQAIRAAGMKAGVTLNPSTPVNVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I +ID++ +M+VNPGFGGQ+ IE +I K+++ + LI + S +EVDGGV +
Sbjct: 125 EDIIGDIDIVQLMSVNPGFGGQKFIEHSIRKVQRLRQLIERESSRALIEVDGGVQAETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
LV AG D+LV GS F + L L+K++
Sbjct: 185 RLVDAGVDILVSGSYVFKADDPKAAIHVLKGLRKTS 220
>gi|241889704|ref|ZP_04777002.1| ribulose-phosphate 3-epimerase [Gemella haemolysans ATCC 10379]
gi|241863326|gb|EER67710.1| ribulose-phosphate 3-epimerase [Gemella haemolysans ATCC 10379]
Length = 214
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 129/198 (65%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSIL+ADF+ L +I + G H DVMDG FVPNISFG +I S+R +D VF
Sbjct: 3 KILPSILSADFANLERDIKELESIGIDMFHIDVMDGNFVPNISFGFPIIESIRPKTDKVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI++ ++++ GCD+++FH E++ H R ++ I GKK G+ +NP+TP+
Sbjct: 63 DCHLMIANPENYVEQFCKVGCDMVSFHIEATNHADRVIQVIKNNGKKAGIVLNPQTPIES 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ +++ +LIMTVNPGFGGQ+ I + KI + L +++ + +EVDGG+
Sbjct: 123 IKYLLPKLNYVLIMTVNPGFGGQKFIPEMLEKIEELAKLREEKNYNFLIEVDGGINIETS 182
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ GADLLV GS F
Sbjct: 183 KACRDKGADLLVCGSFLF 200
>gi|332305105|ref|YP_004432956.1| ribulose-phosphate 3-epimerase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172434|gb|AEE21688.1| ribulose-phosphate 3-epimerase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 225
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 138/216 (63%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++ G + ++LR Y +
Sbjct: 6 IAPSILSADFARLGAEVDAVLAAGADVIHFDVMDNHYVPNLTIGPMICKALRDYGVTAEI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +I+FHPE+S H+ RS++ I G K G+ INP T +
Sbjct: 66 DVHLMVEPVDEMIASFAKAGASMISFHPEASRHVDRSIQLITDSGCKPGLVINPGTSLDC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ + ++ +L+M+VNPGFGGQ I T+ K++ K L+ R I +E+DGGV NI
Sbjct: 126 LDYTLHKLHHVLLMSVNPGFGGQSFIPETLDKLQIVKELVKASGRDIRIEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+++ +AGAD+ V GS+ FNQ Y + ++++++
Sbjct: 186 RAIAEAGADMFVAGSAIFNQP---DYRQVIDEMREE 218
>gi|288928321|ref|ZP_06422168.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 317 str.
F0108]
gi|288331155|gb|EFC69739.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 317 str.
F0108]
Length = 217
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 137/213 (64%), Gaps = 7/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF L E+ I ++ A +H DVMDG FVPNISFG V+ ++ D
Sbjct: 6 IAPSLLSADFLNLNAEVQMINESEADWLHMDVMDGTFVPNISFGFPVLDAVGKACKKPMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI +++I A AG ++ H E+ H+ R++ IH G K GVA+NP TPV +L
Sbjct: 66 VHFMIVHPENYIEQTAKAGAMLMCVHQEACVHLHRTVAKIHETGMKAGVALNPSTPVNVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
ED+I+++D++L+M+VNPGFGGQ+ IE+T+ K+++ + LI G +++ +EVDGGV ++
Sbjct: 126 EDIINDVDLVLLMSVNPGFGGQKFIENTLNKVKRLRQLIDSTGSKAL-IEVDGGVQAQTA 184
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
L++AGAD+LV G+ F N K I K L
Sbjct: 185 PLLIEAGADVLVAGNYVFKSANPKETIHQLKSL 217
>gi|56707900|ref|YP_169796.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670371|ref|YP_666928.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis FSC198]
gi|134301646|ref|YP_001121614.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187931752|ref|YP_001891737.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254370391|ref|ZP_04986396.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis FSC033]
gi|56604392|emb|CAG45422.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320704|emb|CAL08805.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis FSC198]
gi|134049423|gb|ABO46494.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151568634|gb|EDN34288.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis FSC033]
gi|187712661|gb|ACD30958.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|282159085|gb|ADA78476.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis NE061598]
Length = 222
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y +
Sbjct: 4 IQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITA 63
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G + G+A+NP T +
Sbjct: 64 GMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 124 DCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPY 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 184 NIAEIAVCGVNAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|225574504|ref|ZP_03783114.1| hypothetical protein RUMHYD_02581 [Blautia hydrogenotrophica DSM
10507]
gi|225038291|gb|EEG48537.1| hypothetical protein RUMHYD_02581 [Blautia hydrogenotrophica DSM
10507]
Length = 233
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 131/199 (65%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+ PSIL+ADF+RLGE+I + +AG K +H DVMDG FVP+ISFG VI+S+R S F
Sbjct: 12 QLCPSILSADFNRLGEQIQMLERAGVKWLHIDVMDGDFVPSISFGMPVIKSIRKESSMFF 71
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ +I + G D IT H E+ + R+++ I G + GV+I P TPV
Sbjct: 72 DVHLMVTEPGRYIQDFVECGADSITVHTEACEDLERTIQMIRDSGVRVGVSIKPATPVHD 131
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR--QAKALIGKRSISLEVDGGVTSRNI 183
+ ++++DM+LIMTVNPGFGGQ+ +E T KI+ + + S+ ++VDGG+ +
Sbjct: 132 ISHFLEDVDMVLIMTVNPGFGGQKYMEETTEKIQELRELIEEEELSVDIQVDGGINRETL 191
Query: 184 KSLVQAGADLLVVGSSFFN 202
++++AGA+L+V GS FN
Sbjct: 192 PTVLRAGANLVVAGSYVFN 210
>gi|237714419|ref|ZP_04544900.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D1]
gi|262408249|ref|ZP_06084796.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_22]
gi|294643618|ref|ZP_06721421.1| ribulose-phosphate 3-epimerase [Bacteroides ovatus SD CC 2a]
gi|294806133|ref|ZP_06764985.1| ribulose-phosphate 3-epimerase [Bacteroides xylanisolvens SD CC 1b]
gi|298480267|ref|ZP_06998465.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D22]
gi|229445583|gb|EEO51374.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D1]
gi|262353801|gb|EEZ02894.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_22]
gi|292641052|gb|EFF59267.1| ribulose-phosphate 3-epimerase [Bacteroides ovatus SD CC 2a]
gi|294446647|gb|EFG15262.1| ribulose-phosphate 3-epimerase [Bacteroides xylanisolvens SD CC 1b]
gi|295086557|emb|CBK68080.1| ribulose-5-phosphate 3-epimerase [Bacteroides xylanisolvens XB1A]
gi|298273548|gb|EFI15111.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D22]
Length = 216
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 136/213 (63%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + + ++L++L
Sbjct: 184 ARLVEAGADALVAGNAVFGAQDPVEMIRQLHEL 216
>gi|189218621|ref|YP_001939262.1| Pentose-5-phosphate-3-epimerase [Methylacidiphilum infernorum V4]
gi|189185479|gb|ACD82664.1| Pentose-5-phosphate-3-epimerase [Methylacidiphilum infernorum V4]
Length = 235
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 7/213 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFG---ADVIRSL 57
M I+I PSIL+ADF+RL +AGA +H DVMDG FVPNI+ G + + L
Sbjct: 4 MRKEIKIAPSILSADFARLEAHAKEALEAGADWLHIDVMDGHFVPNITIGPLIVEALNPL 63
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ + + D HLMI + D +I A AG DIIT H E+ PH+ R+++ IH +G K GV +
Sbjct: 64 KRVTGTTLDVHLMIENPDRYIPDFARAGADIITVHVETCPHLHRTVQLIHDLGVKAGVTL 123
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVD 175
NP TP+ LE+++ D+ L+M+VNPGFGGQ+ I ++ K+ + + ++ + LE+D
Sbjct: 124 NPATPLVTLEEILPYADLFLVMSVNPGFGGQEYIPTSTNKVARLREMLDRVDSRAWLEID 183
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
GGV N +V AGAD+LV GS+ F KG++
Sbjct: 184 GGVKPSNAAEIVLAGADVLVAGSAVF--KGQVK 214
>gi|269925408|ref|YP_003322031.1| ribulose-phosphate 3-epimerase [Thermobaculum terrenum ATCC
BAA-798]
gi|269789068|gb|ACZ41209.1| ribulose-phosphate 3-epimerase [Thermobaculum terrenum ATCC
BAA-798]
Length = 232
Score = 181 bits (458), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 130/201 (64%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGE++ AGA IH+DVMDG FVPNIS G + +++ +
Sbjct: 9 LKIAPSILSADFTRLGEQVQEAEAAGADYIHYDVMDGHFVPNISMGPYIAEAVKRSTSLP 68
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I AG DIIT H E+ H+ R++ I +G K GVAINP TP
Sbjct: 69 LDVHLMIEDPDRYIPDFVSAGADIITVHYEAVVHLHRTVMRIRDLGAKAGVAINPSTPPF 128
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+L++++ +++IL+M+VNPGFGGQ I +++ K+++ + +I R I LEVDGG+
Sbjct: 129 MLDEILPFVNLILVMSVNPGFGGQHFIPTSLQKLKRLRMMIDDRRYDIELEVDGGIDPNT 188
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ + +GA +LV GS+ F Q
Sbjct: 189 AEPVAASGARVLVAGSAIFGQ 209
>gi|81428309|ref|YP_395309.1| ribulose-phosphate 3-epimerase [Lactobacillus sakei subsp. sakei
23K]
gi|78609951|emb|CAI54998.1| Ribulose-phosphate 3-epimerase [Lactobacillus sakei subsp. sakei
23K]
Length = 220
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 133/218 (61%), Gaps = 7/218 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF L ++ N+ AGA +H D+MDG FVPN+SFGA V+ +R +
Sbjct: 3 QIAPSILSADFMNLQRDVQNLEAAGADLLHIDIMDGMFVPNMSFGAQVVSGIRPLTQLGL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + +I AG D+I H E++ H+ R L+ I G K GV INP TPV+
Sbjct: 63 DVHLMVEQPERYIEQFITAGSDLIMIHAEATEHLYRGLQMIKDAGVKAGVVINPGTPVSY 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRN 182
+E V+ +D +L+MTVNPGFGGQ+ I + + K+ + A + ++EVDGGV +
Sbjct: 123 IESVLPLVDQVLVMTVNPGFGGQKFIPAMLTKVAELAAYREAHADADFTIEVDGGVNDQT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + +AGAD+ V GS F G++ A R+ LKK+A
Sbjct: 183 IAACAKAGADVFVAGSYTF--AGDL--ATRIETLKKAA 216
>gi|259047431|ref|ZP_05737832.1| ribulose-phosphate 3-epimerase [Granulicatella adiacens ATCC 49175]
gi|259035622|gb|EEW36877.1| ribulose-phosphate 3-epimerase [Granulicatella adiacens ATCC 49175]
Length = 235
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 121/183 (66%), Gaps = 2/183 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++++ PSIL+A+F+ LGE++ + K GA IH D MDG FVPN++ G +++ LR +D
Sbjct: 21 NMKVAPSILSANFATLGEDVKKVEKLGADWIHIDAMDGQFVPNLTLGPNIVEGLRPVTDL 80
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V DCHLM+ + + I A AG D I+ H E++PHI R+L+ I A G K GV INP TPV
Sbjct: 81 VLDCHLMVQNPERFIPQFAKAGADYISVHVEATPHIHRALQAIKAEGVKAGVVINPGTPV 140
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ + V+ E+D++L+MTVNPGFGGQ I T+ K+R+ AL ++ +EVDGGV
Sbjct: 141 SAISAVLSEVDLVLVMTVNPGFGGQSFIPETLDKVRELVALREEKGYHYLIEVDGGVNGE 200
Query: 182 NIK 184
K
Sbjct: 201 TAK 203
>gi|330813358|ref|YP_004357597.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486453|gb|AEA80858.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 218
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 133/199 (66%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL++DF +L EI I AGA IH DVMDG FVPNI+ GA V+++LR ++
Sbjct: 4 IKISPSILSSDFGQLSTEIKKIEDAGADMIHVDVMDGHFVPNITIGAPVVKALRKHTSLP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ + ++ A AG DIIT HPE++ ++ +++ I ++GKK GV+INPETP+
Sbjct: 64 FDVHLMIAPVHKYVKDFAAAGADIITVHPEATDNLLQTIELIKSLGKKAGVSINPETPLD 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+ V+ ID+ LIM+VNPGFGGQ+ I + K++ + I + + + +E+DGG+
Sbjct: 124 SIFPVLHLIDLALIMSVNPGFGGQKFIPEVLSKVKILREKIDEENLEVEIEIDGGINFET 183
Query: 183 IKSLVQAGADLLVVGSSFF 201
K +AG D+LV G++ F
Sbjct: 184 GKLAKEAGVDILVSGTTLF 202
>gi|71900811|ref|ZP_00682930.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Ann-1]
gi|71729432|gb|EAO31544.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Ann-1]
Length = 223
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 133/200 (66%), Gaps = 5/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY +
Sbjct: 6 IAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG +I+FH E+S H+ +++ I + G G+ NP TPV +
Sbjct: 66 DVHLMVEPVDRIVPDFAQAGASMISFHMEASRHVHLTIQLIKSHGCMAGLVFNPATPVDM 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA---LIGKRSISLEVDGGVTSRN 182
L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + L+G R + L+VDGGV N
Sbjct: 126 LDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLG-RPVRLQVDGGVGIDN 184
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I ++ +AGAD V GS+ F+
Sbjct: 185 IGAIAEAGADTFVAGSAIFH 204
>gi|15240250|ref|NP_200949.1| RPE; catalytic/ ribulose-phosphate 3-epimerase [Arabidopsis
thaliana]
gi|30697525|ref|NP_851240.1| RPE; catalytic/ ribulose-phosphate 3-epimerase [Arabidopsis
thaliana]
gi|4102703|gb|AAD09954.1| ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|9757862|dbj|BAB08496.1| ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|15027997|gb|AAK76529.1| putative ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|20259209|gb|AAM14320.1| putative ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|332010080|gb|AED97463.1| D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|332010081|gb|AED97464.1| D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
Length = 281
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 117
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 118 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTP 177
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGVT
Sbjct: 178 LSAIEYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTP 237
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 238 ANAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKAS 273
>gi|317495107|ref|ZP_07953477.1| ribulose-phosphate 3-epimerase [Gemella moribillum M424]
gi|316914529|gb|EFV36005.1| ribulose-phosphate 3-epimerase [Gemella moribillum M424]
Length = 214
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 129/198 (65%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSIL+ADF+ L ++ + + G H DVMDG FVPNISFG +I ++RS +D +F
Sbjct: 3 KILPSILSADFANLERDVRELEQIGIDMFHIDVMDGNFVPNISFGFPIIEAIRSKTDKIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI+ + ++ +AGCD+++FH E++ H R ++ I GKK G+ +NP+TP+
Sbjct: 63 DCHLMIARPEEYVERFCNAGCDMVSFHIEATNHADRVIQIIKNSGKKAGMVLNPQTPIES 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ ++D +LIMTVNPGFGGQ+ I + KI + + ++ S ++VDGGV
Sbjct: 123 VKYLLPKLDYVLIMTVNPGFGGQKFIPEMLEKIEELAKIREEKGYSFLIQVDGGVNVETS 182
Query: 184 KSLVQAGADLLVVGSSFF 201
K GADLLV GS F
Sbjct: 183 KLCRDKGADLLVCGSFLF 200
>gi|257784534|ref|YP_003179751.1| ribulose-phosphate 3-epimerase [Atopobium parvulum DSM 20469]
gi|257473041|gb|ACV51160.1| ribulose-phosphate 3-epimerase [Atopobium parvulum DSM 20469]
Length = 224
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 140/222 (63%), Gaps = 4/222 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ + PS+L+ DFS+L E+ +I A A IH+DVMDG FVPNISFG D+ + SD
Sbjct: 3 NVLVAPSVLSTDFSKLKSELDSI--ANADYIHYDVMDGHFVPNISFGPDIFSYCKKSSDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+++ + D G D++TFH E+ H R + I G K G+++ P TPV
Sbjct: 61 PIDVHLMVTNPAEIAPLFLDRGADVVTFHYEAELHAHRLVHLIKDSGAKAGISLCPGTPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LED+I+++D++LIMTVNPGFGGQ+ I +I K++ K L K +++ +EVDGG++
Sbjct: 121 SVLEDLIEDLDLVLIMTVNPGFGGQKFIPHSIEKLKALKELCRKHNVNPLIEVDGGISEA 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
N +V AGA++LV GS+ F Q S + + +S L I
Sbjct: 181 NAADVVVAGANMLVAGSAVFGQVDRGSTIETIRSAGESVLTI 222
>gi|281424247|ref|ZP_06255160.1| ribulose-phosphate 3-epimerase [Prevotella oris F0302]
gi|281401516|gb|EFB32347.1| ribulose-phosphate 3-epimerase [Prevotella oris F0302]
Length = 217
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 128/198 (64%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L +EI I + A +H D+MDG FVPNISFG V+ ++ D
Sbjct: 5 VSPSLLAADFLNLKDEIEMINNSQADWLHMDIMDGVFVPNISFGFPVLEAVSKVCKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV++L
Sbjct: 65 VHFMIVHPEQYIEQTAKLGAMMMNVHYETCTHLHRTIQQIHAAGMKAGVTLNPSTPVSML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
ED+I ++DM+L+M+VNPGFGGQ+ IE+TI K+++ + +I G ++ +E+DGGV
Sbjct: 125 EDIIYDVDMVLLMSVNPGFGGQKFIENTIRKVKRLRKMIDDAGTHTL-IEIDGGVQGETA 183
Query: 184 KSLVQAGADLLVVGSSFF 201
LV+AGAD+LV GS F
Sbjct: 184 PRLVKAGADVLVSGSYVF 201
>gi|300728231|ref|ZP_07061599.1| ribulose-phosphate 3-epimerase [Prevotella bryantii B14]
gi|299774466|gb|EFI71090.1| ribulose-phosphate 3-epimerase [Prevotella bryantii B14]
Length = 216
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+A+F L ++ I ++ A +H D+MDG FVPNISFG V+ ++ Y D
Sbjct: 5 VSPSLLSANFIDLKSDVEMINRSEADWLHMDIMDGVFVPNISFGFPVLEAVGKYCQKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++I+ +A +G ++ H E+ H+ R+++ IH G K GV +NP TPV++L
Sbjct: 65 VHLMIVHPENYIDQVAKSGAMLMNVHYEACTHLHRTIQQIHDAGMKAGVTLNPATPVSVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++D++L+M+VNPGFGGQ+ IE+TI K+++ + LI K +E+DGGV
Sbjct: 125 EDIITDVDLVLLMSVNPGFGGQKFIENTIGKLKRLRELIDKSGSKALIEIDGGVNGETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV GS F + L +L
Sbjct: 185 RLVKAGADVLVSGSYVFKAQTPEDVIHHLKEL 216
>gi|299141007|ref|ZP_07034145.1| ribulose-phosphate 3-epimerase [Prevotella oris C735]
gi|298577973|gb|EFI49841.1| ribulose-phosphate 3-epimerase [Prevotella oris C735]
Length = 217
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 128/198 (64%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L +EI I + A +H D+MDG FVPNISFG V+ ++ D
Sbjct: 5 VSPSLLAADFLNLKDEIEMINNSQADWLHMDIMDGVFVPNISFGFPVLEAVSKVCKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV++L
Sbjct: 65 VHFMIVHPEQYIEQTAKLGAMMMNVHYETCTHLHRTIQQIHAAGMKAGVTLNPSTPVSML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
ED+I ++DM+L+M+VNPGFGGQ+ IE+TI K+++ + +I G ++ +E+DGGV
Sbjct: 125 EDIIYDVDMVLLMSVNPGFGGQKFIENTIRKVKRLRKMIDDAGTHTL-IEIDGGVQDETA 183
Query: 184 KSLVQAGADLLVVGSSFF 201
LV+AGAD+LV GS F
Sbjct: 184 PRLVKAGADVLVSGSYVF 201
>gi|300778475|ref|ZP_07088333.1| ribulose-phosphate 3-epimerase [Chryseobacterium gleum ATCC 35910]
gi|300503985|gb|EFK35125.1| ribulose-phosphate 3-epimerase [Chryseobacterium gleum ATCC 35910]
Length = 216
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 127/197 (64%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF L EI + + A H DVMDG FVPNISFG V+++++ ++ D
Sbjct: 6 IAPSLLSADFGNLQREIEMLNNSQADWFHVDVMDGRFVPNISFGFPVMKTVQQHAKKFVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++ + G D+++ H E+ H+ R++ I G K GV +NP TPV +L
Sbjct: 66 VHLMIVEPEKYVDEFINLGADLVSVHYEACTHLHRTIHHIQNKGAKAGVVLNPSTPVLML 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
ED+I ++D++L+M+VNPGFGGQ+ IE+T KI + K LI + +EVDGGV N
Sbjct: 126 EDIIADVDLVLLMSVNPGFGGQKFIENTYKKIAETKDLILSNNSTALIEVDGGVNLDNAS 185
Query: 185 SLVQAGADLLVVGSSFF 201
L +AGAD+LV G++ F
Sbjct: 186 KLFEAGADVLVAGNAVF 202
>gi|27467815|ref|NP_764452.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis ATCC
12228]
gi|251810652|ref|ZP_04825125.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876346|ref|ZP_06285213.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis SK135]
gi|293366813|ref|ZP_06613489.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|27315359|gb|AAO04494.1|AE016746_284 ribulose-phosphate 3-epimerase [Staphylococcus epidermidis ATCC
12228]
gi|251805812|gb|EES58469.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295371|gb|EFA87898.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis SK135]
gi|291319114|gb|EFE59484.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329729963|gb|EGG66354.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis VCU144]
gi|329736296|gb|EGG72568.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis VCU028]
Length = 214
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 134/216 (62%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PS+L+ DF L EE+ + A +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 2 VKILPSLLSIDFLNLKEELQLLETAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN+ A+ G D+I+ H ES+ HI R++ I +GKK GV INP T V
Sbjct: 62 IDVHLMIEQPENYINLFAEHGADMISVHVESTTHIHRAIEQIKQLGKKAGVVINPGTSVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ +D +L+MTVNPGFGGQ IE + KI Q L + ++ +EVDGG+ +
Sbjct: 122 TILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K V+ GA +LV GS FF Q+ YAK + LK+
Sbjct: 182 SKRCVEQGATMLVTGSYFFKQE---DYAKVTSLLKE 214
>gi|318057053|ref|ZP_07975776.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SA3_actG]
gi|318078494|ref|ZP_07985826.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SA3_actF]
gi|333028381|ref|ZP_08456445.1| putative ribulose-phosphate 3-epimerase [Streptomyces sp. Tu6071]
gi|332748233|gb|EGJ78674.1| putative ribulose-phosphate 3-epimerase [Streptomyces sp. Tu6071]
Length = 228
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 2 AVQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGTPIVEALAKATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEEPDRWAPAYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + L+ K + L +VDGGV++
Sbjct: 120 EQYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLVAKHGLDLWVQVDGGVSAE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ +AGAD+ V GS+ + K S + L
Sbjct: 180 TVERCAEAGADVFVAGSAVYGAKDPASAVRGLR 212
>gi|295839960|ref|ZP_06826893.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SPB74]
gi|197696795|gb|EDY43728.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SPB74]
Length = 228
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 126/203 (62%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 2 AVQINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGTPIVEALAKATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEEPDRWAPAYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + L+ + + L +VDGGV++
Sbjct: 120 EQYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLVARHGLDLWVQVDGGVSAE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
++ +AGAD+ V GS+ + K
Sbjct: 180 TVERCAEAGADVFVAGSAVYGAK 202
>gi|297797095|ref|XP_002866432.1| hypothetical protein ARALYDRAFT_919384 [Arabidopsis lyrata subsp.
lyrata]
gi|297312267|gb|EFH42691.1| hypothetical protein ARALYDRAFT_919384 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 117
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 118 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTP 177
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGVT
Sbjct: 178 LSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVTP 237
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 238 ANAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKAS 273
>gi|302517943|ref|ZP_07270285.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SPB78]
gi|302426838|gb|EFK98653.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SPB78]
Length = 229
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 2 AVQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGTPIVEALAKATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEEPDRWAPAYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + L+ K + L +VDGGV++
Sbjct: 120 EQYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLVAKHGLDLWVQVDGGVSAE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ +AGAD+ V GS+ + K S + L
Sbjct: 180 TVERCAEAGADVFVAGSAVYGAKDPASAVRGLR 212
>gi|329736611|gb|EGG72877.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis VCU045]
Length = 214
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 134/216 (62%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PS+L+ DF L EE+ + A +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 2 VKILPSLLSIDFLNLKEELQLLETAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN+ A+ G D+I+ H ES+ HI R++ I +GKK GV INP T V
Sbjct: 62 IDVHLMIEKPENYINLFAEHGADMISVHVESTTHIHRAIEQIKQLGKKAGVVINPGTSVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ +D +L+MTVNPGFGGQ IE + KI Q L + ++ +EVDGG+ +
Sbjct: 122 TILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K V+ GA +LV GS FF Q+ YAK + LK+
Sbjct: 182 SKRCVEQGATMLVTGSYFFKQE---DYAKVTSLLKE 214
>gi|161075791|gb|ABX56643.1| ribulose-phosphate 3-epimerase [Methylacidiphilum infernorum V4]
Length = 232
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 7/213 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFG---ADVIRSL 57
M I+I PSIL+ADF+RL +AGA +H DVMDG FVPNI+ G + + L
Sbjct: 1 MRKEIKIAPSILSADFARLEAHAKEALEAGADWLHIDVMDGHFVPNITIGPLIVEALNPL 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ + + D HLMI + D +I A AG DIIT H E+ PH+ R+++ IH +G K GV +
Sbjct: 61 KRVTGTTLDVHLMIENPDRYIPDFARAGADIITVHVETCPHLHRTVQLIHDLGVKAGVTL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVD 175
NP TP+ LE+++ D+ L+M+VNPGFGGQ+ I ++ K+ + + ++ + LE+D
Sbjct: 121 NPATPLVTLEEILPYADLFLVMSVNPGFGGQEYIPTSTNKVARLREMLDRVDSRAWLEID 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
GGV N +V AGAD+LV GS+ F KG++
Sbjct: 181 GGVKPSNAAEIVLAGADVLVAGSAVF--KGQVK 211
>gi|330684633|gb|EGG96338.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis VCU121]
Length = 214
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 133/210 (63%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+++PS+L+ DF L +E+ + +AG +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 3 KVLPSLLSVDFLNLKDELVKLEEAGVDGLHFDVMDGQFVPNISIGIPILDAVRQQSKLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I + AD G D+I+ H E++ HI R++ I GKK GV INP TPV+
Sbjct: 63 DVHLMIENPEQYIELFADHGADLISVHLEATAHIHRAIEQIKNKGKKAGVVINPGTPVSQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +I+ +D +LIMTVNPGFGGQ IE + K+ + L ++ ++ +EVDGG+ +
Sbjct: 123 ILPIINTVDYVLIMTVNPGFGGQSFIEDCVDKVLELNTLKNEKQLTFDIEVDGGINAETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ V+ GA +LV GS FF Q + ++L
Sbjct: 183 EVCVKNGATMLVTGSYFFKQDDYQAVTQKL 212
>gi|167746313|ref|ZP_02418440.1| hypothetical protein ANACAC_01022 [Anaerostipes caccae DSM 14662]
gi|167654306|gb|EDR98435.1| hypothetical protein ANACAC_01022 [Anaerostipes caccae DSM 14662]
Length = 221
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 129/209 (61%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I++ PS+ AAD L +I + ++ + +H DVMDG FV ++FGAD IR+L+S +D
Sbjct: 9 KIKLSPSVFAADLGELKNQIKELEESNVELLHVDVMDGHFVERMAFGADHIRALKSMTDI 68
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + HI+ IA+AG DIIT H ES+ + L I G + G+ ++P TP
Sbjct: 69 PLDVHLMIECPEVHIDSIAEAGADIITIHQESTARVLSCLHKIRNRGIRAGIVLSPGTPE 128
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ ++D++DMIL+M+VNPG GGQ + ST+ KIR +A+IG R I LEVDG + I
Sbjct: 129 ETIKYLLDDVDMILLMSVNPGEGGQHFLNSTVEKIRNVRAMIGDRDIDLEVDGSIDHETI 188
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKR 212
K +AGA++ V G F E + A R
Sbjct: 189 KPCYEAGANVFVSGGYLFKNIKENTEALR 217
>gi|293375002|ref|ZP_06621297.1| ribulose-phosphate 3-epimerase [Turicibacter sanguinis PC909]
gi|292646412|gb|EFF64427.1| ribulose-phosphate 3-epimerase [Turicibacter sanguinis PC909]
Length = 214
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILAADFS L EE+ + GA IH DVMDG FVPNI+ G +++ LR ++
Sbjct: 2 LKIAPSILAADFSMLAEEVKCVDALGADYIHIDVMDGHFVPNITLGPGIVKCLRPHTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I +AG DIIT H E+ H+ R+L+ I GV +NP TP+
Sbjct: 62 FDVHLMIEEPDQYIKEFVEAGADIITVHVEACRHLHRTLQLIKQYNIACGVVLNPHTPLE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSR 181
+++ V++++D IL+M+VNPGFGGQ I ++ KI Q + G + +EVDGGV
Sbjct: 122 MIKHVLNDVDWILVMSVNPGFGGQSFISDSLNKIATLNQWREEFGYEYL-IEVDGGVNEE 180
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
+ QAGAD++V GS+ FN
Sbjct: 181 TARLCEQAGADVVVAGSAVFN 201
>gi|3264792|gb|AAC24710.1| ribulose-phosphate 3-epimerase mature form [Expression vector
pFL506]
Length = 237
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 14 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 73
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 74 LDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGTP 133
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGVT
Sbjct: 134 LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGGVTP 193
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 194 ANAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKAS 229
>gi|317503451|ref|ZP_07961489.1| ribulose-phosphate 3-epimerase [Prevotella salivae DSM 15606]
gi|315665439|gb|EFV05068.1| ribulose-phosphate 3-epimerase [Prevotella salivae DSM 15606]
Length = 217
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 130/212 (61%), Gaps = 4/212 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+LAADF L +EI I + A +H DVMDG FVPNISFG ++ ++ D H
Sbjct: 7 PSLLAADFLHLKDEIEMINNSEADWLHLDVMDGFFVPNISFGFPILEAVSKVCKKPLDVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
MI + +I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV +LED
Sbjct: 67 FMIVHPEQYIEQTAKIGAMMMNVHYEACTHLHRTIQQIHAAGMKAGVTLNPSTPVFMLED 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNIKS 185
+I ++DM+L+M+VNPGFGGQ+ IE+TI K+ + + LI G ++ +EVDGGV +
Sbjct: 127 IIRDVDMVLLMSVNPGFGGQKFIENTIRKVERLRRLINETGSHAL-IEVDGGVQAETAPR 185
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
LV+AG D+LV GS F + + L LK
Sbjct: 186 LVKAGVDVLVSGSYVFKSTDPYATIEALKKLK 217
>gi|325843352|ref|ZP_08167935.1| ribulose-phosphate 3-epimerase [Turicibacter sp. HGF1]
gi|325489381|gb|EGC91754.1| ribulose-phosphate 3-epimerase [Turicibacter sp. HGF1]
Length = 214
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILAADFS L EE+ + GA IH DVMDG FVPNI+ G +++ LR ++
Sbjct: 2 LKIAPSILAADFSMLAEEVKCVDALGADYIHIDVMDGHFVPNITLGPGIVKCLRPHTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I +AG DIIT H E+ H+ R+L+ I GV +NP TP+
Sbjct: 62 FDVHLMIEEPDQYIKEFVEAGADIITVHVEACRHLHRTLQLIKQYNIACGVVLNPHTPLE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSR 181
+++ V++++D IL+M+VNPGFGGQ I ++ KI Q + G + +EVDGGV
Sbjct: 122 MIKHVLNDVDWILVMSVNPGFGGQSFISDSLNKITTLNQWREEFGYEYL-IEVDGGVNEE 180
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
+ QAGAD++V GS+ FN
Sbjct: 181 TARLCEQAGADVVVAGSAVFN 201
>gi|21674488|ref|NP_662553.1| ribulose-phosphate 3-epimerase [Chlorobium tepidum TLS]
gi|21647678|gb|AAM72895.1| ribulose-phosphate 3-epimerase [Chlorobium tepidum TLS]
Length = 220
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L + KAGA +H DVMDG FVPNI+FG+ ++++++ + V D
Sbjct: 8 LAPSILSADFTNLKASVELAEKAGADWMHCDVMDGIFVPNITFGSFIVQAIKQCTSIVID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I A AG D IT H E+ PH+ R+++ I ++G K GV+INP TPV++L
Sbjct: 68 THLMIVDPDKYIEDFAKAGSDQITVHLEACPHLHRTIQLIKSLGVKAGVSINPATPVSLL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E V+ ++D++L+M+VNPGFGGQ+ I I KI Q A+ + + + + VDGGVT N
Sbjct: 128 EPVLADLDLVLLMSVNPGFGGQKFIPGAIKKIMQLDAMRMEMNPEMVIAVDGGVTEENAA 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+V AGAD L+ G++FF ++ AK+L L+
Sbjct: 188 MIVDAGADALIAGTAFFRAPDPVAAAKKLKGLE 220
>gi|21672783|ref|NP_660850.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091192|sp|Q8K940|RPE_BUCAP RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|21623431|gb|AAM68061.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 228
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 132/198 (66%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
+ SIL+ADF+RLGE+ AG+ IHFDVMD +VPN++ G ++++LR+Y+ +V
Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A+AG D ITFHPES+ HI R+L I G K G+A+NP T +
Sbjct: 66 DVHLMVKPVDNLIPQFAEAGADFITFHPESTDHIDRTLNLIKECGCKAGLALNPATSLNF 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++++D+IL+M+VNPGFG Q + ++ K+R+ + I S I LEVDGGV NI
Sbjct: 126 LDYVMEKLDLILLMSVNPGFGNQSFLPTSFNKLREVRKKIELNSSNILLEVDGGVKLENI 185
Query: 184 KSLVQAGADLLVVGSSFF 201
+ +GA++ V+GS F
Sbjct: 186 SEVAFSGANVFVIGSGIF 203
>gi|2833386|sp|Q43157|RPE_SPIOL RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
AltName: Full=Pentose-5-phosphate 3-epimerase;
Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
Precursor
gi|1162980|gb|AAC41677.1| ribulose-5-phosphate 3-epimerase [Spinacia oleracea]
gi|3264788|gb|AAC24708.1| ribulose-phosphate 3-epimerase [Spinacia oleracea]
gi|1587969|prf||2207382A D-ribulose-5-phosphate 3-epimerase
Length = 285
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 62 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 121
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 122 LDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGTP 181
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGVT
Sbjct: 182 LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGGVTP 241
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 242 ANAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKAS 277
>gi|329767165|ref|ZP_08258693.1| ribulose-phosphate 3-epimerase [Gemella haemolysans M341]
gi|328837890|gb|EGF87515.1| ribulose-phosphate 3-epimerase [Gemella haemolysans M341]
Length = 214
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 129/198 (65%), Gaps = 2/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSIL+ADF+ L +I + G H DVMDG FVPNISFG +I ++R +D +F
Sbjct: 3 KILPSILSADFANLERDIKELENIGIDMFHIDVMDGNFVPNISFGFPIIEAIRPKTDKIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI++ ++++ GCD+++FH E++ H R ++ I GKK GV +NP+TP+
Sbjct: 63 DCHLMIANPENYVEQFCKVGCDMVSFHIEATNHADRLIQVIKDNGKKAGVVLNPQTPLES 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ ++D +LIMTVNPGFGGQ+ I + KI + + +++ + +EVDGG+
Sbjct: 123 IKYLLPKLDYVLIMTVNPGFGGQKFIPEMLEKIEELGKIRKEKNYNFLIEVDGGINVETS 182
Query: 184 KSLVQAGADLLVVGSSFF 201
K+ GADLLV GS F
Sbjct: 183 KACRDKGADLLVCGSFLF 200
>gi|297559834|ref|YP_003678808.1| ribulose-phosphate 3-epimerase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844282|gb|ADH66302.1| ribulose-phosphate 3-epimerase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 223
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 136/221 (61%), Gaps = 3/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF+ L +E + ++ + A +H DVMD FVPN++ G ++ SL +D+
Sbjct: 2 AIQISPSILSADFAHLADEAAAVSPS-ADWLHVDVMDNHFVPNLTLGLPIVESLLKATDT 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H +++ R+LR I +G + G+A+NP PV
Sbjct: 61 PLDCHLMIEEPDRWAPAYAEAGAGSVTIHAKAAGAPVRTLREIRRLGARAGLALNPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
D++ E+DM+L+MTV PGFGGQ+ ++ +PKIR+A+ ++ R S+ L+VDGGV+
Sbjct: 121 EPYADLVGEMDMLLLMTVEPGFGGQKFLDVVLPKIRRAREILDSREASVWLQVDGGVSDE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + + L L A A
Sbjct: 181 TIERAAEAGADVFVAGSAVYGAQDPAKAVESLRALATGAAA 221
>gi|145202297|gb|ABF06653.2| ribulose-phosphate 3-epimerase [Lactobacillus reuteri]
Length = 217
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + KAGA +H DVMDG FVP+IS+G ++++R ++ V
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVEKAGAPYLHIDVMDGTFVPSISYGPGFVKAIRPITNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 62 LDVHLMVESPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ + +EVDGGV +
Sbjct: 122 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKEEKGYNFDIEVDGGVNDKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA + V GS FN + K L D K
Sbjct: 182 VVDCYKAGATVAVAGSYVFNAEDPAERIKALEDATK 217
>gi|149370111|ref|ZP_01889962.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[unidentified eubacterium SCB49]
gi|149356602|gb|EDM45158.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[unidentified eubacterium SCB49]
Length = 219
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 133/215 (61%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PS+LAADF+ L ++ + + A H DVMDG FVPNIS+G VI++++ ++
Sbjct: 3 NIIIAPSMLAADFANLQRDVEMVNASEADWFHIDVMDGHFVPNISYGMPVIQAIKKHATK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I A G DIIT H ES+ H+ R+L I G K GV +N TPV
Sbjct: 63 PLDVHLMIEKPERYIEEFAKVGADIITVHYESTVHLHRTLTQIEDAGCKAGVVLNLTTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LED++ + M+LIM++NPGFGGQ+ E T K+++ + +I ++ + +E+DGGVT +
Sbjct: 123 SVLEDILPKCYMVLIMSINPGFGGQKFEEITYNKVKKLRKMIDEQGLDTHIEIDGGVTDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N K L+ AGA LV GS F + K + L
Sbjct: 183 NAKKLMDAGATALVAGSYIFKSENPTETIKGMKKL 217
>gi|3264790|gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expression vector
pFL505]
Length = 285
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 62 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 121
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 122 LDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGTP 181
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGVT
Sbjct: 182 LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGGVTP 241
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 242 ANAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKAS 277
>gi|88607073|ref|YP_504641.1| ribulose-phosphate 3-epimerase [Anaplasma phagocytophilum HZ]
gi|88598136|gb|ABD43606.1| ribulose-phosphate 3-epimerase [Anaplasma phagocytophilum HZ]
Length = 236
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 137/202 (67%), Gaps = 2/202 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + + S+L+ADFS L EEI+ ++ AGA +H DVMDGCFVP+++ G VI +R +
Sbjct: 20 TGGVVVSASMLSADFSNLREEIAAVSTAGADWLHIDVMDGCFVPSLTMGPVVISGIRKCT 79
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLMI+ H+ + DAG D+IT H ES H+ R ++ I GKK GV+I P+T
Sbjct: 80 NMFLDVHLMINRPGDHLKSVVDAGADMITVHAESEVHLCRLIKQIKLYGKKVGVSIVPKT 139
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
++LE +I ++D++L+M+V+PGFGGQ +E + KI + +I + S + + VDGGV+
Sbjct: 140 HHSVLEYIIHDLDVVLVMSVDPGFGGQAFLEPQLKKIEHIRKMIEESSSTAKIAVDGGVS 199
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
+ N +++++AGA++LVVG++ F
Sbjct: 200 TDNARAVIEAGANILVVGTALF 221
>gi|312885680|ref|ZP_07745315.1| ribulose-phosphate 3-epimerase [Mucilaginibacter paludis DSM 18603]
gi|311301887|gb|EFQ78921.1| ribulose-phosphate 3-epimerase [Mucilaginibacter paludis DSM 18603]
Length = 228
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL A+F+ L ++I + ++ A IH DVMDG FVPNISFG VI++++ ++ D
Sbjct: 16 ISPSILTANFANLQKDIDMLNQSQADWIHVDVMDGVFVPNISFGFAVIKAIKQFAQKPLD 75
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ +AG D IT H E+ H+ R++ I +G + GVA+NP TPVA+L
Sbjct: 76 VHLMIVDPDRYLEEFKNAGADGITVHYEACTHLNRTINKIKELGCRAGVALNPHTPVALL 135
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+D+I ++D++LIM+VNPGFG Q+ + +T KI K L R+ + +E+DGGV + N
Sbjct: 136 DDIIADLDLVLIMSVNPGFGAQKFLSNTYKKIADLKKLCALRNPELYIEIDGGVDAGNAA 195
Query: 185 SLVQAGADLLVVGSSFF 201
L+ GA++LV G++ F
Sbjct: 196 QLINTGANVLVAGNAVF 212
>gi|302561753|ref|ZP_07314095.1| ribulose-phosphate 3-epimerase [Streptomyces griseoflavus Tu4000]
gi|302479371|gb|EFL42464.1| ribulose-phosphate 3-epimerase [Streptomyces griseoflavus Tu4000]
Length = 228
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 133/224 (59%), Gaps = 6/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P QI PSIL+ADF+RL +E + AGA +H DVMD FVPN++ G V+ SL
Sbjct: 1 MAP--QISPSILSADFARLSDEAKAV--AGADWLHVDVMDNHFVPNLTLGVPVVESLARA 56
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ DCHLMI + D +AG +TFH E++ R R I A G + +A+ P
Sbjct: 57 TDTPLDCHLMIEAPDRWAPQFVEAGAGSVTFHVEAATAPVRLAREIRAKGARASMALRPA 116
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV
Sbjct: 117 TPVEPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGV 176
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
++ I+ AGAD+ V GS+ + + L + ++A A
Sbjct: 177 SAATIEQCADAGADVFVAGSAVYGAADPADAVRALRNQAEAATA 220
>gi|197124465|ref|YP_002136416.1| ribulose-phosphate 3-epimerase [Anaeromyxobacter sp. K]
gi|220919195|ref|YP_002494499.1| Ribulose-phosphate 3-epimerase [Anaeromyxobacter dehalogenans
2CP-1]
gi|196174314|gb|ACG75287.1| Ribulose-phosphate 3-epimerase [Anaeromyxobacter sp. K]
gi|219957049|gb|ACL67433.1| Ribulose-phosphate 3-epimerase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 224
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 138/222 (62%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL+ADF RL EE+ + AGA IH DVMDG FVPNI+ G V+ ++R
Sbjct: 1 MPLPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + ++ A AG D+++ H E SPH+ R+L+ I A G + VA+NP
Sbjct: 61 TKLPVDAHLMIVEPEKYVEAFAKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T + +E V+ + +M+L+MTVNPGFGGQ+ IE+ K+R+ +A+ R ++L EVDGGV
Sbjct: 121 TDLTAVEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRRLRAMADARGLALEIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV G++ F G Y + + ++ +A
Sbjct: 181 KPETAAKVAAAGANVLVAGTAVF---GAPDYRQAIAGIRAAA 219
>gi|227544375|ref|ZP_03974424.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri CF48-3A]
gi|300909764|ref|ZP_07127225.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri SD2112]
gi|227185638|gb|EEI65709.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri CF48-3A]
gi|300893629|gb|EFK86988.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri SD2112]
Length = 231
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + KAGA +H DVMDG FVP+IS+G ++++R ++ V
Sbjct: 16 IKVAPSILSADYVNLQKDIEKVEKAGAPYLHIDVMDGTFVPSISYGPGFVKAIRPITNMV 75
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 76 LDVHLMVESPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 135
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ + +EVDGGV +
Sbjct: 136 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKEEKGYNFDIEVDGGVNDKT 195
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA + V GS FN + K L D K
Sbjct: 196 VVDCYKAGATVAVAGSYVFNAEDPAERIKALEDATK 231
>gi|298255259|ref|ZP_06978845.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae str.
Canada MDR_19A]
Length = 294
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRQEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGA 191
+AGA
Sbjct: 185 AQAKEAGA 192
>gi|29833422|ref|NP_828056.1| ribulose-phosphate 3-epimerase [Streptomyces avermitilis MA-4680]
gi|29610545|dbj|BAC74591.1| putative ribulose-phosphate 3-epimerase [Streptomyces avermitilis
MA-4680]
Length = 228
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 131/222 (59%), Gaps = 4/222 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 2 AVQINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPIVEALARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEDADRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD+ V GS+ + + L + A A+
Sbjct: 180 TIERCAEAGADVFVAGSAVYGAADPADAVRALRTQAEGATAL 221
>gi|4105561|gb|AAD09955.1| ribulose-5-phosphate-3-epimerase [Oryza sativa]
Length = 274
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 139/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 51 IIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 110
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 111 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATP 170
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++ V+D +D++LIM+VNPGFGGQ IES + KI + + + ++ ++ +EVDGGV
Sbjct: 171 LTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRKYVAEKGVNPWIEVDGGVGP 230
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ +V GS+ F G YA+ + +K S
Sbjct: 231 KNAYKVIEAGANAIVAGSAVF---GAPDYAEAIKGIKTS 266
>gi|148544391|ref|YP_001271761.1| ribulose-5-phosphate 3-epimerase [Lactobacillus reuteri DSM 20016]
gi|184153755|ref|YP_001842096.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri JCM 1112]
gi|194466501|ref|ZP_03072488.1| Ribulose-phosphate 3-epimerase [Lactobacillus reuteri 100-23]
gi|148531425|gb|ABQ83424.1| ribulose-5-phosphate 3-epimerase [Lactobacillus reuteri DSM 20016]
gi|183225099|dbj|BAG25616.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri JCM 1112]
gi|194453537|gb|EDX42434.1| Ribulose-phosphate 3-epimerase [Lactobacillus reuteri 100-23]
Length = 217
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + KAGA +H DVMDG FVP+IS+G ++++R ++ V
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVEKAGAPYLHIDVMDGTFVPSISYGPGFVKAIRPITNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 62 LDVHLMVESPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ + +EVDGGV +
Sbjct: 122 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKEEKGYNFDIEVDGGVNDKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA + V GS FN + K L D K
Sbjct: 182 VVDCYKAGATVAVAGSYVFNAEDPSERIKALEDATK 217
>gi|57866768|ref|YP_188371.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis RP62A]
gi|242242504|ref|ZP_04796949.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis W23144]
gi|57637426|gb|AAW54214.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis RP62A]
gi|242234078|gb|EES36390.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis W23144]
gi|319401485|gb|EFV89695.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis FRI909]
Length = 214
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 134/216 (62%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PS+L+ DF L EE+ + A +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 2 VKILPSLLSIDFLNLKEELQLLEAAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN+ A+ G D+I+ H E++ HI R++ I +GKK GV INP T V
Sbjct: 62 IDVHLMIEQPENYINLFAEHGADMISVHVEATTHIHRAIEQIKQLGKKAGVVINPGTSVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ +D +L+MTVNPGFGGQ IE + KI Q L + ++ +EVDGG+ +
Sbjct: 122 TILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K V+ GA +LV GS FF Q+ YAK + LK+
Sbjct: 182 SKRCVEQGATMLVTGSYFFKQE---DYAKVTSLLKE 214
>gi|115450991|ref|NP_001049096.1| Os03g0169100 [Oryza sativa Japonica Group]
gi|109940150|sp|Q9ZTP5|RPE_ORYSJ RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
AltName: Full=Pentose-5-phosphate 3-epimerase;
Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
Precursor
gi|19071636|gb|AAL84303.1|AC073556_20 ribulose-5-phosphate-3-epimerase [Oryza sativa Japonica Group]
gi|108706393|gb|ABF94188.1| Ribulose-phosphate 3-epimerase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113547567|dbj|BAF11010.1| Os03g0169100 [Oryza sativa Japonica Group]
gi|215692683|dbj|BAG88103.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215694711|dbj|BAG89902.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708731|dbj|BAG94000.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192168|gb|EEC74595.1| hypothetical protein OsI_10180 [Oryza sativa Indica Group]
gi|222624266|gb|EEE58398.1| hypothetical protein OsJ_09567 [Oryza sativa Japonica Group]
Length = 274
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 139/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 51 IIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 110
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 111 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATP 170
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++ V+D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGGV
Sbjct: 171 LTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRLCAEKGVNPWIEVDGGVGP 230
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ +V GS+ F G YA+ + +K S
Sbjct: 231 KNAYKVIEAGANAIVAGSAVF---GAPDYAEAIKGIKTS 266
>gi|70726694|ref|YP_253608.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus
JCSC1435]
gi|68447418|dbj|BAE05002.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus
JCSC1435]
Length = 214
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 134/216 (62%), Gaps = 9/216 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF L EI + +A +HFDVMDG FVPNIS G ++ S+R+ +
Sbjct: 3 KIYPSLLSADFLNLENEIKALEEAQIDGLHFDVMDGQFVPNISIGIPILDSVRAATQLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +IN A+ G D+I+ H E++ HI R+L+ I GKK GV INP TPV
Sbjct: 63 DVHLMIEQPEQYINTFAEHGADMISVHVEATQHIHRALQMIKNAGKKAGVVINPGTPVES 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL----EVDGGVTSR 181
L V++ +D +L+MTVNPGFGGQ IE+ K++ + L ++S++L EVDGG+ +
Sbjct: 123 LLPVLEIVDYVLVMTVNPGFGGQSFIEACAAKVKILRDL--RQSLNLNFNIEVDGGINNE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
IK V GAD+ V GS FF Q+ Y K LK
Sbjct: 181 TIKICVDNGADMFVTGSYFFKQE---DYGKVTQLLK 213
>gi|331004334|ref|ZP_08327809.1| ribulose-phosphate 3-epimerase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411400|gb|EGG90815.1| ribulose-phosphate 3-epimerase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 219
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 137/213 (64%), Gaps = 5/213 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+LAA+F L ++ + + + +H DVMDG FVP+ISFG VI SLR D F
Sbjct: 4 NIAPSLLAANFFDLSSQMKLLKEGNIEILHLDVMDGMFVPSISFGMPVISSLRKSVDFFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + +I +G + IT H E+ HI R++ I + G ++G++INP TPV+
Sbjct: 64 DVHMMVENPERYIEDFYKSGANGITIHFEACKHIDRTISQIKSFGLRSGISINPATPVSF 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+++I E+DM+LIM+VNPGFGGQ+ I +I KI++ + +R+ ++VDGGV NI
Sbjct: 124 LQNIISEVDMVLIMSVNPGFGGQKFIPYSIDKIKELSKMRAERNQKFLIQVDGGVDVNNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEI-SYAKRLND 215
KSL AG D V GSS F KG+I + K LND
Sbjct: 184 KSLSDAGVDEFVAGSSVF--KGDILNNIKALND 214
>gi|312793234|ref|YP_004026157.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180374|gb|ADQ40544.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 221
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 131/206 (63%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL++DF+ L E+ + AGA +H DVMDG FV +I+ GA V+RSLR SD
Sbjct: 3 IKIAPSILSSDFADLKSELKKLELAGADLVHIDVMDGNFVDSITIGAPVVRSLRKNSDLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TPV
Sbjct: 63 FDVHLMVLHPEKHIEKFVQSGADNITVHAEATYHLDALISKIKSFGKKASVALNPATPVY 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E+V+ +DM+L+MTVNPG+GGQ+ I T+ KI L K +S +EVDGG+
Sbjct: 123 MIENVLGIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGLSFEIEVDGGINEET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
I V AGA+++V GS F+ G++S
Sbjct: 183 IVDCVNAGANVIVAGSYVFDS-GDVS 207
>gi|109896987|ref|YP_660242.1| ribulose-phosphate 3-epimerase [Pseudoalteromonas atlantica T6c]
gi|109699268|gb|ABG39188.1| ribulose-5-phosphate 3-epimerase [Pseudoalteromonas atlantica T6c]
Length = 228
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 130/200 (65%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++ G + ++LR Y +
Sbjct: 6 IAPSILSADFARLGAEVDAVLAAGADVIHFDVMDNHYVPNLTIGPMICKALRDYGVTADI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +I+FHPE+S H+ RS++ I G K G+ +NP T +
Sbjct: 66 DVHLMVEPVDEMIVSFAKAGASLISFHPEASRHVDRSIQLITDSGCKPGLVLNPATSLDC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ + ++ IL+M+VNPGFGGQ I T+ K++ K ++ R I +E+DGGV NI
Sbjct: 126 LDYTLHKLHHILLMSVNPGFGGQAFIPETLDKLQIVKKMVQACGRDIRIEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+++ +AGAD+ V GS+ FNQ
Sbjct: 186 RAIAEAGADMFVAGSAIFNQ 205
>gi|325261905|ref|ZP_08128643.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
gi|324033359|gb|EGB94636.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
Length = 220
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 135/204 (66%), Gaps = 4/204 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LGE+I + GA+ +HFDVMDG FVP+ISFG V++S++ S V D
Sbjct: 5 LAPSILSADFKILGEQIRITSDHGAEYLHFDVMDGMFVPSISFGMPVLKSIQGVSSQVMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ ++ +AG DI+T H E+ ++ L IHA G K GV+I P TPV L
Sbjct: 65 VHLMVTDPGRYVEDFQEAGADILTVHLEACEDVQAVLDKIHACGIKAGVSIKPATPVEEL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
V+D+ +M LIM+V PGFGGQ I ++ KI+ ++++ +R ++ +EVDGG+ N+K
Sbjct: 125 LPVLDQAEMFLIMSVEPGFGGQAFIPESLEKIKNLRSMLDERGLNADIEVDGGIYQSNVK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
++ AGA+++V GS+ F KG I+
Sbjct: 185 EVLDAGANIIVAGSAVF--KGGIA 206
>gi|225848864|ref|YP_002729028.1| ribulose-phosphate 3-epimerase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643845|gb|ACN98895.1| ribulose-phosphate 3-epimerase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 220
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFS+LG++I + +AGA IH D+MDG +VPNI+FG V+ S+R ++ FD
Sbjct: 4 LAPSILSADFSKLGQQIKEVEEAGADIIHLDIMDGRYVPNITFGIPVVESIRPITNLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + AG D+I+FH +++ H R + I + G K GV +NP TPV L
Sbjct: 64 AHLMIVEPEKYALDFIKAGVDMISFHMDATIHSHRLVDLIKSNGAKAGVVLNPATPVNTL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
E++I ID +LIM+VNPGFGGQ+ I T K+++ L+ G+ I +E+DGGV+ NI
Sbjct: 124 EEIIHYIDYVLIMSVNPGFGGQKFIPQTAEKVKKLILLMEQTGRTDILIEIDGGVSKENI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEI 207
L G ++ V GS+ F KG+I
Sbjct: 184 NYLSMLGVNIFVAGSAVF--KGDI 205
>gi|260171880|ref|ZP_05758292.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D2]
gi|315920192|ref|ZP_07916432.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694067|gb|EFS30902.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 216
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 136/213 (63%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSQKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F + ++L++L
Sbjct: 184 ARLVEAGADVLVAGNAVFAAPDPEAMIRQLHEL 216
>gi|227363184|ref|ZP_03847318.1| ribulose-5-phosphate 3-epimerase [Lactobacillus reuteri MM2-3]
gi|325682711|ref|ZP_08162227.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri MM4-1A]
gi|227071790|gb|EEI10079.1| ribulose-5-phosphate 3-epimerase [Lactobacillus reuteri MM2-3]
gi|324977061|gb|EGC14012.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri MM4-1A]
Length = 231
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + KAGA +H DVMDG FVP+IS+G ++++R ++ V
Sbjct: 16 IKVAPSILSADYVNLQKDIEKVEKAGAPYLHIDVMDGTFVPSISYGPGFVKAIRPITNMV 75
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 76 LDVHLMVESPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 135
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ + +EVDGGV +
Sbjct: 136 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKEEKGYNFDIEVDGGVNDKT 195
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA + V GS FN + K L D K
Sbjct: 196 VVDCYKAGATVAVAGSYVFNAEDPSERIKALEDATK 231
>gi|251771504|gb|EES52081.1| Ribulose-phosphate 3-epimerase [Leptospirillum ferrodiazotrophum]
Length = 229
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 132/215 (61%), Gaps = 9/215 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF RLGE++ +AGA H D+MDG FVPN++FG V+ L+ +
Sbjct: 10 LLIAPSILSADFLRLGEQVREAAEAGADLFHLDMMDGHFVPNLTFGPPVVEGLQKLTSLP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+ + ++ +A A +T H E++ H+ L I ++G K GVAI+P TPV
Sbjct: 70 LEAHLMVLRPEIYLEDLASARMHRVTVHAEATTHLHYVLGKIGSLGMKAGVAISPATPVG 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
++EDV+D ID++L+MTVNPGFGGQ I ++ K+ + L+ G + LEVDGG+ +
Sbjct: 130 MVEDVLDMIDLVLVMTVNPGFGGQSFITHSLKKVESMRTLLDRAGAAHVRLEVDGGIKAG 189
Query: 182 NIKSLVQAGADLLVVGSSFFNQK------GEISYA 210
NI + GAD V+GS+ F +K GEI A
Sbjct: 190 NISRVADCGADTFVMGSAIFGEKPCETVFGEIRRA 224
>gi|312876954|ref|ZP_07736929.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor lactoaceticus
6A]
gi|311796269|gb|EFR12623.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor lactoaceticus
6A]
Length = 221
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 130/206 (63%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL++DF+ L E+ + AGA +H DVMDG FV +I+ GA V+RSLR SD
Sbjct: 3 IKIAPSILSSDFADLKSELKKLELAGADLVHIDVMDGNFVDSITIGAPVVRSLRKNSDLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TPV
Sbjct: 63 FDVHLMVLHPEKHIEKFVQSGADNITVHAEATYHLDALISKIKSFGKKASVALNPATPVY 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E+V+ +DM+L+MTVNPG+GGQ+ I T+ KI L K S +EVDGG+
Sbjct: 123 MIENVLGIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGFSFEIEVDGGINEET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
I V AGA+++V GS F+ G++S
Sbjct: 183 IVDCVNAGANVIVAGSYVFDS-GDVS 207
>gi|255690470|ref|ZP_05414145.1| ribulose-phosphate 3-epimerase [Bacteroides finegoldii DSM 17565]
gi|260623919|gb|EEX46790.1| ribulose-phosphate 3-epimerase [Bacteroides finegoldii DSM 17565]
Length = 216
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 135/213 (63%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF +L ++I I ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFGQLAKDIEMINRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + +L+DL
Sbjct: 184 ARLVEAGADALVAGNAVFAAPDPEAMIHQLHDL 216
>gi|34541246|ref|NP_905725.1| ribulose-phosphate 3-epimerase [Porphyromonas gingivalis W83]
gi|188994382|ref|YP_001928634.1| putative ribulose-phosphate 3-epimerase [Porphyromonas gingivalis
ATCC 33277]
gi|34397562|gb|AAQ66624.1| ribulose-phosphate 3-epimerase [Porphyromonas gingivalis W83]
gi|188594062|dbj|BAG33037.1| putative ribulose-phosphate 3-epimerase [Porphyromonas gingivalis
ATCC 33277]
Length = 218
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 129/200 (64%), Gaps = 2/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L +++ I ++ A +H DVMDG FVPN+SFG ++ ++R D
Sbjct: 5 VSPSLLSADFLHLADDVEMINRSEADWLHIDVMDGVFVPNLSFGFPILEAIRPICKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI ++ +A+ G ++ H E+SPH+ RSL I G K+GV +NP TPV +L
Sbjct: 65 VHLMIVEPMKFVDRLAELGVYMMNVHYEASPHLHRSLAAIRKAGMKSGVTLNPHTPVEVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
DV++E DM+L+M+VNPGFGGQ+ IE TI K ++ + +I + + +++DGGV + K
Sbjct: 125 TDVLEEADMVLLMSVNPGFGGQKFIERTIDKTQRLRRMIDSQGLDTIVQIDGGVNAATGK 184
Query: 185 SLVQAGADLLVVGSSFFNQK 204
L++AGAD LV GS F +
Sbjct: 185 RLIEAGADSLVAGSYVFGAE 204
>gi|225569227|ref|ZP_03778252.1| hypothetical protein CLOHYLEM_05309 [Clostridium hylemonae DSM
15053]
gi|225162026|gb|EEG74645.1| hypothetical protein CLOHYLEM_05309 [Clostridium hylemonae DSM
15053]
Length = 220
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 131/198 (66%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF+ LGEE+ + GAK +HFDVMDG FVP+ISFG V+RS+ + +D V D
Sbjct: 5 LAPSILAADFTVLGEEMKRTAENGAKYLHFDVMDGMFVPSISFGMPVLRSIHNVTDQVMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ DAG DI+T H E+ + +L I G K G+++ PET + +
Sbjct: 65 AHLMVQDPIRYVEDFKDAGADIVTVHLEACEDVGAALDKIRECGMKAGLSVCPETDASAV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
E + +IDM+L+M+V+PGFGGQ+ I ++ KIR + + ++ + L +VDGG+ N++
Sbjct: 125 ERYLKDIDMLLVMSVHPGFGGQKFIPESLDKIRTIRRMASEQGLGLDIQVDGGIYLSNVR 184
Query: 185 SLVQAGADLLVVGSSFFN 202
++ AGA+++V GS+ FN
Sbjct: 185 EVLDAGANIIVAGSAVFN 202
>gi|167998340|ref|XP_001751876.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696974|gb|EDQ83311.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 243
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE+I + AG IH DVMDG FVPNI+ G V+ ++R +D
Sbjct: 18 IIVSPSILSANFAKLGEQIKAVENAGCDWIHVDVMDGRFVPNITIGPLVVDAIRPVTDLP 77
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP T
Sbjct: 78 LDVHLMIVEPEQRVPDFIKAGADIVSVHCENASTIHLHRTINQIKSLGAKAGVVLNPGTS 137
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D+ILIM+VNPGFGGQ IE+ + KI + L ++ ++ +EVDGGVT
Sbjct: 138 LSQIEYVLDCVDLILIMSVNPGFGGQSFIETQVKKIADLRKLCAEKGVNPWIEVDGGVTP 197
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ LV GS+ F K YA+ ++ +K S
Sbjct: 198 KNAYKVIEAGANALVAGSAVFGAK---DYAEAISGIKAS 233
>gi|239932446|ref|ZP_04689399.1| ribulose-phosphate 3-epimerase [Streptomyces ghanaensis ATCC 14672]
gi|291440811|ref|ZP_06580201.1| ribulose-phosphate 3-epimerase [Streptomyces ghanaensis ATCC 14672]
gi|291343706|gb|EFE70662.1| ribulose-phosphate 3-epimerase [Streptomyces ghanaensis ATCC 14672]
Length = 228
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 132/221 (59%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHVEAATAPVRLAREIRAKGARASMALRPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELINKHGLQLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ AGAD+ V GS+ + + + L ++A A
Sbjct: 180 TIERCADAGADVFVAGSAVYGAEDPAEAVRALRHQAEAATA 220
>gi|239636299|ref|ZP_04677301.1| ribulose-phosphate 3-epimerase [Staphylococcus warneri L37603]
gi|239597654|gb|EEQ80149.1| ribulose-phosphate 3-epimerase [Staphylococcus warneri L37603]
Length = 214
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 132/210 (62%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+++PS+L+ DF L +E+ + +AG +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 3 KVLPSLLSVDFLNLKDELVKLEEAGVDGLHFDVMDGQFVPNISIGIPILDAVRQQSKLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I + AD G D+I+ H E++ HI R++ I GKK GV INP TPV+
Sbjct: 63 DVHLMIENPEQYIELFADHGADLISVHLEATAHIHRAIEQIKNKGKKAGVVINPGTPVSQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +I+ +D +LIMTVNPGFGGQ IE + K+ + L ++ ++ +EVDGG+
Sbjct: 123 ILPIINAVDYVLIMTVNPGFGGQSFIEDCVDKVLELNTLKNEKQLTFDIEVDGGINVETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ V+ GA +LV GS FF Q + ++L
Sbjct: 183 EICVKNGATMLVTGSYFFKQDDYQAVTQKL 212
>gi|312134893|ref|YP_004002231.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor owensensis OL]
gi|311774944|gb|ADQ04431.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor owensensis OL]
Length = 221
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 133/208 (63%), Gaps = 3/208 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL++DF+ L E+ + AGA +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 3 IKIAPSILSSDFADLKSELKKLEVAGADLVHIDVMDGNFVDNITIGAPVVSSLRKNSKLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TP+
Sbjct: 63 FDVHLMVIHPEKHIERFVQSGADNITVHAEATYHLDALISRIKSFGKKASVALNPATPIY 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E+V++ +DM+LIMTVNPG+GGQ+LI T+ KI + K ++ +EVDGG+
Sbjct: 123 MIENVLEIVDMVLIMTVNPGYGGQKLIPYTLKKIERLANFREKEGLTFEIEVDGGINEDT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYA 210
I V+AGAD++V GS F+ G++S A
Sbjct: 183 IVDCVKAGADVIVAGSYVFDS-GDVSKA 209
>gi|310642733|ref|YP_003947491.1| had-superfamily hydrolase, subfamily iib [Paenibacillus polymyxa
SC2]
gi|309247683|gb|ADO57250.1| HAD-superfamily hydrolase, subfamily IIB [Paenibacillus polymyxa
SC2]
Length = 222
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLG E++ + AGA IH DVMDG FV NI+ G +++++R ++
Sbjct: 2 LKIAPSILSADFARLGSEVAEVQAAGADWIHVDVMDGHFVSNITLGPPIVQAIRPHTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG +IIT H E+ H+ + I G GVA+NP T
Sbjct: 62 LDVHLMIEQPERYIGDFVKAGANIITVHAEACVHLHGVIHLIKQQGALAGVALNPGTSPY 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+++V+ +DMIL+MTVNPGFGGQ I T+ KIRQ +A +G+ + +EVDGG+
Sbjct: 122 AIKEVLPNVDMILVMTVNPGFGGQSFIPETLNKIRQIRAWLNELGRPDVHIEVDGGIAEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
++ +AGAD+LV GS+ + +
Sbjct: 182 TAPAVFEAGADVLVAGSAVYGR 203
>gi|254243701|ref|ZP_04937023.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa 2192]
gi|126197079|gb|EAZ61142.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa 2192]
Length = 226
Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 132/207 (63%), Gaps = 6/207 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDII-TFHPES-SPHIRRSLRTIHAMGKKTGVAI 117
S D HLM+S +D I +A + TFHPE+ H + I G + G+
Sbjct: 60 GVSAPIDVHLMVSPVDRIIGDFIEAWRHLTSTFHPEAFQAHRPVPCKLIRDGGCRAGLVF 119
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVD 175
NP TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+D
Sbjct: 120 NPATPLEVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEID 179
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFN 202
GGV +NI+ + AGAD V GS+ FN
Sbjct: 180 GGVNVKNIREIAAAGADTFVAGSAIFN 206
>gi|255535496|ref|YP_003095867.1| Ribulose-phosphate 3-epimerase [Flavobacteriaceae bacterium
3519-10]
gi|255341692|gb|ACU07805.1| Ribulose-phosphate 3-epimerase [Flavobacteriaceae bacterium
3519-10]
Length = 216
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 128/200 (64%), Gaps = 2/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF L +I + ++ A +H DVMDG FVPNISFG V+++++ +S D
Sbjct: 6 IAPSLLSADFGNLQRDIEMLNRSQADWLHIDVMDGRFVPNISFGFPVMKAVQQHSKKFVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ G D+I+ H E+ H+ R++ I G K GV +NP TPV +L
Sbjct: 66 VHLMIVEPEKYVEEFIRMGADLISVHYEACTHLHRTISLIQESGAKAGVVLNPSTPVLML 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
ED+I ++D++L+M+VNPGFGGQ+ I +T KI + K LI + +EVDGGV N
Sbjct: 126 EDIIADVDLVLLMSVNPGFGGQKFINNTYKKIAETKDLILSNNSTALIEVDGGVNLENAG 185
Query: 185 SLVQAGADLLVVGSSFFNQK 204
L +AGAD+LV G++ F+ +
Sbjct: 186 KLFEAGADVLVAGNAVFSSE 205
>gi|302672163|ref|YP_003832123.1| ribulose-phosphate 3-epimerase Rpe [Butyrivibrio proteoclasticus
B316]
gi|302396636|gb|ADL35541.1| ribulose-phosphate 3-epimerase Rpe [Butyrivibrio proteoclasticus
B316]
Length = 219
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADF+ LG++I + +AGA+ IH DVMDG FVP+IS+G VI+S+R + VFD H
Sbjct: 7 PSILSADFNILGQQIREVDEAGAEYIHIDVMDGIFVPSISYGMPVIKSIRKTTQKVFDVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
+MI+ +I A G DIITFH E++ + IH G K G++I P T V L
Sbjct: 67 IMITDPIRYIEEFAKVGADIITFHLEATDDAMAVIDKIHGCGIKAGISIKPGTAVEELLP 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
+D++DMIL+MTV PGFGGQ I +I ++++ + ++ +R ++ +EVDGG+ + N+ ++
Sbjct: 127 YLDKVDMILVMTVEPGFGGQSFIPESIGRVKKVRQMLQERGLTTDIEVDGGIYTENVSNV 186
Query: 187 VQAGADLLVVGSSFFNQKGEIS 208
+ AGA+++V GS F KG +S
Sbjct: 187 LDAGANVIVSGSGVF--KGNVS 206
>gi|312869934|ref|ZP_07730073.1| ribulose-phosphate 3-epimerase [Lactobacillus oris PB013-T2-3]
gi|311094519|gb|EFQ52824.1| ribulose-phosphate 3-epimerase [Lactobacillus oris PB013-T2-3]
Length = 217
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 136/217 (62%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + +AGA+ +H DVMDG FVP+IS+G ++++R ++
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVEQAGAEYLHIDVMDGTFVPSISYGPGFVKAIRPVTNMT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 62 LDVHLMVQSPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ +EVDGGV +
Sbjct: 122 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKQEKGYDFDIEVDGGVNDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K QAGA + V GS FN A+R+ L+ +
Sbjct: 182 VKDCYQAGATVAVAGSYVFNADDP---AERIEALRNA 215
>gi|146281136|ref|YP_001171289.1| ribulose-phosphate 3-epimerase [Pseudomonas stutzeri A1501]
gi|145569341|gb|ABP78447.1| ribulose-phosphate 3-epimerase [Pseudomonas stutzeri A1501]
Length = 203
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 121/184 (65%), Gaps = 3/184 (1%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINII 81
+ N+ AGA +HFDVMD +VPN++ G V +LR + + D HLM+ +D I
Sbjct: 1 MDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPIDVHLMVKPVDRMIGDF 60
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV 141
+AG ITFHPE+S HI RSL+ I G G+ NP TP+ +L+ V+D++DM+L+M+V
Sbjct: 61 LEAGATYITFHPEASEHIDRSLQLIKDGGAMAGLVFNPATPLDVLKYVMDKVDMVLLMSV 120
Query: 142 NPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
NPGFGGQ+ I T+ K+R+A+ALI R I LE+DGGV +NI+ + AGAD V GS+
Sbjct: 121 NPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGGVNPKNIREIAAAGADTFVAGSA 180
Query: 200 FFNQ 203
FNQ
Sbjct: 181 IFNQ 184
>gi|145588337|ref|YP_001154934.1| ribulose-phosphate 3-epimerase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046743|gb|ABP33370.1| ribulose-5-phosphate 3-epimerase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 241
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 143/222 (64%), Gaps = 14/222 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS----- 61
I PSIL+ADF+ LG+E+ ++ AGA IHFDVMD +VPN++ G V ++R Y+
Sbjct: 14 IAPSILSADFACLGKEVQDVLAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPYAMKNGG 73
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLM+ +D + A AG ++I+FHPE+SPH+ R+L I G + G+ +NP T
Sbjct: 74 AAVIDVHLMVEPVDRIVPDFAKAGANLISFHPEASPHVNRTLNLIRDQGCQAGLVLNPAT 133
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ ++ +D++L+M+VNPGFGGQ I ST+ KI Q +A + + R I LEVD
Sbjct: 134 PLDHLDHTLELLDLVLLMSVNPGFGGQSFIPSTLHKIAQVRARLDRHEAETGRQIRLEVD 193
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
GG+ NI + QAGAD V GS+ F G+ +YA+ ++ ++
Sbjct: 194 GGIKVDNIAQVAQAGADTFVAGSAIF---GKENYAQVIDAMR 232
>gi|281419731|ref|ZP_06250730.1| ribulose-phosphate 3-epimerase [Prevotella copri DSM 18205]
gi|281406260|gb|EFB36940.1| ribulose-phosphate 3-epimerase [Prevotella copri DSM 18205]
Length = 217
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+A+F L +I I K+ A +H DVMDG FVPNISFG VI ++ D
Sbjct: 5 VSPSLLSANFIDLKSDIEMINKSEADWLHLDVMDGVFVPNISFGFPVIEAVSKVCTKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI +++I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV +L
Sbjct: 65 VHFMIQHPENYIEQTAKLGAMMMNVHYETCTHLHRTIQQIHAAGMKAGVTLNPSTPVCVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
ED+I ++DM+L+M+VNPGFGGQ+ IE+TI KI + + LI G +++ +EVDGGV +
Sbjct: 125 EDIICDVDMVLLMSVNPGFGGQKFIENTIKKIGRLRQLIKESGSQAL-IEVDGGVQAETA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AG D+LV GS F + L +L
Sbjct: 184 PRLVKAGVDVLVSGSYVFKSTDPYATIHALKEL 216
>gi|325269174|ref|ZP_08135794.1| ribulose-phosphate 3-epimerase [Prevotella multiformis DSM 16608]
gi|324988561|gb|EGC20524.1| ribulose-phosphate 3-epimerase [Prevotella multiformis DSM 16608]
Length = 219
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L +EI I ++ A +H DVMDG FVPNISFG V+ ++ D
Sbjct: 6 VSPSLLSADFLHLDKEIEMINESEADWLHMDVMDGVFVPNISFGFPVLNAVGKVCRKPMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++I ADAG I+ H E+ H+ R+L+ I A G K GV +NP TPV +L
Sbjct: 66 VHLMIVHPENYIQQTADAGAAIMNVHYEACIHLHRTLQAIRAAGMKAGVTLNPSTPVNVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I +ID++ +M+VNPGFGGQ+ IE +I K+++ + LI +EVDGGV +
Sbjct: 126 EDIIGDIDIVQLMSVNPGFGGQKFIEHSIKKVQRLRQLIAHEGSHALIEVDGGVQAETAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV AGAD+LV GS F + L L++
Sbjct: 186 RLVDAGADILVSGSYVFKAGDPKAVIHALKSLQR 219
>gi|168014625|ref|XP_001759852.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688982|gb|EDQ75356.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 243
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F+ LG++I + AG IH DVMDG FVPNI+ G V+ ++R +D
Sbjct: 18 IIVSPSILSANFAILGDQIKAVENAGCDWIHVDVMDGRFVPNITIGPLVVDAIRPVTDLP 77
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 78 LDVHLMIVEPEQRVPDFIKAGADIVSVHCENASTIHLHRTINQIKSLGAKAGVVLNPGTP 137
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D+ILIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGVT
Sbjct: 138 LSQIEYVLDCVDLILIMSVNPGFGGQSFIESQVKKIADLRKMCAEKGVNPWIEVDGGVTP 197
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 198 KNAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKTS 233
>gi|326773325|ref|ZP_08232608.1| ribulose-phosphate 3-epimerase [Actinomyces viscosus C505]
gi|326636555|gb|EGE37458.1| ribulose-phosphate 3-epimerase [Actinomyces viscosus C505]
Length = 226
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 132/216 (61%), Gaps = 3/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNIT-KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL D + L +E+ +T AGA +H DVMD FVPN+S+G V+ ++ ++S
Sbjct: 4 IHPSILNCDIAHLADELDRVTGDAGADGLHVDVMDNHFVPNLSWGLPVVEAVLAHSSLPV 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D A+AGC I+T H E++ R R +H +G G+A+ P TP+
Sbjct: 64 DAHLMIRDADRWAPAYAEAGCQIVTPHAEATTAPVRLARELHRLGAGAGIALRPATPLEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
+ DV+ E D++L+MTV PGFGGQ IES +PKIR+A+ L+G R + L +VDGG+T++ I
Sbjct: 124 VADVLGEFDLLLLMTVEPGFGGQTFIESMLPKIRRARELVGARGLDLRVQVDGGITAQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGAD+ V GS+ + ++ L + S
Sbjct: 184 ERAAEAGADVFVAGSAVYRADDALAAICELREAASS 219
>gi|46908838|ref|YP_015227.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47092281|ref|ZP_00230072.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|226225210|ref|YP_002759317.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes Clip81459]
gi|254852041|ref|ZP_05241389.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|254931072|ref|ZP_05264431.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|300763584|ref|ZP_07073582.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|46882111|gb|AAT05404.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47019260|gb|EAL10002.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|225877672|emb|CAS06386.1| Putative ribulose-phosphate 3-epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605338|gb|EEW17946.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|293582616|gb|EFF94648.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|300515861|gb|EFK42910.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|328469673|gb|EGF40598.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 220]
gi|332313089|gb|EGJ26184.1| Ribulose-phosphate 3-epimerase [Listeria monocytogenes str. Scott
A]
Length = 214
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ ++ + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEHAGADYLHIDVMDGHFVPNLTFGIDMVEQIKKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R + S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDHWRRENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
QAG D+LV GS FF +I+ K L
Sbjct: 184 KCKQAGVDVLVAGSYFFRADDKIACIKEL 212
>gi|258647994|ref|ZP_05735463.1| ribulose-phosphate 3-epimerase [Prevotella tannerae ATCC 51259]
gi|260851836|gb|EEX71705.1| ribulose-phosphate 3-epimerase [Prevotella tannerae ATCC 51259]
Length = 214
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 5/212 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L ++I+ + ++ A H DVMDG FVPNISFG V+ ++ + D
Sbjct: 3 VSPSLLSADFGHLADDIAMLNRSEADWYHLDVMDGVFVPNISFGFPVMEAMAKLATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + +AD G I+ H E+ H+ R+++ I A G GV +NP TPV++L
Sbjct: 63 VHLMIVQPEKFVTQVADLGAKIMNVHYEACTHLHRTVQQIKAAGMMAGVTLNPHTPVSLL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++D++++M+VNPGFGGQ+ IE + K R+ K LI S +E+DGGV K
Sbjct: 123 EDIIGDLDLVMLMSVNPGFGGQKFIEHAVEKTRRLKQLIQANGASTLIEIDGGVNRTTGK 182
Query: 185 SLVQAGADLLVVGSSFFNQKG---EISYAKRL 213
L AGAD+LV GS+ F + EI K L
Sbjct: 183 LLADAGADVLVAGSAVFKAQDPEEEIRVLKHL 214
>gi|15924212|ref|NP_371746.1| ribulose-5-phosphate 3-epimerase-like protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926805|ref|NP_374338.1| hypothetical protein SA1065 [Staphylococcus aureus subsp. aureus
N315]
gi|21282834|ref|NP_645922.1| hypothetical protein MW1105 [Staphylococcus aureus subsp. aureus
MW2]
gi|49483385|ref|YP_040609.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486061|ref|YP_043282.1| putative ribulose-phosphate 3-epimerase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57651790|ref|YP_186096.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
COL]
gi|82750826|ref|YP_416567.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus RF122]
gi|87161501|ref|YP_493812.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194928|ref|YP_499728.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148267713|ref|YP_001246656.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
JH9]
gi|150393771|ref|YP_001316446.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
JH1]
gi|151221344|ref|YP_001332166.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979543|ref|YP_001441802.1| ribulose-5-phosphate 3-epimerase-like protein [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509394|ref|YP_001575053.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142012|ref|ZP_03566505.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253315580|ref|ZP_04838793.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253731839|ref|ZP_04866004.1| ribulose-5-phosphate 3-epimerase family protein [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253733540|ref|ZP_04867705.1| ribulose-5-phosphate 3-epimerase family protein [Staphylococcus
aureus subsp. aureus TCH130]
gi|255006009|ref|ZP_05144610.2| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425275|ref|ZP_05601700.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427935|ref|ZP_05604333.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430568|ref|ZP_05606950.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433329|ref|ZP_05609687.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436171|ref|ZP_05612218.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M876]
gi|257795722|ref|ZP_05644701.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9781]
gi|258415946|ref|ZP_05682216.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9763]
gi|258419693|ref|ZP_05682660.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9719]
gi|258423735|ref|ZP_05686621.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9635]
gi|258438735|ref|ZP_05689888.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9299]
gi|258444559|ref|ZP_05692888.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8115]
gi|258447608|ref|ZP_05695752.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A6300]
gi|258449450|ref|ZP_05697553.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A6224]
gi|258452519|ref|ZP_05700525.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A5948]
gi|258454829|ref|ZP_05702793.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A5937]
gi|262048120|ref|ZP_06021007.1| hypothetical protein SAD30_1896 [Staphylococcus aureus D30]
gi|262051853|ref|ZP_06024069.1| hypothetical protein SA930_1403 [Staphylococcus aureus 930918-3]
gi|269202837|ref|YP_003282106.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ED98]
gi|282892708|ref|ZP_06300943.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8117]
gi|282903775|ref|ZP_06311663.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C160]
gi|282905539|ref|ZP_06313394.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908515|ref|ZP_06316345.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910794|ref|ZP_06318597.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913997|ref|ZP_06321784.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M899]
gi|282916471|ref|ZP_06324233.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
D139]
gi|282918919|ref|ZP_06326654.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C427]
gi|282920004|ref|ZP_06327733.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9765]
gi|282924042|ref|ZP_06331718.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C101]
gi|282927562|ref|ZP_06335178.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A10102]
gi|283770283|ref|ZP_06343175.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
H19]
gi|283957963|ref|ZP_06375414.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284024146|ref|ZP_06378544.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
132]
gi|293501030|ref|ZP_06666881.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509989|ref|ZP_06668697.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M809]
gi|293526577|ref|ZP_06671262.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M1015]
gi|294848215|ref|ZP_06788962.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9754]
gi|295407160|ref|ZP_06816961.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8819]
gi|295427707|ref|ZP_06820339.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275243|ref|ZP_06857750.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MR1]
gi|297208134|ref|ZP_06924565.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245954|ref|ZP_06929813.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8796]
gi|297591334|ref|ZP_06949972.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MN8]
gi|300912214|ref|ZP_07129657.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381215|ref|ZP_07363868.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|13701022|dbj|BAB42317.1| cfxE [Staphylococcus aureus subsp. aureus N315]
gi|14246992|dbj|BAB57384.1| ribulose-5-phosphate 3-epimerase homolog [Staphylococcus aureus
subsp. aureus Mu50]
gi|21204273|dbj|BAB94970.1| cfxE [Staphylococcus aureus subsp. aureus MW2]
gi|49241514|emb|CAG40200.1| putative ribulose-phosphate 3-epimerase [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49244504|emb|CAG42933.1| putative ribulose-phosphate 3-epimerase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57285976|gb|AAW38070.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
COL]
gi|82656357|emb|CAI80775.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus RF122]
gi|87127475|gb|ABD21989.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202486|gb|ABD30296.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740782|gb|ABQ49080.1| ribulose-5-phosphate 3-epimerase [Staphylococcus aureus subsp.
aureus JH9]
gi|149946223|gb|ABR52159.1| Ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
JH1]
gi|150374144|dbj|BAF67404.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721678|dbj|BAF78095.1| ribulose-5-phosphate 3-epimerase homolog [Staphylococcus aureus
subsp. aureus Mu3]
gi|160368203|gb|ABX29174.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724438|gb|EES93167.1| ribulose-5-phosphate 3-epimerase family protein [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253728594|gb|EES97323.1| ribulose-5-phosphate 3-epimerase family protein [Staphylococcus
aureus subsp. aureus TCH130]
gi|257271732|gb|EEV03870.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274776|gb|EEV06263.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278696|gb|EEV09315.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281422|gb|EEV11559.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284453|gb|EEV14573.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M876]
gi|257789694|gb|EEV28034.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9781]
gi|257839282|gb|EEV63756.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9763]
gi|257844278|gb|EEV68660.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9719]
gi|257845967|gb|EEV69995.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9635]
gi|257847994|gb|EEV71987.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9299]
gi|257850052|gb|EEV74005.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8115]
gi|257853799|gb|EEV76758.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A6300]
gi|257857438|gb|EEV80336.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A6224]
gi|257859737|gb|EEV82579.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A5948]
gi|257863212|gb|EEV85976.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A5937]
gi|259160254|gb|EEW45282.1| hypothetical protein SA930_1403 [Staphylococcus aureus 930918-3]
gi|259163686|gb|EEW48241.1| hypothetical protein SAD30_1896 [Staphylococcus aureus D30]
gi|262075127|gb|ACY11100.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ED98]
gi|269940714|emb|CBI49095.1| putative ribulose-phosphate 3-epimerase [Staphylococcus aureus
subsp. aureus TW20]
gi|282314014|gb|EFB44406.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C101]
gi|282316729|gb|EFB47103.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C427]
gi|282319911|gb|EFB50259.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
D139]
gi|282322065|gb|EFB52389.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M899]
gi|282325399|gb|EFB55708.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327577|gb|EFB57860.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330831|gb|EFB60345.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590565|gb|EFB95642.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A10102]
gi|282594720|gb|EFB99704.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9765]
gi|282595393|gb|EFC00357.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C160]
gi|282764705|gb|EFC04830.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8117]
gi|283460430|gb|EFC07520.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
H19]
gi|283470434|emb|CAQ49645.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ST398]
gi|283790112|gb|EFC28929.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816904|gb|ADC37391.1| Ribulose-phosphate 3-epimerase [Staphylococcus aureus 04-02981]
gi|290920649|gb|EFD97712.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M1015]
gi|291096035|gb|EFE26296.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466933|gb|EFF09451.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M809]
gi|294825015|gb|EFG41437.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9754]
gi|294968013|gb|EFG44041.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8819]
gi|295128065|gb|EFG57699.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887377|gb|EFH26279.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177118|gb|EFH36372.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8796]
gi|297576220|gb|EFH94936.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MN8]
gi|298694515|gb|ADI97737.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ED133]
gi|300886460|gb|EFK81662.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332826|gb|ADL23019.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302751045|gb|ADL65222.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340198|gb|EFM06139.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312438401|gb|ADQ77472.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
TCH60]
gi|312829616|emb|CBX34458.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315131013|gb|EFT86997.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194108|gb|EFU24501.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198459|gb|EFU28788.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320144322|gb|EFW36088.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323442313|gb|EGA99943.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus O46]
gi|329313891|gb|AEB88304.1| Ribulose-5-phosphate 3-epimerase [Staphylococcus aureus subsp.
aureus T0131]
gi|329724747|gb|EGG61252.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
21189]
gi|329727702|gb|EGG64158.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
21172]
gi|329728817|gb|EGG65238.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
21193]
Length = 214
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 134/214 (62%), Gaps = 5/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ DF L E+ + +AG +HFDVMDG FVPNIS G ++ ++R +
Sbjct: 3 KLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I A+ G D+I+ H ES+PHI R+++ I + KK GV INP TP++
Sbjct: 63 DVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+E ++D +D +L+MTVNPGFGGQ I+ + KI A+ +R ++ +EVDGGV +
Sbjct: 123 IEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTDTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K V+ GA +LV GS FF Q+ Y K LK
Sbjct: 183 KVCVENGATMLVTGSFFFKQE---DYKKVTQALK 213
>gi|83815955|ref|YP_444165.1| ribulose-phosphate 3-epimerase [Salinibacter ruber DSM 13855]
gi|294505823|ref|YP_003569881.1| Ribulose-phosphate-3-epimerase [Salinibacter ruber M8]
gi|83757349|gb|ABC45462.1| ribulose-phosphate 3-epimerase [Salinibacter ruber DSM 13855]
gi|294342151|emb|CBH22929.1| Ribulose-phosphate-3-epimerase [Salinibacter ruber M8]
Length = 244
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 133/220 (60%), Gaps = 11/220 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD---S 63
+ PSI+A+D R + AG +H DVMDG FVPNI+ G DV+R+LR +D +
Sbjct: 24 LAPSIIASDSGRFAACADEVLGAGPDWLHVDVMDGHFVPNITIGPDVVRTLRPVADEHDA 83
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +++ ADAG D++T H E+ PH+ R +TI A G + GVA+NP TP+
Sbjct: 84 QLDVHLMIEEPQQYVDTFADAGADMLTVHVEACPHLHRVAQTIRAAGCEVGVALNPATPL 143
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI----RQAKALIGKRSISLEVDGGVT 179
LE ++ +D++L+M+VNPGF GQ I + K+ RQ AL S +EVDGGVT
Sbjct: 144 GHLEGILPFVDLVLVMSVNPGFSGQSFIPESTAKVQRVRRQLNAL--GSSAYVEVDGGVT 201
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N LV+AGAD+LV GS+ F GE S + + L+ +
Sbjct: 202 PNNAMELVRAGADVLVSGSAVFG--GEQSVPQNVEALRNA 239
>gi|282859690|ref|ZP_06268791.1| ribulose-phosphate 3-epimerase [Prevotella bivia JCVIHMP010]
gi|282587501|gb|EFB92705.1| ribulose-phosphate 3-epimerase [Prevotella bivia JCVIHMP010]
Length = 216
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PS+L+ADF L ++I I + A +H DVMDG FVPNISFG V++++
Sbjct: 2 SVIVSPSLLSADFLHLDKDIEMINNSDADWLHMDVMDGSFVPNISFGFPVMKAVGKALKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I AD G I+ H E+ H+ R+L+ I A G K GV +NP TPV
Sbjct: 62 PMDVHLMIECPEKYIQQTADCGAAIMNVHYEACVHLHRTLQAIKAAGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LED+I +ID++ +M+VNPGFGGQ I + K+++ KALI K + +EVDGGV
Sbjct: 122 NVLEDIIGDIDIVQLMSVNPGFGGQSFITHAVKKVQKLKALIEKEQCNTLIEVDGGVNGE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
LV AG D+LV GS F K
Sbjct: 182 TAPLLVNAGTDILVSGSYIFGSK 204
>gi|257871112|ref|ZP_05650765.1| ribulose-phosphate 3-epimerase [Enterococcus gallinarum EG2]
gi|257805276|gb|EEV34098.1| ribulose-phosphate 3-epimerase [Enterococcus gallinarum EG2]
Length = 217
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 133/214 (62%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G +V++++R +
Sbjct: 2 IKLAPSILSADFANLQRDIELVEKNGADYIHIDVMDGQFVPNITLGPNVVKAIRPITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +++I+ A+AG DII H E++PHI R+++ I K + INP TPVA
Sbjct: 62 LDVHLMITQPENYIHAFAEAGADIIGVHAEATPHIHRAIQMILNENVKAEIVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+ D +L+MTVNPGFGGQ IE T+ KI++ L K +EVDGG+ +
Sbjct: 122 AIQHVLSMCDQVLVMTVNPGFGGQSFIEETVAKIKELAQLKEKNGYHYDIEVDGGIVPKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++AGA++ V GS ++ K L ++
Sbjct: 182 ARICLEAGANVFVAGSYIYDADSPTDQIKALKEV 215
>gi|149195070|ref|ZP_01872162.1| ribulose-phosphate 3-epimerase [Caminibacter mediatlanticus TB-2]
gi|149134783|gb|EDM23267.1| ribulose-phosphate 3-epimerase [Caminibacter mediatlanticus TB-2]
Length = 212
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 134/215 (62%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF +L EE+ + +AGA IH DVMDG FVPN++ G ++ ++ S
Sbjct: 1 MKIAPSILSADFGKLAEEVKAVCEAGADFIHVDVMDGHFVPNMTMGPMIVEAVSKASTKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+ +I +++ A + ITFH E H+ + ++ I + GV +NP TPV
Sbjct: 61 LDIHFMVENIPFFVDMYAHIKPEFITFHIEEEKHVNKVIQQIRNYDIRPGVVLNPATPVC 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+LE ++ ++DM+L+M+VNPGFGGQ+ I S I KI++ + L K++ +L EVDGGV +N
Sbjct: 121 LLEYIVADVDMVLLMSVNPGFGGQKFIPSVIDKIKELRELAEKKNPNLLIEVDGGVNDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K L +AGAD+LV GS F Y K + L+
Sbjct: 181 AKLLKEAGADILVAGSFVFKSN---DYKKAIESLR 212
>gi|163782821|ref|ZP_02177817.1| ribulose-5-phosphate 3-epimerase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881942|gb|EDP75450.1| ribulose-5-phosphate 3-epimerase [Hydrogenivirga sp. 128-5-R1-1]
Length = 223
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 137/219 (62%), Gaps = 2/219 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILA D+ +GE+I + GA IHFDVMDG FVPNI+ G +++ S+ + D
Sbjct: 5 LAPSILAGDWWNIGEQIEATLRGGADIIHFDVMDGHFVPNITVGPEILTSISRRVNVPVD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I +AG I+ H E+ PHI R+L I +G K GV +NP TP++ +
Sbjct: 65 AHLMIENPDRYIPSFVEAGAKWISVHIENVPHIHRTLTLIRELGAKAGVVLNPGTPLSAV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+ I D +L+M+VNPGF GQ+ IE ++ ++ + + + + +EVDGGV N+
Sbjct: 125 EEAIHYADYVLLMSVNPGFSGQRFIERSLERLSLLRDMRDRLNPDCLIEVDGGVKEDNVV 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+V+AGAD++VVGS F+ K + ++L DL SA+A+
Sbjct: 185 EVVRAGADVVVVGSGIFSAKDVEAQTRKLKDLISSAVAV 223
>gi|323700858|ref|ZP_08112770.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. ND132]
gi|323460790|gb|EGB16655.1| ribulose-phosphate 3-epimerase [Desulfovibrio desulfuricans ND132]
Length = 216
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L++DF+ + E+ + AG +H DVMDG FVPNI+FG +I+++R+ S FDCH
Sbjct: 5 PSMLSSDFANMETELKALEAAGLSWVHLDVMDGMFVPNITFGPPIIKAMRAKSKLFFDCH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI+ +I ADAG D+I H E+ H+ R I G K VA+NP TP +
Sbjct: 65 LMINDPGRYIGDFADAGADLICVHAEACTHLERVCAQIVEAGAKPAVALNPHTPPEAIRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
++ ++ M+LIM+VNPGFGGQ+ I + K+R KA+I + +++DGGVT N + L
Sbjct: 125 LLPQLYMVLIMSVNPGFGGQKFIPFCLDKVRDLKAMIDRAGADTLIQIDGGVTLDNAREL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+AG D+LV GS+FF K D K
Sbjct: 185 TEAGVDVLVSGSAFFKHPPYGERHKAFQDACK 216
>gi|254824980|ref|ZP_05229981.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|254992928|ref|ZP_05275118.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-064]
gi|255522122|ref|ZP_05389359.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-175]
gi|293594219|gb|EFG01980.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
Length = 214
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ ++ + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIKKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R + S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDHWRRENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
QAG D+LV GS FF +I+ K L
Sbjct: 184 KCKQAGVDVLVAGSYFFRADDKIACIKEL 212
>gi|116622297|ref|YP_824453.1| ribulose-5-phosphate 3-epimerase [Candidatus Solibacter usitatus
Ellin6076]
gi|116225459|gb|ABJ84168.1| ribulose-5-phosphate 3-epimerase [Candidatus Solibacter usitatus
Ellin6076]
Length = 224
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 138/221 (62%), Gaps = 2/221 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+IVPSIL+ADF+RL +EI+ + + GA+ +H DVMDG FV N++ G V+ S+R +
Sbjct: 2 IEIVPSILSADFARLADEIARVERGGARMLHLDVMDGHFVDNLTIGPPVVESVRKNTSLH 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + ++ A AG + I+ H E+ H+ L I G GV +NP TPV
Sbjct: 62 LDVHLMIENPERYVESFARAGANSISVHYEAVRHLDGVLGLIRKAGAMAGVVLNPATPVG 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+LEDV+ D +L+M+VNPGFGGQ+LI + K+R+ ++ ++ ++L E+DGGV N
Sbjct: 122 VLEDVLGMADYVLLMSVNPGFGGQKLIPYVLDKVRKLDSMRREKKLALLIEIDGGVHKEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ +V+AG D +V GS+ F+ + + + ++ A A+
Sbjct: 182 LAEVVRAGCDWIVTGSAIFHSPDPEATMREMREIAAHATAV 222
>gi|225457361|ref|XP_002284772.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 282
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 138/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G ++ +LR +D
Sbjct: 59 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVGALRPVTDLP 118
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 119 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPATP 178
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGV
Sbjct: 179 LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRICAEKGVNPWIEVDGGVGP 238
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 239 ANAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKTS 274
>gi|33520013|ref|NP_878845.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia floridanus]
gi|33504359|emb|CAD83252.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia floridanus]
Length = 226
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 134/200 (67%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSILAADFS+LGE++SN+ AGA +HFDVMD +VPN+S G V++SLR+Y D
Sbjct: 10 IEPSILAADFSKLGEDVSNVISAGADVLHFDVMDNHYVPNLSIGPMVLKSLRNYGIDIPI 69
Query: 66 DCHLMISSIDSHINI-IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLMI I+ + + +AG I+FHPES+ H+ R L+ I G KTG+ +NP T ++
Sbjct: 70 NVHLMIKPINDRLILDFLEAGATGISFHPESTDHVDRFLQLIKEHGCKTGLVLNPSTDLS 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
LE V+ +ID+I++M+VNPGFGGQ + + KI Q + LI I+L VDGG+ N
Sbjct: 130 CLEYVMHKIDVIILMSVNPGFGGQIFLPEILRKITQTRKLIDNNPYDINLAVDGGINMSN 189
Query: 183 IKSLVQAGADLLVVGSSFFN 202
+ ++GA++ ++GS+ FN
Sbjct: 190 FCKICESGANVFIIGSAIFN 209
>gi|153807347|ref|ZP_01960015.1| hypothetical protein BACCAC_01625 [Bacteroides caccae ATCC 43185]
gi|149129709|gb|EDM20921.1| hypothetical protein BACCAC_01625 [Bacteroides caccae ATCC 43185]
Length = 216
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVVQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVRELRALIEQTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + RL++L
Sbjct: 184 ARLVEAGADALVAGNAVFGAPDPEAMIHRLHEL 216
>gi|298373305|ref|ZP_06983294.1| ribulose-phosphate 3-epimerase [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274357|gb|EFI15909.1| ribulose-phosphate 3-epimerase [Bacteroidetes oral taxon 274 str.
F0058]
Length = 218
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 127/204 (62%), Gaps = 3/204 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L +I + ++ A +H D+MDG FVPNISFG V+ + S D
Sbjct: 7 LAPSLLSADFGNLARDIEIVNRSSADWLHIDIMDGVFVPNISFGFPVLEYVNKLSQKPLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I G ++ H E SPH+ RS+ I G K GV +NP TPV +L
Sbjct: 67 VHLMIVEPTKFIEECKRVGAMMMNIHYEVSPHLHRSVTAIRNAGMKAGVTLNPHTPVELL 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED++ ++D++L+M+VNPGFGGQ+ IE+T KI + +++I +R +EVDGGV N
Sbjct: 127 EDIVADVDLVLLMSVNPGFGGQKFIENTYSKIARLRSMIERRGSKALIEVDGGVNLDNAA 186
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
L QAGAD+LV G++ F + G+I+
Sbjct: 187 RLYQAGADVLVAGNAVF-RSGDIA 209
>gi|197302401|ref|ZP_03167457.1| hypothetical protein RUMLAC_01129 [Ruminococcus lactaris ATCC
29176]
gi|197298522|gb|EDY33066.1| hypothetical protein RUMLAC_01129 [Ruminococcus lactaris ATCC
29176]
Length = 220
Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LGE++ AGA+ IHFDVMDG FVP+ISFG V+ ++ Y+ + D
Sbjct: 5 LAPSILSADFKVLGEQLKVTEAAGAEYIHFDVMDGIFVPSISFGMPVLSCIKGYTSQILD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ ++ A AG DIIT H E+ ++ ++ IHA G K G++I P+TPV
Sbjct: 65 AHLMITEPIRYVEEFAKAGADIITVHLEACEDLQATIDKIHAAGVKAGISIKPKTPVEAF 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D+ DM L+M+V PGFGGQ I ++ +IR+ + ++ ++ + +EVDGG+ N+
Sbjct: 125 VPYLDQADMFLVMSVEPGFGGQAFIPESLDRIRELRKMLDEKGLKTDIEVDGGIYHANVA 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEI 207
++ AGA+++V GS F KG+I
Sbjct: 185 EVLDAGANIMVSGSGIF--KGDI 205
>gi|294673008|ref|YP_003573624.1| ribulose-phosphate 3-epimerase [Prevotella ruminicola 23]
gi|294472970|gb|ADE82359.1| ribulose-phosphate 3-epimerase [Prevotella ruminicola 23]
Length = 215
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 127/197 (64%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L +I I ++ A +H DVMDG FVPNISFG V+ ++ D
Sbjct: 4 VSPSLLAADFLHLDRDIDMINRSEADWLHLDVMDGSFVPNISFGFPVLEAVAKACKKPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IH G K GV +NP TP+++L
Sbjct: 64 VHYMIEHPERYIAQTAKLGAMMMNVHYEACVHLHRTIQEIHQAGMKAGVTLNPATPISVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I+++DM+L+M+VNPGFGGQ+ IE+TI K+++ + LI ++ +EVDGGV +
Sbjct: 124 EDIINDVDMVLLMSVNPGFGGQKFIENTIDKVKRLRQLITEKGSHALIEVDGGVQGQTAP 183
Query: 185 SLVQAGADLLVVGSSFF 201
LV+AG D+LV GS F
Sbjct: 184 RLVEAGVDVLVSGSYVF 200
>gi|320011944|gb|ADW06794.1| ribulose-phosphate 3-epimerase [Streptomyces flavogriseus ATCC
33331]
Length = 227
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 3 QINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPIVEALSKATDTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEDADRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++ I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSATTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ +AGAD+ V GS+ + +
Sbjct: 181 ERCAEAGADVFVAGSAVYGAE 201
>gi|160883234|ref|ZP_02064237.1| hypothetical protein BACOVA_01203 [Bacteroides ovatus ATCC 8483]
gi|156111459|gb|EDO13204.1| hypothetical protein BACOVA_01203 [Bacteroides ovatus ATCC 8483]
Length = 216
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 135/213 (63%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSQKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + ++L++L
Sbjct: 184 ARLVEAGADALVAGNAVFAAPDPEAMIRQLHEL 216
>gi|291541740|emb|CBL14850.1| ribulose-5-phosphate 3-epimerase [Ruminococcus bromii L2-63]
Length = 215
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ DFS++GEEI + AGA +H DVMDG FVPNI+FGA VI+++R +S+
Sbjct: 1 MKIAPSLLSCDFSKMGEEIERMDLAGADWMHLDVMDGHFVPNITFGAPVIKAVRKFSNRP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS +I+ ADAG DIITFH E I ++ I + G K G+ + P TP
Sbjct: 61 FDVHLMISDPLKYIDDFADAGADIITFHVECDSDIDDTIAKIKSRGIKPGLVLKPNTPAW 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+ ++++D++L+MTV PGFGGQ + +PK+++ K +R ++ +E DGG+
Sbjct: 121 TVFPYLEKLDLVLVMTVEPGFGGQSFMPEMMPKVKEIKRECQRRGLNNILIEADGGIGRD 180
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ +AG D+ V G++ F
Sbjct: 181 TIEQASEAGVDVCVAGTAVFR 201
>gi|237755421|ref|ZP_04584047.1| ribulose-phosphate 3-epimerase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692421|gb|EEP61403.1| ribulose-phosphate 3-epimerase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 221
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 137/219 (62%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFS LG++I + +AGA IH D+MDG +VPNI+FG V+ S+R +D FD
Sbjct: 4 LAPSILSADFSILGQQIKEVEEAGADIIHLDIMDGRYVPNITFGPPVVESIRKITDLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I AG ++I+FH +++ H R + I + K GV +NP TPV L
Sbjct: 64 AHLMIVEPEKYITDFIKAGVNMISFHMDATIHAHRVVDMIKSNDVKAGVVLNPATPVKTL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRNI 183
E++I ID +LIM+VNPGFGGQ+ I T K+++ K L+ K + I +E+DGGV NI
Sbjct: 124 EEIIHYIDYVLIMSVNPGFGGQKFIPQTAEKVKKLKLLMEKANRTDILIEIDGGVNQDNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
L G ++ V G++ F KG I + + +LK+ L
Sbjct: 184 NYLSMLGVNIFVAGNAVF--KGNIK--ENVVNLKRGMLG 218
>gi|239939910|ref|ZP_04691847.1| ribulose-phosphate 3-epimerase [Streptomyces roseosporus NRRL
15998]
gi|239986396|ref|ZP_04707060.1| ribulose-phosphate 3-epimerase [Streptomyces roseosporus NRRL
11379]
gi|291443342|ref|ZP_06582732.1| ribulose-phosphate 3-epimerase [Streptomyces roseosporus NRRL
15998]
gi|291346289|gb|EFE73193.1| ribulose-phosphate 3-epimerase [Streptomyces roseosporus NRRL
15998]
Length = 227
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 7/214 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 3 QINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPIVEALSKATDTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEDADRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++ I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSATTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +AGAD+ V GS+ + G A + DL+
Sbjct: 181 ERCAEAGADVFVAGSAVY---GAADPAAAVRDLR 211
>gi|258645361|ref|ZP_05732830.1| ribulose-phosphate 3-epimerase [Dialister invisus DSM 15470]
gi|260402710|gb|EEW96257.1| ribulose-phosphate 3-epimerase [Dialister invisus DSM 15470]
Length = 213
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 129/199 (64%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+LAADFS L E+ +I GA +H DVMDG FVPNISFG VI+SLR +
Sbjct: 1 MKIAPSVLAADFSNLECELKDIETGGADLVHLDVMDGTFVPNISFGPPVIQSLRKVTLLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM + + + + G D+I+FH E+ H+ R++ I + G K G+A+NP T ++
Sbjct: 61 FDVHLMTYHPEYYFDSLGKIGVDMISFHQEAVIHVDRTIHDIKSRGIKAGIALNPGTSLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
LE V+ +D +LIM+VNPGFGGQ+ I T+ KI+ K ++ + I +EVDGGV+S N
Sbjct: 121 ALELVLPLLDFVLIMSVNPGFGGQKFISYTLDKIKVLKKMMKNLNLQIPIEVDGGVSSAN 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
L GAD+LV GSS F
Sbjct: 181 AVLLKDVGADILVAGSSVF 199
>gi|320140963|gb|EFW32810.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 214
Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 134/214 (62%), Gaps = 5/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ DF L E+ + +AG +HFDVMDG FVPNIS G ++ ++R +
Sbjct: 3 KLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I A+ G D+I+ H ES+PHI R+++ I + KK GV INP TP++
Sbjct: 63 DVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+E ++D +D +L+MTVNPGFGGQ I+ + KI A+ +R ++ +EVDGGV +
Sbjct: 123 IEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIVGLNAIKMERQLNFDIEVDGGVNTDTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K V+ GA +LV GS FF Q+ Y K LK
Sbjct: 183 KVCVENGATMLVTGSFFFKQE---DYKKVTQALK 213
>gi|299821755|ref|ZP_07053643.1| ribulose-phosphate 3-epimerase [Listeria grayi DSM 20601]
gi|299817420|gb|EFI84656.1| ribulose-phosphate 3-epimerase [Listeria grayi DSM 20601]
Length = 218
Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 125/201 (62%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L ++I + + GA +H DVMDG FVPNI+FG ++ ++R +
Sbjct: 3 KIAPSILSADFANLAKDIKEVEELGADYLHVDVMDGHFVPNITFGPLMVEAIRPITKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D++I A AG D I+ H E++ H+ RSL+ I + K +NP TP+
Sbjct: 63 DVHLMIEDPDAYIPAFAKAGADFISVHVEATRHLHRSLQLIRSYDVKAAAVLNPATPIDT 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+ E+DM+L MTVNPGFGGQ I + KI+ K LI ++ I +EVDGGV +
Sbjct: 123 LQHVLHELDMVLFMTVNPGFGGQVFIPEVLEKIKAFKQLITEKGLDIKIEVDGGVNEKTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ +AGAD+ V GS + K
Sbjct: 183 RLCKEAGADIFVAGSYVYGSK 203
>gi|189461479|ref|ZP_03010264.1| hypothetical protein BACCOP_02138 [Bacteroides coprocola DSM 17136]
gi|189431813|gb|EDV00798.1| hypothetical protein BACCOP_02138 [Bacteroides coprocola DSM 17136]
Length = 219
Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 137/220 (62%), Gaps = 4/220 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++I PS+L+A+F+ L E+I I + A +H D+MDG FVPNIS G V++ +
Sbjct: 1 MKNELKISPSLLSANFANLKEDIEKINHSDADWLHIDIMDGVFVPNISVGFPVLKYVAEL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+ D HLMI + I + + G ++ H E+ H+ R ++ I G + GV +NP
Sbjct: 61 SEKPLDVHLMIVQPEKFIREVKELGTMMMNVHYEACTHLHRVVQQIKDAGMRAGVTLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGG 177
TPV++L D+I ++DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI G +++ +EVDGG
Sbjct: 121 TPVSMLTDIISDVDMVLLMSVNPGFGGQKFIPHTLTKVRELRELIDRSGSQAL-IEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V LV+AGAD+LV G++ F + +RL +LK
Sbjct: 180 VNLETGSQLVEAGADVLVAGNAVFKAPDMVDIIRRLKELK 219
>gi|239978380|ref|ZP_04700904.1| ribulose-phosphate 3-epimerase [Streptomyces albus J1074]
gi|291450275|ref|ZP_06589665.1| ribulose-phosphate 3-epimerase [Streptomyces albus J1074]
gi|291353224|gb|EFE80126.1| ribulose-phosphate 3-epimerase [Streptomyces albus J1074]
Length = 228
Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 132/221 (59%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +++
Sbjct: 2 AAQINPSILSADFARLADEARAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATET 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P T +
Sbjct: 60 PLDCHLMIEDPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARAAMALKPATAI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
E+++ E+DM+LIMTV PGFGGQ ++ T+PKIR+ + LIG+ + L+VDGGV++
Sbjct: 120 EPYEELLPELDMVLIMTVEPGFGGQSFLDLTLPKIRRTRELIGRHGLDLWLQVDGGVSAA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + + L D + A A
Sbjct: 180 TIERCAEAGADVFVAGSAVYGAEDPAEAVRSLRDSARKATA 220
>gi|163790818|ref|ZP_02185243.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. AT7]
gi|159873886|gb|EDP67965.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. AT7]
Length = 216
Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 133/216 (61%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FGAD + ++R +
Sbjct: 1 MKLAPSILSADFANLARDIRLVEDGGADYIHVDVMDGHFVPNITFGADTVAAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+ ++H+ A AG DIIT H ES+PHI R L+ I G K G+A+NP TP+
Sbjct: 61 LDCHLMVEYPENHVKNFAKAGADIITIHAESTPHIHRVLQLIKDQGVKAGIAVNPGTPIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
L V+ +D++L+MTVNPG+GGQ I T+ KI+ AK L + + +EVDGG+ +
Sbjct: 121 SLIHVLGLVDLVLVMTVNPGYGGQSFILETLKKIQAAKELKDREGYTYEIEVDGGIAEQT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K +AGA + V GS +N + + L D K
Sbjct: 181 AKQCKEAGASVFVAGSYIYNAEDPTNQMAILRDAVK 216
>gi|259503539|ref|ZP_05746441.1| ribulose-phosphate 3-epimerase [Lactobacillus antri DSM 16041]
gi|259168617|gb|EEW53112.1| ribulose-phosphate 3-epimerase [Lactobacillus antri DSM 16041]
Length = 222
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 129/200 (64%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + +AGA+ +H DVMDG FVP+IS+G ++++R ++
Sbjct: 7 IKVAPSILSADYVNLQKDIEKVDQAGAEYLHIDVMDGTFVPSISYGPGFVKAIRPVTNMT 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 67 LDVHLMVQSPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ +EVDGGV +
Sbjct: 127 LIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKREKGYDFDIEVDGGVNDQT 186
Query: 183 IKSLVQAGADLLVVGSSFFN 202
+K QAGA + V GS FN
Sbjct: 187 VKDCYQAGATVAVAGSYVFN 206
>gi|84619192|emb|CAJ42316.1| putative ribulose-phosphate 3-epimerase [Streptomyces
steffisburgensis]
Length = 228
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ AGAD+ V GS+ + G A+ + L+ A AI
Sbjct: 180 TIERCADAGADVFVAGSAVY---GANDPAEAVRALRTQAEAI 218
>gi|116515269|ref|YP_802898.1| hypothetical protein BCc_351 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116257123|gb|ABJ90805.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 220
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I+PSIL+ADF LG E+ + +AG + IHFD+MD +VPN + G +++S+++ + VF
Sbjct: 6 IIPSILSADFCYLGNELHKLLRAGCQLIHFDLMDNHYVPNFTIGPMILKSVKNNNIPVFF 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D LM SS DS I + AD IT HPE++ + R++ I +G G+A+NP T +
Sbjct: 66 DVPLMASSGDSLIPLFADLNVKFITIHPETTNPLPRTIPLIKKIGCNVGLALNPSTSLNC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ +I E+D+IL+M VNPGFGGQ +++T KI+ + LI K+ +I L VDGGV NI
Sbjct: 126 LDYIIKELDLILVMAVNPGFGGQVFLKNTFKKIKPIRYLINKKKSNILLSVDGGVNQSNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ +GAD LV+GS+ FN K + K ++
Sbjct: 186 LKIIDSGADYLVIGSAIFNFKNYLKTIKNFQNI 218
>gi|218961872|ref|YP_001741647.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Cloacamonas
acidaminovorans]
gi|167730529|emb|CAO81441.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Cloacamonas
acidaminovorans]
Length = 217
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/199 (44%), Positives = 127/199 (63%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PS+LAADF L EI+++ AGA +H D+MDG +VPN+SFG VIR++R S
Sbjct: 5 QIAPSLLAADFGNLDSEITSLEAAGADILHLDIMDGHYVPNLSFGFPVIRTIRFLSKLPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+++ D HI+++ D ++FH E+ H R ++T+ G K G+A+NP TP+
Sbjct: 65 DVHLMVTNPDFHISLLLDMDVQWVSFHQETFYHSHRLIQTLKEKGIKAGLALNPGTPIGT 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE ++ ++D IL+M+VNPGF Q I S I KI L K + +EVDGGVT+ N
Sbjct: 125 LEALLPDLDYILVMSVNPGFSAQDFIPSAIYKIWDLYNLRKKNNYRYLIEVDGGVTAANA 184
Query: 184 KSLVQAGADLLVVGSSFFN 202
K+L +AG D+LV S F+
Sbjct: 185 KALKEAGTDILVSASYIFS 203
>gi|262384556|ref|ZP_06077690.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_33B]
gi|262293849|gb|EEY81783.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_33B]
Length = 216
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+ D
Sbjct: 5 IAPSLLSANFLDLRKEVEMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD+LV G+ F I K L L
Sbjct: 185 RLVDAGADVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|282866193|ref|ZP_06275240.1| ribulose-phosphate 3-epimerase [Streptomyces sp. ACTE]
gi|282558977|gb|EFB64532.1| ribulose-phosphate 3-epimerase [Streptomyces sp. ACTE]
Length = 227
Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G V+ +L +D+
Sbjct: 3 QINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVEALSKATDTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 61 DCHLMIEDADRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPVEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++ I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSASTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ +AGAD+ V GS+ + +
Sbjct: 181 ERCAEAGADVFVAGSAVYGAQ 201
>gi|156742033|ref|YP_001432162.1| ribulose-phosphate 3-epimerase [Roseiflexus castenholzii DSM 13941]
gi|156233361|gb|ABU58144.1| Ribulose-phosphate 3-epimerase [Roseiflexus castenholzii DSM 13941]
Length = 231
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 130/201 (64%), Gaps = 3/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+++PSILAADF RLGE+ + +AGA +H DVMDG FVPNIS G V+ +LR D
Sbjct: 11 IRLMPSILAADFLRLGEQAREVAEAGADGLHIDVMDGLFVPNISIGIPVVAALRRAVDLP 70
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + ++ AG IT H E+ H+ R+++ IH +G GVA+NP T +
Sbjct: 71 LDCHLMIVDPERYLEAFVTAGATHITVHVEACRHLHRTIQQIHDLGVTAGVALNPATSLT 130
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+ED++ ++D++L+M+V+PGF GQ I + KI + + ++ G + I L+VDGG+++
Sbjct: 131 AIEDILPDLDLVLMMSVDPGFSGQTYIPRSTAKIARLRRILDECGLQHIELQVDGGISAA 190
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
N+ +V AGA +V G+ FN
Sbjct: 191 NVADVVGAGATSIVAGTGVFN 211
>gi|302541073|ref|ZP_07293415.1| ribulose-phosphate 3-epimerase [Streptomyces hygroscopicus ATCC
53653]
gi|302458691|gb|EFL21784.1| ribulose-phosphate 3-epimerase [Streptomyces himastatinicus ATCC
53653]
Length = 230
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PSIL+ADFSRL +E + GA +H DVMD FVPN++ G V+ +L +D+
Sbjct: 1 MQINPSILSADFSRLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVEALGKATDTP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 59 MDCHLMIEDPDRWAPAYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARAAMALKPATPIE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
ED++ E+DM+L+MTV PGFGGQ ++ +PKIR+ + LI + + L+VDGGV++
Sbjct: 119 PYEDLLPELDMLLVMTVEPGFGGQAFLDIMLPKIRRTRELISRHGLEMWLQVDGGVSAST 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ + + + L L ++A
Sbjct: 179 IERCAEAGADVFVAGSAVYGAEDPDKAVRELRALAENA 216
>gi|301309165|ref|ZP_07215109.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 20_3]
gi|300832847|gb|EFK63473.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 20_3]
Length = 216
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+S D
Sbjct: 5 IAPSLLSANFLDLRKEVGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKSICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGA++LV G+ F I K L L
Sbjct: 185 RLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|261880696|ref|ZP_06007123.1| ribulose-phosphate 3-epimerase [Prevotella bergensis DSM 17361]
gi|270332468|gb|EFA43254.1| ribulose-phosphate 3-epimerase [Prevotella bergensis DSM 17361]
Length = 222
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 135/219 (61%), Gaps = 4/219 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA+DF+ L +E+ I ++ A +H DVMDG FVPNISFG V+R+++ D
Sbjct: 5 ISPSLLASDFANLKDEVDMINRSEADWLHCDVMDGSFVPNISFGFPVMRAVQKICTKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + + +I A G +++ H E+ H+ R++ I G GV +NP TPV +L
Sbjct: 65 VHYMIVNPERYIVQTAKVGAAVMSVHYEACVHLNRTIHEIQEEGMMAGVVLNPSTPVGML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
EDVI++ D++LIM+VNPGFGGQ+ IE+TI ++R+ + +I G ++ +EVDGGV
Sbjct: 125 EDVIEDADLVLIMSVNPGFGGQKFIENTIGRVRRLRRMIEESGSHAL-IEVDGGVNGTTA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
L+QAGAD+LV GS F I L ++ S A
Sbjct: 184 PRLIQAGADVLVSGSYVFGAADPIQTIHDLKNMSTSQRA 222
>gi|323440997|gb|EGA98704.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus O11]
Length = 214
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 134/214 (62%), Gaps = 5/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ DF L E+ + +AG +HFDVMDG FVPNIS G ++ ++R +
Sbjct: 3 KLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I A+ G D+I+ H ES+PHI R+++ I + KK GV INP TP++
Sbjct: 63 DVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+E ++D +D +L+MTVNPGFGGQ I+ + KI A+ +R ++ +EVDGG+ +
Sbjct: 123 IEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGLNTDTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K V+ GA +LV GS FF Q+ Y K LK
Sbjct: 183 KVCVENGATMLVTGSFFFKQE---DYKKVTQALK 213
>gi|260592189|ref|ZP_05857647.1| ribulose-phosphate 3-epimerase [Prevotella veroralis F0319]
gi|260535823|gb|EEX18440.1| ribulose-phosphate 3-epimerase [Prevotella veroralis F0319]
Length = 218
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF RL +EI I ++ A +H D+MDG FVPNISFG ++ ++ D
Sbjct: 5 VSPSLLSADFLRLDKEIEMINESDADWLHMDIMDGVFVPNISFGFPILEAVGKACKKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI +++I AD G I+ E+ H+ R+++ IH G K GV +NP TPV +L
Sbjct: 65 VHFMIVHPENYIQQTADTGAAIMNVQYEACVHLHRTIQAIHNAGMKAGVTLNPSTPVNVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++D++ +M+VNPGFGGQ+ IE TI K+++ + LI K + +EVDGGV
Sbjct: 125 EDIICDVDIVQLMSVNPGFGGQRFIEHTIKKVQRLRQLIEKENSKALIEVDGGVQQETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LVQAG D+LV GS F + L L++
Sbjct: 185 RLVQAGTDILVSGSYVFKASDPKAAIHSLKTLRR 218
>gi|304394970|ref|ZP_07376854.1| Ribulose-phosphate 3-epimerase [Pantoea sp. aB]
gi|304357223|gb|EFM21586.1| Ribulose-phosphate 3-epimerase [Pantoea sp. aB]
Length = 214
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 129/204 (63%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI A+ RL +EI + + + +H D+MDG +V NI+FG + I +++ S F
Sbjct: 3 QILPSIFGANILRLQDEIRFLEEENTEILHVDLMDGTYVSNIAFGPNQITAMKKASRMKF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M++ + HI+ + G ++I+ H ES+PH+ L+ I G+K GV INP TP +
Sbjct: 63 DVHMMLADPEKHIDAVIGTGAEMISVHYESTPHVHYILQKIRKAGRKAGVVINPGTPEGV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L ++D+ID ILIMT+NPG GQ IE ++ KI + +I +R+I +EVDGG+
Sbjct: 123 LSYLLDDIDYILIMTINPGQPGQTFIEKSLEKISNTRKMIAQRNIQIEVDGGINLTLASK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+ +AGADL+VVG + FN+ SY
Sbjct: 183 VKEAGADLIVVGGALFNEDPASSY 206
>gi|224535873|ref|ZP_03676412.1| hypothetical protein BACCELL_00737 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522596|gb|EEF91701.1| hypothetical protein BACCELL_00737 [Bacteroides cellulosilyticus
DSM 14838]
Length = 216
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +++ + ++ A +H DVMDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFAYLAKDLEMVNRSEADWVHIDVMDGVFVPNISFGFPVLKYVAKLSKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + IN + G + H E+ PH+ R ++ I G + V +NP TPVA+L
Sbjct: 65 VHLMIVQPEKFINEVKALGAHTMNVHFEACPHLHRVVQQIREAGMQPAVTLNPATPVAML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+L+M+VNPGFGGQ+ IE T+ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 KDIIQDVYMVLLMSVNPGFGGQKFIEHTVEKVRELRALIDSTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD LV GS+ F L DL
Sbjct: 184 ARLIAAGADALVAGSAVFAAPDPEGMIHSLKDL 216
>gi|237808723|ref|YP_002893163.1| ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
gi|237500984|gb|ACQ93577.1| ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
Length = 219
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 136/219 (62%), Gaps = 3/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS++ ADF++L EEI + AGA H DVMDG FVPN + G + I+++ +
Sbjct: 2 INICPSMMCADFTKLREEIIALEAAGADLFHIDVMDGHFVPNFAMGFEDIKAIAKLATIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM++ D +I A II H E+ H+ R++ I GK GVAINP TP+
Sbjct: 62 FDLHLMVNEPDQYIERFAATDAKIIYVHVEACTHLHRTIMKIKQAGKLAGVAINPGTPLT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+L+++I++ID +LIM+V+PGF GQ I S+I K+R+ K++I K S + ++VDG + N
Sbjct: 122 VLDEIINDIDYVLIMSVDPGFAGQSFITSSIDKVRRLKSMITKYSPNVKIKVDGSINKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ L AGA+ VVG++ + G YAK +N LK S +
Sbjct: 182 VPLLYAAGAEYFVVGTAGVFRDG-FDYAKNINILKNSTI 219
>gi|303232239|ref|ZP_07318938.1| ribulose-phosphate 3-epimerase [Atopobium vaginae PB189-T1-4]
gi|302481649|gb|EFL44710.1| ribulose-phosphate 3-epimerase [Atopobium vaginae PB189-T1-4]
Length = 225
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 126/203 (62%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSILA DFS+L E+ +I A A IHFDVMDG FVPN+SFG ++++++ S
Sbjct: 5 TIAIAPSILACDFSQLARELDSIRTADA--IHFDVMDGHFVPNLSFGVPLLQAVKRVSSL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H+M+S+ + I DAG D IT H E+ HI R + +I G+K VAINP + +
Sbjct: 63 PVDAHIMVSNPEEQIGWYIDAGADSITIHMEAQTHIHRMIYSIKNAGRKAAVAINPGSAI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L V+ +IDMIL+M+VNPGFGGQ I +T K+ A +R +EVDGGVT
Sbjct: 123 ESLSAVLPDIDMILVMSVNPGFGGQSFIPTTTQKVAALSAFCHERGYDPLIEVDGGVTEN 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
N L +AGA +LV GSS F +
Sbjct: 183 NAAELARAGARMLVAGSSVFKHE 205
>gi|308069669|ref|YP_003871274.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Paenibacillus polymyxa E681]
gi|305858948|gb|ADM70736.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Paenibacillus polymyxa E681]
Length = 222
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 125/200 (62%), Gaps = 3/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLG E++ GA IH DVMDG FV NI+ G +++++R ++
Sbjct: 2 LKIAPSILSADFARLGSEVAEAEAGGADWIHVDVMDGHFVSNITLGPPIVQAIRPHTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG +IIT H E+ H+ L I G GVA+NP T
Sbjct: 62 LDVHLMIEHPERYIGNFVKAGANIITVHAEACVHLHGVLHLIKQQGALAGVALNPGTSPY 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+++V+ +DMIL+MTVNPGFGGQ I T+ KIRQ +A +G+ + +EVDGG+
Sbjct: 122 AIKEVLPNVDMILVMTVNPGFGGQSFIPETLNKIRQIRAWLNELGRPDVHIEVDGGIAEE 181
Query: 182 NIKSLVQAGADLLVVGSSFF 201
++ +AGAD+LV GS+ F
Sbjct: 182 TAPAVFEAGADVLVAGSAVF 201
>gi|297198308|ref|ZP_06915705.1| ribulose-phosphate 3-epimerase [Streptomyces sviceus ATCC 29083]
gi|197715561|gb|EDY59595.1| ribulose-phosphate 3-epimerase [Streptomyces sviceus ATCC 29083]
Length = 228
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 130/221 (58%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGASSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ AGAD+ V GS+ + + L + + A A
Sbjct: 180 TIERCADAGADVFVAGSAVYGASDPAEAVRALRNQAEGATA 220
>gi|21219966|ref|NP_625745.1| ribulose-phosphate 3-epimerase [Streptomyces coelicolor A3(2)]
gi|256788934|ref|ZP_05527365.1| ribulose-phosphate 3-epimerase [Streptomyces lividans TK24]
gi|289772822|ref|ZP_06532200.1| ribulose-phosphate 3-epimerase [Streptomyces lividans TK24]
gi|18203210|sp|Q9L0Z5|RPE_STRCO RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|7209224|emb|CAB76886.1| ribulose-phosphate 3-epimerase [Streptomyces coelicolor A3(2)]
gi|289703021|gb|EFD70450.1| ribulose-phosphate 3-epimerase [Streptomyces lividans TK24]
Length = 228
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELIKKHGLELWLQVDGGVSAA 179
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ AGAD+ V GS+ +
Sbjct: 180 TIERCADAGADVFVAGSAVYG 200
>gi|328957303|ref|YP_004374689.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. 17-4]
gi|328673627|gb|AEB29673.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. 17-4]
Length = 227
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 134/217 (61%), Gaps = 2/217 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++ PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FGAD + ++R +
Sbjct: 11 KMKLAPSILSADFANLARDIQLVEDGGADYIHVDVMDGHFVPNITFGADTVAAIRPVTKL 70
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM+ +++I A AG DIIT HPES+PHI R ++ I G K G+A+NP TP+
Sbjct: 71 PLDCHLMVEYPENYIKQFAAAGADIITVHPESTPHIHRVIQLIKDQGVKAGIAVNPGTPI 130
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSR 181
+ ++ ID++L+MTVNPG+GGQ I + KI++AK + + + E VDGG+ +
Sbjct: 131 ESMIHILGVIDLVLVMTVNPGYGGQSFIPEMLKKIKKAKEIKDREGYTYEIQVDGGIGEQ 190
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K +AGA + V GS +N + ++ L D K
Sbjct: 191 TAKQCKEAGATVFVAGSYIYNAEDPLNQMALLMDAVK 227
>gi|293372313|ref|ZP_06618698.1| ribulose-phosphate 3-epimerase [Bacteroides ovatus SD CMC 3f]
gi|292632755|gb|EFF51348.1| ribulose-phosphate 3-epimerase [Bacteroides ovatus SD CMC 3f]
Length = 216
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSQKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + +L++L
Sbjct: 184 ARLVEAGADALVAGNAVFAAPDPEAMISQLHEL 216
>gi|294628318|ref|ZP_06706878.1| ribulose-phosphate 3-epimerase [Streptomyces sp. e14]
gi|292831651|gb|EFF90000.1| ribulose-phosphate 3-epimerase [Streptomyces sp. e14]
Length = 228
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEDPDRWAPQYVEAGASSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+L+MTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLVMTVEPGFGGQAFLDIMLPKIRRTRELIAKHGLQLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ +AGAD+ V GS+ + + + L
Sbjct: 180 TIERCAEAGADVFVAGSAVYGAENPAEAVRALR 212
>gi|52840901|ref|YP_094700.1| D-ribulose-5-phosphate-3-epimerase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628012|gb|AAU26753.1| D-ribulose-5-phosphate-3-epimerase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 217
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSD 62
+ QI+PS+L+AD +RLGEE+ + KAGA IHFDVMD +VPN++FG +L + + +
Sbjct: 2 TFQILPSLLSADVTRLGEEVDTVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIKKFPN 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + +D+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP T
Sbjct: 62 LPIDVHLMTTPVDTLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L + +L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +N
Sbjct: 122 IDTLTWCAHNLKFVLVMTVNPGFGGQKLIPEVIPKLSKIRQ--QHPNLDLCVDGGVTPQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I SL AGA+ V GS+ FN KR+ +
Sbjct: 180 IASLAHAGANQFVAGSAIFNSSNYSETIKRMRE 212
>gi|288803661|ref|ZP_06409091.1| ribulose-phosphate 3-epimerase [Prevotella melaninogenica D18]
gi|288333901|gb|EFC72346.1| ribulose-phosphate 3-epimerase [Prevotella melaninogenica D18]
Length = 218
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 135/216 (62%), Gaps = 5/216 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PS+L+ADF L +EI I ++ A +H DVMDG FVPNISFG V+ ++
Sbjct: 2 EIIVSPSLLSADFLHLDKEIEMINESEADWLHMDVMDGVFVPNISFGFPVLEAVGKACKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H MI +++I AD G I+ E+ H+ R+++ IHA G K GV +NP TPV
Sbjct: 62 PMDVHFMIVHPENYIQQTADTGAAIMNVQYEACVHLHRTIQAIHAAGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LED+I ++D++ +M+VNPGFGGQ+ IES+I K+++ + LI + + +EVDGGV +
Sbjct: 122 NVLEDIIGDVDIVQLMSVNPGFGGQKFIESSIKKVQRLRQLIEREGSNALIEVDGGVQAD 181
Query: 182 NIKSLVQAGADLLVVGSSFF---NQKGEISYAKRLN 214
LV+AG D+LV GS F + K I K+L+
Sbjct: 182 TAPRLVEAGVDILVSGSYVFKAADPKATIHSLKQLH 217
>gi|271964335|ref|YP_003338531.1| ribulose-phosphate 3-epimerase [Streptosporangium roseum DSM 43021]
gi|270507510|gb|ACZ85788.1| Ribulose-phosphate 3-epimerase [Streptosporangium roseum DSM 43021]
Length = 218
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL E + + A +H DVMD FVPN++ G V+ SL + +
Sbjct: 2 AVQISPSILSADFARLAEAAAAVPNA--DWLHVDVMDNHFVPNLTLGLPVVESLLRATST 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H E+S R+LR I A G ++G A+NP TPV
Sbjct: 60 PLDCHLMIEDPDRWAPAYAEAGAGSVTIHAEASKAPVRTLRQIRAAGARSGFALNPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
ED++ EIDM+L+MTV PGFGGQ+ ++ +PKIR+A+ALI K + L+VDGGV+ +
Sbjct: 120 EPYEDLLGEIDMLLLMTVEPGFGGQKFLDVVLPKIRRARALIDKHGGQVWLQVDGGVSDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
I+ +AGAD+ V G++ + +
Sbjct: 180 TIERCAEAGADVFVAGNAVYGAE 202
>gi|224372281|ref|YP_002606653.1| ribulose-phosphate 3-epimerase [Nautilia profundicola AmH]
gi|223589773|gb|ACM93509.1| ribulose-phosphate 3-epimerase [Nautilia profundicola AmH]
Length = 213
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 134/215 (62%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF L E++ + AGA IH DVMDG FVPN++ G +++++ +
Sbjct: 1 MKIAPSILSADFGNLAEDVKAVCDAGADLIHVDVMDGHFVPNMTMGPMIVKAVAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+ I I++ D + I+FH E HI R ++ I G + V +NP TPV+
Sbjct: 61 LDIHFMVEDIPFFIDLYKDLKPEFISFHIEEEKHINRVIQKIRNEGIRPAVVLNPATPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+LE ++ ++DM+L+M+VNPGFGGQ+ I S + K ++ + L K++ SL E+DGGV +N
Sbjct: 121 LLEYIVADVDMVLLMSVNPGFGGQKFIPSVLDKTKELRELAEKKNPSLLIEIDGGVNDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L +AGAD+LV GS F G Y+K +N L+
Sbjct: 181 APLLKEAGADILVAGSYVF---GSDDYSKVINSLR 212
>gi|302345645|ref|YP_003813998.1| ribulose-phosphate 3-epimerase [Prevotella melaninogenica ATCC
25845]
gi|302150074|gb|ADK96336.1| ribulose-phosphate 3-epimerase [Prevotella melaninogenica ATCC
25845]
Length = 218
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 137/217 (63%), Gaps = 7/217 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PS+L+ADF L +EI I ++ A +H DVMDG FVPNISFG V+ ++
Sbjct: 2 EIIVSPSLLSADFLHLDKEIEMINESEADWLHMDVMDGVFVPNISFGFPVLEAVGKACKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H MI +++I AD G I+ E+ H+ R+++ IHA G K GV +NP TPV
Sbjct: 62 PMDVHFMIVHPENYIQQTADTGAAIMNVQYEACVHLHRTIQAIHAAGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTS 180
+LED+I ++D++ +M+VNPGFGGQ+ IES+I K+++ + LI G +++ +EVDGGV +
Sbjct: 122 NVLEDIIGDVDIVQLMSVNPGFGGQKFIESSIKKVQRLRQLIDREGSKAL-IEVDGGVQA 180
Query: 181 RNIKSLVQAGADLLVVGSSFF---NQKGEISYAKRLN 214
LV+AG D+LV GS F + K I K+L+
Sbjct: 181 DTAPRLVEAGVDILVSGSYVFKAADPKATIHSLKQLH 217
>gi|54296690|ref|YP_123059.1| ribulose-phosphate 3-epimerase [Legionella pneumophila str. Paris]
gi|53750475|emb|CAH11869.1| ribulose-phosphate 3-epimerase [Legionella pneumophila str. Paris]
Length = 217
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSD 62
+ QI+PS+L+AD +RLGEE+ + KAGA IHFDVMD +VPN++FG +L + + +
Sbjct: 2 TFQILPSLLSADMTRLGEEVDAVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIKKFPN 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + +D+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP T
Sbjct: 62 LPIDVHLMTTPVDTLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L + +L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +N
Sbjct: 122 IDTLTWCAHNLKFVLVMTVNPGFGGQKLIPEVIPKLSKIRQ--QYPNLDLCVDGGVTPQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I SL AGA+ V GS+ FN KR+ +
Sbjct: 180 IASLAHAGANQFVAGSAIFNSSNYSETIKRMRE 212
>gi|226494111|ref|NP_001142197.1| hypothetical protein LOC100274365 [Zea mays]
gi|194701420|gb|ACF84794.1| unknown [Zea mays]
gi|194707566|gb|ACF87867.1| unknown [Zea mays]
Length = 274
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LG+++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 51 IIVSPSILSANFAKLGDQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 110
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 111 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTSTIHLHRTVNQIKSLGAKAGVVLNPATP 170
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++ V+D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGGV
Sbjct: 171 LTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRLCAEKGVNPWIEVDGGVGP 230
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ +V GS+ F G YA+ + +K S
Sbjct: 231 KNAYKVIEAGANAIVAGSAVF---GAPDYAEAIKGIKTS 266
>gi|325297464|ref|YP_004257381.1| ribulose-phosphate 3-epimerase [Bacteroides salanitronis DSM 18170]
gi|324317017|gb|ADY34908.1| ribulose-phosphate 3-epimerase [Bacteroides salanitronis DSM 18170]
Length = 220
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 126/203 (62%), Gaps = 2/203 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+LAA+F L E+ I + A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKKELIISPSLLAANFGNLERELEKINNSEADWLHIDIMDGVFVPNISFGFPVLKYVSKL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+ D HLMI + I+ + D G ++ H E+ H+ R ++ I G K GV +NP
Sbjct: 61 SEKPLDVHLMIVQPEKFIHEVKDLGTMMMNVHYEACVHLHRVVQQIKDAGMKAGVTLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++LED+I ++DM+L+M VNPGFGGQ+ IE TI K+R + LI + S +EVDGGV
Sbjct: 121 TPVSMLEDIIRDVDMVLLMGVNPGFGGQKFIEHTIGKVRVLRELIERTGSSALIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFF 201
LV+AG D+LV GS+ F
Sbjct: 181 NLDTGARLVEAGTDVLVTGSAVF 203
>gi|237719190|ref|ZP_04549671.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_2_4]
gi|229451569|gb|EEO57360.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_2_4]
Length = 216
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSQKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLYRVIQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + +L++L
Sbjct: 184 ARLVEAGADALVAGNAVFAAPDPEAMISQLHEL 216
>gi|291297243|ref|YP_003508641.1| ribulose-phosphate 3-epimerase [Meiothermus ruber DSM 1279]
gi|290472202|gb|ADD29621.1| ribulose-phosphate 3-epimerase [Meiothermus ruber DSM 1279]
Length = 224
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + + PSIL ADF+RLGE+I AG IH DVMDG FVPN++FG V+ ++R +
Sbjct: 2 PKLLVAPSILTADFARLGEQIREAEAAGVDWIHLDVMDGRFVPNLTFGPLVVEAIRKVTA 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + +I A AG D IT H E++PH R+++ I +GKK G+AINP TP
Sbjct: 62 LPLDVHLMIVEPERYIADFARAGADWITVHHEATPHAHRAVQQIKELGKKAGLAINPGTP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ L ++ E+D+ L+M+VNPGFGGQ+ I ++ +IR+ AL G+ + + ++VDGG+
Sbjct: 122 LEALLPLLPELDLALLMSVNPGFGGQKYIPASTERIRRLAALRGQMNPACLIQVDGGIKP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
N+ + +AGAD++VVGS+ FN + K+L
Sbjct: 182 VNVAEVYRAGADVVVVGSALFNNRPVAENMKKL 214
>gi|154492626|ref|ZP_02032252.1| hypothetical protein PARMER_02260 [Parabacteroides merdae ATCC
43184]
gi|154087851|gb|EDN86896.1| hypothetical protein PARMER_02260 [Parabacteroides merdae ATCC
43184]
Length = 216
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LAADF L E+ I ++ A +H D+MDG FVPNISFG V+ +L+
Sbjct: 4 KIAPSLLAADFLNLQREVEMINESDADWLHLDIMDGVFVPNISFGFPVLEALKPICKKPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI I +A G ++ H E+ H+ R++ I G K V +NP TP+++
Sbjct: 64 DVHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKEAGMKAAVTLNPHTPISL 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED++ ++DM+L+M+VNPG+GGQ+ IE +I K + K +I + ++ +EVDGGV +
Sbjct: 124 LEDILQDLDMVLLMSVNPGYGGQKFIEHSIDKTARLKDMILAKGLNTLIEVDGGVNMQTA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K L++ GAD+LV GS F + + L DL
Sbjct: 184 KPLLEVGADVLVAGSFVFRSPDPLKTIRELKDL 216
>gi|149276243|ref|ZP_01882387.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Pedobacter sp. BAL39]
gi|149232763|gb|EDM38138.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Pedobacter sp. BAL39]
Length = 223
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+ L +I I + A H DVMDG FVPNISFG V+ +++ Y+ D
Sbjct: 5 IAPSVLSADFANLQRDIEMINSSAADWFHVDVMDGVFVPNISFGFPVMEAIKKYATKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I A AG +IT H E+ H+ R++++IHA G K GVAINP TPV++L
Sbjct: 65 VHLMIVNPDQYIERFAAAGAHLITVHYEACIHLHRTVQSIHAAGCKAGVAINPHTPVSLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
D++ ++D++L+M+VNPGFGGQ+ I +T K+R+ KA+ + L EVDGGV N+
Sbjct: 125 RDILPDLDLVLVMSVNPGFGGQKFIPNTYNKLRELKAMANDLNPELIIEVDGGVGIHNLG 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGA V G++ F + I + +L
Sbjct: 185 ELIAAGAAAFVAGNAIFAAESPIQMIAEMKNL 216
>gi|182439856|ref|YP_001827575.1| ribulose-phosphate 3-epimerase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326780520|ref|ZP_08239785.1| ribulose-phosphate 3-epimerase [Streptomyces cf. griseus XylebKG-1]
gi|178468372|dbj|BAG22892.1| putative ribulose-phosphate 3-epimerase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326660853|gb|EGE45699.1| ribulose-phosphate 3-epimerase [Streptomyces cf. griseus XylebKG-1]
Length = 227
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ ++ +D
Sbjct: 3 QINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPIVEAIGKATDIPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEDPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LIGK + L+VDGGV++ I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELIGKHGLELWLQVDGGVSATTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGAD+ V GS+ + + + + L
Sbjct: 181 ERCAEAGADVFVAGSAVYGAQDPAAAVRELR 211
>gi|256961115|ref|ZP_05565286.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|293384061|ref|ZP_06629955.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|293386875|ref|ZP_06631445.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|312907988|ref|ZP_07766971.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|312978484|ref|ZP_07790222.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
gi|256951611|gb|EEU68243.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|291078541|gb|EFE15905.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|291083709|gb|EFE20672.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|310626079|gb|EFQ09362.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|311288633|gb|EFQ67189.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
Length = 214
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 126/204 (61%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI AD L ++I+ + + + +H D+MDG FV NI+FG + I ++ S +F
Sbjct: 3 QILPSIFGADIMHLQDDINFLEEENTQILHVDLMDGNFVSNIAFGPNQIAEMKKNSTMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ HI+ + G ++I+ H ES+PHI L+ I G+K GV INP T +
Sbjct: 63 DVHMMVKHPKDHIDDVLATGAEMISVHYESTPHIHSILQKIRQAGRKAGVVINPGTSEVV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE ++D+ID ILIMT+NPG GQ I ++ KIR K LIG R I +EVDGGV +
Sbjct: 123 LEYLLDDIDYILIMTINPGQPGQSFIPKSLEKIRNTKQLIGHRKIDIEVDGGVNKEIAEK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
V+AGA+L+VVG + F+ + Y
Sbjct: 183 CVKAGAELIVVGGALFSGDKQAQY 206
>gi|323340713|ref|ZP_08080965.1| ribulose-phosphate 3-epimerase [Lactobacillus ruminis ATCC 25644]
gi|323091836|gb|EFZ34456.1| ribulose-phosphate 3-epimerase [Lactobacillus ruminis ATCC 25644]
Length = 220
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 134/215 (62%), Gaps = 2/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L ++ + +AGAK +H D+MDG FV N++FG +V+++LR S+ FD
Sbjct: 3 IAPSILSADFANLAADVKAVEEAGAKYLHIDIMDGHFVDNLTFGPNVVKALRPLSNLFFD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLM+ + ++ A AG D++ H E++ H R + IH +G K + +NP T +
Sbjct: 63 CHLMVEDPEKYLQDFAAAGADLVGVHIEATKHAHRVISKIHQLGMKAEIVLNPGTSLEFA 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++V+ +D +LIMTV+PGFGGQ +E T+ KI +A+ + +++ +EVDGG+ + IK
Sbjct: 123 KEVLPLVDSVLIMTVDPGFGGQAFLEETVSKIAEAEKYRKEHNLNYQIEVDGGINDQTIK 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGA + V GS F+Q K+L + K
Sbjct: 183 TAKAAGATIAVAGSYVFSQNTPEEQIKKLIEASKQ 217
>gi|299143979|ref|ZP_07037059.1| ribulose-phosphate 3-epimerase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518464|gb|EFI42203.1| ribulose-phosphate 3-epimerase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 215
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 126/197 (63%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ DF+ + ++ + +A A +H D+MDG +VPNISFG ++ R +D FD
Sbjct: 2 ISPSILSCDFTNVKKDFDAMNEAKADFVHIDIMDGNYVPNISFGPSIVSQFRKLTDIDFD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ + +I AG +IIT HP+S+ H+ R++ I + G K G+AINP ++IL
Sbjct: 62 VHLMINEPEKYIEDFVKAGANIITIHPDSTLHLNRTINLIKSFGIKAGIAINPAQELSIL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+ +++ID++LIM+VNPGFGGQ IES+ K+ K +I K +EVDGG+ N
Sbjct: 122 DYTLEDIDLVLIMSVNPGFGGQSFIESSTRKVEDVKKIINNAKSKCLIEVDGGIKLNNAL 181
Query: 185 SLVQAGADLLVVGSSFF 201
+ AGAD+LV GS+ F
Sbjct: 182 KVYNAGADILVAGSAIF 198
>gi|189463826|ref|ZP_03012611.1| hypothetical protein BACINT_00159 [Bacteroides intestinalis DSM
17393]
gi|189438776|gb|EDV07761.1| hypothetical protein BACINT_00159 [Bacteroides intestinalis DSM
17393]
Length = 216
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 7/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +++ + ++ A +H DVMDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFAYLAKDLEMLNRSEADWVHIDVMDGVFVPNISFGFPVLKYVAKISKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I+ + G + H E+ PH+ R ++ I G + V +NP TPVA+L
Sbjct: 65 VHLMIVQPEKFIHEVKALGAHTMNVHFEACPHLHRVVQQIREAGMQPAVTLNPATPVAML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+L+M+VNPGFGGQQ IE TI K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 KDIIQDVYMVLLMSVNPGFGGQQFIEHTIEKVRELRALIDSTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
LV AGAD LV G++ F + +G I K L
Sbjct: 184 ARLVAAGADALVAGNAVFAAPDPEGMIHSLKEL 216
>gi|297733953|emb|CBI15200.3| unnamed protein product [Vitis vinifera]
Length = 290
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 138/220 (62%), Gaps = 7/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G ++ +LR +D
Sbjct: 59 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVGALRPVTDLP 118
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 119 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPATP 178
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGV
Sbjct: 179 LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRICAEKGVNPWIEVDGGVGP 238
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N +++AGA+ LV GS+ F K YA+ ++ K A
Sbjct: 239 ANAYKVIEAGANALVAGSAVFGAK---DYAEGMDSELKPA 275
>gi|229544984|ref|ZP_04433709.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|229309876|gb|EEN75863.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
Length = 214
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 126/204 (61%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI AD L ++I+ + + + +H D+MDG FV NI+FG + I ++ S +F
Sbjct: 3 QILPSIFGADIMHLQDDINFLEEENTQILHVDLMDGNFVSNIAFGPNQIAEMKKNSTMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ HI+ + G ++I+ H ES+PHI L+ I G+K GV INP T +
Sbjct: 63 DVHMMVKHPKDHIDDVLATGAEMISVHYESTPHIHSILQKIRQAGRKAGVVINPGTSEVV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE ++D+ID ILIMT+NPG GQ I ++ KIR K LIG R I +EVDGGV +
Sbjct: 123 LEYLLDDIDYILIMTINPGQPGQTFIPKSLEKIRNTKQLIGDRKIDIEVDGGVNKEIAEK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
V+AGA+L+VVG + F+ + Y
Sbjct: 183 CVKAGAELIVVGGALFSGDKQAQY 206
>gi|193212188|ref|YP_001998141.1| Ribulose-phosphate 3-epimerase [Chlorobaculum parvum NCIB 8327]
gi|193085665|gb|ACF10941.1| Ribulose-phosphate 3-epimerase [Chlorobaculum parvum NCIB 8327]
Length = 220
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L + KAGA +H DVMDG FVPNI+FG ++++++ + V D
Sbjct: 8 LAPSILSADFTNLKASVELAEKAGADWMHCDVMDGVFVPNITFGPFIVKAIKQCTSLVID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I A AG D IT H E+ PH+ R+++ I + G K GV+INP TPV++L
Sbjct: 68 THLMIIDPDKYIEDFAKAGSDQITVHLEACPHLHRTIQFIKSFGVKAGVSINPATPVSLL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E V+ ++D++L+M+VNPGFGGQ+ I +++ KI A+ + + + + VDGG+T N
Sbjct: 128 EPVLADLDLVLLMSVNPGFGGQKFIPASVAKIANLDAMRMEMNPDMVIAVDGGITEENAA 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+V+AGAD L+ G++FF ++ A++L L+
Sbjct: 188 QVVEAGADSLIAGTAFFRAADPMAAARKLKGLE 220
>gi|16804696|ref|NP_466181.1| hypothetical protein lmo2659 [Listeria monocytogenes EGD-e]
gi|47095463|ref|ZP_00233072.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|224499332|ref|ZP_03667681.1| hypothetical protein LmonF1_06407 [Listeria monocytogenes Finland
1988]
gi|254830908|ref|ZP_05235563.1| hypothetical protein Lmon1_06089 [Listeria monocytogenes 10403S]
gi|254899889|ref|ZP_05259813.1| hypothetical protein LmonJ_08746 [Listeria monocytogenes J0161]
gi|254912905|ref|ZP_05262917.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
gi|254937286|ref|ZP_05268983.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|16412159|emb|CAD00872.1| lmo2659 [Listeria monocytogenes EGD-e]
gi|47016073|gb|EAL06997.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|258609893|gb|EEW22501.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|293590906|gb|EFF99240.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
Length = 214
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 129/214 (60%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R K S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDNWRRKNHGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
QAG D+LV GS FF G A + LKK
Sbjct: 184 KCKQAGVDILVAGSYFF---GATDKAACIQGLKK 214
>gi|194367497|ref|YP_002030107.1| ribulose-phosphate 3-epimerase [Stenotrophomonas maltophilia
R551-3]
gi|194350301|gb|ACF53424.1| Ribulose-phosphate 3-epimerase [Stenotrophomonas maltophilia
R551-3]
Length = 224
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 136/201 (67%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILSANFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG I+FHPE+S H+ R+++ I ++G K G+ +NP TPV I
Sbjct: 66 DVHLMVEPVDRIIPDFAEAGATYISFHPEASRHVHRTIQLIRSLGCKPGIVLNPATPVDI 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D++L+M+VNPGFGGQ I S + K+R + I R I LE+DGGV + NI
Sbjct: 126 LDWVLDDLDLVLLMSVNPGFGGQAFIPSALDKLRVVRKKIDASGRDIRLEIDGGVKADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ AGAD V GS+ FN K
Sbjct: 186 GEIAAAGADTFVAGSAIFNAK 206
>gi|290891845|ref|ZP_06554842.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|290558439|gb|EFD91956.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
Length = 214
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 127/204 (62%), Gaps = 2/204 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ ++ + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIKKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R + S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDNWRRENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
QAG D+LV GS FF +++
Sbjct: 184 KCKQAGVDVLVAGSYFFGATDKVA 207
>gi|302533352|ref|ZP_07285694.1| ribulose-phosphate 3-epimerase [Streptomyces sp. C]
gi|302442247|gb|EFL14063.1| ribulose-phosphate 3-epimerase [Streptomyces sp. C]
Length = 228
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 4/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G V+ SL +D
Sbjct: 2 AVQINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLSRATDI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDLHLMIEDPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARAAMALKPGTPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PK+R+ + LI K + L+VDGGV++
Sbjct: 120 EQYEDILPELDMVLIMTVEPGFGGQSFLDIMLPKVRRTRELIAKHGLDLWLQVDGGVSAT 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ + +AGAD+ V GS+ + + + L D
Sbjct: 180 TIERVAEAGADVFVAGSAVYGAVDPAAAVRTLRD 213
>gi|188997412|ref|YP_001931663.1| Ribulose-phosphate 3-epimerase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932479|gb|ACD67109.1| Ribulose-phosphate 3-epimerase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 220
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 129/205 (62%), Gaps = 5/205 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFS LG++I + +AGA IH D+MDG +VPNI+FG V+ S+R +D FD
Sbjct: 4 LAPSILSADFSILGQQIKEVEEAGADIIHLDIMDGRYVPNITFGPPVVESIRKITDLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I AG ++I+FH +++ H R + I + K GV +NP TPV L
Sbjct: 64 AHLMIVEPEKYIPDFIKAGVNMISFHMDATIHAHRVVDMIKSNDVKAGVVLNPATPVNTL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
E++I ID +LIM+VNPGFGGQ+ I T K+++ K L+ + I +E+DGGV NI
Sbjct: 124 EEIIYYIDYVLIMSVNPGFGGQKFIPQTAEKVKKLKLLMEETNRTDILIEIDGGVNQDNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
L G ++ V G++ F KG I
Sbjct: 184 NYLSMLGVNIFVAGNAVF--KGNIK 206
>gi|254522470|ref|ZP_05134525.1| ribulose-phosphate 3-epimerase [Stenotrophomonas sp. SKA14]
gi|219720061|gb|EED38586.1| ribulose-phosphate 3-epimerase [Stenotrophomonas sp. SKA14]
Length = 229
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 137/201 (68%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 11 IAPSILSANFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHGVTAPI 70
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG I+FHPE+S H+ R+++ I ++G K G+ +NP TPV I
Sbjct: 71 DVHLMVEPVDRIIPDFAEAGATYISFHPEASRHVHRTIQLIRSLGCKPGIVLNPATPVDI 130
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D++L+M+VNPGFGGQ I S + K+R + +I + I LE+DGGV + NI
Sbjct: 131 LDWVLDDLDLVLLMSVNPGFGGQAFIPSALDKLRVVRKMIDASGKDIRLEIDGGVKADNI 190
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ AGAD V GS+ FN +
Sbjct: 191 GEIAAAGADTFVAGSAIFNAR 211
>gi|306820534|ref|ZP_07454167.1| ribulose-phosphate 3-epimerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551448|gb|EFM39406.1| ribulose-phosphate 3-epimerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 217
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 7 IVPSILAADFSRLGEEISNIT-KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADFS +G +I + K +H DVMDG FVPNIS G I+S+R S+ +F
Sbjct: 4 IAPSILSADFSNIGRDIKEVEDNTNCKYLHIDVMDGMFVPNISIGQVFIKSIRKASNMIF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ +G DI+T H E++ H+ R L I G K GV +NP TP+
Sbjct: 64 DVHLMIERPERYVEDFQKSGADILTVHCEATNHLHRVLAHIRQCGMKAGVTLNPATPIEN 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ V+D +D++L+M+VNPGFGGQ I +++ KI + K + + +E+DGGV I
Sbjct: 124 IIPVLDMVDLVLVMSVNPGFGGQSFIRNSLTKIEKLKKWKEEYGYNYIIEIDGGVNESTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKG 205
+ +AGA+L V GS+ FN KG
Sbjct: 184 SEISKAGAELFVAGSAVFNNKG 205
>gi|119716672|ref|YP_923637.1| ribulose-phosphate 3-epimerase [Nocardioides sp. JS614]
gi|119537333|gb|ABL81950.1| ribulose-5-phosphate 3-epimerase [Nocardioides sp. JS614]
Length = 220
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 126/200 (63%), Gaps = 4/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL ADF+ LG E++ I A +H DVMD FVPN++FG ++ +L ++
Sbjct: 3 IQITPSILNADFAALGAEVARI--GSADWVHVDVMDNHFVPNLTFGPTMVEALARSTEVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ D H +AGC +TFH E++ R R I A G + +A+ P TPV
Sbjct: 61 LDAHLMVEVPDRHALAYVEAGCGSVTFHVEAAQAPVRLAREIRAHGARASMALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
ED++ E+DM+LIMTV PGFGGQ+ ++ +PKIR+A+ L+ K + L+VDGG++
Sbjct: 121 PYEDLLPELDMLLIMTVEPGFGGQRFLDLCLPKIRRARELMDKHGLETWLQVDGGISLET 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I+ V AGAD+ V GS+ ++
Sbjct: 181 IERCVDAGADVFVAGSAVYS 200
>gi|302550111|ref|ZP_07302453.1| ribulose-phosphate 3-epimerase [Streptomyces viridochromogenes DSM
40736]
gi|302467729|gb|EFL30822.1| ribulose-phosphate 3-epimerase [Streptomyces viridochromogenes DSM
40736]
Length = 228
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 6/213 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AAQINPSILSADFARLADEAKAVQ--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFF--NQKGEISYAKR 212
I+ AGAD+ V GS+ + N E A R
Sbjct: 180 TIERCADAGADVFVAGSAVYGANDPAEAVRALR 212
>gi|313886426|ref|ZP_07820145.1| ribulose-phosphate 3-epimerase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924107|gb|EFR34897.1| ribulose-phosphate 3-epimerase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 215
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L+ADF L +EI+ I ++ +H DVMDG FVPN+SFG +I ++R D H
Sbjct: 6 PSLLSADFLHLADEITMINESQCDWLHIDVMDGVFVPNLSFGFPIIEAIRPICQKPLDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI I+ A G I+ H E PH+ R+LR I G + V +NP TPV +L D
Sbjct: 66 LMIVEPWKFIDQFAKLGIHIMNVHYEVCPHLHRTLRAIREAGMRPAVTLNPHTPVELLTD 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
++ E DM+L+M+VNPG+GGQ+ IE +I K+ + + +I ++ +S ++VDGGV + L
Sbjct: 126 ILCEADMVLLMSVNPGYGGQKFIEQSIRKVERLRKMIQEQGLSTLIQVDGGVNLETGRQL 185
Query: 187 VQAGADLLVVGSSFFN 202
V+AGAD LV GS+ F
Sbjct: 186 VEAGADSLVAGSAVFK 201
>gi|282882095|ref|ZP_06290736.1| ribulose-phosphate 3-epimerase [Peptoniphilus lacrimalis 315-B]
gi|281298125|gb|EFA90580.1| ribulose-phosphate 3-epimerase [Peptoniphilus lacrimalis 315-B]
Length = 214
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 138/214 (64%), Gaps = 9/214 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ + E+ + + IH D+MDG +VPNISFG +++ LR+ +D FD
Sbjct: 2 LAPSILSADFTNIREDFKIMNEEKCDFIHVDIMDGNYVPNISFGPGIVKQLRTLTDIKFD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++I A +G DIIT HP ++ H+ R+L I + G K G+A+NP + L
Sbjct: 62 THLMIENPENYIKDFAQSGSDIITIHPSTTKHLDRTLNLIKSYGMKCGIALNPSDDLTCL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ ++ ++ ++LIM+VNPGFGGQ IE+++ KI+ + +I S +EVDGGV N +
Sbjct: 122 KYILKDLYLVLIMSVNPGFGGQSFIENSLLKIKDLRNIIKNNSYDTLIEVDGGVKIDNAQ 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ AGAD+LV GS F KG+I N++KK
Sbjct: 182 KILDAGADILVSGSGVF--KGDIR-----NNIKK 208
>gi|255015480|ref|ZP_05287606.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_7]
Length = 216
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+ D
Sbjct: 5 IAPSLLSANFLDLRKEMEMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGA++LV G+ F I K L L
Sbjct: 185 RLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|226532822|ref|NP_001148585.1| ribulose-phosphate 3-epimerase [Zea mays]
gi|195620592|gb|ACG32126.1| ribulose-phosphate 3-epimerase [Zea mays]
Length = 274
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LG+++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 51 IIVSPSILSANFAKLGDQVKAVEVAGCDWIHVDVMDGRFVPNITIGPFVVDALRPVTDLP 110
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 111 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTSTIHLHRTVNQIKSLGAKAGVVLNPATP 170
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++ ++D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGGV
Sbjct: 171 LTAIDYILDVVDLVLIMSVNPGFGGQSFIESQVRKIAELRRLCAEKGVNPWIEVDGGVGP 230
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ +V GS+ F G YA+ + +K S
Sbjct: 231 KNAYKVIEAGANAIVAGSAVF---GAPDYAEAIKGIKTS 266
>gi|298384887|ref|ZP_06994446.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 1_1_14]
gi|298262031|gb|EFI04896.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 1_1_14]
Length = 216
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 133/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L +I I ++ A+ +H D+MDG FVPNISFG V++ + +D D
Sbjct: 5 ISPSILSADFGYLARDIEMINRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLTDKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ H+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACTHLHRVIQQIKEAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIQDVYMVLIMSVNPGFGGQKFIEYSVEKVRELRALIERAGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F ++L+ L
Sbjct: 184 ARLVEAGADVLVAGNAVFGAPDPEEMIRQLHKL 216
>gi|256839387|ref|ZP_05544896.1| ribulose-phosphate 3-epimerase [Parabacteroides sp. D13]
gi|298375096|ref|ZP_06985053.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_19]
gi|256738317|gb|EEU51642.1| ribulose-phosphate 3-epimerase [Parabacteroides sp. D13]
gi|298267596|gb|EFI09252.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_19]
Length = 216
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+ D
Sbjct: 5 IAPSLLSANFLDLRKEMEMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGA++LV G+ F I K L L
Sbjct: 185 RLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|29349354|ref|NP_812857.1| ribulose-phosphate 3-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341262|gb|AAO79051.1| ribulose-phosphate 3-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 216
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 133/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L +I I ++ A+ +H D+MDG FVPNISFG V++ + +D D
Sbjct: 5 ISPSILSADFGYLARDIEMINRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLTDKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ H+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACTHLHRVIQQIKEAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIQDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERAGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F ++L+ L
Sbjct: 184 ARLVEAGADVLVAGNAVFGAPDPEEMIRQLHKL 216
>gi|320534323|ref|ZP_08034812.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133458|gb|EFW25917.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 231
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 130/219 (59%), Gaps = 6/219 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKA----GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSIL D + L +E+ +T GA IH DVMD FVPN+S+G V+ ++ ++S
Sbjct: 4 IHPSILNCDIAHLADELDRVTGGAGTPGADGIHVDVMDNHFVPNLSWGLPVVEAVLAHSS 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D A+AGC I+T H E++ R R +H +G G+A+ P TP
Sbjct: 64 LPVDAHLMIRDADRWAPTYAEAGCQIVTPHAEATTAPVRLARELHRLGAGAGIALRPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ + DV+ + D++LIMTV PGFGGQ IES +PKI +A+ L+G R + L +VDGG+TS
Sbjct: 124 LEAVADVLGDFDLLLIMTVEPGFGGQSFIESMLPKIHRARELVGTRGLDLRVQVDGGITS 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ I+ +AGAD+ V GS+ + ++ L + S
Sbjct: 184 QTIERAAEAGADVFVAGSAVYRADDALAAISELREAASS 222
>gi|147817756|emb|CAN66664.1| hypothetical protein VITISV_031724 [Vitis vinifera]
Length = 312
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 137/216 (63%), Gaps = 7/216 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G ++ +LR +D
Sbjct: 59 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVGALRPVTDLP 118
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 119 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPATP 178
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGGV
Sbjct: 179 LSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRICAEKGVNPWIEVDGGVGP 238
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N +++AGA+ LV GS+ F K YA+ ++ +
Sbjct: 239 ANAYKVIEAGANALVAGSAVFGAK---DYAEGMDSV 271
>gi|307326813|ref|ZP_07606005.1| ribulose-phosphate 3-epimerase [Streptomyces violaceusniger Tu
4113]
gi|306887576|gb|EFN18570.1| ribulose-phosphate 3-epimerase [Streptomyces violaceusniger Tu
4113]
Length = 224
Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 130/219 (59%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADFSRL +E + GA +H DVMD FVPN++ G V+ SL +++
Sbjct: 2 ALQINPSILSADFSRLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLGKVTET 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIDDPDRWAPQYIEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+L+MTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLVMTVEPGFGGQAFLDIMLPKIRRTRQLIDKHGLQMWLQVDGGVSAA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ + + L L + A
Sbjct: 180 TIERCAEAGADVFVAGSAVYGADDPAKAVQALRRLAEKA 218
>gi|291549485|emb|CBL25747.1| ribulose-phosphate 3-epimerase [Ruminococcus torques L2-14]
Length = 220
Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LGE++ +AGA+ IHFDVMDG FVP+ISFG V+ S++ + D
Sbjct: 5 LAPSILSADFKILGEQLKLTEEAGAEYIHFDVMDGMFVPSISFGMPVLASIKGATTQTLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ ++ AG DI+T H E+ ++ ++ IHA G K G++I P+TPV +L
Sbjct: 65 VHLMVTEPIRYVEEFVKAGADIVTVHYEACEDLQATIDKIHAAGAKVGISIKPKTPVDVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D+ +M LIM+V PGFGGQ I ++ +I + + L+ ++ ++ +EVDGG+ +N+
Sbjct: 125 LPYLDQAEMFLIMSVEPGFGGQAFIPESLERISELRNLLNEKGLTTDIEVDGGIYHKNVA 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEI 207
++ AGA+++V GS F KG+I
Sbjct: 185 EVLAAGANVMVSGSGVF--KGDI 205
>gi|150008326|ref|YP_001303069.1| ribulose-phosphate 3-epimerase [Parabacteroides distasonis ATCC
8503]
gi|149936750|gb|ABR43447.1| ribulose-phosphate 3-epimerase [Parabacteroides distasonis ATCC
8503]
Length = 216
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+ D
Sbjct: 5 IAPSLLSANFLDLRKEMGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGA++LV G+ F I K L L
Sbjct: 185 RLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|116333598|ref|YP_795125.1| Pentose-5-phosphate-3-epimerase [Lactobacillus brevis ATCC 367]
gi|116098945|gb|ABJ64094.1| ribulose-5-phosphate 3-epimerase [Lactobacillus brevis ATCC 367]
Length = 217
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 130/216 (60%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L +I + KAGA+ +H D+MDG FVP +S+G ++++R + V
Sbjct: 2 IKVAPSILSADYVNLQPDIEMVDKAGAEVLHIDIMDGNFVPALSYGPGWVKAIRPITKMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + + ++ A AG DII H E++PHI R+L+ I G V INP TPV+
Sbjct: 62 LDVHMMVQNPERYVEDFAKAGADIIGVHVEATPHIHRALQMIQNAGVTPEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+D + +L+MTVNPGFGGQ+ + ST+ KI + A+ + +EVDGGV +
Sbjct: 122 AIEPVLDMVGQVLVMTVNPGFGGQKFLHSTVAKIAELDAIKKAKGYDFDIEVDGGVNDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGA + V GS FN +S + D K
Sbjct: 182 VVDCANAGATVAVAGSYVFNADDPVSRINAVKDATK 217
>gi|332298361|ref|YP_004440283.1| ribulose-phosphate 3-epimerase [Treponema brennaborense DSM 12168]
gi|332181464|gb|AEE17152.1| ribulose-phosphate 3-epimerase [Treponema brennaborense DSM 12168]
Length = 210
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 127/198 (64%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L + I + GA +H DVMDG FVP IS+G V+ +LR +++ FD
Sbjct: 6 LAPSLLSADFLHLDSALKRIEQGGASFVHIDVMDGRFVPQISYGQPVVSALRPHTELPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI ++HI+ AG D +TFH E++ H R + IH GKK G+A+ P TP+A+L
Sbjct: 66 VHLMIEQPENHIDSFIRAGADYLTFHWENTVHHHRIIGRIHDAGKKAGIAVVPSTPIAVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+++ +D++L+MTVNPGFGGQ I KI + + + +R + DGG+ + +
Sbjct: 126 EEILPYLDLVLVMTVNPGFGGQAFIPGCARKITELRRIKAERGYGFLISADGGINGQTLA 185
Query: 185 SLVQAGADLLVVGSSFFN 202
+++ AG D++V GS+FF+
Sbjct: 186 AVLDAGTDVVVSGSAFFS 203
>gi|302872117|ref|YP_003840753.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor obsidiansis
OB47]
gi|302574976|gb|ADL42767.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor obsidiansis
OB47]
Length = 221
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 129/206 (62%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL++DF+ L E+ + AGA +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 3 IKIAPSILSSDFADLKSELKKLEVAGADLVHIDVMDGNFVDNITIGAPVVSSLRKNSKLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TPV
Sbjct: 63 FDVHLMVVHPEKHIERFVQSGADNITVHAEATYHLDAIINRIKSFGKKASVALNPATPVY 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E+V+ +DM+LIMTVNPG+GGQ+ I T+ KI L K +S +EVDGG+
Sbjct: 123 MIENVLGIVDMVLIMTVNPGYGGQKFIPYTLKKIEILANLREKEGLSFEIEVDGGINEET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
I V AGA+++V GS F+ G++S
Sbjct: 183 IVDCVNAGANVIVAGSYVFDS-GDVS 207
>gi|217966142|ref|YP_002351820.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|217335412|gb|ACK41206.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|307572248|emb|CAR85427.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes L99]
Length = 214
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 126/204 (61%), Gaps = 2/204 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ ++ + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIKKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I STI +R + S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFINSTIKNMRYLDNWRRENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEIS 208
QAG D+LV GS FF +++
Sbjct: 184 KCKQAGVDVLVAGSYFFGATDKVA 207
>gi|16801869|ref|NP_472137.1| hypothetical protein lin2808 [Listeria innocua Clip11262]
gi|16415344|emb|CAC98034.1| lin2808 [Listeria innocua Clip11262]
Length = 214
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I +AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEQAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++ ++D++L MTVNPGFGGQ I+STI +R + S +EVDGGV + +
Sbjct: 124 DAILGDVDLVLQMTVNPGFGGQSFIDSTIENMRYLDNWRQENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
QAG D+LV GS FF +++ + L
Sbjct: 184 KCKQAGVDVLVAGSYFFGADDKVACVQGL 212
>gi|257877698|ref|ZP_05657351.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC20]
gi|257811864|gb|EEV40684.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC20]
Length = 217
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 128/200 (64%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 2 IKLAPSILSADFANLQRDIELVERHGADYIHVDVMDGHFVPNITLGPNIVKAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ + +I+ A+AG DII H E++PHI R+++ I A K + INP TPV+
Sbjct: 62 LDVHLMITEPEKYIHAFAEAGADIIGIHAEATPHIHRAIQMIVAENVKAEIVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+ D +L+MTVNPGFGGQ IE ++ KI AL ++ +EVDGG+
Sbjct: 122 AIEHVLSMCDQVLVMTVNPGFGGQSFIEESLEKIAVLAALKEEKGYHYDIEVDGGIVPET 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
K ++AGA++ V GS ++
Sbjct: 182 AKRCLEAGANVFVAGSYIYD 201
>gi|255522674|ref|ZP_05389911.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J1-175]
Length = 196
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
+ K G +H D+MDG FVPNI+FG D I+ ++ + FD H+M+ D +I + +AG
Sbjct: 3 LEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAG 62
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
+IT H E++ H+ R+++ I + G + GV +NP TP + LE V+D+ID IL+MTVNPG
Sbjct: 63 AHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGL 122
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K AGADL+VVGS F +G
Sbjct: 123 GGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKECTLAGADLIVVGSYLF--EG 180
Query: 206 EISYAKRLNDLKKSALA 222
+I L L K L
Sbjct: 181 DIE--ANLEKLSKGVLT 195
>gi|313636068|gb|EFS01957.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL S4-171]
Length = 214
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 129/210 (61%), Gaps = 2/210 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAELAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+++ +++I A AG II+ H E++PHI R ++ I G K GV +NP TP ++L
Sbjct: 64 VHLMLANPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKQAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++ ++D++L MTVNPGFGGQ I+ST+ +R K S +EVDGGV + +
Sbjct: 124 DAILGDVDLVLQMTVNPGFGGQAFIDSTLENMRYLDNWRRKNRGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
QAG D+LV GS FF + +++ K LN
Sbjct: 184 KCKQAGVDVLVAGSYFFGAEDKVACVKGLN 213
>gi|325567729|ref|ZP_08144340.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
gi|325158502|gb|EGC70649.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
Length = 217
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 128/200 (64%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 2 MKLAPSILSADFANLQRDIELVERHGADYIHVDVMDGHFVPNITLGPNIVKAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ + +I+ A+AG DII H E++PHI R+++ I A K + INP TPV+
Sbjct: 62 LDVHLMITEPEKYIHAFAEAGADIIGIHAEATPHIHRAIQMIVAENVKAEIVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+ D +L+MTVNPGFGGQ IE ++ KI AL ++ +EVDGG+
Sbjct: 122 AIEHVLSMCDQVLVMTVNPGFGGQSFIEESLEKIAALAALKEEKGYHYDIEVDGGIVPET 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
K ++AGA++ V GS ++
Sbjct: 182 AKRCLEAGANVFVAGSYIYD 201
>gi|223945381|gb|ACN26774.1| unknown [Zea mays]
Length = 246
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LG+++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 23 IIVSPSILSANFAKLGDQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 82
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 83 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTSTIHLHRTVNQIKSLGAKAGVVLNPATP 142
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++ ++D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGGV
Sbjct: 143 LNAIDYILDVVDLVLIMSVNPGFGGQSFIESQVRKIAELRRLCAEKGVNPWIEVDGGVGP 202
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ +V GS+ F G YA+ + +K S
Sbjct: 203 KNAYKVIEAGANAIVAGSAVF---GAPDYAEAIKGIKTS 238
>gi|190576139|ref|YP_001973984.1| ribulose-phosphate 3-epimerase [Stenotrophomonas maltophilia K279a]
gi|190014061|emb|CAQ47701.1| putative ribulose-phosphate 3-epimerase [Stenotrophomonas
maltophilia K279a]
Length = 224
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 137/201 (68%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILSANFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG I+FHPE+S H+ R+++ I ++G K G+ +NP TPV I
Sbjct: 66 DVHLMVEPVDRIIPDFAEAGATYISFHPEASRHVHRTIQLIRSLGCKPGIVLNPATPVDI 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D++L+M+VNPGFGGQ I S + K++ + +I + I LE+DGGV + NI
Sbjct: 126 LDWVLDDLDLVLLMSVNPGFGGQAFIPSALDKLKVVRKMIDASGKDIRLEIDGGVKADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ AGAD V GS+ FN K
Sbjct: 186 GEIAAAGADTFVAGSAIFNAK 206
>gi|228474977|ref|ZP_04059705.1| ribulose-phosphate 3-epimerase [Staphylococcus hominis SK119]
gi|228270962|gb|EEK12350.1| ribulose-phosphate 3-epimerase [Staphylococcus hominis SK119]
Length = 214
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 6/212 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L+ DF L +EI + KAG +HFDVMDG FVPNIS G ++ ++RS +
Sbjct: 3 HIFPSLLSVDFLNLKQEIQLLEKAGVDGLHFDVMDGQFVPNISIGLPILDAVRSTTQLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +++I A G D+I+ H ES+PHI R+++ I ++ KK GV INP TPV
Sbjct: 63 DVHLMIENPENYIETFAKHGADMISVHIESTPHIHRAIQLIKSLDKKAGVVINPGTPVDR 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL----EVDGGVTSR 181
+ V+ +D +L+MTVNPGFGGQ I+ KI+ L K S +L EVDGG+ +
Sbjct: 123 VVPVLSMVDYVLVMTVNPGFGGQTFIDMCASKIKLLNDL--KSSFNLNFDIEVDGGINDK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + GA+L V GS FFNQ + K L
Sbjct: 181 TIDICAKHGANLFVTGSYFFNQDDYKTVTKIL 212
>gi|160872679|ref|ZP_02062811.1| ribulose-phosphate 3-epimerase [Rickettsiella grylli]
gi|159121478|gb|EDP46816.1| ribulose-phosphate 3-epimerase [Rickettsiella grylli]
Length = 220
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 134/214 (62%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I S+L+AD L E S + +AGA Q+H DVMD FVPN++FG + R+LR + +VF
Sbjct: 6 ISASVLSADMGCLARESSAVLQAGADQLHIDVMDNHFVPNLTFGPLICRALRKHLPNVFL 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ +D+ I+ A AG + +TFHPE+S I ++L I +G K G+AINP+T + +
Sbjct: 66 DVHLMVNPVDALISAFAAAGANQMTFHPEASNDIVKNLNQIRRLGCKAGLAINPQTELTL 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
L + D +D +L+M+V+PGF Q I + KI AK L+ K S L VDGGV NI
Sbjct: 126 LNNYWDHLDFVLMMSVHPGFAEQPFIPEVLNKISTAKQLLSLHKPSARLGVDGGVKKNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +AGAD ++GS FN +Y+ LN+L+
Sbjct: 186 AEIAKAGADTFILGSGIFNTA---NYSNTLNELR 216
>gi|254995380|ref|ZP_05277570.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Mississippi]
gi|255003567|ref|ZP_05278531.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Puerto Rico]
gi|255004693|ref|ZP_05279494.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Virginia]
Length = 238
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 130/195 (66%), Gaps = 2/195 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SIL+ADF+ L ++ + AG +H DVMDGCFVPN++ G VI ++ + V D HL
Sbjct: 30 SILSADFANLSASVAAVEAAGVDWLHVDVMDGCFVPNLTVGPVVIAGIKKCTRLVLDVHL 89
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ + H+ + DAG DIIT H ES H+ R +R + + GKK GV++ P+T + LE V
Sbjct: 90 MVQTPALHLRSVIDAGADIITVHAESDVHLYRFVREVKSHGKKVGVSLVPKTHHSALEYV 149
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLV 187
I E+D++L+M+V+PGF GQ+ + S + KI + + ++ K S+ + VDGGVT+ N+ S+V
Sbjct: 150 IHELDLVLVMSVDPGFAGQEFLTSQLRKIEKIRTMVEKYSLPTKISVDGGVTTENVGSIV 209
Query: 188 QAGADLLVVGSSFFN 202
AGAD++VVG+S F
Sbjct: 210 NAGADVVVVGTSLFK 224
>gi|160940188|ref|ZP_02087533.1| hypothetical protein CLOBOL_05077 [Clostridium bolteae ATCC
BAA-613]
gi|158436768|gb|EDP14535.1| hypothetical protein CLOBOL_05077 [Clostridium bolteae ATCC
BAA-613]
Length = 214
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 126/205 (61%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI AD RL +EI + + +H D+MDG FV NI+FG + I +++ S +F
Sbjct: 3 QILPSIFGADILRLKDEIEFLERENTAILHVDMMDGNFVSNIAFGPNQIGAMKKASKMMF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+MI H++ + G ++I+ H ES+PHI ++ I G+K GV +NP TP ++
Sbjct: 63 DVHMMIDHPKDHLDDVIATGAEMISVHYESTPHIHNMIQRIKKAGRKAGVVLNPGTPESV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE ++D+ID +LIMT+NPG GQ IE ++ KI K +IG R I +EVDGGV K
Sbjct: 123 LEYLLDDIDYVLIMTINPGTPGQTFIEKSLEKIANLKKMIGSRPIQIEVDGGVNDVIAKQ 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYA 210
+ AGA+L+VVG F + Y+
Sbjct: 183 VAGAGAELIVVGGYLFGGNPDERYS 207
>gi|58384702|gb|AAW72717.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola (Cinara cedri)]
Length = 220
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I+PSIL+ADF LG E+ + +AG + IHFD+MD +VPN + G +++S+++ + VF
Sbjct: 6 IIPSILSADFCYLGNELHKLLRAGCQLIHFDLMDNHYVPNFTIGPMILKSVKNNNIPVFF 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D LM SS DS I + AD I+ HPE++ R++ I +G G+A+NP T +
Sbjct: 66 DVPLMASSGDSLIPLFADLNVKFISIHPETTNPFPRTIPLIKKIGCNVGLALNPSTSLNC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ +I+E+D+IL+M VNPGFGGQ ++++ KI+ + LI K+ +I L VDGGV NI
Sbjct: 126 LDYIINELDLILVMAVNPGFGGQVFLKNSFKKIKPIRYLINKKKSNILLSVDGGVNQSNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ +GAD LV+GS+ FN K + K ++
Sbjct: 186 LKIIDSGADYLVIGSAIFNFKNYLKTIKNFQNI 218
>gi|158522240|ref|YP_001530110.1| ribulose-phosphate 3-epimerase [Desulfococcus oleovorans Hxd3]
gi|158511066|gb|ABW68033.1| Ribulose-phosphate 3-epimerase [Desulfococcus oleovorans Hxd3]
Length = 219
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 144/216 (66%), Gaps = 5/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLG+E+ + AGA IH DVMDG +VPNI+ G V++++RS + D
Sbjct: 4 IAPSILSADFARLGDEVMAVEAAGADWIHVDVMDGRYVPNITIGPLVVKAVRSVTSLPVD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ AG D++ H E+S H+ R+++ I +G + GVA+NP TP+++L
Sbjct: 64 AHLMIMEPERYVAEFVQAGADLVAVHAEASVHLNRTIQLIKGLGARAGVALNPSTPLSVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ V+D++D+++IM+VNPGFGGQQ I +++ K+R K I +R ++ ++VDGGV + I+
Sbjct: 124 DWVLDDLDLVVIMSVNPGFGGQQFIPNSLDKVRALKQRITERGLATQIQVDGGVNEKTIR 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AG D+ V GS+ F G +Y + L+K A
Sbjct: 184 DVSAAGTDVFVAGSAVF---GSSNYKTTIATLRKLA 216
>gi|148360682|ref|YP_001251889.1| D-ribulose-5-phosphate-3-epimerase [Legionella pneumophila str.
Corby]
gi|296106253|ref|YP_003617953.1| ribulose-phosphate 3-epimerase [Legionella pneumophila 2300/99
Alcoy]
gi|148282455|gb|ABQ56543.1| D-ribulose-5-phosphate-3-epimerase [Legionella pneumophila str.
Corby]
gi|295648154|gb|ADG24001.1| ribulose-phosphate 3-epimerase [Legionella pneumophila 2300/99
Alcoy]
Length = 217
Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 138/221 (62%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSD 62
+ QI+PS+L+AD +RLGEE+ + KAGA IHFDVMD +VPN++FG +L + + +
Sbjct: 2 TFQILPSLLSADMTRLGEEVDAVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIKKFPN 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + +D+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP T
Sbjct: 62 LPIDVHLMTTPVDTLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L + +L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +N
Sbjct: 122 IDTLTWCAHNLKFVLVMTVNPGFGGQKLIPEVIPKLSKIRQ--QHPNLDLCVDGGVTPQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I SL AGA+ V GS+ FN +Y++ + +++ +I
Sbjct: 180 IASLAHAGANQFVAGSAIFNSS---NYSETIKHMREQLASI 217
>gi|300814535|ref|ZP_07094791.1| ribulose-phosphate 3-epimerase [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511362|gb|EFK38606.1| ribulose-phosphate 3-epimerase [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 214
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 138/214 (64%), Gaps = 9/214 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ + E+ + + IH D+MDG +VPNISFG +++ LR+ +D FD
Sbjct: 2 LAPSILSADFTNIREDFKIMNEEKCDFIHVDIMDGNYVPNISFGPGIVKQLRTLTDIKFD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++I A +G DIIT HP ++ H+ R+L I + G K G+A+NP + L
Sbjct: 62 THLMIENPENYIKDFAQSGSDIITIHPSTTKHLDRTLNLIKSYGLKCGIALNPSDDLTCL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ ++ ++ ++LIM+VNPGFGGQ IE+++ KI+ + +I S +EVDGGV N +
Sbjct: 122 KYILKDLYLVLIMSVNPGFGGQSFIENSLLKIKDLRNIIKDNSYDTLIEVDGGVKIDNAQ 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ AGAD+LV GS F KG+I N++KK
Sbjct: 182 KILDAGADILVSGSGVF--KGDIR-----NNIKK 208
>gi|56417213|ref|YP_154287.1| ribulose-phosphate 3-epimerase [Anaplasma marginale str. St.
Maries]
gi|222475577|ref|YP_002563994.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Florida]
gi|56388445|gb|AAV87032.1| ribulose-phosphate 3-epimerase [Anaplasma marginale str. St.
Maries]
gi|222419715|gb|ACM49738.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Florida]
Length = 260
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 130/195 (66%), Gaps = 2/195 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SIL+ADF+ L ++ + AG +H DVMDGCFVPN++ G VI ++ + V D HL
Sbjct: 52 SILSADFANLSASVAAVEAAGVDWLHVDVMDGCFVPNLTVGPVVIAGIKKCTRLVLDVHL 111
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ + H+ + DAG DIIT H ES H+ R +R + + GKK GV++ P+T + LE V
Sbjct: 112 MVQTPALHLRSVIDAGADIITVHAESDVHLYRFVREVKSHGKKVGVSLVPKTHHSALEYV 171
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLV 187
I E+D++L+M+V+PGF GQ+ + S + KI + + ++ K S+ + VDGGVT+ N+ S+V
Sbjct: 172 IHELDLVLVMSVDPGFAGQEFLTSQLRKIEKIRTMVEKYSLPTKISVDGGVTTENVGSIV 231
Query: 188 QAGADLLVVGSSFFN 202
AGAD++VVG+S F
Sbjct: 232 NAGADVVVVGTSLFK 246
>gi|332638221|ref|ZP_08417084.1| ribulose-phosphate 3-epimerase [Weissella cibaria KACC 11862]
Length = 219
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 134/215 (62%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+AD+ L ++I I AGA+ +H DVMDG FVP+IS+G +++LR ++
Sbjct: 2 TIKVAPSILSADYINLQKDIELIEAAGAEFVHIDVMDGMFVPSISYGPAWVKALRPVTNM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLM+ + +I++ A+AG DII H E++PHI R+L+ I G K V INP T V
Sbjct: 62 VLDVHLMVEQPERYIDVFAEAGSDIIGVHYEATPHIHRALQQIKNHGIKAEVVINPGTSV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
A +E V+ +D +L+MTVNPGFGGQ+ + T+ KI + + ++ +E+DGG
Sbjct: 122 AAIEPVLHMVDQVLVMTVNPGFGGQKFLPETLEKIARLAEIKREKGYDFDIEIDGGANDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K +AGA + V GS F++ + RL ++
Sbjct: 182 TTKLAYEAGATVAVAGSYVFDKVDPAAKIARLKEV 216
>gi|293402256|ref|ZP_06646394.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304363|gb|EFE45614.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 221
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 132/208 (63%), Gaps = 5/208 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ D++R+ E+++++ K A+ +HFDVMDG FVPN++FG D+++ +
Sbjct: 1 MKQKLVIAPSVLSLDYARVSEQLADLNKTRAEWMHFDVMDGHFVPNLTFGPDILKGFKKA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAI 117
D V D H+M+S + I AG DI+TFH E+ I+ + RTI ++G K GV++
Sbjct: 61 VDMVMDVHIMVSDPKFYAPIFIKAGADIVTFHYEAVASIKECVALCRTIRSLGAKVGVSV 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVD 175
P+TP+ + + E+D+ LIM+V PGFGGQ +E + K+R+ ++ I ++ +E+D
Sbjct: 121 RPKTPIDEILPYLHEMDVFLIMSVEPGFGGQSFMEDQLDKVRKLRSYIDAHELNVRIEID 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GG+ ++ K ++AG D LV GS F Q
Sbjct: 181 GGINAKTAKQAIEAGCDTLVAGSYVFKQ 208
>gi|224035937|gb|ACN37044.1| unknown [Zea mays]
Length = 274
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 140/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LG+++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 51 IIVSPSILSANFAKLGDQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 110
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 111 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTSTIHLHRTVNQIKSLGAKAGVVLNPATP 170
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++ ++D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGGV
Sbjct: 171 LNAIDYILDVVDLVLIMSVNPGFGGQSFIESQVRKIAELRRLCAEKGVNPWIEVDGGVGP 230
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ +V GS+ F G YA+ + +K S
Sbjct: 231 KNAYKVIEAGANAIVAGSAVF---GAPDYAEAIKGIKTS 266
>gi|73662859|ref|YP_301640.1| ribulose-phosphate 3-epimerase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495374|dbj|BAE18695.1| putative ribulose-phosphate 3-epimerase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 214
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 129/214 (60%), Gaps = 5/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ADF L +E++ + KAG +HFDVMDG FVPNIS G ++ S+R +D
Sbjct: 3 KLYPSLLSADFLNLQQELTALEKAGVDGVHFDVMDGQFVPNISIGLPILDSVRKGTDLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ + A+ G D+I+ H E++PHI R + I K GV INP TPV
Sbjct: 63 DVHLMIEEPEKYVELFAEHGADMISVHVEATPHIHRVIEQIKNKNVKAGVVINPGTPVDS 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ V+ +D +L+MTVNPGFGGQ I + K+ Q + + ++ +EVDGG+ + +
Sbjct: 123 IRPVLKMVDYVLVMTVNPGFGGQTFINDCVEKLDQLSEIKKAQGLNFDIEVDGGINNNTV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+++V GA +LV GS FF Y N LK
Sbjct: 183 ETVVNHGATMLVAGSYFFKHD---DYQTVTNTLK 213
>gi|255038853|ref|YP_003089474.1| ribulose-phosphate 3-epimerase [Dyadobacter fermentans DSM 18053]
gi|254951609|gb|ACT96309.1| ribulose-phosphate 3-epimerase [Dyadobacter fermentans DSM 18053]
Length = 215
Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 6/200 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAADF+ L ++ I + A IH D+MDG FVPNISFG V ++ ++
Sbjct: 3 EIAPSILAADFANLQRDVEMINNSSAGYIHVDIMDGMFVPNISFGLPVCEAIHRHAKKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D ++ +AG IT H E+ PH+ R+++ I +G + GVA+NP TPV +
Sbjct: 63 DVHLMIEQPDRYLEAFRNAGASGITVHYEACPHLHRTIQHIKELGAEPGVALNPHTPVEV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI----RQAKALIGKRSISLEVDGGVTSR 181
L +++ ++ +ILIM+VNPGFGGQ+ IE+T KI R K + +EVDGGV
Sbjct: 123 LSEIMGDVSLILIMSVNPGFGGQKFIENTYKKIATLDRYRKEF--GYNFKIEVDGGVNLN 180
Query: 182 NIKSLVQAGADLLVVGSSFF 201
N LV+ G D+LV GS F
Sbjct: 181 NAPRLVREGVDILVAGSFVF 200
>gi|304316967|ref|YP_003852112.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778469|gb|ADL69028.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 217
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 126/199 (63%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF L +I K + +H DVMDG FVPNI+ G VI++L+ ++
Sbjct: 1 MEISPSILSADFGNLLSDIKKAEKEKPEFLHIDVMDGHFVPNITIGPLVIKALKGKTNIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I A+AG IT H E+ H+ R+L+ I +MG VA+NP TP+
Sbjct: 61 FDVHLMIEDADKYIKEFAEAGAKNITVHQEACLHLDRTLQFIKSMGIMASVALNPATPLE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ V+ +DM+LIMTVNPGFGGQ IE KIR+ + R ++ +EVDGG+ N
Sbjct: 121 TLKYVLPSVDMVLIMTVNPGFGGQVFIEEMYEKIRELAYIRESRGLNFKIEVDGGINVDN 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I +V AGAD++V GSS F
Sbjct: 181 INDVVFAGADVIVAGSSIF 199
>gi|224503695|ref|ZP_03672002.1| hypothetical protein LmonFR_14549 [Listeria monocytogenes FSL
R2-561]
gi|255028235|ref|ZP_05300186.1| hypothetical protein LmonL_01439 [Listeria monocytogenes LO28]
gi|284800455|ref|YP_003412320.1| hypothetical protein LM5578_0201 [Listeria monocytogenes 08-5578]
gi|284993641|ref|YP_003415409.1| hypothetical protein LM5923_0201 [Listeria monocytogenes 08-5923]
gi|284056017|gb|ADB66958.1| hypothetical protein LM5578_0201 [Listeria monocytogenes 08-5578]
gi|284059108|gb|ADB70047.1| hypothetical protein LM5923_0201 [Listeria monocytogenes 08-5923]
Length = 214
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 129/214 (60%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R + S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDNWRRENHGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
QAG D+LV GS FF G A + LKK
Sbjct: 184 KCKQAGVDILVAGSYFF---GATDKAACIQGLKK 214
>gi|258515516|ref|YP_003191738.1| ribulose-phosphate 3-epimerase [Desulfotomaculum acetoxidans DSM
771]
gi|257779221|gb|ACV63115.1| ribulose-phosphate 3-epimerase [Desulfotomaculum acetoxidans DSM
771]
Length = 231
Score = 174 bits (441), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 136/220 (61%), Gaps = 5/220 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS L E++ + AG +H DVMDG FVPNI+ G +++LR +S
Sbjct: 2 IKIAPSILSADFSMLKEDVQRVEAAGVDWLHIDVMDGHFVPNITMGPVAVQALRPHSKLF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + I+ AG D+IT H E+ H+ R+L I G K GVA+NP T
Sbjct: 62 FDVHLMIEKPEQFIDQFVRAGADLITVHAEACTHLHRTLALIKEKGIKAGVALNPSTHQD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V+ +D++L+MTVNPGFGGQ I I KI++ K ++ ++++ ++VDGG+ +
Sbjct: 122 TIEYVLSMVDLVLLMTVNPGFGGQAFIPEIIGKIKKVKTMLEHQNVNSEIQVDGGINIKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGA +LV GS+ F G A + +++K+A A
Sbjct: 182 APLVARAGATVLVAGSAIF---GAQDPAVAVEEIRKAAKA 218
>gi|253570299|ref|ZP_04847708.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 1_1_6]
gi|251840680|gb|EES68762.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 1_1_6]
Length = 216
Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++ I ++ A+ +H D+MDG FVPNISFG V++ + +D D
Sbjct: 5 ISPSILSADFGYLARDLEMINRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLTDKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ H+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHTMNVHYEACTHLHRVIQQIKEAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIQDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F ++L+ L
Sbjct: 184 ARLVEAGADVLVAGNAVFGAPDPEEMIRQLHKL 216
>gi|153815681|ref|ZP_01968349.1| hypothetical protein RUMTOR_01917 [Ruminococcus torques ATCC 27756]
gi|331088254|ref|ZP_08337173.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846922|gb|EDK23840.1| hypothetical protein RUMTOR_01917 [Ruminococcus torques ATCC 27756]
gi|330408498|gb|EGG87964.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
3_1_46FAA]
Length = 220
Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 133/215 (61%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LGE+I KAGAK IHFDVMDG FVP+ISFG V+ +L+ D
Sbjct: 5 LAPSILSADFKILGEQIEQTEKAGAKYIHFDVMDGIFVPSISFGMPVLSALKGAVKQALD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ ++ A G DIIT H E+ ++ ++ I A G K G+ I P TPV L
Sbjct: 65 VHLMVTEPIRYVKEFAKCGADIITVHLEACEDVKATVDEIKASGVKAGITIKPATPVKEL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++ DM LIM+V PGFGGQ I ++ KI++ + L+ +R + +EVDGG+ N++
Sbjct: 125 IPYLELADMFLIMSVEPGFGGQAFIPESLDKIKELRTLLDERGLKTDIEVDGGIYCENVE 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISY-AKRLNDLKK 218
+++ AGA+++V GS F KG I+ KR ++ K
Sbjct: 185 AVLDAGANIIVSGSGVF--KGNITENTKRFMEILK 217
>gi|317501932|ref|ZP_07960116.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
8_1_57FAA]
gi|316896612|gb|EFV18699.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
8_1_57FAA]
Length = 220
Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 133/215 (61%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LGE+I KAGAK IHFDVMDG FVP+ISFG V+ +L+ D
Sbjct: 5 LAPSILSADFKILGEQIEQTEKAGAKYIHFDVMDGIFVPSISFGMPVLSALKGAVKQALD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ ++ A G DIIT H E+ ++ ++ I A G K G+ I P TPV L
Sbjct: 65 VHLMVTEPIRYVKEFAKCGADIITVHLEACEDVKATVDEIKASGVKAGITIKPATPVKEL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++ DM LIM+V PGFGGQ I ++ KI++ + L+ +R + +EVDGG+ N++
Sbjct: 125 IPYLELADMFLIMSVEPGFGGQAFIPESLDKIKELRTLLDERGLKADIEVDGGIYCENVE 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISY-AKRLNDLKK 218
+++ AGA+++V GS F KG I+ KR ++ K
Sbjct: 185 AVLDAGANIIVSGSGVF--KGNITENTKRFMEILK 217
>gi|315651140|ref|ZP_07904172.1| ribulose-phosphate 3-epimerase [Eubacterium saburreum DSM 3986]
gi|315486605|gb|EFU76955.1| ribulose-phosphate 3-epimerase [Eubacterium saburreum DSM 3986]
Length = 219
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 132/204 (64%), Gaps = 4/204 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+LAA+F L ++ + + + +H DVMDG FVP+ISFG VI SLR D F
Sbjct: 4 NIAPSLLAANFFDLSSQMKLLKEGNIEILHLDVMDGMFVPSISFGMPVISSLRKSVDFFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + +I +G + IT H E+ HI R + I + G ++G+AINP TPV+
Sbjct: 64 DVHMMVENPERYIEDFYKSGANGITIHFEACKHIDRCISLIKSFGLRSGIAINPATPVSF 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L ++I E+DM+LIM+VNPGFGGQ+ I ++ K+R+ + +++ +L +VDGG+ + NI
Sbjct: 124 LHNIITEVDMVLIMSVNPGFGGQKFIPYSLDKVRELHKIKTEKNKNLIIQVDGGIGTENI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEI 207
K+L AG D V GSS F KG+I
Sbjct: 184 KALSDAGVDEFVAGSSIF--KGDI 205
>gi|227530544|ref|ZP_03960593.1| ribulose-phosphate 3-epimerase [Lactobacillus vaginalis ATCC 49540]
gi|227349550|gb|EEJ39841.1| ribulose-phosphate 3-epimerase [Lactobacillus vaginalis ATCC 49540]
Length = 217
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 133/217 (61%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L +I + KAGA+ +H DVMDG FVP+IS+G ++++R + V
Sbjct: 2 IKVAPSILSADYVNLQRDIEKVDKAGAEYLHIDVMDGSFVPSISYGPGFVKAIRPITKMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+ + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 62 LDCHLMVQNPEHILPAFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q + + +EVDGGV ++
Sbjct: 122 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVEKIAQLNQIKKNKGYDFDIEVDGGVNNQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGA + V GS +N AKR+ L+ +
Sbjct: 182 VVDCYKAGATVAVAGSYVYNVDDP---AKRIQALRDA 215
>gi|182416253|ref|YP_001821319.1| ribulose-phosphate 3-epimerase [Opitutus terrae PB90-1]
gi|177843467|gb|ACB77719.1| Ribulose-phosphate 3-epimerase [Opitutus terrae PB90-1]
Length = 230
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 134/216 (62%), Gaps = 7/216 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADFSRL EE+ + ++GA +H D+MDG FVPNISFG V++++R+++ FD
Sbjct: 6 VAPSLLAADFSRLREEVQRVEQSGADWLHLDIMDGHFVPNISFGPAVVKAVRAHTRLPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAINPETPV 123
LMI + +I AG D IT H E+ S +R+ LR I G K G+A+NPETP+
Sbjct: 66 VQLMIGNPAEYIGAFVQAGADRITVHVETDGGSDRVRQLLREIRERGCKAGLALNPETPL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA---KALIGKRSISLEVDGGVTS 180
+E + EID++L+MTV+PGFGGQ I T+ K+ A +A G R +E+DGG+T
Sbjct: 126 EQVEPFLAEIDLLLVMTVHPGFGGQSFIPETVEKMEAAYVRRAACGLR-FRIEIDGGITP 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + AGAD+LV G+ F + + L DL
Sbjct: 185 ETAAAGLLAGADVLVAGTWLFQSRDMAVAIRELRDL 220
>gi|228469707|ref|ZP_04054675.1| ribulose-phosphate 3-epimerase [Porphyromonas uenonis 60-3]
gi|228308726|gb|EEK17452.1| ribulose-phosphate 3-epimerase [Porphyromonas uenonis 60-3]
Length = 215
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L+ADF L +EI+ I ++ +H DVMDG FVPN+SFG +I ++R D H
Sbjct: 6 PSLLSADFLHLADEITMINESQCDWLHIDVMDGVFVPNLSFGFPIIEAIRPICQKPLDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI I+ A G I+ H E PH+ R+LR I G + V +NP TPV +L D
Sbjct: 66 LMIVEPWKFIDQFAKLGIHIMNVHYEVCPHLHRTLRAIREAGMRPAVTLNPHTPVELLTD 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
++ E DM+L+M+VNPG+GGQ+ IE ++ K+ + + +I ++ +S ++VDGGV + L
Sbjct: 126 ILCEADMVLLMSVNPGYGGQKFIEHSVRKVERLRKMIQEQGLSTLIQVDGGVNLETGRQL 185
Query: 187 VQAGADLLVVGSSFFN 202
V+AGAD LV GS+ F
Sbjct: 186 VEAGADSLVAGSAVFK 201
>gi|212550551|ref|YP_002308868.1| ribulose-phosphate 3-epimerase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548789|dbj|BAG83457.1| ribulose-phosphate 3-epimerase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 216
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 131/215 (60%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S + PS+L+A+F L EEI + + A ++H D+MDG FVPNIS G ++ L S
Sbjct: 2 SFILAPSLLSANFLHLEEEIEILNGSMADRLHLDIMDGVFVPNISIGLQQVKHLSRISFK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI I + D G +T H E+ H+ + + I G K GVA+NP TP+
Sbjct: 62 PLDAHLMIVEPQKFIGLFRDFGIQTLTIHYETCTHLHKIIMQIKENGMKVGVALNPHTPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+L DV++E+D +LI++VNPGFGGQ+ I ++ K+ + K LI K+ + S+EVDGG+ +
Sbjct: 122 EVLTDVLEELDRVLILSVNPGFGGQKFIPNSYSKVSRLKNLINKKELNTSIEVDGGIDIK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K +++AGA++LVVGS F K I K++ L
Sbjct: 182 TGKMMLEAGANILVVGSFIFEAKNPIEMIKQMKGL 216
>gi|332300861|ref|YP_004442782.1| ribulose-phosphate 3-epimerase [Porphyromonas asaccharolytica DSM
20707]
gi|332177924|gb|AEE13614.1| ribulose-phosphate 3-epimerase [Porphyromonas asaccharolytica DSM
20707]
Length = 215
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L+ADF L +EI+ I ++ +H DVMDG FVPN+SFG +I ++R D H
Sbjct: 6 PSLLSADFLHLADEITMINESQCDWLHIDVMDGVFVPNLSFGFPIIEAIRPICQKPLDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI I+ A G I+ H E PH+ R+LR I G + V +NP TPV +L D
Sbjct: 66 LMIVEPWKFIDQFAKLGIYIMNVHYEVCPHLHRTLRAIREAGMRPAVTLNPHTPVELLTD 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
++ E DM+L+M+VNPG+GGQ+ IE +I K+ + + +I ++ +S ++VDGGV + L
Sbjct: 126 ILCEADMVLLMSVNPGYGGQKFIEQSIRKVERLRKMIQEQGLSTLIQVDGGVNLETGRQL 185
Query: 187 VQAGADLLVVGSSFFN 202
++AGAD LV GS+ F
Sbjct: 186 IEAGADSLVAGSAVFK 201
>gi|310825643|ref|YP_003958000.1| ribulose-phosphate 3-epimerase [Eubacterium limosum KIST612]
gi|308737377|gb|ADO35037.1| ribulose-phosphate 3-epimerase [Eubacterium limosum KIST612]
Length = 229
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 132/215 (61%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF+ L ++ ++ GA +H DVMDG FVPNI+ G D ++ LR F
Sbjct: 14 KISPSMLSADFANLDRDLKSVEAGGADWLHVDVMDGHFVPNITIGPDQVKCLRKTIGLPF 73
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMIS +I ADAG DIIT H E + + I G K + I+P+TP+ +
Sbjct: 74 DVHLMISEPLKYIERFADAGADIITVHVEVEDDTQECIDLIKKSGCKASLVISPDTPIDV 133
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L ID+I MIL+M V PGFGGQ+ I T +++ +A+IG R + LE+DGGV + +
Sbjct: 134 LAPFIDDISMILVMGVYPGFGGQKYIPETTERLKGIRAMIGGRDVDLEIDGGVNFETLST 193
Query: 186 LVQAGADLLVVGSSFF--NQKGEISYAKRLNDLKK 218
+V+AGA+++V GS F + K IS+ +++ D K
Sbjct: 194 VVEAGANVIVSGSCLFSGDMKENISHFRKIMDGAK 228
>gi|325295095|ref|YP_004281609.1| ribulose-phosphate 3-epimerase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065543|gb|ADY73550.1| ribulose-phosphate 3-epimerase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 222
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 130/198 (65%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+A+F+ L +I + GA +H DVMDG FVPNI+ G V+ S++ + D
Sbjct: 4 LAPSILSANFANLERDIKEVELGGADLLHIDVMDGRFVPNITIGIPVVESIKDVTKLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I A AG D I+FH E++ H R + I + KK G+ INP TPV +L
Sbjct: 64 VHLMIVEPEKYILDFAKAGADWISFHFEAAVHHHRIVSMIKELDKKAGIVINPSTPVFLL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
E+++ +D +L+M+VNPGFGGQ+ IE+++ KI++ K + ++ + +EVDGG+ N++
Sbjct: 124 EEILPFVDFVLVMSVNPGFGGQKFIETSVEKIKKLKRICEEKGLEVKIEVDGGIKIDNVQ 183
Query: 185 SLVQAGADLLVVGSSFFN 202
++QAGA ++V GS+ FN
Sbjct: 184 RVLQAGASIVVAGSAVFN 201
>gi|299148263|ref|ZP_07041325.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_23]
gi|298513024|gb|EFI36911.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_23]
Length = 216
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 IAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G + H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFILEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+R+ +ALI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGA+ LV G++ F + +L++L
Sbjct: 184 ARLVEAGANALVAGNAVFAAPDPEAMISQLHEL 216
>gi|184200813|ref|YP_001855020.1| ribulose-phosphate 3-epimerase [Kocuria rhizophila DC2201]
gi|183581043|dbj|BAG29514.1| ribulose-5-phosphate 3-epimerase [Kocuria rhizophila DC2201]
Length = 221
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRLGEE+ I+ A A H DVMD FVPN++ G V+ L++ S D
Sbjct: 6 IHPSILSADFSRLGEELQRISTADAA--HVDVMDNHFVPNLTLGLPVVERLQAVSPVPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AGC +TFH E++ + R + A G K G+A+ P TPV
Sbjct: 64 LHLMIEDPDRWAPAYAEAGCASVTFHAEAAAAPVKLARELRAAGAKAGLAVRPATPVEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
D++ E+DM+L+MTV PGFGGQ+ ++ T+PK+R+A + +++L+VDGG+T I
Sbjct: 124 LDLLPELDMLLVMTVEPGFGGQKFLDVTLPKLRRAAQAVRAHGGTVALQVDGGITEETIV 183
Query: 185 SLVQAGADLLVVGSSFFNQK 204
+AGAD V GS+ + +
Sbjct: 184 RAAEAGADTFVAGSAVYGAE 203
>gi|261415931|ref|YP_003249614.1| ribulose-phosphate 3-epimerase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372387|gb|ACX75132.1| ribulose-phosphate 3-epimerase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325653|gb|ADL24854.1| ribulose-phosphate 3-epimerase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 216
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 127/197 (64%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L A+F LG + I GA +H D+MDG FVPNISFG + ++ + D
Sbjct: 6 IAPSVLNANFLELGNGLKAIENGGAGLVHLDIMDGHFVPNISFGPGISACVKKGTKLPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + ++++ A AG II+ H E++ H+ R L I +G K VAINP TP+ +
Sbjct: 66 CHLMIENPENYVGEFAKAGASIISVHAETTNHLDRLLHQIAELGVKPAVAINPATPLESI 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ V+D +DM+LIM+VNPGFGGQ LI + KIR+ +AL K +++++DGGV NI +
Sbjct: 126 KYVLDIVDMVLIMSVNPGFGGQSLIPYCLDKIRELRAL--KPELNIQIDGGVKLDNILAC 183
Query: 187 VQAGADLLVVGSSFFNQ 203
+AGA++ VVGS+ F +
Sbjct: 184 KEAGANIFVVGSAIFGK 200
>gi|326803894|ref|YP_004321712.1| ribulose-phosphate 3-epimerase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651302|gb|AEA01485.1| ribulose-phosphate 3-epimerase [Aerococcus urinae ACS-120-V-Col10a]
Length = 215
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 12/212 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL AD R+ EE+ I +AGA +H D+MDG FVPN++FGA ++ +LR ++
Sbjct: 1 MKIAPSILNADTGRMREEVVRIEEAGADWVHVDIMDGHFVPNLTFGAPMVEALRPHTKLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCH+M+ + D +I +A AG D +T H E+ H+ R+++ I + G K VA+NP TPVA
Sbjct: 61 IDCHMMVDNPDDYIESLAQAGADSMTVHFEAVTHLHRTIQNIQSQGMKAAVALNPATPVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK------IRQAKALIGKRSISLEVDGGV 178
+ +++ +DM+L+MTVNPGFGGQ I + K IRQ K ++VDGG+
Sbjct: 121 AITPILNMVDMVLVMTVNPGFGGQAFIPDMVEKMTELDQIRQEKGY----HYQIQVDGGI 176
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ I+ G D+ V GS + KG+ + A
Sbjct: 177 DNTTIRQCYDQGVDVFVSGSYVY--KGDSNQA 206
>gi|290961868|ref|YP_003493050.1| ribulose-phosphate 3-epimerase [Streptomyces scabiei 87.22]
gi|260651394|emb|CBG74516.1| ribulose-phosphate 3-epimerase [Streptomyces scabiei 87.22]
Length = 228
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 125/203 (61%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL + +
Sbjct: 2 AAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATQT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALRPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPFEDLLPELDMVLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLDLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
++ +AGAD+ V GS+ + +
Sbjct: 180 TVERCAEAGADIFVAGSAVYGAE 202
>gi|315283908|ref|ZP_07871937.1| ribulose-phosphate 3-epimerase [Listeria marthii FSL S4-120]
gi|313612448|gb|EFR86561.1| ribulose-phosphate 3-epimerase [Listeria marthii FSL S4-120]
Length = 214
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 122/197 (61%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAENAGADYLHIDVMDGHFVPNLTFGIDMVEQISKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PH+ R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHVHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ IEST +R + S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIESTTKNMRYLDNWRRENHGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFF 201
QAG D+LV GS FF
Sbjct: 184 KCKQAGVDVLVAGSYFF 200
>gi|149198077|ref|ZP_01875124.1| ribulose-phosphate 3-epimerase [Lentisphaera araneosa HTCC2155]
gi|149138679|gb|EDM27085.1| ribulose-phosphate 3-epimerase [Lentisphaera araneosa HTCC2155]
Length = 220
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 125/203 (61%), Gaps = 8/203 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PSILAADF+ L E+S +AGA+ IH DVMDG FVPNISFG VI LR++S++
Sbjct: 10 EIIVSPSILAADFANLAPEVSGAHEAGAQFIHLDVMDGHFVPNISFGPGVIGKLRAHSEA 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMIS +I A AGCD +TFH ES + + IH+ G G+ + P T +
Sbjct: 70 LFDAHLMISHPQKYIEEFAQAGCDHVTFHIESDCDTQEVIDQIHSYGMSAGLTLKPGTDI 129
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK---IRQAKALIGKRSISLEVDGGVTS 180
L +D+I+M+LIMTV PGFGGQ + + + IR+A + ++VDGGV
Sbjct: 130 ETLLPFVDKIEMVLIMTVEPGFGGQSFMHDMVERITIIREANP-----KLHIQVDGGVNK 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
K + AGA++LV G++FF
Sbjct: 185 ETSKIVRDAGANVLVAGTAFFRH 207
>gi|255647180|gb|ACU24058.1| unknown [Glycine max]
Length = 280
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 136/219 (62%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 57 IIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 116
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
HLMI + + AG DI++ H E S H+ R++ + ++G K GV +NP TP
Sbjct: 117 LGVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTP 176
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E ++D +D++LIM+VNPGFGGQ IES + KI + L ++ ++ +EVDGGV
Sbjct: 177 LSAIEYILDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGP 236
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV G + F K YA+ + +K S
Sbjct: 237 ANAYKVIEAGANALVAGFAVFGAK---DYAETIRGIKTS 272
>gi|295101232|emb|CBK98777.1| ribulose-5-phosphate 3-epimerase [Faecalibacterium prausnitzii
L2-6]
Length = 216
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 124/197 (62%), Gaps = 3/197 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVFDC 67
PSIL+ADFS LG + + AGA+ +H+DVMDG FVPNISFG V++SL ++ D+ +D
Sbjct: 6 PSILSADFSHLGADCRMVLDAGAQMLHYDVMDGHFVPNISFGVPVLKSLHKALPDAFYDV 65
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLMI+ + A AG ++ FH E I+ ++ I A G K G+ I P TPV L
Sbjct: 66 HLMITHPQQYAEAFAKAGASLLNFHLECDDDIQETIDAIKAQGCKVGMTIKPGTPVEELG 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKS 185
+D++D++L+M+V PGFGGQ+ + S + K+R KA +R + LEVDGGV +
Sbjct: 126 YYLDQLDLVLVMSVEPGFGGQKFMPSALDKLRWLKAEKDRRGLKFLLEVDGGVDAATAPQ 185
Query: 186 LVQAGADLLVVGSSFFN 202
V AGAD+LV GS+ F
Sbjct: 186 CVAAGADVLVAGSAIFG 202
>gi|312127899|ref|YP_003992773.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor hydrothermalis
108]
gi|311777918|gb|ADQ07404.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor hydrothermalis
108]
Length = 221
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 128/206 (62%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL++DF+ L E+ + A A +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 3 IKIAPSILSSDFADLKNELKKLELAKADLVHIDVMDGNFVDNITIGAPVVSSLRKNSTLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TPV
Sbjct: 63 FDVHLMVLHPEKHIEKFVQSGADNITVHAEATYHLDALISKIKSFGKKASVALNPATPVY 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E+V+ +DM+L+MTVNPG+GGQ+ I T+ KI L K +S +EVDGG+
Sbjct: 123 MIENVLGIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGLSFEIEVDGGINEET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
I V AGA+++V GS F+ G++S
Sbjct: 183 IVDCVNAGANVIVAGSYVFDS-GDVS 207
>gi|328881109|emb|CCA54348.1| Ribulose-phosphate 3-epimerase [Streptomyces venezuelae ATCC 10712]
Length = 227
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G ++ SL +D+
Sbjct: 3 QINPSILSADFARLADEAKAVD--GADWLHVDVMDNHFVPNLTLGVPIVESLARATDTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEDPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVAESTI 180
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGAD+ V GS+ +
Sbjct: 181 ERCAEAGADVFVAGSAVYG 199
>gi|256392291|ref|YP_003113855.1| ribulose-phosphate 3-epimerase [Catenulispora acidiphila DSM 44928]
gi|256358517|gb|ACU72014.1| ribulose-phosphate 3-epimerase [Catenulispora acidiphila DSM 44928]
Length = 231
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 128/203 (63%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+QI PSIL+ADF+RL +E+ + A IH DVMD FVPN++ G V+ +L S
Sbjct: 10 SVQISPSILSADFARLADEVGAVPSA--DWIHVDVMDNHFVPNLTLGLPVVEALVKASPR 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI+ D A+ G +TFH E++ R R++ + G + G+A+ P TP+
Sbjct: 68 PLDCHLMIADPDRWAPGYAEVGAGSVTFHVEAARAPIRLARSLRSAGARAGMALKPATPI 127
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
ED++ E+DM+L+MTV PGFGGQ+ ++ +PKIR+ + +I + S+ L++DGGV +
Sbjct: 128 EPYEDLLGELDMVLLMTVEPGFGGQKFLDVVLPKIRRTRQMINRHGGSVWLQIDGGVAAD 187
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
I+ +AGAD+ V GS+ + +
Sbjct: 188 TIERCAEAGADVFVAGSAVYGAE 210
>gi|54293648|ref|YP_126063.1| ribulose-phosphate 3-epimerase [Legionella pneumophila str. Lens]
gi|53753480|emb|CAH14935.1| ribulose-phosphate 3-epimerase [Legionella pneumophila str. Lens]
Length = 217
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 138/221 (62%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSD 62
+ QI+PS+L+AD +RLGEE+ + KAG+ IHFDVMD +VPN++FG +L + + +
Sbjct: 2 TFQILPSLLSADMTRLGEEVDAVMKAGSDFIHFDVMDNHYVPNLTFGPAFCDALIKKFPN 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + +D+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP T
Sbjct: 62 LPIDVHLMTTPVDTLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L + +L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +N
Sbjct: 122 IDTLTWCAHNLKFVLVMTVNPGFGGQKLIPEVIPKLSKIRQ--QHPNLDLCVDGGVTPQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I SL AGA+ V GS+ FN +Y++ + +++ +I
Sbjct: 180 IASLAHAGANQFVAGSAIFNSS---NYSETIKHMREQLASI 217
>gi|153855362|ref|ZP_01996511.1| hypothetical protein DORLON_02525 [Dorea longicatena DSM 13814]
gi|149752182|gb|EDM62113.1| hypothetical protein DORLON_02525 [Dorea longicatena DSM 13814]
Length = 221
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF LG+E+ GA+ IHFDVMDG FVP+ISFG V+ S+ ++ D
Sbjct: 6 LAPSILAADFKVLGQEMKKTEDNGAEYIHFDVMDGMFVPSISFGMPVMASIHDATEQFMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ AG D +T H E+ ++ +L I G K G++INPET V +
Sbjct: 66 AHLMVQEPIRYVEAFQKAGADSVTVHVEACEDVKATLNKIRECGMKVGLSINPETDVKEV 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++E+DMIL+M V+PGFGGQ+ I ++ KIR +A++ ++++ ++VDGGV N++
Sbjct: 126 VPYLEEVDMILVMCVHPGFGGQKFIPESLDKIRAIRAMLNEKNLETDIQVDGGVYVENVR 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGA+++V GS+ F + AK + LK
Sbjct: 186 EVLDAGANVIVSGSAVFRGDAGENTAKFMEILK 218
>gi|83589765|ref|YP_429774.1| ribulose-5-phosphate 3-epimerase [Moorella thermoacetica ATCC
39073]
gi|83572679|gb|ABC19231.1| ribulose-5-phosphate 3-epimerase [Moorella thermoacetica ATCC
39073]
Length = 223
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 136/219 (62%), Gaps = 8/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L E+ + + GA +H D+MDG FVPN++ G V+ +LR +S VFD
Sbjct: 4 IAPSLLAADFANLQGEVEAVARGGADWLHLDIMDGHFVPNLTIGPAVVAALRPHSQLVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S + I A AG D I+ H E+ H+ R L+ I G + VA+NP TP+++L
Sbjct: 64 VHLMLSRPEDFILPFARAGADYISVHAEACTHLHRVLQQIREAGCRPAVALNPATPLSVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ--AKALIGKRSISLEVDGGVTSRNIK 184
+ V+ E++MIL+MTVNPGFGGQ+ I + +PKI AK + I LEVDGG+
Sbjct: 124 DHVLGEVEMILLMTVNPGFGGQEFIPAMLPKIASLAAKLRENRLDILLEVDGGINPETAA 183
Query: 185 SLVQAGADLLVVGSSFFN--QKG----EISYAKRLNDLK 217
+ QAGA +LV GS+ F +G E+ A +LN ++
Sbjct: 184 AACQAGAGVLVAGSAVFGCPDRGAAIRELRQAGKLNRVQ 222
>gi|160890848|ref|ZP_02071851.1| hypothetical protein BACUNI_03293 [Bacteroides uniformis ATCC 8492]
gi|270295854|ref|ZP_06202054.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D20]
gi|317479722|ref|ZP_07938844.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 4_1_36]
gi|156859847|gb|EDO53278.1| hypothetical protein BACUNI_03293 [Bacteroides uniformis ATCC 8492]
gi|270273258|gb|EFA19120.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D20]
gi|316904092|gb|EFV25924.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 4_1_36]
Length = 216
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 129/199 (64%), Gaps = 4/199 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L +I I ++ A+ +H D+MDG FVPNISFG V++ + S D
Sbjct: 5 ISPSILSADFGYLARDIEMINESEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSQKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I + G ++ H E+ PH+ R ++ I G + V INP TPV++L
Sbjct: 65 VHLMIVQPEKFIPEVKALGAHVMNVHYEACPHLHRVVQQIREAGMQPAVTINPATPVSLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I+++ M+LIM+VNPGFGGQ+ IE ++ K+R+ + LI G +++ +EVDGGV
Sbjct: 125 KDIINDVYMVLIMSVNPGFGGQKFIEHSLDKVRELRELITVTGSQAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
LV+AGAD+LV G++ F+
Sbjct: 184 SRLVEAGADVLVAGNAVFS 202
>gi|331701493|ref|YP_004398452.1| ribulose-phosphate 3-epimerase [Lactobacillus buchneri NRRL
B-30929]
gi|329128836|gb|AEB73389.1| ribulose-phosphate 3-epimerase [Lactobacillus buchneri NRRL
B-30929]
Length = 217
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 131/216 (60%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + + GA+ +H D+MDG FVP +S+G ++++R + +
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVDQGGAEVLHIDIMDGQFVPALSYGPGWVKAIRPITKMI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + I+ ADAG DII H E++PHI R+L+ I G K V INP TPV+
Sbjct: 62 LDVHMMVEQPERFIDQFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ V+ +D +L+MTVNPGFGGQ+ + T+ KI + L ++ +E+DGGV
Sbjct: 122 AIKPVLYMVDQVLVMTVNPGFGGQKFLPETVKKIAELDELKKSEGLNFDIEIDGGVNDHT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ QAGA + V GS F+ +S K + D K
Sbjct: 182 VVGAYQAGATVAVAGSYVFDADDPVSRIKAIKDATK 217
>gi|154485078|ref|ZP_02027526.1| hypothetical protein EUBVEN_02801 [Eubacterium ventriosum ATCC
27560]
gi|149734031|gb|EDM50150.1| hypothetical protein EUBVEN_02801 [Eubacterium ventriosum ATCC
27560]
Length = 220
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 126/199 (63%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LG +I I +AG IH D+MDG FVPNISFG V ++ R+Y+
Sbjct: 2 IKLAPSILSADFANLGNDIKRIDQAGCDWIHVDIMDGMFVPNISFGMPVTKAARAYTKKY 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ G D++T H E+ ++ ++ IHA G G+A NPETPV
Sbjct: 62 FDVHLMIQEPIRYVKEFKAVGADMLTVHVEACEDVQATIDAIHAEGMDAGLACNPETPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ID+++MILIMTV+PGFGGQ I+ KI A++ + ++ +EVDGG+ N
Sbjct: 122 DIVPFIDKVEMILIMTVHPGFGGQSYIDECTEKIEIVNAIVHEYNLKTLIEVDGGIKVDN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
+ + AGA+++V GS+ F
Sbjct: 182 VCIPLDAGANVIVAGSAVF 200
>gi|314936616|ref|ZP_07843963.1| ribulose-phosphate 3-epimerase [Staphylococcus hominis subsp.
hominis C80]
gi|313655235|gb|EFS18980.1| ribulose-phosphate 3-epimerase [Staphylococcus hominis subsp.
hominis C80]
Length = 214
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 129/210 (61%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L+ DF L +EI + +AG +HFDVMDG FVPNIS G ++ ++RS +
Sbjct: 3 HIFPSLLSVDFLNLKQEIQLLEEAGVDGLHFDVMDGQFVPNISIGLPILDAVRSTTQLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +++I A G D+I+ H ES+PHI R+++ I ++ KK GV INP TPV
Sbjct: 63 DVHLMIENPENYIETFAKHGADMISVHIESTPHIHRAIQLIKSLDKKAGVVINPGTPVDR 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ V+ +D +L+MTVNPGFGGQ I+ KI+ L +++ +EVDGG+ + I
Sbjct: 123 VVPVLSMVDYVLVMTVNPGFGGQTFIDMCASKIKLLNDLKSSFNLNFDIEVDGGINDKTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ GA+L V GS FFNQ + K L
Sbjct: 183 DICAKHGANLFVTGSYFFNQDDYKTVTKIL 212
>gi|297566483|ref|YP_003685455.1| ribulose-phosphate 3-epimerase [Meiothermus silvanus DSM 9946]
gi|296850932|gb|ADH63947.1| ribulose-phosphate 3-epimerase [Meiothermus silvanus DSM 9946]
Length = 224
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 135/203 (66%), Gaps = 5/203 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP + I PS+LAADF+RLGE++ + GA IH DVMDG FVPNIS G V+ ++R +
Sbjct: 5 TP-VWIAPSVLAADFTRLGEQVREAQEGGADLIHVDVMDGRFVPNISMGIVVVEAIRRVA 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ AG +TFH E++PH R+++ I +G K G+A+NP T
Sbjct: 64 QIPLDVHLMIVEPEKYLADFVQAGATYLTFHAEATPHAHRAVQRIRELGAKPGLALNPAT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P++ LE ++ ++D+ L+MTVNPGFGGQ+ I + ++R+ +AL + + + +EVDGG+T
Sbjct: 124 PLSFLETLLPDLDLALLMTVNPGFGGQKFIPGSTQRLRELRALRDRLNPACLIEVDGGIT 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ + + +GAD+LV GSS FN
Sbjct: 184 PQTVTQV--SGADILVAGSSVFN 204
>gi|167760438|ref|ZP_02432565.1| hypothetical protein CLOSCI_02812 [Clostridium scindens ATCC 35704]
gi|167661937|gb|EDS06067.1| hypothetical protein CLOSCI_02812 [Clostridium scindens ATCC 35704]
Length = 221
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 132/202 (65%), Gaps = 4/202 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF LG+E+ + GA+ +HFDVMDG FVP+ISFG V+ S++ + D
Sbjct: 6 LAPSILAADFKNLGQEMKKTEENGARYLHFDVMDGMFVPSISFGMPVLASVKGGTSQTMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ AG DI+T H E+ ++ ++ I G K G++I PET L
Sbjct: 66 VHLMVQEPIRYVEAFQKAGADILTVHLEACEDVKTTIDKIRECGMKVGLSICPETETEAL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++++DMIL+M+V+PGFGGQ+ I ++ KIR+ + +I ++ S+ +EVDGG+ N++
Sbjct: 126 KPFLEDVDMILVMSVHPGFGGQKFIPESLDKIRKVRGMIEEQGLSVDVEVDGGIYLTNVR 185
Query: 185 SLVQAGADLLVVGSSFFNQKGE 206
+++AG +++V GS+ F KGE
Sbjct: 186 EVLEAGVNVVVAGSAVF--KGE 205
>gi|326331205|ref|ZP_08197499.1| ribulose-phosphate 3-epimerase [Nocardioidaceae bacterium Broad-1]
gi|325950975|gb|EGD43021.1| ribulose-phosphate 3-epimerase [Nocardioidaceae bacterium Broad-1]
Length = 222
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 126/200 (63%), Gaps = 4/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL ADF+ LG E++ I A IH DVMD FVPN++FG ++ ++ +
Sbjct: 4 IQITPSILNADFAALGAEVARIPSA--DWIHVDVMDNHFVPNLTFGPTMVEAIARSTSVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +AGC +TFH E++ R R I A G + +A+ P TP+
Sbjct: 62 LDAHLMIENADREAPAYVEAGCGSVTFHVEATKAPVRLAREIRAKGARASMALKPATPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
ED++ E+DM+L+MTV PGFGGQ+ ++ +PKIR+A++++ K + L+VDGGV+
Sbjct: 122 PYEDMLAELDMVLLMTVEPGFGGQKFLDLVLPKIRRARSMMDKHGVETWLQVDGGVSLET 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I+ +AGAD+ V GS+ ++
Sbjct: 182 IERCAEAGADVFVAGSAVYS 201
>gi|323142742|ref|ZP_08077458.1| ribulose-phosphate 3-epimerase [Succinatimonas hippei YIT 12066]
gi|322417493|gb|EFY08111.1| ribulose-phosphate 3-epimerase [Succinatimonas hippei YIT 12066]
Length = 225
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVF 65
I SIL+AD L +++++ G+ IHFDVMD FVPN++FG ++++R+ + +VF
Sbjct: 8 IAGSILSADLLNLEKDVADALANGSDVIHFDVMDYHFVPNLTFGPGFLKAMRARFPQAVF 67
Query: 66 DCHLMISSI-DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I A AG D+I+FHPE++ H+ R L I +G K G+A+NP T
Sbjct: 68 DVHLMVDPVTDKIIEDYAQAGADMISFHPETTFHVERMLTLIQNLGCKAGLALNPGTAPQ 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L + D++D +L+MTVNPGFGGQ+LI S + K+ K + + ++ +EVDGGV R
Sbjct: 128 CLRYLWDKLDFVLVMTVNPGFGGQKLIPSCLQKVADVKRMATEANVKPLIEVDGGVDVRT 187
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
IK+ AGA+L VVGS+FF +
Sbjct: 188 IKACADAGANLFVVGSAFFGK 208
>gi|188585968|ref|YP_001917513.1| ribulose-5-phosphate 3-epimerase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350655|gb|ACB84925.1| ribulose-5-phosphate 3-epimerase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 224
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 10/213 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+AD +L E+I + AGA IH DVMDG FVPNI+ G ++ +L+ + D
Sbjct: 5 VAPSILSADLLKLEEQIKAVEAAGADMIHVDVMDGRFVPNITMGPKIVEALKRITSIPCD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I+ A AG DI+T H E+S H+ R++ I A K GV++NP TP+ +
Sbjct: 65 VHLMIEEPEKYIDKFAQAGADILTIHQEASLHLDRNIEAITAHDIKAGVSLNPATPLEQI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIE------STIPKIRQAKALIGKRSISLEVDGGVTS 180
+ V+ ++D +L+M+VNPGFGGQ+ I S + KIR+A GK S ++VDGG+
Sbjct: 125 KWVLPKLDQVLLMSVNPGFGGQKYIPYVSGKISDLDKIRKA----GKYSFMIQVDGGINH 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
N K ++ +GAD+LV GS+ F+ K + A +L
Sbjct: 181 SNAKQVLDSGADILVAGSAIFSSKLGLEQAIKL 213
>gi|255011312|ref|ZP_05283438.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis 3_1_12]
Length = 218
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +++ I ++ A +H D+MDG FVPNISFG V++ + + D
Sbjct: 7 ISPSILSADFAYLAKDLEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKLTQKPLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 67 VHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPATPVALL 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ + LI G +++ +EVDGGV
Sbjct: 127 QDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRELIERTGSKAL-IEVDGGVNLETG 185
Query: 184 KSLVQAGADLLVVGSSFF 201
LV AGAD LV G++ F
Sbjct: 186 ARLVAAGADALVAGNAIF 203
>gi|15639930|ref|NP_219381.1| ribulose-phosphate 3-epimerase (cfxE) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189026168|ref|YP_001933940.1| ribulose-phosphate 3-epimerase [Treponema pallidum subsp. pallidum
SS14]
gi|6647759|sp|O66107|RPE_TREPA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2988419|gb|AAC08057.1| pentose-5-phosphate 3-epimerase homolog [Treponema pallidum]
gi|3323267|gb|AAC65902.1| ribulose-phosphate 3-epimerase (cfxE) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018743|gb|ACD71361.1| ribulose-phosphate 3-epimerase [Treponema pallidum subsp. pallidum
SS14]
gi|291060300|gb|ADD73035.1| ribulose-phosphate 3-epimerase [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 218
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 124/204 (60%), Gaps = 2/204 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S + PS+L+ADFS L + + GA+ +H DVMDG FVPN++FGA V+R LRS
Sbjct: 1 MERSFTLAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLM+S I AG D +TFH E+ H R + I G K G+++ P
Sbjct: 61 THLPFDVHLMVSRPADLIEDFVQAGADFLTFHIEAEVHAHRLIHAIRGRGVKVGISLVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA L +V+ +D++L+MTVNPGF GQQ+I + K+ + +R S + VDGG+
Sbjct: 121 TPVAALSEVLPFVDLVLVMTVNPGFSGQQMIAHCLSKVSALVQMRTERGYSYMISVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
R + + AGAD++V GS+FF+
Sbjct: 181 DCRTLPQALDAGADVIVSGSAFFS 204
>gi|313149122|ref|ZP_07811315.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis 3_1_12]
gi|313137889|gb|EFR55249.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis 3_1_12]
Length = 216
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 127/198 (64%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +++ I ++ A +H D+MDG FVPNISFG V++ + + D
Sbjct: 5 ISPSILSADFAYLAKDLEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKLTQKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPATPVALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ + LI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRELIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFF 201
LV AGAD LV G++ F
Sbjct: 184 ARLVAAGADALVAGNAIF 201
>gi|260893169|ref|YP_003239266.1| ribulose-phosphate 3-epimerase [Ammonifex degensii KC4]
gi|260865310|gb|ACX52416.1| ribulose-phosphate 3-epimerase [Ammonifex degensii KC4]
Length = 215
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PS+L+ADFS L ++ + +AGA +H DVMDG FVPNI+FG VI +LR S V
Sbjct: 2 IKVAPSLLSADFSCLLRDVKRVEEAGADYLHLDVMDGHFVPNITFGPPVIAALRPQSHLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + +I DAG D+IT H E+ H+ R+L I G + GVA+NP TP
Sbjct: 62 FDVHLMIEAPERYIKDFVDAGADLITVHVEACRHLHRTLTAIKENGCRAGVALNPATPPQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+E V+D +D++L+M+VNPGFGGQ I + +PKI ++ I +R +++E VDGGV +
Sbjct: 122 AVEYVLDLVDLVLVMSVNPGFGGQSFIPAVLPKISLLRSWIEERGLAVEIAVDGGVNRQT 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
+V+AGA +LV G++ F
Sbjct: 182 APMVVKAGATVLVAGTAVFG 201
>gi|313158974|gb|EFR58351.1| ribulose-phosphate 3-epimerase [Alistipes sp. HGB5]
Length = 216
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 130/201 (64%), Gaps = 4/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L + I ++ A+ +H DVMDG FVPNISFG V++++R + D
Sbjct: 5 VAPSMLSADFGHLERDTQMIDRSAAEWVHIDVMDGVFVPNISFGFPVLKAIRKATAKCLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ A+AG D++TFH E++ + + + I G K GV+I P T V +L
Sbjct: 65 VHLMIVEPERYVARFAEAGADVVTFHYEATYNPKGCIEMIRNAGAKVGVSIKPATSVEVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSRNI 183
D++ +ID++LIM+V PGFGGQ I +++ KI Q +AL +G +I +EVDGG++S N
Sbjct: 125 RDILPQIDLVLIMSVEPGFGGQAFIPASLEKIAQLRALADELGTETI-IEVDGGISSHNA 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ AGAD+LV G++ F +
Sbjct: 184 HEVFGAGADVLVAGNAVFGAE 204
>gi|256544913|ref|ZP_05472284.1| ribulose-phosphate 3-epimerase [Anaerococcus vaginalis ATCC 51170]
gi|256399412|gb|EEU13018.1| ribulose-phosphate 3-epimerase [Anaerococcus vaginalis ATCC 51170]
Length = 220
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 140/216 (64%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+A+FS L +++ + K+ K +H DVMDG FVPNISFG +I+++R +D V
Sbjct: 2 VEIAPSLLSANFSNLQKDLDELKKSNIKYLHIDVMDGKFVPNISFGFPIIKAIRKDNDFV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I G DI+T H E+ ++ ++ I + G K G++ P+T +
Sbjct: 62 FDTHLMIEEPIRYIENFKKCGSDIVTIHYEACSNLDETIEKIKSFGMKVGLSFKPKTDIN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +++ID+ LIM+V PGFGGQ +E ++ KI++ +ALI ++++S +EVDGG+ N
Sbjct: 122 KIIPYLEKIDLCLIMSVEPGFGGQSFMEDSLEKIKKIRALIDEKNLSCLIEVDGGIKDFN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K ++ AG DL+V GS F+ E S ++++ KK
Sbjct: 182 LKKVIDAGVDLVVSGSDIFSN-NENSISRQVEKYKK 216
>gi|296161471|ref|ZP_06844277.1| ribulose-phosphate 3-epimerase [Burkholderia sp. Ch1-1]
gi|295888286|gb|EFG68098.1| ribulose-phosphate 3-epimerase [Burkholderia sp. Ch1-1]
Length = 239
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+RL +EI +T AGA IH DVMD +VPN++ G V ++R ++ D
Sbjct: 6 IAPSLLSADFARLADEIRAVTAAGADWIHLDVMDNHYVPNLTVGPLVCAAIRPHTSVPID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM +DS + A+AG + I+FHPE+S H+ R++ I + G + G+A+NP TP+A+L
Sbjct: 66 VHLMTMPVDSLVAGFAEAGANTISFHPEASLHVHRTIELIKSSGARAGLALNPATPLAVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ VI+ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVDGGV +
Sbjct: 126 DHVIERLDVVLLMSVNPGFGGQAFIPETLDKLRVLRERVDAAMQRTGRLLLIEVDGGVKA 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F G YA+ + ++
Sbjct: 186 ANIARIAAAGADVFVAGSAVF---GAGDYAQAIGTMR 219
>gi|218661235|ref|ZP_03517165.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli IE4771]
Length = 130
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 96/124 (77%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 2 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMIS +D ++ A AGCD IT H ES PH+ RSL+T+ +GKK GV +NP
Sbjct: 62 TDATFDCHLMISPVDDYLEAFAKAGCDRITVHAESGPHLHRSLQTVRNLGKKVGVTLNPG 121
Query: 121 TPVA 124
P++
Sbjct: 122 NPLS 125
>gi|255994458|ref|ZP_05427593.1| ribulose-phosphate 3-epimerase [Eubacterium saphenum ATCC 49989]
gi|255993171|gb|EEU03260.1| ribulose-phosphate 3-epimerase [Eubacterium saphenum ATCC 49989]
Length = 221
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 125/200 (62%), Gaps = 8/200 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILA+DF+ L EI I + GA IH D+MDG FVPNIS+G D++R + +D FD
Sbjct: 3 LAPSILASDFTDLKSEIKKIEEGGADLIHMDIMDGHFVPNISYGPDIVRQISEITDMPFD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + +I + I H E+S H+ R + I + G + GVAINP TPV +L
Sbjct: 63 VHLMIENPERYIEKFITKNTEYICVHEEASVHLNRLIDQIKSAGARAGVAINPSTPVVML 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS-----ISLEVDGGVTSR 181
++V+ ++DM+L+M VNPGFGGQ+ ++ + KI KAL KR + VDGGVT
Sbjct: 123 DEVLRDVDMVLVMAVNPGFGGQKFLDLSYNKI---KALDEKRKHMDLGFKIAVDGGVTLD 179
Query: 182 NIKSLVQAGADLLVVGSSFF 201
N + L +G+D+ V+G+ F
Sbjct: 180 NAEKLAASGSDIFVMGTYIF 199
>gi|254829108|ref|ZP_05233795.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258601519|gb|EEW14844.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
Length = 214
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++ HI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAASHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R K S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDNWRRKNHGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
QAG D+LV GS FF G A + LKK
Sbjct: 184 KCKQAGVDILVAGSYFF---GATDKAACIQGLKK 214
>gi|193214519|ref|YP_001995718.1| Ribulose-phosphate 3-epimerase [Chloroherpeton thalassium ATCC
35110]
gi|193087996|gb|ACF13271.1| Ribulose-phosphate 3-epimerase [Chloroherpeton thalassium ATCC
35110]
Length = 221
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L I KAGA IH DVMDG FVPNI+FG ++ ++ ++ + D
Sbjct: 9 IAPSILSADFTNLRGAIELAEKAGADWIHCDVMDGMFVPNITFGPFIVEAVSRCTELIID 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D +I AG +T H E H+ R++ I + G K GV++NP T V+ L
Sbjct: 69 THLMIADPDRYIKEFVAAGSHQVTVHQEECKHLHRTVDFIKSCGAKAGVSLNPSTNVSTL 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
ED++ ++D++LIM+VNPGFGGQ+ I+S I KI++ L +++ + + +DGG++ +N
Sbjct: 129 EDILPDLDLVLIMSVNPGFGGQKFIKSAIDKIKKLAQLRQEKNPDLVIAIDGGISPKNAG 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+V AG + L+ GS+FF + K++
Sbjct: 189 EVVAAGGNALIAGSAFFKAEDPFEVVKKM 217
>gi|319899938|ref|YP_004159666.1| ribulose-5-phosphate 3-epimerase [Bacteroides helcogenes P 36-108]
gi|319414969|gb|ADV42080.1| ribulose-5-phosphate 3-epimerase [Bacteroides helcogenes P 36-108]
Length = 217
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 127/199 (63%), Gaps = 4/199 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L +I I ++ A+ +H D+MDG FVPNISFG V++ + S+ D
Sbjct: 5 ISPSILSADFGYLARDIEMINQSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKLSEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I + G I+ H E+ PH+ R ++ I G + + INP TPVA+L
Sbjct: 65 VHLMIVQPEKFIPEVKALGAYIMNVHYEACPHLHRVVQQIREAGMQPAITINPATPVAML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+DVI ++ M+L+M+VNPGFGGQ+ IE +I K+R+ + LI G +++ +EVDGGV
Sbjct: 125 KDVIRDVYMVLVMSVNPGFGGQKFIEHSIEKVRELRELISITGSQAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
LV+AGAD LV G+ F+
Sbjct: 184 ARLVKAGADALVAGNFVFS 202
>gi|150002658|ref|YP_001297402.1| ribulose-phosphate 3-epimerase [Bacteroides vulgatus ATCC 8482]
gi|254882157|ref|ZP_05254867.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 4_3_47FAA]
gi|294776912|ref|ZP_06742373.1| ribulose-phosphate 3-epimerase [Bacteroides vulgatus PC510]
gi|319643284|ref|ZP_07997912.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_40A]
gi|149931082|gb|ABR37780.1| ribulose-phosphate 3-epimerase [Bacteroides vulgatus ATCC 8482]
gi|254834950|gb|EET15259.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 4_3_47FAA]
gi|294449160|gb|EFG17699.1| ribulose-phosphate 3-epimerase [Bacteroides vulgatus PC510]
gi|317385188|gb|EFV66139.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_40A]
Length = 217
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 132/213 (61%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F+ L +I I ++ A +H D+MDG FVPNISFG V++ + S+ D
Sbjct: 6 ISPSLLSANFANLQADIEQINRSDADWLHIDIMDGVFVPNISFGFPVLKYVAELSEKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + D G ++ H E+ H+ R ++ I G K V +NP TPVA+L
Sbjct: 66 VHLMIVNPEKFIKEVKDLGTMMMNVHYEACVHLHRVVQQIKDAGMKAAVTLNPSTPVAML 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
D+I ++DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI G +++ +EVDGGV
Sbjct: 126 ADIIRDVDMVLLMSVNPGFGGQKFIVHTLDKVRELRELITNTGSQAL-IEVDGGVNLETG 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+AGAD+LV G++ F RL L
Sbjct: 185 RQLVEAGADVLVAGNAVFKAPDMSDMIHRLKSL 217
>gi|320451057|ref|YP_004203153.1| ribulose-phosphate 3-epimerase [Thermus scotoductus SA-01]
gi|320151226|gb|ADW22604.1| ribulose-phosphate 3-epimerase [Thermus scotoductus SA-01]
Length = 222
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 139/221 (62%), Gaps = 5/221 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PSIL AD +RL ++I AG IH DVMDG FVPN++FG ++ ++R +
Sbjct: 2 LKFAPSILTADLARLKDQIEEAEAAGVDWIHLDVMDGVFVPNLTFGPLLVEAVRRVTSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ A AG D+IT H E++PH R+++ + +GKK G+AINP TP+
Sbjct: 62 LDVHLMIVQPERYLEDFARAGADVITVHFEATPHAHRAVQKVKELGKKAGLAINPATPLE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
E ++ E+D+ L+M+VNPGFGGQ+ I ++ ++RQ K + + + S +EVDGGV
Sbjct: 122 AFEPLLPELDLALLMSVNPGFGGQRYIPTSTGRLRQLKEMRDRLNPSCLIEVDGGVNRDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + +AGAD+ V GS+ FN++ A L +LK+ A+
Sbjct: 182 VAEVYRAGADVAVAGSALFNRR---PVADNLKELKEVLYAL 219
>gi|15606282|ref|NP_213661.1| ribulose-5-phosphate 3-epimerase [Aquifex aeolicus VF5]
gi|6226024|sp|O67098|RPE_AQUAE RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2983483|gb|AAC07062.1| ribulose-5-phosphate 3-epimerase [Aquifex aeolicus VF5]
Length = 222
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 137/219 (62%), Gaps = 2/219 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILA D+ +GE+I + GA +H+DVMDG FVPNI+ G +++ +R + D
Sbjct: 4 LAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPID 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I +AG + I+ H E++ HI R+L+ I +G K GV +NP T ++ +
Sbjct: 64 AHLMIENPDKYIPKFVEAGANWISVHIENNYHIHRTLQLIKELGAKAGVVVNPGTSLSAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+ + D +L+M+VNPGF GQ+ IE +I ++R K + + S +E+DGG+ NI
Sbjct: 124 EEALYYADYVLLMSVNPGFSGQKFIERSIERLRILKEMRDRINPSCLIEIDGGIKENNIA 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+V+AGAD++VVGS F K + ++L L SA+++
Sbjct: 184 EVVRAGADVVVVGSGIFGAKDIEAQTRKLKSLMLSAVSV 222
>gi|312622705|ref|YP_004024318.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor kronotskyensis
2002]
gi|312203172|gb|ADQ46499.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor kronotskyensis
2002]
Length = 221
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+++F+ L E+ + A A +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 3 IKIAPSILSSNFADLKNELKKLELAKADLVHIDVMDGNFVDNITIGAPVVSSLRKNSTLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + HI +G D IT H E + H+ + I + GKK VA+NP TPV
Sbjct: 63 FDVHLMVLHPEKHIEKFVQSGADNITVHAEVTYHLDALISKIKSFGKKASVALNPATPVY 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E+V++ +DM+L+MTVNPG+GGQ+ I T+ KI L K +S +EVDGG+
Sbjct: 123 MIENVLEIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGLSFEIEVDGGINEET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
I V AGA+++V GS F+ G++S
Sbjct: 183 IVDCVNAGANVIVAGSYVFDS-GDVS 207
>gi|332877535|ref|ZP_08445282.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684641|gb|EGJ57491.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 216
Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L E+ I ++ +H D+MDG FVPNISFG V++ + + D
Sbjct: 5 VAPSLLSADFGNLKSEMDMINRSECDWLHIDIMDGVFVPNISFGFPVLKYVARLCEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +N + G + H E+ PH+ R ++ I G K GV +NP TPV+ L
Sbjct: 65 VHLMIVQPEKFLNEVKALGAYSMNVHVEACPHLHRVVQQIKETGMKAGVTLNPATPVSSL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI-GKRSISL-EVDGGVTSRNIK 184
D+I+++D++++M VNPGFGGQ I T+ K+R+ + +I G RS +L EVDGGV +
Sbjct: 125 TDIIEDVDIVMLMAVNPGFGGQTFIPHTLDKVRELRRMIDGSRSKALIEVDGGVNRDTGR 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV GS+ F+ I + L +L
Sbjct: 185 LLVEAGADVLVAGSAVFHAADAIEEIRVLKNL 216
>gi|150015437|ref|YP_001307691.1| ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
gi|149901902|gb|ABR32735.1| Ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
Length = 219
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 132/215 (61%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
+++ PSIL A+F +L E I + K G K++H D+MDG FVPNI+FG D I+ ++ + D
Sbjct: 2 EVKLSPSILGANFLKLEETIVKLKKQGIKELHIDIMDGHFVPNIAFGIDQIKMIKQIACD 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+++ + I+ + +AG + IT H ESSPHI + I + G K GVA+NP TP
Sbjct: 62 IELDVHLMVTNPEIFIDALVEAGANTITIHQESSPHIYNLMYIIKSFGIKVGVALNPATP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
+ L+ + ++ ILIMTV PGFGGQ IE + KI + I +I L+VDGG+
Sbjct: 122 INTLKHISHMVNKILIMTVEPGFGGQSFIEPMMEKINEVSNFIKSENIECELQVDGGINL 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI +V+ GA +VVGS+ F ++ S KR +
Sbjct: 182 ENIGKVVENGATNIVVGSAIFREEDIDSTIKRFRE 216
>gi|329960185|ref|ZP_08298627.1| ribulose-phosphate 3-epimerase [Bacteroides fluxus YIT 12057]
gi|328532858|gb|EGF59635.1| ribulose-phosphate 3-epimerase [Bacteroides fluxus YIT 12057]
Length = 216
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 128/199 (64%), Gaps = 4/199 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L ++ I ++ A+ IH D+MDG FVPNISFG V++ + ++ D
Sbjct: 5 ISPSILSADFGYLARDLEMINQSEAQWIHIDIMDGVFVPNISFGFPVLKYVAKLAEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I + G I+ H E+ PH+ R ++ I G + V INP TPVA+L
Sbjct: 65 VHLMIVQPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPATPVAML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ + LI G +++ +EVDGGV
Sbjct: 125 KDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRELITLTGSQAL-IEVDGGVNLDTG 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
L++AGAD LV G++ F+
Sbjct: 184 ARLIEAGADALVAGNAVFS 202
>gi|284033031|ref|YP_003382962.1| ribulose-phosphate 3-epimerase [Kribbella flavida DSM 17836]
gi|283812324|gb|ADB34163.1| ribulose-phosphate 3-epimerase [Kribbella flavida DSM 17836]
Length = 222
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL+ADF+ L +E + ++ A +H DVMD FVPN++ G V+ SL +
Sbjct: 3 IQIAPSILSADFANLADEAAAVSNA--DWLHVDVMDNHFVPNLTLGLPVVESLAKAAAQP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D +AG +TFH E+ R+ R I A G + +A+ P TP+
Sbjct: 61 LDCHLMIEDPDRWAPGYVEAGASSVTFHAEACRAPIRTAREIRAKGARASMALKPATPIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
ED++ E+DMILIMTV PGFGGQ+ ++ +PKIR+ + L+ + + L ++DGGV++
Sbjct: 121 PYEDLLPELDMILIMTVEPGFGGQKFLDVCVPKIRRTRQLLDQHGLELWIQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ + + +L L ++A
Sbjct: 181 IERCAEAGADVFVAGSAVYAADDPNTMVDKLRTLAENA 218
>gi|222529039|ref|YP_002572921.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor bescii DSM
6725]
gi|222455886|gb|ACM60148.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor bescii DSM
6725]
Length = 221
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 3/206 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+++F+ L E+ + A A +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 3 IKIAPSILSSNFADLKNELKKLELAKADLVHIDVMDGNFVDNITIGAPVVSSLRKNSTLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + HI +G D IT H E + H+ + I + GKK VA+NP TPV
Sbjct: 63 FDVHLMVLHPEKHIEKFVQSGADNITVHAEVTYHLDALISKIKSFGKKASVALNPATPVY 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E+V++ +DM+L+MTVNPG+GGQ+ I T+ KI L K +S +EVDGG+
Sbjct: 123 MIENVLEIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGLSFEIEVDGGINEET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
I V AGA+++V GS F+ G++S
Sbjct: 183 IIDCVNAGANVIVAGSYVFDS-GDVS 207
>gi|254497946|ref|ZP_05110710.1| D-ribulose-5-phosphate-3-epimerase [Legionella drancourtii LLAP12]
gi|254352840|gb|EET11611.1| D-ribulose-5-phosphate-3-epimerase [Legionella drancourtii LLAP12]
Length = 217
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 134/215 (62%), Gaps = 6/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSD 62
+ QI+PS+L+AD + LG+E+ + AGA IHFDVMD +VPN++FG +L + +
Sbjct: 2 TYQILPSMLSADLTCLGDEVGAVMLAGADYIHFDVMDNHYVPNLTFGPAFCAALIKRFPQ 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D+ I A AG I+ HP+++ H+ RSL+ I +G TG+ +NP T
Sbjct: 62 LPIDVHLMVKPVDALIESFAKAGAKRISIHPDATIHLDRSLQLIKDLGCATGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +L ++D +L+MTVNPGFGGQ+LI I KI Q + + + L VDGGVTS+N
Sbjct: 122 IDVLTWCAYKLDFVLVMTVNPGFGGQKLIPEIIEKITQIRQRYPQ--LDLCVDGGVTSKN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I +L AGA+ V GS+ FN +Y + +N ++
Sbjct: 180 IATLAHAGANQFVAGSAIFNSN---NYQETINTMR 211
>gi|260584624|ref|ZP_05852370.1| ribulose-phosphate 3-epimerase [Granulicatella elegans ATCC 700633]
gi|260157647|gb|EEW92717.1| ribulose-phosphate 3-epimerase [Granulicatella elegans ATCC 700633]
Length = 214
Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 129/217 (59%), Gaps = 12/217 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+A+F+ LGE++ + + GA IH D MDG FVPN++ G +++ LR +
Sbjct: 1 MKVAPSILSANFATLGEDVKKVEQLGADWIHIDAMDGQFVPNLTLGPNIVEGLRPITTLT 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+ + + A AG D I+ H E++ HI R+L+ I + G K G+ INP TPV+
Sbjct: 61 LDCHLMVQEPERFVKEFAKAGADYISVHIEATNHIHRTLQLIKSEGVKAGIVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+ +D++L+MTVNPGFGGQ I T+ K+R+ L + +EVDGGV +
Sbjct: 121 AISAVLGMVDLVLVMTVNPGFGGQAFIPETLDKVRELVELREEYGYHYLIEVDGGVNGQT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
K +AG D+ V G SY +D+KK+
Sbjct: 181 AKLCREAGVDVAVAG----------SYVYYADDIKKA 207
>gi|125624957|ref|YP_001033440.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493765|emb|CAL98757.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071757|gb|ADJ61157.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 220
Score = 171 bits (434), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 134/218 (61%), Gaps = 6/218 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF ++ ++ AGA +H DVMDG FV N++FGA V+ +LRS + F
Sbjct: 4 KIAPSILSADFGNFARDVKHLETAGADLVHIDVMDGHFVDNLTFGAGVVSALRSQTSLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + +++ A AG D ++ H E++ HI +L+ I G K V INP TPV
Sbjct: 64 DVHMMVENPEKYVDDFAKAGADSMSIHVEATNHIHGALQKIKNAGMKASVVINPGTPVEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
++ V+ +DM+L+MTVNPGFGGQ+ I + K+R+ + K + +EVDGG+ + I
Sbjct: 124 IKTVLPLVDMVLVMTVNPGFGGQKFIPEMMDKVRELTQIRTDKKLNFEIEVDGGIDDQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
K AGA++ V GS FN GE+ K + LK+ +
Sbjct: 184 KVAKAAGANVFVAGSFVFN--GEVE--KNIEKLKEELM 217
>gi|237712463|ref|ZP_04542944.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 9_1_42FAA]
gi|237726654|ref|ZP_04557135.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D4]
gi|265752169|ref|ZP_06087962.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_33FAA]
gi|229435180|gb|EEO45257.1| ribulose-phosphate 3-epimerase [Bacteroides dorei 5_1_36/D4]
gi|229453784|gb|EEO59505.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 9_1_42FAA]
gi|263236961|gb|EEZ22431.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_33FAA]
Length = 217
Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 131/213 (61%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F+ L +I I ++ A +H D+MDG FVPNISFG V++ + + D
Sbjct: 6 ISPSLLSANFANLQADIEQINRSDADWLHIDIMDGVFVPNISFGFPVLKYVAELCEKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + D G ++ H E+ H+ R ++ I G K V +NP TPVA+L
Sbjct: 66 VHLMIVNPEKFIKEVKDLGTMMMNVHYEACVHLHRVVQQIKDAGMKAAVTLNPSTPVAML 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
D+I ++DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI G R++ +EVDGGV
Sbjct: 126 VDIIRDVDMVLLMSVNPGFGGQKFIVHTLDKVRELRELITHTGSRAL-IEVDGGVNLETG 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+AGAD+LV G++ F RL L
Sbjct: 185 RQLVEAGADVLVAGNAVFKAPDMSDMIHRLKSL 217
>gi|210633105|ref|ZP_03297672.1| hypothetical protein COLSTE_01581 [Collinsella stercoris DSM 13279]
gi|210159259|gb|EEA90230.1| hypothetical protein COLSTE_01581 [Collinsella stercoris DSM 13279]
Length = 211
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
Query: 29 AGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDI 88
A A IH DVMDG FVPN+S+G ++++ + +D D HLM+S+ D I+ DAG D+
Sbjct: 12 ACADLIHVDVMDGHFVPNLSYGTAIVKACKGATDIPLDVHLMVSNPDDTIDWYIDAGADL 71
Query: 89 ITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ 148
+T H E+S H+ R++ I G K GV +NP TPV +LED+I+++DM+L+M+VNPGFGGQ
Sbjct: 72 LTVHYEASTHLHRTIAHIKERGCKAGVVLNPATPVFVLEDIIEDVDMVLLMSVNPGFGGQ 131
Query: 149 QLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
I TI K+RQ AL ++ +EVDGGV N + + AGA +LV GS+ F K
Sbjct: 132 AFIPRTIEKLRQLTALCASHGVAPLIEVDGGVGIANAEGIAAAGATVLVAGSAVFGAK 189
>gi|168703187|ref|ZP_02735464.1| Ribulose-phosphate 3-epimerase [Gemmata obscuriglobus UQM 2246]
Length = 218
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 129/217 (59%), Gaps = 4/217 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFS+LGE + +TKAGA +IH DVMDG FVPN+S GA V+ LR + +
Sbjct: 2 IAPSILAADFSKLGELVREVTKAGADRIHVDVMDGHFVPNLSMGAVVVEGLRPVTTIPLE 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI-HAMGKKTGVAINPETPVAI 125
HLM+ ++ AG D + H E P R + I A+GKK G+A NP+ PV
Sbjct: 62 VHLMVEDPGRFLDGFVKAGADTLIVHLEVLPDPRPMVEHIKKALGKKVGLAFNPDMPVER 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+E + +ID+ L MTV PGFGGQ I ++ ++R+ KALIG + +EVDGG+ ++ I
Sbjct: 122 IEPYLKDIDLALCMTVFPGFGGQAFIPESLERLRKLKALIGAHNPACEIEVDGGIGAKTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKS 219
AGA++ V GS+ F K G + K L L K
Sbjct: 182 ADCAAAGANVFVAGSAVFGAKQGPAAAMKDLIALAKQ 218
>gi|53715186|ref|YP_101178.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis YCH46]
gi|52218051|dbj|BAD50644.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis YCH46]
gi|301164633|emb|CBW24192.1| putative ribulose-phosphate 3-epimerase [Bacteroides fragilis 638R]
Length = 216
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 7/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L ++I I ++ A +H D+MDG FVPNISFG V++ + + D
Sbjct: 5 ISPSILSADFAYLAKDIEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKLTSKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP TP+A+L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPATPIALL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+++ + LI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVKELRELIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
L+ AGAD LV G++ F N +G I K L
Sbjct: 184 ARLIAAGADALVAGNAIFAAENPEGMIHAMKGL 216
>gi|257868088|ref|ZP_05647741.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC30]
gi|257874638|ref|ZP_05654291.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC10]
gi|257802202|gb|EEV31074.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC30]
gi|257808802|gb|EEV37624.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC10]
Length = 217
Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 127/200 (63%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 2 IKLAPSILSADFANLQRDIELVERHGADYIHVDVMDGHFVPNITLGPNIVKAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ + +I+ A+AG DII H E++PHI R+++ I A K + INP T V+
Sbjct: 62 LDVHLMITEPEKYIHAFAEAGADIIGIHAEATPHIHRAIQMIVAENVKAEIVINPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+ D +L+MTVNPGFGGQ IE ++ KI AL ++ +EVDGG+
Sbjct: 122 AIEHVLSMCDQVLVMTVNPGFGGQSFIEESLEKIAVLAALKEEKGYHYDIEVDGGIVPET 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
K ++AGA++ V GS ++
Sbjct: 182 AKRCLEAGANVFVAGSYIYD 201
>gi|2851605|sp|P51013|RPE_RHORU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
Length = 225
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 129/197 (65%), Gaps = 4/197 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I+I PS+L+ADF+ + + GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MTRAIRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM +D I+ A+AG D+ITFHPE+S H+ RS++ I G K GVA+NP
Sbjct: 61 TSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
+P+++L+ +++++D++LIM+VNPGFGGQ I S +PKI A G+R VDGGV
Sbjct: 121 SPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKI--AALANGRRRACRGDRVDGGV 178
Query: 179 TSRNIKSLVQAGADLLV 195
+ ++L + GAD+LV
Sbjct: 179 NPADARALARPGADILV 195
>gi|330995938|ref|ZP_08319833.1| ribulose-phosphate 3-epimerase [Paraprevotella xylaniphila YIT
11841]
gi|329574277|gb|EGG55852.1| ribulose-phosphate 3-epimerase [Paraprevotella xylaniphila YIT
11841]
Length = 216
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L E+ I ++ +H D+MDG FVPNISFG V++ + + D
Sbjct: 5 VAPSLLSADFGNLKPEMDMINRSECDWLHIDIMDGVFVPNISFGFPVLKYVARLCEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +N + G + H E+ PH+ R ++ I G K GV +NP TPV+ L
Sbjct: 65 VHLMIVQPEKFLNEVRALGAYSMNVHVEACPHLHRVVQQIKEAGMKAGVTLNPATPVSSL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI-GKRSISL-EVDGGVTSRNIK 184
D+I+++D++++M VNPGFGGQ I T+ K+R+ + +I G RS +L EVDGGV +
Sbjct: 125 TDIIEDVDIVMLMAVNPGFGGQAFIPHTLDKVRELRRMIDGSRSKALIEVDGGVNRDTGR 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV GS+ F+ I + L +L
Sbjct: 185 LLVEAGADVLVAGSAVFHAADAIEEIRVLKNL 216
>gi|218295267|ref|ZP_03496103.1| Ribulose-phosphate 3-epimerase [Thermus aquaticus Y51MC23]
gi|218244470|gb|EED10995.1| Ribulose-phosphate 3-epimerase [Thermus aquaticus Y51MC23]
Length = 222
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 135/216 (62%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PSIL AD SRL E I AG IH DVMDG FVPN++FG ++ ++R +
Sbjct: 1 MRFAPSILTADLSRLKEVIGEAEAAGVDWIHLDVMDGVFVPNLTFGPILVEAVRRVTRLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + ++ A AG D+IT H E++PH R+++ + +GKK G+AINP TP+A
Sbjct: 61 LDVHLMIVNPERYLEDFARAGADVITVHFEATPHAHRAVQKVKELGKKAGLAINPATPLA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
E ++ E+D+ L+M+VNPGFGGQ+ I + ++R+ KA+ + + +EVDGGV
Sbjct: 121 AFEALLPELDLALLMSVNPGFGGQKYIPQSTERLRRLKAMRDALNPACLIEVDGGVNQTT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + AGAD+ VVGS+ FN K K L ++ K
Sbjct: 181 VGEVYLAGADVAVVGSALFNDKPVRENLKALKEVLK 216
>gi|152966924|ref|YP_001362708.1| ribulose-phosphate 3-epimerase [Kineococcus radiotolerans SRS30216]
gi|151361441|gb|ABS04444.1| Ribulose-phosphate 3-epimerase [Kineococcus radiotolerans SRS30216]
Length = 221
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 134/220 (60%), Gaps = 2/220 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S+Q+ PSIL+ADF+ L E+ I+ A A H DVMDG FVPN++ G ++ +L+
Sbjct: 1 MSRSVQVNPSILSADFANLEAELRRISTADAA--HVDVMDGHFVPNLTLGLPIVEALQRV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S DCHLMI + D A+AG +TFH E++ + R I A G + G+A+ P
Sbjct: 59 SPIPLDCHLMIEAPDRWAPAYAEAGAAGVTFHAEAAMAPVKLAREIRAAGGRAGIALRPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ D++ E DM+L+MTV PGFGGQ ++ T+PKI +A+A IG + L+VDGGV++
Sbjct: 119 TPLEPFVDLLAEFDMLLVMTVEPGFGGQSFLDVTLPKIARARAAIGDLDVRLQVDGGVSA 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ + + + L +L A
Sbjct: 179 STIERAAEAGADVFVAGSAVYGAEDAAAAIGTLRELAAGA 218
>gi|227510462|ref|ZP_03940511.1| ribulose-phosphate 3-epimerase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190114|gb|EEI70181.1| ribulose-phosphate 3-epimerase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 217
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+AD+ L +I + K GA+ +H D+MDG FVP +S+G +++++ ++
Sbjct: 2 IKIAPSILSADYVNLQRDIEKVDKGGAELLHIDIMDGAFVPALSYGPGWVKAIKPITNLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + + +I+ ADAG DII H E++PHI R+L+ I K V INP TPV+
Sbjct: 62 LDVHMMVQNPERYIDDFADAGADIIGVHTEATPHIHRALQMIKNRNVKAEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ+ + T+ KI + + ++ ++ +E+DGGV
Sbjct: 122 AITPVLYMVDQVLVMTVNPGFGGQKFLPETVKKIAELDKIKKEQGLNFDIEIDGGVNETT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS F+ +S K L D
Sbjct: 182 VVGAYKAGATVAVAGSYIFDADDPVSKIKALKD 214
>gi|329957241|ref|ZP_08297761.1| ribulose-phosphate 3-epimerase [Bacteroides clarus YIT 12056]
gi|328522954|gb|EGF50057.1| ribulose-phosphate 3-epimerase [Bacteroides clarus YIT 12056]
Length = 216
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +I I + A +H D+MDG FVPNISFG V++ + ++ D
Sbjct: 5 ISPSILSADFAYLANDIEMINGSEADWVHIDIMDGVFVPNISFGFPVLKYVAKLTEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I + G I+ H E+ PH+ R ++ I G V INP TPVA+L
Sbjct: 65 VHLMIVQPEKFIPEVKALGARIMNVHYEACPHLHRVVQQIREAGMLPAVTINPATPVAML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
D+ID++ M+LIM VNPGFGGQ+ IE T+ K+R+ + LI G ++ +EVDGGV
Sbjct: 125 RDIIDDVYMVLIMGVNPGFGGQKFIEHTVDKVRELRELITVTGSEAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGA+ LV G++ F+ + L +L
Sbjct: 184 ARLVEAGANALVAGNAVFSAPDPAEAIRALKNL 216
>gi|325679120|ref|ZP_08158714.1| ribulose-phosphate 3-epimerase [Ruminococcus albus 8]
gi|324109244|gb|EGC03466.1| ribulose-phosphate 3-epimerase [Ruminococcus albus 8]
Length = 237
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 129/208 (62%), Gaps = 3/208 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+L D + + EI NI KAGA +H DVMDGCFV NISFG V++ +R SD D HL
Sbjct: 29 SLLGCDLADIRSEIKNIEKAGADWLHCDVMDGCFVNNISFGTPVLKCVRKASDLPMDTHL 88
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
MI+ +I+ A G D ITFH E++P + + IH+ GK G++I P TPV+ +E
Sbjct: 89 MINDPIRYIDDYAGLGSDYITFHLEAAPDPQAVIDRIHSHGKFAGISIKPATPVSEVEPY 148
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNIKSL 186
+ DM+L+MTV PGFGGQ+ I +T+ KI + + ++ G+ + +EVDGG+ + +K
Sbjct: 149 LATADMVLVMTVVPGFGGQKFIPATLEKISEIRYMLDSMGRDKVFIEVDGGINAETVKFC 208
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLN 214
+AGAD++V GS F + + + K L
Sbjct: 209 REAGADVMVSGSYLFGAEDKSAAVKSLK 236
>gi|299135639|ref|ZP_07028823.1| ribulose-phosphate 3-epimerase [Acidobacterium sp. MP5ACTX8]
gi|298601763|gb|EFI57917.1| ribulose-phosphate 3-epimerase [Acidobacterium sp. MP5ACTX8]
Length = 247
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 137/219 (62%), Gaps = 3/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ SILAADF+ L +EI+ + G +H DVMDG FVPNI+FG V++++R +
Sbjct: 2 IELAFSILAADFAHLADEIARAERGGGTIVHVDVMDGHFVPNITFGPPVVKAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D I A+AG ++++ H E H+ R+L+ I G GV INP TPV
Sbjct: 62 LDCHLMIEDPDQFIPAFAEAGANMVSVHVEVCRHLNRTLQHIIDHGMGAGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L +V+ + +L+M+VNPGFGGQ+ + ++ +I + L + ++ +EVDGGV
Sbjct: 122 MLIEVLPMVHHVLVMSVNPGFGGQKFLPRSVERIAHLRRLREEMGLNFRIEVDGGVAHDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ-KGEISYAKRLNDLKKSA 220
+ S+V+AGAD+LV GS+ F + K E + + L +K+A
Sbjct: 182 VASVVEAGADMLVAGSAIFEKGKTEKNAREFLRIARKAA 220
>gi|260893694|ref|YP_003239791.1| ribulose-phosphate 3-epimerase [Ammonifex degensii KC4]
gi|260865835|gb|ACX52941.1| ribulose-phosphate 3-epimerase [Ammonifex degensii KC4]
Length = 230
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 129/201 (64%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++++ PS+LAADF RL EE++ + AGA +H D+MDG FVPNI+FG V+ +LR +S
Sbjct: 2 TVKVAPSLLAADFGRLREEVARVEAAGADLLHLDIMDGHFVPNITFGPQVVAALRPHSRL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI + + AG D+IT H E+ H+ R L + G GVA+NP TP
Sbjct: 62 PFDVHLMIEQPERYAEDFLAAGADLITVHVEAVVHLHRLLTRLKERGVMVGVALNPSTPA 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI-GKRSISL-EVDGGVTSR 181
++E+V+ +D++L+MTVNPGFGGQ+ I +PKI +I K S +L EVDGG+ +
Sbjct: 122 VMVEEVLPLVDVVLVMTVNPGFGGQKFIPEVVPKIAHLTRMIAAKESRALIEVDGGIDAT 181
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
+V+AGA +LV G+S F
Sbjct: 182 TAPLVVEAGAQILVAGTSVFK 202
>gi|320170901|gb|EFW47800.1| ribulose-5-phosphate-3-epimerase [Capsaspora owczarzaki ATCC 30864]
Length = 230
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 129/213 (60%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+LA+D S L E + AGA +H DVMDG FVPNI+ GA VI+ LR +S +
Sbjct: 7 NCRIGPSVLASDMSCLASETQRVVDAGADYVHLDVMDGHFVPNITMGAPVIKCLRKHSKA 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H+M+S + ++ +ADAG D TFH ES+ +R I A K GVAI P TP
Sbjct: 67 FFDLHMMVSKPEQWVDDMADAGGDQFTFHLESTADPMALIRQIRAKNMKVGVAIKPNTPA 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRN 182
+E ++ +DM+L+MTV PGFGGQ+ + +PK+ + + + +EVDGGV
Sbjct: 127 ESVEYLVPHVDMVLVMTVEPGFGGQKFMAHMMPKVEHLRTKFPE--MDIEVDGGVGVGAT 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA+++V GSS +N + ++L +
Sbjct: 185 IDACAKAGANMIVAGSSVYNAADPAAVIRQLRE 217
>gi|209363677|ref|YP_001423535.2| ribulose-phosphate 3-epimerase [Coxiella burnetii Dugway 5J108-111]
gi|212211897|ref|YP_002302833.1| ribulose-phosphate 3-epimerase [Coxiella burnetii CbuG_Q212]
gi|212217847|ref|YP_002304634.1| ribulose-phosphate 3-epimerase [Coxiella burnetii CbuK_Q154]
gi|215919281|ref|NP_820849.2| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 493]
gi|206584165|gb|AAO91363.2| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 493]
gi|207081610|gb|ABS77359.2| ribulose-phosphate 3-epimerase [Coxiella burnetii Dugway 5J108-111]
gi|212010307|gb|ACJ17688.1| ribulose-phosphate 3-epimerase [Coxiella burnetii CbuG_Q212]
gi|212012109|gb|ACJ19489.1| ribulose-phosphate 3-epimerase [Coxiella burnetii CbuK_Q154]
Length = 231
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I SIL+ADFSRLGEE+ ++ +AGA IHFDVMD FVPN+SFGA V ++LR +
Sbjct: 15 ISASILSADFSRLGEEVKSVIQAGADNIHFDVMDHHFVPNLSFGAVVCKALRDAKITAPI 74
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + + I A+AG ++ITFHPE+ + ++ I G + G+A NPE +++
Sbjct: 75 DVHLMVKNPNEFIKPFAEAGANLITFHPETVKDVEDTIARIKKAGMQVGMAFNPEKSLSL 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+ +ID++L+M+VNPGF GQ + ++ KI + L+ + L +DGG+ NI
Sbjct: 135 FTSFLTKIDLVLLMSVNPGFAGQSFMAESLKKIAATRQLLDTLQSKAFLGIDGGIKINNI 194
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGAD VVGS F+ +Y ++L +++ +
Sbjct: 195 ADVSRAGADFFVVGSGLFHSS---NYEEKLKEMRHA 227
>gi|160932347|ref|ZP_02079738.1| hypothetical protein CLOLEP_01183 [Clostridium leptum DSM 753]
gi|156868949|gb|EDO62321.1| hypothetical protein CLOLEP_01183 [Clostridium leptum DSM 753]
Length = 236
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+LA DF+ + +EI +T+ GA IH DVMDG FVPNISFG VI+++R Y+D
Sbjct: 23 MKVSPSVLACDFAHMADEIQKVTQGGADYIHLDVMDGNFVPNISFGPAVIKAIRPYTDVP 82
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + DAG D ITFH E+ P+I +L I G ++I P T
Sbjct: 83 FDVHLMVERPSRYFQDYLDAGADNITFHLEAEPYIAPALDQIRKAGCSASLSIKPGTEAE 142
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +D++ M+L+MTV PGFGGQ+LI + K+++ KA +R + +EVDGG+ S
Sbjct: 143 AVFPYLDKLYMVLVMTVEPGFGGQKLIPECLEKVKKIKAEAKRRGLKVLVEVDGGINSET 202
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
AG D+ V G+ F + K L +
Sbjct: 203 AHEAAAAGVDVCVAGTGVFRAPDVAAAIKELQN 235
>gi|227524613|ref|ZP_03954662.1| ribulose-phosphate 3-epimerase [Lactobacillus hilgardii ATCC 8290]
gi|227088288|gb|EEI23600.1| ribulose-phosphate 3-epimerase [Lactobacillus hilgardii ATCC 8290]
Length = 217
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+AD+ L +I + K GA+ +H D+MDG FVP +S+G +++++ ++
Sbjct: 2 IKIAPSILSADYVNLQRDIEKVDKGGAELLHIDIMDGAFVPALSYGPGWVKAIKPITNLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + + +I+ ADAG DII H E++PHI R+L+ I K V INP TPV+
Sbjct: 62 LDVHMMVQNPERYIDDFADAGADIIGVHKEATPHIHRALQMIKNRNVKAEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ+ + T+ KI + + ++ ++ +E+DGGV
Sbjct: 122 AITPVLYMVDQVLVMTVNPGFGGQKFLPETVKKITELDKIKKEQGLNFDIEIDGGVNETT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS FN + K L D
Sbjct: 182 VVGAYKAGATVAVAGSYIFNADDPVLKIKALKD 214
>gi|153206256|ref|ZP_01945519.1| ribulose-phosphate 3-epimerase [Coxiella burnetii 'MSU Goat Q177']
gi|161830694|ref|YP_001597690.1| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 331]
gi|120577386|gb|EAX34010.1| ribulose-phosphate 3-epimerase [Coxiella burnetii 'MSU Goat Q177']
gi|161762561|gb|ABX78203.1| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 331]
Length = 222
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I SIL+ADFSRLGEE+ ++ +AGA IHFDVMD FVPN+SFGA V ++LR +
Sbjct: 6 ISASILSADFSRLGEEVKSVIQAGADNIHFDVMDHHFVPNLSFGAVVCKALRDAKITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + + I A+AG ++ITFHPE+ + ++ I G + G+A NPE +++
Sbjct: 66 DVHLMVKNPNEFIKPFAEAGANLITFHPETVKDVEDTIARIKKAGMQVGMAFNPEKSLSL 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+ +ID++L+M+VNPGF GQ + ++ KI + L+ + L +DGG+ NI
Sbjct: 126 FTSFLTKIDLVLLMSVNPGFAGQSFMAESLKKIAATRQLLDTLQSKAFLGIDGGIKINNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGAD VVGS F+ +Y ++L +++ +
Sbjct: 186 ADVSRAGADFFVVGSGLFHSS---NYEEKLKEMRHA 218
>gi|254383560|ref|ZP_04998910.1| ribulose-phosphate 3-epimerase [Streptomyces sp. Mg1]
gi|194342455|gb|EDX23421.1| ribulose-phosphate 3-epimerase [Streptomyces sp. Mg1]
Length = 228
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 123/201 (61%), Gaps = 4/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + G+ +H DVMD FVPN++ G ++ SL +D
Sbjct: 2 AVQINPSILSADFARLAEEAKAVE--GSDWLHVDVMDNHFVPNLTLGMPIVESLSRATDI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDLHLMIEDPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARAAMALKPGTPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + +I K + L+VDGGV++
Sbjct: 120 EQYEDLLPELDMVLIMTVEPGFGGQSFLDIMLPKIRRTREMIAKHGLDLWLQVDGGVSAT 179
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ +AGAD+ V GS+ +
Sbjct: 180 TIERAAEAGADVFVAGSAVYG 200
>gi|289435924|ref|YP_003465796.1| ribulose-phosphate 3-epimerase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289172168|emb|CBH28714.1| ribulose-phosphate 3-epimerase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 214
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AG+ +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAELAGSDYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+++ +++I A AG II+ H E++PHI R ++ I G K GV +NP TP ++L
Sbjct: 64 VHLMLANPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKQAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++ ++D++L MTVNPGFGGQ I+STI +R K S +EVDGGV + +
Sbjct: 124 DAILGDVDLVLQMTVNPGFGGQAFIDSTIENMRYLDNWRRKNRGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
QAG D+LV GS FF + +++ + L
Sbjct: 184 KCKQAGVDVLVAGSYFFGAEDKVACVQGL 212
>gi|218128565|ref|ZP_03457369.1| hypothetical protein BACEGG_00135 [Bacteroides eggerthii DSM 20697]
gi|317475620|ref|ZP_07934881.1| ribulose-phosphate 3-epimerase [Bacteroides eggerthii 1_2_48FAA]
gi|217989289|gb|EEC55603.1| hypothetical protein BACEGG_00135 [Bacteroides eggerthii DSM 20697]
gi|316908190|gb|EFV29883.1| ribulose-phosphate 3-epimerase [Bacteroides eggerthii 1_2_48FAA]
Length = 216
Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+A+F+ L +I I + A +H D+MDG FVPNISFG V++ + ++ D
Sbjct: 5 ISPSILSANFAYLANDIEMINGSEAGWVHIDIMDGVFVPNISFGFPVLKYVAKLAEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I + G I+ H E+ PH+ R ++ I G V INP TPVA+L
Sbjct: 65 VHLMIVQPEKFIPEVKALGARIMNVHYEACPHLHRVVQQIREAGMLPAVTINPATPVAML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
D+I+++ M+L+M+VNPGFGGQ+ IE TI K+R+ + LI G ++ +EVDGGV
Sbjct: 125 RDIINDVYMVLVMSVNPGFGGQKFIEHTIDKVRELRELITVTGSEAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD+LV G++ F+ + L +L
Sbjct: 184 ARLVAAGADVLVAGNAIFSAPDPVEAIHALRNL 216
>gi|119356369|ref|YP_911013.1| ribulose-5-phosphate 3-epimerase [Chlorobium phaeobacteroides DSM
266]
gi|119353718|gb|ABL64589.1| ribulose-5-phosphate 3-epimerase [Chlorobium phaeobacteroides DSM
266]
Length = 221
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L I+ AGA IH D+MDG FVPNI+FG +++++ + D
Sbjct: 8 LAPSILSADFTALASSIAVAENAGADWIHCDIMDGVFVPNITFGPFIVQAISRCTTMTID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D I AG + +T H E+ PH+ R+++ I ++G K GV+INP T +A L
Sbjct: 68 THLMIIDPDRFIADFIKAGSNQVTVHQEACPHLHRTIQLIKSLGAKAGVSINPGTTLATL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E ++ ++D++L+M+VNPGFGGQ I S+I KI + R+ + + VDGG+T N
Sbjct: 128 ESILPDLDLVLLMSVNPGFGGQSFIPSSIDKIAALDRMRCDRNPEMIIAVDGGITEDNAG 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+V AGAD L+ G++FF A++L
Sbjct: 188 VVVDAGADALIAGTAFFKAADPAEAARKL 216
>gi|165919287|ref|ZP_02219373.1| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 334]
gi|165917010|gb|EDR35614.1| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 334]
Length = 222
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I SIL+ADFSRLGEE+ ++ +AGA IHFDVMD FVPN+SFGA V ++LR
Sbjct: 6 ISASILSADFSRLGEEVKSVIQAGADNIHFDVMDHHFVPNLSFGAVVCKALRDAKITEPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + + I A+AG ++ITFHPE+ + ++ I G + G+A NPE +++
Sbjct: 66 DVHLMVKNPNEFIKPFAEAGANLITFHPETVKDVEDTIARIKKAGMQVGMAFNPEKSLSL 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+ +ID++L+M+VNPGF GQ + ++ KI + L+ + L +DGG+ NI
Sbjct: 126 FTSFLTKIDLVLLMSVNPGFAGQSFMAESLKKIAATRQLLDTLQSKAFLGIDGGIKINNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGAD VVGS F+ +Y ++L +++ +
Sbjct: 186 ADVSRAGADFFVVGSGLFHSS---NYEEKLKEMRHA 218
>gi|72161481|ref|YP_289138.1| ribulose-phosphate 3-epimerase [Thermobifida fusca YX]
gi|71915213|gb|AAZ55115.1| ribulose-5-phosphate 3-epimerase [Thermobifida fusca YX]
Length = 222
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 137/221 (61%), Gaps = 3/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF+RL +E+ + A A +H DVMD FVPN++ G V+ SL +
Sbjct: 2 AIQISPSILSADFARLADEVEAVAGA-ADWLHVDVMDNHFVPNLTLGLPVVESLLKVAPL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E++ R+LR I A G + G+A+NP TPV
Sbjct: 61 PLDCHLMIEDPDRWAPAYAEVGAQSVTIHAEAAKAPVRTLRAIRAAGARAGLALNPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
D++ EIDM+L+MTV PGFGGQ+ ++ +PKIR+A+ LI S+ L+VDGGV++
Sbjct: 121 DGYADLLGEIDMLLVMTVEPGFGGQKFLDLVLPKIRRARELIRNADASVWLQVDGGVSAE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + +K + + L L + A A
Sbjct: 181 TIERCAEAGADVFVAGSAVYGEKDPAAAVEHLRALAERATA 221
>gi|311894787|dbj|BAJ27195.1| putative ribulose-phosphate 3-epimerase [Kitasatospora setae
KM-6054]
Length = 227
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 120/199 (60%), Gaps = 4/199 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G ++ SL + +
Sbjct: 3 QINPSILSADFARLADEAEAVR--GADWLHVDVMDNHFVPNLTLGVPIVESLARATGTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEQPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALRPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV I
Sbjct: 121 YEDLLPELDMVLIMTVEPGFGGQAFLDIMLPKIRRTRQLIDKHGLDLWLQVDGGVAPATI 180
Query: 184 KSLVQAGADLLVVGSSFFN 202
+ +AGAD+ V GS+ +
Sbjct: 181 DACAEAGADVFVAGSAVYG 199
>gi|78188158|ref|YP_378496.1| ribulose-phosphate 3-epimerase [Chlorobium chlorochromatii CaD3]
gi|78170357|gb|ABB27453.1| ribulose-5-phosphate 3-epimerase [Chlorobium chlorochromatii CaD3]
Length = 218
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 142/218 (65%), Gaps = 3/218 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+I + PS+L+ADF+RL + ++ ++GA+ +H D+MDG FVPNISFG +++++ S +
Sbjct: 2 PTI-LAPSVLSADFTRLADSLTIANESGAEWMHCDIMDGNFVPNISFGPFIVKAVASCTS 60
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLMI+ D I AG IT H E+ PH+ R+++ I + G K GV+INP TP
Sbjct: 61 MIIDTHLMITDPDRFIEEFVKAGSHQITVHQEACPHLHRTIQLIKSFGVKAGVSINPGTP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
V+ LE V+ ++D++L+M+VNPGFGGQ+ I S + K++Q + K + + + VDGG+T
Sbjct: 121 VSALEAVLTDLDLVLLMSVNPGFGGQKFIPSAVGKVQQLHEMRMKLNPEMVIAVDGGITE 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +S+V AGAD L+ G++FF A + + +
Sbjct: 181 ENAQSVVSAGADALIAGTAFFKAPDPAKTAATIRAMSR 218
>gi|126640767|ref|YP_001083751.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii ATCC
17978]
Length = 190
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 39 MDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
MD +VPN++FGA V ++L++Y + D HLM+S +D I +AG DIITFHPE+S
Sbjct: 1 MDNHYVPNLTFGAGVCKALKNYGITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASH 60
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
HI RSL+ I + G K G+ NP TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K
Sbjct: 61 HIDRSLQLIKSGGAKAGLVFNPATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEK 120
Query: 158 IRQAKALI--GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
+R+A+ +I R I LEVDGGV NI+ + +AGAD+ V GS+ F Q
Sbjct: 121 LREARKIIDASGRDIRLEVDGGVGPANIREIAEAGADMFVAGSAIFGQ 168
>gi|315640407|ref|ZP_07895518.1| ribulose-phosphate 3-epimerase [Enterococcus italicus DSM 15952]
gi|315483832|gb|EFU74317.1| ribulose-phosphate 3-epimerase [Enterococcus italicus DSM 15952]
Length = 218
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 132/217 (60%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 MKIAPSILSADFANLQRDIEFVEKHGADYIHVDVMDGQFVPNITFGPAVVQAIRPITKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + I+ A AG DII H E++PH+ R+++ I A K V INP TPV
Sbjct: 63 LDVHLMIVNPERFIHEFAKAGADIIGVHIEATPHLHRAIQMIKAENVKAEVVINPGTPVE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+ +D IL+MTVNPGFGGQ + KIR+ L + +EVDGG+ +
Sbjct: 123 AIKYVLPLVDQILVMTVNPGFGGQSFLPEMADKIRELAKLKEQYGYHYDIEVDGGIDDQT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ +AGA++ V GS + G +R+N LK++
Sbjct: 183 IRVCAEAGANVFVAGSYIY---GAQHPEERINALKEA 216
>gi|253566321|ref|ZP_04843775.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_2_5]
gi|265767014|ref|ZP_06094843.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_16]
gi|251945425|gb|EES85863.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_2_5]
gi|263253391|gb|EEZ24867.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_16]
Length = 216
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 132/213 (61%), Gaps = 7/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L ++I I ++ A +H D+MDG FVPNISFG V++ + + D
Sbjct: 5 ISPSILSADFAYLAKDIEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKLTSKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP TP+ +L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPATPITLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+++ + LI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVKELRELIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
L+ AGAD LV G++ F N +G I K L
Sbjct: 184 ARLIAAGADALVAGNAIFAAENPEGMIHAMKGL 216
>gi|299473285|emb|CBN77685.1| ribulose-phosphate 3-epimerase [Ectocarpus siliculosus]
Length = 285
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 136/215 (63%), Gaps = 10/215 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAAD SRL EE ++ + GA IH DVMDG FVPN++FGA VI+ LR ++ ++ D
Sbjct: 38 IGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLD 97
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S ++ +A AG D TFH E++ + + + A G GVA+ P TPV +
Sbjct: 98 AHLMVSHPAQWVDDMAAAGVDRFTFHVEATDKVAELIAAVKAKGMGVGVALKPATPVEEV 157
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
D++D++LIMTV PGFGGQ + + K+++ + +R + +EVDGG+ + I+
Sbjct: 158 FPYCDDLDLVLIMTVEPGFGGQSFMADQMSKVKELR----RRYPGLDIEVDGGLADKTIE 213
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA+L+V GS F KG + A+R+N LK++
Sbjct: 214 EAARAGANLIVCGSYIF--KG--NKAERINLLKQA 244
>gi|270157776|ref|ZP_06186433.1| ribulose-phosphate 3-epimerase [Legionella longbeachae D-4968]
gi|269989801|gb|EEZ96055.1| ribulose-phosphate 3-epimerase [Legionella longbeachae D-4968]
Length = 228
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 131/211 (62%), Gaps = 6/211 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSY 60
T + I+PSIL+AD + LG E+ ++ KAGA IHFDVMD +VPN++FG +L + +
Sbjct: 11 TMTYHILPSILSADLTCLGAEVDSVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIQRF 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI +D+ I A AG I+ HP+++ H+ RSL I +G + G+ +NP
Sbjct: 71 PQLPIDVHLMIEPVDALIESFAKAGAKRISIHPDATIHLDRSLNLIKDLGCEAGLVLNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ +L ++D +LIMTVNPGFGGQ+LI I KI Q + + + L VDGGVT+
Sbjct: 131 TPIEVLTWCAHKLDFVLIMTVNPGFGGQKLIPEIINKIPQIRERYPQ--LDLCVDGGVTT 188
Query: 181 RNIKSLVQAGADLLVVGSSFF---NQKGEIS 208
NI +L +AGA+ V GS+ F N K IS
Sbjct: 189 DNIATLARAGANQFVAGSAVFKSANYKDTIS 219
>gi|313891923|ref|ZP_07825524.1| ribulose-phosphate 3-epimerase [Dialister microaerophilus UPII
345-E]
gi|313119566|gb|EFR42757.1| ribulose-phosphate 3-epimerase [Dialister microaerophilus UPII
345-E]
Length = 213
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 132/201 (65%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF+ L +E+ I K+GA +H D+MDG FVPN++FG +I ++R ++
Sbjct: 1 MKIAPSLLSADFANLEKEVREIEKSGADLLHLDMMDGHFVPNLTFGVPIINAIRKHTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ + + +++ + G +I+FH E+S H R ++ I K G+AINP T +
Sbjct: 61 FDIHMMVFNPEKYLDELEKVGVQMISFHQEASIHQDRIIQEIKERKIKAGIAINPATSIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ +D +LIM+VNPGFGGQ+ I T+ K+++ K +I + +EVDGG+ + N
Sbjct: 121 NIEPILPILDYVLIMSVNPGFGGQKFIYYTLEKVKKLKKIIQNNGYNTLIEVDGGIKAEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
I+ L AGAD+ V GS+ F +
Sbjct: 181 IQLLKDAGADICVAGSAVFGK 201
>gi|160942675|ref|ZP_02089918.1| hypothetical protein FAEPRAM212_00147 [Faecalibacterium prausnitzii
M21/2]
gi|158446030|gb|EDP23033.1| hypothetical protein FAEPRAM212_00147 [Faecalibacterium prausnitzii
M21/2]
gi|295104472|emb|CBL02016.1| ribulose-5-phosphate 3-epimerase [Faecalibacterium prausnitzii
SL3/3]
Length = 216
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
+ PSIL+ADF +LG + + AGA+ +H+DVMDG FVPNISFG V++SL ++ D+ +
Sbjct: 4 VSPSILSADFGKLGADCRMVLDAGAQMLHYDVMDGHFVPNISFGVPVLKSLHKALPDAFY 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMIS + AG + FH E I+ ++ + A+G K G+ I P TP
Sbjct: 64 DVHLMISHPLQYAEPFIKAGATLYNFHLECEDDIQATIDAVRALGCKVGLTIKPGTPAEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L +D++D++L+M+V PGFGGQ+ + S + K+R KA R +S LEVDGGV +
Sbjct: 124 LAPWLDQLDLVLVMSVEPGFGGQKFMPSALDKLRWLKAEREARGLSYLLEVDGGVDAATA 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
V+AGAD+LV GS+ F
Sbjct: 184 PLCVEAGADVLVAGSAVFG 202
>gi|116512859|ref|YP_811766.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
SK11]
gi|116108513|gb|ABJ73653.1| ribulose-5-phosphate 3-epimerase [Lactococcus lactis subsp.
cremoris SK11]
Length = 216
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF ++ + AGA +H DVMDG FV N++FGA V+ +LRS + F
Sbjct: 4 KIAPSILSADFGNFARDVKQLEAAGADLVHIDVMDGHFVDNLTFGAGVVSALRSQTSLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + +++ A AG D ++ H E++ HI +L+ I G K V INP TPV
Sbjct: 64 DAHMMVENPEKYVDDFAKAGADSMSIHVEATNHIHGALQKIKNAGMKASVVINPGTPVEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
++ V+ +DM+L+MTVNPGFGGQ+ I + K+R+ + K + +EVDGG+ + I
Sbjct: 124 IKTVLPLVDMVLVMTVNPGFGGQKFIPEMMDKVRELTQIRTDKKLNFEIEVDGGIDDQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ AGA++ V GS FN + E + K +L
Sbjct: 184 QVAKAAGANVFVAGSFVFNGEVEKNIEKLRENL 216
>gi|239917586|ref|YP_002957144.1| ribulose-5-phosphate 3-epimerase [Micrococcus luteus NCTC 2665]
gi|281413927|ref|ZP_06245669.1| ribulose-5-phosphate 3-epimerase [Micrococcus luteus NCTC 2665]
gi|239838793|gb|ACS30590.1| ribulose-5-phosphate 3-epimerase [Micrococcus luteus NCTC 2665]
Length = 223
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 125/201 (62%), Gaps = 4/201 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RL +E++ I A A +H DVMD FVPN++ G V+ ++R +D
Sbjct: 7 RLHPSILSADFARLADELARIPSADA--VHVDVMDNHFVPNLTLGLPVVEAIRRATDLPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D A+AG + +TFH E+S R R + A G K G+A+ P T V
Sbjct: 65 DLHLMIEDADRWAPGYAEAGAESVTFHAEASAAPVRLARELRAAGAKAGMALRPATAVEP 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
D++ E+DM+L+MTV PGFGGQ ++ +PKIR+A+ + G ++L+VDGGV I
Sbjct: 125 YLDMLPELDMLLLMTVEPGFGGQAFLDVVLPKIRRARHALDGGPAPLALQVDGGVNRETI 184
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ +AGAD+ V GS+ F +
Sbjct: 185 ERAAEAGADVFVAGSAVFGAE 205
>gi|123398284|ref|XP_001301245.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121882402|gb|EAX88315.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 225
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 125/201 (62%), Gaps = 4/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ L ++ +T AGA IH DVMD FVPN++ GA V+ SLR ++ S
Sbjct: 3 VHIAPSILSADFATLAQDCKVVTDAGADWIHVDVMDNHFVPNLTIGAPVVASLRKHTTSF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +I +A AG D TFH E++ + IHA K G+++ P+TP+
Sbjct: 63 LDVHLMVEYPEQYIEPMAKAGADQFTFHIEATKDASALIDAIHAKKMKAGISVKPKTPIE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK-RSISLEVDGGVTSRNI 183
+ +D++DMIL+MTV PGFGGQ + +PK+ AL K + +EVDGG++ + I
Sbjct: 123 SIYPYLDKVDMILVMTVEPGFGGQSFMADMMPKVS---ALRKKCPQLDIEVDGGLSPKTI 179
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
++ AGA+ +V GS+ F K
Sbjct: 180 ETAAAAGANCIVAGSAVFGAK 200
>gi|60683121|ref|YP_213265.1| putative ribulose-phosphate 3-epimerase [Bacteroides fragilis NCTC
9343]
gi|60494555|emb|CAH09354.1| putative ribulose-phosphate 3-epimerase [Bacteroides fragilis NCTC
9343]
Length = 216
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 132/213 (61%), Gaps = 7/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L ++I I ++ A +H D+MDG FVPNISFG V++ + + D
Sbjct: 5 ISPSILSADFAYLAKDIEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKLTSKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP TP+ +L
Sbjct: 65 VHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQLIREAGMQPAVTINPATPITLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+++ + LI G +++ +EVDGGV
Sbjct: 125 QDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVKELRELIERTGSKAL-IEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
L+ AGAD LV G++ F N +G I K L
Sbjct: 184 ARLIAAGADALVAGNAIFAAENPEGMIHAMKGL 216
>gi|329120989|ref|ZP_08249620.1| ribulose-phosphate 3-epimerase [Dialister micraerophilus DSM 19965]
gi|327471151|gb|EGF16605.1| ribulose-phosphate 3-epimerase [Dialister micraerophilus DSM 19965]
Length = 213
Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 132/201 (65%), Gaps = 2/201 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF+ L +E+ I K+GA +H D+MDG FVPN++FG +I ++R ++
Sbjct: 1 MKIAPSLLSADFANLEKEVREIEKSGADLLHLDMMDGHFVPNLTFGVPIINAIRKHTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ + + +++ + G +I+FH E+S H R ++ I K G+AINP T +
Sbjct: 61 FDIHMMVFNPEKYLSELEKVGVQMISFHQEASIHQDRIIQEIKERKIKAGIAINPATSIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ +D +LIM+VNPGFGGQ+ I T+ K+++ K +I + +EVDGG+ + N
Sbjct: 121 NIEPILPILDYVLIMSVNPGFGGQKFIYYTLEKVKKLKKIIQNNGYNTLIEVDGGIKAEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
I+ L AGAD+ V GS+ F +
Sbjct: 181 IQLLKDAGADICVAGSAVFGK 201
>gi|322708778|gb|EFZ00355.1| ribulose-phosphate 3-epimerase [Metarhizium anisopliae ARSEF 23]
Length = 251
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 134/233 (57%), Gaps = 31/233 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF++LGEE + + GA +H D+MDG FVPNI+FGA V+ +R +
Sbjct: 1 MTPPAIIAPSILSADFAQLGEECARTMEQGADWLHVDIMDGHFVPNITFGAPVVAKIRKH 60
Query: 61 SDS--------VFDCHLMISSIDSHINIIADAGCDIITFH-----------PESSPHIRR 101
D FDCH+MI+ + +AGCD+ FH PE + +
Sbjct: 61 VDKPTEGHGRGTFDCHMMIAEPKKWVKEFKNAGCDLYCFHYEAAFSTAAESPEQTSDKKT 120
Query: 102 S----LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQLI 151
S +R IHA G G+AI P+T V +L D++ ++ DM+L+MTV PGFGGQ+ +
Sbjct: 121 SPKDLIRYIHANGMLAGIAIKPDTSVDVLWDILETADPKEKPDMVLVMTVYPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
S +PK++ +A + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 ASELPKVQALRAKYPE--LNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAK 231
>gi|225018181|ref|ZP_03707373.1| hypothetical protein CLOSTMETH_02118 [Clostridium methylpentosum
DSM 5476]
gi|224949178|gb|EEG30387.1| hypothetical protein CLOSTMETH_02118 [Clostridium methylpentosum
DSM 5476]
Length = 234
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 128/215 (59%), Gaps = 5/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PS+L+ADF+ L +E + +AGA +H DVMDG FVPN++ GA V+ LR S
Sbjct: 25 EIKISPSMLSADFANLEQEARRMEQAGADMLHIDVMDGHFVPNLTLGAPVLACLRQKSGM 84
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMIS +I+ AG D+ITFH ES +R + A G + G+ + P+TP+
Sbjct: 85 FLDVHLMISDPLRYIDDFVKAGADLITFHVESDSDPAECIRRLRAHGVQVGITLKPDTPL 144
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E +D++DM L+MTV PGFGGQ + + K+R + + ++VDGG+ +
Sbjct: 145 TAIEPYLDQVDMALVMTVEPGFGGQSFLPEMMDKVRALRT--ARPVFDIQVDGGINEQTA 202
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K+ VQAGA++LV GS F G A+ + LK+
Sbjct: 203 KTAVQAGANILVAGSYVF---GAPDAAQAIASLKQ 234
>gi|160903337|ref|YP_001568918.1| ribulose-phosphate 3-epimerase [Petrotoga mobilis SJ95]
gi|160360981|gb|ABX32595.1| Ribulose-phosphate 3-epimerase [Petrotoga mobilis SJ95]
Length = 219
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 139/219 (63%), Gaps = 8/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
I+I PSILAADF L +E+ ++K A IH D+MDG FVPNI+FG ++ S+R + D
Sbjct: 2 IKIYPSILAADFLNLAQEVEKVSK-DADGIHLDIMDGVFVPNITFGFPIVESIRKKFKDI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D ++ + + + IT H E+ H+ R++ I +G + GV +NP TPV
Sbjct: 61 YLDAHLMIVEPDKYLENFSKS-VNSITVHYEAVTHLHRTVLKIKELGCEAGVTLNPHTPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSR 181
++LE+++ +D +LIM+VNPGF GQ IE+T K+R+ + L ++ +++E VDGGV +
Sbjct: 120 SLLEEILPYVDKVLIMSVNPGFTGQHFIETTYEKVRKLRRLSDEKGLNVEIMVDGGVNKQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI L Q+G + ++G+S F + ++ + +LKK A
Sbjct: 180 NIGLLHQSGVNTFIIGASVFYSENP---SQEIIELKKVA 215
>gi|260903810|ref|ZP_05912132.1| ribulose-phosphate 3-epimerase [Brevibacterium linens BL2]
Length = 220
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 4/218 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PSIL++DFS L E++ I+ A H DVMD FVPN++FG V+ +++ S
Sbjct: 2 AIEINPSILSSDFSDLRGELAKISTA--DMAHIDVMDNHFVPNLTFGPPVVERIQAISPI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ D H + A+ GC +TFH E++ R R I +G K +A+ P TP+
Sbjct: 60 PLDAHLMIAEADRHAPVYAELGCASVTFHAEAAAAPVRLAREIRKLGAKASLALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
D++ E D ILIMTV PGFGGQ+ ++ +PKIR+ + I I L+VDGGV++
Sbjct: 120 EPFIDLLGEFDQILIMTVEPGFGGQKFLDVCLPKIRRTREAISASGLEIKLQVDGGVSTS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++ +V AGAD+LV GS+ + + + L +L S
Sbjct: 180 TVERVVDAGADVLVAGSAVYGPEDAAAAISGLRELAAS 217
>gi|289705543|ref|ZP_06501935.1| ribulose-phosphate 3-epimerase [Micrococcus luteus SK58]
gi|289557772|gb|EFD51071.1| ribulose-phosphate 3-epimerase [Micrococcus luteus SK58]
Length = 223
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 125/201 (62%), Gaps = 4/201 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RL +E++ I A A +H DVMD FVPN++ G V+ ++R +D
Sbjct: 7 RLHPSILSADFARLADELARIPSADA--VHVDVMDNHFVPNLTLGLPVVEAIRRATDLPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D A+AG + +TFH E+S R R + A G K G+A+ P T V
Sbjct: 65 DLHLMIEDADRWAPGYAEAGAESVTFHAEASAAPVRLARELRAAGAKAGMALRPATAVEP 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
D++ E+DM+L+MTV PGFGGQ ++ +PKIR+A+ + G ++L+VDGGV I
Sbjct: 125 YLDMLPELDMLLLMTVEPGFGGQAFLDVVLPKIRRARRALDGGPVPLALQVDGGVNRETI 184
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ +AGAD+ V GS+ F +
Sbjct: 185 ERAAEAGADVFVAGSAVFGAE 205
>gi|323705498|ref|ZP_08117073.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535400|gb|EGB25176.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 217
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 131/219 (59%), Gaps = 5/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF L +I + + +H D+MDG FVPNI+ G V+ +L+ ++
Sbjct: 1 MEISPSILSADFGNLLSDIQKVETEKPEYLHIDIMDGHFVPNITIGPLVLNALKGKTEIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I DAG IT H E+ H+ R+L+ I +MG VA+NP T +
Sbjct: 61 FDVHLMIEEPDKYIKEFVDAGAKNITVHQEACVHLDRTLQLIKSMGINASVALNPATSLD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L V+ +DM+LIMTVNPGFGGQ I KIR+ ++ +R ++ +EVDGG+ N
Sbjct: 121 TLRYVLSSVDMVLIMTVNPGFGGQVFINGMYEKIRELASIRNERGLNFKIEVDGGINIDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
IK +V AGAD++V GS F + L L+++AL
Sbjct: 181 IKDVVLAGADVIVAGSFIFANGDP---GENLKKLREAAL 216
>gi|78043975|ref|YP_360308.1| ribulose-phosphate 3-epimerase [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996090|gb|ABB14989.1| ribulose-phosphate 3-epimerase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 219
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL ADFS L + + GAK +H D+MDG FVPN++FG V++SLR+ ++ +
Sbjct: 3 VNIAPSILNADFSNLELVLKQLETGGAKYLHLDIMDGHFVPNLTFGPPVVKSLRAKTNLI 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ +S I +AG D+IT H ES+ H R L+ I GKK G+A+NP T
Sbjct: 63 FDVHLMVEKPESLIEPFIEAGADMITIHWESTRHPHRLLQKIKDSGKKAGIALNPATLPE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
LE ++D ID+ILIM+VNPGFGGQ I + + KIR+ K+++ K + I L VDGG+ +
Sbjct: 123 NLEYLLDLIDLILIMSVNPGFGGQSFINNQLTKIRKVKSMVCKAPQEILLGVDGGINLQT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++AGA+ LV GS F KG++ K L DL
Sbjct: 183 APLVIEAGANFLVTGSFLF--KGDV--IKNLKDL 212
>gi|206603584|gb|EDZ40064.1| Ribulose-phosphate 3-epimerase [Leptospirillum sp. Group II '5-way
CG']
Length = 231
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 138/221 (62%), Gaps = 6/221 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS+LA DF+RLGEE+ I+++GA IH D+MDG FVPN++FG VI ++R +S+
Sbjct: 10 ILIAPSLLAGDFARLGEEVKQISESGADLIHLDIMDGDFVPNLTFGPGVIEAIRPFSNIP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+ D+++ + AG D + H ES H+ R L I MG GVA+NP TP
Sbjct: 70 LEAHLMVWHPDTYLEELKQAGVDRVIVHQESDVHLNRLLHKIRQMGFSPGVALNPSTPAN 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVTSR 181
+LEDV+D +D++L+MTVNPGFGGQ + S KI + + KR S +EVDGG++
Sbjct: 130 LLEDVLDLVDLVLVMTVNPGFGGQAFLSSMREKIARVAMMREKRSGLSFRIEVDGGISPV 189
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +V AGAD LV G++ F Y +N L+ +AL
Sbjct: 190 TAQEVVGAGADTLVAGTAIFRTP---PYKDAVNRLRMAALG 227
>gi|289163956|ref|YP_003454094.1| ribulose-phosphate 3-epimerase [Legionella longbeachae NSW150]
gi|288857129|emb|CBJ10945.1| ribulose-phosphate 3-epimerase [Legionella longbeachae NSW150]
Length = 217
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 130/209 (62%), Gaps = 6/209 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSD 62
+ I+PSIL+AD + LG E+ ++ KAGA IHFDVMD +VPN++FG +L + +
Sbjct: 2 TYHILPSILSADLTCLGAEVDSVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIQRFPQ 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI +D+ I A AG I+ HP+++ H+ RSL I +G + G+ +NP TP
Sbjct: 62 LPIDVHLMIEPVDALIESFAKAGAKRISIHPDATIHLDRSLNLIKDLGCEAGLVLNPATP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +L ++D +LIMTVNPGFGGQ+LI I KI Q + + + L VDGGVT+ N
Sbjct: 122 IEVLTWCAHKLDFVLIMTVNPGFGGQKLIPEIINKIPQIRERYPQ--LDLCVDGGVTTDN 179
Query: 183 IKSLVQAGADLLVVGSSFF---NQKGEIS 208
I +L +AGA+ V GS+ F N K IS
Sbjct: 180 IATLARAGANQFVAGSAVFKSANYKDTIS 208
>gi|300741739|ref|ZP_07071760.1| ribulose-phosphate 3-epimerase [Rothia dentocariosa M567]
gi|300380924|gb|EFJ77486.1| ribulose-phosphate 3-epimerase [Rothia dentocariosa M567]
Length = 239
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 128/219 (58%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADF+ L E+ I+ A A H DVMD FVPN+++G V++ LR S
Sbjct: 2 SVAINPSILSADFANLKHELERISTADAA--HIDVMDNHFVPNLTWGPPVVKRLREVSPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI D AD G + +TFH E++ + RT+ G K G+A+ P T V
Sbjct: 60 PFDVHLMIDDPDRWAPQYADVGSESVTFHAEAATAPIKLARTLRESGAKAGLALRPATAV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D++ EIDM+LIMTV PGFGGQ+ ++ T+PKIR+A + + I L+VDGG+T
Sbjct: 120 EPYLDLLTEIDMLLIMTVEPGFGGQKFLDVTLPKIRRAASALEGSGIPVRLQVDGGITEE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGAD V GSS + + + L L +SA
Sbjct: 180 TIVRAAEAGADCFVAGSSVYGAEDPQTAIAALRSLGESA 218
>gi|317131045|ref|YP_004090359.1| ribulose-phosphate 3-epimerase [Ethanoligenens harbinense YUAN-3]
gi|315469024|gb|ADU25628.1| ribulose-phosphate 3-epimerase [Ethanoligenens harbinense YUAN-3]
Length = 214
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGEE+ I AGA +H DVMDG FVPN++FG V+R+LR +
Sbjct: 2 VKIAPSILSADFSCLGEELQKIEAAGADLVHIDVMDGHFVPNLTFGPPVVRALRGCTPLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ S + DAG D +T H E+ + L +H G +++ P TP
Sbjct: 62 FDVHLMMDDPGSLLGAFLDAGADSVTLHIEACKQPQALLNRLHEAGVGAALSVKPGTPAE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+ +D++ M+L+MTV PGFGGQ+LI T+ K + +R ++L EVDGG+ ++
Sbjct: 122 TVFPFLDQLSMVLVMTVEPGFGGQKLIPETLRKAAAIRQECARRGLALDIEVDGGINAQT 181
Query: 183 IKSLVQAGADLLVVGSSFFN 202
+ VQ+GA++LV GS+ F
Sbjct: 182 AVNAVQSGANVLVAGSAVFG 201
>gi|329946678|ref|ZP_08294090.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328526489|gb|EGF53502.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 229
Score = 168 bits (426), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 134/222 (60%), Gaps = 9/222 (4%)
Query: 7 IVPSILAADFSRLGEEISNIT----KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSIL D + L +E+ +T GA IH DVMD FVPN+S+G V+ ++ +++
Sbjct: 4 IHPSILNCDIAHLADELDRVTGDDGARGADGIHVDVMDNHFVPNLSWGLPVVEAVLAHTA 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D A+AGC ++T H E++ R R +H +G G+A+ P TP
Sbjct: 64 LPVDAHLMICDADRWAPAYAEAGCQVVTPHAEATTAPVRLARELHRLGAGAGIALRPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ + DV+ E D++L+MTV PGFGGQ IE +PKIR+A+ L+G + L +VDGG+T
Sbjct: 124 LEAVADVLGEFDLLLLMTVEPGFGGQSFIEPMLPKIRRARELVGNGGLDLRVQVDGGITP 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I+ +AGAD+ V GS+ + ++ +++L+++A +
Sbjct: 184 QTIERAAEAGADVFVAGSAVYRADDALAA---ISELRQAAFS 222
>gi|281492538|ref|YP_003354518.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
KF147]
gi|281376202|gb|ADA65693.1| Ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
KF147]
gi|326407476|gb|ADZ64547.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
CV56]
Length = 216
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF ++ + AGA +H DVMDG FV N++FGA V+ +LR+ + F
Sbjct: 4 KIAPSILSADFGNFARDVKRLESAGADLVHIDVMDGHFVDNLTFGAGVVSALRAQTHLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + ++ A AG D ++ H E++ HI +L+ I G K V INP TPV
Sbjct: 64 DVHMMVENPEKYVEDFAKAGADSMSIHVEATHHIHGALQKIKNAGMKASVVINPGTPVEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ V+ +DM+L+MTVNPGFGGQ+ I + K+R+ + + + +EVDGG+ + I
Sbjct: 124 IKTVLPLVDMVLVMTVNPGFGGQKFIPEMMDKVRELAQIRTDKKLDFEIEVDGGIDDQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAK-RLN 214
K AGA++ V GS FN + E + K R+N
Sbjct: 184 KVAKAAGANVFVAGSFIFNGEVEKNIEKLRVN 215
>gi|191639662|ref|YP_001988828.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BL23]
gi|190713964|emb|CAQ67970.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BL23]
gi|327383773|gb|AEA55249.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei LC2W]
gi|327386966|gb|AEA58440.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BD-II]
Length = 219
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+A+F+ L ++I I +G +H DVMDG FVPNI+FG ++ L +
Sbjct: 2 SIEIAPSILSANFANLMQDIDKIKDSGIHMLHVDVMDGHFVPNITFGPQMVSDLHKATSL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D A+AG D+I H E+S HI L+ I G + G+ +NP TPV
Sbjct: 62 KLDCHLMIDNPDQFAPQFANAGGDMIMVHLEASAHIYGVLQEIKKAGAQAGLVLNPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
A ++++ +D +L+MTVNPGFGGQ+ I + K+++ L +S +EVDGG+
Sbjct: 122 AAAKELLPLVDQVLVMTVNPGFGGQKFIPQMVNKVQELAKLRDSLGLSFNIEVDGGINDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
IK AGA++ V GS F +S ++L
Sbjct: 182 TIKDCAAAGANVFVAGSYVFGADNPVSRIEKL 213
>gi|189485685|ref|YP_001956626.1| ribulose-phosphate 3-epimerase [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287644|dbj|BAG14165.1| ribulose-phosphate 3-epimerase [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 216
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I+PSIL+ADF+ L ++ I K+GA+ +H DVMDG FVPNI+ G V++SLR ++
Sbjct: 4 IIIIPSILSADFAALKHDLKMIEKSGAEWVHIDVMDGHFVPNITVGPVVVKSLRKETELF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ + + +AG D+ITFH E S ++ + I + G K G++I P+T V+
Sbjct: 64 FDIHLMITNPEKYWRKFKEAGADLITFHSEISAEKKKLVEDIRSSGIKAGISIKPKTSVS 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ ++++LIMTV PGFGGQ +++ + KI+ + +I + + +EVDGG+ SR
Sbjct: 124 EIEALLPYLNLVLIMTVEPGFGGQSFMDNMVAKIKVLRKVIDENNYDCLIEVDGGINSRT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGAD LV GS F + + K
Sbjct: 184 ASICIDAGADALVSGSYIFAAENPLEAVKSF 214
>gi|285017096|ref|YP_003374807.1| ribulose-phosphate 3-epimerase [Xanthomonas albilineans GPE PC73]
gi|283472314|emb|CBA14820.1| probable ribulose-phosphate 3-epimerase protein [Xanthomonas
albilineans]
Length = 222
Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 136/199 (68%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILSADFARLGEEVDAVLRAGADWIHFDVMDNHYVPNLTIGPMVCKALRKHGVTAAI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG +I+FHPE+S H+ RS++ I + G + G+A+NP TP+ I
Sbjct: 66 DVHLMVEPVDRLIPDFAEAGASLISFHPEASRHVHRSIQLIKSHGCQVGLALNPATPLEI 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGGV NI
Sbjct: 126 LDWVLDDLDLVLVMSVNPGFGGQTFIPSALDKLRAIRTCIDASGKPIRLEIDGGVKPENI 185
Query: 184 KSLVQAGADLLVVGSSFFN 202
++ AGAD V GS+ FN
Sbjct: 186 AAVAAAGADTFVAGSAIFN 204
>gi|260794703|ref|XP_002592347.1| hypothetical protein BRAFLDRAFT_240147 [Branchiostoma floridae]
gi|229277565|gb|EEN48358.1| hypothetical protein BRAFLDRAFT_240147 [Branchiostoma floridae]
Length = 228
Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 127/196 (64%), Gaps = 2/196 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL AD S L E + GA +H DVMDG FVPN++FG V++SLR +SD+
Sbjct: 6 SCKIGPSILNADLSNLASEARRLMDCGADYLHLDVMDGHFVPNMTFGHPVVKSLRQHSDA 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H+M++ + I ++DA ++ TFH E++ ++ +R + G + G+ + P+TPV
Sbjct: 66 FFDMHMMVNRPEQWIEGMSDARANLFTFHIEATDDVKGCIRKVKEAGMQVGIGLKPKTPV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ ++++DM+L+MTV PGFGGQ+ + +PK++ +A +S+ +EVDGGV I
Sbjct: 126 EVVFPYVEDVDMVLVMTVEPGFGGQKFMADMMPKVQALRAKY--KSLDIEVDGGVGPSTI 183
Query: 184 KSLVQAGADLLVVGSS 199
+AGA+++V G++
Sbjct: 184 DLAAEAGANMIVSGTA 199
>gi|317124747|ref|YP_004098859.1| ribulose-5-phosphate 3-epimerase [Intrasporangium calvum DSM 43043]
gi|315588835|gb|ADU48132.1| ribulose-5-phosphate 3-epimerase [Intrasporangium calvum DSM 43043]
Length = 218
Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PSIL+ADF+ L E+ I AGA H DVMD FVPN++ G V+ +L S
Sbjct: 1 MQISPSILSADFANLERELGRI--AGADWAHVDVMDAHFVPNLTLGLPVVEALLKVSPIP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D + A+AGC +TFH E++ R R + A G + +A+ P T A
Sbjct: 59 IDAHLMIEDPDRWAPLYAEAGCQSVTFHIEAARDPRELARRLRASGARAAMAMKPRTAFA 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
ED++ E+DM+L+MTV PGFGGQ + +PK+RQ + + + I ++VDGGV++
Sbjct: 119 PYEDLLPELDMVLVMTVEPGFGGQSFMADQMPKVRQVREAVKRHGGEIWVQVDGGVSATT 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I+ +AGAD+ V GS+ + + + +L L
Sbjct: 179 IEQCAEAGADVFVAGSAVYGAEDAAAAVDQLRSL 212
>gi|212691033|ref|ZP_03299161.1| hypothetical protein BACDOR_00523 [Bacteroides dorei DSM 17855]
gi|212666265|gb|EEB26837.1| hypothetical protein BACDOR_00523 [Bacteroides dorei DSM 17855]
Length = 217
Score = 168 bits (425), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F+ L +I I ++ A +H D+MDG FVPNISFG V++ + + D
Sbjct: 6 ISPSLLSANFANLQADIEQINRSDADWLHIDIMDGVFVPNISFGFPVLKYVAELCEKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + I + D G ++ H E+ H+ R ++ I G K V +NP TPVA+L
Sbjct: 66 VHLMIVNPEKFIKEVKDLGTMMMNVHYEACVHLHRVVQQIKDAGMKAAVTLNPSTPVAML 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
D+I ++DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI G +++ +EVDGGV
Sbjct: 126 VDIIRDVDMVLLMSVNPGFGGQKFIVHTLDKVRELRELITNTGSQAL-IEVDGGVNLETG 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+ GAD+LV G++ F RL L
Sbjct: 185 RQLVEVGADVLVAGNAVFKAPDMSDMIHRLKSL 217
>gi|167765899|ref|ZP_02437952.1| hypothetical protein CLOSS21_00390 [Clostridium sp. SS2/1]
gi|317498861|ref|ZP_07957146.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|167712397|gb|EDS22976.1| hypothetical protein CLOSS21_00390 [Clostridium sp. SS2/1]
gi|291559798|emb|CBL38598.1| ribulose-5-phosphate 3-epimerase [butyrate-producing bacterium
SSC/2]
gi|316893857|gb|EFV16054.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 218
Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 125/197 (63%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L +D ++ E+ + K G IH D+ DG FVP ISFGA+ ++ LR ++D V D
Sbjct: 4 ISPSLLNSDTYQIKEQFEALEKCGINYIHIDITDGHFVPMISFGANTVKDLRKHTDFVLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLM+ + ++ I +IADAG DIIT H E++ HI RS++TI GKK G+AINP TPV+++
Sbjct: 64 CHLMVENPENLIPVIADAGADIITVHTEATKHIYRSIQTIKKCGKKAGIAINPGTPVSMI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
++++ D++L MT NPG G+ I S K++ L ++ S ++VDG + +
Sbjct: 124 KEILPMADLVLCMTTNPGVFGESFIPSVADKVKNLCELREQKGYSYQIQVDGSINDQTAI 183
Query: 185 SLVQAGADLLVVGSSFF 201
+AGAD+ V GS F
Sbjct: 184 VCKKAGADIFVSGSYIF 200
>gi|212704412|ref|ZP_03312540.1| hypothetical protein DESPIG_02467 [Desulfovibrio piger ATCC 29098]
gi|212672133|gb|EEB32616.1| hypothetical protein DESPIG_02467 [Desulfovibrio piger ATCC 29098]
Length = 243
Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
+ PS+L+ADFSRL +E++ + AG +H D+MDG FVPNI+FG VI+SLR S +F
Sbjct: 3 LSPSLLSADFSRLADELAALEAAGISWLHLDIMDGAFVPNITFGQPVIKSLRKRSSKLFF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI ++ DAG D++ H E+ H +R+L I +G K G+A NP T +A
Sbjct: 63 DVHLMIEEPARYLESFRDAGADMLVIHAEADRHPQRTLSEIRRLGMKAGLAFNPGTDIAS 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRN 182
L + ++DM+L+M+VNPGF GQ+ I + KIR +A++ G + ++VDGG N
Sbjct: 123 LRWLAPDLDMVLVMSVNPGFSGQKFIPQSFDKIRATRAMLNAAGAGDVLIQVDGGACPEN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
LV GAD+LV GS+FF
Sbjct: 183 TAQLVADGADVLVSGSAFFGH 203
>gi|28378321|ref|NP_785213.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum WCFS1]
gi|28271156|emb|CAD64061.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum WCFS1]
Length = 217
Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 128/216 (59%), Gaps = 7/216 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L ++ AGA +H DVMDG FVPN+SFG + LR + +
Sbjct: 2 IKVAPSILSADFANLQRDVQMAENAGADALHIDVMDGQFVPNLSFGMSTVADLRPVTSLM 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + + A AG D+I H ES+ HI +L+ I G K V +NP TP++
Sbjct: 62 LDCHLMIMDPERFVGQFAKAGADLIGVHVESTRHIYHALQLIKDAGVKAEVVVNPGTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSR 181
++ +++ +D +LIMTVNPGFGGQ ++ + KI + K G R +EVDGG+ +
Sbjct: 122 MISELLPLVDQVLIMTVNPGFGGQHFLDQMVAKIAALNELKQQHGYR-FEIEVDGGINDQ 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K+ AGA + V GS ++ A+R+ DLK
Sbjct: 181 TVKACYDAGATVAVAGSYVYDSADP---AQRIQDLK 213
>gi|315453853|ref|YP_004074123.1| ribulose-phosphate 3-epimerase [Helicobacter felis ATCC 49179]
gi|315132905|emb|CBY83533.1| ribulose-phosphate 3-epimerase [Helicobacter felis ATCC 49179]
Length = 211
Score = 167 bits (424), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 126/200 (63%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PS+L+ADF RL E + + +A H DVMDG FVPN++FG V+++L+ Y ++
Sbjct: 1 MQIAPSLLSADFMRLQESLHPLQQADF--FHIDVMDGHFVPNLTFGPCVLKNLKQYYNTP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ D IT H E++PH+ RS+ I ++G K G+++NP T +
Sbjct: 59 LDVHLMVENPLFFIDLYKDLQPAFITLHIENTPHLHRSVHYIKSLGIKAGLSLNPATSLE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ +I ++D++L+M+VNPGFGGQ+ + + K++ K LEVDGG+ +N
Sbjct: 119 GLDYIIQDLDLVLLMSVNPGFGGQKFLPLVLDKLQAFKKRFPNYQGVLEVDGGINLQNAS 178
Query: 185 SLVQAGADLLVVGSSFFNQK 204
L GA+LLVVGS FN +
Sbjct: 179 LLASCGANLLVVGSYLFNHQ 198
>gi|241895663|ref|ZP_04782959.1| ribulose-phosphate 3-epimerase [Weissella paramesenteroides ATCC
33313]
gi|241871030|gb|EER74781.1| ribulose-phosphate 3-epimerase [Weissella paramesenteroides ATCC
33313]
Length = 219
Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 124/202 (61%), Gaps = 2/202 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSILAAD+ L ++S + AGA+ +H DVMDG FVP I++G + +++LR S
Sbjct: 2 TIKVAPSILAADYLNLARDVSVVENAGAELLHIDVMDGSFVPAIAYGPNWVKALRKVSKM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM + +I+ A AG DII H E++ HI R+L+ I A G K V INP T V
Sbjct: 62 TLDVHLMAVDPERYIDEFAAAGADIIGVHYEATNHIHRALQQIKAHGIKAEVVINPGTAV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+++E V+ +D +L+MTVNPGFGGQQ + I KI L ++ + +E+DGG +
Sbjct: 122 SVIEPVLYMVDQVLVMTVNPGFGGQQFLPEMIEKIAILDKLKREKGYTFDIEIDGGANDQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
K AGA + V GS F++
Sbjct: 182 TTKMAYDAGATVAVAGSYVFDK 203
>gi|300767257|ref|ZP_07077169.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180471|ref|YP_003924599.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|300495076|gb|EFK30232.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045962|gb|ADN98505.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 217
Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L ++ AGA +H DVMDG FVPN+SFG + LR + +
Sbjct: 2 IKVAPSILSADFANLQRDVQMAENAGADALHIDVMDGQFVPNLSFGMSTVADLRPVTSLM 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + + A AG D+I H ES+ HI +L+ I G K V +NP TP++
Sbjct: 62 LDCHLMIMDPERFVGQFAKAGADLIGVHVESTRHIYHALQLIKDAGVKAEVVVNPGTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ +++ +D +LIMTVNPGFGGQ ++ + KI L + +EVDGG+ +
Sbjct: 122 MISELLPLVDQVLIMTVNPGFGGQHFLDQMVAKIAALNELKQQHGYQFEIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K+ AGA + V GS ++ A+R+ DLK
Sbjct: 182 VKACYDAGATVAVAGSYVYDSADP---AQRIQDLK 213
>gi|254556529|ref|YP_003062946.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum JDM1]
gi|254045456|gb|ACT62249.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum JDM1]
Length = 217
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L ++ AGA +H DVMDG FVPN+SFG + LR + +
Sbjct: 2 IKVAPSILSADFANLQRDVQMAENAGADALHIDVMDGQFVPNLSFGMSTVADLRPVTSLM 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + + A AG D+I H ES+ HI +L+ I G K V +NP TP++
Sbjct: 62 LDCHLMIMDPERFVGQFAKAGADLIGVHVESTRHIYHALQLIKDAGVKAEVVVNPGTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ +++ +D +LIMTVNPGFGGQ ++ + KI L + +EVDGG+ +
Sbjct: 122 MISELLPLVDQVLIMTVNPGFGGQHFLDQMVAKIAALNELKQQHGYQFEIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K+ AGA + V GS ++ A+R+ DLK
Sbjct: 182 VKACYDAGATVAVAGSYVYDSADP---AQRIQDLK 213
>gi|317121763|ref|YP_004101766.1| ribulose-5-phosphate 3-epimerase [Thermaerobacter marianensis DSM
12885]
gi|315591743|gb|ADU51039.1| ribulose-5-phosphate 3-epimerase [Thermaerobacter marianensis DSM
12885]
Length = 285
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 134/204 (65%), Gaps = 4/204 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
++PS+L+ADF+RL E++ +AGA +H DVMDG FVPN++FG +I ++R + D
Sbjct: 64 VLPSLLSADFTRLAEQVKAAEEAGAAGLHLDVMDGRFVPNLTFGPLIIAAVRRLTALPLD 123
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + + +A AG D+IT H E++PH+ R+++ I A+G + GVA+NP TP A +
Sbjct: 124 VHLMVERPEGLLAAVAQAGADLITVHVEATPHVHRAVQMIRALGCRAGVALNPGTPAAAV 183
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
E ++ E+D+IL+M+VNPGF GQ + + K+R +A++ G R LEVDGG+ +
Sbjct: 184 EPLLGEVDLILVMSVNPGFAGQAFLPLALDKLRTLRAMLPAAGPRPW-LEVDGGIDPKTA 242
Query: 184 KSLVQAGADLLVVGSSFFNQKGEI 207
AGADLLV GSS FN + +
Sbjct: 243 PLAAAAGADLLVAGSSVFNDRAPV 266
>gi|116874024|ref|YP_850805.1| ribulose-phosphate 3-epimerase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742902|emb|CAK22026.1| ribulose-phosphate 3-epimerase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 214
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 122/197 (61%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMETSIKEAEHAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++ ++D++L MTVNPGFGGQ I+STI + + S +EVDGG+ + +
Sbjct: 124 DAILADVDLVLQMTVNPGFGGQAFIDSTIQNMCYLDNWRRENHGSYVIEVDGGINAETAE 183
Query: 185 SLVQAGADLLVVGSSFF 201
QAG D+LV GS FF
Sbjct: 184 KCKQAGVDILVAGSYFF 200
>gi|67901202|ref|XP_680857.1| hypothetical protein AN7588.2 [Aspergillus nidulans FGSC A4]
gi|40742978|gb|EAA62168.1| hypothetical protein AN7588.2 [Aspergillus nidulans FGSC A4]
gi|259483910|tpe|CBF79684.1| TPA: ribulose-phosphate 3-epimerase (AFU_orthologue; AFUA_2G15190)
[Aspergillus nidulans FGSC A4]
Length = 252
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 136/247 (55%), Gaps = 35/247 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S GA +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFATLGSECSTKISEGADWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
FDCH+MI+ + DAGCD+ FH P R
Sbjct: 61 VHRPSQPQGKGTFDCHMMIAEPQKWVKDFKDAGCDLYCFHYEAAVSSVAAKEPADKETTR 120
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
++ +R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 KTSPKELIRFIHEEGMQAGIAIKPDTPVDVLWDILAADDEKERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ S +PK+ KAL K +++EVDGG+ I +AGA+++V GS+ F +
Sbjct: 181 FMASELPKV---KALREKYPDLNIEVDGGLGLGTIDQAAEAGANVIVAGSAVFGAENPGD 237
Query: 209 YAKRLND 215
++L D
Sbjct: 238 VIQKLRD 244
>gi|15673906|ref|NP_268081.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
Il1403]
gi|12724963|gb|AAK06022.1|AE006423_1 ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
Il1403]
Length = 216
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 129/212 (60%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF ++ + AGA +H DVMDG FV N++FGA V+ +LR + F
Sbjct: 4 KIAPSILSADFGNFARDVKRLESAGADLVHIDVMDGHFVDNLTFGAGVVSALRVQTHLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + ++ A AG D ++ H E++ HI +L+ I G K V INP TPV
Sbjct: 64 DVHMMVENPEKYVEDFAKAGADSMSIHVEATHHIHGALQKIKNAGMKASVVINPGTPVEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ V+ +DM+L+MTVNPGFGGQ+ I + K+R+ + + + +EVDGG+ + I
Sbjct: 124 IKTVLPLVDMVLVMTVNPGFGGQKFIPEMMDKVRELAQIRTDKKLDFEIEVDGGIDDQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAK-RLN 214
K AGA++ V GS FN + E + K R+N
Sbjct: 184 KVAKAAGANVFVAGSFIFNGEVEKNIEKLRVN 215
>gi|296127820|ref|YP_003635072.1| ribulose-phosphate 3-epimerase [Brachyspira murdochii DSM 12563]
gi|296019636|gb|ADG72873.1| ribulose-phosphate 3-epimerase [Brachyspira murdochii DSM 12563]
Length = 216
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 127/198 (64%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL A FS L I + +AG+ +H D+MDG FVP I+FGA ++ ++ S
Sbjct: 4 IMIAPSILTASFSNLENTIKELEEAGSDYLHLDIMDGVFVPQITFGAKIVSDIKKASRIP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + HI+ A AG DII+ H E + HI R + I A K G+ +NP T V
Sbjct: 64 LDVHLMIVNPEKHIDDFAKAGADIISVHYEGNIHIHRLIYQIKAHNIKAGIVLNPHTRVD 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E +ID+ID ILIM+VNPGFGGQ+ IES++ KI++AK LIG R I L VDGG+
Sbjct: 124 FIEPIIDDIDYILIMSVNPGFGGQKFIESSVKKIKEAKKLIGNRDIVLAVDGGINLNTCN 183
Query: 185 SLVQAGADLLVVGSSFFN 202
+++AGA+ LV GS+ +
Sbjct: 184 MVIEAGANFLVAGSAIID 201
>gi|227513471|ref|ZP_03943520.1| ribulose-phosphate 3-epimerase [Lactobacillus buchneri ATCC 11577]
gi|227083344|gb|EEI18656.1| ribulose-phosphate 3-epimerase [Lactobacillus buchneri ATCC 11577]
Length = 217
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I SIL+AD+ L +I + K GA+ +H D+MDG FVP +S+G +++++ ++
Sbjct: 2 IKIATSILSADYVNLQRDIEKVDKGGAELLHIDIMDGAFVPALSYGPGWVKAIKPITNLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + + +I+ ADAG DII H E++PHI R+L+ I K V INP TPV+
Sbjct: 62 LDVHMMVQNPERYIDDFADAGADIIGVHKEATPHIHRALQMIKNRNVKAEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ+ + T+ KI + + ++ ++ +E+DGGV
Sbjct: 122 AITPVLYMVDQVLVMTVNPGFGGQKFLPETVKKITELDKIKKEQGLNFDIEIDGGVNETT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS FN + K L D
Sbjct: 182 VVGAYKAGATVAVAGSYIFNADDPVLKIKALKD 214
>gi|311113843|ref|YP_003985065.1| ribulose-phosphate 3-epimerase [Rothia dentocariosa ATCC 17931]
gi|310945337|gb|ADP41631.1| ribulose-phosphate 3-epimerase [Rothia dentocariosa ATCC 17931]
Length = 239
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 127/218 (58%), Gaps = 4/218 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADF+ L E+ I+ A A H DVMD FVPN+++G V++ LR S
Sbjct: 2 SVAINPSILSADFANLQHELERISTADAA--HIDVMDNHFVPNLTWGPPVVKRLREVSPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI D AD G + +TFH E++ + RT+ G K G+A+ P T V
Sbjct: 60 PFDVHLMIDDPDRWAPQYADVGSESVTFHAEAATAPIKLARTLRESGAKAGLALRPATAV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D++ EIDM+LIMTV PGFGGQ+ ++ T+PKIR+A + + I L+VDGG+T
Sbjct: 120 EPYLDLLTEIDMLLIMTVEPGFGGQKFLDVTLPKIRRAASALEGSGIPVRLQVDGGITEE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I +AGAD V GSS + + + L L +S
Sbjct: 180 TIVRAAEAGADCFVAGSSVYGAEDPQTAIAALRSLGES 217
>gi|328948720|ref|YP_004366057.1| ribulose-phosphate 3-epimerase [Treponema succinifaciens DSM 2489]
gi|328449044|gb|AEB14760.1| ribulose-phosphate 3-epimerase [Treponema succinifaciens DSM 2489]
Length = 211
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 132/203 (65%), Gaps = 4/203 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L+ADFS L I + G+ +H DVMDG FVP +S+G VI S+R + FD H
Sbjct: 10 PSLLSADFSDLTSAFKFIEEKGSSFVHVDVMDGHFVPQVSYGQPVISSIRKCTKLPFDVH 69
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI ++ I ++G D +TFH E++ H R ++ +H GKK G+A+ P TP++ +E+
Sbjct: 70 LMIERPENSIVSYIESGADFVTFHIEATCHADRCVQLVHDAGKKAGIALCPATPLSAVEE 129
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
++ +D++L+M+VNPG+GGQ+LI TI KIR+ + +++ + VDGG+ ++ +
Sbjct: 130 LLPFVDIVLVMSVNPGWGGQKLIPYTIEKIRKLADIQREKNFKYLISVDGGINQETLEDV 189
Query: 187 VQAGADLLVVGSSFFNQKGEISY 209
++AG D++V GSSFF +G + +
Sbjct: 190 LEAGTDIVVSGSSFF--RGNLEW 210
>gi|309776527|ref|ZP_07671508.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308915704|gb|EFP61463.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 221
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ D+SR E++ + ++ AK +HFDVMDG FVPN++FG D+++ + + V D
Sbjct: 6 IAPSILSLDYSRTSEQLKELDESNAKWMHFDVMDGHFVPNLTFGPDLLKGFKKAVNMVMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINPETPV 123
H+M+ + D I A AG DIITFH E+ + L R I AMG + GV++ P+T V
Sbjct: 66 VHIMVDNPDMVSEIFAKAGADIITFHLEAVKDMDACLELCRKIRAMGVQAGVSVKPKTGV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L + EID+ILIM+V PGFGGQ +E T+ K+R + I K + +E+DGG+
Sbjct: 126 EGLLAHLKEIDLILIMSVEPGFGGQSFMEDTLEKVRVLREQIEKEGLDTRIEIDGGINKE 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
K V AG D LV GS F
Sbjct: 186 TAKLAVAAGVDTLVAGSYVFKN 207
>gi|34556662|ref|NP_906477.1| ribulose-phosphate 3-epimerase [Wolinella succinogenes DSM 1740]
gi|34482376|emb|CAE09377.1| RIBULOSE-PHOSPHATE 3-EPIMERASE PENTOSE-5-PHOSPHATE 3-EPIMERASE PPE
R5P3E [Wolinella succinogenes]
Length = 213
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 128/197 (64%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF +L E+ +I +AG +H DVMDG FVPN++ G V+++++ + D
Sbjct: 3 VAPSILSADFGKLSLEVGSICEAGCDYVHVDVMDGHFVPNLTMGPLVVQAVKKAATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A + ++FH E H+ R ++ G + VA+NP T ++L
Sbjct: 63 IHLMVQNNPFFVDLFAPLEPEFLSFHIEEEKHLHRLIQQTRKHGIRPAVALNPHTDESLL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E ++ +IDM+L+M+VNPGFGGQ+ I S + KIR+ K I +R+ S +EVDGGV+ +NI
Sbjct: 123 EYILSDIDMVLVMSVNPGFGGQKFIPSALEKIRRLKERIERRNPSCLIEVDGGVSDQNIH 182
Query: 185 SLVQAGADLLVVGSSFF 201
+L +AG D++V GS F
Sbjct: 183 ALKEAGVDMVVAGSYLF 199
>gi|167753260|ref|ZP_02425387.1| hypothetical protein ALIPUT_01532 [Alistipes putredinis DSM 17216]
gi|167659191|gb|EDS03321.1| hypothetical protein ALIPUT_01532 [Alistipes putredinis DSM 17216]
Length = 208
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 125/194 (64%), Gaps = 2/194 (1%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+L+ADF L + I ++ A+ +H DVMDG FVPNISFG V++++R + + D HLM
Sbjct: 1 MLSADFGHLERDTQMIDRSAAEWVHIDVMDGVFVPNISFGFPVMKAIRKATSKLLDVHLM 60
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
I + ++ A+AG I+TFH E++ + + + IH G K GV+I P T V +L D++
Sbjct: 61 IVEPEKYVTRFAEAGAGIVTFHYEATLNPKGCIDLIHRAGAKAGVSIKPATSVEVLRDIV 120
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQ 188
ID++L+M+V PGFGGQ + ++ KIR+ +A+I + + +EVDGG+++ N + L
Sbjct: 121 PLIDLVLVMSVEPGFGGQSFMPDSLEKIRELRAMIDETESTAVIEVDGGISAHNSRLLFD 180
Query: 189 AGADLLVVGSSFFN 202
AGAD LV GS+ F
Sbjct: 181 AGADALVAGSAVFG 194
>gi|322436943|ref|YP_004219155.1| ribulose-phosphate 3-epimerase [Acidobacterium sp. MP5ACTX9]
gi|321164670|gb|ADW70375.1| ribulose-phosphate 3-epimerase [Acidobacterium sp. MP5ACTX9]
Length = 226
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 122/199 (61%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ SILA+DF+ L +EI+ + G +H DVMDG FVPNI+FG V+ ++R +
Sbjct: 2 IELAFSILASDFAHLADEIATAERGGGTIVHVDVMDGHFVPNITFGPPVVAAIRPLTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + DS I A AG DI+ H E H+ R+L+ I G + V INP TPV
Sbjct: 62 LDCHLMIENPDSFIEDFAKAGADILCVHQEVCRHLHRTLQLIQQHGCQPAVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L +V+ + +L+M+VNPGFGGQ+ + + KI L + ++ +EVDGGV
Sbjct: 122 TLIEVLPMLHHVLVMSVNPGFGGQKFLPLALDKIEHLAELREEMGLNFRIEVDGGVAHDT 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
+ +V+AGAD+LV GS+ F
Sbjct: 182 VARVVEAGADMLVAGSAIF 200
>gi|227486013|ref|ZP_03916329.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
gi|227236058|gb|EEI86073.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
Length = 218
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI AADF L EI + + G K IH D+MDG FV ++FG D I++++S +D D
Sbjct: 5 IAPSIFAADFGNLKSEIKKMEENGIKLIHLDIMDGHFVEKMAFGPDHIKAIKSMTDIPID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + I + +AG DIIT H ESS + L I G K G+ ++P+T L
Sbjct: 65 VHLMVDKPERIIGSVIEAGADIITLHVESSVRLNSCLEKIKRSGSKAGLVLSPQTSEETL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ ++D ID++LIMT+NPG + I KI+ K +IG R I +EVDG + NIK
Sbjct: 125 KYMLDNIDLVLIMTINPGEANLGFNRNMIQKIKNTKKMIGDRDILIEVDGSIDDNNIKYC 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA++ VVGS FN G+ Y LN+LK+
Sbjct: 185 KKAGANIFVVGSYLFN--GDFIY--NLNNLKRK 213
>gi|124516656|gb|EAY58164.1| Ribulose-phosphate 3-epimerase [Leptospirillum rubarum]
Length = 231
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 136/221 (61%), Gaps = 6/221 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS+LA DF+RLGEE+ I+ +GA IH DVMDG FVPN++FG VI ++R YS
Sbjct: 10 ILIAPSLLAGDFARLGEEVKQISHSGADLIHLDVMDGDFVPNLTFGPGVIEAIRPYSSIP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+ D+++ + AG D + H ES H+ R L I MG GVA+NP +P
Sbjct: 70 LEAHLMVWHPDTYLEELKQAGVDRVIVHQESDVHLNRLLHQIRQMGFSPGVALNPSSPAN 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVTSR 181
+LEDV+D +D++L+MTVNPGFGGQ + S KI + + R S +EVDGG++
Sbjct: 130 LLEDVLDLVDLVLVMTVNPGFGGQAFLSSMREKIAKVAKMRENRSGLSFRIEVDGGISPA 189
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +V AGAD+LV G++ F Y ++ L+ +AL
Sbjct: 190 TAEEVVDAGADILVAGTAVFRNP---PYTDAVHRLRMAALG 227
>gi|257051918|ref|YP_003129751.1| ribulose-phosphate 3-epimerase [Halorhabdus utahensis DSM 12940]
gi|256690681|gb|ACV11018.1| ribulose-phosphate 3-epimerase [Halorhabdus utahensis DSM 12940]
Length = 216
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 8/214 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAADF+ L ++ + A + +H DVMDG FVPNISFG VI SLR +D F
Sbjct: 3 RIAPSILAADFADLYGDVRQVESA--EILHLDVMDGHFVPNISFGPPVISSLRERTDLYF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI ++ +AG D +T H ES + +IH G G+A+NP+T V
Sbjct: 61 DTHLMIEHPSEYVEAFQNAGADRLTVHVESEDDPGAVIESIHDHGMDAGIALNPDTDVGR 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E +D+++++L+M+V PGFGGQ + T+ +I + A+ + +EVDGGV S
Sbjct: 121 VEPYLDDVEVVLVMSVQPGFGGQSFMPKTLDRIERLDAM---GAAEIEVDGGVNSETGPK 177
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V+AGA+ LV+GSS F Q A+ L DL++S
Sbjct: 178 CVEAGAETLVIGSSLFGQS---DVARALADLRES 208
>gi|296269349|ref|YP_003651981.1| ribulose-phosphate 3-epimerase [Thermobispora bispora DSM 43833]
gi|296092136|gb|ADG88088.1| ribulose-phosphate 3-epimerase [Thermobispora bispora DSM 43833]
Length = 219
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 134/219 (61%), Gaps = 3/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + + + A +H DVMD FVPN++ G V+ +L +
Sbjct: 2 AVQIAPSILSADFARLAEEAARV-EGVADWLHVDVMDNHFVPNLTIGLPVVEALLRSTSI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H E++ + R+LR I A G + G+A+NP TPV
Sbjct: 61 PLDCHLMIEDPDRWAPGYAEAGAASVTIHAEAAKAVIRTLRAIRAAGARAGLALNPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
ED++ EIDM+L+MTV PGFGGQ+ ++ +PK+ +A+ALI K + L+VDGGV+
Sbjct: 121 EAYEDLLPEIDMLLVMTVEPGFGGQRFLDIMLPKVARARALIDKHGGEVWLQVDGGVSEE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ AGAD+ V GS+ + + L L + A
Sbjct: 181 TIERCAAAGADVFVAGSAVYGSSDPAKAVRHLRALAERA 219
>gi|154249667|ref|YP_001410492.1| ribulose-phosphate 3-epimerase [Fervidobacterium nodosum Rt17-B1]
gi|154153603|gb|ABS60835.1| Ribulose-phosphate 3-epimerase [Fervidobacterium nodosum Rt17-B1]
Length = 212
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 126/197 (63%), Gaps = 3/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SILAAD SRL EE+ + K +IH DVMDG FVPN++FG +I +LR+++D D
Sbjct: 4 ISASILAADLSRLKEELERV-KPFIDEIHLDVMDGHFVPNLTFGYPMIETLRTFTDLPID 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+++ D HI + + G +T H E+ H+ RS+ I ++G + VAINP T + L
Sbjct: 63 AHLMVTNPDDHIKLFIEKGATRVTIHQETCYHLHRSVELIKSLGAEAFVAINPATSIYTL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNIK 184
E+++ D IL+MTVNPGF GQ+ I + + KI++ + +R++S + VDGGV + N +
Sbjct: 123 EEILSYADGILVMTVNPGFSGQKFIPTMMEKIKRLNEIRKERNLSFKIAVDGGVGNSNAQ 182
Query: 185 SLVQAGADLLVVGSSFF 201
L+ G ++LV+G F
Sbjct: 183 DLINIGVNILVMGYGVF 199
>gi|260437311|ref|ZP_05791127.1| ribulose-phosphate 3-epimerase [Butyrivibrio crossotus DSM 2876]
gi|292810223|gb|EFF69428.1| ribulose-phosphate 3-epimerase [Butyrivibrio crossotus DSM 2876]
Length = 219
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 128/198 (64%), Gaps = 6/198 (3%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+L+ADF+++GE++ I AG + +H D+MDG FVP+ISFG V+ S+R +D +FD H
Sbjct: 7 PSMLSADFTKVGEQLKIIENAGNEMLHVDIMDGMFVPSISFGMPVVESIRPCTDMIFDVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
+M+ + +I ++ +G DII+ H E+ +I +L I G K +AINPETP+ L
Sbjct: 67 MMVVDPERYIEVVRKSGADIISIHVEACKNIIDTLLKIRETGAKPAIAINPETPMDTLRP 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKI----RQAKALIGKRSISLEVDGGVTSRNIK 184
+ +D +++M+V+PGFGGQ IE + +I R K L S ++EVDGG+ N++
Sbjct: 127 YLQYVDEVVVMSVHPGFGGQSFIEESFERICELDRMRKDL--GLSFAIEVDGGIKLDNVE 184
Query: 185 SLVQAGADLLVVGSSFFN 202
+++ GAD++V GS+ F
Sbjct: 185 KVLKCGADIIVAGSAVFK 202
>gi|320105769|ref|YP_004181359.1| ribulose-phosphate 3-epimerase [Terriglobus saanensis SP1PR4]
gi|319924290|gb|ADV81365.1| ribulose-phosphate 3-epimerase [Terriglobus saanensis SP1PR4]
Length = 222
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 127/221 (57%), Gaps = 2/221 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ SILAADF L +EI+ + G H DVMDG FVPNI+FG V+ ++R +
Sbjct: 2 IELAFSILAADFGHLADEIALAERGGGTVCHIDVMDGHFVPNITFGPPVVAAVRKITALP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D +I A AG + ++ E H+ R++ I G + GV INP TPV
Sbjct: 62 LDCHLMIEDPDRYIPAFATAGANWVSVQQEVCRHLHRTIMLITEHGMEAGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +V+ + +L+MTVNPGFGGQ I + K+ L K ++ +EVDGGV
Sbjct: 122 TIVEVLPLLHHVLVMTVNPGFGGQSFIPRCVEKVAHLADLRQKMGLNFRIEVDGGVADST 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ S+V+AGA+LLV GS+ F + A+ L ++A A+
Sbjct: 182 VASVVEAGAELLVAGSAIFQENKTEQNAREFLRLARAAGAV 222
>gi|325849049|ref|ZP_08170541.1| ribulose-phosphate 3-epimerase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480294|gb|EGC83357.1| ribulose-phosphate 3-epimerase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 220
Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 129/202 (63%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+A+FS L ++ + K K +H D+MDG FVPNISFG +I+S+R +D +
Sbjct: 2 VEISPSVLSANFSNLQNDLDQLKKTKVKYLHLDIMDGKFVPNISFGFPIIKSIREDNDFI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I+ +G D+IT H E+ ++ ++ I G K G++ P+T +
Sbjct: 62 FDTHLMIDEPIRYIDQFKKSGADLITVHYEACSNLDETIEKIKNSGLKVGLSFKPKTDIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +++ID+ L+M+V PGFGGQ IE +I KI++ ++ I ++S +EVDGG+ N
Sbjct: 122 KIIPYLEKIDLCLVMSVEPGFGGQSFIEDSIGKIQKLRSYIDDNNLSCLIEVDGGIKDHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+K ++ AG D++V GS F+ K
Sbjct: 182 LKKVIDAGVDVVVSGSDIFSHK 203
>gi|222099880|ref|YP_002534448.1| Ribulose-phosphate 3-epimerase [Thermotoga neapolitana DSM 4359]
gi|221572270|gb|ACM23082.1| Ribulose-phosphate 3-epimerase [Thermotoga neapolitana DSM 4359]
Length = 221
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 129/211 (61%), Gaps = 7/211 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA D +RL +E+ + + +HFDVMDG FVPNISFG V+++LR +
Sbjct: 3 VKIAASILACDLARLADEVKRVEEH-IDMVHFDVMDGHFVPNISFGLPVLKALRKETSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI++ + +++ + G D++ H E++PH+ R + I +G K VA+NP TPV
Sbjct: 62 ISVHLMITNPEDYVDRFVEEGADMVAVHYETTPHLHRIVHRIKDLGAKAFVALNPHTPVF 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE----VDGGVTS 180
+L ++I ++D +L+M+VNPGF GQ+ I ++ KIR K +I R + LE VDGGV
Sbjct: 122 LLSEIITDVDGVLVMSVNPGFSGQRFIARSLEKIRSLKKMI--RDLGLETEIMVDGGVNE 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
N L++ GA +LV+G F + + +
Sbjct: 180 ENASILIKNGATILVMGYGIFKNENYVELVR 210
>gi|313901539|ref|ZP_07834984.1| ribulose-5-phosphate 3-epimerase [Thermaerobacter subterraneus DSM
13965]
gi|313468200|gb|EFR63669.1| ribulose-5-phosphate 3-epimerase [Thermaerobacter subterraneus DSM
13965]
Length = 286
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 137/215 (63%), Gaps = 6/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
++PS+L+ADF+RL EE+ GA +H DVMDG FVPN++FG ++ ++R + D
Sbjct: 58 VLPSLLSADFTRLAEEVRAAEAGGAAGLHLDVMDGRFVPNLTFGPMIVAAVRRLTRLPLD 117
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ + +A AG D+IT H E++PH+ R+++ I A+G + GVA+NP TP +
Sbjct: 118 VHLMVERPEALLPAVAQAGADVITVHVEATPHVHRAVQMIRALGCRAGVALNPGTPAVAV 177
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
E ++ E+D+IL+M+VNPGFGGQ + + K+R +A++ G R LEVDGG+
Sbjct: 178 EPLLGEVDLILVMSVNPGFGGQAFLPLALDKLRALRAMLPAAGPRPW-LEVDGGIDPATA 236
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AGADLLV GS+ +N G+ L+ L++
Sbjct: 237 PLAAAAGADLLVAGSAVYN--GQAPVGTNLHRLRQ 269
>gi|195953259|ref|YP_002121549.1| Ribulose-phosphate 3-epimerase [Hydrogenobaculum sp. Y04AAS1]
gi|195932871|gb|ACG57571.1| Ribulose-phosphate 3-epimerase [Hydrogenobaculum sp. Y04AAS1]
Length = 219
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
+ PSIL+A+F LG++I K GA IHFDVMDG FVPNI+ G V+ L+ +V F
Sbjct: 4 LAPSILSANFWNLGKDIEATLKGGADIIHFDVMDGAFVPNITVGPYVLECLKEKLPNVTF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI++ D++I +AG +++ H E+ PHI R++ I +G K GVAINP T +
Sbjct: 64 DAHLMINNPDAYIKEFVEAGASMVSVHIENVPHIHRTVELIKTLGAKAGVAINPGTSLDS 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+++++ D IL+M+VNPGFGGQ I+ +I + + K I ++ ++ +E+DGG+ N+
Sbjct: 124 IDEIVHYADYILLMSVNPGFGGQSFIDRSIVRAKSLKQRILEKGLNCLVEMDGGLKFNNL 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+ D+ V+GS F +K S +++ D
Sbjct: 184 -HLVKEYVDIFVIGSGIFKEKDIESITRKIKDF 215
>gi|227515686|ref|ZP_03945735.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum ATCC 14931]
gi|227085934|gb|EEI21246.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum ATCC 14931]
Length = 222
Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 131/216 (60%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + K GA+ +H DVMDG FVP+IS+G ++++R S V
Sbjct: 7 IKVAPSILSADYVNLQKDIEMVEKGGAEVLHIDVMDGSFVPSISYGPGFVKAIRPISKMV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + DAG DII E++ HI R+L+ I G K V INP TPV
Sbjct: 67 LDVHLMVQNPEHILPDFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVD 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ V+ +D +L+MTVNPGFGGQ+ + T+ KI + AL + +E+DGGV +
Sbjct: 127 MIKPVLHMVDQVLVMTVNPGFGGQKFLPETVAKIAELDALKKELGYDFDIEIDGGVNDQT 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA + V GS F+ + ++ ++ D K
Sbjct: 187 VVDCYKAGATVAVAGSFVFDNEDPVAQINKIKDATK 222
>gi|223984321|ref|ZP_03634463.1| hypothetical protein HOLDEFILI_01757 [Holdemania filiformis DSM
12042]
gi|223963678|gb|EEF68048.1| hypothetical protein HOLDEFILI_01757 [Holdemania filiformis DSM
12042]
Length = 215
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 7/202 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ DFS+L ++ + + A+ +H+DVMDG FVPN++FG D++++ R +D D
Sbjct: 4 ISPSILSLDFSQLNSQMDAVNASRAQWLHYDVMDGHFVPNLTFGPDILKAFRKLTDRQLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAINPETPV 123
HLMIS + + A AG ITFH E+ + R + + A+G K G++I P+TPV
Sbjct: 64 VHLMISDPRKYAPVFAQAGAQWITFHYEAMNDAQDCRALAKELRALGVKPGISIKPQTPV 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTS 180
++LE + + D++L+M+V PGFGGQQ S + KI RQ G + +EVDGG+ +
Sbjct: 124 SVLEALWQDFDLVLVMSVEPGFGGQQFDPSALDKITVLRQWAQAAGA-DLRIEVDGGINA 182
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
K +AGAD+LV GS F
Sbjct: 183 ETGKLCREAGADVLVAGSYIFK 204
>gi|184155722|ref|YP_001844062.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum IFO 3956]
gi|260663561|ref|ZP_05864451.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum 28-3-CHN]
gi|183227066|dbj|BAG27582.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum IFO 3956]
gi|260552102|gb|EEX25155.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum 28-3-CHN]
Length = 217
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 131/216 (60%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + K GA+ +H DVMDG FVP+IS+G ++++R S V
Sbjct: 2 IKVAPSILSADYVNLQKDIEMVEKGGAEVLHIDVMDGSFVPSISYGPGFVKAIRPISKMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + DAG DII E++ HI R+L+ I G K V INP TPV
Sbjct: 62 LDVHLMVQNPEHILPDFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ V+ +D +L+MTVNPGFGGQ+ + T+ KI + AL + +E+DGGV +
Sbjct: 122 MIKPVLHMVDQVLVMTVNPGFGGQKFLPETVAKIAELDALKKELGYDFDIEIDGGVNDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA + V GS F+ + ++ ++ D K
Sbjct: 182 VVDCYKAGATVAVAGSFVFDNEDPVAQINKIKDATK 217
>gi|147678114|ref|YP_001212329.1| pentose-5-phosphate-3-epimerase [Pelotomaculum thermopropionicum
SI]
gi|146274211|dbj|BAF59960.1| pentose-5-phosphate-3-epimerase [Pelotomaculum thermopropionicum
SI]
Length = 224
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 139/221 (62%), Gaps = 5/221 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+A+F+ L E++ +AGA+ +H DVMDG FVPN++ G V+ +L+
Sbjct: 2 IKLAPSILSANFAALLEDVLKAEEAGAEYLHIDVMDGHFVPNLTVGPLVVEALKGRCRMC 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D I+ AG D++T H E+ H+ R+L TI G K GVA+NP T
Sbjct: 62 LDVHLMIENPDVFIDRFIAAGADLVTVHAEACRHLHRTLSTIKEKGAKAGVALNPATSPR 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
++E ++ D++L+MTVNPGFGGQQ I +PKIRQ + ++ +R I E VDGG+ +
Sbjct: 122 LIECILPMADLVLLMTVNPGFGGQQFIPEVLPKIRQVRNMLDERGIKAEIQVDGGINAST 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ V+AGA +LV GS+ F G+I A + L+ +A+ +
Sbjct: 182 AAAAVEAGATVLVAGSAVFGS-GDIPSA--IAQLRTAAMRV 219
>gi|150866849|ref|XP_001386579.2| D-ribulose-5-phosphate 3- epimerase [Scheffersomyces stipitis CBS
6054]
gi|149388105|gb|ABN68550.2| D-ribulose-5-phosphate 3- epimerase [Scheffersomyces stipitis CBS
6054]
Length = 232
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 127/204 (62%), Gaps = 8/204 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY---SDS 63
I PSILA+DF+ LG I GA+ +H DVMDG FVPNIS GA +I SLR SD
Sbjct: 6 ISPSILASDFANLGSHCKCIVNGGAEWLHLDVMDGHFVPNISLGAPIIASLRKQFPRSDP 65
Query: 64 ---VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
FDCH+M+S+ + I IA AG D TFH E++ R+++ + A G K GV++ P+
Sbjct: 66 NPVFFDCHMMVSNPEQWIEDIAKAGGDGYTFHFEATDDALRTIKKVKAAGMKVGVSVKPK 125
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +L +++EID+ L+MTV PGFGGQ+ + + K+ + +++EVDGG+
Sbjct: 126 TPVEVLFPIVEEIDLALVMTVEPGFGGQKFMPEMMAKVEILRNKY--PDLNIEVDGGLAK 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
I + +AGA+++V G+S F +
Sbjct: 184 DTIDAAAKAGANVIVGGTSVFGAE 207
>gi|304317332|ref|YP_003852477.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778834|gb|ADL69393.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 221
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 4/203 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+I PSIL+A+F + ++I + K IH DVMDG FVPNI+FG D IR++R
Sbjct: 1 MNPTIN--PSILSANFCNIEKDIKILEKNSITSIHIDVMDGNFVPNIAFGIDQIRAIREI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ FD HLMI+ D I DAG D IT H E+ PH+ R++ I G G+A+NP
Sbjct: 59 TEMKFDIHLMINDPDKFIERFVDAGADNITVHAEACPHLYRTIELIKKYGVSVGIALNPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T + L + ID +LIMTV PGFGGQ IE K++ + K + S++VDGG+
Sbjct: 119 TSIESLRYLYKLIDKVLIMTVEPGFGGQNFIEEMKNKLKDLVTIKEKYNYNFSIQVDGGI 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFF 201
+ N++ +V+ G +V+GSS F
Sbjct: 179 SKDNVEEIVKLGVTDVVIGSSIF 201
>gi|303311561|ref|XP_003065792.1| ribulose-phosphate 3-epimerase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105454|gb|EER23647.1| ribulose-phosphate 3-epimerase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039672|gb|EFW21606.1| ribulose-phosphate 3-epimerase [Coccidioides posadasii str.
Silveira]
Length = 252
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 132/236 (55%), Gaps = 35/236 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E SN+ KA + IH D+MDG FVPNI+FGA V+ +R++
Sbjct: 1 MAPPAIIAPSILSADFANLGAECSNLMKADSDWIHVDIMDGHFVPNITFGAPVVSKIRAH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS--------PHIRRS-- 102
FDCH+MI+ + AGCD+ FH E++ P + +
Sbjct: 61 VQKPASIGGKGTFDCHMMIAEPQKWVKEFKQAGCDLYCFHWEAAMTSTAAKDPADKETTA 120
Query: 103 -------LRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFGGQQ 149
+R IH G + G+A+ P T V +L D+ I+ DM+LIMTVNPGFGGQ+
Sbjct: 121 RTSPKELIRYIHETGMQAGIALKPATSVDVLWDILENPVEIERPDMVLIMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK+ +AL K +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 FMASELPKV---EALRKKYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAK 233
>gi|313899940|ref|ZP_07833442.1| ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312955248|gb|EFR36914.1| ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 221
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ D+SR E++ + ++ AK +HFDVMDG FVPN++FG D+++ + D V D
Sbjct: 6 IAPSILSLDYSRTSEQLKELDESNAKWMHFDVMDGHFVPNLTFGPDLLKGFKKAVDMVMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINPETPV 123
H+M+ + D I A AG D+ITFH E+ + + R I MG + GV++ P+T V
Sbjct: 66 VHIMVDNPDMVAEIFAKAGADVITFHLEAVKDVDACIQLCRKIREMGVQAGVSVKPKTGV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L + E+D++LIM+V PGFGGQ +E T+ K+R + I K ++ +E+DGG+
Sbjct: 126 DALLTHLKEMDLVLIMSVEPGFGGQSFMEDTLEKVRILRERIEKEGLNTRIEIDGGINGE 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
K V AG D LV GS F
Sbjct: 186 TAKLAVAAGVDTLVAGSYVFKN 207
>gi|325108970|ref|YP_004270038.1| ribulose-phosphate 3-epimerase [Planctomyces brasiliensis DSM 5305]
gi|324969238|gb|ADY60016.1| ribulose-phosphate 3-epimerase [Planctomyces brasiliensis DSM 5305]
Length = 230
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 121/199 (60%), Gaps = 2/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQ-IHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I PS+L DF L E++ + KA IHFDVMD FVPN+S+GA +I S+RS +D
Sbjct: 14 WIAPSMLKCDFGDLAGELAALEKATQTPLIHFDVMDAHFVPNLSYGAMLIESVRSRTDLP 73
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ HLMIS +++ AGCDIITFH E+ P L+ I + G+ G+A+NP TPVA
Sbjct: 74 FEAHLMISEPARYLDDYIKAGCDIITFHIEAVPEPTELLQKIKSHGRMAGLALNPGTPVA 133
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E + + D++L+M+V PGFGGQQ + + KI+ + + + L VDGG+ I
Sbjct: 134 SIEPFLADCDLVLVMSVEPGFGGQQFMPVALEKIQAIREKLKPEQL-LSVDGGIGLDTIA 192
Query: 185 SLVQAGADLLVVGSSFFNQ 203
+GAD V GSS FN+
Sbjct: 193 PCANSGADTFVCGSSIFNE 211
>gi|269127207|ref|YP_003300577.1| ribulose-phosphate 3-epimerase [Thermomonospora curvata DSM 43183]
gi|268312165|gb|ACY98539.1| ribulose-phosphate 3-epimerase [Thermomonospora curvata DSM 43183]
Length = 221
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 130/201 (64%), Gaps = 3/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RL EE++ I+ A +H DVMD FVPN++ G V+ SL +S
Sbjct: 2 AAKIFPSILSADFARLAEEVALISD-DADWVHVDVMDNHFVPNLTLGLPVVESLVKHSAL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E++ R+LR I A G + G+ INP TP+
Sbjct: 61 PLDCHLMIEDPDRWAPAYAEVGAGSVTIHAEAAKAPIRTLRAIRAAGARAGLGINPATPL 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
E+++ EIDM+L+MTV PGFGGQ+ ++ +PK+R+A+ LI R ++ L+VDGGV++
Sbjct: 121 EPYEELLGEIDMLLLMTVEPGFGGQKFLDLVLPKVRRARQLIKSRDLAVWLQVDGGVSAE 180
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ +AGAD+ V G++ +
Sbjct: 181 TIERCAEAGADVFVAGNAVYG 201
>gi|119194077|ref|XP_001247642.1| hypothetical protein CIMG_01413 [Coccidioides immitis RS]
Length = 252
Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 136/248 (54%), Gaps = 37/248 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E SN+ KA + IH D+MDG FVPNI+FGA V+ ++R++
Sbjct: 1 MAPPAIIAPSILSADFANLGAECSNLMKADSDWIHVDIMDGHFVPNITFGAPVVSNIRAH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS--------PHIRRS-- 102
FDCH+MI+ + AGCD+ FH E++ P + +
Sbjct: 61 VQKPASIGGKGTFDCHMMIAEPQKWVKEFKQAGCDLYCFHWEAAMTSTAAKDPTDKETTA 120
Query: 103 -------LRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFGGQQ 149
+R IH G + G+A+ P T V +L D+ I+ DM+LIMTVNPGFGGQ+
Sbjct: 121 RTSPKELIRYIHETGMQAGIALKPATSVDVLWDILENPVEIERPDMVLIMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ S +PK+ A + K+ +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 FMASELPKV----AALRKKYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAKDPA 236
Query: 208 SYAKRLND 215
+L +
Sbjct: 237 EVIAKLRE 244
>gi|296120916|ref|YP_003628694.1| ribulose-phosphate 3-epimerase [Planctomyces limnophilus DSM 3776]
gi|296013256|gb|ADG66495.1| ribulose-phosphate 3-epimerase [Planctomyces limnophilus DSM 3776]
Length = 234
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 131/215 (60%), Gaps = 1/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L DF+ L E+S + +A A +H+DVMDG FVPN+S+GA +I S+R + FD
Sbjct: 19 IAPSMLKVDFADLATEVSRLEEAHAHLLHWDVMDGNFVPNLSYGAMLIASVRKRTSLFFD 78
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ + +++ AGCD IT H E++P L+ I A G G+AINP TP++ L
Sbjct: 79 AHLMIAHPEKYVDEYLAAGCDAITVHIEAAPEPAEILQRIRAGGAHAGLAINPHTPLSHL 138
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E +D+ D++L+M+V PGFGGQ+ + + K+R ++ + + L +DGG+ + I +
Sbjct: 139 EPWLDQCDLVLVMSVQPGFGGQKFMPEVLDKVRALRSRLAPH-VRLSIDGGIGTTTIAAA 197
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
AGA L V GS+ F+ ++L L S+L
Sbjct: 198 SAAGARLFVAGSAIFDVSDYAIAMRQLEQLASSSL 232
>gi|149192535|ref|ZP_01870710.1| Pentose-5-phosphate-3-epimerase [Vibrio shilonii AK1]
gi|148833631|gb|EDL50693.1| Pentose-5-phosphate-3-epimerase [Vibrio shilonii AK1]
Length = 225
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 139/217 (64%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS++ DFS+L +E++ + KA +H DVMDG FVPN + G + I+++R+ +D +
Sbjct: 3 KFCPSMMCVDFSKLPQELAELEKAKVDMLHIDVMDGHFVPNFALGPEDIKAIRNTTDIEY 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S+ D +I++ AD G ++ H E+ PH+ R+L I A G K+G+AINP TP+++
Sbjct: 63 DVHLMLSNPDQYIDMFADLGASLMYVHAEAPPHLHRTLGNIQAKGIKSGLAINPGTPLSV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+EDV+D D+IL+M+VNPGF GQ+ I + +I + +I K+ L +DG ++ I
Sbjct: 123 IEDVLDVTDVILVMSVNPGFAGQKFIANAFNRIDRIIDMINKQGTDTKLAIDGAISPEVI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L++ + ++G++ K SYA+ +++L+ A
Sbjct: 183 -DLLKDKIEYFILGTAGLFGK-PTSYAETMDNLRAIA 217
>gi|167765261|ref|ZP_02437374.1| hypothetical protein BACSTE_03649 [Bacteroides stercoris ATCC
43183]
gi|167696889|gb|EDS13468.1| hypothetical protein BACSTE_03649 [Bacteroides stercoris ATCC
43183]
Length = 216
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+A+F+ L +I I + A +H D+MDG FVPNISFG V++ + ++ D
Sbjct: 5 ISPSILSANFAYLANDIEMINGSEADWVHVDIMDGVFVPNISFGFPVLKYVAKLAEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + I + + G I+ H E+ PH+ R ++ I G V INP TPV++L
Sbjct: 65 VHLMIVQPEKFIPEVKELGARIMNVHYEACPHLHRVVQQIREAGMLPAVTINPATPVSML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
D+I+++ M+LIM VNPGFGGQ+ I T+ K+R+ + LI G ++ +EVDGGV
Sbjct: 125 RDIINDVYMVLIMGVNPGFGGQKFIAHTVDKVRELRELITVTGSEAL-IEVDGGVNLDTG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD LV G++ F+ + L +L
Sbjct: 184 SRLVDAGADALVAGNAVFSAPDPTEAIRALKNL 216
>gi|32471487|ref|NP_864480.1| ribulose-phosphate 3-epimerase [Rhodopirellula baltica SH 1]
gi|32443328|emb|CAD72161.1| Ribulose-phosphate 3-epimerase [Rhodopirellula baltica SH 1]
Length = 235
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 124/213 (58%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PS+L DF L EI +T AG + +H DVMDG FVPN+++G ++ LR ++D D
Sbjct: 16 ILPSLLQCDFGDLRTEIEKLTVAGTRVLHLDVMDGHFVPNLTYGMPIVEGLRRHTDMPLD 75
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS ++ + DAG D++TFH E+ I MG GVAINP+T A L
Sbjct: 76 VHLMISDPIAYAQPMVDAGADLLTFHVEAVDDCVEVAGKIRDMGVGVGVAINPDTDFAKL 135
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ +D +DM+L+M+VN GFGGQQ + ++R K K + LE+DGG+ + I
Sbjct: 136 DCCLDSVDMVLVMSVNAGFGGQQFNPVALDRLRSLKER--KPDLLLEIDGGIKAETIGDA 193
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AG DL VVGS+ F Q Y +N+L ++
Sbjct: 194 RAAGCDLFVVGSAIFGQH---DYETAINELTQA 223
>gi|288800105|ref|ZP_06405564.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333353|gb|EFC71832.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 299 str.
F0039]
Length = 221
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 139/217 (64%), Gaps = 5/217 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF L ++I I K+ A +H D+MDG FVPNISFG VI ++ D
Sbjct: 5 ISPSLLSADFINLQKDIDMINKSEADWLHLDIMDGTFVPNISFGFPVISAVAKACKKTLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G +I+ H E+ H+ R+++ IH+ G K GVA+NP TPV++L
Sbjct: 65 AHFMIEHPEHYIAQTAKLGVEIMCVHYEACVHLHRTIQEIHSTGMKAGVALNPSTPVSVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED++D++D++LIM+VNPGFGGQ+ I + + K+ Q + I KR++S +EVDGGV N K
Sbjct: 125 EDILDDLDLVLIMSVNPGFGGQKFIPNALKKVAQLRQEIDKRNLSTIIEVDGGVQGDNAK 184
Query: 185 SLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKK 218
+L+ AGA+ LV GS FN + I KR+ K+
Sbjct: 185 ALIDAGANALVSGSYIFNSSNPEDTIKELKRITTFKR 221
>gi|227534883|ref|ZP_03964932.1| ribulose-phosphate 3-epimerase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187639|gb|EEI67706.1| ribulose-phosphate 3-epimerase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 221
Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 132/217 (60%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L ++ + KAGA +H DVMDG FV N++FG V+++LR +
Sbjct: 6 MKIAPSILSADFAHLARDVEKVEKAGADLLHVDVMDGHFVSNLTFGPLVVQALRPVTSLP 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+S + + A+AG D I H E++ H+ L+ + G + GV INP TP++
Sbjct: 66 LEVHLMVSDPAAWVADFAEAGADTILVHEEATDHLYGVLQHVIEKGVRAGVVINPGTPLS 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
LE+V+ +D +L+MTVNPGFGGQ+ + + K+ + L R + +EVDGG+ ++
Sbjct: 126 SLEEVLPLVDQVLVMTVNPGFGGQKFLTPMVDKVDRLYQLRKARKLHFDIEVDGGINNQT 185
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K+ AG D+ V GS F K + +N L+++
Sbjct: 186 VKAAADAGTDIFVAGSYVFGSK---NVGDAMNSLREA 219
>gi|116495102|ref|YP_806836.1| Pentose-5-phosphate-3-epimerase [Lactobacillus casei ATCC 334]
gi|191638607|ref|YP_001987773.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BL23]
gi|239631981|ref|ZP_04675012.1| pentose-5-phosphate-3-epimerase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066666|ref|YP_003788689.1| pentose-5-phosphate-3-epimerase [Lactobacillus casei str. Zhang]
gi|116105252|gb|ABJ70394.1| ribulose-5-phosphate 3-epimerase [Lactobacillus casei ATCC 334]
gi|190712909|emb|CAQ66915.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BL23]
gi|239526446|gb|EEQ65447.1| pentose-5-phosphate-3-epimerase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439073|gb|ADK18839.1| Pentose-5-phosphate-3-epimerase [Lactobacillus casei str. Zhang]
gi|327382649|gb|AEA54125.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei LC2W]
gi|327385843|gb|AEA57317.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BD-II]
Length = 216
Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 132/217 (60%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L ++ + KAGA +H DVMDG FV N++FG V+++LR +
Sbjct: 1 MKIAPSILSADFAHLARDVEKVEKAGADLLHVDVMDGHFVSNLTFGPLVVQALRPVTSLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+S + + A+AG D I H E++ H+ L+ + G + GV INP TP++
Sbjct: 61 LEVHLMVSDPAAWVADFAEAGADTILVHEEATDHLYGVLQHVIEKGVRAGVVINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
LE+V+ +D +L+MTVNPGFGGQ+ + + K+ + L R + +EVDGG+ ++
Sbjct: 121 SLEEVLPLVDQVLVMTVNPGFGGQKFLTPMVDKVDRLYQLRKARKLHFDIEVDGGINNQT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K+ AG D+ V GS F K + +N L+++
Sbjct: 181 VKAAADAGTDIFVAGSYVFGSK---NVGDAMNSLREA 214
>gi|295396523|ref|ZP_06806683.1| ribulose-phosphate 3-epimerase [Brevibacterium mcbrellneri ATCC
49030]
gi|294970641|gb|EFG46556.1| ribulose-phosphate 3-epimerase [Brevibacterium mcbrellneri ATCC
49030]
Length = 217
Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 139/220 (63%), Gaps = 7/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L E+ I+ A H DVMD FVPN++FG V+ +++ S
Sbjct: 1 MKIHPSILSADFANLETELQRISNA--DMAHVDVMDNHFVPNLTFGPPVVERIKAVSPVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D + + A+ GC+ +TFH E++ R R + +G + VAI P TPV
Sbjct: 59 IDAHLMIADADRNAPVYAEMGCESVTFHLEAAAAPVRLARELRRLGAQASVAIKPGTPVE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L D++ E D +LIMTV PGFGGQ+ ++ +PK+++ +A I +++ ++++VDGG+++
Sbjct: 119 PLIDLLGEFDQVLIMTVEPGFGGQKFLDVCLPKVKRLRAAISEQNMKVNIQVDGGISAST 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ V+AGA++ V GS+ + G + A +++L+ ALA
Sbjct: 179 LDRAVEAGANVFVAGSAVY---GSDNPAATIDELRAQALA 215
>gi|156545295|ref|XP_001607477.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase [Nasonia
vitripennis]
Length = 224
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 128/215 (59%), Gaps = 6/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSD 62
+ +I PSIL AD S+L EE + +GA +H DVMDG FVPN++FG +++ LR+ D
Sbjct: 6 TAKIGPSILNADLSQLSEECRRLLDSGADYLHLDVMDGHFVPNLTFGHPLVKCLRAKVKD 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ F+ H+M+S I +ADAG D TFH E + R I G K GVA+ P TP
Sbjct: 66 AFFETHMMVSKPQQWIEPMADAGVDQYTFHVEPVEDVPLVCRKIREAGMKVGVALKPGTP 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V ++ + ++E DM+L+MTV PGFGGQ+ ++S + K+ + + +EVDGGV
Sbjct: 126 VEVVTEYVNEADMVLVMTVEPGFGGQKFMDSMMKKVSWLRQ--NYPDLDIEVDGGVGPST 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + +AGA+++V G++ N AK + DLK
Sbjct: 184 INACAEAGANMIVSGTAVINASDP---AKVIKDLK 215
>gi|239608416|gb|EEQ85403.1| ribulose-phosphate 3-epimerase [Ajellomyces dermatitidis ER-3]
gi|327349618|gb|EGE78475.1| ribulose-phosphate 3-epimerase [Ajellomyces dermatitidis ATCC
18188]
Length = 254
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 130/235 (55%), Gaps = 33/235 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF+ LG S++ G IH D+MDG FVPNI+FG V+ +R +
Sbjct: 1 MTPPAIIAPSILSADFAALGSACSDVMDWGGDWIHVDIMDGHFVPNITFGPPVVTKIRKH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
FDCH+MI+ + AGC++ FH P + R
Sbjct: 61 VAEPNKHCEKGTFDCHMMIAEPQKWVKEFKKAGCNLYCFHYEAAVASTAAKDPMDNSTTR 120
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQ 149
R+ +R IH G + G+AI PET V +L D++D+ DM+LIMTV PGFGGQ+
Sbjct: 121 RTSPTELIRYIHDCGMRAGIAIKPETDVDVLWDILDQKDELDTPDMVLIMTVRPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ES + K+R +A K I+++VDGG+ +K AGA+++V GS+ F+ +
Sbjct: 181 FMESQLEKVRALRARYPK--INIQVDGGLGEDTVKLAADAGANVIVAGSAVFHAQ 233
>gi|307609463|emb|CBW98957.1| ribulose-phosphate 3-epimerase [Legionella pneumophila 130b]
Length = 204
Score = 164 bits (415), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Query: 17 SRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVFDCHLMISSID 75
+RLGEE+ + KAGA IHFDVMD +VPN++FG +L + + + D HLM + +D
Sbjct: 2 TRLGEEVDAVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIKKFPNLPIDVHLMTTPVD 61
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP TP+ L +
Sbjct: 62 TLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATPIDTLTWCAHNLKF 121
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +NI SL AGA+ V
Sbjct: 122 VLVMTVNPGFGGQKLIPEVIPKLSKIRQ--QHPNLDLCVDGGVTPQNIASLAHAGANQFV 179
Query: 196 VGSSFFNQKGEISYAKRLND 215
GS+ FN KR+ +
Sbjct: 180 AGSAIFNSSNYSETIKRMRE 199
>gi|281358754|ref|ZP_06245230.1| ribulose-phosphate 3-epimerase [Victivallis vadensis ATCC BAA-548]
gi|281314781|gb|EFA98818.1| ribulose-phosphate 3-epimerase [Victivallis vadensis ATCC BAA-548]
Length = 234
Score = 164 bits (415), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PS+LAADF+ L EI + A IH DVMDGCFVPNISFG VI+S+R ++ +
Sbjct: 12 ILVSPSVLAADFTELAAEIDRAVQGKADLIHLDVMDGCFVPNISFGPPVIKSIRKRTELI 71
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+MI + A+AG D +TFH E + ++ I G G+++ P TP
Sbjct: 72 LDTHIMIEHPVRYAKAFAEAGSDHLTFHLECADPTAEAIEAIRQAGCTVGISLKPATPAE 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+ +D ID++L+MTV PGFGGQ+ + +PKI + I +R+ + LE DGG+
Sbjct: 132 AVFPWLDRIDLVLVMTVEPGFGGQKFMADQMPKIAAIRREIKRRNLHVQLEADGGIDETT 191
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ GA+++V G+S F G + RL
Sbjct: 192 VIPTASCGANMIVAGTSVFRHPGGAAEGIRL 222
>gi|221119546|ref|XP_002161732.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 236
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 124/197 (62%), Gaps = 3/197 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+P ++ PSIL D S+L E + ++GA +H DVMDG FVPNI+FGA V++ LR+
Sbjct: 7 SPRCKVGPSILNTDLSQLATECERLIESGADYLHLDVMDGHFVPNITFGAPVVKCLRTQI 66
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD H+M++ IN + DAG D TFH E++ +RTI G K G+A+ P+
Sbjct: 67 TKTFFDMHMMVADPKKWINDMQDAGADQYTFHIEATDQPANVIRTIRETGMKVGIAVKPK 126
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + ++ I ++DM+LIMTV PGFGGQ+ + + +PK+ + I +EVDGGV
Sbjct: 127 TDIEVILPYIKDVDMVLIMTVEPGFGGQKFMANMMPKVELVREAFP--FIDIEVDGGVGP 184
Query: 181 RNIKSLVQAGADLLVVG 197
NI+ + +AGA+++V G
Sbjct: 185 SNIEIVAKAGANMIVSG 201
>gi|206896452|ref|YP_002246732.1| ribulose-phosphate 3-epimerase [Coprothermobacter proteolyticus DSM
5265]
gi|206739069|gb|ACI18147.1| ribulose-phosphate 3-epimerase [Coprothermobacter proteolyticus DSM
5265]
Length = 220
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 130/206 (63%), Gaps = 5/206 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++VPS+L+AD L +++ + + +H DVMDG FVPNIS G ++ SLR +SD
Sbjct: 3 KLVPSLLSADLWCLKDQLDVLKQYQVDTLHVDVMDGNFVPNISMGVPLVESLRKHSDFSL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI++ + I +AG D++T H E++ HI R ++ I +G K GV++NP TP+ +
Sbjct: 63 DVHLMIANPERFIETFREAGADLLTVHIEATYHIHRLIQQIRNVGCKAGVSLNPGTPLEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRN 182
++ ++ +D++L+M+VNPGFGGQ + T+ K++ +R +EVDGG+ N
Sbjct: 123 IKPILHMVDLVLVMSVNPGFGGQDFLPETLSKVKMLHQWKQEREDYKYIVEVDGGINRSN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
++ ++ AGA+ +V GS F KG++
Sbjct: 183 VEQVLNAGAEWIVSGSGVF--KGDLK 206
>gi|156063452|ref|XP_001597648.1| hypothetical protein SS1G_01844 [Sclerotinia sclerotiorum 1980]
gi|154697178|gb|EDN96916.1| hypothetical protein SS1G_01844 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 252
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 133/236 (56%), Gaps = 36/236 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF++LG+E S+ GA +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFAKLGKECSDTIGQGADWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPES--------SPHI----- 99
D FDCH+MI+ + AGCD+ FH E+ SP
Sbjct: 61 VDRPTAKHGKGTFDCHMMIAEPKKWVKEFQKAGCDLYCFHYEAAISSTTAESPETTSDSK 120
Query: 100 ---RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI------DMILIMTVNPGFGGQQL 150
+ +R IH G G+AI P+T V +L D+++ DM+L+MTV+PGFGGQ+
Sbjct: 121 TNPKELIRYIHDNGMLAGIAIKPDTKVDVLWDILENTEEKERPDMVLVMTVHPGFGGQKF 180
Query: 151 IESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK+ + + KR +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 MASELPKVAELR----KRYPDLNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAK 232
>gi|257461277|ref|ZP_05626374.1| ribulose-phosphate 3-epimerase [Campylobacter gracilis RM3268]
gi|257441305|gb|EEV16451.1| ribulose-phosphate 3-epimerase [Campylobacter gracilis RM3268]
Length = 213
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 128/215 (59%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF RL EEI + +AGA IH DVMDG FVPN++ G V ++ S
Sbjct: 1 MYVAPSILSADFGRLAEEIRAVCEAGADLIHVDVMDGHFVPNLTIGPLVASAVAKASSKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ +++ ++FH E H R + I G V +NP TP++
Sbjct: 61 LDIHLMVKNVPFFVDLFLPLKPKFLSFHIEEEQHPLRLIDHIRRSGVSPAVVLNPHTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE ++ E+DM+L+M+VNPGFGGQ+ I S + KI+Q + LI ++ +EVDGGV N
Sbjct: 121 ALEFILGEVDMVLLMSVNPGFGGQKFIPSALEKIKQLRDLIDRKGAKCLIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + +AGAD++V G+ F+ YA+ + LK
Sbjct: 181 IADIDEAGADVVVAGNYIFSSN---DYAEAIRALK 212
>gi|167383143|ref|XP_001736421.1| ribulose-phosphate 3-epimerase [Entamoeba dispar SAW760]
gi|165901208|gb|EDR27326.1| ribulose-phosphate 3-epimerase, putative [Entamoeba dispar SAW760]
Length = 216
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 133/215 (61%), Gaps = 9/215 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PS+L+ DFS + +E + + +AGA ++H DVMDG FVPN++ GA +++ L + F
Sbjct: 5 ICPSLLSCDFSHMADEANAVLQAGADELHVDVMDGHFVPNLTLGAPIVKCLHNAIPKAFL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS---LRTIHAMGKKTGVAINPETP 122
DCHLMI + + +AG +ITFH E+ I + + +H+ G K GV+I P+T
Sbjct: 65 DCHLMIENPKRWVIDYVNAGASLITFHIEAVSSIEEAKEIIDMVHSKGVKVGVSIKPKTQ 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V ++ED+ID++D +LIMTV PGFGGQ ++ +PK+++ + + I +VDGG++ +
Sbjct: 125 VKVIEDIIDKVDRVLIMTVEPGFGGQSFMQDMMPKVKEVREKWPSKDI--QVDGGISDKT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGA V GS F +K Y+K ++ LK
Sbjct: 183 VRIAKDAGATSFVAGSYVFKEK---DYSKPIHLLK 214
>gi|160915442|ref|ZP_02077653.1| hypothetical protein EUBDOL_01450 [Eubacterium dolichum DSM 3991]
gi|158432562|gb|EDP10851.1| hypothetical protein EUBDOL_01450 [Eubacterium dolichum DSM 3991]
Length = 220
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 127/206 (61%), Gaps = 7/206 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ DF+R+ E++ + AK +HFDVMDG FVPN++FG D+++ + D V D
Sbjct: 6 IAPSILSLDFARVEEQLKELNSRHAKWLHFDVMDGHFVPNLTFGPDILKGFKKAVDMVMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIR---RSLRTIHAMGKKTGVAINPETPV 123
H+M+S ++ A AG DIITFH E+ I R R I ++G K GV++ P+T
Sbjct: 66 VHIMVSDPVFFADVFAKAGADIITFHLEAVEDIDACIRLCRHIRSLGVKVGVSVKPKTSP 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+L + E+DM+L+M+V PGFGGQ +E+ + K+R + I + + +++DGG+
Sbjct: 126 EVLLPYLQEMDMVLVMSVEPGFGGQSFMEAMLDKVRLLRKEIDAKGYATRIQIDGGINEE 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEI 207
K V+AG D+LV GS F KG+I
Sbjct: 186 TGKLAVEAGCDVLVAGSYVF--KGDI 209
>gi|46446402|ref|YP_007767.1| ribulose-phosphate 3-epimerase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46400043|emb|CAF23492.1| putative ribulose-phosphate 3-epimerase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 243
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 135/237 (56%), Gaps = 23/237 (9%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILA DF L +E +AGA +H D+MDG FVPN++ G+ + ++ ++
Sbjct: 7 AVKIAPSILAGDFGHLADEAKKAEQAGADSLHLDIMDGHFVPNLTMGSQAVSAINRATNL 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I AG D ITFH E++ + +L I + G+A NPET V
Sbjct: 67 FLDVHLMIYNPFDYIERFVQAGADSITFHMEATEDVEETLAYIRKCNIRAGLAFNPETSV 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI------------- 170
+++ +D+ DMIL+MTVNPGFGGQ+ IE + K++ + L + +I
Sbjct: 127 SMIPKYLDKCDMILLMTVNPGFGGQKFIEKVLDKVQFTRDLCNQLNIRAGGVTLKDNSST 186
Query: 171 -------SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++VDGG+T N++ V+AGA+++V G+S F ++A + +++SA
Sbjct: 187 GHQLPPFDIQVDGGITHLNVRRCVEAGANVIVAGTSLFKSP---NFADAIKQMRQSA 240
>gi|404536|gb|AAB27778.1| pentose-5-phosphate 3-epimerase [Rhodospirillum rubrum]
Length = 219
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 124/192 (64%), Gaps = 4/192 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I+I PS+L+ADF+ + + GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MTRAIRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM +D I+ A+AG D+ITFHPE+S H+ RS++ I G K GVA+NP
Sbjct: 61 TSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
+P+++L+ +++++D++LIM+VNPGFGGQ I S +PKI A G+R VDGGV
Sbjct: 121 SPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKI--AALANGRRRACRGDRVDGGV 178
Query: 179 TSRNIKSLVQAG 190
+ ++L + G
Sbjct: 179 NPADARALARPG 190
>gi|297626326|ref|YP_003688089.1| Ribulose-phosphate 3-epimerase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|76556227|emb|CAD48939.1| ribulose-phosphate 3-epimerase [Propionibacterium freudenreichii
subsp. shermanii]
gi|296922091|emb|CBL56659.1| Ribulose-phosphate 3-epimerase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 222
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PS+L AD + L E++ I A A +H DVMD FVPN++ G V+ SL+ ++
Sbjct: 2 SMRITPSVLNADLADLAGEVARIPSADA--VHIDVMDNHFVPNLTLGLPVVSSLQRHTKL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI DS A+AGC+ +TFH E++ R R I +G +A+ P TP+
Sbjct: 60 PFDIHLMIEDADSWAPQYAEAGCESVTFHAEATSAPVRLAREIRRLGSAASLALRPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
D+I E D +LIMTV PGFGGQ+ ++ +PKIR+ +A+ + L +VDGGV+
Sbjct: 120 EPFADLIAEFDQVLIMTVEPGFGGQKFLDIMLPKIRRTRAIAAASGVELAIQVDGGVSVD 179
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I +AGAD+ V G++ F
Sbjct: 180 TIGRCAEAGADVFVAGTAVFR 200
>gi|283457830|ref|YP_003362428.1| pentose-5-phosphate-3-epimerase [Rothia mucilaginosa DY-18]
gi|283133843|dbj|BAI64608.1| pentose-5-phosphate-3-epimerase [Rothia mucilaginosa DY-18]
Length = 233
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+ L E+ I+ A A H DVMD FVPN+++G V++ LR S
Sbjct: 3 IAINPSILSADFANLQRELERISTADAA--HIDVMDNHFVPNLTWGPPVVKRLREISPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D A GC+ +TFH E++ + RT+ A G K G+A+ P T V
Sbjct: 61 FDVHLMIEDADRWAPEYASMGCESVTFHAEAAIAPIKLARTLRAEGAKAGMALRPATAVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-RQAKALIGKR-SISLEVDGGVTSRN 182
D++ E+DM+LIMTV PGFGGQ ++ T+PKI R AKA+ G ++++VDGG+T
Sbjct: 121 PYLDMLSELDMLLIMTVEPGFGGQAFLDVTLPKIARAAKAIEGANLPVTVQVDGGITEET 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I +AGA V GSS +
Sbjct: 181 ILRAAEAGATCFVAGSSVYG 200
>gi|255325952|ref|ZP_05367042.1| ribulose-phosphate 3-epimerase [Rothia mucilaginosa ATCC 25296]
gi|255296967|gb|EET76294.1| ribulose-phosphate 3-epimerase [Rothia mucilaginosa ATCC 25296]
Length = 231
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 121/200 (60%), Gaps = 4/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+ L E+ I+ A A H DVMD FVPN+++G V++ LR S
Sbjct: 3 IAINPSILSADFANLQRELERISTADAA--HIDVMDNHFVPNLTWGPPVVKRLREISPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D A GC+ +TFH E++ + RT+ A G K G+A+ P T V
Sbjct: 61 FDVHLMIEDADRWAPEYASMGCESVTFHAEAAIAPIKLARTLRAEGAKAGMALRPATAVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-RQAKALIGKR-SISLEVDGGVTSRN 182
D++ E+DM+LIMTV PGFGGQ ++ T+PKI R AKA+ G ++++VDGG+T
Sbjct: 121 PYLDMLGELDMLLIMTVEPGFGGQAFLDVTLPKIARAAKAIEGANLPVTVQVDGGITEET 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I +AGA V GSS +
Sbjct: 181 ILRAAEAGATCFVAGSSVYG 200
>gi|50842679|ref|YP_055906.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes KPA171202]
gi|50840281|gb|AAT82948.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes KPA171202]
gi|315105889|gb|EFT77865.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL030PA1]
Length = 223
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 122/199 (61%), Gaps = 4/199 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPSADG--LHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDWWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I+ +AGAD V GS+ +
Sbjct: 181 IERAAEAGADTFVAGSAVY 199
>gi|312195560|ref|YP_004015621.1| ribulose-phosphate 3-epimerase [Frankia sp. EuI1c]
gi|311226896|gb|ADP79751.1| ribulose-phosphate 3-epimerase [Frankia sp. EuI1c]
Length = 238
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 127/218 (58%), Gaps = 5/218 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PS+LAADF R+ + + + A +H DVMD FVPN++F D + +LR+ +++
Sbjct: 5 QIYPSLLAADFGRIADAARAV-EGRADWLHVDVMDYHFVPNLAFSGDTVTALRAATETPL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMIS D A+ G +T H E+ ++ R+ I A G +TG+A+ P TPV
Sbjct: 64 DCHLMISDPDRWAPGFAERGAANVTIHAEAVENLPRTTEAIRAAGARTGLAVKPATPVEG 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
D + D++L+MT+ PGFGGQ ++S +PKI+ A+ L+ +R + L++DGGV + I
Sbjct: 124 YADDLHRFDLLLLMTIEPGFGGQTFMDSVLPKIQAARRLLDQRGLDLWLQIDGGVNAETI 183
Query: 184 KSLVQAGADLLVVGSSFFN--QKGEISYAKRLNDLKKS 219
+ AG D+ V G++ + G A R L+ S
Sbjct: 184 ERAAAAGVDVFVAGTAVYGLADPGAAVEALRAQALRAS 221
>gi|315080461|gb|EFT52437.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL078PA1]
Length = 223
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 122/199 (61%), Gaps = 4/199 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPSADG--LHIDVMDGRFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I+ +AGAD V GS+ +
Sbjct: 181 IERAAEAGADTFVAGSAVY 199
>gi|170084769|ref|XP_001873608.1| ribulose-5-phosphate 3-epimerase [Laccaria bicolor S238N-H82]
gi|164651160|gb|EDR15400.1| ribulose-5-phosphate 3-epimerase [Laccaria bicolor S238N-H82]
Length = 227
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 131/222 (59%), Gaps = 4/222 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PS+LA+DF +L E + K GA+ +H DVMDG FVPNI+ GA ++ +
Sbjct: 2 PRAIISPSVLASDFGQLTAECKRMIKGGAEWLHMDVMDGHFVPNITMGAPILSCVHKGVP 61
Query: 63 SVF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+F DCH+M++ + ++ IADAG + FH E++ + TIH K GVAI+P+T
Sbjct: 62 GIFMDCHMMVAKPEQWVDDIADAGGSLYCFHIEATSDPVSLINTIHKRNMKAGVAISPDT 121
Query: 122 P-VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
P AI +++ + DM+L+MTV PG GGQ+ IE +PK+ + +A ++ I EVDGGV
Sbjct: 122 PSTAITDEIANAADMLLVMTVYPGRGGQKFIERCVPKVAELRARFPEKDI--EVDGGVGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I AG +++V G++ F + + +RL D +A A
Sbjct: 180 NTIGICADAGCNVIVAGTAIFGSENPMEVIQRLKDTVNAAQA 221
>gi|325478710|gb|EGC81821.1| ribulose-phosphate 3-epimerase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 221
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 135/222 (60%), Gaps = 7/222 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ DFS+L E + K IH DVMDG FVPNISFG VI+ +R +D
Sbjct: 2 VELSPSILSCDFSKLQENLDQTKNTQLKMIHIDVMDGVFVPNISFGFKVIKDIRDKNDYF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I +AG D IT H ES + + I ++G + G+++ P+T ++
Sbjct: 62 FDTHLMIVDPIRYIERFKEAGADRITIHYESCENPLDVINKIKSLGIEAGISLRPKTELS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ E+D +L+M+V PGFGGQ IES++ ++R+ + I K +++ +E+DGG+ + N
Sbjct: 122 KILPLLKEVDAVLVMSVEPGFGGQSFIESSLDRVRELRDYIDKNNLACKIEIDGGIKTTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSAL 221
+ +++AG D +V GS F + KG+I K KK+ L
Sbjct: 182 VDKVIKAGCDEIVSGSDIFGKEDIKGQIE--KYYEIFKKNPL 221
>gi|289425490|ref|ZP_06427267.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes SK187]
gi|289428512|ref|ZP_06430196.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes J165]
gi|295130758|ref|YP_003581421.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes SK137]
gi|289154468|gb|EFD03156.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes SK187]
gi|289158206|gb|EFD06425.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes J165]
gi|291375287|gb|ADD99141.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes SK137]
gi|313764278|gb|EFS35642.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL013PA1]
gi|313772004|gb|EFS37970.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL074PA1]
gi|313791964|gb|EFS40065.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL110PA1]
gi|313801553|gb|EFS42793.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL110PA2]
gi|313807697|gb|EFS46184.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL087PA2]
gi|313810204|gb|EFS47925.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL083PA1]
gi|313812768|gb|EFS50482.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL025PA1]
gi|313816369|gb|EFS54083.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL059PA1]
gi|313818734|gb|EFS56448.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL046PA2]
gi|313820504|gb|EFS58218.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL036PA1]
gi|313822690|gb|EFS60404.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL036PA2]
gi|313825376|gb|EFS63090.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL063PA1]
gi|313827341|gb|EFS65055.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL063PA2]
gi|313830535|gb|EFS68249.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL007PA1]
gi|313833571|gb|EFS71285.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL056PA1]
gi|313838907|gb|EFS76621.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL086PA1]
gi|314915755|gb|EFS79586.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL005PA4]
gi|314918183|gb|EFS82014.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL050PA1]
gi|314920259|gb|EFS84090.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL050PA3]
gi|314924984|gb|EFS88815.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL036PA3]
gi|314931479|gb|EFS95310.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL067PA1]
gi|314955488|gb|EFS99891.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL027PA1]
gi|314957864|gb|EFT01967.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL002PA1]
gi|314960350|gb|EFT04452.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL002PA2]
gi|314962620|gb|EFT06720.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL082PA1]
gi|314967515|gb|EFT11614.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL037PA1]
gi|314973535|gb|EFT17631.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL053PA1]
gi|314975757|gb|EFT19852.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL045PA1]
gi|314978684|gb|EFT22778.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL072PA2]
gi|314983763|gb|EFT27855.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL005PA1]
gi|314989754|gb|EFT33845.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL005PA3]
gi|315077836|gb|EFT49887.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL053PA2]
gi|315084790|gb|EFT56766.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL027PA2]
gi|315085475|gb|EFT57451.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL002PA3]
gi|315088468|gb|EFT60444.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL072PA1]
gi|315095809|gb|EFT67785.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL038PA1]
gi|315098711|gb|EFT70687.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL059PA2]
gi|315101520|gb|EFT73496.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL046PA1]
gi|315108808|gb|EFT80784.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL030PA2]
gi|327326362|gb|EGE68152.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL096PA2]
gi|327330433|gb|EGE72182.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL097PA1]
gi|327331763|gb|EGE73500.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL096PA3]
gi|327443540|gb|EGE90194.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL013PA2]
gi|327445744|gb|EGE92398.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL043PA2]
gi|327448273|gb|EGE94927.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL043PA1]
gi|327450605|gb|EGE97259.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL087PA3]
gi|327453317|gb|EGE99971.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL092PA1]
gi|327454056|gb|EGF00711.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL083PA2]
gi|328753138|gb|EGF66754.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL025PA2]
gi|328754023|gb|EGF67639.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL087PA1]
gi|328754751|gb|EGF68367.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL020PA1]
gi|328760949|gb|EGF74514.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL099PA1]
gi|332675602|gb|AEE72418.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes 266]
Length = 223
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 122/199 (61%), Gaps = 4/199 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPSADG--LHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I+ +AGAD V GS+ +
Sbjct: 181 IERAAEAGADTFVAGSAVY 199
>gi|169623815|ref|XP_001805314.1| hypothetical protein SNOG_15151 [Phaeosphaeria nodorum SN15]
gi|111056256|gb|EAT77376.1| hypothetical protein SNOG_15151 [Phaeosphaeria nodorum SN15]
Length = 252
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 134/250 (53%), Gaps = 34/250 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG+ S+ GA +H D+MDG FVPN++FGA V+ +R +
Sbjct: 1 MSPPAIIAPSILSADFGALGKACSDTIGQGADWLHVDIMDGHFVPNMTFGAPVVTKIRPH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPES--------SPHIRRSLR 104
D FDCH+MI+ + AGCD+ FH E+ SP + +
Sbjct: 61 VDRPANAHGKGTFDCHMMIAEPKKWVRDFKKAGCDLYCFHYEAAISSTAAESPEGKSDKK 120
Query: 105 T--------IHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQL 150
T IHA G + G+AI P TPV +L D++D DM+L+MTV PGFGGQ
Sbjct: 121 TSPKELIKYIHAEGMQAGIAIKPSTPVDVLWDILDNPAKDEVPDMVLVMTVEPGFGGQSF 180
Query: 151 IESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ AL K + +EVDGG++ + I AGA+++V GS+ F
Sbjct: 181 MASELPKV---SALRKKYPEMHIEVDGGLSEKTIDQAADAGANVIVAGSAVFGASDPGEV 237
Query: 210 AKRLNDLKKS 219
K+L + +S
Sbjct: 238 IKKLREAVES 247
>gi|45657427|ref|YP_001513.1| ribulose-5-phosphate 3-epimerase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600666|gb|AAS70150.1| ribulose-5-phosphate 3-epimerase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 215
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 126/214 (58%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA + L + + N IH DVMDG FVP ISFG + + ++S +
Sbjct: 1 MKISASILATKLTELVKTVPNYDPTAIDLIHMDVMDGNFVPQISFGEALTKEVKSLTSIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM++ ++H+ + ITFH E++ R + I + G K GV++NP TPV+
Sbjct: 61 LDVHLMVAKPENHVFKYYEFNPYCITFHIETTDFPIRLAQEIKSHGTKVGVSLNPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE+V+ +D+IL+MTV PGF GQ+ I + + KIR+ K LIG R I LEVDGGV NI+
Sbjct: 121 SLENVLPYVDLILLMTVEPGFYGQKFIINGMDKIRKVKELIGSRPIELEVDGGVNDTNIQ 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + G D++VVG+ + + AK L L +
Sbjct: 181 ELRKNGVDIVVVGAGLYKTGNPVENAKNLKYLAR 214
>gi|269837713|ref|YP_003319941.1| ribulose-phosphate 3-epimerase [Sphaerobacter thermophilus DSM
20745]
gi|269786976|gb|ACZ39119.1| ribulose-phosphate 3-epimerase [Sphaerobacter thermophilus DSM
20745]
Length = 229
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PS+L AD RL + ++ I AGA +H DVMDG FVPNI+ G V+ ++ +
Sbjct: 11 VAIAPSVLTADLVRLADAVAAIEAAGADYVHLDVMDGRFVPNITIGIPVVEAVADVTHLP 70
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +++ AG I+T H E+S H+ R+++ I G + GVA+NP TP+A
Sbjct: 71 VDVHLMIVEPERYVDQFIAAGAQIVTVHVEASVHLHRTVQRIREAGAQAGVALNPATPLA 130
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E+++ +D++L+M+VNPGFGGQ I +++ KI + + +I +R ++VDGG+ + N
Sbjct: 131 AIEEILPFVDLVLVMSVNPGFGGQTFIPTSLGKIERLRRMIDERGARAVIQVDGGIKASN 190
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I+ +V AGAD++V GS+ F + ++ A L
Sbjct: 191 IRRVVDAGADIIVAGSAVFTPERSVAEAMAL 221
>gi|119962223|ref|YP_947576.1| ribulose-phosphate 3-epimerase [Arthrobacter aurescens TC1]
gi|119949082|gb|ABM07993.1| ribulose-phosphate 3-epimerase [Arthrobacter aurescens TC1]
Length = 224
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L E+ I+ A A +H DVMD FVPN++ G V++ +++ S D
Sbjct: 6 INPSILSADFVNLEAELQRISNADA--VHVDVMDNHFVPNLTLGLPVVQRIQAVSPVPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D ADAG +TFH E++ + R + A G K G+A+ P TPV
Sbjct: 64 AHLMISDADRWAPAYADAGVASVTFHAEAAMAPVKLARELRARGSKAGMALRPATPVEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
D++ E+DM+LIMTV PGFGGQ ++ T+PKIR+A+A I I +++VDGG+T I
Sbjct: 124 LDMLSELDMLLIMTVEPGFGGQSFLDITLPKIRRARAAIEGSGIGVAIQVDGGITEETIV 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+AGA++ V GS+ + RL
Sbjct: 184 RAAEAGANVFVAGSAVYGHADPAEAIDRL 212
>gi|315186725|gb|EFU20483.1| ribulose-phosphate 3-epimerase [Spirochaeta thermophila DSM 6578]
Length = 215
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 128/206 (62%), Gaps = 6/206 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSV 64
++ SIL A+F+RLG+EI + ++H DVMDG +V NISFG VI +LR +S V
Sbjct: 3 KLSASILNANFARLGDEIREVEDL-IDELHLDVMDGHYVDNISFGLPVIGTLRKEFSSLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS + + +AG DI+ FH E++P L+ I G+ G+++NP T V
Sbjct: 62 FDTHLMISHPERYWEEFIEAGSDILVFHLEATPKAFLILQRIKEKGRLAGISLNPATDVR 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+LE V D +D +LIMTV PGFGGQ+ + + KI QA+ ++G R + +EVDGG+ I
Sbjct: 122 LLEPVKDLLDRVLIMTVEPGFGGQRFLTPMLRKIEQAREILGDR-VDIEVDGGINPTTIV 180
Query: 185 SLVQAGADLLVVGSSFF---NQKGEI 207
AGA VVGSS F +++GEI
Sbjct: 181 EARSAGATTFVVGSSIFQSEDKRGEI 206
>gi|314966586|gb|EFT10685.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL082PA2]
Length = 223
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 122/199 (61%), Gaps = 4/199 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPSADG--LHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWAPQYVEAGAQSVTFHLEAATAPIKLARELQSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I+ +AGAD V GS+ +
Sbjct: 181 IERAAEAGADTFVAGSAVY 199
>gi|313112962|ref|ZP_07798606.1| ribulose-phosphate 3-epimerase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310624727|gb|EFQ08038.1| ribulose-phosphate 3-epimerase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 216
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 121/199 (60%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
+ PSIL+ADF +LG + + AGA+ +H+DVMDG FVPNISFG V++SL ++ D+ +
Sbjct: 4 VSPSILSADFGKLGADCRMVLDAGAQMLHYDVMDGHFVPNISFGVPVLKSLHKNLPDAFY 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMIS + AG + FH E I+ ++ + A+G K G+ I P T
Sbjct: 64 DVHLMISHPLQYAEAFIKAGATLYNFHLECEDDIQATIDAVRALGCKVGLTIKPGTEPQA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L +D++D++L+M+V PGFGGQ+ + S + K+R KA R LEVDGGV +
Sbjct: 124 LAPYLDQLDLVLVMSVEPGFGGQKFMPSALDKLRWLKAEREARGAHYLLEVDGGVDNATA 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
V+AGAD+LV GS+ F
Sbjct: 184 PQCVEAGADILVAGSAVFG 202
>gi|88856226|ref|ZP_01130886.1| ribulose-phosphate 3-epimerase [marine actinobacterium PHSC20C1]
gi|88814545|gb|EAR24407.1| ribulose-phosphate 3-epimerase [marine actinobacterium PHSC20C1]
Length = 220
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 127/219 (57%), Gaps = 7/219 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSILAADF L +IS I+ A +H D+MD FVPN++FG + ++ S
Sbjct: 2 SVRISPSILAADFVNLERDISRISNA--DLVHVDIMDNHFVPNLTFGLQMTERIQQVSTI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D AD G +TFH E++ RT+ + G + G+A+ P T +
Sbjct: 60 PLDIHLMIDNPDRWAPDYADLGAFAVTFHAEAASDAVALARTLRSQGARAGIAVKPGTAI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++++E D +L+MTV PGFGGQ +E T+PK+RQ + L+ KR + LEVDGGV R
Sbjct: 120 EPYLELLEEFDQVLVMTVEPGFGGQSFMEETMPKLRQLRELVDKRGLDVWLEVDGGVDER 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ AGAD V GSS F + R+ +L++ A
Sbjct: 180 TIEIAAAAGADTFVAGSSVFRSDDP---SLRVTELRERA 215
>gi|313837730|gb|EFS75444.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL037PA2]
gi|314927388|gb|EFS91219.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL044PA1]
gi|314972669|gb|EFT16766.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL037PA3]
gi|328907471|gb|EGG27237.1| ribulose-phosphate 3-epimerase [Propionibacterium sp. P08]
Length = 223
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR SD
Sbjct: 2 TVRITPSILNANLANLAGEVGRIPSADG--LHIDVMDGHFVPNLVMGAPFVESLRPASDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI D +AG +TFH E++ + R + +MG + VA+ P TP+
Sbjct: 60 MFDVHLMIEDPDRWAPQYVEAGAQSVTFHLEATTAPIKLARELRSMGARASVALRPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI I L++DGGV++
Sbjct: 120 EQLADILTEFDQILLMTVEPGFGGQEFLDPVLSKIRKARKLIDAAGADIWLQIDGGVSAE 179
Query: 182 NIKSLVQAGADLLVVGSSFF 201
I+ +AGAD V GS+ +
Sbjct: 180 TIERAAEAGADTFVAGSAVY 199
>gi|327398445|ref|YP_004339314.1| ribulose-phosphate 3-epimerase [Hippea maritima DSM 10411]
gi|327181074|gb|AEA33255.1| ribulose-phosphate 3-epimerase [Hippea maritima DSM 10411]
Length = 219
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 124/214 (57%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ DF+ L +EI + AG +H D+MDG FVPN++FG ++ ++ S D
Sbjct: 7 IAPSLLSCDFTHLADEIMAVENAGCDMLHLDIMDGHFVPNMTFGPFIVSQIKRVSKVPLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D + +AG D + H ES H+ R + I +G K VA+NP TP +L
Sbjct: 67 VHLMIEAPDMWLERYVEAGADYLCVHQESVVHLNRVVNRITELGAKPAVALNPATPPQVL 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E V++ +DM+L+M+VNPGFGGQ+ I + I K+ + ++ +EVDGG+ NI
Sbjct: 127 EYVLEFVDMVLVMSVNPGFGGQKYISNIIKKVEWLARFREENGLNFLIEVDGGINRTNIG 186
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + G D+ V GS+ F+ Y K + + ++
Sbjct: 187 MLSKKGVDVFVAGSAIFSSD---DYKKTIEEFRE 217
>gi|282853847|ref|ZP_06263184.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes J139]
gi|282583300|gb|EFB88680.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes J139]
gi|314923540|gb|EFS87371.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL001PA1]
gi|314981511|gb|EFT25605.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL110PA3]
gi|315092175|gb|EFT64151.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL110PA4]
gi|315092892|gb|EFT64868.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL060PA1]
gi|327327409|gb|EGE69185.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL103PA1]
Length = 223
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 122/199 (61%), Gaps = 4/199 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPSADG--LHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWAPQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I+ +AGAD V GS+ +
Sbjct: 181 IERAAEAGADTFVAGSAVY 199
>gi|315103586|gb|EFT75562.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL050PA2]
Length = 223
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 122/199 (61%), Gaps = 4/199 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPSADG--LHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWAPQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I+ +AGAD V GS+ +
Sbjct: 181 IERAAEAGADTFVAGSAVY 199
>gi|270290367|ref|ZP_06196592.1| ribulose-phosphate 3-epimerase [Pediococcus acidilactici 7_4]
gi|304384755|ref|ZP_07367101.1| ribulose-phosphate 3-epimerase [Pediococcus acidilactici DSM 20284]
gi|270281148|gb|EFA26981.1| ribulose-phosphate 3-epimerase [Pediococcus acidilactici 7_4]
gi|304328949|gb|EFL96169.1| ribulose-phosphate 3-epimerase [Pediococcus acidilactici DSM 20284]
Length = 215
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 135/216 (62%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD + L +++ + GA +H DVMDG FVPN+SFG + ++ L D
Sbjct: 2 IKVAPSILSADPANLMKDVEQVQ--GADYLHVDVMDGSFVPNLSFGLNTVKGLAQDCDIK 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++++ A AG II H ES+ HI R+++ I G + V +NP TP+
Sbjct: 60 LDVHLMIQNPENYVEQFAQAGASIIGVHVESTQHIARAIQLIKQAGAQAEVVVNPGTPLT 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE+++ E+D +LIM+VNPGFGGQ+ +ES+I K+++ AL R + +E+DGG++ +N
Sbjct: 120 ELEELLPEVDQVLIMSVNPGFGGQKFLESSISKVKRLSALRQARGLEFDIEIDGGISDQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K + AG D+ V GS FN + L DL K
Sbjct: 180 VKQVYDAGVDVAVAGSYIFNAPDYTKQVQTLKDLTK 215
>gi|121716430|ref|XP_001275806.1| ribulose-phosphate 3-epimerase [Aspergillus clavatus NRRL 1]
gi|119403963|gb|EAW14380.1| ribulose-phosphate 3-epimerase [Aspergillus clavatus NRRL 1]
Length = 250
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 128/235 (54%), Gaps = 33/235 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E S GA +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MAPPAIIAPSILSADFAVLGNECSTKIAQGADWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
+ FDCH+MI + AGCD+ FH PE R
Sbjct: 61 VERPTQPHGKGTFDCHMMIMEPHKWVKEFKSAGCDLYCFHYEAAVSSVAATTPEDKETTR 120
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
R+ +R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 RTSPKELIRYIHEEGMQAGIAIKPDTPVDVLWDILENKDEKERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK++ + +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVKALRERY--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAQ 233
>gi|212544274|ref|XP_002152291.1| ribulose-phosphate 3-epimerase [Penicillium marneffei ATCC 18224]
gi|210065260|gb|EEA19354.1| ribulose-phosphate 3-epimerase [Penicillium marneffei ATCC 18224]
Length = 251
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 135/248 (54%), Gaps = 37/248 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF++LG E + + GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFAQLGPECATTMERGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE------------------ 94
FDCH+MI+ ++ AGCD+ FH E
Sbjct: 61 VAKPATPGERGTFDCHMMIAEPQKWVSEFKSAGCDLYCFHYEAAISSTAAKDPADYTTTT 120
Query: 95 -SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFGG 147
+SP + +R IH G K G+AI P+T V +L D+ I+ DM+L+MTV+PGFGG
Sbjct: 121 KTSP--KELIRYIHESGMKAGIAIKPDTKVDVLWDILENETEIERPDMVLVMTVHPGFGG 178
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
Q+ + S +PK+ + ++++EVDGG+ I AGA+++V GS+ F K
Sbjct: 179 QKFMASELPKVTALRQRY--PNLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAKDPA 236
Query: 208 SYAKRLND 215
++L D
Sbjct: 237 EVIQKLRD 244
>gi|255076303|ref|XP_002501826.1| ribulose-phosphate 3-epimerase [Micromonas sp. RCC299]
gi|226517090|gb|ACO63084.1| ribulose-phosphate 3-epimerase [Micromonas sp. RCC299]
Length = 222
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ + PS+LA+DF+R+ +E + GA +H D+MDG FVPN++FGA V++ L +
Sbjct: 1 MAPAAIVSPSLLASDFARMADEAKKVIDGGADWLHLDIMDGHFVPNLTFGAPVVKCLAKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ DCHLM+++ ++ + DAG + TFH E A G K GVA+ P
Sbjct: 61 TDAFLDCHLMVTNPGDYVEPLKDAGAHMFTFHIEVDEDAAVLCDRARAAGMKAGVALKPG 120
Query: 121 TPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
TP + + D ++DM+L+MTV PGFGGQ+ +PK++ + + I ++VDGG+
Sbjct: 121 TPAEAVHAICDAGKVDMVLVMTVEPGFGGQKFQPEMMPKVKALRERYPQ--IDIQVDGGL 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
I++ AGA+++V GSS F
Sbjct: 179 GPATIEAAATAGANVIVAGSSVFG 202
>gi|296273688|ref|YP_003656319.1| ribulose-phosphate 3-epimerase [Arcobacter nitrofigilis DSM 7299]
gi|296097862|gb|ADG93812.1| ribulose-phosphate 3-epimerase [Arcobacter nitrofigilis DSM 7299]
Length = 213
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF +L EEI+ I G IH DVMDG FVPN++ G V+ + + D
Sbjct: 3 VAPSILSADFGKLNEEITAICDGGCDLIHVDVMDGHFVPNMTLGPVVVNPVAKIATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A + I+FH ES H R ++ I G K + +NP + +
Sbjct: 63 VHLMVENNTFFVDLFAPLKPEYISFHIESEKHPHRLIQKIRDYGIKPAIVLNPHSTPESI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E +++++DM+L+M+VNPGFGGQ+ I S + K ++ K LI KR+ + +EVDGGV +NI
Sbjct: 123 EYLLEDLDMVLLMSVNPGFGGQKFITSVVEKAKKLKELINKRNPNCLIEVDGGVNDKNIH 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AG D++V GS F+Q Y+K + L+
Sbjct: 183 ELKDAGVDVVVAGSYVFSQD---DYSKAIKSLQ 212
>gi|314987944|gb|EFT32035.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL005PA2]
Length = 223
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 122/199 (61%), Gaps = 4/199 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPSADG--LHIDVMDGHFVPNLVRGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I+ +AGAD V GS+ +
Sbjct: 181 IERAAEAGADTFVAGSAVY 199
>gi|315638421|ref|ZP_07893598.1| ribulose-phosphate 3-epimerase [Campylobacter upsaliensis JV21]
gi|315481412|gb|EFU72039.1| ribulose-phosphate 3-epimerase [Campylobacter upsaliensis JV21]
Length = 215
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EEI +++AGA +H DVMDG FVPN++FG V+ + S S
Sbjct: 1 MYVAPSLLSANFLKLEEEIKAVSEAGADLLHIDVMDGHFVPNLTFGPCVLEKISSISSVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + ++FH E+ H + + G + +NP TP++
Sbjct: 61 LDVHLMVKDVPKFVELFLPLKPKFLSFHIEAEAHPIKLCEYLRTQGIHPAITLNPHTPIS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
LE +I+ +DM+L+M+VNPGFGGQ+ + KIR+ +ALI K+ + +EVDGGV N
Sbjct: 121 SLEHLIEFVDMVLLMSVNPGFGGQKFLSLVYDKIRELRALIEKKQAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
L +AGAD+LV G+ F+
Sbjct: 181 AADLEEAGADILVAGNYIFS 200
>gi|257440063|ref|ZP_05615818.1| ribulose-phosphate 3-epimerase [Faecalibacterium prausnitzii
A2-165]
gi|257197415|gb|EEU95699.1| ribulose-phosphate 3-epimerase [Faecalibacterium prausnitzii
A2-165]
Length = 216
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL+ADF++LG + + AGA+ +H+DVMDG FVPNISFG V++SL + + +
Sbjct: 4 ISPSILSADFNQLGADCRMVLDAGAQMLHYDVMDGHFVPNISFGVPVLKSLHKGMPAAFY 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMIS + AG + FH E I++++ + A+G K G+ I P T
Sbjct: 64 DVHLMISHPLQYAEPFIKAGASLYNFHLECEDDIQQTIDAVKALGCKVGLTIKPGTAPEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L +D++D++L+M+V PGFGGQ+ + S + K+R K KRS LEVDGGV
Sbjct: 124 LAPYLDQLDLVLVMSVEPGFGGQKFMPSALEKLRWLKEERAKRSARYLLEVDGGVDDTTA 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
V+AGAD+LV GS+ F
Sbjct: 184 PLCVEAGADILVAGSAVFG 202
>gi|227504401|ref|ZP_03934450.1| ribulose-phosphate 3-epimerase [Corynebacterium striatum ATCC 6940]
gi|227199049|gb|EEI79097.1| ribulose-phosphate 3-epimerase [Corynebacterium striatum ATCC 6940]
Length = 221
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 126/219 (57%), Gaps = 7/219 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ I PSILAADFSRLGEE+ + A IH D+MDG FVPN+SFG D+ +++ +D
Sbjct: 2 PAPIISPSILAADFSRLGEEVRAVHNA--DWIHVDIMDGHFVPNLSFGPDITKTVDGITD 59
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR---TIHAMGKKTGVAINP 119
V D HLMI + + A+AG D I FH E+ +L I MG + G +I P
Sbjct: 60 QVLDVHLMIEEPEKWVETYAEAGADCIIFHVEAVADEHAALALADQIRGMGVRAGFSIKP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ D ++ D+ L+M+V PGFGGQ+ + + K+R +A I ++ + +E+DGG
Sbjct: 120 NTPIEPWLDKLEHFDLALVMSVEPGFGGQKFMPEMLDKVRTLRAAIDEQGLDTLIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++ I + +AG V GS+ + Q + + + L L
Sbjct: 180 ISAETIAASAEAGCHAFVAGSAIYKQADKAAAVEELRQL 218
>gi|116328324|ref|YP_798044.1| Pentose-5-phosphate-3-epimerase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331050|ref|YP_800768.1| Pentose-5-phosphate-3-epimerase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121068|gb|ABJ79111.1| Pentose-5-phosphate-3-epimerase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124739|gb|ABJ76010.1| Pentose-5-phosphate-3-epimerase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 215
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 127/215 (59%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA + LGE + + + +H DVMDG FVP ISFG + + +++ +
Sbjct: 1 MKISASILATKLTELGETVPHYDPSAIDLMHMDVMDGNFVPQISFGEALSKEVKALTTIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+S ++H+ + ITFH E++ R + I + G K GV++NP T V+
Sbjct: 61 LDVHLMVSKPENHVPKYYELNPYCITFHIETTDFPVRLAQEIKSYGTKVGVSLNPGTSVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE+V+ +D++L+MTV PGF GQ+ I + + KIR+AK LI R I LEVDGGV NI+
Sbjct: 121 TLENVLPYVDLVLLMTVEPGFYGQKFIVNGMEKIRKAKELIHTRPIELEVDGGVNDTNIQ 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L + G D++VVG+ + + A+ L L K
Sbjct: 181 ELKKNGVDIVVVGAGLYKTGKPMDNARNLKSLAKQ 215
>gi|212695661|ref|ZP_03303789.1| hypothetical protein ANHYDRO_00178 [Anaerococcus hydrogenalis DSM
7454]
gi|212677334|gb|EEB36941.1| hypothetical protein ANHYDRO_00178 [Anaerococcus hydrogenalis DSM
7454]
Length = 220
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 130/202 (64%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+A+F+ L ++ + K K +H D+MDG FVPNISFG +I+++R +D +
Sbjct: 2 VEISPSVLSANFANLQNDLDQLKKTKVKYLHLDIMDGKFVPNISFGFPIIKAIREDNDFI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I+ +G D+IT H E+ ++ ++ I G K G++ P+T +
Sbjct: 62 FDTHLMIDEPIRYIDQFKKSGADLITVHYEACSNLDETIEKIKDSGLKVGLSFKPKTDIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +++ID+ L+M+V PGFGGQ I+++I KI++ ++ I ++S +EVDGG+ N
Sbjct: 122 KIIPYLEKIDLCLVMSVEPGFGGQSFIKNSIGKIQKLRSYIDDNNLSCLIEVDGGIKDHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+K ++ AG D++V GS F+ K
Sbjct: 182 LKKVIDAGVDVVVSGSDIFSHK 203
>gi|284991538|ref|YP_003410092.1| ribulose-phosphate 3-epimerase [Geodermatophilus obscurus DSM
43160]
gi|284064783|gb|ADB75721.1| ribulose-phosphate 3-epimerase [Geodermatophilus obscurus DSM
43160]
Length = 224
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 126/205 (61%), Gaps = 5/205 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+L+ADF+RL EE + A A +HFDVMD FVPN++FG V++++++
Sbjct: 1 MSRSPLIAPSLLSADFARLAEESQRV--ADADWLHFDVMDAHFVPNLTFGLPVMQAVQAV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINP 119
S DCHLMI A+AG +T H E+ R++ R + A G G+A+ P
Sbjct: 59 SPVPLDCHLMIEDPARWAPGYAEAGARNVTVHAEACTDDPRAVARDLRAAGSLAGLALKP 118
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ DV+ E D +L+MTV PGFGGQ+ + T+PK+R+A+ L+ G ++ +EVDGG
Sbjct: 119 GTPLEEYLDVLPEFDTLLVMTVEPGFGGQRFLAETLPKVRRARELVDTGHLTLLVEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
+ + I+ AGAD+ V GS+ +
Sbjct: 179 INADTIEQAAAAGADVFVAGSAVYG 203
>gi|67478059|ref|XP_654455.1| ribulose-phosphate 3-epimerase [Entamoeba histolytica HM-1:IMSS]
gi|56471502|gb|EAL49066.1| ribulose-phosphate 3-epimerase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 216
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 133/215 (61%), Gaps = 9/215 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PS+L+ DFS + +E + + +AGA ++H DVMDG FVPN++ GA +++ L + F
Sbjct: 5 ICPSLLSCDFSHMADEANAVLQAGADELHVDVMDGHFVPNLTLGAPIVKCLHNAIPKAFL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHI---RRSLRTIHAMGKKTGVAINPETP 122
DCHLMI + + +AG ++TFH E+ I + + +H+ G K G++I P+T
Sbjct: 65 DCHLMIENPKRWVMDYVNAGASLVTFHIEAVSSIDEAKEIIDMVHSKGVKVGISIKPKTQ 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V ++ED+ID++D +LIMTV PGFGGQ ++ +PK+++ + + I +VDGG++ +
Sbjct: 125 VKVIEDIIDKVDRVLIMTVEPGFGGQSFMQDMMPKVKEVREKWPLKDI--QVDGGISDKT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGA V GS F +K Y+K ++ LK
Sbjct: 183 VRIAKDAGATSFVAGSYVFKEK---DYSKPIHLLK 214
>gi|309776702|ref|ZP_07671676.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308915450|gb|EFP61216.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 215
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 129/214 (60%), Gaps = 4/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ AD++RL +E+ + AGA H DVMDGCFVPNI+ G ++++R+++ ++ D
Sbjct: 3 LCPSMMCADYARLKQEVQELEAAGADIFHCDVMDGCFVPNITMGLMDVKTVRAHTKAMVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI ++ AG D+I HPE+ P + ++L I A GK G+AINP+T V+ +
Sbjct: 63 VHLMIEHPADKVDWFLQAGADLIYIHPEAEPQVMKTLMYIRAQGKLAGLAINPDTSVSTI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ D ILIM+V PGF GQ I+S KIR+ + + + +DG ++ I+
Sbjct: 123 KELLPHCDYILIMSVFPGFAGQSFIQSIDAKIRELISRKQEYGYRIVLDGACSAEVIQRY 182
Query: 187 VQAGADLLVVGSSFFNQKGEISYA---KRLNDLK 217
G D V+G+S Q GE SYA KRL L+
Sbjct: 183 HALGVDGFVLGTSALFQ-GEGSYADNIKRLRSLQ 215
>gi|28812245|dbj|BAC65120.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans]
Length = 196
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 120/197 (60%), Gaps = 9/197 (4%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
IHFDVMD +VPN++ G V ++R + D HLM+ +D + A AG ++I+FHP
Sbjct: 1 IHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDFAKAGANLISFHP 60
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
E S HI R+L I G K G+ NP TP+ L+ V+D +D +L+M+VNPGFGGQ I
Sbjct: 61 EGSDHIDRTLTLIRDHGCKAGLVFNPATPLNYLDHVMDRLDYVLLMSVNPGFGGQSFIPE 120
Query: 154 TIPKIRQAKALIGK------RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
T+ K+R+A+A I R I LEVDGGV + NI + AGAD V GS+ F G+
Sbjct: 121 TLNKLREARARIDAYTERTGREILLEVDGGVKADNIAEIAAAGADTFVAGSAIF---GKP 177
Query: 208 SYAKRLNDLKKSALAID 224
Y K +++++ + A++
Sbjct: 178 DYRKVIDEMRAALAAVE 194
>gi|325963043|ref|YP_004240949.1| ribulose-5-phosphate 3-epimerase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469130|gb|ADX72815.1| ribulose-5-phosphate 3-epimerase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 226
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L E+ I+ A A +H DVMD FVPN++ G V++ +++ S D
Sbjct: 6 INPSILSADFVNLEAELQRISSADA--VHVDVMDNHFVPNLTLGLPVVQRIQAVSPVPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ADAG +TFH E+S + R + + G K G+A+ P TPV
Sbjct: 64 AHLMIADADRWAPGFADAGLASVTFHAEASIAPVKLARELRSRGAKAGMALRPATPVEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
D++ E+DM+LIMTV PGFGGQ ++ T+PKIR+A+A I ++L+VDGG+T I
Sbjct: 124 VDMLSELDMLLIMTVEPGFGGQAFLDITLPKIRRARAAIDGSGMDVALQVDGGITEETIV 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA++ V GS+ + + RL +
Sbjct: 184 RAAEAGANVFVAGSAVYGADDPAAAIGRLRE 214
>gi|261749376|ref|YP_003257061.1| putative ribulose-phosphate 3-epimerase [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
gi|261497468|gb|ACX83918.1| putative ribulose-phosphate 3-epimerase [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 220
Score = 162 bits (409), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 124/203 (61%), Gaps = 4/203 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS--V 64
I PS+L+AD + L +I + ++ A H D+MD FV NISFG+ ++S++ Y++
Sbjct: 5 IAPSLLSADLAFLYRDIKMLNESEADWYHIDIMDSSFVSNISFGSSFVKSVKKYANKNKS 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I G D + H E+ H+ R++ +I G K G+A+NP TPV
Sbjct: 65 MDVHLMIMQPERYIEQFKVCGADHLHIHYEACIHLNRTIFSIKKSGMKVGIAVNPHTPVY 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+D+I +ID +L+M+VNPGF GQ+ I+ T K+ K LI K+ S +EVDGGV N
Sbjct: 125 LLQDIIQDIDFVLLMSVNPGFSGQKFIKKTYQKLEDTKDLILKKHSSALIEVDGGVNLEN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKG 205
L + GAD+LV G++ F+ +
Sbjct: 185 ASLLFKNGADILVAGTTIFSNEN 207
>gi|169629893|ref|YP_001703542.1| ribulose-phosphate 3-epimerase [Mycobacterium abscessus ATCC 19977]
gi|169241860|emb|CAM62888.1| Ribulose-phosphate 3-epimerase [Mycobacterium abscessus]
Length = 227
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL EE++ + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 8 IAPSILSADFARLAEEMAAVE--GADWLHVDVMDGHFVPNLTLGLPVVDSLLAATDIPID 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G++I P TP+
Sbjct: 66 CHLMIDNPDRWAPGYAEAGAHNVTFHAEATDNPVGVARDIRAAGAKAGLSIKPGTPLEPY 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+V+ + D +L+M+V PGFGGQ I S + K+R + L+ G+ S+ +E+DGG+ + I+
Sbjct: 126 LEVLKDFDTLLVMSVEPGFGGQSFIASVLDKVRAVRKLVDSGELSVLVEIDGGINTDTIE 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AG D V GS+ + + + + L +
Sbjct: 186 QAAEAGVDCFVAGSAVYGAQNPEAAVRALRE 216
>gi|145242032|ref|XP_001393662.1| ribulose-phosphate 3-epimerase [Aspergillus niger CBS 513.88]
gi|134078206|emb|CAK40285.1| unnamed protein product [Aspergillus niger]
Length = 252
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 132/236 (55%), Gaps = 35/236 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG E S G+ +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFGTLGSECSTKIAQGSDWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--------SSPHIRRS-- 102
FDCH+MI + DAGCD+ FH E +SP +
Sbjct: 61 VARPTEPNGKGTFDCHMMIQEPHKWVKDFKDAGCDLYCFHYEAAISSTAATSPADNTTTT 120
Query: 103 -------LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 KTSPKDLIRYIHEEGMQAGIAIKPDTPVDVLWDILANENEKERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK+ KAL K ++++EVDGG+ I +AGA+++V GS+ F +
Sbjct: 181 FMASELPKV---KALREKYPNLNIEVDGGLGLGTIDQAAEAGANVIVAGSAVFGAQ 233
>gi|15644465|ref|NP_229517.1| ribulose-phosphate 3-epimerase [Thermotoga maritima MSB8]
gi|4982295|gb|AAD36784.1|AE001811_4 ribulose-phosphate 3-epimerase [Thermotoga maritima MSB8]
Length = 220
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 126/209 (60%), Gaps = 3/209 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA D +RL +E+ + + IHFDVMDG FVPNISFG V+++LR +
Sbjct: 2 VKIAASILACDLARLADEVKRVEEH-VDMIHFDVMDGHFVPNISFGLPVLKALRKETKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI++ + +I+ + G D++ H ES+ H+ R + + +G + VAINP TP+
Sbjct: 61 ISVHLMITNPEDYIDRFIEEGADMVAIHYESTFHLHRLVHRVKDLGARAFVAINPHTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+L ++I ++D +L+M+VNPGF GQ+ I ++ KIR + ++ + + E VDGGV N
Sbjct: 121 LLSEIITDVDGVLVMSVNPGFSGQRFIARSLEKIRNLRKMVKELGLETEIMVDGGVNEEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAK 211
LV+ GA +LV+G F + K
Sbjct: 181 ASILVKNGATILVMGYGIFRNDNYVELIK 209
>gi|118474962|ref|YP_892036.1| ribulose-phosphate 3-epimerase [Campylobacter fetus subsp. fetus
82-40]
gi|118414188|gb|ABK82608.1| ribulose-phosphate 3-epimerase [Campylobacter fetus subsp. fetus
82-40]
Length = 213
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 127/215 (59%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L +E+ I +AGA +H DVMDG FVPN++ G V+ ++ S
Sbjct: 1 MYVAPSILSADFGKLDDEVKAICEAGADLVHIDVMDGHFVPNLTVGPLVVNAVAKSSSKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ +++ ++FH E H R + I G + +NP TPV+
Sbjct: 61 LDIHLMVENVPFFVDLFLPLKPKFLSFHIEEEKHPLRLIEYIRKNGVSPAIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE +I+E+DM+L+M+VNPGFGGQ+ I S + KI++ + LI K +EVDGGV N
Sbjct: 121 SLEYIINEVDMVLLMSVNPGFGGQKFIPSVLKKIKELRDLIEKNGAKCMIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L +AG D++V G+ F+ Y + + LK
Sbjct: 181 VSELDEAGVDIVVAGNFVFSSN---DYEQAIKALK 212
>gi|332670475|ref|YP_004453483.1| ribulose-phosphate 3-epimerase [Cellulomonas fimi ATCC 484]
gi|332339513|gb|AEE46096.1| ribulose-phosphate 3-epimerase [Cellulomonas fimi ATCC 484]
Length = 219
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 123/217 (56%), Gaps = 7/217 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+ADF+ L +++ I A A H DVMD FVPN++ G V+R L S
Sbjct: 2 SALINPSILSADFANLERDLARI--ATADWAHVDVMDNHFVPNLTIGLPVVRRLAQVSPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A+AG +TFH E++ R R + + G + GVA+ P TPV
Sbjct: 60 PLDVHLMIDDADRWAPAFAEAGAGSVTFHAEAAQAPVRLARELRSAGVRVGVALRPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D++ EIDM+L+MTV PGFGGQ IE T+PK+R+ +A I + ++VDGGV
Sbjct: 120 EPFVDLLAEIDMVLVMTVEPGFGGQSFIEGTLPKVRRTRAAIDAAGLDTWVQVDGGVARD 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLND 215
I + AGA++ V GS+ + GEI + L D
Sbjct: 180 TIGRIAAAGANVFVAGSAVYGADDVAGEIEALRALAD 216
>gi|313205205|ref|YP_004043862.1| ribulose-phosphate 3-epimerase [Paludibacter propionicigenes WB4]
gi|312444521|gb|ADQ80877.1| ribulose-phosphate 3-epimerase [Paludibacter propionicigenes WB4]
Length = 216
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 125/197 (63%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF L I + A+ +H D+MDG FVPNISFG V+ +++ +S D
Sbjct: 5 ISPSILAADFGNLQAACEMINGSEAQWLHIDIMDGSFVPNISFGFPVLEAVKKHSTKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + +I+ A AG DI+TFH E+ + + I A G K G+ INP+ PV++L
Sbjct: 65 VHLMIVNPEKYISRFAKAGADILTFHYETVENPLSVIELIRAEGIKVGITINPDVPVSVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E +D++D++L+MTV G+GGQ+ ++++ +I + K +I ++ +EVDGGV N
Sbjct: 125 EPFVDKVDLVLLMTVFAGYGGQKFMDNSYDRIAELKEIIERKKAHCLIEVDGGVNEDNAS 184
Query: 185 SLVQAGADLLVVGSSFF 201
L ++G ++LV GS+ F
Sbjct: 185 ILFESGVNVLVAGSAVF 201
>gi|227833014|ref|YP_002834721.1| ribulose-phosphate 3-epimerase [Corynebacterium aurimucosum ATCC
700975]
gi|262182498|ref|ZP_06041919.1| ribulose-phosphate 3-epimerase [Corynebacterium aurimucosum ATCC
700975]
gi|227454030|gb|ACP32783.1| ribulose-phosphate 3-epimerase [Corynebacterium aurimucosum ATCC
700975]
Length = 225
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+P I PSILAADF+RLGEE+ + A A IH D+MDG FVPN+SFG D+ ++ +
Sbjct: 5 SPGPIISPSILAADFTRLGEEVEAV--ANADWIHVDIMDGHFVPNLSFGPDITATVDGIT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAIN 118
D HLMI + + A AG D I FH E+ ++ R I +G + G +I
Sbjct: 63 SQTLDVHLMIEDPEKWVETYAKAGADCIIFHVEAVADKDAAIALARKIRDLGVRAGFSIK 122
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP+ D ++ D +L+M+V PGFGGQ + + K+R +A I +R ++ +E+DG
Sbjct: 123 PGTPIEPWLDALEHFDEVLVMSVEPGFGGQSFMPDQLDKVRTLRAAIDERGLNVLIEIDG 182
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
G+++ I+S +AG D V GS+ + Q + + + L L
Sbjct: 183 GISAETIRSAAEAGCDAFVAGSAIYKQADKAAAVEELRRL 222
>gi|189230344|ref|NP_001121496.1| ribulose-5-phosphate-3-epimerase [Xenopus (Silurana) tropicalis]
gi|183986205|gb|AAI66306.1| LOC100158597 protein [Xenopus (Silurana) tropicalis]
Length = 228
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL +D SRLG E + ++GA +H DVMDG FVPNI+FG V+ LR
Sbjct: 1 MSSGCKIGPSILNSDLSRLGAECDRMLQSGADYLHLDVMDGHFVPNITFGHPVVECLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
SD FD H+M++ + + ++ AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGSDPFFDMHMMVAQPEQWVKPMSAAGANQYTFHLEATNNPGALIKDIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK++ ++ S+ +EVDGGV
Sbjct: 121 PNTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVQWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
NI +AGA+++V GS+ + S K L
Sbjct: 179 GPDNIHRCAEAGANMIVSGSAIMKSEDPRSVIKLL 213
>gi|291231419|ref|XP_002735659.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 226
Score = 161 bits (408), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 123/199 (61%), Gaps = 2/199 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D S L E + AGA +H DVMDG FVPNI+FG V+ LR
Sbjct: 1 MATGCKIGPSILNSDLSLLASESQRMMDAGADYLHLDVMDGHFVPNITFGHPVVACLRKK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD H+M+S+ +S + +AD+G + TFH E++ + +R I G K G+ + P+
Sbjct: 61 TSAFFDMHMMVSNPESWVEPMADSGANQYTFHVEATDDPKSCIRKIREAGMKVGIGVKPK 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T V ++ I+++DM+LIMTV PGFGGQ + +PK++ + R++ +EVDGGV
Sbjct: 121 TDVEVVLPYIEDVDMVLIMTVEPGFGGQSFMSDMMPKVQFLRQKF--RALDIEVDGGVGL 178
Query: 181 RNIKSLVQAGADLLVVGSS 199
I+ +AGA+++V G++
Sbjct: 179 NTIEQCAEAGANMIVSGTA 197
>gi|256825116|ref|YP_003149076.1| ribulose-5-phosphate 3-epimerase [Kytococcus sedentarius DSM 20547]
gi|256688509|gb|ACV06311.1| ribulose-5-phosphate 3-epimerase [Kytococcus sedentarius DSM 20547]
Length = 223
Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 132/222 (59%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S+ + PSILA+DF+RLGEE++ I A A H DVMD FVPN++ G V+ +L+
Sbjct: 1 MSRSVSLHPSILASDFTRLGEELTRIATADAA--HVDVMDNHFVPNLTIGMPVVEALQEV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI+ +D A+ G +TFH E+S R+ R I + G + +A+ P
Sbjct: 59 TPIPLDLHLMIAEVDRWGPRYAETGAHSVTFHVEASDDPRQLARDIRSTGARAAMALKPG 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
T A D++ E+DM+L+MTV PGFGGQ + + +R+ + +G++ ++++VDGGV
Sbjct: 119 TAFADYADLLPELDMVLVMTVEPGFGGQSFMPGQLAVVREVRQAVGEQGLDVAIQVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I +AGAD+ V GS+ F G A + DL++ A
Sbjct: 179 NAETIVDSARAGADVFVAGSAVF---GAQDLAAAITDLRERA 217
>gi|312215711|emb|CBX95663.1| similar to ribulose-phosphate 3-epimerase [Leptosphaeria maculans]
Length = 252
Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 34/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG+ S+ GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFGALGKACSDTMAQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPES--------SP------- 97
D FDCH+MI+ + AGCD+ FH E+ SP
Sbjct: 61 VDRPLTAHGRGTFDCHMMIAEPKKWVRDFKKAGCDLYCFHYEAAISSTAAESPSGKSDRK 120
Query: 98 -HIRRSLRTIHAMGKKTGVAINPETPVAILEDVI-----DEI-DMILIMTVNPGFGGQQL 150
+ +R IH G + G+AI P TPV +L D++ +E+ DM+L+MTV PGFGGQ
Sbjct: 121 TSPKELIRYIHNEGMQAGIAIKPSTPVDVLWDILANPVKEEVPDMVLVMTVEPGFGGQSF 180
Query: 151 IESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ AL K + +EVDGG++ + I AGA+++V GS+ F
Sbjct: 181 MASELPKV---TALRQKYPELHIEVDGGLSEKTIDQAANAGANVIVAGSAVFGASDPGEV 237
Query: 210 AKRLND 215
++L D
Sbjct: 238 IQKLRD 243
>gi|162456472|ref|YP_001618839.1| ribulose-phosphate 3-epimerase [Sorangium cellulosum 'So ce 56']
gi|161167054|emb|CAN98359.1| Ribulose-phosphate 3-epimerase [Sorangium cellulosum 'So ce 56']
Length = 237
Score = 161 bits (408), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 133/228 (58%), Gaps = 12/228 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+ADF RL EE+ AGA IH DVMDG FVPNI+ G V+R++R+ +
Sbjct: 6 IIVAPSILSADFGRLAEEVRAAEAAGADWIHVDVMDGRFVPNITIGPLVVRAVRAATRLP 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ A AG D I+ H E+SPH+ R+L+ I G GV +NP TP
Sbjct: 66 LDVHLMIVEPERYVAEFAAAGADRISVHVEASPHLHRTLQQIRDAGASPGVVLNPHTPEE 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+ V+ +ID++L+M+VNPGFGGQ+ I + K+R + I + I+LEVDGGV
Sbjct: 126 SIRHVMADIDLVLVMSVNPGFGGQRFIPEALTKLRTLRQTIDQAGLDIALEVDGGVAPST 185
Query: 183 IKSLVQAGADLLVVGSSFFN--QKGE--------ISYAKRLNDLKKSA 220
++ AGA LV GS+ F +GE YA+ + L+ A
Sbjct: 186 AGQVIAAGARALVAGSAVFGAVARGEDLPFDVRVARYAEAIGALRAPA 233
>gi|261203103|ref|XP_002628765.1| ribulose-phosphate 3-epimerase [Ajellomyces dermatitidis SLH14081]
gi|239586550|gb|EEQ69193.1| ribulose-phosphate 3-epimerase [Ajellomyces dermatitidis SLH14081]
Length = 252
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 131/235 (55%), Gaps = 35/235 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF+ LG S++ G IH D+MDG FVPNI+FG V+ +R +
Sbjct: 1 MTPPAIIAPSILSADFAALGSACSDVMDWGGDWIHVDIMDGHFVPNITFGPPVVTKIRKH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
FDCH+MI+ + + AGC++ FH P + R
Sbjct: 61 VAEPNKHCEKGTFDCHMMIA--EKWVKEFKKAGCNLYCFHYEAAVASTAAKDPMDNSTTR 118
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQ 149
R+ +R IH G + G+AI PET V +L D++D+ DM+LIMTV PGFGGQ+
Sbjct: 119 RTSPTELIRYIHDCGMRAGIAIKPETDVDVLWDILDQKDELDTPDMVLIMTVRPGFGGQK 178
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ES + K+R +A K I+++VDGG+ +K AGA+++V GS+ F+ +
Sbjct: 179 FMESQLEKVRALRARYPK--INIQVDGGLGEDTVKLAADAGANVIVAGSAVFHAQ 231
>gi|311742369|ref|ZP_07716178.1| ribulose-phosphate 3-epimerase [Aeromicrobium marinum DSM 15272]
gi|311313997|gb|EFQ83905.1| ribulose-phosphate 3-epimerase [Aeromicrobium marinum DSM 15272]
Length = 221
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS+L ADF+ L +E + I GA +H DVMD FVPN++ GA VI SL
Sbjct: 2 AVRITPSVLNADFAHLADECARIP--GADWLHLDVMDNHFVPNLTLGAPVIESLAKVVAQ 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PIDAHLMIADPDRWAPGFVEAGARSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
D++ E+DM+LIMTV PGFGGQ ++ +PKIR+A+ L+ + + L+VDGGV+
Sbjct: 120 EPYADLLPELDMVLIMTVEPGFGGQSFLDLCLPKIRRARELLDRVGGDVWLQVDGGVSLG 179
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ AGAD V GS+ F
Sbjct: 180 TIERCADAGADTFVAGSAVFG 200
>gi|78777802|ref|YP_394117.1| ribulose-phosphate 3-epimerase [Sulfurimonas denitrificans DSM
1251]
gi|78498342|gb|ABB44882.1| ribulose-5-phosphate 3-epimerase [Sulfurimonas denitrificans DSM
1251]
Length = 213
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF L ++ I AG +H DVMDG FVPN++ G V+ ++ + +
Sbjct: 1 MKVAPSILSADFGNLQRDVEAICAAGCDYVHVDVMDGHFVPNLTIGPVVVSAIAACATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A + I+FH E H R ++ I ++G K + +NP TP
Sbjct: 61 LDIHLMVENNTFFVDLFAPLKPEYISFHIEEEKHPHRLIQKIRSLGIKPAIVLNPHTPPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+E ++ ++DM+L+M+VNPGFGGQ IES +PK ++ A+ I + + +EVDGGV+ +
Sbjct: 121 AIEYLLADLDMVLLMSVNPGFGGQSFIESVVPKAKKLSAMRDEINPKCL-IEVDGGVSDK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGE 206
N+K L + G D++V GS FN + +
Sbjct: 180 NVKLLKEVGVDIVVAGSYVFNHENK 204
>gi|50548543|ref|XP_501741.1| YALI0C11880p [Yarrowia lipolytica]
gi|49647608|emb|CAG82051.1| YALI0C11880p [Yarrowia lipolytica]
Length = 249
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 131/214 (61%), Gaps = 9/214 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS---YSDS 63
I PSIL++DF++LG + + GA +H D+MDG FVPNISFG V++ LR+ ++
Sbjct: 6 IAPSILSSDFAKLGAQSRMMVDYGADWLHVDIMDGHFVPNISFGPTVVKCLRAELLKGEA 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FDCH+M++ + +ADAG D TFH E+ ++ I A G K G+AI P T V
Sbjct: 66 FFDCHMMVTDPLRWVEPMADAGADQYTFHYEACYDHEEVIKAIKAKGMKAGIAIKPATSV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++ ++D++D++L+MTV PGFGGQ+ + +PK+ A + +R ++++EVDGG+ +
Sbjct: 126 EVVYPLVDQLDLVLVMTVEPGFGGQKFQQDMMPKV----AALRERYPNLNIEVDGGLGPQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGA+++V G+S ++ K + D
Sbjct: 182 TVDDAGAAGANVIVAGTSVYHSDSPPRTIKEMRD 215
>gi|116670234|ref|YP_831167.1| ribulose-5-phosphate 3-epimerase [Arthrobacter sp. FB24]
gi|116610343|gb|ABK03067.1| ribulose-5-phosphate 3-epimerase [Arthrobacter sp. FB24]
Length = 230
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L E+ I+ A A +H DVMD FVPN++ G V++ +++ S D
Sbjct: 6 INPSILSADFVNLEAELHRISNADA--VHVDVMDNHFVPNLTIGLPVVQRIQAVSPVPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ADAG +TFH E+S + R + A G K G+A+ P TPV
Sbjct: 64 AHLMIADADRWAPAFADAGLASVTFHVEASIAPIKLARELRARGAKAGMALRPGTPVEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
D++ E+D++LIMTV PGFGGQ ++ T+PKIR+A+A I ++L+VDGG+T I
Sbjct: 124 LDMLSELDLLLIMTVEPGFGGQSFLDLTLPKIRRARAAIDGSGTGVALQVDGGITEETIV 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+AGA++ V GS+ + + + RL
Sbjct: 184 RAAEAGANVFVAGSAVYGAEDPAAAIDRLR 213
>gi|111224597|ref|YP_715391.1| D-ribulose-5-phosphate 3-epimerase [Frankia alni ACN14a]
gi|111152129|emb|CAJ63856.1| D-ribulose-5-phosphate 3-epimerase (Pentose-5-phosphate
3-epimerase) [Frankia alni ACN14a]
Length = 245
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 122/218 (55%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PS+LAADF RL + + + A +H DVMD FVPN++F D + +LRS + +
Sbjct: 3 TAQIYPSMLAADFGRLADAALAV-EGRADWLHVDVMDYHFVPNLAFSPDAVTALRSTTQT 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E+ +RR+ I A G +TG+A+ P TPV
Sbjct: 62 PLDCHLMIEDPDRWAADYAERGAANVTIHAEAVSDLRRTTAAIRAAGARTGLAVKPNTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D++L+MT+ PGFGGQ+ + +PKI A+ LI R + L++DGGV
Sbjct: 122 ERYLDDLHRFDLLLLMTIEPGFGGQKFMTEVLPKIEAARRLIDDRGLDLWLQIDGGVNEN 181
Query: 182 NIKSLVQAGADLLVVGSSFF--NQKGEISYAKRLNDLK 217
++ AG D+ V G++ F + GE R L+
Sbjct: 182 TVEQAAAAGVDVFVAGTAVFGADDPGEAVEKLRAQALR 219
>gi|256847368|ref|ZP_05552814.1| ribulose-phosphate 3-epimerase [Lactobacillus coleohominis
101-4-CHN]
gi|256716032|gb|EEU31007.1| ribulose-phosphate 3-epimerase [Lactobacillus coleohominis
101-4-CHN]
Length = 217
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 129/217 (59%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + + GA+ +H D+MDG FVP+ISFG ++++R + V
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVDQGGAEYLHIDIMDGSFVPSISFGPGFVKAIRPITKMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + I DAG DII E++ HI R+L+ I G K V INP TPV
Sbjct: 62 LDVHLMVQNPEHIIPAFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ V+ +D +L+MTVNPGFGGQ+ + T+ KI + L +E+DGGV +
Sbjct: 122 MIKPVLHMVDQVLVMTVNPGFGGQKFLPETVEKIAELNQLKKDHGYDFDIEIDGGVNDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGA + V GS + ++ R+N +K +
Sbjct: 182 VVDCYKAGATVAVAGSYVYGADDPVA---RINAIKNA 215
>gi|308177751|ref|YP_003917157.1| ribulose-phosphate 3-epimerase [Arthrobacter arilaitensis Re117]
gi|307745214|emb|CBT76186.1| ribulose-phosphate 3-epimerase [Arthrobacter arilaitensis Re117]
Length = 220
Score = 161 bits (407), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PSIL+ADF+ L E+ I A A +H DVMD FVPN++ G V+ +L S
Sbjct: 2 PNARINPSILSADFANLAAELERIHTADA--VHVDVMDNHFVPNLTLGLPVVDALHKVSK 59
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + D A G D +TFH E+S R R + + G K +A+ P TP
Sbjct: 60 LPIDVHLMIENADRWAPEYAQLGVDSVTFHAEASAAPIRLARELRSAGSKASMALRPATP 119
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ D+I E+DM+L+MTV PGFGGQ+ ++ +PKI++A+A I + I+L+VDGG++
Sbjct: 120 IEPYLDMIGELDMVLLMTVEPGFGGQKFLDLVLPKIKRARAAIEGSGKPIALQVDGGISR 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
I +AGAD+ V GS+ ++ +
Sbjct: 180 DTILRAAEAGADVFVAGSAVYSAQ 203
>gi|171684765|ref|XP_001907324.1| hypothetical protein [Podospora anserina S mat+]
gi|170942343|emb|CAP67995.1| unnamed protein product [Podospora anserina S mat+]
Length = 252
Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 127/236 (53%), Gaps = 36/236 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M P I PSIL+ADF+ LG S K GA +H D+MDG FVPN++FG V+ +R
Sbjct: 1 MAPKAIIAPSILSADFADLGAACSRTIKQGADWLHVDIMDGHFVPNLTFGPPVVVKIRSH 60
Query: 59 ------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPES--------SPH------ 98
S+ FDCH+MI+ + +AGCD+ FH E+ SP
Sbjct: 61 VEKPAESFGKGTFDCHMMIAEPKKWVKEFKNAGCDLYCFHYEAAINSSAAESPEGKSDEK 120
Query: 99 --IRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQL 150
R +R IH G G+AI P TP +L D+I ++ DM+L+MTV PGFGGQQ
Sbjct: 121 TSPRELIRYIHDQGMLAGIAIKPATPANVLFDLIESEDPKEKPDMVLVMTVEPGFGGQQF 180
Query: 151 IESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK+ + + KR +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 MASELPKVEELR----KRYPDLNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAK 232
>gi|24215094|ref|NP_712575.1| ribulose-5-phosphate 3-epimerase [Leptospira interrogans serovar
Lai str. 56601]
gi|24196152|gb|AAN49593.1| ribulose-5-phosphate 3-epimerase [Leptospira interrogans serovar
Lai str. 56601]
Length = 215
Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 126/214 (58%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA + L + + N +H DVMDG FVP ISFG + + ++S +
Sbjct: 1 MKISASILATKLTELVKTVPNYDPTAIDLMHMDVMDGNFVPQISFGEALTKEVKSLTSIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM++ ++H+ + ITFH E++ R + I + G K GV++NP TPV+
Sbjct: 61 LDVHLMVAKPENHVFKYYEFNPYCITFHIETTDFPIRLAQEIKSHGTKVGVSLNPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE+V+ +D+IL+MTV PGF GQ+ I + + KIR+ K LIG R I +EVDGGV NI+
Sbjct: 121 SLENVLPYVDLILLMTVEPGFYGQKFIINGMDKIRKVKELIGSRPIEIEVDGGVNDTNIQ 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + G D++VVG+ + + AK L L +
Sbjct: 181 ELRKNGVDIVVVGAGLYKTGNPVENAKNLKYLAR 214
>gi|242812021|ref|XP_002485872.1| ribulose-phosphate 3-epimerase [Talaromyces stipitatus ATCC 10500]
gi|218714211|gb|EED13634.1| ribulose-phosphate 3-epimerase [Talaromyces stipitatus ATCC 10500]
Length = 252
Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 130/238 (54%), Gaps = 38/238 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF++LG E + + GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFAQLGSECATTIERGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE------------------ 94
FDCH+MI+ ++ AGCD+ FH E
Sbjct: 61 VAKPATPGGKGTFDCHMMIAEPQKWVSEFKSAGCDLYCFHYEAAISSTAAKDPANSSKTT 120
Query: 95 --SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFG 146
+SP R +R IH G K G+AI P+T V +L D+ I+ DM+L+MTV+PGFG
Sbjct: 121 AQTSP--RELIRYIHESGMKAGIAIKPDTKVDVLWDILENEEEIERPDMVLVMTVHPGFG 178
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
GQ+ + S +PK+ + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 179 GQKFMASELPKVTALRQRY--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAK 234
>gi|332654894|ref|ZP_08420636.1| ribulose-phosphate 3-epimerase [Ruminococcaceae bacterium D16]
gi|332516237|gb|EGJ45845.1| ribulose-phosphate 3-epimerase [Ruminococcaceae bacterium D16]
Length = 214
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 125/204 (61%), Gaps = 6/204 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF L +I ++ A +H DVMDGCFVPNI+ G V++S+R +D
Sbjct: 2 IKIAPSILSADFVNLERDIKKVS--SADYLHVDVMDGCFVPNITIGVPVVKSIRKCTDMF 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI +I A AG D+++ H E+ I +L+ + G K VA+ P T
Sbjct: 60 LDVHLMIDKPLRYIEDFAKAGADLLSIHLEADHPTRIAEALKVMGQCGVKKAVALRPITS 119
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTS 180
+ I+E+DM+L+MTV PGFGGQ +ES + IRQ +A+I K + LEVDGG+
Sbjct: 120 ANAILPYIEELDMVLVMTVEPGFGGQAFMESQLDTIRQVRAIIDKYNPACELEVDGGIAP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ +V+AGA++LV GS+ + ++
Sbjct: 180 KTAPLVVEAGANVLVAGSAVYGKE 203
>gi|148270148|ref|YP_001244608.1| ribulose-phosphate 3-epimerase [Thermotoga petrophila RKU-1]
gi|170288907|ref|YP_001739145.1| ribulose-phosphate 3-epimerase [Thermotoga sp. RQ2]
gi|281412510|ref|YP_003346589.1| ribulose-phosphate 3-epimerase [Thermotoga naphthophila RKU-10]
gi|147735692|gb|ABQ47032.1| ribulose-5-phosphate 3-epimerase [Thermotoga petrophila RKU-1]
gi|170176410|gb|ACB09462.1| Ribulose-phosphate 3-epimerase [Thermotoga sp. RQ2]
gi|281373613|gb|ADA67175.1| ribulose-phosphate 3-epimerase [Thermotoga naphthophila RKU-10]
Length = 220
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SILA D +RL +E+ + + IHFDVMDG FVPNISFG V+++LR +
Sbjct: 3 KIAASILACDLARLADEVKRVEEH-VDMIHFDVMDGHFVPNISFGLPVLKALRKETKLPI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
HLMI++ + +I+ + G D++ H ES+ H+ R + + +G + VAINP TP+ +
Sbjct: 62 SVHLMITNPEDYIDRFIEEGADMVAIHYESTFHLHRLVHRVKDLGAQAFVAINPHTPINL 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNI 183
L ++I ++D +L+M+VNPGF GQ+ I ++ KIR + ++ + + E VDGGV N
Sbjct: 122 LSEIITDVDGVLVMSVNPGFSGQRFIARSLEKIRNLRKMVKELGLETEIMVDGGVNEENA 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
LV+ GA +LV+G F + K + ++ +
Sbjct: 182 SILVKNGATILVMGYGIFRNDNYVELIKSIKQEREES 218
>gi|238488705|ref|XP_002375590.1| ribulose-phosphate 3-epimerase [Aspergillus flavus NRRL3357]
gi|317136866|ref|XP_001727342.2| ribulose-phosphate 3-epimerase [Aspergillus oryzae RIB40]
gi|220697978|gb|EED54318.1| ribulose-phosphate 3-epimerase [Aspergillus flavus NRRL3357]
Length = 252
Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 33/235 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S G+ +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFASLGSECSTKMAQGSDWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
D FDCH+MI + +AGCD+ FH P S R
Sbjct: 61 VDRPTQPHGRGTFDCHMMIMEPHKWVKEFKNAGCDLYCFHYEAAVASVAATEPADSTTTR 120
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
++ +R IH G + G+AI P+TPV +L +++ + DM+L+MTV PGFGGQ+
Sbjct: 121 KTSPKELIRYIHEEGMQAGIAIKPDTPVDVLWEILESKDEKERPDMVLVMTVYPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK++ + ++++EVDGG+ + +AGA+++V GS+ F +
Sbjct: 181 FMASELPKVQALRERY--PNLNIEVDGGLGLGTVDQAAEAGANVIVAGSAVFGAQ 233
>gi|284045172|ref|YP_003395512.1| ribulose-phosphate 3-epimerase [Conexibacter woesei DSM 14684]
gi|283949393|gb|ADB52137.1| ribulose-phosphate 3-epimerase [Conexibacter woesei DSM 14684]
Length = 228
Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 121/202 (59%), Gaps = 4/202 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--- 60
+ +I PSIL+ADF+RLG ++ + AGA+ IH DVMDG FVP I+ G V+ +L
Sbjct: 10 ATRIAPSILSADFARLGAQVDEVVAAGARVIHVDVMDGHFVPPITMGPIVVGALAEQVHA 69
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +V D HLMI + + A AG D IT H E++PH+ +L I G AINP
Sbjct: 70 AGAVLDVHLMIERPERQVAEFAKAGADSITVHAEATPHLNYALSAIKDGGCAAAAAINPG 129
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV L +V + +DM L M+VNPG+GGQ I +++ KI + + L+ + ++EVDGGV +
Sbjct: 130 TPVGALAEVAELLDMALCMSVNPGWGGQPFIPASLDKIARLRGLL-PQGTAIEVDGGVDA 188
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
+ GA +LV GS+ F
Sbjct: 189 ATAGPCARHGASVLVAGSAIFG 210
>gi|193671697|ref|XP_001950531.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Acyrthosiphon
pisum]
Length = 227
Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 3/215 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-Y 60
T S +I PS+L AD S+L E + +GA +H DVMDG FVPN++FG V++ LR+
Sbjct: 4 TLSCKIGPSVLNADLSQLYNESQKLIDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRTKL 63
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++VF+ H+M+ + I+ +ADA D TFH E + R I G K G+AI P
Sbjct: 64 PNAVFETHMMVQNPLQWISAMADANVDQYTFHIEPCDDVPLVCRKIKEAGMKVGLAIKPG 123
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +E+ ID DMIL+MTV PGFGGQ+ + +PKI + ++ +EVDGG+
Sbjct: 124 TPVTCVEEYIDMADMILVMTVEPGFGGQKFMTDMMPKIEILRE--KYPTMDIEVDGGIGP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI +AGA+++V G++ K + L D
Sbjct: 182 NNIDVCAKAGANMIVSGTAVIQAKNPPQVIQLLKD 216
>gi|290562469|gb|ADD38630.1| Ribulose-phosphate 3-epimerase [Lepeophtheirus salmonis]
Length = 233
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 127/210 (60%), Gaps = 5/210 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+I PSIL AD S+LG E + GA +H DVMDG FVPN++FGA +++ LRS ++
Sbjct: 8 KIGPSILNADLSQLGTESQCLLDYGADYLHLDVMDGHFVPNLTFGAPLVKCLRSKVKQAM 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+++ + + +++AG D TFH E++ R I G K G+AI P+TPV+
Sbjct: 68 FDMHMMVANPEKWVEDMSNAGADQYTFHIETTNDPLGLCRQIRESGMKVGIAIKPKTPVS 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E ID DMIL+MTV PGFGGQ+ + + K+ + S+ +EVDGGV NI
Sbjct: 128 VVEQYIDSADMILVMTVEPGFGGQKFMHDMMEKVSYLRD--NYPSLDIEVDGGVGPSNIL 185
Query: 185 SLVQAGADLLVVGSSFF--NQKGEISYAKR 212
+AGA+++V G++ N I Y R
Sbjct: 186 DCAKAGANMIVSGTAIVKSNDPKTIMYDMR 215
>gi|315046652|ref|XP_003172701.1| ribulose-phosphate 3-epimerase [Arthroderma gypseum CBS 118893]
gi|311343087|gb|EFR02290.1| ribulose-phosphate 3-epimerase [Arthroderma gypseum CBS 118893]
Length = 252
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 131/248 (52%), Gaps = 37/248 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + K + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMKDDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE------------------ 94
FDCH+MI+ + DAGCD+ FH E
Sbjct: 61 VQRPTSAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVKSTAAKEPSDNSTIA 120
Query: 95 -SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFGG 147
+SP R +R IH +G + G+AI PET V +L ++ I+ DM+L+MTVNPGFGG
Sbjct: 121 QTSP--RELIRYIHELGMQAGIAIKPETSVNVLWEILENKEEIERPDMVLVMTVNPGFGG 178
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
Q+ + S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 179 QKFMASELPKVQALRAKY--PDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAQNPA 236
Query: 208 SYAKRLND 215
+L +
Sbjct: 237 EVIAKLRE 244
>gi|227500116|ref|ZP_03930187.1| ribulose-phosphate 3-epimerase [Anaerococcus tetradius ATCC 35098]
gi|227217831|gb|EEI83128.1| ribulose-phosphate 3-epimerase [Anaerococcus tetradius ATCC 35098]
Length = 221
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 131/217 (60%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ DFS+L E++ G K IH DVMDG FVPNISF +I+ +R +D
Sbjct: 2 VELAPSILSCDFSKLQEDLDATKDTGLKMIHIDVMDGLFVPNISFAFKIIKDIRDKNDYF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I+ +AGCD +T H E+S +++ I A G + G+++ P+T
Sbjct: 62 FDTHLMIVDPIRYIDRFVEAGCDRLTIHYEASDSPLEAIKKIKACGIEAGISLKPKTACE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+ ++ +D +L+M+V PGFGGQ +E ++ K++ + I K S +E+DGG+ + N
Sbjct: 122 KILPLLAYVDAVLVMSVEPGFGGQSFMEESLDKVKFLRKYIDENKLSCKIEIDGGIKTEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEIS-YAKRLND 215
++ ++ AG D +V GS F + +G+I Y + N+
Sbjct: 182 VRRVIAAGCDEIVSGSDIFAKEDIRGQIEKYYQIFNE 218
>gi|159901845|gb|ABX10580.1| ribulose-phosphate 3-epimerase [uncultured planctomycete 5H12]
Length = 234
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP+I +PS+L DF L EI + +AG K +H DVMDG FVPN S+G ++ ++R +
Sbjct: 14 TPAI--LPSLLLCDFGNLEREIEKLHEAGFKSLHLDVMDGVFVPNFSYGITIVEAVRKLT 71
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLM+ ++ A AG D+ITFH E+ R L I G G+A+NP T
Sbjct: 72 DMPLDVHLMMVEPQKYVQQFASAGADLITFHAEAVDDTRPVLEAIRETGIAGGIALNPGT 131
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V+++E+ +D D+ L+M+VN GFGGQ IES + K + I LE+DGG+ +
Sbjct: 132 DVSMIENDLDLCDVFLVMSVNAGFGGQSFIESVLEKFSHIRNAPNGDRILLEIDGGINTD 191
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I G DL V GS+ F Q + RL
Sbjct: 192 TIGQAHAMGVDLFVAGSAIFRQADYRAAHDRL 223
>gi|229552466|ref|ZP_04441191.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus LMS2-1]
gi|258539837|ref|YP_003174336.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus Lc 705]
gi|229314203|gb|EEN80176.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus LMS2-1]
gi|257151513|emb|CAR90485.1| Ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus Lc 705]
Length = 216
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 127/200 (63%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L ++ + +AGA +H DVMDG FV N++FG V+++LR ++
Sbjct: 1 MKIAPSILSADFAHLARDVEKVEQAGADLLHVDVMDGHFVANLTFGPLVVQALRPVTNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+S + A+AG D I H E++ H+ L+ I A G + GV +NP TP++
Sbjct: 61 LEVHLMVSDPAAWAPAFAEAGADTILVHEEATDHLYGVLQHIAATGVRAGVVVNPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
LE+V+ +D +L+MTVNPGFGGQ+ + + + K+ + L R + +EVDGG+ ++
Sbjct: 121 SLEEVLPLVDQVLVMTVNPGFGGQKFLTAMVDKVARLHQLRQDRGLHFDIEVDGGINAKT 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
+K+ AG D+ V GS F+
Sbjct: 181 VKAAADAGTDIFVAGSYVFS 200
>gi|225714476|gb|ACO13084.1| Ribulose-phosphate 3-epimerase [Lepeophtheirus salmonis]
Length = 233
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 127/210 (60%), Gaps = 5/210 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+I PSIL AD S+LG E + GA +H DVMDG FVPN++FGA +++ LRS ++
Sbjct: 8 KIGPSILNADLSQLGTESQCLLDHGADYLHLDVMDGHFVPNLTFGAPLVKCLRSKVKQAM 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+++ + + +++AG D TFH E++ R I G K G+AI P+TPV+
Sbjct: 68 FDMHMMVANPEKWVEDMSNAGADQYTFHIETTNDPLGLCRQIRESGMKVGIAIKPKTPVS 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E ID DMIL+MTV PGFGGQ+ + + K+ + S+ +EVDGGV NI
Sbjct: 128 VVEQYIDSADMILVMTVEPGFGGQKFMHDMMEKVSYLRD--NYPSLDIEVDGGVGPSNIL 185
Query: 185 SLVQAGADLLVVGSSFF--NQKGEISYAKR 212
+AGA+++V G++ N I Y R
Sbjct: 186 DCAKAGANMIVSGTAIVKSNDPKTIMYDMR 215
>gi|225717624|gb|ACO14658.1| Ribulose-phosphate 3-epimerase [Caligus clemensi]
Length = 227
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 123/195 (63%), Gaps = 3/195 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+I PSIL AD LG E + GA +H DVMDG FVPN++FGA V++ LRS +++
Sbjct: 8 KIGPSILNADLCNLGTESQCLLDHGADYLHLDVMDGHFVPNLTFGAPVVKCLRSKVKEAM 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ + + ++DAG D TFH E++ R I G K G+ + P+TPV+
Sbjct: 68 FDMHMMVQDPEKWVEDMSDAGADQYTFHIEATKEPLDLCRKIREAGMKVGIGLKPKTPVS 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E+ I+ DMIL+MTV PGFGGQ+ +E + K+ ++ ++ +EVDGG+ + I+
Sbjct: 128 AVEEYIESADMILVMTVEPGFGGQKFMEDMMEKVSYLRSQY--PTLDIEVDGGIGPKTIR 185
Query: 185 SLVQAGADLLVVGSS 199
+ +AGA+++V G++
Sbjct: 186 QVAKAGANMIVSGTA 200
>gi|220912434|ref|YP_002487743.1| ribulose-phosphate 3-epimerase [Arthrobacter chlorophenolicus A6]
gi|219859312|gb|ACL39654.1| Ribulose-phosphate 3-epimerase [Arthrobacter chlorophenolicus A6]
Length = 226
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 128/217 (58%), Gaps = 4/217 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L E+ I+ A A +H DVMD FVPN++ G V++ +++ S D
Sbjct: 6 INPSILSADFVNLEAELKRISNADA--VHVDVMDNHFVPNLTIGLPVVQRIQAVSPVPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ADAG +TFH E+S + R + G K G+A+ P TPV
Sbjct: 64 AHLMIADADRWAPGFADAGLASVTFHAEASIAPIKLARELRNRGAKAGMALRPSTPVEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
D++ E+DM+LIMTV PGFGGQ ++ T+PKIR+A+A I I +++VDGG+T I
Sbjct: 124 LDMMSELDMLLIMTVEPGFGGQAFLDVTLPKIRRARAAIDGSGIGVAIQVDGGITEETIT 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AGA++ V GS+ + + + RL + +L
Sbjct: 184 RAAEAGANVFVAGSAVYGAEDPGAAIDRLREAGSRSL 220
>gi|199597146|ref|ZP_03210578.1| Pentose-5-phosphate-3-epimerase [Lactobacillus rhamnosus HN001]
gi|258508660|ref|YP_003171411.1| Ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
gi|199591950|gb|EDZ00025.1| Pentose-5-phosphate-3-epimerase [Lactobacillus rhamnosus HN001]
gi|257148587|emb|CAR87560.1| Ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
gi|259649966|dbj|BAI42128.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
Length = 216
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 126/200 (63%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L ++ + +AGA +H DVMDG FV N++FG V+++LR ++
Sbjct: 1 MKIAPSILSADFAHLARDVEKVEQAGADLLHVDVMDGHFVANLTFGPLVVQALRPVTNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+S + A+AG D I H E++ H+ L+ I A G + GV +NP TP++
Sbjct: 61 LEVHLMVSDPAAWAPAFAEAGADTILVHEEATDHLYGVLQHIAATGVRAGVVVNPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
LE+V+ +D +L+MTVNPGFGGQ+ + + + K+ + L R + +EVDGG+ ++
Sbjct: 121 SLEEVLPLVDQVLVMTVNPGFGGQKFLTAMVDKVARLHQLRQDRGLHFDIEVDGGINAKT 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
+K+ AG D+ V GS F
Sbjct: 181 VKAAADAGTDIFVAGSYVFG 200
>gi|261885285|ref|ZP_06009324.1| ribulose-phosphate 3-epimerase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 231
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 127/215 (59%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L +E+ I +AGA +H DVMDG FVPN++ G V+ ++ S
Sbjct: 1 MYVAPSILSADFGKLDDEVKAICEAGADLVHIDVMDGHFVPNLTVGPLVVNAVAKSSSKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ +++ ++FH E H R + I G + +NP TPV+
Sbjct: 61 LDIHLMVENVPFFVDLFLPLKPKFLSFHIEEETHPLRLIEYIRKFGVSPAIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE +++E+DM+L+M+VNPGFGGQ+ I S + KI++ + LI K +EVDGGV N
Sbjct: 121 SLEYIMNEVDMVLLMSVNPGFGGQKFIPSVLKKIKELRDLIEKNGAKCMIEVDGGVHGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L +AG D++V G+ F+ Y + + LK
Sbjct: 181 VSELDEAGVDIVVAGNYEFSSN---DYEQAIKALK 212
>gi|256832543|ref|YP_003161270.1| ribulose-phosphate 3-epimerase [Jonesia denitrificans DSM 20603]
gi|256686074|gb|ACV08967.1| ribulose-phosphate 3-epimerase [Jonesia denitrificans DSM 20603]
Length = 240
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SIQI PSIL+AD++ L E+ IT+A +H DVMD FVPN+++G V+ + S
Sbjct: 2 SIQIAPSILSADYANLESELHRITEA--DWVHVDVMDNHFVPNLTWGLPVVERIAQVSPL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D A+AG +TFH E++ R R + G + G+A+ P T +
Sbjct: 60 PLDTHLMIDNADRWAPQYAEAGSHSVTFHAEATQAPVRLARELRRQGARAGIALRPATGI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
D++ E DM+LIMTV PGFGGQ IES + KIR+ +A I + + ++VDGG++ +
Sbjct: 120 EPYLDLLPEFDMVLIMTVEPGFGGQSFIESMVHKIRRTRAAIDANQLDVWVQVDGGISEK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
I AGA++ V GS+ FN +
Sbjct: 180 TIDQAADAGANVFVAGSAVFNAE 202
>gi|227488842|ref|ZP_03919158.1| ribulose-phosphate 3-epimerase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227091264|gb|EEI26576.1| ribulose-phosphate 3-epimerase [Corynebacterium glucuronolyticum
ATCC 51867]
Length = 282
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAA+++ LGE+I+ + AG IH D+MDG FVPN+SFGADV +++ +D + D
Sbjct: 70 IAPSILAANYAALGEDIAKVDNAG--WIHVDIMDGHFVPNLSFGADVTKAVNEVTDQILD 127
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ +AG D + FH E++ R L + G + G ++ P TP+
Sbjct: 128 VHLMIEEPEKWVDNYIEAGADCVIFHVEATDDPRPLLVALREKGVRAGFSVKPGTPIEDY 187
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D++D D++L+M+V PGFGGQ+ + + K+R + I K+ + +E+DGGV I
Sbjct: 188 LDLVDIADLVLVMSVEPGFGGQKFMPDMLDKVRTLREYIDKKGLRTLIEIDGGVGEGTIT 247
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+AG D V GS+ F + + +L +L
Sbjct: 248 KAAEAGCDAFVAGSAVFGKDDPHAAVDKLKEL 279
>gi|152990069|ref|YP_001355791.1| ribulose-phosphate 3-epimerase [Nitratiruptor sp. SB155-2]
gi|151421930|dbj|BAF69434.1| ribulose-phosphate 3-epimerase [Nitratiruptor sp. SB155-2]
Length = 212
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 127/213 (59%), Gaps = 6/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF L +E+ +I +AGA +H DVMDG FVPN++ G V +++ + + D
Sbjct: 3 VAPSILSADFGILAKEVIDICEAGADLVHVDVMDGHFVPNMTIGPVVAKAVAAVATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ +++ A I+FH ES H R + I G + INP TPV +L
Sbjct: 63 VHLMVEDNSFFVDLFAPLKPKYISFHYESEQHHHRVAQKIRDYGISPAIVINPATPVNVL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E++I +DM+L+M+VNPGFGGQ+ I KI+Q K LI K + S +EVDGGV+ +NI
Sbjct: 123 EEIIKYVDMVLLMSVNPGFGGQKFI-PVFDKIKQTKELIEKHNPSCLIEVDGGVSDKNIH 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AG D+ V GS F K YA+ + LK
Sbjct: 182 ELKAAGVDVAVAGSYVFGHK---DYAQAIASLK 211
>gi|39974639|ref|XP_368710.1| hypothetical protein MGG_00534 [Magnaporthe oryzae 70-15]
gi|145018567|gb|EDK02846.1| hypothetical protein MGG_00534 [Magnaporthe oryzae 70-15]
Length = 251
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 124/235 (52%), Gaps = 35/235 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LGEE S GA +H D+MDG FVPNI+FG V+ +R +
Sbjct: 1 MAPQAIIAPSILSADFGNLGEECSKTIGQGADWLHVDIMDGHFVPNITFGPPVVAKIRGH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPE-----------------S 95
D FDCH+MI+ + AGCD+ FH E +
Sbjct: 61 VDRPEAAHGKGTFDCHMMIAEPKKWVKEFKAAGCDLYCFHYEAAFSSAAEEPSATSDAKT 120
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID------EIDMILIMTVNPGFGGQQ 149
SP R +R IH G G+AI P TP +L +++D DM+L+MTV PGFGGQ+
Sbjct: 121 SP--RELIRYIHDQGLLAGIAIKPATPADVLYELLDSSDAAERPDMVLVMTVEPGFGGQK 178
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK++ + + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 179 FMASELPKVQALRQRYPE--LNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAK 231
>gi|237751727|ref|ZP_04582207.1| ribulose-phosphate 3-epimerase [Helicobacter bilis ATCC 43879]
gi|229373093|gb|EEO23484.1| ribulose-phosphate 3-epimerase [Helicobacter bilis ATCC 43879]
Length = 213
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 121/202 (59%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+Q+ PS+L+A+F L +EI ++ K G +H DVMDG FVPN++ G V+ ++ S+
Sbjct: 1 MQVAPSLLSANFLYLAQEIESVVKGGCDLLHIDVMDGHFVPNMTLGPCVLEGIKDISEIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+ D +++ A ++ H ES H+ R ++ I + G +A+NP TP+
Sbjct: 61 LDIHFMVEDADFFVDLYASLAPKYMSVHIESEKHLHRLIQKIRSYGISPAIALNPHTPLD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ ++ +IDM+LIM+VNPGFGGQQ I + I KI K +I R+ +EVDGG+ N
Sbjct: 121 GLKYILTDIDMVLIMSVNPGFGGQQFIPNMIEKIADLKDMILMRNPQCLIEVDGGINDTN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I +L G D+ V G+ F QK
Sbjct: 181 IHALKNVGVDIAVAGNYIFKQK 202
>gi|302695085|ref|XP_003037221.1| hypothetical protein SCHCODRAFT_49694 [Schizophyllum commune H4-8]
gi|300110918|gb|EFJ02319.1| hypothetical protein SCHCODRAFT_49694 [Schizophyllum commune H4-8]
Length = 230
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 124/202 (61%), Gaps = 4/202 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PS+LA+DF +L E + K GA+ +H DVMDG FVPNI+ GA ++ ++
Sbjct: 2 PRAIISPSVLASDFGQLTAECQRMIKGGAEWLHMDVMDGHFVPNITMGAPILACVKKGIP 61
Query: 63 SVF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+F DCH+M+S+ + ++ IADAG + FH E++P + IH G K G+AI+P+T
Sbjct: 62 DIFMDCHMMVSNPEKWVDDIADAGGALYCFHLEAAPEPLPIIEHIHKRGMKAGLAISPDT 121
Query: 122 PV-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
P AI +++ + DM+L+MTV PG GGQ IE +PK+ + + + I EVDGGV
Sbjct: 122 PASAITDEMANAADMLLVMTVYPGRGGQSFIERCVPKVEELRKRYPNKDI--EVDGGVGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
+ I AG++++V G++ F
Sbjct: 180 KTIDKCAHAGSNVIVAGTAIFG 201
>gi|315925617|ref|ZP_07921827.1| ribulose-phosphate 3-epimerase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621158|gb|EFV01129.1| ribulose-phosphate 3-epimerase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 233
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 114/199 (57%), Gaps = 2/199 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+L+ADFSRLGE + AGA +H D+MDG FVPNI+ G D + LR FD HL
Sbjct: 25 SMLSADFSRLGEHLKQAEAAGADWLHVDIMDGHFVPNITMGPDQVAQLRGAVAIPFDVHL 84
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
MI+ ++I A AG D IT H E L I G K V I+PETP + +
Sbjct: 85 MITHPLAYIERFAKAGADTITVHVECDDDTDACLDLIEKCGVKPAVVISPETPASAVAPY 144
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+D + M+L+M V+PGFGGQ I T K+ + +IG R + LE+DGGV + ++
Sbjct: 145 LDRVRMVLVMGVHPGFGGQSYIPETTAKLAKLHEMIGGRPVRLEIDGGVNFDTLPEILTT 204
Query: 190 GADLLVVGSSFFNQKGEIS 208
GAD +V GS F KG+I+
Sbjct: 205 GADTIVSGSCLF--KGDIA 221
>gi|307264808|ref|ZP_07546370.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306920066|gb|EFN50278.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 183
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 112/166 (67%), Gaps = 2/166 (1%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
MDG FVPNI+ G V++SLR + FD HLMI + D +I A++G DIIT H E+ H
Sbjct: 1 MDGHFVPNITIGPVVVKSLRKFFSLPFDVHLMIENPDLYIEEFANSGADIITVHQEACIH 60
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
+ R+++ I GKK GV++NP T + L+ ++ ++DM+LIMTVNPGFGGQ+ I+S + KI
Sbjct: 61 LHRTIQKIKGYGKKAGVSLNPATSLETLKYILQDVDMVLIMTVNPGFGGQKFIDSMLKKI 120
Query: 159 RQAKAL--IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+ L K +EVDGG+ N+K +V+AGAD++V GS+ F+
Sbjct: 121 EELNKLRETLKLDFKIEVDGGINIHNVKEVVRAGADIIVAGSAIFD 166
>gi|182415416|ref|YP_001820482.1| ribulose-phosphate 3-epimerase [Opitutus terrae PB90-1]
gi|177842630|gb|ACB76882.1| Ribulose-phosphate 3-epimerase [Opitutus terrae PB90-1]
Length = 218
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I + PS+LA D ++L + + G +H D+MDG FVPN+SFG + +LR +
Sbjct: 1 MHPPI-LAPSLLAGDHAQLATSARIVEELGLPWLHLDIMDGHFVPNLSFGPATLTALRRH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ FD HLM+S +I A AG + I+ H E + +L IHA+G + G+ +NP
Sbjct: 60 GIKAYFDTHLMLSQPARYIEPFAKAGANQISIHIEPTYDHADTLDRIHALGCQAGIVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
+TP + +E ++ +D++L+MTV PGFGGQ + +PKIRQ +R+++ LEVDGG
Sbjct: 120 DTPASAVEPLLARVDLVLVMTVQPGFGGQSFRAAMLPKIRQLDQWRSERALTFRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + AGAD V G+SFF + ++A L
Sbjct: 180 IDLETARQCRAAGADTFVAGTSFFGAPDKPAFAAAFAQL 218
>gi|157364706|ref|YP_001471473.1| ribulose-phosphate 3-epimerase [Thermotoga lettingae TMO]
gi|157315310|gb|ABV34409.1| Ribulose-phosphate 3-epimerase [Thermotoga lettingae TMO]
Length = 216
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 131/213 (61%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SILA+D SRL EE+ + + IH DVMDG FVPNI+FG V+ ++R +D D
Sbjct: 4 ISASILASDLSRLSEEVKRV-EPYIDMIHLDVMDGVFVPNITFGFPVLEAVRKCTDLPID 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ D G II H E+ H+ + + I G + VA+NP TP+ +L
Sbjct: 63 AHLMIINPEKYVERFIDLGASIIAVHYEACVHLHKVVYQIKDKGAQAYVALNPHTPIEML 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNIK 184
++++++D +LIMTVNPGF GQ+ I+S++ KIR+ +I K+ + + VDGG+ ++
Sbjct: 123 SEILEDLDGVLIMTVNPGFSGQKFIQSSVEKIRKLSEMIQKKGLKTKIMVDGGINENTVE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+V +GA++LV+G F S+ ++L +K
Sbjct: 183 KVVCSGAEILVMGYGIFRSDFA-SFKRKLEAIK 214
>gi|86741874|ref|YP_482274.1| ribulose-5-phosphate 3-epimerase [Frankia sp. CcI3]
gi|86568736|gb|ABD12545.1| ribulose-5-phosphate 3-epimerase [Frankia sp. CcI3]
Length = 236
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PS+LAADF R+ + + + A +H DVMD FVPN++F D + +LR+ +D+
Sbjct: 3 TAQIYPSLLAADFGRIADAALAV-EGQADWLHVDVMDYHFVPNLAFAPDTVTALRAVTDT 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E+ + R+ R I A G +TG+A+ P TPV
Sbjct: 62 PLDCHLMIDDPDRWAAGYAERGAANVTIHAEAVSDLPRTTRAIRAAGARTGLAVKPNTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D++L+MT+ PGFGGQ + +PKI A+ L+ R + L++DGGV +
Sbjct: 122 EHYLDDLHRFDLLLLMTIEPGFGGQTFMTEVLPKIEAARRLLDARGLDLWLQIDGGVNAG 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ AG D+ V G++ F +RL +
Sbjct: 182 TIERAAVAGVDVFVAGTAVFGAADPGQAVERLRE 215
>gi|119481909|ref|XP_001260983.1| ribulose-phosphate 3-epimerase [Neosartorya fischeri NRRL 181]
gi|119409137|gb|EAW19086.1| ribulose-phosphate 3-epimerase [Neosartorya fischeri NRRL 181]
Length = 252
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 128/235 (54%), Gaps = 33/235 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFAVLGNECSTKIAQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
D FDCH+MI + AGCD+ FH PE R
Sbjct: 61 VDRPTQALGKGTFDCHMMIMEPHKWVKEFKSAGCDLYCFHYEAAISSVAATTPEDKETTR 120
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 PTSPKELIRYIHDEGMQAGIAIKPDTPVDVLWDILENKDEKERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK++ + +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVKALRERY--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAQ 233
>gi|116192425|ref|XP_001222025.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181843|gb|EAQ89311.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 252
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 124/234 (52%), Gaps = 32/234 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E S + GA +H D+MDG FVPN++FG V+ +RS+
Sbjct: 1 MAPKAIIAPSILSADFANLGAECSRTIEQGADWLHVDIMDGHFVPNLTFGPPVVAKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPES--------SPHI----- 99
D FDCH+MI+ + AGCD+ FH E+ SP
Sbjct: 61 VDKPTESHGKGTFDCHMMIAEPKKWVKEFKAAGCDLYCFHYEAAVNSTAAESPEAHSEHK 120
Query: 100 ---RRSLRTIHAMGKKTGVAINPETPVAILEDVID------EIDMILIMTVNPGFGGQQL 150
R +R IH G G+AI P T +L +V+D DM+L+MTV PGFGGQ+
Sbjct: 121 TSPRELIRYIHQQGMLAGIAIKPATKADVLYEVLDSPDETERPDMVLVMTVEPGFGGQKF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK+ +A +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 MASELPKVEALRARY--PDLNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAK 232
>gi|227542163|ref|ZP_03972212.1| ribulose-phosphate 3-epimerase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227181992|gb|EEI62964.1| ribulose-phosphate 3-epimerase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 288
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAA+++ LGE+I+ + AG IH D+MDG FVPN+SFGADV +++ +D + D
Sbjct: 76 IAPSILAANYAALGEDIAKVDNAG--WIHVDIMDGHFVPNLSFGADVTKAVNEVTDQILD 133
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ +AG D + FH E++ R L + G + G ++ P TP+
Sbjct: 134 VHLMIEEPEKWVDNYIEAGADCVIFHVEATDDPRPLLVALREKGVRAGFSVKPGTPIEDY 193
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D++D D++L+M+V PGFGGQ+ + + K+R + I K+ + +E+DGGV I
Sbjct: 194 LDLVDIADLVLVMSVEPGFGGQKFMPDMLDKVRTLREYIDKKGLRTLIEIDGGVGEGTIT 253
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+AG D V GS+ F + + +L +L
Sbjct: 254 KAAEAGCDAFVAGSAVFGKDDPHAAVDKLKEL 285
>gi|71002346|ref|XP_755854.1| ribulose-phosphate 3-epimerase [Aspergillus fumigatus Af293]
gi|66853492|gb|EAL93816.1| ribulose-phosphate 3-epimerase [Aspergillus fumigatus Af293]
gi|159129911|gb|EDP55025.1| ribulose-phosphate 3-epimerase [Aspergillus fumigatus A1163]
Length = 313
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 131/233 (56%), Gaps = 35/233 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 62 MSPPAIIAPSILSADFAVLGNECSTKIAQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 121
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPES--------SPHIRRS-- 102
D FDCH+MI + AGCD+ FH E+ +P + +
Sbjct: 122 VDRPTQALGKGTFDCHMMIMEPHKWVKEFKSAGCDLYCFHYEAAISSVAAMTPEDKETSR 181
Query: 103 -------LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 182 LTSPKELIRYIHDEGMQAGIAIKPDTPVDVLWDILENKDEKERPDMVLVMTVHPGFGGQK 241
Query: 150 LIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ S +PK+ KAL + +++EVDGG+ I AGA+++V GS+ F
Sbjct: 242 FMASELPKV---KALRERYPDLNIEVDGGLGLGTIDQAADAGANVIVAGSAVF 291
>gi|254446116|ref|ZP_05059592.1| ribulose-phosphate 3-epimerase [Verrucomicrobiae bacterium DG1235]
gi|198260424|gb|EDY84732.1| ribulose-phosphate 3-epimerase [Verrucomicrobiae bacterium DG1235]
Length = 218
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD +RL ++I + A +H D+MDG FVPN++FG + LR ++ D
Sbjct: 6 LAPSMLAADHTRLADDIKGVEAAECSWLHVDIMDGHFVPNLTFGPQTVADLRPKTELFLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + + + AG D +T H E S I +L I +G K GV NP TP + +
Sbjct: 66 VHLMLDNPQDFVELFIKAGADQVTIHVEPSYDISATLLKIRELGAKCGVVFNPGTPASAV 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ +D++D++L MTV PGFGGQ ES + K Q A +R++ ++VDGG+ + N
Sbjct: 126 QPYLDQVDIVLAMTVQPGFGGQSFQESVLEKTSQIAAWRQERNLDFRIQVDGGINAENAP 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
QAG D V G++FF K + + + L
Sbjct: 186 LCRQAGVDTFVAGTAFFKSKDRNLFRQNIETL 217
>gi|307719345|ref|YP_003874877.1| ribulose-phosphate 3-epimerase [Spirochaeta thermophila DSM 6192]
gi|306533070|gb|ADN02604.1| ribulose-phosphate 3-epimerase [Spirochaeta thermophila DSM 6192]
Length = 215
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 6/206 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSV 64
++ SIL A+F+RLG+EI + ++H DVMDG +V NISFG VI +LR +S V
Sbjct: 3 KLSASILNANFARLGDEIREVEDL-IDELHLDVMDGHYVDNISFGLPVIGTLRKEFSSLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS + + +AG DI+ FH E++ L+ I G+ G+++NP T V
Sbjct: 62 FDTHLMISHPERYWEEFIEAGSDILVFHLEATTKAFLILQRIKEKGRLAGISLNPATDVR 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+LE V D +D +LIMTV PGFGGQ+ + + KI +A+ L+G R + +EVDGG+ I
Sbjct: 122 LLEPVKDILDRVLIMTVEPGFGGQRFLTPMLRKIERARELLGDR-VDIEVDGGINPTTIA 180
Query: 185 SLVQAGADLLVVGSSFF---NQKGEI 207
AGA VVGSS F +++GEI
Sbjct: 181 EARSAGATTFVVGSSIFQSEDKRGEI 206
>gi|224541742|ref|ZP_03682281.1| hypothetical protein CATMIT_00914 [Catenibacterium mitsuokai DSM
15897]
gi|224525346|gb|EEF94451.1| hypothetical protein CATMIT_00914 [Catenibacterium mitsuokai DSM
15897]
Length = 214
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 122/203 (60%), Gaps = 3/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF+ L E+I I G IH+DVMDG FVPNISFG ++ ++R+ +D
Sbjct: 2 VKIAPSVLSADFAHLKEDIDTIYDGGKSWIHYDVMDGHFVPNISFGYSILSNVRAVTDLF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS---LRTIHAMGKKTGVAINPET 121
D HLMI+ +++ +AG D+ITFH E+ ++ + ++ IH G ++I P T
Sbjct: 62 IDVHLMITDPGQYLDEFINAGADLITFHIEAVSSVQEARVLIQRIHDAGCLASISIKPGT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V ++ +D++DM+L+M+V PGFGGQ S + KI + K + R +EVDGG+
Sbjct: 122 DVEAVKPFLDDLDMVLVMSVEPGFGGQSFNPSALDKITELKEIRNDRRYLIEVDGGINEN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
AGAD+LV GS F +
Sbjct: 182 TANLCRGAGADVLVAGSYVFKAE 204
>gi|118463895|ref|YP_882552.1| ribulose-phosphate 3-epimerase [Mycobacterium avium 104]
gi|254775816|ref|ZP_05217332.1| ribulose-phosphate 3-epimerase [Mycobacterium avium subsp. avium
ATCC 25291]
gi|118165182|gb|ABK66079.1| ribulose-phosphate 3-epimerase [Mycobacterium avium 104]
Length = 232
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 129/217 (59%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRL +E + +T GA +H DVMD FVPN++ G V++SL + + D
Sbjct: 13 IAPSILSADFSRLADEAAAVT--GADWLHVDVMDNHFVPNLTIGLPVVQSLLATTTIPMD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 71 CHLMIENPDRWAPPYAEAGAHNVTFHAEATDNPIGVARDIRAAGAKAGISVKPGTPLEPY 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ + D +LIM+V PGFGGQ I + K+R A+ LI G+ +I +E+DGG+ + I+
Sbjct: 131 LEILPQFDTLLIMSVEPGFGGQSFIPEVLGKVRTARKLIDAGELTILVEIDGGINADTIE 190
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AG D V GS+ + G A + L++ AL
Sbjct: 191 QAAEAGVDCFVAGSAVY---GADDPAAAVEALRRQAL 224
>gi|239618304|ref|YP_002941626.1| ribulose-phosphate 3-epimerase [Kosmotoga olearia TBF 19.5.1]
gi|239507135|gb|ACR80622.1| ribulose-phosphate 3-epimerase [Kosmotoga olearia TBF 19.5.1]
Length = 215
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSILAADF+ L EI I A IH DVMDG FVPNI+FG ++ +L D H
Sbjct: 6 PSILAADFANLSAEIDKIKDADF--IHVDVMDGVFVPNITFGTPIMEALNKLDTPPLDVH 63
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LMI + +I A+ G I+ H E+ H+ R + I ++ + VA+NP TPV+ LE+
Sbjct: 64 LMIDNPSQYIEKFANLGASILAVHIEAERHLHRLVDRIKSLDVEAFVAVNPHTPVSALEE 123
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNIKSL 186
+I +D +LIMTVNPGF GQ I T KI + L ++ ++ VDGG+ +N +++
Sbjct: 124 IIQFVDGVLIMTVNPGFTGQSFIPETAQKIAKLDHLRKEKGLNFRIAVDGGINLKNAQTV 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V GAD+L++G++ F + +++ +LKK
Sbjct: 184 VDYGADILIMGAAIFRSENPAEVIQKVKELKK 215
>gi|309810707|ref|ZP_07704515.1| ribulose-phosphate 3-epimerase [Dermacoccus sp. Ellin185]
gi|308435338|gb|EFP59162.1| ribulose-phosphate 3-epimerase [Dermacoccus sp. Ellin185]
Length = 227
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 124/218 (56%), Gaps = 7/218 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L E+ I A H DVMD FVPN++ G V+ SL S
Sbjct: 10 VRISPSILSADFANLERELDAINNA--DWAHVDVMDNHFVPNLTLGLPVVESLLKVSPIP 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D A+AGC +TFH E++ ++ R I A G + +AI P TP
Sbjct: 68 LDAHLMIDDPDRWAPAYAEAGCKSVTFHVEAAADPKKLARDIRAAGARASMAIKPNTPWE 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
D++ E+DM+L+MTV PGFGGQ + +PK+R + I + ++VDGGV+++
Sbjct: 128 PYADLLPELDMVLVMTVEPGFGGQSFMAEQMPKVRAVRESIRTHGGDVWVQVDGGVSAKT 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD V GS+ + G S A +++L+ A
Sbjct: 188 IEQCAEAGADTFVAGSAVY---GAESAAAAIDELRALA 222
>gi|254458171|ref|ZP_05071597.1| ribulose-phosphate 3-epimerase [Campylobacterales bacterium GD 1]
gi|207085007|gb|EDZ62293.1| ribulose-phosphate 3-epimerase [Campylobacterales bacterium GD 1]
Length = 214
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQ+ PS+L+ADF L ++ I AG +H DVMDG FVPN++ G V+ ++ + +
Sbjct: 2 IQVAPSVLSADFGNLQRDVEAICDAGCDLVHVDVMDGHFVPNLTIGPVVVSAIAACATKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A I+FH E H R ++ I ++G K + +NP TP
Sbjct: 62 LDIHLMVENNTFFVDLFAPLKPAYISFHIEEEKHPHRLIQKIRSLGIKPAIVLNPHTPPE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ ++DMIL+M+VNPGFGGQ I++ IPK + + + + + ++VDGGVT +N
Sbjct: 122 SVEYLLQDLDMILLMSVNPGFGGQSFIDTVIPKASKLNEMRNRLNPNCLIQVDGGVTDKN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I+SL AG D++V GS FN + K L
Sbjct: 182 IQSLKDAGVDVVVAGSYVFNHASKKEAIKSL 212
>gi|320160926|ref|YP_004174150.1| ribulose-phosphate 3-epimerase [Anaerolinea thermophila UNI-1]
gi|319994779|dbj|BAJ63550.1| ribulose-phosphate 3-epimerase [Anaerolinea thermophila UNI-1]
Length = 224
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 132/219 (60%), Gaps = 6/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S ++ S+L+ADF L +++ + +AG +IH DVMDG FVPN++ G ++ +L+ +
Sbjct: 3 SFRLCASVLSADFRCLEDQVKQLEEAGVDEIHVDVMDGHFVPNLTMGPFIVSTLKRITHL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + D I A+AG ++ E+ PHI R+L+ IH++G + GV +NP TP
Sbjct: 63 PLDVHLMVENPDRMIPWYAEAGAHRLSVQVETCPHIHRTLQNIHSLGCEAGVVLNPGTPA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTS 180
+ LE+V+ D+IL+MTVNPGF GQ + +PKI + + L+ R++ ++VDGG+
Sbjct: 123 SWLEEVVSHADLILVMTVNPGFSGQSFLPEVLPKIAKVRDLVENSHSRAV-IQVDGGIDQ 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + + AGA +V ++ F I +N L++S
Sbjct: 182 KTLPLVYAAGARYIVSATAIFKHPEGIKAG--VNALRES 218
>gi|222824027|ref|YP_002575601.1| D-ribulose-5-phosphate 3-epimerase [Campylobacter lari RM2100]
gi|222539249|gb|ACM64350.1| D-ribulose-5-phosphate 3-epimerase [Campylobacter lari RM2100]
Length = 215
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 123/202 (60%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F L EI ++ +AGA +H DVMDG FVPN++FG VI ++ +
Sbjct: 1 MYVAPSLLSANFLNLENEIKDVCEAGADLLHIDVMDGHFVPNLTFGPCVIENISKITSVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ S +++ I+FH E+ H R I G + +NP TPV+
Sbjct: 61 LDVHLMVHNVSSFVDLFIPIKPKFISFHIEAENHPIRVCEYIRKNGIHPAIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +++ +DM+L+M+VNPGFGGQ + KIRQ + +I ++++ +EVDGGV N
Sbjct: 121 SIEHILEFVDMVLLMSVNPGFGGQNFLPLVYDKIRQLREMIDRKNLKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
L +AGAD+LV GS F+ +
Sbjct: 181 APDLDEAGADILVAGSYIFSSQ 202
>gi|296805692|ref|XP_002843670.1| ribulose-phosphate 3-epimerase [Arthroderma otae CBS 113480]
gi|238844972|gb|EEQ34634.1| ribulose-phosphate 3-epimerase [Arthroderma otae CBS 113480]
Length = 251
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 132/241 (54%), Gaps = 38/241 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + K + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMKDNSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPE------------------ 94
+ FDCH+MI+ + DAGCD+ FH E
Sbjct: 61 VERPATAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVNSTAAKEPSGTSTEQ 120
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQ 148
+SP + +R IH +G + G+AI PET V +L +++ + DM+L+MTVNPGFGGQ
Sbjct: 121 TSP--KELIRYIHELGMQAGIAIKPETSVDVLWNILESKEEAERPDMVLVMTVNPGFGGQ 178
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK--GE 206
+ + S +PK++ +A +++EVDGG+ I AGA+++V GS+ F + GE
Sbjct: 179 KFMASELPKVKALRAKY--PDMNIEVDGGLGIGTIDQAADAGANVIVAGSAVFGAQDPGE 236
Query: 207 I 207
+
Sbjct: 237 V 237
>gi|145224310|ref|YP_001134988.1| ribulose-phosphate 3-epimerase [Mycobacterium gilvum PYR-GCK]
gi|315444642|ref|YP_004077521.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. Spyr1]
gi|145216796|gb|ABP46200.1| ribulose-5-phosphate 3-epimerase [Mycobacterium gilvum PYR-GCK]
gi|315262945|gb|ADT99686.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. Spyr1]
Length = 225
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 127/220 (57%), Gaps = 4/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PSILAADF+RL EE + + GA +H DVMD FVPN++ G V+ SL +D
Sbjct: 2 PKPLIAPSILAADFARLAEEAAAVD--GADWLHVDVMDNHFVPNLTLGLPVVESLLKVTD 59
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLMI + + A+AG +T H E++ + R I A G K G++I P TP
Sbjct: 60 IPMDCHLMIENPERWAPPYAEAGAYNVTIHAEATDNPVAVARDIRAAGAKAGLSIKPGTP 119
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ +++ E D +L+M+V PGFGGQ+ I +PK+ A+ L+ G+ +I +E+DGG+ +
Sbjct: 120 IEPYLEILREFDTLLVMSVEPGFGGQKFIAEVLPKVGIARRLVDSGELTIVIEIDGGINA 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AG D V GS+ ++ + + + L +A
Sbjct: 180 DTIEEAAEAGVDCFVAGSAVYSAEDPAAAVQSLRSQAAAA 219
>gi|46200200|ref|YP_005867.1| ribulose-phosphate 3-epimerase [Thermus thermophilus HB27]
gi|55980075|ref|YP_143372.1| ribulose-phosphate 3-epimerase [Thermus thermophilus HB8]
gi|46197828|gb|AAS82240.1| ribulose-phosphate 3-epimerase [Thermus thermophilus HB27]
gi|55771488|dbj|BAD69929.1| ribulose-phosphate 3-epimerase [Thermus thermophilus HB8]
Length = 220
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 126/202 (62%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PSIL AD +RLGE I AG IH DVMDG FVPN++FG ++ ++R +
Sbjct: 4 VRFAPSILTADLARLGEAIREAEAAGVDWIHLDVMDGVFVPNLTFGPLLVEAVRRVTSLP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ A AG D IT H E++ H R+++ + +GKK G+A+NP TP+
Sbjct: 64 LDVHLMIVKPERYLEDFAQAGADHITVHFEATYHPHRAVQKVKELGKKAGLAVNPGTPLE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
E ++ ++D+ L+M+VNPGFGGQ+ + + ++R+ KA+ + + + + VDGG+
Sbjct: 124 AFEPLLPDLDLALLMSVNPGFGGQRYLPTATERLRRLKAMRDRLNPACLIVVDGGINRDT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ +AGAD+ V GS+ FN K
Sbjct: 184 VAEARRAGADVAVAGSALFNDK 205
>gi|288573286|ref|ZP_06391643.1| ribulose-phosphate 3-epimerase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569027|gb|EFC90584.1| ribulose-phosphate 3-epimerase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 232
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 133/221 (60%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
S++I PS+L+AD + + I+++ +H DVMDG FVPN+S+G+ ++ +LR +Y D
Sbjct: 11 SLRIAPSLLSADPLSMSDSIASLNGT-HDWLHVDVMDGHFVPNLSYGSALVGALRKAYPD 69
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLM+ +S I D D +T H E++PH+ R L I G + GV +NP TP
Sbjct: 70 EVLDVHLMVEPPESFIESFLDKNPDFLTVHVEATPHLHRVLSRIRERGARPGVVLNPGTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V + V+ +DM+L+M+VNPGFGGQ I T+ K+ L R +S +E+DGGV +
Sbjct: 130 VDAIFPVLSMVDMVLVMSVNPGFGGQSFIPETLSKLVDLCRLRASRKLSFLIEIDGGVGA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
N+ +V+ GAD+ V+GS+ F G K + ++K AL
Sbjct: 190 GNVAEIVRFGADVAVMGSAVF---GTDDPGKTVEKIRKIAL 227
>gi|108799352|ref|YP_639549.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. MCS]
gi|119868468|ref|YP_938420.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. KMS]
gi|126435010|ref|YP_001070701.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. JLS]
gi|108769771|gb|ABG08493.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. MCS]
gi|119694557|gb|ABL91630.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. KMS]
gi|126234810|gb|ABN98210.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. JLS]
Length = 224
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 127/216 (58%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +E + +T GA +H DVMD FVPN++ G V+ SL +D D
Sbjct: 6 IAPSILSADFARLADETAAVT--GADWLHVDVMDNHFVPNLTLGLPVVESLLKVTDIPMD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + + A+AG +TFH E++ + R I A G K G+A+ P TP+
Sbjct: 64 CHLMIENPERWAPPYAEAGAHNVTFHAEATDNPIAVARDIRAAGAKAGLAVKPGTPIDPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ E D +L+M+V PGFGGQ+ I +PK+ + L+ G+ ++ +E+DGG+ I
Sbjct: 124 LEILREFDTLLVMSVEPGFGGQKFIPEVLPKVGIVRRLVDSGELTVLVEIDGGINEDTIA 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG D V GS+ ++ + + + L + +A
Sbjct: 184 AAAEAGVDCFVAGSAVYSAQDPAAAVRSLREQAAAA 219
>gi|32266845|ref|NP_860877.1| ribulose-phosphate 3-epimerase [Helicobacter hepaticus ATCC 51449]
gi|32262897|gb|AAP77943.1| ribulose-phosphase 3-epimerase [Helicobacter hepaticus ATCC 51449]
Length = 216
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 131/219 (59%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I + PS+L+ADF++LG+E+ +I KAG +H DVMDG FVPN++ G +++S+
Sbjct: 1 MNKDILVAPSMLSADFAKLGQEVEDICKAGCDFVHIDVMDGHFVPNLTMGPMIVQSIAKS 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLM+ ++ +++ ++ H E H+ R + I G K GV +NP
Sbjct: 61 SSKPLDIHLMVKNVPFFVDLFLPLKPAFMSVHIEEVQHLHRLIWYIKESGVKAGVVLNPH 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T LE ++ +ID++L+M+VNPGFGGQ I ++ K++ K + + + S LE+DGGV
Sbjct: 121 TNEQSLEYILPDIDLVLLMSVNPGFGGQSFIPHSVKKLQNLKKMRDRLNPSCLLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +NI L AG D++V GS F G YA+ ++ L+
Sbjct: 181 SDKNIDILKNAGIDIVVAGSFIF---GSTDYAQAISALR 216
>gi|57242276|ref|ZP_00370215.1| ribulose-phosphate 3-epimerase [Campylobacter upsaliensis RM3195]
gi|57016956|gb|EAL53738.1| ribulose-phosphate 3-epimerase [Campylobacter upsaliensis RM3195]
Length = 215
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 121/200 (60%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EEI +++AGA +H DVMDG FV N++FG V+ + S S
Sbjct: 1 MYVAPSLLSANFLKLEEEIKAVSEAGADLLHIDVMDGHFVSNLTFGPCVLEKISSISSVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + ++FH E+ H + + G + +NP TP++
Sbjct: 61 LDVHLMVKDVSKFVELFLPLKPKFLSFHIEAEAHPIKLCEYLRTQGIHPAITLNPHTPIS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
LE +I+ +DM+L+M+VNPGFGGQ+ + KIR+ +ALI K+ + +EVDGGV N
Sbjct: 121 SLEHLIEFVDMVLLMSVNPGFGGQKFLPLVYDKIRELRALIEKKQAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
L +AGAD+LV G+ F+
Sbjct: 181 AADLEEAGADILVAGNYIFS 200
>gi|296117962|ref|ZP_06836545.1| ribulose-phosphate 3-epimerase [Corynebacterium ammoniagenes DSM
20306]
gi|295969193|gb|EFG82435.1| ribulose-phosphate 3-epimerase [Corynebacterium ammoniagenes DSM
20306]
Length = 230
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 7/215 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RLGEE++ ++ A IH D+MDG FVPN+SFG D+ ++ ++ V D
Sbjct: 14 ISPSILAADFTRLGEEVATVSNA--DWIHVDIMDGHFVPNLSFGPDITAAVDGITEQVLD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINPETPV 123
HLMI + + A AG D I FH E+ + +L I +G + G +I P TP+
Sbjct: 72 VHLMIEEPEKWVETYAKAGADCIIFHVEAVEDEQAALDLAAKIRGLGVRAGFSIKPNTPI 131
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
D + D++L+M+V PGFGGQ+ + + K+R +A I ++ + + E+DGG+++
Sbjct: 132 EPWLDKLSHFDLVLVMSVEPGFGGQKFMPEMLDKVRALRAAIDEQQLPMLIEIDGGISAD 191
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I+ +AG D V GS+ F + + L L
Sbjct: 192 TIRQSAEAGCDAFVAGSAIFKKDDRAAEVDNLRQL 226
>gi|330923081|ref|XP_003300090.1| hypothetical protein PTT_11244 [Pyrenophora teres f. teres 0-1]
gi|311325943|gb|EFQ91823.1| hypothetical protein PTT_11244 [Pyrenophora teres f. teres 0-1]
Length = 252
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 132/246 (53%), Gaps = 34/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG+ S+ GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFGALGKACSDTISQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPES--------SPHIRRS-- 102
D FDCH+MI+ + AGCD+ FH E+ SP +
Sbjct: 61 VDRPTVAHGKGTFDCHMMIAEPKRWVRDFKKAGCDLYCFHYEAAVSSTAADSPSGKSDKQ 120
Query: 103 ------LRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQL 150
+R IH G + G+AI P TPV +L ++++ DM+L+MTV PGFGGQ
Sbjct: 121 TSPQDLIRFIHTEGMQAGIAIKPSTPVDVLWEILENPNKEEVPDMVLVMTVEPGFGGQSF 180
Query: 151 IESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ AL K + +EVDGG++ + I AGA+++V GS+ F
Sbjct: 181 MASELPKV---TALRKKYPELHIEVDGGLSEKTIDQAADAGANVIVAGSAVFGASDPGDV 237
Query: 210 AKRLND 215
K+L +
Sbjct: 238 IKKLRE 243
>gi|322378998|ref|ZP_08053401.1| ribulose-phosphate 3-epimerase [Helicobacter suis HS1]
gi|321148490|gb|EFX42987.1| ribulose-phosphate 3-epimerase [Helicobacter suis HS1]
Length = 228
Score = 159 bits (401), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 130/215 (60%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SIL+ADF L + I+ + G +H DVMDG FVPN++FG V+++L Y +
Sbjct: 19 MEIAASILSADFMDLKQSITRV--HGVDLLHVDVMDGHFVPNLTFGPCVLKNLDQYFNIP 76
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ + +T H ES PHI +++ I ++G K G+++NP TP+
Sbjct: 77 LDIHLMVDNPLFCIDLYSSLRPRYVTIHLESIPHIHKTIHYIKSLGFKAGISLNPATPLC 136
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE ++D++D++L M+VNPGFGGQ+ + + KI K + +EVDGG+ + N K
Sbjct: 137 GLEYILDDLDLVLFMSVNPGFGGQKFLPLILKKITHFKQRFPHYTGKIEVDGGINADNAK 196
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L GA +LVVGS F+ + A L +L+KS
Sbjct: 197 DLWACGAHVLVVGSYLFSHENP---ALALKELRKS 228
>gi|301118582|ref|XP_002907019.1| ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]
gi|262108368|gb|EEY66420.1| ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]
Length = 232
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 122/201 (60%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+LA+D S L +E + AGA +H DVMDG FVPNIS+G VI+SLR ++ +
Sbjct: 6 TCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTKA 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FDCH+M+S + + IA AG D TFH E++ ++ I G K G+AI P T
Sbjct: 66 FFDCHMMVSKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+D +DM+L+MTV PGFGGQ + + K++ +A ++ +EVDGG+ I
Sbjct: 126 EAAFPYVDLVDMVLVMTVEPGFGGQSFMTDMMTKVKIIRAKY--PALDIEVDGGLGPSTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ +AGA+++V GSS F +
Sbjct: 184 DAAAKAGANMIVAGSSVFKAE 204
>gi|116492601|ref|YP_804336.1| ribulose-5-phosphate 3-epimerase [Pediococcus pentosaceus ATCC
25745]
gi|116102751|gb|ABJ67894.1| ribulose-5-phosphate 3-epimerase [Pediococcus pentosaceus ATCC
25745]
Length = 215
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 138/216 (63%), Gaps = 7/216 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD + L +I+ + GA +H DVMDG FVPN+SFG + ++ L +D
Sbjct: 2 IKVAPSILSADPANLMGDINKVE--GADYLHVDVMDGSFVPNLSFGLNTVQGLSKDTDIK 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++++ AG I+ H ES+ HI R+++ I G + V +NP TP+
Sbjct: 60 LDVHLMIQNPENYVEQFVKAGASIVGVHVESTQHIARAIQIIKNAGARAEVVVNPGTPLT 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE+++ EID +LIM+VNPGFGGQ+ +ES+I K+++ AL R + +E+DGG++ +N
Sbjct: 120 ELEELLPEIDQVLIMSVNPGFGGQKFLESSISKVKRLSALRQARGLEFDIEIDGGISDKN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK++ AG D+ V GS F G Y K++ LK+
Sbjct: 180 IKAVYDAGVDVAVAGSYVF---GAEDYTKQVQLLKE 212
>gi|319955909|ref|YP_004167172.1| ribulose-5-phosphate 3-epimerase [Nitratifractor salsuginis DSM
16511]
gi|319418313|gb|ADV45423.1| ribulose-5-phosphate 3-epimerase [Nitratifractor salsuginis DSM
16511]
Length = 213
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ LGEE+ ++ AGA IH DVMDG FVPN++ G V+ + S D
Sbjct: 3 VAPSILSADFAYLGEEVRSVCDAGADLIHVDVMDGHFVPNMTIGPVVVEGVARSSTKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A + I+FH ES H R I +G + + +NP T +
Sbjct: 63 VHLMVEDNNFFVDLFAPLKPEFISFHFESERHPNRLATKIRDLGIRPSLVLNPHTLPEVT 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E ++ +DM+L+M+VNPGFGGQ+ I + + ++ K LI KR+ +EVDGGV+ +NI
Sbjct: 123 EYLLPYLDMVLLMSVNPGFGGQKFIPDVVERAKRLKDLIEKRNPDCLIEVDGGVSDQNIG 182
Query: 185 SLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLK 217
+L +AG D++V GS F N KG Y + + LK
Sbjct: 183 ALKEAGVDVVVAGSYVFKNPKG---YKEAIASLK 213
>gi|237835673|ref|XP_002367134.1| ribulose-phosphate 3-epimerase [Toxoplasma gondii ME49]
gi|211964798|gb|EEA99993.1| ribulose-phosphate 3-epimerase [Toxoplasma gondii ME49]
gi|221485331|gb|EEE23612.1| ribulose-phosphate 3-epimerase, putative [Toxoplasma gondii GT1]
gi|221506192|gb|EEE31827.1| ribulose-phosphate 3-epimerase, putative [Toxoplasma gondii VEG]
Length = 230
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 128/217 (58%), Gaps = 9/217 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PS+LA+D S L + + AG +H D+MDG FVPNISFG V+++LR + S F
Sbjct: 9 ICPSVLASDLSSLASDAKRMVDAGCDWLHLDIMDGHFVPNISFGPGVVKALRGHLKSAFF 68
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRS---LRTIHAMGKKTGVAINPET 121
D HLM+S + I ADAG + ITFH ES ++R+ + I A G K G+AI P T
Sbjct: 69 DVHLMVSEPEKWIQPFADAGANSITFHWESVGGDLQRAAELAKRIQARGIKAGLAIKPAT 128
Query: 122 PVAILEDVI--DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
L + + D DM+L+MTV PGFGGQ+ + + K+R A++L K ++++VDGG+
Sbjct: 129 KFEDLGEALAGDNFDMLLVMTVEPGFGGQKFMADMLQKVRTARSLFPK--LNIQVDGGLD 186
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+K AGA+++V G+S F + + + D+
Sbjct: 187 GETVKPAASAGANVIVAGTSMFKAENPAALMTFMRDV 223
>gi|226288340|gb|EEH43852.1| ribulose-phosphate 3-epimerase [Paracoccidioides brasiliensis Pb18]
Length = 251
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 129/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVI------ 54
M P I PSIL+ADF+ LG E S++ K+ + IH D+MDG FVPNI+FGA V+
Sbjct: 1 MAPPTIIAPSILSADFASLGSECSHLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRLH 60
Query: 55 --RSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
R R FDCH+MIS + DAGCD+ FH P R
Sbjct: 61 VERPSRRLGKGTFDCHMMISEPQKWVKDFKDAGCDLYCFHYEAAMTSTAAKVPADKSTTR 120
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
R+ +R IH + G+AI P+T V +L D++ D D++L+MTV PGFGGQ+
Sbjct: 121 RTSPTELIRYIHEQEMQAGIAIKPDTSVDVLWDILEQKDPMDRPDIVLVMTVYPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ + +++EVDGG+ + +AGA+++V GS+ F+ +
Sbjct: 181 FMASELPKVNALRTRYP--DLNIEVDGGLGEGTVDLAAEAGANVIVAGSAVFSAQDPAKV 238
Query: 210 AKRLND 215
L D
Sbjct: 239 IAMLRD 244
>gi|148230294|ref|NP_001087964.1| ribulose-5-phosphate-3-epimerase [Xenopus laevis]
gi|52078454|gb|AAH82474.1| LOC494647 protein [Xenopus laevis]
Length = 228
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL +D SRL E + ++GA +H DVMDG FVPNI+FG V+ LR
Sbjct: 1 MSSGCKIGPSILNSDLSRLAAECDRMLQSGADYLHLDVMDGHFVPNITFGHPVVECLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
S+ FD H+M++ + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGSNPFFDMHMMVAQPEQWVKPMATAGANQYTFHLEATNNTGALIKDIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ ++ S+ +EVDGGV
Sbjct: 121 PNTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
NI +AGA+++V GS+
Sbjct: 179 GPDNIHRCAEAGANMIVSGSA 199
>gi|315636788|ref|ZP_07892014.1| ribulose-phosphate 3-epimerase [Arcobacter butzleri JV22]
gi|315478914|gb|EFU69621.1| ribulose-phosphate 3-epimerase [Arcobacter butzleri JV22]
Length = 213
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF L EI I AG +H DVMDG FVPN++ G V+ + + D
Sbjct: 3 VAPSILSADFGNLANEIKAICDAGCDLVHVDVMDGHFVPNMTIGPVVVEPVAKVASKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A I+FH ES H R ++ I + G K + +NP + +
Sbjct: 63 IHLMVENNTFFVDLFAPCKPLYISFHIESEKHPHRLIQKIRSYGIKPAIVLNPHSRPQEI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E +++++DM+L+M+VNPGFGGQ+ I S + K ++ K LI KR+ + +EVDGGV +NI+
Sbjct: 123 EYLLEDLDMVLLMSVNPGFGGQKFIPSVVEKAKELKELINKRNPNCLIEVDGGVNDKNIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AG D++V GS F G Y K + LK
Sbjct: 183 ILKNAGVDIVVAGSYVF---GSDDYEKAIKSLK 212
>gi|255731446|ref|XP_002550647.1| ribulose-phosphate 3-epimerase [Candida tropicalis MYA-3404]
gi|240131656|gb|EER31215.1| ribulose-phosphate 3-epimerase [Candida tropicalis MYA-3404]
Length = 230
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 117/203 (57%), Gaps = 9/203 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS-- 63
I PSILAADF+ LG + G + +H DVMDG FVPNIS G +I SLR
Sbjct: 6 IAPSILAADFANLGCNCKKVVDTGDVEWLHLDVMDGHFVPNISLGPPIIESLRKQFPREG 65
Query: 64 ----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
VFDCH+M+S D I IA AG D TFH E++ R ++ I G K +AI P
Sbjct: 66 EKPIVFDCHMMVSEPDEWIEEIAKAGGDSYTFHFEATKDPARVIKKIKEHGLKAAMAIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TPV + +D++DM+L+MTV PGFGGQ+ + +PK+ + + + ++VDGG+
Sbjct: 126 RTPVEEVYPYVDDLDMVLVMTVEPGFGGQKFMPDMMPKVEKLREKY--PHLDVQVDGGLG 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
I+ AGA+++V G+S F
Sbjct: 184 KDTIQPAADAGANVIVAGTSVFK 206
>gi|187736141|ref|YP_001878253.1| Ribulose-phosphate 3-epimerase [Akkermansia muciniphila ATCC
BAA-835]
gi|187426193|gb|ACD05472.1| Ribulose-phosphate 3-epimerase [Akkermansia muciniphila ATCC
BAA-835]
Length = 217
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 118/201 (58%), Gaps = 6/201 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDSV 64
I PS+LAADFSR+GEE AGA +H D+MDG FV NISFG ++ ++R D
Sbjct: 4 ISPSLLAADFSRIGEEARRAFDAGADWLHLDIMDGHFVDNISFGPEICAAVRKAVGPDRF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D + + AG ++I FH E S +IR +L I G K G+A+NP TP
Sbjct: 64 LDAHLMIERPDHYFDRFVRAGVNLICFHVELGDSYYIRNTLGRIREAGVKNGLALNPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+E + EID++L+M+V PGFGGQ + S + K+ +A + S +++DGG+
Sbjct: 124 FEAVEPYLAEIDLLLVMSVVPGFGGQSFMPSVLDKVEKAAEWRTENRASFLIQMDGGIGQ 183
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
N AGAD+LV GSS F
Sbjct: 184 NNAAQCALAGADVLVAGSSTF 204
>gi|288918236|ref|ZP_06412591.1| ribulose-phosphate 3-epimerase [Frankia sp. EUN1f]
gi|288350406|gb|EFC84628.1| ribulose-phosphate 3-epimerase [Frankia sp. EUN1f]
Length = 241
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 3/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PS+LAADF R+ + + A +H DVMD FVPN++F D + +LR +D+
Sbjct: 9 TAQIYPSMLAADFGRIADAARAVA-GHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDT 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E+ I R+ I A G +TG+A+ P TPV
Sbjct: 68 PLDCHLMIDDPDRWAPGFAERGAANVTIHAEAVDDIARTTDAIRAAGARTGLAVKPATPV 127
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D++L+MT+ PGFGGQ+ ++ +PKI A+ LI R + L++DGGV
Sbjct: 128 EHYLDDLHRFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDDRGLDLWLQIDGGVNRE 187
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ +AG D+ V G++ F
Sbjct: 188 TIERSAEAGVDVFVAGTAVFG 208
>gi|326484032|gb|EGE08042.1| ribulose-phosphate 3-epimerase [Trichophyton equinum CBS 127.97]
Length = 252
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 130/248 (52%), Gaps = 37/248 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE------------------ 94
FDCH+MI+ + DAGCD+ FH E
Sbjct: 61 VQRPTCAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVKSTAAKEPSDNTTTE 120
Query: 95 -SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFGG 147
+SP + +R IH +G + G+AI PET V +L D+ I+ DM+L+MTVNPGFGG
Sbjct: 121 KTSP--KELIRYIHELGMQAGIAIKPETSVDVLWDILENKEAIERPDMVLVMTVNPGFGG 178
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
Q+ + S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 179 QKFMASELPKVQALRAKY--PDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAQNPA 236
Query: 208 SYAKRLND 215
+L +
Sbjct: 237 EVIAKLRE 244
>gi|189204051|ref|XP_001938361.1| ribulose-phosphate 3-epimerase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985460|gb|EDU50948.1| ribulose-phosphate 3-epimerase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 252
Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 131/246 (53%), Gaps = 34/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG+ S+ GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFGALGKACSDTISQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPES--------SPHIRRS-- 102
D FDCH+MI+ + AGCD+ FH E+ SP +
Sbjct: 61 VDRPTTAHGKGTFDCHMMIAEPKRWVRDFKKAGCDLYCFHYEAAVSSTAADSPSAKSDKQ 120
Query: 103 ------LRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQL 150
+R IHA G + G+AI P T V +L D+++ DM+L+MTV PGFGGQ
Sbjct: 121 TSPQDLIRFIHAEGMQAGIAIKPSTSVDVLWDILENPNKEEVPDMVLVMTVEPGFGGQSF 180
Query: 151 IESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ AL K + +EVDGG+ + I AGA+++V GS+ F
Sbjct: 181 MASELPKV---TALRQKYPELHIEVDGGLGEKTIDQAADAGANVIVAGSAVFGASDPGHV 237
Query: 210 AKRLND 215
K+L +
Sbjct: 238 IKKLRE 243
>gi|317057581|ref|YP_004106048.1| ribulose-phosphate 3-epimerase [Ruminococcus albus 7]
gi|315449850|gb|ADU23414.1| ribulose-phosphate 3-epimerase [Ruminococcus albus 7]
Length = 215
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 126/208 (60%), Gaps = 3/208 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+L D + L EI +I KAGA +H DVMDG FV NISFG V++ ++ + D HL
Sbjct: 8 SLLGCDLADLKNEIESIEKAGADWLHCDVMDGVFVNNISFGTPVLKCVKKAAGIPLDTHL 67
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
MI+ +I+ A+ G D+ITFH E++ + + IHA GK G++I P TPV+ ++
Sbjct: 68 MITDPIRYIDDYAELGSDMITFHLEAASDPQAVIDKIHAHGKSAGISIKPGTPVSAVKPY 127
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNIKSL 186
++ +DM+L+MTV PGFGGQ+ T+ KI + + L+ G+ + +EVDGG+ + +K
Sbjct: 128 LESVDMVLVMTVEPGFGGQKFNPDTLEKISEIRYLLDSMGRPQVDIEVDGGINGQTVKLC 187
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLN 214
+AGA++ V G+ F + + K L
Sbjct: 188 REAGANVFVSGTYIFGVEDRKAAVKSLK 215
>gi|163841090|ref|YP_001625495.1| ribulose-phosphate 3-epimerase [Renibacterium salmoninarum ATCC
33209]
gi|162954566|gb|ABY24081.1| ribulose-phosphate 3-epimerase [Renibacterium salmoninarum ATCC
33209]
Length = 224
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L E++ I+ A A +H DVMD FVPN++ G ++ ++ S D
Sbjct: 4 IHPSILSADFVNLESELARISNAEA--VHVDVMDNHFVPNLTLGLPIVNRIQQVSPIPLD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS +D AD G +TFH E+S R R + G + G+A+ P TPV
Sbjct: 62 VHLMISDVDRWAPEYADIGAASVTFHVEASAAPIRLARELRQRGARAGMALRPATPVEPY 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
D++ E+DM+L+MTV PGFGGQ ++ +PKIR+A+A I +ISL++DGG++ I+
Sbjct: 122 LDMLAELDMLLLMTVEPGFGGQAFLDVVLPKIRRARAAIDGSGAAISLQLDGGISIDTIE 181
Query: 185 SLVQAGADLLVVGSSFFN 202
+AGA++ V GS+ +N
Sbjct: 182 RAAEAGANVFVAGSAVYN 199
>gi|120403673|ref|YP_953502.1| ribulose-phosphate 3-epimerase [Mycobacterium vanbaalenii PYR-1]
gi|119956491|gb|ABM13496.1| ribulose-5-phosphate 3-epimerase [Mycobacterium vanbaalenii PYR-1]
Length = 234
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 128/216 (59%), Gaps = 7/216 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL EE + + GA +H DVMD FVPN++ G V+ SL +D D
Sbjct: 15 IAPSILAADFARLAEETAAVE--GADWLHVDVMDNHFVPNLTLGLPVVESLLKATDIPMD 72
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + + A+AG +T H E++ + R I A G K G+++ P TP+
Sbjct: 73 CHLMIENPERWAPPYAEAGAYNVTIHAEATDNPVAVARDIRAAGAKAGLSVKPGTPLEPY 132
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
++ E D +L+M+V PGFGGQ+ I +PK+ A+ L+ G+ +I +E+DGG+ + I+
Sbjct: 133 LQILREFDTLLVMSVEPGFGGQKFIAEVLPKVGIARRLVDAGELTIVIEIDGGINADTIE 192
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG D V GS+ ++ + A ++ L+K A
Sbjct: 193 AAAEAGVDCFVAGSAVYSAQDP---AAAVHSLRKQA 225
>gi|15608546|ref|NP_215924.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Rv]
gi|31792602|ref|NP_855095.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis AF2122/97]
gi|121637338|ref|YP_977561.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148661199|ref|YP_001282722.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Ra]
gi|148822628|ref|YP_001287382.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis F11]
gi|224989813|ref|YP_002644500.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799542|ref|YP_003032543.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
1435]
gi|254550422|ref|ZP_05140869.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186347|ref|ZP_05763821.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis CPHL_A]
gi|260200463|ref|ZP_05767954.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T46]
gi|289442853|ref|ZP_06432597.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T46]
gi|289447004|ref|ZP_06436748.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
CPHL_A]
gi|289554801|ref|ZP_06444011.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
605]
gi|289569425|ref|ZP_06449652.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T17]
gi|289574077|ref|ZP_06454304.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis K85]
gi|289745159|ref|ZP_06504537.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis 02_1987]
gi|289749966|ref|ZP_06509344.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T92]
gi|289757514|ref|ZP_06516892.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T85]
gi|289761567|ref|ZP_06520945.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis GM
1503]
gi|298524914|ref|ZP_07012323.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
94_M4241A]
gi|1542916|emb|CAB02187.1| PROBABLE RIBULOSE-PHOSPHATE 3-EPIMERASE RPE (PPE) (R5P3E)
(Pentose-5-phosphate 3-epimerase) [Mycobacterium
tuberculosis H37Rv]
gi|31618191|emb|CAD94304.1| PROBABLE RIBULOSE-PHOSPHATE 3-EPIMERASE RPE (PPE) (R5P3E)
(Pentose-5-phosphate 3-epimerase) [Mycobacterium bovis
AF2122/97]
gi|121492985|emb|CAL71456.1| Probable ribulose-phosphate 3-epimerase rpe [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148505351|gb|ABQ73160.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Ra]
gi|148721155|gb|ABR05780.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis F11]
gi|224772926|dbj|BAH25732.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321045|gb|ACT25648.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
1435]
gi|289415772|gb|EFD13012.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T46]
gi|289419962|gb|EFD17163.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
CPHL_A]
gi|289439433|gb|EFD21926.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
605]
gi|289538508|gb|EFD43086.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis K85]
gi|289543179|gb|EFD46827.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T17]
gi|289685687|gb|EFD53175.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis 02_1987]
gi|289690553|gb|EFD57982.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T92]
gi|289709073|gb|EFD73089.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis GM
1503]
gi|289713078|gb|EFD77090.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T85]
gi|298494708|gb|EFI30002.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
94_M4241A]
gi|326903029|gb|EGE49962.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
W-148]
gi|328459290|gb|AEB04713.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
4207]
Length = 232
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 13 IAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
D++ D +L+M+V PGFGGQ+ I + K+R + ++ G+ +I +E+DGG+ I+
Sbjct: 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
Query: 185 SLVQAGADLLVVGSSFFN 202
+AG D V GS+ +
Sbjct: 191 QAAEAGVDCFVAGSAVYG 208
>gi|256090553|ref|XP_002581251.1| ribulose-phosphate 3-epimerase [Schistosoma mansoni]
gi|238667109|emb|CAZ37490.1| ribulose-phosphate 3-epimerase [Schistosoma mansoni]
Length = 231
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 123/202 (60%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SD 62
I I PSIL AD S+L + ++ +GA +H DVMDG FVPNI+ G V+ SL+ + S
Sbjct: 9 ILIGPSILNADLSKLADVCDHLLNSGADYLHLDVMDGHFVPNITIGHPVVASLKKHLPSK 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D H+M+S + + + AG TFH ES+ ++ + I K G+ I P+TP
Sbjct: 69 AFLDLHMMVSDPEKWVENMKAAGASQYTFHLESTENVMHCIHKIREADMKVGLGIKPKTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V L ID +DMILIMTV PGFGGQ+ + +PK++ + G ++ +EVDGGVT +N
Sbjct: 129 VTELLPYIDSVDMILIMTVEPGFGGQKFMADMLPKVKYLRERYG--NLDIEVDGGVTLKN 186
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
++ V+AGA+++V G+ + +
Sbjct: 187 VRDCVEAGANMIVSGTEITSHE 208
>gi|225683185|gb|EEH21469.1| ribulose-phosphate 3-epimerase [Paracoccidioides brasiliensis Pb03]
Length = 249
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 131/246 (53%), Gaps = 35/246 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVI------ 54
M P I PSIL+ADF+ LG E S++ K+ + IH D+MDG FVPNI+FGA V+
Sbjct: 1 MAPPTIIAPSILSADFASLGSECSHLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRLH 60
Query: 55 --RSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
R R FDCH+MIS + + DAGCD+ FH P R
Sbjct: 61 VERPSRRLGKGTFDCHMMIS--EKWVKDFKDAGCDLYCFHYEAAVTSTAAKVPADKSTTR 118
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
R+ +R IH G + G+AI P+T V +L D++ D D++L+MTV PGFGGQ+
Sbjct: 119 RTSPTELIRYIHEQGMQAGIAIKPDTSVDVLWDILEQKDPMDRPDIVLVMTVYPGFGGQK 178
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ + +++EVDGG+ + +AGA+++V GS+ F+ +
Sbjct: 179 FMASELPKVNALRTRYP--DLNIEVDGGLGEGTVDLAAEAGANVIVAGSAVFSAQDPAKV 236
Query: 210 AKRLND 215
L D
Sbjct: 237 IAMLRD 242
>gi|116490837|ref|YP_810381.1| ribulose-5-phosphate 3-epimerase [Oenococcus oeni PSU-1]
gi|118587052|ref|ZP_01544482.1| ribulose-phosphate 3-epimerase [Oenococcus oeni ATCC BAA-1163]
gi|290890282|ref|ZP_06553361.1| hypothetical protein AWRIB429_0751 [Oenococcus oeni AWRIB429]
gi|116091562|gb|ABJ56716.1| ribulose-5-phosphate 3-epimerase [Oenococcus oeni PSU-1]
gi|118432462|gb|EAV39198.1| ribulose-phosphate 3-epimerase [Oenococcus oeni ATCC BAA-1163]
gi|290480068|gb|EFD88713.1| hypothetical protein AWRIB429_0751 [Oenococcus oeni AWRIB429]
Length = 223
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
S+ + PSILAAD+ LGE+I + AGAK +H D+MDG FVP+IS+G ++ ++ S S
Sbjct: 2 SVIVAPSILAADYLNLGEQIKLVEGAGAKYLHIDIMDGDFVPSISYGPQWVKQIKASGSK 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLM++ + I+ AG DII H E++ HI R+L+ I G V INP TP
Sbjct: 62 LVLDVHLMVNHPEKLIDSFVSAGADIIGVHVEATAHIHRALQMIKNAGVHPEVVINPGTP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
V+ + ++ +D +L+MTVNPGFGGQ+ + I KI + + + +E+DGGV +
Sbjct: 122 VSAILPILYMVDQVLVMTVNPGFGGQKFLPEEISKISELHEYKKEHGLDFDIEIDGGVNN 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + +AGA + V GS +++ + K+L
Sbjct: 182 QTLVKAYEAGATVAVAGSYVYDKVDPAAKVKKL 214
>gi|15840866|ref|NP_335903.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis CDC1551]
gi|167968447|ref|ZP_02550724.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Ra]
gi|215403255|ref|ZP_03415436.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis 02_1987]
gi|215411053|ref|ZP_03419861.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis
94_M4241A]
gi|215426745|ref|ZP_03424664.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T92]
gi|215445595|ref|ZP_03432347.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T85]
gi|218753117|ref|ZP_03531913.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis GM 1503]
gi|219557311|ref|ZP_03536387.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T17]
gi|254231650|ref|ZP_04924977.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis C]
gi|254364291|ref|ZP_04980337.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis str.
Haarlem]
gi|260204673|ref|ZP_05772164.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis K85]
gi|294994970|ref|ZP_06800661.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis 210]
gi|297633964|ref|ZP_06951744.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis KZN
4207]
gi|297730953|ref|ZP_06960071.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis KZN
R506]
gi|306780739|ref|ZP_07419076.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu002]
gi|306784138|ref|ZP_07422460.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu003]
gi|306788508|ref|ZP_07426830.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu004]
gi|306792831|ref|ZP_07431133.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu005]
gi|306797230|ref|ZP_07435532.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu006]
gi|306807308|ref|ZP_07443976.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu007]
gi|306971699|ref|ZP_07484360.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu010]
gi|307083977|ref|ZP_07493090.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis SUMu012]
gi|308231833|ref|ZP_07663945.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu001]
gi|308376712|ref|ZP_07668329.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu008]
gi|308380067|ref|ZP_07669112.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu011]
gi|313658286|ref|ZP_07815166.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis KZN
V2475]
gi|54039256|sp|P65761|RPE_MYCBO RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|54041952|sp|P65760|RPE_MYCTU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|13881066|gb|AAK45717.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis CDC1551]
gi|124600709|gb|EAY59719.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis C]
gi|134149805|gb|EBA41850.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis str.
Haarlem]
gi|308215902|gb|EFO75301.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu001]
gi|308326398|gb|EFP15249.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu002]
gi|308331084|gb|EFP19935.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu003]
gi|308334897|gb|EFP23748.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu004]
gi|308338706|gb|EFP27557.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu005]
gi|308342393|gb|EFP31244.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu006]
gi|308346231|gb|EFP35082.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu007]
gi|308350183|gb|EFP39034.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu008]
gi|308358775|gb|EFP47626.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu010]
gi|308362712|gb|EFP51563.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu011]
gi|308366379|gb|EFP55230.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis SUMu012]
Length = 229
Score = 158 bits (399), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 10 IAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 68 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
D++ D +L+M+V PGFGGQ+ I + K+R + ++ G+ +I +E+DGG+ I+
Sbjct: 128 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 187
Query: 185 SLVQAGADLLVVGSSFFN 202
+AG D V GS+ +
Sbjct: 188 QAAEAGVDCFVAGSAVYG 205
>gi|215430295|ref|ZP_03428214.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis EAS054]
gi|289753490|ref|ZP_06512868.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
EAS054]
gi|289694077|gb|EFD61506.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
EAS054]
Length = 233
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 14 IAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 72 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
D++ D +L+M+V PGFGGQ+ I + K+R + ++ G+ +I +E+DGG+ I+
Sbjct: 132 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 191
Query: 185 SLVQAGADLLVVGSSFFN 202
+AG D V GS+ +
Sbjct: 192 QAAEAGVDCFVAGSAVYG 209
>gi|56685888|dbj|BAD79110.1| ribulose-phosphate 3-epimerase [Synechococcus elongatus PCC 6301]
Length = 189
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 5/184 (2%)
Query: 38 VMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
+MDG FVPNI+ G ++ +LR + D HLMI + ++ A AG DII+ E+ P
Sbjct: 1 MMDGRFVPNITIGPLIVEALRPVTQKPLDVHLMIVEPEKYVPDFAKAGADIISVQAEACP 60
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
H+ R+L I +GK+ GV +NP TPV LE V++ D+ILIM+VNPGFGGQ I + +PK
Sbjct: 61 HLHRNLAQIKDLGKQAGVVLNPSTPVETLEYVLELCDLILIMSVNPGFGGQSFIPAVLPK 120
Query: 158 IRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IR+ +A+ +R + +EVDGG+ + N +++AGA+ +V GS+ FN YA+ +
Sbjct: 121 IRKLRAMCDERGLDPWIEVDGGLKANNTWQVLEAGANAIVAGSAVFNAP---DYAEAIAA 177
Query: 216 LKKS 219
++ S
Sbjct: 178 IRNS 181
>gi|323450909|gb|EGB06788.1| hypothetical protein AURANDRAFT_28711 [Aureococcus anophagefferens]
Length = 234
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 122/208 (58%), Gaps = 12/208 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PS+L ADF+ LG + + + +AG +I FDVMDG FVPN++FG DVI + R + +F
Sbjct: 4 QIIPSVLPADFAALGIDCTKLEEAGCDRIQFDVMDGNFVPNLTFGPDVIAAQRKTTKLMF 63
Query: 66 DCHLMISSIDSHINIIADAGCD--------IITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ LM+S + + C ++ H E+ H+ R+L I AMG VA+
Sbjct: 64 ETQLMVSERCTDAMLPQFTECTKGPNGEPGVVIVHAEACTHLHRALSNIRAMGGSPSVAL 123
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVD 175
NP TP +++V+D +D +L+MTVNPGFGGQ I + KIR+ + I R + +EVD
Sbjct: 124 NPSTPAEAIDNVLDLVDHVLVMTVNPGFGGQAYIPTMTDKIRKIRKWIVDRELDVDIEVD 183
Query: 176 GGV--TSRNIKSLVQAGADLLVVGSSFF 201
GG+ + I + QAGA+ + GS F
Sbjct: 184 GGIKASPETIGACAQAGANCFIAGSGLF 211
>gi|254822404|ref|ZP_05227405.1| ribulose-phosphate 3-epimerase [Mycobacterium intracellulare ATCC
13950]
Length = 247
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRL +E + +T GA +H DVMD FVPN++ G V+ SL + + D
Sbjct: 28 IAPSILSADFSRLADEAAAVT--GADWLHVDVMDNHFVPNLTLGLPVVESLLAATTIPMD 85
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 86 CHLMIEDPDRWAPPYAEAGAYNVTFHAEATQNPIAVARDIRAAGAKAGISVKPGTPLEPY 145
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ + D +LIM+V PGFGGQ I + K+R A+ LI G+ +I +E+DGG+ I+
Sbjct: 146 LEILPQFDTLLIMSVEPGFGGQSFIPEVLSKVRTARKLIDAGELTILVEIDGGINGDTIE 205
Query: 185 SLVQAGADLLVVGSSFF 201
+AG D V GS+ +
Sbjct: 206 QAAEAGVDCFVAGSAVY 222
>gi|305433006|ref|ZP_07402162.1| ribulose-phosphate 3-epimerase [Campylobacter coli JV20]
gi|304443707|gb|EFM36364.1| ribulose-phosphate 3-epimerase [Campylobacter coli JV20]
Length = 215
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 127/215 (59%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EEI I +AGA +H DVMDG FVPN++FG VI + + ++
Sbjct: 1 MYVAPSLLSANFLKLEEEIKAIDEAGADLLHIDVMDGHFVPNLTFGPCVIEKISTITEIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ I+FH ES H R I + G + +NP TP+
Sbjct: 61 LDVHLMVKDVGKFVDLFIPIKPKFISFHIESEAHPIRLCEYIRSQGIHPAIVLNPHTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +ID +DM+L+M+VNPGFGGQ+ + KI++ + LI +++ + +EVDGGV N
Sbjct: 121 SIKHMIDFVDMVLLMSVNPGFGGQKFLPLVYDKIKELRRLIDEKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AGAD+LV GS F+ Y ++ LK
Sbjct: 181 ASDLEAAGADILVAGSYIFSSN---DYKTSISSLK 212
>gi|50309245|ref|XP_454629.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643764|emb|CAG99716.1| KLLA0E15071p [Kluyveromyces lactis]
Length = 237
Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 124/206 (60%), Gaps = 13/206 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS----YSD 62
I PSILA+DF++LG E N+ +GA +H D+MDG FVPN+S G V+ SLR Y+D
Sbjct: 6 IAPSILASDFTKLGCECHNVINSGADWLHIDIMDGHFVPNMSLGQPVVESLRKVIGKYND 65
Query: 63 -------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+ FDCH+M+S + + A GCD TFH E++ ++ I G K
Sbjct: 66 PDTKLPRAFFDCHMMVSEPERWVEDFARIGCDQFTFHYEATKDPVALVKLIKKHGMKAAC 125
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
++ P TPV +L ++ +DM L+MTV PGFGGQ+ + + K++ + +++++VD
Sbjct: 126 SVKPGTPVDVLYELAPSLDMALVMTVEPGFGGQKFMADMMSKVKDLRTRF--PNLNIQVD 183
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFF 201
GG+ +N++ +AGA+++V G+S F
Sbjct: 184 GGLGKQNVELAAEAGANVIVAGTSVF 209
>gi|242003727|ref|XP_002422838.1| Ribulose-phosphate 3-epimerase, putative [Pediculus humanus
corporis]
gi|212505708|gb|EEB10100.1| Ribulose-phosphate 3-epimerase, putative [Pediculus humanus
corporis]
Length = 234
Score = 157 bits (398), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 125/207 (60%), Gaps = 11/207 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SD 62
+ QI PS+L AD S+L EE + GA +H DVMDG FVPNI+FG VI+ LR+ +
Sbjct: 13 TTQIGPSVLCADLSQLYEESEKLLSCGADYLHLDVMDGHFVPNITFGHPVIKCLRNKIKN 72
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ F+ H+M+S+ I ADAG + TFH P + I R I G K G+A+ P
Sbjct: 73 AFFESHMMVSNPLQWIEPTADAGVNQYTFHVEPCNKNEIEDICRKIRECGMKVGLALKPG 132
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGG 177
TP++++++ ID D++LIMTV PGFGGQ+ + + + K+ RQA +++EVDGG
Sbjct: 133 TPISVIQNYIDYADLVLIMTVEPGFGGQKFMSNMMEKVKLLRQANP-----GLNIEVDGG 187
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK 204
V I+ +AGA+ +V G++ N K
Sbjct: 188 VGPNTIEQCAKAGANWIVSGTAVTNSK 214
>gi|302498644|ref|XP_003011319.1| hypothetical protein ARB_02377 [Arthroderma benhamiae CBS 112371]
gi|291174869|gb|EFE30679.1| hypothetical protein ARB_02377 [Arthroderma benhamiae CBS 112371]
Length = 611
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 130/248 (52%), Gaps = 37/248 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 360 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 419
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE------------------ 94
FDCH+MI+ + DAGCD+ FH E
Sbjct: 420 VQRPACAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVKSNAAKEPSDNTTTE 479
Query: 95 -SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFGG 147
+SP + +R IH +G + G+AI PET V +L D+ I+ DM+L+MTVNPGFGG
Sbjct: 480 KTSP--KELIRYIHELGMQAGIAIKPETSVDVLWDILENKEAIERPDMVLVMTVNPGFGG 537
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
Q+ + S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 538 QKFMASELPKVQALRA--KYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAQNPA 595
Query: 208 SYAKRLND 215
+L +
Sbjct: 596 EVIAKLRE 603
>gi|297180743|gb|ADI16951.1| pentose-5-phosphate-3-epimerase [uncultured SAR406 cluster
bacterium HF0010_18O13]
Length = 227
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 13/212 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L ADFS L +E+ + A+ +H D+MD FVPN+SFG +++SLR +S+ FD
Sbjct: 9 IAPSVLGADFSNLQKEVKFCNDSKAEWLHLDIMDQQFVPNLSFGPGLVKSLRPHSELFFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESS-------PHIRRSLRTIHAMGKKTGVAINP 119
HLM+S+ ++ DAG D I+FH E++ P I + I K G+AI P
Sbjct: 69 VHLMVSNPFDMLSPFIDAGADGISFHIEATESRFTFPPKIL--INMIKKNDLKCGIAIKP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ-AKALIGKR---SISLEVD 175
+TP +IL+ I+ ID I++M+V+PGFGGQ I STI KI + + LI + I ++VD
Sbjct: 127 KTPFSILKKYIEFIDYIVVMSVDPGFGGQSFIPSTIQKISEINEYLIDMKIRDKIMIQVD 186
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
GG+ N K +++AG D+LV GS F + I
Sbjct: 187 GGIKLENYKDVIEAGGDILVAGSQVFKSENPI 218
>gi|150015118|ref|YP_001307372.1| ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
gi|149901583|gb|ABR32416.1| Ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
Length = 223
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 125/200 (62%), Gaps = 2/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+ ++ + + IH D+MDG +VPNIS G D + SLR +D+ FD
Sbjct: 5 ISPSLLSANVCNYSDDFKVFNEKNIQVIHIDIMDGHYVPNISIGLDQVASLRKLTDAEFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+++ D + + +AG + IT H E + H+ +S+ + + G K GVA+NP TP++ L
Sbjct: 65 VHLMVTNPDEFVEALVEAGANSITIHSEVATHLYKSIHYLKSFGIKAGVALNPATPISCL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E V +D +L+M+V PGFGGQ I ++ KIR+ + + + +++VDGG+ NI+
Sbjct: 125 EHVYSLLDRVLVMSVEPGFGGQTFIPFSLEKIRKLNDIKSENNYGFTVQVDGGINLDNIE 184
Query: 185 SLVQAGADLLVVGSSFFNQK 204
++++GA +V+GSS F +
Sbjct: 185 DVIKSGARDIVIGSSLFREN 204
>gi|154149308|ref|YP_001406343.1| ribulose-phosphate 3-epimerase [Campylobacter hominis ATCC BAA-381]
gi|153805317|gb|ABS52324.1| ribulose-phosphate 3-epimerase [Campylobacter hominis ATCC BAA-381]
Length = 213
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L +EI+ + +AGA IH DVMDG FVPN++ G V++S+ +
Sbjct: 1 MYVAPSILSADFGKLNDEITAVCEAGADLIHVDVMDGHFVPNLTIGPVVVKSVAKIATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ N+ ++FH ES H R + I G G+ +NP T ++
Sbjct: 61 LDIHLMVDDNTFFTNLFIPLKPKFLSFHIESENHPLRLIDHIRKNGISPGIVLNPHTEIS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +I E+D++L+M+VNPGFGGQ+ I S I K R+ + LI K +EVDGGV N
Sbjct: 121 TLKYIIKEVDLVLLMSVNPGFGGQKFIPSIIEKSRELRELIYKTDAKCLIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L +AG D++V G+ F+ + SY + LK
Sbjct: 181 VAELDEAGVDIVVAGNYVFSSQ---SYKAAITSLK 212
>gi|225710652|gb|ACO11172.1| Ribulose-phosphate 3-epimerase [Caligus rogercresseyi]
gi|225711048|gb|ACO11370.1| Ribulose-phosphate 3-epimerase [Caligus rogercresseyi]
Length = 230
Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+I PSIL D +L E ++ GA +H DVMDG FVPN++FGA V++ LRS ++
Sbjct: 9 RIGPSILNTDLCQLANESQSLLDHGADYLHLDVMDGHFVPNLTFGAPVVKCLRSKVKKAM 68
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ + + ++DAG D TFH E++ R I G K G+ I P+TPV+
Sbjct: 69 FDMHMMVQHPEKWVKDMSDAGADQYTFHIEATEDPLALCRRIRESGMKVGIGIKPKTPVS 128
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E ID DMIL+MTV PGFGGQ+ +E + K+ + ++ +EVDGGV + NI+
Sbjct: 129 AVEQYIDSADMILVMTVEPGFGGQKFMEDMMEKVSYLRE--HHPNLDIEVDGGVGTGNIR 186
Query: 185 SLVQAGADLLVVGSS 199
+AGA+++V G++
Sbjct: 187 QCAKAGANMIVSGTA 201
>gi|307205237|gb|EFN83617.1| Ribulose-phosphate 3-epimerase [Harpegnathos saltator]
Length = 223
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+I PSIL AD ++L EE + GA +H DVMDG FVPN++FG +++ LR+ D+
Sbjct: 7 KIGPSILNADLAQLYEESQKLLDNGADYLHLDVMDGHFVPNLTFGHPIVKCLRNKIKDAF 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+S + I +ADAG + TFH E + R I G K GVA+ P TPV
Sbjct: 67 FETHMMVSDPEKWIVPMADAGVNQYTFHVEPVKDVFLVCRKIKEAGMKVGVALKPGTPVD 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++ D ++ DMIL+MTV PGFGGQ+ IES + K+ + + +EVDGGV I+
Sbjct: 127 VVCDYVNLADMILVMTVEPGFGGQKFIESMLQKVSWLRK--NYPLLDIEVDGGVGLTTIE 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
S +AGA+++V G++ G AK + LK +
Sbjct: 185 SCAKAGANMIVSGTAII---GSTDQAKVITTLKNT 216
>gi|224417707|ref|ZP_03655713.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
gi|253827055|ref|ZP_04869940.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
gi|313141249|ref|ZP_07803442.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
gi|253510461|gb|EES89120.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
gi|313130280|gb|EFR47897.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
Length = 211
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 127/213 (59%), Gaps = 6/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF +L EEI I +AG IH DVMDG FVPN++ G ++ S+ + D
Sbjct: 3 VAPSILSADFGKLNEEIKAICEAGCDLIHIDVMDGHFVPNLTMGPMIVSSVAKIATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A ++FH E H R ++ I G + +NP T + +
Sbjct: 63 IHLMVQNNSFFVDLFAPLKPKYLSFHIEEEKHANRLVQKIRDYGISPAIVLNPHTTLESI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+ +++ +DM+L+M+VNPGFGGQ+ I + + KI+ K I R+ +EVDGGV+ +NI
Sbjct: 123 DYLLEYVDMVLLMSVNPGFGGQKFIPNILEKIKYLKDKIELRNPRCLIEVDGGVSDKNIM 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L ++G D++V GS FN +Y +R+N LK
Sbjct: 183 ELKESGVDIVVAGSYVFNG----NYKERINSLK 211
>gi|320586831|gb|EFW99494.1| ribulose-phosphate 3-epimerase [Grosmannia clavigera kw1407]
Length = 251
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 126/233 (54%), Gaps = 33/233 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S + GA +H D+MDG FVPN++FG V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFANLGHECSKTIEQGADWLHVDIMDGHFVPNLTFGPPVVAKIRSH 60
Query: 61 ----------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-------SPHIRRS- 102
FDCH+MI+ + DAG D+ FH E+ +P +
Sbjct: 61 VAAPGTDAPLGRGTFDCHMMIAEPKRWVREFRDAGADLYCFHYEAAFSTAAETPSAQSDA 120
Query: 103 -------LRTIHAMGKKTGVAINPETPVAIL------EDVIDEIDMILIMTVNPGFGGQQ 149
+R IH++G + GVAI P TPV +L D D DM+L+MTV PGFGGQ+
Sbjct: 121 STTPAELVRYIHSLGLRAGVAIKPGTPVDVLFPLVDVADAADRPDMLLVMTVEPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+ +PK+R + +++EVDGG+ I +AGA+++V GS+ F
Sbjct: 181 FMADQMPKVRTLRDRY--PDLNIEVDGGLGPATIDVAAEAGANVIVAGSAVFG 231
>gi|269963474|ref|ZP_06177800.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831771|gb|EEZ85904.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 222
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 129/214 (60%), Gaps = 4/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS++ DFS+L E+ + KA +H DVMDG FVPN + G + I+++R+ +D +
Sbjct: 3 KFCPSMMCVDFSKLASELKELEKANVDMLHIDVMDGHFVPNFALGPEDIKAIRNLTDIEY 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S D I++ A G ++ H E+ PH+ RSL I A G K+G+AINP TP++
Sbjct: 63 DVHLMLSDPDQFIDLFAALGPKLMYIHAEAPPHLHRSLGNIQAKGIKSGLAINPGTPLSA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+EDV+D D+IL+M+VNPGF GQ I + +I + +I + S + +DG ++ I
Sbjct: 123 IEDVLDVTDVILVMSVNPGFAGQAFIPNAYNRIERIIEMIEAKGTSTKIAIDGAISPEVI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L + ++G++ K + SYA + DL+
Sbjct: 183 ERLSDK-VEYFILGTAGLFGKPK-SYADTMQDLR 214
>gi|257066173|ref|YP_003152429.1| ribulose-phosphate 3-epimerase [Anaerococcus prevotii DSM 20548]
gi|256798053|gb|ACV28708.1| ribulose-phosphate 3-epimerase [Anaerococcus prevotii DSM 20548]
Length = 225
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 130/222 (58%), Gaps = 7/222 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ DFSRL E + + K +H DVMDG FVPNISFG VI +R+ +D
Sbjct: 2 VELAPSILSCDFSRLQENLDDTKDTRLKMLHIDVMDGIFVPNISFGFKVIEDIRNRNDYF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET-PV 123
FD HLMI + +I AG D ITFH E++ + R + I + G + G+ + P T P
Sbjct: 62 FDTHLMIERPERYIERFVKAGSDRITFHIEATDNPREVISLIKSFGIEAGITLKPATDPK 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
IL ++ ++D +L+M+V PGFGGQ +E ++ K++ + I K + +E+DGG+ +
Sbjct: 122 EILP-LLKDLDCVLVMSVEPGFGGQSFMEDSLDKVQIFREYIDKNKLDTKIEIDGGIKTT 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSA 220
N+ ++ AG D +V GS F + K +I ++ D KS
Sbjct: 181 NVSRVIGAGCDEIVSGSDIFGKDDIKKQIEEYYKIFDQAKST 222
>gi|78779158|ref|YP_397270.1| ribulose-5-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9312]
gi|78712657|gb|ABB49834.1| ribulose-5-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9312]
Length = 252
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 136/227 (59%), Gaps = 14/227 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y +
Sbjct: 16 IQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCNVP 75
Query: 65 FDCHLMISS------IDSHINIIADAGCD--IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S ++S++N A + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEV 174
+NP TP ++E+++D +D +L+MTVNPGFGGQ I + + KIR+ + + +++ + +EV
Sbjct: 136 LNPHTPFEMIENIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIRKIRNFVIEKNLDVDIEV 195
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
DGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 196 DGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|167999253|ref|XP_001752332.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696727|gb|EDQ83065.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 124/207 (59%), Gaps = 8/207 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P +I PS+L++DFS L E I + GA +H DVMDG FVPN++ GA VI+SLR ++
Sbjct: 10 PRAKIAPSMLSSDFSNLASEAKFIEECGADWLHMDVMDGHFVPNLTIGAPVIKSLRKHTK 69
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPET 121
DCHLM+++ +++ AG TFH E + + + + I A G + GVA+ P T
Sbjct: 70 MYMDCHLMVTNPMDYVDEFVKAGASGFTFHVEVAKDNWQELIHKIKAGGMRAGVALRPGT 129
Query: 122 PVAILEDVIDE---IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS-ISLEVDGG 177
PV + +++ +DM+L+MTV PGFGGQ + T+PK+ AL K + +EVDGG
Sbjct: 130 PVEEVFPLVESQEPVDMVLVMTVEPGFGGQSFMPETMPKVN---ALRRKFPLLDIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ IK +AGA+ +V GS+ F K
Sbjct: 187 LAPATIKQAAEAGANCIVAGSAVFGAK 213
>gi|241042414|ref|XP_002407056.1| D-ribulose-5-phosphate 3-epimerase, putative [Ixodes scapularis]
gi|215492090|gb|EEC01731.1| D-ribulose-5-phosphate 3-epimerase, putative [Ixodes scapularis]
Length = 236
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSD 62
+ +I PSIL AD + + EE + ++GA +H DVMDG FVPN++FG V++ L+S
Sbjct: 7 TCKIGPSILNADLANIYEESQKLLESGADYLHLDVMDGHFVPNLTFGHPVVKCLKSKLPK 66
Query: 63 SVFDCHLMI--SSIDSH----INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
+ FD H+M+ + +H ++ +ADAG D TFH E++ +R I G K GV
Sbjct: 67 TFFDMHMMVRLTRFSAHTMQWVSPMADAGADQYTFHYEATSDPTGLVRKIREAGMKVGVG 126
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
I P TPV +L ++D++DM+LIMTV PGFGGQ + +PK++ ++ + + +EVDG
Sbjct: 127 IKPNTPVDVLLPLVDQVDMVLIMTVEPGFGGQSFMSDMMPKVQLLRSKF--KDLDIEVDG 184
Query: 177 GVTSRNIKSLVQAGADLLVVGSS 199
GV I+ QAGA+++V G++
Sbjct: 185 GVGPNTIQECAQAGANMIVSGTA 207
>gi|240172783|ref|ZP_04751442.1| ribulose-phosphate 3-epimerase [Mycobacterium kansasii ATCC 12478]
Length = 221
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 125/216 (57%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + S D
Sbjct: 2 IAPSILAADFARLADEAAAVH--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVSRIPMD 59
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 60 CHLMIENPDRWAPPYAEAGAHNVTFHAEAADNPVGVARDIRAAGAKAGISVKPGTPLDPY 119
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ D +L+M+V PGFGGQ+ I + K+R + ++ G+ +I +E+DGGV + I+
Sbjct: 120 LEILPHFDTLLVMSVEPGFGGQKFIPEVLSKVRTVRKMVDSGELTILIEIDGGVNADTIE 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ + + + L ++A
Sbjct: 180 QAAEAGVDCFVAGSAVYGADNPATAVEALRQRARAA 215
>gi|295098908|emb|CBK87997.1| ribulose-5-phosphate 3-epimerase [Eubacterium cylindroides T2-87]
Length = 218
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 12/205 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ D+S++ E+I + ++ AK +HFDVMDG FVPNI+FG D+++ R S D
Sbjct: 5 IAPSVLSLDYSKMTEQIEQLNQSKAKWLHFDVMDGHFVPNITFGPDILKGFRKASPLFMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTGVAINPETP 122
HLMIS + + I AG D+ITFH ES + ++ + + + G + P TP
Sbjct: 65 VHLMISDPEYYAPIFVKAGADMITFHVESFDNDTDKCLAFMQKMQDLHVQVGFTLRPATP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-----SISLEVDGG 177
+ E ++++ DM+L+M+VNPGFGGQ ++ + K+R L KR + +E+DGG
Sbjct: 125 IEPFEALLEKADMVLVMSVNPGFGGQSFMDDQLDKVRW---LYKKREEKQLNYRIEIDGG 181
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
+ K AG D LV GS F
Sbjct: 182 INHETYKKACDAGCDTLVAGSYVFK 206
>gi|126696164|ref|YP_001091050.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9301]
gi|126543207|gb|ABO17449.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9301]
Length = 252
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 137/227 (60%), Gaps = 14/227 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y +
Sbjct: 16 IQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCNVP 75
Query: 65 FDCHLMISS------IDSHINIIADAGCD--IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S ++S++N A + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + I +++++ +EV
Sbjct: 136 LNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREIRNFIIEKNLNVDIEV 195
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
DGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 196 DGGIKANWTISQCAHAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|110005237|emb|CAK99563.1| probable ribulose-phosphate 3-epimerase protein [Spiroplasma citri]
Length = 226
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 125/218 (57%), Gaps = 11/218 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+A++ L EE++ I +AGA+ IHFDVMDG FVPN++FG ++ + SYSD D
Sbjct: 6 VAPSVLSANYLILQEELATIKEAGAQWIHFDVMDGDFVPNLTFGPKILADITSYSDLYLD 65
Query: 67 CHLMI----SSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
CHLM+ SS+++++ AG IT H E + P + L + K G+AI P
Sbjct: 66 CHLMVKIKNSSVENYLLPFIKAGASAITLHYEALTPPQLTEFLNLRIKLNIKIGLAIKPL 125
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV ++ + +D++L+MTV PGFGGQ I + KI+ + + + + +EVDGG+
Sbjct: 126 TPVKVIFPYLKHLDLVLVMTVEPGFGGQTFISAAATKIKALRDYLDQNNGKTLIEVDGGI 185
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ Q G D+LV GS F G A RL L
Sbjct: 186 NAETATLCKQYGVDVLVAGSYLF---GHTDLATRLKGL 220
>gi|41407233|ref|NP_960069.1| ribulose-phosphate 3-epimerase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395584|gb|AAS03452.1| Rpe [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 232
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 128/217 (58%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRL +E + +T GA +H DVMD FVPN++ G V++SL + + D
Sbjct: 13 IAPSILSADFSRLADEAAAVT--GADWLHVDVMDNHFVPNLTIGLPVVQSLLATTTIPMD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 71 CHLMIENPDRWAPPYAEAGAHNVTFHAEATDNPIGVARDIRAAGAKAGISVKPGTPLEPY 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ + D +LIM+V PGFGGQ I + K+R A+ LI G+ +I +E+DGG+ + I+
Sbjct: 131 LEILPQFDTLLIMSVEPGFGGQSFIPEVLGKVRTARKLIDAGELTILVEIDGGINADTIE 190
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AG D V G + + G A + L++ AL
Sbjct: 191 QAAEAGVDCFVAGLAVY---GADDPAAAVEALRRQAL 224
>gi|157413195|ref|YP_001484061.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9215]
gi|157387770|gb|ABV50475.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9215]
Length = 252
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 137/227 (60%), Gaps = 14/227 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y +
Sbjct: 16 IQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMITACRKYCNVP 75
Query: 65 FDCHLMISS------IDSHINIIADAGCD--IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S ++S++N A + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + I +++++ +EV
Sbjct: 136 LNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLKKIREIRNFIIEKNLNVDIEV 195
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
DGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 196 DGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|255028964|ref|ZP_05300915.1| hypothetical protein LmonL_06916 [Listeria monocytogenes LO28]
Length = 223
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 1/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS++ ADFS L E+ + KAG+ H D+MDG FVP+ G +R + + D
Sbjct: 6 ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ + AD G DII HPE+ H R+L I GKK G+AINP T +A +
Sbjct: 66 VHLMIMNPGDYVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATI 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ +D +++MTVNPGF GQ+ ++ KI + L + + VDG ++ I L
Sbjct: 126 KELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELKKDYTFEIMVDGAISPEKISKL 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
Q G V+G+S +K E SYA+ + LK+ +
Sbjct: 186 SQLGVKGFVLGTSALLRKKE-SYAEIIKKLKQEKM 219
>gi|270694736|ref|ZP_06222967.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae HK1212]
gi|270315989|gb|EFA28038.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae HK1212]
Length = 148
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHL 69
IL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y + D HL
Sbjct: 1 ILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAPIDVHL 60
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP TP++ L+ V
Sbjct: 61 MVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNPATPLSYLDYV 120
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPK 157
+D++D++L+M+VNPGFGGQ I +T+ K
Sbjct: 121 LDKVDVVLLMSVNPGFGGQSFIPATLKK 148
>gi|157737106|ref|YP_001489789.1| ribulose-phosphate 3-epimerase [Arcobacter butzleri RM4018]
gi|157698960|gb|ABV67120.1| ribulose-phosphate 3-epimerase [Arcobacter butzleri RM4018]
Length = 213
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+A+F L EI I AG +H DVMDG FVPN++ G V+ + + D
Sbjct: 3 VAPSILSANFGNLANEIKAICDAGCDLVHVDVMDGHFVPNMTIGPVVVEPVAKVASKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A I+FH ES H R ++ I + G K + +NP + +
Sbjct: 63 IHLMVENNTFFVDLFAPCKPLYISFHIESEKHPHRLIQKIRSYGIKPAIVLNPHSRPQEI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E +++++DM+L+M+VNPGFGGQ+ I S + K ++ K LI KR+ + +EVDGGV +NI+
Sbjct: 123 EYLLEDLDMVLLMSVNPGFGGQKFIPSVVEKAKELKELINKRNPNCLIEVDGGVNDKNIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AG D++V GS F G Y K + LK
Sbjct: 183 ILKNAGVDIVVAGSYVF---GSDDYEKAIKSLK 212
>gi|332685784|ref|YP_004455558.1| ribulose-phosphate 3-epimerase [Melissococcus plutonius ATCC 35311]
gi|332369793|dbj|BAK20749.1| ribulose-phosphate 3-epimerase [Melissococcus plutonius ATCC 35311]
Length = 216
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 121/200 (60%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++VPSIL A+F+ L +EI + AG + +H DVMDG FVPNI+FG V+ S+ S ++
Sbjct: 1 MKLVPSILNANFANLEKEIKTVEMAGIEALHIDVMDGQFVPNITFGPSVVSSIHSITNLS 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I+ +AG + I H ES+PHI R ++ I G + G+ +NP T +
Sbjct: 61 LDIHLMIIQPENYIDQFIEAGANTINVHQESTPHIYRCMQMIKDKGARAGIVLNPGTSID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRN 182
+ ++ +D ILIMTVNPGFGGQ I+ T+ KI + L + +EVDGG+
Sbjct: 121 TIIPILHLVDQILIMTVNPGFGGQTFIDFTLKKIAELSELKKLNGYHYEIEVDGGIIPET 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
+AGA + V GS ++
Sbjct: 181 ALLCKKAGATMFVSGSYIYD 200
>gi|257883572|ref|ZP_05663225.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,502]
gi|257891342|ref|ZP_05670995.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,410]
gi|257894730|ref|ZP_05674383.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,408]
gi|260562635|ref|ZP_05833137.1| predicted protein [Enterococcus faecium C68]
gi|261207945|ref|ZP_05922625.1| predicted protein [Enterococcus faecium TC 6]
gi|294618042|ref|ZP_06697643.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1679]
gi|294622595|ref|ZP_06701593.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
gi|314995921|ref|ZP_07861005.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecium
TX0133a01]
gi|257819230|gb|EEV46558.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,502]
gi|257827702|gb|EEV54328.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,410]
gi|257831109|gb|EEV57716.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,408]
gi|260072963|gb|EEW61316.1| predicted protein [Enterococcus faecium C68]
gi|260077815|gb|EEW65526.1| predicted protein [Enterococcus faecium TC 6]
gi|291595713|gb|EFF27005.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1679]
gi|291597927|gb|EFF29051.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
gi|313589885|gb|EFR68730.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecium
TX0133a01]
Length = 220
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L A + + E + + +H DVMDGCFVP+++FG VI+ +R +D VFD
Sbjct: 3 IAPSLLNAPIAEVKELFEILKEKNVDYLHIDVMDGCFVPDMAFGPSVIKDIRPLTDVVFD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + + +AG DI+TFH E++ H + ++ + G K G+ NP TPV+ +
Sbjct: 63 VHLMIDTPEKIVTRFVEAGADIVTFHIEATKHAMKVIQLVKEAGAKVGITFNPATPVSFI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
E V+ +D +L+MT+NPG + I+ T+ KI Q + + + +EVDG + ++ IK
Sbjct: 123 EPVLSLVDQVLVMTINPGTENKHFIQETVVKIEQLDVIRKQNDYTYDIEVDGKIDNQTIK 182
Query: 185 SLVQAGADLLVVGSSFFNQKG 205
+AGAD+ V G FN K
Sbjct: 183 VCSKAGADIFVSGGFIFNGKN 203
>gi|295109328|emb|CBL23281.1| Pentose-5-phosphate-3-epimerase [Ruminococcus obeum A2-162]
Length = 224
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 124/210 (59%), Gaps = 11/210 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ D + +I + K G H D+MD FVPNI+ D I++L+ S + D
Sbjct: 6 VSPSLMCVDLMNVQSDIEKLEKVGVDYFHVDMMDNHFVPNITLSTDFIKALKKISKTPLD 65
Query: 67 CHLMISSIDSHINIIADAGC----DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
H+MI + I + C DII H ES+ H ++ L +I AMG K G+AINP TP
Sbjct: 66 IHMMIEHPEQ---TIPELTCCDENDIICIHYESTLHPQKVLASIRAMGVKAGIAINPATP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVT 179
V +LED++ ++DM+L MTVNPGF GQ+LI +T+ KI + + L+ ++ S +E DG V+
Sbjct: 123 VCVLEDILPDVDMVLCMTVNPGFAGQKLIPATLDKITRIRKLLNEKGYSEVLIEADGNVS 182
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEIS 208
N + AGAD+ V G SS F++ G +
Sbjct: 183 FENAVKMHAAGADIYVAGTSSIFSKAGTLE 212
>gi|254526080|ref|ZP_05138132.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9202]
gi|221537504|gb|EEE39957.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9202]
Length = 252
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 137/227 (60%), Gaps = 14/227 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y +
Sbjct: 16 IQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMITACRKYCNVP 75
Query: 65 FDCHLMISS------IDSHINIIADAGCD--IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S ++S++N A + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + I +++++ +EV
Sbjct: 136 LNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREIRNFIIEKNLNVDIEV 195
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
DGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 196 DGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|115401810|ref|XP_001216493.1| ribulose-phosphate 3-epimerase [Aspergillus terreus NIH2624]
gi|114190434|gb|EAU32134.1| ribulose-phosphate 3-epimerase [Aspergillus terreus NIH2624]
Length = 246
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 133/246 (54%), Gaps = 39/246 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M+P I PSIL+ADF+ LG E S G+ +H D+MDG FVPN++FGA V+ +RS
Sbjct: 1 MSPPAIIAPSILSADFACLGHECSTKMDQGSDWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 60 -------YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS--------PHI----- 99
+ FDCH+MI + AGCD+ FH E++ P
Sbjct: 61 VARPTEPHGKGTFDCHMMI------MEEFKSAGCDLYCFHYEAAIASVAAQDPTDTSTTR 114
Query: 100 ----RRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
R +R IH G + G+AI P+TPV +L D++ + DM+L+MTV PGFGGQ+
Sbjct: 115 RTSPRELIRYIHEQGMQAGIAIKPDTPVDVLWDILESKDEQERPDMVLVMTVYPGFGGQK 174
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ +A ++++EVDGG+ I +AGA+++V GS+ F +
Sbjct: 175 FMTSELPKVQALRARY--PNLNIEVDGGLGLGTIDQAAEAGANVIVAGSAVFGAQDPADV 232
Query: 210 AKRLND 215
+L D
Sbjct: 233 IAKLRD 238
>gi|327305539|ref|XP_003237461.1| ribulose-phosphate 3-epimerase [Trichophyton rubrum CBS 118892]
gi|326460459|gb|EGD85912.1| ribulose-phosphate 3-epimerase [Trichophyton rubrum CBS 118892]
Length = 252
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 130/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + DAGCD+ FH E++
Sbjct: 61 VQRPTCAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVESTAAKEPSDNTTTE 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAIL------EDVIDEIDMILIMTVNPGFGGQQ 149
+ + +R IH +G + G+AI PET V +L ++ I+ DM+L+MTVNPGFGGQ+
Sbjct: 121 KTNPKELIRYIHELGMQAGIAIKPETSVDVLWNILENKETIERPDMVLVMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVQALRAKY--PDMNIEVDGGLGIGTIDQAADAGANVIVAGSAVFGAQNPAEV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|283954256|ref|ZP_06371780.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
414]
gi|283794274|gb|EFC33019.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
414]
Length = 215
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 5/212 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F RL EEI I AGA +H DVMDG FVPN++FG V+ + + S
Sbjct: 1 MYVAPSLLSANFLRLEEEIKAIEAAGADLLHIDVMDGHFVPNLTFGPCVVEKISTISKIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+ + +++ I+FH ES H R I G + +NP TP+
Sbjct: 61 LDVHFMVKDVSKFVDLFIPLKPKFISFHVESEVHPIRLCEYIRNQGIHPAIVLNPHTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +I+ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ + +EVDGGV N
Sbjct: 121 SIKHMIEFVDMVLLMSVNPGFGGQKFLPLVYEKIKELREMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFF---NQKGEISYAK 211
L AGAD+LV GS F N K IS K
Sbjct: 181 ASDLELAGADILVAGSYVFSSSNYKTAISSLK 212
>gi|307181842|gb|EFN69282.1| Ribulose-phosphate 3-epimerase [Camponotus floridanus]
Length = 228
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 127/217 (58%), Gaps = 6/217 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SD 62
S +I PSIL AD ++L +E + GA +H DVMDG FVPN+SFG +++ LRS D
Sbjct: 6 SAKIGPSILNADLAQLYKESQKLLDNGADYLHLDVMDGHFVPNLSFGHPIVKCLRSKIKD 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ F+ H+M+S+ + I +ADA D TFH E + R + G K GVA+ P TP
Sbjct: 66 AFFETHMMVSNPEQWIEPMADANVDQYTFHVEPIKDVPLICRKVKEAGMKVGVALKPGTP 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V ++ D +D D+ILIMTV PGFGGQ+ +E + K+ + + +EVDGGV
Sbjct: 126 VNVITDYVDLADLILIMTVEPGFGGQKFMEPMLQKVAWLRE--NYPGLDIEVDGGVGPST 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I++ +AGA+++V G++ G AK + L+ +
Sbjct: 184 IEACAKAGANMIVSGTAVI---GSTDQAKVITTLRDT 217
>gi|183982230|ref|YP_001850521.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium marinum M]
gi|183175556|gb|ACC40666.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium marinum M]
Length = 229
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 127/219 (57%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + SD D
Sbjct: 10 IAPSILSADFARLADEAAAVR--GADWLHVDVMDGHFVPNLTLGLPVVESLLAASDIPMD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G ++ P TP+
Sbjct: 68 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGFSVKPGTPLDPY 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ D +L+M+V PGFGGQ I + K+R + L+ G+ +I +E+DGG+ + I+
Sbjct: 128 LEILPHFDTLLVMSVEPGFGGQSFIPEVLSKVRTVRKLVDSGELTILIEIDGGINADTIE 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+AG D V GS+ + G A + L++ A A+
Sbjct: 188 QAAEAGVDCFVAGSAVY---GAQDPAAAVEALRRQAGAV 223
>gi|145295719|ref|YP_001138540.1| ribulose-phosphate 3-epimerase [Corynebacterium glutamicum R]
gi|140845639|dbj|BAF54638.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 219
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFSRLGE++ + A IH D+MDG FVPN+SFGAD+ ++ +D D
Sbjct: 8 IAPSILAADFSRLGEQVLAVPDA--DWIHVDIMDGHFVPNLSFGADITAAVNRVTDKELD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ DAG D I FH E++ + I + G + G ++ P TP+
Sbjct: 66 VHLMIENPEKWVDNYIDAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGTPIEDY 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D ++ D +++M+V PGFGGQ + + K+R + +I +R ++ +E+DGG++S+ IK
Sbjct: 126 LDDLEHFDEVIVMSVEPGFGGQSFMPDQLEKVRTLRKVIDERGLNTVIEIDGGISSKTIK 185
Query: 185 SLVQAGADLLVVGSSFFNQK 204
AG D V GS+ + +
Sbjct: 186 QAADAGVDAFVAGSAVYGAE 205
>gi|301090345|ref|XP_002895391.1| ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]
gi|262099012|gb|EEY57064.1| ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]
Length = 232
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 121/201 (60%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+LA+D S L +E + AGA +H DVMDG FVPNIS+G VI+SLR ++ +
Sbjct: 6 TCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTKA 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FDCH+M+ + + IA AG D TFH E++ ++ I G K G+AI P T
Sbjct: 66 FFDCHMMVFKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+D +DM+L+MTV PGFGGQ + + K++ +A ++ +EVDGG+ I
Sbjct: 126 EAAFPYVDLVDMVLVMTVEPGFGGQSFMTDMMTKVKIIRA--KYPALDIEVDGGLGPSTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ +AGA+++V GSS F +
Sbjct: 184 DAAAKAGANMIVAGSSVFKAE 204
>gi|83770370|dbj|BAE60503.1| unnamed protein product [Aspergillus oryzae]
Length = 246
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 39/235 (16%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S G+ +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFASLGSECSTKMAQGSDWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
D FDCH+MI + +AGCD+ FH P S R
Sbjct: 61 VDRPTQPHGRGTFDCHMMI------MEEFKNAGCDLYCFHYEAAVASVAATEPADSTTTR 114
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
++ +R IH G + G+AI P+TPV +L +++ + DM+L+MTV PGFGGQ+
Sbjct: 115 KTSPKELIRYIHEEGMQAGIAIKPDTPVDVLWEILESKDEKERPDMVLVMTVYPGFGGQK 174
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ S +PK++ + ++++EVDGG+ + +AGA+++V GS+ F +
Sbjct: 175 FMASELPKVQALRERY--PNLNIEVDGGLGLGTVDQAAEAGANVIVAGSAVFGAQ 227
>gi|302338556|ref|YP_003803762.1| ribulose-phosphate 3-epimerase [Spirochaeta smaragdinae DSM 11293]
gi|301635741|gb|ADK81168.1| ribulose-phosphate 3-epimerase [Spirochaeta smaragdinae DSM 11293]
Length = 220
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 125/199 (62%), Gaps = 1/199 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF + I I + A +H DVMDG FVPNI+FG ++ +R + D
Sbjct: 7 VAPSVLSADFGDIAAAIDRIEASQADMVHLDVMDGHFVPNITFGPKMVADIRKRTKLPLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +SH++ DAG D ITFH E+ H R ++ I K G+++ P TP + +
Sbjct: 67 VHLMVDNPESHVDAFIDAGADYITFHLEAVTHAHRLIQRIRDAKVKAGISLVPSTPASAI 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI-GKRSISLEVDGGVTSRNIKS 185
++++++D++L+MTVNPGFGGQ+LI + K+ Q K + G I L VDGG+ +++
Sbjct: 127 SELLEDLDLVLVMTVNPGFGGQKLIPGCLRKVTQIKTMFEGASPILLSVDGGINRDTVRA 186
Query: 186 LVQAGADLLVVGSSFFNQK 204
V AGA+LLV GS+FF +
Sbjct: 187 AVSAGANLLVSGSAFFRAE 205
>gi|326476062|gb|EGE00072.1| ribulose-phosphate 3-epimerase [Trichophyton tonsurans CBS 112818]
Length = 252
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 37/248 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE------------------ 94
FDCH+MI+ + DAGCD+ FH E
Sbjct: 61 VQRPTCAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVKSTAAKEPSDNTTTE 120
Query: 95 -SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFGG 147
+SP + + IH +G + G+AI PET V +L D+ I+ DM+L+MTVNPGFGG
Sbjct: 121 KTSP--KELIHYIHELGMQAGIAIKPETSVDVLWDILENKEAIERPDMVLVMTVNPGFGG 178
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
Q+ + S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 179 QKFMASELPKVQALRAKY--PDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAQNPA 236
Query: 208 SYAKRLND 215
+L +
Sbjct: 237 EVIAKLRE 244
>gi|262341113|ref|YP_003283968.1| ribulose-phosphate 3-epimerase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272450|gb|ACY40358.1| ribulose-phosphate 3-epimerase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 221
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+ + L +I + ++ A H D+MD FV NISFG+ + ++ Y++ D
Sbjct: 5 IAPSLLSANLAFLHRDIKMLNESEADWFHIDIMDSSFVSNISFGSLFTKYVKKYANKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I + G D + H E+ H+ +++ +I G K GVA+NP TPV +L
Sbjct: 65 VHLMILEPERYIKKFKNCGSDHLHIHYEACIHLNKTIFSIKKYGMKVGVAVNPHTPVFLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D+I +ID +L+M+VNPG GQ+ I T K+ K LI K+ S +EVDGG+ N
Sbjct: 125 QDIIKDIDFVLLMSVNPGSSGQKFINQTYQKLEDTKNLILKKDSSALIEVDGGINLENAS 184
Query: 185 SLVQAGADLLVVGSSFF 201
L + GAD+LV G++ F
Sbjct: 185 LLFKNGADILVSGTTIF 201
>gi|116872124|ref|YP_848905.1| ribulose-5-phosphate 3-epimerase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741002|emb|CAK20122.1| ribulose-5-phosphate 3-epimerase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 223
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 1/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ ADFS L +EI + +AG+ H D+MDG FVP+ G + +R+ + + D
Sbjct: 6 LCPSMMCADFSNLQKEIEELDRAGSDIFHIDIMDGEFVPSFGMGLQDFKEIRNKTQKLVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++ + AD+G DII HPE+ H R+L I GKKTGVAINP T ++ +
Sbjct: 66 VHLMIMNPGNYVELFADSGADIIYIHPEADKHPARTLDKIRKKGKKTGVAINPGTAISTI 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ +D +++MTVNPGF GQ ++ KI + L K + VDG ++ I L
Sbjct: 126 KELLPLVDYLMVMTVNPGFSGQTYLDYVDDKIIELVQLKKKYPFEIMVDGAISPEKIAKL 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ G V+G+S K E YAK + LK+ +
Sbjct: 186 SKIGVRGFVLGTSALFGKKE-DYAKIIKHLKQEDM 219
>gi|300120965|emb|CBK21207.2| unnamed protein product [Blastocystis hominis]
Length = 195
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 126/194 (64%), Gaps = 5/194 (2%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I + GA +H D+MDG FVPN++ GA V++ +R + + DCHLM+ + +S+I + DAG
Sbjct: 2 IIEKGADWLHIDIMDGHFVPNLTIGAPVVKCIRKHLNVFMDCHLMVDNPESYIIPLKDAG 61
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
++ TFH E++ + + ++ +H G G+ + P TPV+ +E+ I +D++L+MTV PGF
Sbjct: 62 ANLFTFHVEATKNPKDVIQRVHEAGMYCGITLKPGTPVSAIEEFIPLVDLVLVMTVEPGF 121
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
GGQ+ +E + K+ +AL +++ +EVDGGV+++N + + GA++LV GS+ F G
Sbjct: 122 GGQKFMEECLVKVEAVRAL--SKTVYIEVDGGVSAKNAELCARKGANVLVSGSAIF---G 176
Query: 206 EISYAKRLNDLKKS 219
A + ++K++
Sbjct: 177 SADIAATIREMKEA 190
>gi|118617419|ref|YP_905751.1| ribulose-phosphate 3-epimerase [Mycobacterium ulcerans Agy99]
gi|118569529|gb|ABL04280.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium ulcerans Agy99]
Length = 232
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 127/219 (57%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + SD D
Sbjct: 13 IAPSILSADFARLADEAAAVR--GADWLHVDVMDGHFVPNLTLGLPVVESLLAASDIPMD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G ++ P TP+
Sbjct: 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGSSVKPGTPLDPY 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ D +L+M+V PGFGGQ I + K+R + L+ G+ +I +E+DGG+ + I+
Sbjct: 131 LEILPHFDTLLVMSVEPGFGGQSFIPEVLSKVRTVRKLVDSGELTILIEIDGGINADTIE 190
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+AG D V GS+ + G A + L++ A A+
Sbjct: 191 QAAEAGVDCFVAGSAVY---GAQDPAAAVEALRRQAGAV 226
>gi|296129703|ref|YP_003636953.1| ribulose-phosphate 3-epimerase [Cellulomonas flavigena DSM 20109]
gi|296021518|gb|ADG74754.1| ribulose-phosphate 3-epimerase [Cellulomonas flavigena DSM 20109]
Length = 241
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ L ++ + A A +H DVMD FVPN++ G V+R L +
Sbjct: 22 VLINPSILSADFANLERDLQLV--ASADYVHVDVMDQHFVPNLTLGLPVVRRLAEVTPVP 79
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ D A+AG +TFH E++ R R + A G + VA+ P +PV
Sbjct: 80 LDVHLMVEDADRWAPQYAEAGAASVTFHAEATQAPVRLARELRAGGVRAAVALRPASPVE 139
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
D++DE+DM+L+MTV PGFGGQ IE T+ K+R+A+A I + ++VDGGV+
Sbjct: 140 PFLDLLDEVDMVLVMTVEPGFGGQAFIEGTLAKVRRARAAIDASGAATWVQVDGGVSRDT 199
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKS 219
I + +AGA++ V GS+ F E+ +RL + S
Sbjct: 200 IGRIARAGANVFVAGSAVFGADDVAQEVEALRRLAEHPTS 239
>gi|310793298|gb|EFQ28759.1| ribulose-phosphate 3 epimerase [Glomerella graminicola M1.001]
Length = 251
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 129/234 (55%), Gaps = 33/234 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M P + PSILAADF G + S + GA +H D+MDG FVPNIS+G V+ +R
Sbjct: 1 MAPKAIVAPSILAADFGNFGHDCSKTIEQGADWLHVDIMDGHFVPNISWGPGVVAKIRGH 60
Query: 59 ------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS-------PHIR----- 100
++ FDCH+M+S + + DAG ++ FH E++ P ++
Sbjct: 61 VEKPIEAWGKGTFDCHMMVSEPKKWVKGMKDAGANLYCFHYEAAFSSDSDNPEVQSNGKT 120
Query: 101 --RSL-RTIHAMGKKTGVAINPETPVAIL------EDVIDEIDMILIMTVNPGFGGQQLI 151
R+L R IH G GVAI P T V ++ ED ++ DM+LIMTV PGFGGQ+ +
Sbjct: 121 NPRALTRFIHEQGMLAGVAIKPATSVDVVWELLESEDPLERPDMVLIMTVEPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
S +PK++ AL K +++EVDGG+T + AGA+++V GS+ F +
Sbjct: 181 ASQLPKVQ---ALREKYPELNIEVDGGLTGSTVHQAADAGANVIVAGSAVFGAQ 231
>gi|241957073|ref|XP_002421256.1| pentose-5-phosphate 3 epimerase, putative; ribulose-phosphate
3-epimerase, putative [Candida dubliniensis CD36]
gi|223644600|emb|CAX40588.1| pentose-5-phosphate 3 epimerase, putative [Candida dubliniensis
CD36]
Length = 230
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 9/205 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSY----S 61
I PSILAADF+ LG + G + +H DVMDG FVPNIS G +I SLR S
Sbjct: 6 IAPSILAADFANLGCNCKRVVDTGDVEWLHLDVMDGHFVPNISLGPPIISSLRKQFPRES 65
Query: 62 DS--VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D VFDCH+M+S D I IA AG D TFH E++ R ++ I G K +AI P
Sbjct: 66 DKPIVFDCHMMVSEPDEWIEEIAKAGGDSYTFHFEATKDPARVIKKIKEHGLKAAMAIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV + D++DM+L+MTV PGFGGQ+ + +PK+ + + ++VDGG+
Sbjct: 126 KTPVEEVFPYADDLDMVLVMTVEPGFGGQKFMPDMMPKVETLREKY--PDLDVQVDGGLG 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK 204
I+ AGA+++V G+S F +
Sbjct: 184 KDTIQPAADAGANVIVAGTSVFKPE 208
>gi|206901657|ref|YP_002251148.1| ribulose-phosphate 3-epimerase [Dictyoglomus thermophilum H-6-12]
gi|206740760|gb|ACI19818.1| ribulose-phosphate 3-epimerase [Dictyoglomus thermophilum H-6-12]
Length = 220
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+AD + + I + K A IH DVMDG FVPN+S+G ++R+LRS D
Sbjct: 2 NIKVFPSILSADLLNMEKSIE-LVKDLADAIHIDVMDGHFVPNLSYGPALVRALRSKYDI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM+ ++ +++ DAG + + FH E++ H +R L+ I G + + +NP TP+
Sbjct: 61 SLNVHLMVERPENFVDMFMDAGANHLGFHIEATYHPQRLLKYIRDHGVRPFITLNPATPL 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSR 181
+E ++ E+DM+LIMTVNPG+GGQ+ + + KIR + + K I L+ VDGG+
Sbjct: 121 NTIEYLLGEVDMVLIMTVNPGYGGQEFLPFCLRKIRTLREMALKEGIDLDIMVDGGIDLN 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
+V+AGA++L+ G++ F +
Sbjct: 181 TAPLVVEAGANILISGNTVFTSE 203
>gi|159483647|ref|XP_001699872.1| ribulose phosphate-3-epimerase [Chlamydomonas reinhardtii]
gi|158281814|gb|EDP07568.1| ribulose phosphate-3-epimerase [Chlamydomonas reinhardtii]
Length = 254
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 127/232 (54%), Gaps = 23/232 (9%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ + PSIL+ADF+RL EE + GA +H DVMDG FVPN++ GA V+ SLR ++D
Sbjct: 16 PAATVAPSILSADFARLAEECKRMVDLGADWLHVDVMDGHFVPNLTIGAPVVASLRKHTD 75
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESS----PHIRRSL-------------RT 105
+ DCHLM+S+ + + A AG D+ TFH E++ P +L R
Sbjct: 76 AFLDCHLMVSNPEQWVKDFAKAGADMFTFHLEAAAGPGPDDWHALSPDTANQTVVDMCRG 135
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I A G+AI P TP ++ + E +DM+L+MTV PGFGGQ + + K A
Sbjct: 136 IKAAHMHVGIAIKPSTPPELVAPYVAEGLVDMVLVMTVEPGFGGQSFMPQAVAK---AAF 192
Query: 164 LIGK-RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L K ++++VDGG+ I +AGA+++V GS+ F + K L
Sbjct: 193 LRNKFPDLNIQVDGGLAPNTIDRAAEAGANVIVAGSAVFGAADPAAVMKTLK 244
>gi|38233906|ref|NP_939673.1| ribulose-phosphate 3-epimerase [Corynebacterium diphtheriae NCTC
13129]
gi|38200167|emb|CAE49848.1| ribulose-phosphate 3-epimerase [Corynebacterium diphtheriae]
Length = 224
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 120/197 (60%), Gaps = 4/197 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF +L EEI ++ A IH DVMDG FVPN+SFGAD+ + R + D
Sbjct: 10 IAPSILAADFRKLEEEIQSVNHA--DWIHVDVMDGHFVPNLSFGADITCAARLSTSQPLD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ ++ AG + FH E++ + R I G + G ++ P TP+
Sbjct: 68 VHLMIENPENWVDSYIKAGAFTVIFHVEATDNPVDLARHIREQGARAGFSLKPSTPIDPY 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
D+++E D +LIM+V PGFGGQ+ + + K+RQ + +I +R+ +++E+DGG++ I+
Sbjct: 128 LDMLEEFDEVLIMSVEPGFGGQKFMPEQLEKVRQLRRIIDERNLDVTIEIDGGISESTIR 187
Query: 185 SLVQAGADLLVVGSSFF 201
+AG D V GS+ F
Sbjct: 188 QAAEAGCDAFVAGSAVF 204
>gi|16802777|ref|NP_464262.1| hypothetical protein lmo0735 [Listeria monocytogenes EGD-e]
gi|47095300|ref|ZP_00232911.1| Ribulose-phosphate 3 epimerase family superfamily [Listeria
monocytogenes str. 1/2a F6854]
gi|224499605|ref|ZP_03667954.1| hypothetical protein LmonF1_07874 [Listeria monocytogenes Finland
1988]
gi|224501960|ref|ZP_03670267.1| hypothetical protein LmonFR_05507 [Listeria monocytogenes FSL
R2-561]
gi|254828819|ref|ZP_05233506.1| ribulose-phosphate epimerase [Listeria monocytogenes FSL N3-165]
gi|254830275|ref|ZP_05234930.1| hypothetical protein Lmon1_02902 [Listeria monocytogenes 10403S]
gi|254900029|ref|ZP_05259953.1| hypothetical protein LmonJ_09450 [Listeria monocytogenes J0161]
gi|254911418|ref|ZP_05261430.1| ribulose-phosphate 3 epimerase family superfamily protein [Listeria
monocytogenes J2818]
gi|254935745|ref|ZP_05267442.1| ribulose-phosphate epimerase [Listeria monocytogenes F6900]
gi|284801066|ref|YP_003412931.1| hypothetical protein LM5578_0815 [Listeria monocytogenes 08-5578]
gi|284994208|ref|YP_003415976.1| hypothetical protein LM5923_0770 [Listeria monocytogenes 08-5923]
gi|16410124|emb|CAC98813.1| lmo0735 [Listeria monocytogenes EGD-e]
gi|47016371|gb|EAL07293.1| Ribulose-phosphate 3 epimerase family superfamily [Listeria
monocytogenes str. 1/2a F6854]
gi|258601231|gb|EEW14556.1| ribulose-phosphate epimerase [Listeria monocytogenes FSL N3-165]
gi|258608329|gb|EEW20937.1| ribulose-phosphate epimerase [Listeria monocytogenes F6900]
gi|284056628|gb|ADB67569.1| hypothetical protein LM5578_0815 [Listeria monocytogenes 08-5578]
gi|284059675|gb|ADB70614.1| hypothetical protein LM5923_0770 [Listeria monocytogenes 08-5923]
gi|293589360|gb|EFF97694.1| ribulose-phosphate 3 epimerase family superfamily protein [Listeria
monocytogenes J2818]
Length = 223
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 1/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS++ ADFS L E+ + KAG+ H D+MDG FVP+ G +R + + D
Sbjct: 6 ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ + AD G DII HPE+ H R+L I GKK G+AINP T +A +
Sbjct: 66 VHLMIMNPGDYVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATI 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ +D +++MTVNPGF GQ+ ++ KI + L + + VDG ++ I L
Sbjct: 126 KELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELKKDYTFEIMVDGAISPEKISKL 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
Q G V+G+S K E SYA+ + LK+ +
Sbjct: 186 SQLGVKGFVLGTSALFGKKE-SYAEIIKKLKQEKM 219
>gi|196000364|ref|XP_002110050.1| hypothetical protein TRIADDRAFT_21066 [Trichoplax adhaerens]
gi|190588174|gb|EDV28216.1| hypothetical protein TRIADDRAFT_21066 [Trichoplax adhaerens]
Length = 227
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 5/213 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL +D S L E + + GA +H DVMDG FVPN++FG V+ LRS +S
Sbjct: 7 SAMIGPSILNSDLSVLANEAKKLVECGADYLHLDVMDGHFVPNLTFGHPVVECLRSKVES 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H+M+++ + + +ADAG TFH E++ + + +I G K G+AI P+TPV
Sbjct: 67 FFDVHMMVANPEKWVKPMADAGVQQYTFHIEATDNPLELIDSIKKTGMKVGIAIKPKTPV 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ID +MIL+MTV PGFGGQ+ + + K+ ++ +++++ VDGGV+ NI
Sbjct: 127 ETILPYIDHANMILVMTVEPGFGGQKFMSDMMSKVAFLRSKF--KTLNIGVDGGVSPSNI 184
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
+AGA+++V GS+ + +G IS K +
Sbjct: 185 DQSAKAGANMIVSGSAIIKSQDPRGVISTLKSV 217
>gi|19552810|ref|NP_600812.1| ribulose-phosphate 3-epimerase [Corynebacterium glutamicum ATCC
13032]
gi|62390480|ref|YP_225882.1| ribulose-phosphate 3-epimerase [Corynebacterium glutamicum ATCC
13032]
gi|21324367|dbj|BAB98991.1| Pentose-5-phosphate-3-epimerase [Corynebacterium glutamicum ATCC
13032]
gi|41325817|emb|CAF21606.1| RIBULOSE-5-PHOSPHATE-3-EPIMERASE [Corynebacterium glutamicum ATCC
13032]
Length = 219
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFSRLGE++ + A IH D+MDG FVPN+SFGAD+ ++ +D D
Sbjct: 8 IAPSILAADFSRLGEQVLAVPDA--DWIHVDIMDGHFVPNLSFGADITAAVNRVTDKELD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ DAG D I FH E++ + I + G + G ++ P TP+
Sbjct: 66 VHLMIENPEKWVDNYIDAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGTPIEDY 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D ++ D +++M+V PGFGGQ + + K+R + +I +R ++ +E+DGG++++ IK
Sbjct: 126 LDDLEHFDEVIVMSVEPGFGGQSFMPEQLEKVRTLRKVIDERGLNTVIEIDGGISAKTIK 185
Query: 185 SLVQAGADLLVVGSSFFNQK 204
AG D V GS+ + +
Sbjct: 186 QAADAGVDAFVAGSAVYGAE 205
>gi|87306939|ref|ZP_01089085.1| Ribulose-phosphate 3-epimerase [Blastopirellula marina DSM 3645]
gi|87290312|gb|EAQ82200.1| Ribulose-phosphate 3-epimerase [Blastopirellula marina DSM 3645]
Length = 197
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 115/198 (58%), Gaps = 2/198 (1%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + AG K +H DVMDG FVPNIS+G ++ + R +D D HLMI +I
Sbjct: 1 MERLLAAGVKALHLDVMDGIFVPNISYGMPIVAAFRKLTDLPLDVHLMIEKPQDYIRQFH 60
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+AG D++T H E+ + LR I ++G GVAINP+TP+ + D + E D+ L+M+VN
Sbjct: 61 EAGADVMTIHAEAVDDVASILREIKSLGAGAGVAINPDTPLETIVDALPEADLALMMSVN 120
Query: 143 PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
GFGGQ+ + KIR+ + L + +E+DGGV I +AGADLLVVGS+ F
Sbjct: 121 AGFGGQKFNPVALDKIREVRRL--APDLLIEIDGGVNLDTIGRCTEAGADLLVVGSAIFG 178
Query: 203 QKGEISYAKRLNDLKKSA 220
+ ++ + LN +A
Sbjct: 179 KPDYVTAVRELNSAAAAA 196
>gi|194863774|ref|XP_001970607.1| GG10731 [Drosophila erecta]
gi|190662474|gb|EDV59666.1| GG10731 [Drosophila erecta]
Length = 221
Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 126/222 (56%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR+
Sbjct: 1 MSVQPKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNK 60
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I +ADAG ++ TFH E + R R + G K G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRQVRESGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V LE + D++L+MTV PGFGGQ + +PK++ + S+ +EVDGGV
Sbjct: 121 GTEVQDLEKYVSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRD--NYPSLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+++V G++ + K + D+ +S L
Sbjct: 179 PKTIHCCAEAGANMIVSGTAVVGASDQAQVIKEMRDVVRSYL 220
>gi|169335083|ref|ZP_02862276.1| hypothetical protein ANASTE_01490 [Anaerofustis stercorihominis DSM
17244]
gi|169257821|gb|EDS71787.1| hypothetical protein ANASTE_01490 [Anaerofustis stercorihominis DSM
17244]
Length = 224
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SI+ + + G E+ + KAGA IHFD+MDG +V NI+ G ++ ++ +
Sbjct: 4 LKVSASIMCGNPMKFGWELDKLEKAGADLIHFDMMDGHYVENIAMGIYMLEQMKKRTSIP 63
Query: 65 FDCHLMISSIDSHINIIAD--AGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HL + + HI IA D I HPES+ HI R LR I MG K GVAINP T
Sbjct: 64 FDVHLAMFHPEKHIEKIASILDENDCIHVHPESTVHIHRVLRDIKRMGVKAGVAINPATN 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
LE +ID+IDM+L MTV+PGF GQ+ I+ T+ KI + + R+ + + VDG + +
Sbjct: 124 EDCLEYLIDDIDMVLAMTVSPGFAGQKFIKQTLGKIENIRKMADDRNPDLMIAVDGNINA 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I V+AGAD+LV G+S + + Y + + +K S
Sbjct: 184 ETIPGCVKAGADVLVAGTSSIFKGDDADYKELIQKMKDS 222
>gi|269795117|ref|YP_003314572.1| ribulose-5-phosphate 3-epimerase [Sanguibacter keddieii DSM 10542]
gi|269097302|gb|ACZ21738.1| ribulose-5-phosphate 3-epimerase [Sanguibacter keddieii DSM 10542]
Length = 220
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 122/212 (57%), Gaps = 7/212 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L ++ I+ A H DVMD FVPN++ G ++ + S D
Sbjct: 5 VSPSILSADFTNLERDLQAISTA--DYAHVDVMDNHFVPNLTLGLPIVERIVQVSPVPID 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AG +TFH E++ R R + +G + G+A+ P TPV
Sbjct: 63 VHLMIEDPDRWAPGFAEAGAQSVTFHAEAAAAPVRLARELRRLGARAGLALKPATPVEPY 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
D++ EIDMIL+MTV PGFGGQ IE T+PKI++A+ IG+ + L+VDGG++ I
Sbjct: 123 LDLLSEIDMILVMTVEPGFGGQSFIEGTLPKIQRARRAIGEADLDVWLQVDGGISRATID 182
Query: 185 SLVQAGADLLVVGSSFFNQ---KGEISYAKRL 213
+AGA++ V GS+ + EI +R+
Sbjct: 183 RAAEAGANVFVAGSAVYGADDIPAEIDTLRRM 214
>gi|118468662|ref|YP_887382.1| ribulose-phosphate 3-epimerase [Mycobacterium smegmatis str. MC2
155]
gi|118169949|gb|ABK70845.1| ribulose-phosphate 3-epimerase [Mycobacterium smegmatis str. MC2
155]
Length = 225
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 122/200 (61%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E++ + A +H DVMD FVPN++ G V+ SL +D+ D
Sbjct: 6 IAPSILAADFARLADEVAAVGDA--DWLHVDVMDNHFVPNLTLGLPVVESLLKVTDTPMD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + + A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 64 CHLMIENPERWAPGYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGLSVKPGTPLEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ E D +L+M+V PGFGGQ+ I + K+ A+ L+ G+ ++ +E+DGG+ + I+
Sbjct: 124 LEILREFDTLLVMSVEPGFGGQKFIPEVLAKVATARRLVDSGELTVVVEIDGGINADTIE 183
Query: 185 SLVQAGADLLVVGSSFFNQK 204
+AG D V GS+ ++ +
Sbjct: 184 QAAEAGVDCFVAGSAVYSAE 203
>gi|148925830|ref|ZP_01809517.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844816|gb|EDK21920.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|307747383|gb|ADN90653.1| Ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
M1]
Length = 217
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 3 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ I+FH ES H R I + G + +NP TP+
Sbjct: 63 LDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPID 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ + +EVDGGV N
Sbjct: 123 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L ++GAD+LV GS F+ Y ++ LK
Sbjct: 183 ASDLEESGADILVAGSYIFSSN---DYKTAISSLK 214
>gi|299755353|ref|XP_001828610.2| ribulose-phosphate 3-epimerase [Coprinopsis cinerea okayama7#130]
gi|298411187|gb|EAU93213.2| ribulose-phosphate 3-epimerase [Coprinopsis cinerea okayama7#130]
Length = 242
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PS+LA+DF +L E + K GA+ +H DVMDG FVPNI+ GA ++ +R
Sbjct: 2 PRAIISPSVLASDFGQLTAECKRMIKGGAEWLHMDVMDGHFVPNITMGAPILSCVRKGIP 61
Query: 63 SVF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+F DCH+M++ + ++ IADAG + FH E++ + IH K GVAI+P+T
Sbjct: 62 DIFMDCHMMVAQPERWVDDIADAGGAMYCFHIEATSDPIALIHQIHKRNMKAGVAISPDT 121
Query: 122 PVAILEDVIDEI-DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
P + D I ++ DM+L+MTV PG GGQ+ IE +PK+ + +A + I EVDGGV
Sbjct: 122 PSTAITDEIGQLADMLLVMTVYPGRGGQKFIERCVPKVSELRARFPDKDI--EVDGGVGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ I +AG++++V G++ F + K L +
Sbjct: 180 KTIDVCAEAGSNVIVAGTAIFGADDPPAVIKSLKE 214
>gi|57237505|ref|YP_178519.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni RM1221]
gi|157414744|ref|YP_001482000.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81116]
gi|205355327|ref|ZP_03222098.1| ribulose phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|283955873|ref|ZP_06373363.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
1336]
gi|57166309|gb|AAW35088.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni RM1221]
gi|157385708|gb|ABV52023.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81116]
gi|205346561|gb|EDZ33193.1| ribulose phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|283792533|gb|EFC31312.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
1336]
gi|315057871|gb|ADT72200.1| Ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
S3]
gi|315931110|gb|EFV10084.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
327]
Length = 215
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ I+FH ES H R I + G + +NP TP+
Sbjct: 61 LDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ + +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L ++GAD+LV GS F+ Y ++ LK
Sbjct: 181 ASDLEESGADILVAGSYIFSSN---DYKTAISSLK 212
>gi|108804201|ref|YP_644138.1| ribulose-5-phosphate 3-epimerase [Rubrobacter xylanophilus DSM
9941]
gi|108765444|gb|ABG04326.1| ribulose-5-phosphate 3-epimerase [Rubrobacter xylanophilus DSM
9941]
Length = 225
Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 120/194 (61%), Gaps = 3/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADF+ L +E+ + GA+ +HFDVMD FVPN++ G V SL ++ D H
Sbjct: 15 PSILSADFAHLADEVERARRGGAELVHFDVMDNHFVPNLTVGPAVAASLVEATELPVDAH 74
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
L + + DS I +AG I+ E++ H+ R+L+ I + G + GVA+NP TP +L
Sbjct: 75 LQVENPDSLIPAFIEAGVASISVQVEAATHLHRTLKLIKSGGCEAGVALNPTTPPELLGW 134
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ +D +L+M+VNPGFGGQ+ I + K+R+ + + + +EVDGG+T+ +V+
Sbjct: 135 ALPYLDYVLVMSVNPGFGGQRFIPEMVQKVRRIREMA---PVPVEVDGGITAETAPLMVK 191
Query: 189 AGADLLVVGSSFFN 202
AGA +LV GS+ +
Sbjct: 192 AGAQVLVAGSAVYR 205
>gi|91070298|gb|ABE11216.1| ribulose-phosphate 3-epimerase [uncultured Prochlorococcus marinus
clone HF10-88D1]
Length = 252
Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 136/227 (59%), Gaps = 14/227 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y D
Sbjct: 16 IQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCDVP 75
Query: 65 FDCHLMISS------IDSHINIIADAGCD--IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S ++S++ A + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLESYVKATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + + +++++ +EV
Sbjct: 136 LNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREIRNFVIEKNLNVDIEV 195
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
DGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 196 DGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|111024117|ref|YP_707089.1| ribulose-phosphate 3-epimerase [Rhodococcus jostii RHA1]
gi|110823647|gb|ABG98931.1| ribulose-phosphate 3-epimerase [Rhodococcus jostii RHA1]
Length = 227
Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 125/216 (57%), Gaps = 7/216 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL EE + AGA +H DVMD FVPN++ G V++SL + +D D
Sbjct: 6 IAPSILSADFARLAEEADAV--AGADWLHVDVMDAHFVPNLTLGLPVVQSLLAATDIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI A+AG +TFH E++ R R I A G K G+++ P TP+
Sbjct: 64 CHLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPRSVARDIRAAGAKAGLSVKPGTPIEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ + D +L+M+V PGFGGQ I + K + + L+ G+ + +E+DGG+ + ++
Sbjct: 124 LEILKDFDTLLVMSVEPGFGGQSFIPEVLSKAKAVRRLVDSGELRLVVEIDGGINADTVE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG D V GS+ + G A+ + L+ SA
Sbjct: 184 AAAEAGVDCFVAGSAVY---GTSDPAEAVRALRASA 216
>gi|158604967|gb|ABW74782.1| ribulose-phosphate 3-epimerase [Campylobacter concisus 13826]
Length = 215
Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF L EI I +AG +H DVMDG FVPN++ G V+ ++ +
Sbjct: 1 MYVAPSILSADFGNLAAEIRAICEAGCDLVHVDVMDGHFVPNLTIGPVVVSAVAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + ++ +TFH E H R + I G G+ +NP TPV+
Sbjct: 61 LDIHLMVENNSFFADLFLPLKPKFLTFHIEEEKHPMRLIDHIRKNGVSPGIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +IDE+DM+L+M+VNPGFGGQ+ + + K R +ALI +++ +EVDGGV N
Sbjct: 121 AIEHIIDEVDMVLLMSVNPGFGGQKFMPVVLEKTRALRALIERKNAKCLIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L +AGAD+LV GS F+ SY + + +K
Sbjct: 181 APDLEEAGADILVAGSYIFSSN---SYEQAIRAIK 212
>gi|213513738|ref|NP_001135377.1| ribulose-phosphate 3-epimerase [Salmo salar]
gi|209738366|gb|ACI70052.1| Ribulose-phosphate 3-epimerase [Salmo salar]
gi|223647070|gb|ACN10293.1| Ribulose-phosphate 3-epimerase [Salmo salar]
gi|223672939|gb|ACN12651.1| Ribulose-phosphate 3-epimerase [Salmo salar]
Length = 228
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S +I PSIL++D + LG E + + GA +H DVMDG FVPNI+FG ++ LRS
Sbjct: 1 MSYSAKIGPSILSSDLACLGSECVRMMECGADYLHLDVMDGHFVPNITFGHPMVECLRSC 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH ES+ + ++ I G K G+AI
Sbjct: 61 VGPDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLESTTNAGNLIKEIRETGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ ++ S+ +EVDGGV
Sbjct: 121 PGTTVEELAPWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I +AGA+++V GS+
Sbjct: 179 GPSTIHKCAEAGANMIVSGSA 199
>gi|123966052|ref|YP_001011133.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9515]
gi|123200418|gb|ABM72026.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9515]
Length = 251
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 127/208 (61%), Gaps = 11/208 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G + ++ +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 16 IQIIPSVLPADWANMGGCVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCKVP 75
Query: 65 FDCHLMISS------IDSHINIIADAGCD--IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S ++S++N + ++ H ES+ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLESYVNSTKGPNGEPGVVIAHAESNVHLHRILGRIRDLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEV 174
+NP TP ++E+++D +D +L+MTVNPGFGGQ I + + KIR+ + + ++ +I +EV
Sbjct: 136 LNPHTPFEMIENIMDMVDHVLVMTVNPGFGGQAYIPTMLSKIRKIREFVIEKNLNIDIEV 195
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFF 201
DGG+ + I AGA+ + GS F
Sbjct: 196 DGGIKANWTISQCAAAGANCFIAGSGMF 223
>gi|295698725|ref|YP_003603380.1| ribulose-phosphate 3-epimerase [Candidatus Riesia pediculicola
USDA]
gi|291157202|gb|ADD79647.1| ribulose-phosphate 3-epimerase [Candidatus Riesia pediculicola
USDA]
Length = 236
Score = 155 bits (391), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQI-HFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
I SIL+A+ + LG++I+ + ++G I HFD+MD +VPN++FG + +SL Y S
Sbjct: 12 IAISILSANLASLGKDIAKLVRSGLTDIIHFDIMDNHYVPNLTFGPILCKSLIEYGIQSN 71
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F HLM + I + G I H E +++ LR I G K G+ NP+ +
Sbjct: 72 FHIHLMTDPSERLIREFIELGVHQILLHVEEGITLKKELRIIRENGCKAGIVFNPKMSLE 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
IL +I+EID +LIM+VNPGFGGQ IE++I ++ +A+++I + + I L VDGG+ +N
Sbjct: 132 ILTTLINEIDSVLIMSVNPGFGGQSFIENSIKRLLEARSIIDRSGKDILLGVDGGINLKN 191
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K +V+ G D+LV+GS+ FN+ +Y + LN +K
Sbjct: 192 LKKIVETGVDILVIGSAIFNRSR--NYVEILNVFRK 225
>gi|68471245|ref|XP_720399.1| hypothetical protein CaO19.7108 [Candida albicans SC5314]
gi|77022410|ref|XP_888649.1| hypothetical protein CaO19_7108 [Candida albicans SC5314]
gi|46442264|gb|EAL01555.1| hypothetical protein CaO19.7108 [Candida albicans SC5314]
gi|76573462|dbj|BAE44546.1| hypothetical protein [Candida albicans]
Length = 230
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 123/216 (56%), Gaps = 12/216 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS-- 63
I PSILAADF+ LG + G + +H DVMDG FVPNIS G +I SLR
Sbjct: 6 IAPSILAADFANLGCNCKRVVDTGDVEWLHLDVMDGHFVPNISLGPPIISSLRKQFPREG 65
Query: 64 ----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
VFDCH+M+S D I IA AG D TFH E++ R ++ I G K +AI P
Sbjct: 66 DKPIVFDCHMMVSEPDEWIEEIAKAGGDSYTFHFEATKDPARVIKKIKEHGLKAAMAIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV + +++DM+L+MTV PGFGGQ+ + +PK+ + ++ ++VDGG+
Sbjct: 126 KTPVEEVFPYAEDLDMVLVMTVEPGFGGQKFMPDMMPKVETLREKY--PNLDVQVDGGLG 183
Query: 180 SRNIKSLVQAGADLLVVGSSFF---NQKGEISYAKR 212
I+ AGA+++V G+S F + K + Y K+
Sbjct: 184 KDTIQPAADAGANVIVAGTSVFKPEDPKPVVQYLKQ 219
>gi|269977345|ref|ZP_06184318.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris 28-1]
gi|306818714|ref|ZP_07452436.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris ATCC 35239]
gi|307700970|ref|ZP_07637995.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris FB024-16]
gi|269934648|gb|EEZ91209.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris 28-1]
gi|304648400|gb|EFM45703.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris ATCC 35239]
gi|307613965|gb|EFN93209.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris FB024-16]
Length = 218
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L D ++++ I A +H D+MD FVPN+++G +++ +
Sbjct: 3 IKIYPSVLNCDQMHFADQLNAIDSADG--VHLDIMDNHFVPNLTWGLPTAQAVVKSTTLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D A AGC I++FH E++ R+ I +G K G+A+NP TPV+
Sbjct: 61 VDAHLMIDNPDRWAPEYAKAGCSIVSFHFEAAKAPLRTAEAIRELGAKPGIALNPATPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+L D++ D +L+M+V PGFGGQ I PKI++ + +I + S +EVDGG++ +N
Sbjct: 121 VLADILPRFDQVLLMSVEPGFGGQGFIPEVYPKIKRLRKMIEEARLSTDIEVDGGISDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I +V+AGA+++V GS F ++ + AK
Sbjct: 181 IAKVVEAGANVIVAGSFVFKREPARAIAK 209
>gi|226366357|ref|YP_002784140.1| ribulose-phosphate 3-epimerase [Rhodococcus opacus B4]
gi|226244847|dbj|BAH55195.1| ribulose-5-phosphate 3-epimerase [Rhodococcus opacus B4]
Length = 227
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 7/216 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL EE + AGA +H DVMD FVPN++ G V+ SL + +D D
Sbjct: 6 IAPSILSADFARLAEEADAV--AGADWLHVDVMDAHFVPNLTLGLPVVTSLLAATDIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI A+AG +TFH E++ R R I A G K G+++ P TP+
Sbjct: 64 CHLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPRSVARDIRAAGAKAGLSVKPGTPIEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ + D +L+M+V PGFGGQ I + K + + L+ G+ + +E+DGG+ S ++
Sbjct: 124 LEILKDFDTLLVMSVEPGFGGQSFIPEVLSKAKAVRRLVDSGELRLVVEIDGGINSDTVE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG D V GS+ + G A+ + L+ SA
Sbjct: 184 AAAEAGVDCFVAGSAVY---GTGDPAEAVRALRASA 216
>gi|50424733|ref|XP_460956.1| DEHA2F13618p [Debaryomyces hansenii CBS767]
gi|49656625|emb|CAG89314.1| DEHA2F13618p [Debaryomyces hansenii]
Length = 232
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 8/204 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR------SY 60
I PSILA+DF+ LG + +GA +H DVMDG FVPNIS G +I SLR
Sbjct: 6 IAPSILASDFANLGCNCHRMYDSGADWLHIDVMDGHFVPNISMGPPIIDSLRKEIPRSET 65
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FDCH+M+S + + IA AG D TFH ES+ ++ I + G K A+ P
Sbjct: 66 KASFFDCHMMVSEPEKWVPEIAKAGGDQYTFHYESTKDPVALVKLIKSHGMKAACAVKPG 125
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +L + +++DM L+MTV PGFGGQ+ + +PK+ + + ++++VDGG+
Sbjct: 126 TPVDVLYPLAEDLDMALVMTVEPGFGGQKFMPEMMPKVESLRQKFPE--LNIQVDGGLGH 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
I + +AGA+++V G++ F +
Sbjct: 184 ETIPAAAEAGANVIVAGTAVFKAQ 207
>gi|33861323|ref|NP_892884.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633900|emb|CAE19225.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 251
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 127/208 (61%), Gaps = 11/208 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G + ++ +AG +I FDVMDG FVPN++FG ++I + R Y +
Sbjct: 16 IQIIPSVLPADWANMGACVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYCEVP 75
Query: 65 FDCHLMISSIDSHINIIA--------DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S + + A + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLEAYVKATKGPNGEPGVVIAHAEANVHLHRVLGKIRDLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+NP TP ++E+++D +D +L+MTVNPGFGGQ I + + KIR+ + + +++++ +EV
Sbjct: 136 LNPHTPFEMIENIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIRKIRNFVIEKNLNVDIEV 195
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFF 201
DGG+ + I +AGA+ + GS F
Sbjct: 196 DGGIKANWTISQCAEAGANCFIAGSGMF 223
>gi|291276270|ref|YP_003516042.1| ribulose-phosphate 3-epimerase [Helicobacter mustelae 12198]
gi|290963464|emb|CBG39294.1| ribulose-phosphate 3-epimerase [Helicobacter mustelae 12198]
Length = 212
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+A+F RLGEEI + AGA +H DVMDG FVPN++FG V+ + Y+ D
Sbjct: 3 VAPSLLSANFMRLGEEIRALCDAGADFLHIDVMDGHFVPNLTFGPVVLEQIAKYASKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ + + A + ++ H E H+ R + +I G + V +NP + L
Sbjct: 63 VHLMVENVSFFVELFAPLKPEFMSVHIEEVKHLHRVIESIRKHGIRPCVVLNPHSSEQDL 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ ++++IDM+L+M+VNPGFGGQ+ I S K + I + + +EVDGGV +NI
Sbjct: 123 KYILEDIDMVLLMSVNPGFGGQKFIPSVCKKAKMLHHRIQEYNPKCLIEVDGGVNEKNIS 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L ++ D++V GS FNQ Y K ++ L+
Sbjct: 183 LLKESMVDVVVAGSYIFNQS---DYKKAVDSLR 212
>gi|86148973|ref|ZP_01067205.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597041|ref|ZP_01100277.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562106|ref|YP_002343885.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85840331|gb|EAQ57588.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190730|gb|EAQ94703.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359812|emb|CAL34599.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284925718|gb|ADC28070.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315928221|gb|EFV07538.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930012|gb|EFV09155.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
305]
Length = 215
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ I+FH ES H R I + G + +NP TP+
Sbjct: 61 LDVHLMVKDVSKFVDLFISLKPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ + +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLIHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L ++GAD+LV GS F+ Y ++ LK
Sbjct: 181 ASDLEESGADILVAGSYIFSSN---DYKTAISSLK 212
>gi|113953349|ref|YP_730888.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9311]
gi|113880700|gb|ABI45658.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9311]
Length = 244
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 136/227 (59%), Gaps = 14/227 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G+ + ++ AG +I FDVMDG FVPN++FG ++I++ R Y +
Sbjct: 8 IQIIPSVLPADWAAMGQCVKDLEDAGVDRIQFDVMDGNFVPNLTFGPELIKACRRYCNVP 67
Query: 65 FDCHLMISS------IDSHINIIADAGCD--IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S ++ ++ A + ++ H E++ H+ R L I +G VA
Sbjct: 68 FETQLMVSQYNCETMLEEYVEATKGANGEPGVVIAHVEANTHLHRILGRIRQLGGSPSVA 127
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEV 174
+NP TP+ +++DV+D +D +L+MTVNPGFGGQ I + + KI + + I +R+ + +EV
Sbjct: 128 LNPHTPMEMVKDVLDLVDHVLVMTVNPGFGGQAYIPTMLNKISELRKNIVERNLDVDIEV 187
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
DGG+ + I AGA+ + GS F S + +DL++ A
Sbjct: 188 DGGIKANWTISQCCAAGANCFIAGSGMFAYP---SLKEGCDDLRRVA 231
>gi|320580104|gb|EFW94327.1| D-ribulose-5-phosphate 3-epimerase [Pichia angusta DL-1]
Length = 233
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 10/204 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY------ 60
I PS+LA DF++LG E + K A +H DVMDG FVPN++ G +I SLR
Sbjct: 6 IAPSVLAGDFAQLGCECHRMFKCNADWVHLDVMDGHFVPNLTMGPPIISSLRKAVPRDES 65
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
FDCH+M+++ + + IADAG D TFH E++ ++ I G K AI
Sbjct: 66 QPGKFFFDCHMMVANPEQWVPEIADAGGDQYTFHYEATKDPVGLVKLIKKHGMKAACAIK 125
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TPV +L + + +DM L+MTV PGFGGQ + +PK+ +A ++++VDGG+
Sbjct: 126 PGTPVDVLYPLAEHLDMALVMTVEPGFGGQSFMADMMPKVENLRAKY--PHLNIQVDGGL 183
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
+ I + +AGA+++V G+S F
Sbjct: 184 GPKTIPAAAKAGANVIVAGTSVFK 207
>gi|213402011|ref|XP_002171778.1| ribulose-phosphate 3-epimerase [Schizosaccharomyces japonicus
yFS275]
gi|211999825|gb|EEB05485.1| ribulose-phosphate 3-epimerase [Schizosaccharomyces japonicus
yFS275]
Length = 230
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS--- 59
P +I PS+LA DFS L +E+ + G+ +H D+MD FVP ++ G V++ +R+
Sbjct: 2 PEPKIAPSLLAGDFSNLQKEVVRMVDYGSDWLHVDIMDSQFVPQLTIGPVVVKCMRNGVP 61
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ FDCH+M+ + + ++ ADAG ++ FH E++ + HA G + G AI P
Sbjct: 62 KEKAFFDCHMMVMNPERWVDDFADAGANLFCFHYEATEKHMEVIERAHARGMRVGCAIKP 121
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV +E ++ +DM+L+MTV PG GGQ + +PK+ + + + +EVDGGV+
Sbjct: 122 KTPVEAIEPLVAHLDMVLVMTVEPGKGGQSFMPECLPKVEYLRQRYPE--LDIEVDGGVS 179
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
+ I S AGA+++V G++ F
Sbjct: 180 PKTIDSAANAGANVIVAGTAVF 201
>gi|328957784|ref|YP_004375170.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. 17-4]
gi|328674108|gb|AEB30154.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. 17-4]
Length = 218
Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS++ ADF L +E++ + +AGA H D+MDG +VPN G +R + + D
Sbjct: 5 ICPSMMCADFGSLKDEVTKLDQAGADVFHIDIMDGVYVPNYGMGLQDFEFIRKATKKLVD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + ++ D G DII FHPE+ H R+L I A GKK G+AINP T + +
Sbjct: 65 VHLMVKNPADYVEKFIDMGADIIYFHPETDQHPARTLDKIRAKGKKAGIAINPGTSIETI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ D +L+MTVNPGF GQ+ ++ KI++ ++ + L VDG +++ +++L
Sbjct: 125 QELLYLADYVLVMTVNPGFAGQKYLDYVDHKIKKLSSMKNEYDFELVVDGAISNERVETL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G V+G+S K E SY + + LK
Sbjct: 185 SALGVKGFVLGTSALFGKDE-SYQEIIKSLK 214
>gi|41386741|ref|NP_958469.1| ribulose-phosphate 3-epimerase [Danio rerio]
gi|37747988|gb|AAH59555.1| Ribulose-5-phosphate-3-epimerase [Danio rerio]
gi|220941752|emb|CAX15453.1| ribulose-5-phosphate-3-epimerase [Danio rerio]
Length = 228
Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL++D S+LG E + + GA +H DVMDG FVPNI+FG ++ LRS
Sbjct: 1 MAYTAKIGPSILSSDLSQLGRECERMMECGADYLHLDVMDGHFVPNITFGHPMVECLRSC 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 IGPDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLEATSNPGNLIKEIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEELAPWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRGQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+I +AGA+++V GS+
Sbjct: 179 GPDSIHRCAEAGANMIVSGSA 199
>gi|72025733|ref|XP_792810.1| PREDICTED: similar to LOC494647 protein [Strongylocentrotus
purpuratus]
gi|115939134|ref|XP_001195815.1| PREDICTED: similar to LOC494647 protein [Strongylocentrotus
purpuratus]
Length = 230
Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 126/197 (63%), Gaps = 3/197 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+I PSIL +D S L +E + +GA +H DVMDG FVPN++FG V++ LR +++
Sbjct: 9 KIGPSILNSDLSALADECHRMMDSGADYLHLDVMDGHFVPNLTFGHPVVKCLREKVTNAF 68
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ S + I ++ AG + TFH E++ + +R I G K G+A+ P TP+
Sbjct: 69 FDMHMMVLSPEKWIEPMSSAGANQYTFHVEATDDPKMVIRHIKEAGMKVGIAMKPGTPID 128
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++ ++E++M+L+MTV PGFGGQ+ + + K+++ + + +S+ +EVDGGV I
Sbjct: 129 VVLPYVEEVNMVLVMTVEPGFGGQKFMGDMMTKVKKLREMY--KSLDIEVDGGVGLSTID 186
Query: 185 SLVQAGADLLVVGSSFF 201
++ +AGA+++V GS+
Sbjct: 187 AVAEAGANMIVSGSAIM 203
>gi|164428399|ref|XP_963721.2| ribulose-phosphate 3-epimerase [Neurospora crassa OR74A]
gi|157072132|gb|EAA34485.2| ribulose-phosphate 3-epimerase [Neurospora crassa OR74A]
Length = 251
Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 125/235 (53%), Gaps = 35/235 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M P I PSIL+ADF+ LG + S GA +H D+MDG FVPN+++G ++ +R
Sbjct: 1 MAPKAIIAPSILSADFANLGHDCSKTISQGADWLHVDIMDGHFVPNLTWGPPIVAKIRGH 60
Query: 59 ------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-------SPHIRRSLRT 105
+Y FDCH+MI+ + AGCD+ FH E+ SP + +T
Sbjct: 61 VEKPTEAYGKGTFDCHMMIAEPKKWVKEFKKAGCDLYCFHYEAAFSTAAESPEAKSDKKT 120
Query: 106 --------IHAMGKKTGVAINPETPVAIL------EDVIDEIDMILIMTVNPGFGGQQLI 151
IH G G+A+ P T V +L ED + DM+LIMTV PGFGGQ+ +
Sbjct: 121 SPKELIKYIHDQGMLAGIALKPATSVDVLWEILESEDPKERPDMVLIMTVEPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
S +PK+++ + KR +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 ASELPKVQELR----KRYPELNIEVDGGLGPSTIDQAADAGANVIVAGSAVFGAQ 231
>gi|91202752|emb|CAJ72391.1| strongly similar to D-ribulose-5-phosphate 3-epimerase [Candidatus
Kuenenia stuttgartiensis]
Length = 232
Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 3/226 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I SILAA+ R EEI I AG IH DVMDG FVPNI+ G ++ +R
Sbjct: 1 MRNKIKISASILAANPMRFEEEIKRIEAAGIDLIHIDVMDGHFVPNITIGPFIVAGIRRI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
++ D HLMI + ++ A A G IITFH E+ + + + I + G K G+++N
Sbjct: 61 TNIPLDIHLMIEHPERYVEAFAGAAEGNGIITFHIETVKNPKEIISLIKSTGMKVGISLN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TPV ++E+ +D++DM L+M+VNPGF GQ+ I +PKI + + + + ++VDGG+
Sbjct: 121 PGTPVEMIENFLDQVDMALVMSVNPGFAGQKFIPIALPKIARLRDKAPDK-MDIQVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
T NI +V+ GA+++V S+ F + K L + + + D
Sbjct: 180 TPDNISQVVKQGANVIVAASAIFKTSDPGNAIKSLKQIAEQTMEKD 225
>gi|302779992|ref|XP_002971771.1| hypothetical protein SELMODRAFT_231837 [Selaginella moellendorffii]
gi|300160903|gb|EFJ27520.1| hypothetical protein SELMODRAFT_231837 [Selaginella moellendorffii]
Length = 223
Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 124/201 (61%), Gaps = 5/201 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 2 SAKIAPSMLSSDFANLAAEAQRMLDCGADWLHMDIMDGHFVPNLTIGAPVIQSLRRHTSA 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ ++ +A AG TFH E+S + R + + G + GV + P TP
Sbjct: 62 YLDCHLMVTNPLDYVEPLAKAGASGFTFHIEASRDNWDRVSKKVKESGMRVGVCLKPGTP 121
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V + ++D ++D++LIMTV PGFGGQ+ I T+ K++ ++ S+ +EVDGG+
Sbjct: 122 VEEVFPLVDSGDVDLVLIMTVEPGFGGQKFIPETMSKVKALRSRY--PSLDIEVDGGLGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
I+ AGA+ +V GSS F
Sbjct: 180 STIQQAADAGANCIVAGSSVF 200
>gi|282889776|ref|ZP_06298315.1| hypothetical protein pah_c004o154 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500350|gb|EFB42630.1| hypothetical protein pah_c004o154 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 237
Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 123/218 (56%), Gaps = 19/218 (8%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSIL+ADF R+ +E + AGA IH D+MDG FVPN++ G ++ ++ +
Sbjct: 5 SLKIAPSILSADFGRMADEALRLEDAGADFIHIDIMDGNFVPNLTMGPKMVAAINRATSV 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +I +AG D++TFH E++ + +L I K G+A +PET +
Sbjct: 65 FLDVHLMVYHPFDYIERFVEAGADMLTFHFEATEDVEETLAYIRKCNIKAGLAFSPETSL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS------------ 171
+++ +D+ DMIL+MTVNPGFGGQ+ + + K+ + + K +I
Sbjct: 125 SMIPKYLDKCDMILLMTVNPGFGGQEFMPEVLEKVEFTRDICNKLNICEGGKYAPEGADP 184
Query: 172 -------LEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+EVDGG+ + + V AGA++LV GS FN
Sbjct: 185 ATIKPFLIEVDGGINPQTAELCVNAGANVLVSGSYLFN 222
>gi|322699171|gb|EFY90935.1| ribulose-phosphate 3-epimerase [Metarhizium acridum CQMa 102]
Length = 276
Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 130/258 (50%), Gaps = 56/258 (21%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF++LGEE + GA +H D+MDG FVPNI+FGA V+ +R +
Sbjct: 1 MTPPAIIAPSILSADFAQLGEECARTMDQGADWLHVDIMDGHFVPNITFGAAVVAKIRGH 60
Query: 61 SDS--------VFDCHLMISSIDSHINIIADAGCDIITFH-----------PESSPHIRR 101
D FDCH+MI+ + AGCD+ FH PE + +
Sbjct: 61 VDKPTECQGRGTFDCHMMIAEPKKWVKEFKKAGCDLYCFHYEAAFSTAAESPEQTSDKKT 120
Query: 102 S----LRTIHAMGKKTGVAINPETPVAILEDVIDEID----------------------- 134
S +R IH G G+AI P+T V +L D+++ D
Sbjct: 121 SPKELIRYIHDNGMLAGIAIKPDTSVDVLWDILETADAKEMPDVSCNPTTMRVHISPGEL 180
Query: 135 --------MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
M+L+MTV PGFGGQ+ + S +PK++ +A + +++EVDGG+ I
Sbjct: 181 VIFLLTRQMVLVMTVYPGFGGQKFMASELPKVQALRAKYPE--LNIEVDGGLGPGTIDQA 238
Query: 187 VQAGADLLVVGSSFFNQK 204
AGA+++V GS+ F K
Sbjct: 239 ADAGANVIVAGSAVFGAK 256
>gi|328767260|gb|EGF77310.1| hypothetical protein BATDEDRAFT_13975 [Batrachochytrium
dendrobatidis JAM81]
Length = 222
Score = 154 bits (389), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 126/204 (61%), Gaps = 5/204 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVM---DGCFVPNISFGADVIRSLRS 59
P +I PS+L++DF+ L E + AGA +H DVM DG FVPN++ GA +++ LR
Sbjct: 2 PVAKIAPSMLSSDFACLASEAKRMVDAGADYLHMDVMVSLDGHFVPNLTLGAPIVKCLRK 61
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++D+ DCHLM+++ + ++ A AG + TFH E++ + + + I A G K G+++ P
Sbjct: 62 HTDAFLDCHLMVTNPEQWVDSFAAAGASLFTFHIEATDNASKLIDRIQATGMKVGISLKP 121
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+T + + D+I +D +LIMTV PGFGGQ+++ + K+ ++ ++ ++VDGG+
Sbjct: 122 KTEIETIIDLIPRLDQVLIMTVEPGFGGQKMMPECLEKVAALRSKF--PNLDIQVDGGID 179
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
NI +AGA+++V G+ F
Sbjct: 180 IHNIGLAAKAGANVIVSGTGIFGH 203
>gi|227875401|ref|ZP_03993542.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris ATCC 35243]
gi|227843955|gb|EEJ54123.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris ATCC 35243]
Length = 218
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L D +++ I A +H D+MD FVPN+++G +++ +
Sbjct: 3 IKIYPSVLNCDQMHFANQLNAIDSADG--VHLDIMDNHFVPNLTWGLPTAQAVVKSTTLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D A AGC I++FH E++ R+ I +G K G+A+NP TPV+
Sbjct: 61 VDAHLMIDNPDRWAPEYAKAGCSIVSFHFEAAKAPLRTAEAIRELGAKPGIALNPATPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+L D++ D +L+M+V PGFGGQ I PKI++ + +I + S +EVDGG++ +N
Sbjct: 121 VLADILPRFDQVLLMSVEPGFGGQGFIPEVYPKIKRLRKMIEEARLSTDIEVDGGISDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I +V+AGA+++V GS F ++ + AK
Sbjct: 181 IAKVVEAGANVIVAGSFVFKREPARAIAK 209
>gi|303325491|ref|ZP_07355934.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. 3_1_syn3]
gi|302863407|gb|EFL86338.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. 3_1_syn3]
Length = 240
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 137/217 (63%), Gaps = 6/217 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADFSRL EE++ + AG +H DVMDG FVPNI+FG +I++LR +S FD
Sbjct: 3 LSPSLLSADFSRLAEELAALEAAGVTWLHLDVMDGAFVPNITFGPPLIKALRPHSGLFFD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ +AG D++ H E+ H +R+L I +G K G+A+NP T ++
Sbjct: 63 VHLMVEEPARYLRDFKEAGADLLVIHAEADRHAQRTLTEIRKLGLKAGLALNPGTDLSAA 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSRNI 183
+ ++D++L+M+VNPGF GQ I T KIR A+AL+ + ++ ++VDGG N+
Sbjct: 123 RWLAPDLDLLLLMSVNPGFSGQAFIPQTYEKIRAARALLAEAGVAGALVQVDGGACPENV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+L+ AGAD+LV GS+FF K Y RL K+A
Sbjct: 183 AALLDAGADVLVSGSAFFGHK---PYDARLAAFMKAA 216
>gi|229820541|ref|YP_002882067.1| ribulose-phosphate 3-epimerase [Beutenbergia cavernae DSM 12333]
gi|229566454|gb|ACQ80305.1| ribulose-phosphate 3-epimerase [Beutenbergia cavernae DSM 12333]
Length = 221
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL +DFS L E++ I AGA H DVMD FVPN++ G V+ S+ S
Sbjct: 3 ILITPSILNSDFSDLRGELAKI--AGADYAHVDVMDNHFVPNLTLGLPVVESIVRASPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D A+AG +TFH E++ R R I + G + G+A+ P TP+
Sbjct: 61 VDAHLMITDPDRWAPAYAEAGAGSVTFHAEAAAAPVRLAREIRSQGARAGLALRPATPIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
D++ E+DM+L+MTV PGFGGQ + S +PKIR+ + + + ++VDGGV+
Sbjct: 121 PYVDLLAEVDMVLVMTVEPGFGGQPFLTSMLPKIRRTRDAVAAAGLDVWVQVDGGVSRST 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I+ AGA++ V GS+ + + + L DL A
Sbjct: 181 IEQAANAGANVFVAGSAVYAAEDAAAEVSTLRDLADGAF 219
>gi|238883189|gb|EEQ46827.1| ribulose-phosphate 3-epimerase [Candida albicans WO-1]
Length = 230
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 117/203 (57%), Gaps = 9/203 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS-- 63
I PSILAADF+ LG + G + +H DVMDG FVPNIS G +I SLR
Sbjct: 6 IAPSILAADFANLGCNCKRVVDTGDVEWLHLDVMDGHFVPNISLGPPIISSLRKQFPREG 65
Query: 64 ----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
VFDCH+M+S D I IA AG D TFH E++ R ++ I G K +AI P
Sbjct: 66 DKPIVFDCHMMVSEPDEWIEEIAKAGGDSYTFHFEATKDPARVIKKIKEHGLKAAMAIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV + +++DM+L+MTV PGFGGQ+ + +PK+ + ++ ++VDGG+
Sbjct: 126 KTPVEEVFPYAEDLDMVLVMTVEPGFGGQKFMPDMMPKVETLREKY--PNLDVQVDGGLG 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
I+ AGA+++V G+S F
Sbjct: 184 KDTIQPAADAGANVIVAGTSVFK 206
>gi|187251153|ref|YP_001875635.1| ribulose-phosphate 3-epimerase [Elusimicrobium minutum Pei191]
gi|186971313|gb|ACC98298.1| Ribulose-phosphate 3-epimerase [Elusimicrobium minutum Pei191]
Length = 226
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 123/216 (56%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+AD RLGE++ + AGA +H D+MDG FVPN+SFG V +SL + S D
Sbjct: 13 VAPSVLSADMWRLGEQVLEVASAGADWLHLDIMDGHFVPNLSFGPAVCKSLSAKSPLPLD 72
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + I A AG D IT H ES + L++I +G G++I P+T +
Sbjct: 73 VHLMVKYPGAFIKPFAKAGADNITVHIESEDNTLDMLKSIKELGLSAGISIKPDTDAQKI 132
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIES---TIPKIRQAKALIGKRSIS-LEVDGGVTSRN 182
++ D+IL+MTV PGFGGQ +E I K+RQ L K+ ++ +EVDGG+
Sbjct: 133 IPFLEYTDLILVMTVQPGFGGQAFMEEGRQNIIKVRQ--ILKDKKCLAWVEVDGGINMET 190
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K V AGAD LV G++ F K K L D+ K
Sbjct: 191 AKPAVIAGADALVAGNAVFAAKDPGQAVKDLKDIIK 226
>gi|291533255|emb|CBL06368.1| ribulose-phosphate 3-epimerase [Megamonas hypermegale ART12/1]
Length = 224
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ + PSILAADFS L +++ + ++G K +H DVMDG FV NI+FG D+I+ LR
Sbjct: 2 MKMTVVLSPSILAADFSCLADDVKRLEQSGIKDLHLDVMDGHFVSNITFGIDLIKHLRPK 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLM+++ D +N + +AG + +T H E+ H+ ++ TI+ +G + GV +NP
Sbjct: 62 TKMNFDAHLMVTNPDVLLNGLKEAGVNSVTVHVEACKHLYHTVETINKLGMQGGVVLNPS 121
Query: 121 TPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
T L+ + + I +L+M+V PGFGGQ + + KI+ + + + ++VDG
Sbjct: 122 TNFESLKYMAENNIIKKVLVMSVEPGFGGQAYLPMSTKKIKDLANWRDENNYNFIIQVDG 181
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
G+ NI+++V AGA +V+GSS F + K + D +K
Sbjct: 182 GINLNNIQTVVDAGATDIVIGSSIFKHR---ELEKNVADFRK 220
>gi|319937492|ref|ZP_08011897.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. 29_1]
gi|319807332|gb|EFW03941.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. 29_1]
Length = 214
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 3/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+A+F+ L +++ I GA IH+DVMDG FVPNISFG +++ + +D
Sbjct: 2 VKVAPSVLSANFAELKKDLDMIKACGADWIHYDVMDGHFVPNISFGYSILKDISKVTDMY 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAINPET 121
D HLMIS +++ AG +ITFH E+ + R ++ I G G++I P T
Sbjct: 62 LDVHLMISHPMKYVDEFIKAGASLITFHVEAMANETSTRELIQHIQNQGIHVGLSIKPTT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V +E +D++D++L+M+V PGFGGQ I KIR+ +L R +EVDGG+ +
Sbjct: 122 QVDEIEKYLDDVDLVLVMSVEPGFGGQSFQHQAIDKIRKLHSLKNGRHFIIEVDGGINAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
+AG D+LV GS F
Sbjct: 182 TGLLCKEAGVDVLVAGSYVFQ 202
>gi|19114917|ref|NP_594005.1| ribulose phosphate 3-epimerase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|51701874|sp|O14105|RPE_SCHPO RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|2388956|emb|CAB11689.1| ribulose phosphate 3-epimerase (predicted) [Schizosaccharomyces
pombe]
Length = 228
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 128/204 (62%), Gaps = 9/204 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY---SD 62
+I PS+LA DF+ L +E+ + K G+ +H DVMD FVPN++ G V++++R++ +
Sbjct: 5 KIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEE 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ FDCHLM+ + +I+ +ADAG + FH E++ + H G G A+ P+TP
Sbjct: 65 AFFDCHLMVIEPERYIDQLADAGASLFCFHYEATEKHEEIISRAHEKGMLVGCALKPKTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTS 180
V ++ ++++DM+L+MTV PG GGQ + +PK+ + K+ ++++EVDGG++
Sbjct: 125 VEVILPFVEKLDMVLVMTVEPGKGGQSFMPECLPKVE----FLRKKYPTLNVEVDGGLSL 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ + + AGA+++V G++ F+ +
Sbjct: 181 KTVDAAADAGANVIVAGTAVFHAQ 204
>gi|307720493|ref|YP_003891633.1| ribulose-5-phosphate 3-epimerase [Sulfurimonas autotrophica DSM
16294]
gi|306978586|gb|ADN08621.1| ribulose-5-phosphate 3-epimerase [Sulfurimonas autotrophica DSM
16294]
Length = 213
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+Q+ PSIL+ADF L ++ I AG +H D+MDG FVPN++ G V+ ++ +
Sbjct: 1 MQVAPSILSADFGNLARDVQEICDAGCDLVHVDIMDGHFVPNLTIGPVVVSAIAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A I+FH E H R ++ I ++G K + +NP T
Sbjct: 61 LDIHLMVENNTFFVELFAPLKPQYISFHIEEEKHPHRLIQKIRSLGIKPCIVLNPNTIPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE +++++DM+L+M+VNPGFGGQ IES +PK ++ + + + ++VDGGV+ +N
Sbjct: 121 ELEYILEDLDMVLLMSVNPGFGGQTFIESVLPKAKKLNEMRKRLNPECLIQVDGGVSDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +L +AG D++V GS F + K L
Sbjct: 181 IHALKEAGVDVVVAGSYVFKHEDRAKAIKSLQ 212
>gi|316975563|gb|EFV58983.1| ribulose-phosphate 3-epimerase [Trichinella spiralis]
Length = 232
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--S 61
+ +I PSIL +D + L E + KAGA +H DVMDG FVPNIS G VI+ LR +
Sbjct: 6 TCRIGPSILNSDLATLSLECDRLLKAGADFLHLDVMDGHFVPNISIGPAVIQCLRKHIPR 65
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+FD HLM+ + I +A+AG D TFH E+ ++ + I A G K G+AI P T
Sbjct: 66 PVIFDVHLMVDRPEQWIMPMAEAGTDYFTFHLEACTNVDEVITEIKATGMKCGIAIKPNT 125
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P+ + + +DM+L+MTV PGFGGQ + + K+R+ + K + +EVDGGV
Sbjct: 126 PLEDVLPYLPRVDMLLVMTVEPGFGGQSFLLEMLEKVRKCRMQFPK--LDIEVDGGVGPA 183
Query: 182 NIKSLVQAGADLLVVGSS------------FFNQKGEISYAKRL 213
NI +AGA+++V G++ F Q+G + ++
Sbjct: 184 NINQCAEAGANVIVSGTAIVKSNDPESTMNFMRQRGNMVLRQKF 227
>gi|289644956|ref|ZP_06476997.1| ribulose-phosphate 3-epimerase [Frankia symbiont of Datisca
glomerata]
gi|289505229|gb|EFD26287.1| ribulose-phosphate 3-epimerase [Frankia symbiont of Datisca
glomerata]
Length = 232
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 3/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PS+LAADF R+ + + + A +H DVMD FVPN++F D + +LR+ +
Sbjct: 3 TAQIYPSLLAADFGRVADA-ARAVEGHADWLHVDVMDYHFVPNLAFAPDTVTALRTVTTI 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E+ + R+ I A G +TG+A+ P TPV
Sbjct: 62 PLDCHLMIDDPDRWAAGYAERGAANVTIHAEAVRDLPRTTDAIRAAGARTGLAVKPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D++L+MT+ PGFGGQ+ + +PKI A+ L+ R + L++DGGV +
Sbjct: 122 ERYVDDLHRFDLLLLMTIEPGFGGQKFMNEVLPKIEAARRLLDDRGLDLWLQIDGGVNAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ +AG D+ V G++ +
Sbjct: 182 TIERAARAGVDVFVAGTAVYG 202
>gi|195581258|ref|XP_002080451.1| GD10239 [Drosophila simulans]
gi|194192460|gb|EDX06036.1| GD10239 [Drosophila simulans]
Length = 221
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR+ +
Sbjct: 6 KIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKIKTAF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+ + + I +ADAG ++ TFH E + R R + G K G+AI P T V
Sbjct: 66 FETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRQVQESGMKVGLAIKPGTEVQ 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE + D++L+MTV PGFGGQ + +PK++ + ++ +EVDGGV + I
Sbjct: 126 DLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRE--NYPNLDIEVDGGVGPKTIH 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AGA+++V G++ + K L D+ S L
Sbjct: 184 CCAEAGANMIVSGTAVVGASDQSQVIKELRDVVHSYL 220
>gi|302760795|ref|XP_002963820.1| hypothetical protein SELMODRAFT_166200 [Selaginella moellendorffii]
gi|300169088|gb|EFJ35691.1| hypothetical protein SELMODRAFT_166200 [Selaginella moellendorffii]
Length = 223
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 124/201 (61%), Gaps = 5/201 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 2 SAKIAPSMLSSDFANLAAEAQRMLDCGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTSA 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ ++ +A AG TFH E+S + R + + G + GV + P TP
Sbjct: 62 YLDCHLMVTNPLDYVEPLAKAGASGFTFHIEASRDNWDRVSKKVKESGMRVGVCLKPGTP 121
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V + ++D ++D++LIMTV PGFGGQ+ + T+ K++ ++ S+ +EVDGG+
Sbjct: 122 VEEVFPLVDSGDVDLVLIMTVEPGFGGQKFMPETMSKVKALRSRY--PSLDIEVDGGLGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
I+ AGA+ +V GSS F
Sbjct: 180 STIQQAADAGANCIVAGSSVF 200
>gi|226306506|ref|YP_002766466.1| ribulose-5-phosphate 3-epimerase [Rhodococcus erythropolis PR4]
gi|226185623|dbj|BAH33727.1| ribulose-5-phosphate 3-epimerase [Rhodococcus erythropolis PR4]
Length = 227
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+ADF+RL +E + ++ G+ +H DVMD FVPN++ G V+ SL +D
Sbjct: 3 SPMIAPSILSADFARLADEATAVS--GSDWLHVDVMDAHFVPNLTLGLPVVESLLKATDI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + + A+AG +TFH E++ R R I A G K G++I P TP+
Sbjct: 61 PLDCHLMIENPERWAPPYAEAGAYNVTFHAEATDDPRSVARDIRAAGAKAGLSIKPGTPI 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
+++ + D +LIM+V PGFGGQ + + K R + L+ G+ ++ +E+DGG+ +
Sbjct: 121 DDYLEILKDFDTLLIMSVEPGFGGQSFMPQVLDKARAVRKLVDSGELTLLVEIDGGINAS 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AG D V GS+ + ++L SA
Sbjct: 181 TIEQAAEAGIDCFVAGSAVYGASDPGEAVRKLRAQAASA 219
>gi|195332161|ref|XP_002032767.1| GM20778 [Drosophila sechellia]
gi|194124737|gb|EDW46780.1| GM20778 [Drosophila sechellia]
Length = 221
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR+ +
Sbjct: 6 KIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKIKTAF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+ + + I +ADAG ++ TFH E + R R + G K G+AI P T V
Sbjct: 66 FETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRKVQESGMKVGLAIKPGTEVQ 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE + D++L+MTV PGFGGQ + +PK++ + ++ +EVDGGV + I
Sbjct: 126 DLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRE--NYPNLDIEVDGGVGPKTIH 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AGA+++V G++ + K L D+ S L
Sbjct: 184 CCAEAGANMIVSGTAVVGASDQSQVIKELRDVVHSYL 220
>gi|33240289|ref|NP_875231.1| Pentose-5-phosphate-3-epimerase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237816|gb|AAP99883.1| Pentose-5-phosphate-3-epimerase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 247
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G+ + ++ +AG +I FDVMDG FVPN++FG ++I + R Y +
Sbjct: 12 IQIIPSVLPADWANMGQCVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCNVP 71
Query: 65 FDCHLMISSIDSHINIIA--------DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S + + A + ++ H E++ H+ R L I +G VA
Sbjct: 72 FETQLMVSQYNCETMLEAYVEASKGPNGEPGVVIAHVEANVHLHRILGKIRQLGGSPSVA 131
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEV 174
+NP TP+ +++DV+D +D +L+MTVNPGFGGQ I + + KI+ + +I I +EV
Sbjct: 132 LNPHTPMEMVKDVLDMVDHVLVMTVNPGFGGQAYIPTMLNKIKSLREVIVENNYDIDIEV 191
Query: 175 DGGVTS-RNIKSLVQAGADLLVVGSSFF 201
DGG+ + I AGA+ + GS F
Sbjct: 192 DGGIKADWTISQCCAAGANCFIAGSGMF 219
>gi|325120554|emb|CBZ56108.1| hypothetical protein NCLIV_065340 [Neospora caninum Liverpool]
Length = 230
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 9/205 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PS+LA+D S L E + AG +H D+MDG FVPN++ G V+++LR + S F
Sbjct: 9 ICPSVLASDLSSLASEAKRMVDAGCDWLHLDIMDGHFVPNLTIGPGVVKALRGHVKSTFF 68
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS----PHIRRSLRTIHAMGKKTGVAINPET 121
D HLM++ + + ADAG + ITFH E+ + I +G K G+AI P T
Sbjct: 69 DVHLMVTDPEKWVQPFADAGANSITFHWEAVGGDLAKAEALAKRIRELGIKAGLAIKPAT 128
Query: 122 PVAILEDVI--DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+A L D + D DM+L+MTV PGFGGQ+ ++ + K+R A++L + ++++VDGG+
Sbjct: 129 KLADLGDALAGDRFDMLLVMTVEPGFGGQKFMQDMLDKVRVARSLFPR--LNIQVDGGLD 186
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK 204
+KS AGA+++V G+S F +
Sbjct: 187 GETVKSAAFAGANVIVAGTSIFKSE 211
>gi|308804988|ref|XP_003079806.1| ribulose-phosphate 3-epimerase (IC) [Ostreococcus tauri]
gi|116058263|emb|CAL53452.1| ribulose-phosphate 3-epimerase (IC) [Ostreococcus tauri]
Length = 460
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 132/221 (59%), Gaps = 11/221 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVF 65
I PS+L+ DF+R+ +E + GA +H DVMDG FVPN++FGA VI +LR + D+ F
Sbjct: 242 ISPSLLSCDFARMADESKKVIACGADWLHLDVMDGHFVPNLTFGAPVIAALRPHVPDAYF 301
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS---LRTIHAMGKKTGVAINPETP 122
D HLM+++ + ++ +A AG ++ T+H E++ + R I A G GVAI P T
Sbjct: 302 DVHLMVTNPEDYVEPMAKAGANMFTYHAETTKTAGEAAELCRKIRASGMHVGVAIKPATK 361
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
++ ++DE +DM+L+MTV PGFGGQ+ K++ + + ++VDGG+++
Sbjct: 362 AEVVFGLVDEGAVDMVLVMTVEPGFGGQKFNPECCAKVKTLRERFP--DLKIQVDGGLSA 419
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA+++V GSS F G + + ++ L++ L
Sbjct: 420 STIDVAAEAGANVIVAGSSVF---GSADWKQAIDVLREGVL 457
>gi|269956517|ref|YP_003326306.1| ribulose-phosphate 3-epimerase [Xylanimonas cellulosilytica DSM
15894]
gi|269305198|gb|ACZ30748.1| ribulose-phosphate 3-epimerase [Xylanimonas cellulosilytica DSM
15894]
Length = 220
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 120/214 (56%), Gaps = 7/214 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L ++ I A H DVMD FVPN++ G V L + S D
Sbjct: 5 INPSILSADFANLERDLHAIKSA--DYAHVDVMDNHFVPNLTLGLPVFDRLAAISPVPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AG +TFH E++ R R + +G + GVA+ P TPV
Sbjct: 63 AHLMIDDPDRWAPQFAEAGAASVTFHAEAAQAPVRLARELRRLGARAGVALRPATPVEPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
D++ EIDMIL+MTV PGFGGQ I+ T+PKIR+A+ I + + ++VDGGV+ I+
Sbjct: 123 LDLLAEIDMILVMTVEPGFGGQTFIDGTLPKIRRARKAISESGLDVWVQVDGGVSRTTIE 182
Query: 185 SLVQAGADLLVVGSSFFNQ---KGEISYAKRLND 215
AGA++ V GS+ + EI + L D
Sbjct: 183 RAADAGANVFVAGSAVYGADDIPAEIDALRALAD 216
>gi|260951217|ref|XP_002619905.1| hypothetical protein CLUG_01064 [Clavispora lusitaniae ATCC 42720]
gi|238847477|gb|EEQ36941.1| hypothetical protein CLUG_01064 [Clavispora lusitaniae ATCC 42720]
Length = 231
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 117/201 (58%), Gaps = 7/201 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-----YS 61
I PSILA+DF+ LG + +GA +H DVMDG FVPNIS G +I SLR
Sbjct: 6 IAPSILASDFANLGCNCHKMYDSGADWLHIDVMDGHFVPNISLGPPIITSLRKEIPRKAE 65
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ FDCH+M+S + + IA AG D TFH ES+ ++ I G K AI P T
Sbjct: 66 KTFFDCHMMVSEPEKWVPEIAKAGGDQYTFHYESTKDPLALIKLIKENGMKAACAIKPGT 125
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V +L ++ E+DM L+MTV PGFGGQ+ + +PK+ + + ++++VDGG+
Sbjct: 126 SVDVLYEIGSELDMALVMTVEPGFGGQKFMADMMPKVEKLRTKF--PHLNIQVDGGLGKE 183
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
+ + +AGA+++V G+S F
Sbjct: 184 TVPAAAEAGANVIVAGTSCFT 204
>gi|71649837|ref|XP_813630.1| ribulose-5-phosphate 3-epimerase [Trypanosoma cruzi strain CL
Brener]
gi|70878531|gb|EAN91779.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma cruzi]
gi|159137080|gb|ABW88687.1| ribulose-phosphate 3-epimerase [Trypanosoma cruzi]
Length = 244
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 137/221 (61%), Gaps = 11/221 (4%)
Query: 7 IVPSILAADFSRLGEEISNI--TKAGAKQ-IHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSILA+DF+RL +E ++ + GA + +H DVMDG FVPNIS G V+ +LR +
Sbjct: 23 IAPSILASDFARLLDECKDVLSVEGGASEWLHVDVMDGHFVPNISIGMCVVEALRKHLQH 82
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F D H M+S D ++ +A AG +TFH E++ + R I A G + GVA+ P+TP
Sbjct: 83 TFLDVHCMVSHPDRWVDEMAKAGASQMTFHVEAAECPKAVARHIRAAGMQCGVALKPKTP 142
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ + ++I+E +DM+L+MTV PGFGGQ + +PK+ + + ++++VDGG+
Sbjct: 143 ASAVTELIEEKLVDMVLVMTVEPGFGGQSFMHDMMPKVAELRR--AYPHLNIQVDGGLGE 200
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ--KGEISYAKRLNDLKKS 219
+ I + +AGA+++V G+S F + +++ R N +KKS
Sbjct: 201 KTIDAAAEAGANIIVAGTSIFKAAVRRQVTETMR-NAVKKS 240
>gi|24586301|ref|NP_610298.2| CG30499 [Drosophila melanogaster]
gi|16768878|gb|AAL28658.1| LD09559p [Drosophila melanogaster]
gi|21645589|gb|AAM71098.1| CG30499 [Drosophila melanogaster]
gi|220942676|gb|ACL83881.1| CG30499-PA [synthetic construct]
gi|220952920|gb|ACL89003.1| CG30499-PA [synthetic construct]
Length = 221
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR+ +
Sbjct: 6 KIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKIKTAF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+ + + I +ADAG ++ TFH E + R R + G K G+AI P T V
Sbjct: 66 FETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKVGLAIKPGTEVQ 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE + D++L+MTV PGFGGQ + +PK++ + ++ +EVDGGV + I
Sbjct: 126 DLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRE--NYPNLDIEVDGGVGPKTIH 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AGA+++V G++ + K L D+ S L
Sbjct: 184 CCAEAGANMIVSGTAVVGASDQSQVIKELRDVVHSYL 220
>gi|296170730|ref|ZP_06852303.1| ribulose-phosphate 3-epimerase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894613|gb|EFG74349.1| ribulose-phosphate 3-epimerase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 229
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +E + + GA +H DVMD FVPN++ G V+ SL + + D
Sbjct: 10 IAPSILSADFARLADEAAAVV--GADWLHVDVMDNHFVPNLTIGLPVVESLLAATTIPMD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 68 CHLMIEDPDRWAPGYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ + D +LIM+V PGFGGQ I + K+R A+ LI G+ +I +E+DGG+ I+
Sbjct: 128 LEILPQFDTLLIMSVEPGFGGQSFIPEVLSKVRTARKLIDAGELTILVEIDGGINDDTIE 187
Query: 185 SLVQAGADLLVVGSSFFNQK 204
+AG D V GS+ + +
Sbjct: 188 QAAEAGVDCFVAGSAVYGAE 207
>gi|308321268|gb|ADO27786.1| ribulose-phosphate 3-epimerase [Ictalurus furcatus]
Length = 228
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 4/204 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL++D S+LG E + + GA +H DVMDG FVPNI+FG ++ LR
Sbjct: 1 MAYTAKIGPSILSSDLSQLGRECERMMECGADYLHLDVMDGRFVPNITFGHPMVECLRKA 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ FD H+M+SS + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 VGPNPFFDMHMMVSSPEQWVKPMAAAGANQYTFHLEATTNPGSLIKEIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEELAQWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
I +AGA+++V GS+
Sbjct: 179 GPDTIHRCAEAGANMIVSGSAVLG 202
>gi|56755473|gb|AAW25916.1| unknown [Schistosoma japonicum]
Length = 237
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 4/211 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SD 62
I I PSIL AD S+L N+ +GA +H D+MDG FVPNI+ G V+ SL+ +
Sbjct: 9 ILIGPSILNADLSQLAVVCDNLLNSGADYLHLDIMDGHFVPNITIGHPVVASLKKHLPCK 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D H+M+S + + + AG TFH ESS + ++ I K G+ I P+TP
Sbjct: 69 AFLDLHMMVSDPEKWVENMKAAGASQYTFHFESSKDVMHCIQKIREADMKVGLGIKPKTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V + +D +DM+LIMTV PGFGGQ+ + +PK+R + ++ +EVDGGVT +N
Sbjct: 129 VTEILPYVDLVDMVLIMTVEPGFGGQKFMADMLPKVRYLRE--KYTNLDIEVDGGVTLKN 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I+ V+AGA+++V G+ + + S K +
Sbjct: 187 IRDCVEAGANMIVSGTEITSHEDPASIIKLM 217
>gi|45198313|ref|NP_985342.1| AFL208Cp [Ashbya gossypii ATCC 10895]
gi|51701884|sp|Q755M2|RPE_ASHGO RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|44984200|gb|AAS53166.1| AFL208Cp [Ashbya gossypii ATCC 10895]
Length = 239
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 126/219 (57%), Gaps = 16/219 (7%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-- 64
I PSILA+DF+ L + AGA+ +H DVMDG FVPNI+ G +++SLR V
Sbjct: 6 IAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVGD 65
Query: 65 ---------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
FDCH+M++ + +++ + G D TFH E++ + ++ I + G +
Sbjct: 66 KESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYEATKNPLELVKLIKSRGIRAAC 125
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
AI P+TPV +L ++ +DM L+MTV PGFGGQ+ + +PK+ + + + ++VD
Sbjct: 126 AIKPDTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVAALREKFPQ--LDIQVD 183
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFF---NQKGEISYAK 211
GG+ I +AGA+++V G+S F +QK ISY K
Sbjct: 184 GGLGKETIPHAAKAGANVIVAGTSVFAAADQKDVISYMK 222
>gi|56753147|gb|AAW24783.1| SJCHGC01154 protein [Schistosoma japonicum]
gi|226485661|emb|CAX75250.1| hypotherical protein [Schistosoma japonicum]
gi|226485663|emb|CAX75251.1| hypotherical protein [Schistosoma japonicum]
Length = 237
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 4/211 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SD 62
I I PSIL AD S+L N+ +GA +H D+MDG FVPNI+ G V+ SL+ +
Sbjct: 9 ILIGPSILNADLSQLAVVCDNLLNSGADYLHLDIMDGHFVPNITIGHPVVASLKKHLPCK 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D H+M+S + + + AG TFH ESS + ++ I K G+ I P+TP
Sbjct: 69 AFLDLHMMVSDPEKWVENMKAAGASQYTFHFESSKDVMHCIQKIREADMKVGLGIKPKTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V + +D +DM+LIMTV PGFGGQ+ + +PK+R + ++ +EVDGGVT +N
Sbjct: 129 VTEVLPYVDLVDMVLIMTVEPGFGGQKFMADMLPKVRYLRE--KYTNLDIEVDGGVTLKN 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I+ V+AGA+++V G+ + + S K +
Sbjct: 187 IRDCVEAGANMIVSGTEITSHEDPASIIKLM 217
>gi|229493493|ref|ZP_04387278.1| ribulose-phosphate 3-epimerase [Rhodococcus erythropolis SK121]
gi|229319454|gb|EEN85290.1| ribulose-phosphate 3-epimerase [Rhodococcus erythropolis SK121]
Length = 223
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +E + ++ G+ +H DVMD FVPN++ G V+ SL +D D
Sbjct: 2 IAPSILSADFARLADEATAVS--GSDWLHVDVMDAHFVPNLTLGLPVVESLLKATDIPLD 59
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + + A+AG +TFH E++ R R I A G K G++I P TP+
Sbjct: 60 CHLMIENPERWAPPYAEAGAYNVTFHAEATDDPRSVARDIRAAGAKAGLSIKPGTPIDDY 119
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ + D +LIM+V PGFGGQ + + K R + L+ G+ ++ +E+DGG+ + I+
Sbjct: 120 LEILKDFDTLLIMSVEPGFGGQSFMPQVLDKARAVRKLVDSGELTLLVEIDGGINASTIE 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ + ++L SA
Sbjct: 180 QAAEAGIDCFVAGSAVYGASDPGEAVRKLRAQAASA 215
>gi|302926303|ref|XP_003054268.1| hypothetical protein NECHADRAFT_74815 [Nectria haematococca mpVI
77-13-4]
gi|256735209|gb|EEU48555.1| hypothetical protein NECHADRAFT_74815 [Nectria haematococca mpVI
77-13-4]
Length = 313
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 127/233 (54%), Gaps = 31/233 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF++ G + + + GA +H D+MDG FVPNI+FG V+ S+R +
Sbjct: 1 MAPKTIIAPSILSADFAQFGHDCARTMEQGADWLHVDIMDGHFVPNITFGPPVVASIRGH 60
Query: 61 SDS--------VFDCHLMISSIDSHINIIADAGCDIITFHPES-------SPHIRRS--- 102
D FDCH+MI+ + AGC++ FH E+ SP +
Sbjct: 61 VDQPTEALGRGTFDCHMMIAEPKKWVKEFKKAGCNLYCFHYEAAFSSDAESPEQKTDDKT 120
Query: 103 -----LRTIHAMGKKTGVAINPETPVAILEDVIDEI------DMILIMTVNPGFGGQQLI 151
+R IH G G+AI P+T V +L ++++ DM+LIMTV PGFGGQ+ +
Sbjct: 121 NPKALIRYIHDNGLLAGIAIKPDTSVDVLWEILENAKEQERPDMVLIMTVYPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
S +PK++ + + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 ASELPKVQALREKYPE--LNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAK 231
>gi|125810190|ref|XP_001361393.1| GA15886 [Drosophila pseudoobscura pseudoobscura]
gi|54636568|gb|EAL25971.1| GA15886 [Drosophila pseudoobscura pseudoobscura]
Length = 221
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 129/222 (58%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL AD + LG E + GA +H DVMDG FVPN++FG +++SLR+
Sbjct: 1 MSVKAKIGPSILNADLANLGAESKKLLDNGADYLHLDVMDGNFVPNLTFGHPMVKSLRNK 60
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I+ +ADAG ++ TFH E + + R + G + G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWISPMADAGVNLYTFHIEPVDDVYKVSRLVQEAGMQVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T VA LE I D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTKVADLEKYISIADVVLVMTVEPGFGGQSFMADMMPKVEWLRQ--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I+ ++GA+++V G++ + K + D+ +S L
Sbjct: 179 PKTIECCAKSGANMIVSGTAVVGATDQRQVIKDMRDVVQSYL 220
>gi|146423288|ref|XP_001487574.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 232
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 124/215 (57%), Gaps = 8/215 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS---YSD- 62
I PSILA+DF+ LG + GA +H DVMDG FVPNIS G +I SLR+ SD
Sbjct: 6 IAPSILASDFAHLGCNCHRMYDNGADWLHIDVMDGHFVPNISMGPPIITSLRNEIPRSDT 65
Query: 63 --SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FDCH+M+S + + +A AG D TFH ES+ ++ I + G K A+ P
Sbjct: 66 KASFFDCHMMVSEPEKWVPEVAKAGGDQYTFHYESTNDPVALVKLIKSHGMKAACAVKPG 125
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +L + +++DM L+MTV PGFGGQ+ + +PK+ + + ++++VDGG+
Sbjct: 126 TPVDVLYPLAEQLDMALVMTVEPGFGGQKFMPEMMPKVEALRKKFPQ--LNIQVDGGLGK 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + AGA+++V G++ F + + L D
Sbjct: 184 DTIGAAADAGANVIVAGTAVFKASDPLEMIQILRD 218
>gi|326428717|gb|EGD74287.1| ribulose-phosphate 3-epimerase [Salpingoeca sp. ATCC 50818]
Length = 246
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISN-ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
Q+ PSILA+D S L + + + A +H D+MDG FVPN++ G V++ LR ++ +
Sbjct: 31 QVGPSILASDLSMLAADSKKAMEQWTADYLHVDIMDGHFVPNLTIGPPVVKCLRKHTTAF 90
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+S+ + + +A AG D TFH E++ + ++ G K G+ I P+TPV
Sbjct: 91 LDCHLMVSNPEHWVKDMAAAGADRFTFHFEATNDADALIEEVNKTGMKCGMVIKPKTPVD 150
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+L +D ID++LIMTV PGFGGQ + + K++ +A K +++EVDGG+ + I
Sbjct: 151 VLFPYLDRIDLVLIMTVEPGFGGQSFMVDMMDKVKTLRAKSPK--LNIEVDGGLNLKTID 208
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+++V GS+ F + + L D
Sbjct: 209 TAAKAGANMIVAGSAVFKAEDPKLVVQTLRD 239
>gi|301773960|ref|XP_002922398.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Ailuropoda
melanoleuca]
gi|281354501|gb|EFB30085.1| hypothetical protein PANDA_011370 [Ailuropoda melanoleuca]
Length = 228
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECFRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTAVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I +AGA+++V GS+
Sbjct: 179 GPDTIHRCAEAGANMIVSGSA 199
>gi|311272992|ref|XP_003133677.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Sus scrofa]
Length = 228
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
I +AGA+++V GS+ +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMRSE 204
>gi|319948959|ref|ZP_08023064.1| ribulose-phosphate 3-epimerase [Dietzia cinnamea P4]
gi|319437397|gb|EFV92412.1| ribulose-phosphate 3-epimerase [Dietzia cinnamea P4]
Length = 222
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 4/218 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL EI I A IH DVMDG FVPN+SFGA V ++ +D D
Sbjct: 7 IAPSILSADFARLDREIERIPSA--DWIHVDVMDGHFVPNLSFGAPVAAAVGRVTDKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + + DAG +T+H E++ +H G + G++I P TP +
Sbjct: 65 CHLMIENPLRWVGDYVDAGAANVTYHLEAADDPVAVADLLHVKGSRAGISIKPGTPAEMC 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+V+D +D++L+M+V PGFGGQ+ + + K+R +A I +R + +++DGG+ + I
Sbjct: 125 FEVLDHVDLVLVMSVEPGFGGQKFMPEVLDKVRALRAEIDRRGLDVLIQIDGGIDADTIG 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AG D+ V GS+ + + L D +A A
Sbjct: 185 ECAAAGCDVFVAGSAVYGAPDPDAMIGTLRDRALAARA 222
>gi|330805967|ref|XP_003290947.1| ribulose phosphate 3-epimerase [Dictyostelium purpureum]
gi|325078908|gb|EGC32535.1| ribulose phosphate 3-epimerase [Dictyostelium purpureum]
Length = 228
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 121/198 (61%), Gaps = 5/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L++DFS L + + + GA +H DVMDG FVPN++ GA VI+SLR ++ D
Sbjct: 7 ICPSLLSSDFSFLARDANYMLDCGADWLHMDVMDGHFVPNLTIGAPVIKSLRKHTKGHLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAINPETPV 123
CHLM+++ + I AG D ITFH E + + ++ I G + +++ P+TP+
Sbjct: 67 CHLMVTNPELMIEDFKSAGADSITFHIEVTEERGITNQVIKKIKDAGMQVAISVKPKTPI 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ID++D +LIMTV PGFGGQ ++ +PK++ + +++++VDGG+ I
Sbjct: 127 ESIFPYIDQLDFVLIMTVEPGFGGQSFMKDMMPKVKLLRQ--KYPNLNIQVDGGLDPNTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
QAGA+++V GS+ F
Sbjct: 185 DEAAQAGANVIVAGSALF 202
>gi|74005311|ref|XP_536051.2| PREDICTED: similar to Ribulose-phosphate 3-epimerase
(Ribulose-5-phosphate-3-epimerase) (HUSSY-17) isoform 1
[Canis familiaris]
Length = 228
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I +AGA+++V GS+
Sbjct: 179 GPDTIHKCAEAGANMIVSGSA 199
>gi|294054695|ref|YP_003548353.1| ribulose-phosphate 3-epimerase [Coraliomargarita akajimensis DSM
45221]
gi|293614028|gb|ADE54183.1| ribulose-phosphate 3-epimerase [Coraliomargarita akajimensis DSM
45221]
Length = 217
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 10/213 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSILA D + L + I AG + +H D+MDG FVPN++FG I+++R +D
Sbjct: 4 IVLAPSILAGDHADLRSSLREIEAAGLEWVHLDIMDGHFVPNLTFGPQTIKAMREGTDLF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + I+ DAG D IT H E + +L I + G K GV +NP+T
Sbjct: 64 FDVHLMLDNPHQFIDAFIDAGADQITIHVEPDYPVSDTLEAIKSKGVKCGVVLNPDTEAE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI------RQAKALIGKRSISLEVDGGV 178
+ ++ D++L+MTV PGFGGQ E +PK+ RQ L + LEVDGGV
Sbjct: 124 AAKPYLELCDIVLLMTVQPGFGGQSFREDVLPKMETFANWRQELGL----NYRLEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ + G D LV G++FF + I +A
Sbjct: 180 DLNTATACTERGVDTLVAGTAFFKAEDRIQFAN 212
>gi|291392153|ref|XP_002712491.1| PREDICTED: ribulose-5-phosphate-3-epimerase-like [Oryctolagus
cuniculus]
Length = 228
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ +AGA+++V GS+ +
Sbjct: 179 GPDTVHKCAEAGANMIVSGSAIMKSE 204
>gi|325179807|emb|CCA14210.1| ribulosephosphate 3epimerase putative [Albugo laibachii Nc14]
Length = 226
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 121/198 (61%), Gaps = 3/198 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
+I PS+LA+D + + +E + +GA +H DVMDG FVPNIS+GA VI+ LR ++ +
Sbjct: 8 KIGPSLLASDLASIKDEALKVLNSGADYLHLDVMDGHFVPNISWGAPVIKCLRMHTPKAF 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+S + + IADAG D TFH E++ + + I K GVAI PET V
Sbjct: 68 FDVHMMVSEPEKWVQDIADAGGDQFTFHFEATKDPKALIEQIRKAKMKVGVAIKPETEVE 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++ +DM+L+MTV PGFGGQ + + +PKI + ++ +EVDGG+ I
Sbjct: 128 QVFPLVHLVDMVLVMTVEPGFGGQVFMANMMPKIESLRK--SYPTLDIEVDGGLGPSTID 185
Query: 185 SLVQAGADLLVVGSSFFN 202
+AGA+++V GSS F
Sbjct: 186 IASKAGANMIVAGSSVFR 203
>gi|296205467|ref|XP_002749783.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 1
[Callithrix jacchus]
Length = 228
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ +AGA+++V GS+
Sbjct: 179 GPDTVHKCAEAGANMIVSGSA 199
>gi|283769594|ref|ZP_06342490.1| ribulose-phosphate 3-epimerase [Bulleidia extructa W1219]
gi|283103862|gb|EFC05248.1| ribulose-phosphate 3-epimerase [Bulleidia extructa W1219]
Length = 209
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 126/217 (58%), Gaps = 12/217 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILA +R +++ + ++ A+ IH D+MDG FVPN+S+G V++ LRS S
Sbjct: 1 MKIAPSILAIQMNRFSQQMDELNQSSAEWIHIDIMDGHFVPNLSYGPHVVKGLRSSSHKF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLM+S + N AG D ITFH E+ I + +H G K G++I P TP
Sbjct: 61 FDVHLMVSDPIFYANAFIKAGADAITFHVEALKKEEIVPFIHQLHQQGVKVGISIKPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
V+ +E+ + +D++L+M+V PGFGGQ + + KI Q + +RS +EVDGG+
Sbjct: 121 VSAIEEYLSLVDIVLVMSVEPGFGGQSFMPMALDKIEQ----LARRSENFEIEVDGGIDQ 176
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ GA +LV GS F KG+I +R+ L+
Sbjct: 177 ETGYLCKEKGATVLVAGSYIF--KGKIE--ERVQSLR 209
>gi|322827788|gb|EFZ31800.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 244
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 127/202 (62%), Gaps = 8/202 (3%)
Query: 7 IVPSILAADFSRLGEEISNI--TKAGAKQ-IHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSILA+DF+RL +E ++ + GA + +H DVMDG FVPNIS G V+ +LR +
Sbjct: 23 IAPSILASDFARLLDECKDVLSVEGGASEWLHVDVMDGHFVPNISIGMCVVEALRKHLQH 82
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F D H M+S D ++ +A AG +TFH E++ + R I A G + GVA+ P+TP
Sbjct: 83 TFLDVHCMVSHPDRWVDEMAKAGASQMTFHVEAAECPKAVARHIRAAGMQCGVALKPKTP 142
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ + ++I+E +DM+L+MTV PGFGGQ + +PK+ + + ++++VDGG+
Sbjct: 143 ASAVTELIEEKLVDMVLVMTVEPGFGGQSFMHDMMPKVAELRR--AYPHLNIQVDGGLGE 200
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
+ I + +AGA+++V G+S F
Sbjct: 201 KTIDAAAEAGANIIVAGTSIFK 222
>gi|40385883|ref|NP_954699.1| ribulose-phosphate 3-epimerase isoform 1 [Homo sapiens]
gi|109100810|ref|XP_001109838.1| PREDICTED: ribulose-phosphate 3-epimerase isoform 5 [Macaca
mulatta]
gi|114583049|ref|XP_001146078.1| PREDICTED: ribulose-phosphate 3-epimerase isoform 9 [Pan
troglodytes]
gi|332209938|ref|XP_003254067.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 1 [Nomascus
leucogenys]
gi|34924986|sp|Q96AT9|RPE_HUMAN RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Ribulose-5-phosphate-3-epimerase
gi|325533958|pdb|3OVP|A Chain A, Crystal Structure Of Hrpe
gi|325533959|pdb|3OVP|B Chain B, Crystal Structure Of Hrpe
gi|325533960|pdb|3OVQ|A Chain A, Crytal Structure Of Hrpe And D-Ribulose-5-Phospate Complex
gi|325533961|pdb|3OVQ|B Chain B, Crytal Structure Of Hrpe And D-Ribulose-5-Phospate Complex
gi|325533962|pdb|3OVR|A Chain A, Crystal Structure Of Hrpe And D-Xylulose 5-Phosphate
Complex
gi|325533963|pdb|3OVR|B Chain B, Crystal Structure Of Hrpe And D-Xylulose 5-Phosphate
Complex
gi|16876982|gb|AAH16764.1| Ribulose-5-phosphate-3-epimerase [Homo sapiens]
gi|38013941|gb|AAH05148.2| Ribulose-5-phosphate-3-epimerase [Homo sapiens]
gi|48735264|gb|AAH72401.1| Ribulose-5-phosphate-3-epimerase [Homo sapiens]
gi|119590880|gb|EAW70474.1| ribulose-5-phosphate-3-epimerase, isoform CRA_c [Homo sapiens]
gi|158255506|dbj|BAF83724.1| unnamed protein product [Homo sapiens]
gi|190689795|gb|ACE86672.1| ribulose-5-phosphate-3-epimerase protein [synthetic construct]
gi|190691163|gb|ACE87356.1| ribulose-5-phosphate-3-epimerase protein [synthetic construct]
gi|261860682|dbj|BAI46863.1| ribulose-5-phosphate-3-epimerase [synthetic construct]
Length = 228
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ +AGA+++V GS+
Sbjct: 179 GPDTVHKCAEAGANMIVSGSA 199
>gi|194755605|ref|XP_001960074.1| GF11711 [Drosophila ananassae]
gi|190621372|gb|EDV36896.1| GF11711 [Drosophila ananassae]
Length = 221
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 127/217 (58%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR+ +
Sbjct: 6 KIGPSILNADLSNLACESQKLLDNGADYLHLDVMDGNFVPNLTFGHPMVKSLRNKIKTAF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+ + + I +ADAG ++ T+H E + + R + G K G+AI P T V
Sbjct: 66 FEAHMMVQNPEQWIEPMADAGVNLYTYHVEPVEDVAKVSRQVQDAGMKVGLAIKPGTEVK 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E ID +D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV + I+
Sbjct: 126 DIEKYIDMVDVVLVMTVEPGFGGQSFMADMMPKVEWLRE--NYPNLDIEVDGGVGPKTIE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
++GA+++V G++ + ++L D+ +S L
Sbjct: 184 CCAKSGANMIVSGTAVVGAPDQGQVIRQLRDVVQSYL 220
>gi|71421279|ref|XP_811755.1| ribulose-5-phosphate 3-epimerase [Trypanosoma cruzi strain CL
Brener]
gi|70876456|gb|EAN89904.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 244
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 127/202 (62%), Gaps = 8/202 (3%)
Query: 7 IVPSILAADFSRLGEEISNI--TKAGAKQ-IHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSILA+DF+RL +E ++ + GA + +H DVMDG FVPNIS G V+ +LR +
Sbjct: 23 IAPSILASDFARLLDECKDVLSVEGGASEWLHVDVMDGHFVPNISIGMCVVEALRKHLQH 82
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F D H M+S D ++ +A AG +TFH E++ + R I A G + GVA+ P+TP
Sbjct: 83 TFLDVHCMVSHPDRWVDEMAKAGASQMTFHVEAAECPKAVARHIRAAGMQCGVALKPKTP 142
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ + ++I+E +DM+L+MTV PGFGGQ + +PK+ + + ++++VDGG+
Sbjct: 143 ASAVTELIEEKLVDMVLVMTVEPGFGGQSFMHDMMPKVAELRR--AYPHLNIQVDGGLGE 200
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
+ I + +AGA+++V G+S F
Sbjct: 201 KTIDAAAEAGANIIVAGTSIFK 222
>gi|27532955|ref|NP_079959.2| ribulose-phosphate 3-epimerase [Mus musculus]
gi|34924979|sp|Q8VEE0|RPE_MOUSE RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Ribulose-5-phosphate-epimerase
gi|17512311|gb|AAH19126.1| Ribulose-5-phosphate-3-epimerase [Mus musculus]
gi|26353090|dbj|BAC40175.1| unnamed protein product [Mus musculus]
gi|26383424|dbj|BAB30922.2| unnamed protein product [Mus musculus]
gi|148667818|gb|EDL00235.1| ribulose-5-phosphate-3-epimerase, isoform CRA_a [Mus musculus]
gi|149016015|gb|EDL75296.1| similar to Ribulose-5-phosphate-3-epimerase, isoform CRA_b [Rattus
norvegicus]
gi|187465999|emb|CAQ52185.1| ribulose-5-phosphate-3-epimerase [Mus musculus]
Length = 228
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + ++ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PTLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
++ +AGA+++V GS+
Sbjct: 179 GPDTVQKCAEAGANMIVSGSA 199
>gi|15827205|ref|NP_301468.1| ribulose-phosphate 3-epimerase [Mycobacterium leprae TN]
gi|221229683|ref|YP_002503099.1| ribulose-phosphate 3-epimerase [Mycobacterium leprae Br4923]
gi|17380276|sp|Q9CCP9|RPE_MYCLE RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|13092753|emb|CAC30062.1| putatibe ribulose-phosphate 3-epimerase [Mycobacterium leprae]
gi|219932790|emb|CAR70647.1| putatibe ribulose-phosphate 3-epimerase [Mycobacterium leprae
Br4923]
Length = 224
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 117/198 (59%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + A A +H DVMDG FVPN++ G V++SL + SD D
Sbjct: 5 IAPSILAADFARLTDEAAVV--ASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPMD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + I G K G+ + P TP+
Sbjct: 63 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVAHDIRTAGAKAGIGVKPGTPLNPY 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
D++ D +LIM+V PGFGGQ I + K+R + ++ G+ +I +E+DGG+ + I+
Sbjct: 123 LDILPHFDTLLIMSVEPGFGGQAFIPEVLSKVRTVRKMVDAGELTILVEIDGGINADTIE 182
Query: 185 SLVQAGADLLVVGSSFFN 202
+AG D V GS+ +
Sbjct: 183 QAAEAGVDCFVAGSAVYG 200
>gi|297609769|ref|NP_001063604.2| Os09g0505700 [Oryza sativa Japonica Group]
gi|60390595|sp|Q9SE42|RPE1_ORYSJ RecName: Full=Ribulose-phosphate 3-epimerase, cytoplasmic isoform;
AltName: Full=Cyt-RPEase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPEcyt; AltName:
Full=Ribulose-5-phosphate-epimerase
gi|28373310|pdb|1H1Y|A Chain A, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-
Epimerase From Rice Complexed With Sulfate
gi|28373311|pdb|1H1Y|B Chain B, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-
Epimerase From Rice Complexed With Sulfate
gi|28373312|pdb|1H1Z|A Chain A, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-
Epimerase From Rice Complexed With Sulfate And Zinc
gi|28373313|pdb|1H1Z|B Chain B, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-
Epimerase From Rice Complexed With Sulfate And Zinc
gi|6007803|gb|AAF01048.1|AF189365_1 D-ribulose-5-phosphate 3-epimerase [Oryza sativa]
gi|125564291|gb|EAZ09671.1| hypothetical protein OsI_31954 [Oryza sativa Indica Group]
gi|215697446|dbj|BAG91440.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679043|dbj|BAF25518.2| Os09g0505700 [Oryza sativa Japonica Group]
Length = 228
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 130/214 (60%), Gaps = 10/214 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ +A AG TFH E S + + +++I A G + GV++ P TPV
Sbjct: 68 DCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVE 127
Query: 125 ---ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVTS 180
L + + ++++L+MTV PGFGGQ+ + + K+R AL K S+ +EVDGG+
Sbjct: 128 EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVR---ALRKKYPSLDIEVDGGLGP 184
Query: 181 RNIKSLVQAGADLLVVGSSFFN--QKGEISYAKR 212
I AGA+ +V GSS F + GE+ A R
Sbjct: 185 STIDVAASAGANCIVAGSSIFGAAEPGEVISALR 218
>gi|148356250|ref|NP_001091548.1| ribulose-phosphate 3-epimerase [Bos taurus]
gi|146186671|gb|AAI40632.1| RPE protein [Bos taurus]
Length = 228
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLASLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATDNPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
I +AGA+++V GS+ +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMRSE 204
>gi|74211763|dbj|BAE29233.1| unnamed protein product [Mus musculus]
Length = 228
Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + ++ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PTLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
++ +AGA+++V GS+
Sbjct: 179 GPDTVQKCAEAGANMIVSGSA 199
>gi|66816491|ref|XP_642255.1| ribulose phosphate 3-epimerase [Dictyostelium discoideum AX4]
gi|60470330|gb|EAL68310.1| ribulose phosphate 3-epimerase [Dictyostelium discoideum AX4]
Length = 225
Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L++DF+ L + + + + GA +H DVMD FVPN++ GA +++SLR ++ FD
Sbjct: 7 ICPSLLSSDFAFLARDSNYMLECGADWLHIDVMDNHFVPNLTLGAPIVKSLRKHTKGYFD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESS-PH--IRRSLRTIHAMGKKTGVAINPETPV 123
CHLM+++ ++ I +AG + ITFH E++ P ++ + I G K + + P+TP+
Sbjct: 67 CHLMVTNPETMIEDFKNAGANSITFHIEATEPRGITQKVITQIKEAGMKVALCVKPKTPI 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +D++D +LIMTV PGFGGQ ++ +PK++ ++ +++++VDGG+ I
Sbjct: 127 EEVFPYVDQLDFVLIMTVEPGFGGQSFMKDMMPKVKTLRS--KYPNLNIQVDGGLDPSTI 184
Query: 184 KSLVQAGADLLVVGSSFF 201
+AGA+++V GS+ F
Sbjct: 185 DMAAEAGANVIVAGSALF 202
>gi|153950960|ref|YP_001398511.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. doylei
269.97]
gi|152938406|gb|ABS43147.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. doylei
269.97]
Length = 215
Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 2/200 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ I+FH ES H R I + + +NP TP+
Sbjct: 61 LDVHLMVKDVSKFVDLFIPLKPKFISFHMESEAHPIRLCDYIRSQEIHPAIVLNPHTPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ + +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
L ++GAD+LV GS F+
Sbjct: 181 ASDLEESGADILVAGSYIFS 200
>gi|190345043|gb|EDK36853.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 232
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 8/202 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS---YSD- 62
I PSILA+DF+ LG + GA +H DVMDG FVPNIS G +I SLR+ SD
Sbjct: 6 IAPSILASDFAHLGCNCHRMYDNGADWLHIDVMDGHFVPNISMGPPIITSLRNEIPRSDT 65
Query: 63 --SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FDCH+M+S + + +A AG D TFH ES+ ++ I + G K A+ P
Sbjct: 66 KASFFDCHMMVSEPEKWVPEVAKAGGDQYTFHYESTNDPVALVKLIKSHGMKAACAVKPG 125
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +L + +++DM L+MTV PGFGGQ+ + +PK+ + + ++++VDGG+
Sbjct: 126 TPVDVLYPLAEQLDMALVMTVEPGFGGQKFMPEMMPKVEALRKKFPQ--LNIQVDGGLGK 183
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
I + AGA+++V G++ F
Sbjct: 184 DTIGAAADAGANVIVAGTAVFK 205
>gi|46204897|ref|ZP_00049331.2| COG0036: Pentose-5-phosphate-3-epimerase [Magnetospirillum
magnetotacticum MS-1]
Length = 222
Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +++ I A A H DVMD FVPN++ G V L S D
Sbjct: 5 IAPSILSADFANLERDLNAI--ATADYAHVDVMDNHFVPNLTLGLPVFERLAQVSPVPID 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AG +TFH E++ R R + +G + GVA+ P TPV
Sbjct: 63 AHLMIEDPDRWAPAYAEAGAASVTFHAEAAAAPVRLARELRRLGARAGVALRPATPVEPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
D++ E+DMIL+MTV PGFGGQ IE T+PKIR+A+ + + + ++VDGGV+ I+
Sbjct: 123 LDLLTEVDMILVMTVEPGFGGQSFIEGTLPKIRRAREAVSESGLDVWIQVDGGVSRSTIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AGA++ V GS+ + + + L +L +++
Sbjct: 183 RAADAGANVFVAGSAVYGAENVPEEIQALRELAEAS 218
>gi|291515117|emb|CBK64327.1| ribulose-5-phosphate 3-epimerase [Alistipes shahii WAL 8301]
Length = 208
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+L+ADF L + + + A+ +H DVMDG FVPNISFG V++++R + D HLM
Sbjct: 1 MLSADFGHLERDTRMVDASAAEWVHIDVMDGVFVPNISFGFPVLKAIRKATAKFLDVHLM 60
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
I S + ++ A+AG D++TFH E++ + I G K GV+I P TPV L +V+
Sbjct: 61 IVSPEKYVARFAEAGADLVTFHLEATDDPAGCVALIRRAGAKAGVSIKPATPVEALREVL 120
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSRNIKSLV 187
+D++L+M+V PGFGGQ I ++ KI Q +A+ +G +I +EVDGG+++RN ++
Sbjct: 121 PLVDLVLVMSVEPGFGGQSFIPGSLEKIAQLRAMAREMGLETI-IEVDGGISARNAGAVY 179
Query: 188 QAGADLLVVGSSFFNQK 204
AGAD+LV GSS F +
Sbjct: 180 GAGADVLVAGSSVFGAE 196
>gi|328353328|emb|CCA39726.1| ribulose-phosphate 3-epimerase [Pichia pastoris CBS 7435]
Length = 238
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 124/223 (55%), Gaps = 11/223 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS------- 59
I PSIL+ADFS LG E + K A +H DVMDG FVPN++ G +I SLR
Sbjct: 6 IAPSILSADFSNLGCECHKMFKLRADWVHIDVMDGHFVPNLTMGPPIISSLRKAVPRGEK 65
Query: 60 --YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ FDCH+M+++ + + +A AG D TFH E++ + + I + G K AI
Sbjct: 66 DGQTTHFFDCHMMVANPEQWVPEVAKAGGDQYTFHYEATKDPVKLVELIKSHGLKAACAI 125
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P T V +L + D++DM L+MTV PGFGGQ+ + +PK+ +A ++ ++VDGG
Sbjct: 126 KPGTSVDVLYPLADKLDMALVMTVEPGFGGQKFMADMMPKVEALRAKF--PNLDIQVDGG 183
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I AGA+++V GSS F K + L D ++A
Sbjct: 184 LGKETIGVAADAGANVIVAGSSVFGAKDPGEVIRYLRDTVENA 226
>gi|94469030|gb|ABF18364.1| ribulose-5-phosphate-3-epimerase [Aedes aegypti]
Length = 224
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SD 62
S +I PSIL AD S+L EE + GA +H DVMDG FVPN++FG V++ LR+ D
Sbjct: 5 SAKIGPSILNADLSQLHEESQRLLDNGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIKD 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPET 121
+ F+ H+M+ + I +ADAG + TFH E + R + G K G+AI P T
Sbjct: 65 AFFETHMMVQAPQQWIEPMADAGVNQYTFHIEPVMDSVVDICRKVQEAGMKVGLAIKPGT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +++ I DMILIMTV PGFGGQ+ + +PK++ + ++ +EVDGGV
Sbjct: 125 PVETVKEFIPLADMILIMTVEPGFGGQKFMNDMMPKVQWLRE--NYPNLDIEVDGGVGPG 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + +AGA+++V G++ + + ++L
Sbjct: 183 TIDACAKAGANMIVAGTAIIRADDQAAVIRQL 214
>gi|227484659|ref|ZP_03914975.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
gi|227237379|gb|EEI87394.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
Length = 219
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 116/199 (58%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+A+F+ L ++ G K IH DVMDG FVPNISF VI +R +D
Sbjct: 2 VRLSPSILSANFANLQGDLDQTKGCGLKMIHIDVMDGIFVPNISFAFKVISDIRDKNDYF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I+ AG D IT H E+ ++ +L+ I G + G+ PET
Sbjct: 62 FDTHLMIEEPIRYIDEFKKAGSDRITVHYEACKDLKATLKAIRDAGMEVGLTAKPETDPK 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+L D+ID+IL+M+V PGFGGQ+ +E T + + I + + + ++VDGG+ + N
Sbjct: 122 LLLKYFDQIDLILVMSVRPGFGGQKFMEETKATMDLYRKYIDENNLKVKMQVDGGIKTTN 181
Query: 183 IKSLVQAGADLLVVGSSFF 201
++ ++ G D +V GS F
Sbjct: 182 VREVLDLGVDEVVSGSDIF 200
>gi|123968361|ref|YP_001009219.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str.
AS9601]
gi|123198471|gb|ABM70112.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str.
AS9601]
Length = 251
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 134/227 (59%), Gaps = 14/227 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y +
Sbjct: 16 IQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCNVP 75
Query: 65 FDCHLMISS------IDSHINIIADAGCD--IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S ++S++ + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLESYVKATKGPNGEPGVVIAHAEANIHLHRVLGRIRDLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEV 174
+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + I +++ + +EV
Sbjct: 136 LNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREIRNFIIEKNLDVDIEV 195
Query: 175 DGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
DGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 196 DGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|126337888|ref|XP_001364658.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase [Monodelphis
domestica]
Length = 228
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLACLGAECTRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++ID+ L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDLALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
I +AGA+++V GS+ +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMRSE 204
>gi|318037404|ref|NP_001187613.1| ribulose-phosphate 3-epimerase [Ictalurus punctatus]
gi|308323500|gb|ADO28886.1| ribulose-phosphate 3-epimerase [Ictalurus punctatus]
Length = 228
Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 4/204 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL++D S+LG E + + GA +H DVMDG FVPNI+FG ++ LR
Sbjct: 1 MAYTAKIGPSILSSDLSQLGRECERMMECGADYLHLDVMDGHFVPNITFGHPMVECLRKA 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 VGPNPFFDMHMMVSRPEQWVRPMAAAGANQYTFHLEATTNPGSLIKEIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ ++ S+ +EVDGGV
Sbjct: 121 PGTTVEELAQWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
I +AGA+++V GS+
Sbjct: 179 GPDTIHRCAEAGANMIVSGSAVLG 202
>gi|258654275|ref|YP_003203431.1| ribulose-phosphate 3-epimerase [Nakamurella multipartita DSM 44233]
gi|258557500|gb|ACV80442.1| ribulose-phosphate 3-epimerase [Nakamurella multipartita DSM 44233]
Length = 222
Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ I PSIL ADF+ L +E++ + AGA +H DVMD FVPN++ G V++SL +D
Sbjct: 2 TVLIAPSILNADFAHLADEVAAV--AGADWLHVDVMDNHFVPNLTLGLPVVQSLAKVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + A+AG +T H E+ +HA G + G+++ P TP+
Sbjct: 60 PLDCHLMIEDPNRWAVGYAEAGAHNVTVHAEAVADPIAMAADLHAAGARAGLSLKPGTPL 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
DV+ D +L+MTV PGFGGQ + + K+R A+ L+ G ++ ++VDGG+++
Sbjct: 120 EAWTDVLKHYDTLLVMTVEPGFGGQAFMADMMDKVRTARRLVDTGHLTVVVQVDGGISAD 179
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ +AGAD V GS+ ++
Sbjct: 180 TIEIAAEAGADCFVAGSAVYS 200
>gi|255632468|gb|ACU16584.1| unknown [Glycine max]
Length = 228
Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 12/208 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR +
Sbjct: 3 MTP--KIAPSMLSSDFANLASEAQRMLHFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINP 119
+ + DCHLM+++ ++ +A AG TFH E+S + + ++ I + G GVA+ P
Sbjct: 61 TKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVETSKDNWKELIQRIKSHGMIPGVALKP 120
Query: 120 ETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEV 174
TPV + +++ ++M+L+MTV PGFGGQ+ + T+ K+R ++ K+ S+ +EV
Sbjct: 121 GTPVGEVYPLVEAENPVEMVLVMTVEPGFGGQKFMAETMDKVR----ILRKKYPSLDIEV 176
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFN 202
DGG+ I AGA+ +V GSS F
Sbjct: 177 DGGLGPSTIDVAASAGANCIVAGSSVFG 204
>gi|86153820|ref|ZP_01072023.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121612304|ref|YP_001000158.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005116|ref|ZP_02270874.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81-176]
gi|85842781|gb|EAQ59993.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87250347|gb|EAQ73305.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81-176]
Length = 215
Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 125/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ I+FH ES H R I + G + +NP T +
Sbjct: 61 LDVHLMVKDVSKFIDLFIPLKPKFISFHIESEVHPIRLCEYIRSQGIHPAIVLNPHTSID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ + +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L ++GAD+LV GS F+ Y ++ LK
Sbjct: 181 ASDLEESGADILVAGSYIFSSN---DYKTAISSLK 212
>gi|224055996|ref|XP_002196985.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase [Taeniopygia
guttata]
Length = 228
Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E S + GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLAALGAECSRMLDCGADYLHLDVMDGHFVPNITFGHPVVESLRKR 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ FD H+M+++ + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQEPFFDMHMMVAAPEQWVKPMAVAGANQYTFHLEAADNPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK++ + S+ +EVDGGV
Sbjct: 121 PGTTVEHLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVQWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I +AGA+++V GS+
Sbjct: 179 GPDTIHKCAEAGANMIVSGSA 199
>gi|302664068|ref|XP_003023670.1| ribulose phosphate 3-epimerase (predicted) [Trichophyton verrucosum
HKI 0517]
gi|291187676|gb|EFE43052.1| ribulose phosphate 3-epimerase (predicted) [Trichophyton verrucosum
HKI 0517]
Length = 317
Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 51/262 (19%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 52 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 111
Query: 61 --------SDSVFDCHLMISSIDSHINII--------------ADAGCDIITFHPE---- 94
FDCH+MI+ + + + DAGCD+ FH E
Sbjct: 112 VQRPTCAGGKGTFDCHMMIAEVPTPFRFLRIPMPQPQKWAKEFKDAGCDLYCFHYEAAVE 171
Query: 95 ---------------SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEI 133
+SP + +R IH +G + G+AI PET V +L D+ I+
Sbjct: 172 STAAKEPSDNTTTEKTSP--KELIRYIHELGMQAGIAIKPETSVNVLWDILENKEAIERP 229
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
DM+L+MTVNPGFGGQ+ + S +PK++ +A +++EVDGG+ I AGA++
Sbjct: 230 DMVLVMTVNPGFGGQKFMASELPKVQALRAKY--PDMNIEVDGGLGVGTIDQAADAGANV 287
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
+V GS+ F + +L +
Sbjct: 288 IVAGSAVFGAQNPAEVIAKLRE 309
>gi|312139592|ref|YP_004006928.1| ribulose-phosphate 3-epimerase [Rhodococcus equi 103S]
gi|325672524|ref|ZP_08152220.1| ribulose-phosphate 3-epimerase [Rhodococcus equi ATCC 33707]
gi|311888931|emb|CBH48244.1| ribulose-phosphate 3-epimerase [Rhodococcus equi 103S]
gi|325556401|gb|EGD26067.1| ribulose-phosphate 3-epimerase [Rhodococcus equi ATCC 33707]
Length = 223
Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL EE + AGA +H DVMD FVPN++ G V++SL +D D
Sbjct: 2 IAPSILSADFARLAEEADAV--AGADWLHVDVMDAHFVPNLTLGLPVVQSLLKATDIPLD 59
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI A+AG +TFH E++ R I A G K G++I P TP+
Sbjct: 60 CHLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPISVARDIRAAGAKAGLSIKPNTPIEPY 119
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ D +L+M+V PGFGGQ I + + K R + L+ G+ + +E+DGG+ + ++
Sbjct: 120 LEILKSFDTLLVMSVEPGFGGQSFIPAVLDKARAVRKLVDAGELRLLVEIDGGINADTVE 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ + + + L + A
Sbjct: 180 QAAEAGIDCFVAGSAVYGAADPAAAVRGLREQAAKA 215
>gi|156407342|ref|XP_001641503.1| predicted protein [Nematostella vectensis]
gi|156228642|gb|EDO49440.1| predicted protein [Nematostella vectensis]
Length = 233
Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 3/197 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSD 62
S +I PSIL D S L +E + + + GA +H DVMDG FVPN++FGA +++ LR +
Sbjct: 9 SCKIGPSILNGDLSCLADECNRLLQCGADYLHLDVMDGHFVPNLTFGAPLVKCLRKKVPN 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ FD H+M+++ + ++ +A AG D TFH E++ ++ I G K G+ I P TP
Sbjct: 69 AFFDMHMMVANPEKWVDDMAGAGADQYTFHLEATDKPMELIQQIKKAGMKVGIGIKPGTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V + ++ ++M+LIMTV PGFGGQ + +PKI + R + +EVDGGV +
Sbjct: 129 VTDVLPYVEHVNMVLIMTVEPGFGGQSFMADMMPKIEFLRQKY--RELDIEVDGGVGTST 186
Query: 183 IKSLVQAGADLLVVGSS 199
+ +AGA+++V GS+
Sbjct: 187 VDVAAKAGANMIVSGSA 203
>gi|297571431|ref|YP_003697205.1| ribulose-phosphate 3-epimerase [Arcanobacterium haemolyticum DSM
20595]
gi|296931778|gb|ADH92586.1| ribulose-phosphate 3-epimerase [Arcanobacterium haemolyticum DSM
20595]
Length = 221
Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL DFS L E+ I+ A H DVMD FVPN++ G ++ ++ S
Sbjct: 3 IRISPSILNCDFSNLTGELDKISNA--DWAHVDVMDNHFVPNLTMGVPIVEAISRVSPIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +AG +TFH E++ R R + AMG + G+A+ P TP+
Sbjct: 61 IDTHLMIEDPDRWAPAFVEAGAQSVTFHAEAAKAPLRLARELRAMGARAGLAVKPATPIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++++E DMILIMTV PGFGGQ I++ +PK+ + + + K + ++VDGG++
Sbjct: 121 PYLEILNEFDMILIMTVEPGFGGQSFIDTMMPKVARTREAVNKSGLDVWVQVDGGISRAT 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I+ AGAD V GS+ ++
Sbjct: 181 IEQAASAGADTFVAGSAVYS 200
>gi|322784388|gb|EFZ11359.1| hypothetical protein SINV_07367 [Solenopsis invicta]
Length = 238
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 13/222 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL AD + L EE + GA +H DVMDG FVPN++FG +++ LR+ ++
Sbjct: 11 KIGPSILNADLAELYEESQQLLNNGADYLHLDVMDGHFVPNLTFGHPIVKCLRNKIKEAF 70
Query: 65 FDCHLMISSID-------SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
F+ H+M+S + + I +ADAG D TFH E + R + G K GVA+
Sbjct: 71 FETHMMVSKPEQVKYMQVAWIEPMADAGVDQYTFHVEPVEDVPLVCRKVREAGMKVGVAL 130
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P TPV ++ D D DMIL+MTV PGFGGQ+ +ES + K+ + + +EVDGG
Sbjct: 131 KPGTPVDVVTDYADLADMILVMTVEPGFGGQKFMESMLKKVAWLRE--NYPELDIEVDGG 188
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V I++ +AGA+++V G++ G AK + L+ +
Sbjct: 189 VGPATIEACAKAGANMIVSGTAII---GSADQAKVITTLRDT 227
>gi|328353327|emb|CCA39725.1| ribulose-phosphate 3-epimerase [Pichia pastoris CBS 7435]
Length = 235
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 125/229 (54%), Gaps = 16/229 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS------- 59
I PSIL+ADFS LG E + K A +H DVMDG FVPN++ G +I SLR
Sbjct: 6 IAPSILSADFSNLGCECHKMFKLRADWVHIDVMDGHFVPNLTMGPPIISSLRKAVPRGEK 65
Query: 60 --YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ FDCH+M+++ + + +A AG D TFH E++ + + I + G K AI
Sbjct: 66 DGQTTHFFDCHMMVANPEQWVPEVAKAGGDQYTFHYEATKDPVKLVELIKSHGLKAACAI 125
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P T V +L + D++DM L+MTV PGFGGQ+ + +PK+ +A ++ ++VDGG
Sbjct: 126 KPGTSVDVLYPLADKLDMALVMTVEPGFGGQKFMADMMPKVEALRAKF--PNLDIQVDGG 183
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND-----LKKSAL 221
+ I AGA+++V GSS F K + L D LKK L
Sbjct: 184 LGKETIGVAADAGANVIVAGSSVFGAKDPGEVIQFLRDTVQDSLKKKGL 232
>gi|227496157|ref|ZP_03926463.1| ribulose-phosphate 3-epimerase [Actinomyces urogenitalis DSM 15434]
gi|226834302|gb|EEH66685.1| ribulose-phosphate 3-epimerase [Actinomyces urogenitalis DSM 15434]
Length = 231
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 132/224 (58%), Gaps = 9/224 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP+I PSIL AD + L EE++ I A +H DVMD FVPN+ G +++ ++
Sbjct: 4 TPAIH--PSILNADQAHLAEELARIESADG--LHLDVMDNHFVPNMFAGPSFTQTVLEHT 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI D A+ GC ++T H E++ ++ +H +G + G+A+ P T
Sbjct: 60 SLPVDAHLMIEDADRWAPQYAEMGCAVVTAHAEATRAPFVLVKELHRLGAQAGIALRPTT 119
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVT 179
P+ ++E ++ EIDM+LIMTV PGFGGQ +E + KI A++++ + + L ++DGGV+
Sbjct: 120 PLEVVEPLLGEIDMLLIMTVEPGFGGQSFVEPMLRKIAAARSMVSAQGLQLRIQIDGGVS 179
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD+ V GS+ + + A+ ++ L++ A A+
Sbjct: 180 LTTIERAAEAGADVFVAGSAVYKSQ---DAAQAISTLRRLAGAV 220
>gi|157126418|ref|XP_001660886.1| ribulose-5-phosphate-3-epimerase [Aedes aegypti]
gi|108873289|gb|EAT37514.1| ribulose-5-phosphate-3-epimerase [Aedes aegypti]
Length = 224
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 4/212 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SD 62
S +I PSIL AD S+L EE + GA +H DVMDG FVPN++FG V++ LR+ D
Sbjct: 5 SAKIGPSILNADLSQLHEESQRLLDNGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIKD 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPET 121
+ F+ H+M+ + I +ADAG + TFH E + R + G K G+AI P T
Sbjct: 65 AFFETHMMVQAPQQWIEPMADAGVNQYTFHIEPVMDSVVDICRKVQEAGMKVGLAIKPGT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +++ I DMILIMTV PGFGGQ+ + +PK+ + ++ +EVDGGV
Sbjct: 125 PVETVKEFIPLADMILIMTVEPGFGGQKFMNDMMPKVHWLRE--NYPNLDIEVDGGVGPG 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + +AGA+++V G++ + + ++L
Sbjct: 183 TIDACAKAGANMIVAGTAIIRADDQAAVIRQL 214
>gi|268680227|ref|YP_003304658.1| ribulose-phosphate 3-epimerase [Sulfurospirillum deleyianum DSM
6946]
gi|268618258|gb|ACZ12623.1| ribulose-phosphate 3-epimerase [Sulfurospirillum deleyianum DSM
6946]
Length = 213
Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 121/198 (61%), Gaps = 2/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ DF R+ EEI+ I +AG +H DVMDG FVPN++ G V+ ++ + D
Sbjct: 3 VAPSILSCDFGRINEEITAICEAGCDLVHVDVMDGHFVPNLTIGPVVVNAVAKAATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A ++FH E H R ++ I G + +NP TP + +
Sbjct: 63 IHLMVENNTFFVDLFAPLKPKYLSFHIEEEKHPHRLIQKIRDYGISPAIVLNPHTPPSSI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E ++ ++DM+L+M+VNPGFGGQ+ I S + K K +I KR+ +EVDGGV ++NI+
Sbjct: 123 EYLLADLDMVLLMSVNPGFGGQKFIPSVLEKASLLKEMIEKRNTKTLIEVDGGVNNQNIQ 182
Query: 185 SLVQAGADLLVVGSSFFN 202
+L AG D++V G+ F+
Sbjct: 183 ALAHAGVDIVVAGNYVFS 200
>gi|296415738|ref|XP_002837543.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633415|emb|CAZ81734.1| unnamed protein product [Tuber melanosporum]
Length = 226
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 122/222 (54%), Gaps = 33/222 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKA-GAKQIHFDVMDGCFVPNISFGADVIRSLR- 58
M P I PSILA+DF L E S I K+ GA +H D+MDG FVPNI+ GA V+ +R
Sbjct: 1 MAPKPIIAPSILASDFGNLAHECSRIIKSEGADWLHIDIMDGHFVPNITIGAPVVTCIRR 60
Query: 59 ------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT------- 105
++ VFDCH+M++ + DAGCD+ FH E++ I + +T
Sbjct: 61 SVDRSEDWAKGVFDCHMMVAEPQKWLQDFKDAGCDLYCFHHEAA-EISKDPKTPSAELIE 119
Query: 106 -IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
IHA+G K GVAI P TP DM+L+MTV PGFGGQ+ +PK+ +
Sbjct: 120 NIHALGLKAGVAIKPGTPP----------DMVLVMTVEPGFGGQKFRPECMPKVEALR-- 167
Query: 165 IGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
KR + +EVDGG+ I +AGA+++V G++ F +
Sbjct: 168 --KRYPELDIEVDGGLGLGTIDLAAEAGANVIVAGTAVFGAQ 207
>gi|71748742|ref|XP_823426.1| ribulose-5-phosphate 3-epimerase [Trypanosoma brucei TREU927]
gi|70833094|gb|EAN78598.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma brucei]
gi|261333380|emb|CBH16375.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 246
Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 125/202 (61%), Gaps = 8/202 (3%)
Query: 7 IVPSILAADFSRLGEEISNITK---AGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSILA+DF++L E ++ A +H DVMDG FVPNIS G V++SLRS+
Sbjct: 23 IAPSILASDFAQLLSECQSVLSPEGGAADWLHVDVMDGHFVPNISIGMCVVQSLRSHLQD 82
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VF D H M+S D + +A AG +TFH E+ + R I A G GVA+ P+TP
Sbjct: 83 VFLDVHCMVSDPDRWVEEMAKAGATQMTFHVEAVADPKAVARHIRAAGMLCGVALKPKTP 142
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V+ + ++++E IDM+L+MTV PGFGGQ ++ +PK+ + +A ++++VDGG+
Sbjct: 143 VSSVLNLVEEQLIDMVLVMTVEPGFGGQSFMQDMMPKVEELRARF--PCLNIQVDGGIGP 200
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
I + +AGA+++V G+S F
Sbjct: 201 GTIDAPARAGANVIVAGTSIFR 222
>gi|313113099|ref|ZP_07798730.1| putative ribulose-phosphate 3-epimerase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624586|gb|EFQ07910.1| putative ribulose-phosphate 3-epimerase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 223
Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 122/216 (56%), Gaps = 2/216 (0%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-FDC 67
PS+ DF ++I + G + H D+MDG +VPN+ F +++ L+ ++ D
Sbjct: 7 PSLANCDFLNFRDQIFQLVDGGCQWFHIDIMDGHYVPNLCFPVRLVKELKQTFPAIQMDV 66
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLM++ ++I + ++G D ++FH +S+P RR L I A G K G+ INP P+++LE
Sbjct: 67 HLMVTDPMTYIAPLRESGADWVSFHLDSTPFARRGLAAIRAQGMKAGIVINPSQPISLLE 126
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+ID +D I++MTV PG+ GQ+ + ++ ++ Q L G R I + +DGGV +
Sbjct: 127 PLIDFVDYIVLMTVEPGYAGQRFLSDSLSRLEQLVQLRGNRPIPISIDGGVDMYHAAECA 186
Query: 188 QAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSALA 222
+ GA + V G + FNQ IS A R + SA A
Sbjct: 187 RRGAQIFVTGIYTVFNQPDNISAACRRFQREISAAA 222
>gi|195172776|ref|XP_002027172.1| GL20105 [Drosophila persimilis]
gi|194112985|gb|EDW35028.1| GL20105 [Drosophila persimilis]
Length = 221
Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 128/222 (57%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL AD + L E + GA +H DVMDG FVPN++FG +++SLR+
Sbjct: 1 MSVKAKIGPSILNADLANLAAESKKLLDNGADYLHLDVMDGNFVPNLTFGHPMVKSLRNK 60
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I+ +ADAG ++ TFH E + + R I G + G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWISPMADAGVNLYTFHIEPVDDVYKVSRLIQEAGMQVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T VA LE I D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTKVADLEKYISIADVVLVMTVEPGFGGQSFMADMMPKVEWLRQ--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I+ ++GA+++V G++ + K + D+ +S L
Sbjct: 179 PKTIECCAKSGANMIVSGTAVVGATDQRQVIKDMRDVVQSYL 220
>gi|6322341|ref|NP_012414.1| Rpe1p [Saccharomyces cerevisiae S288c]
gi|1173139|sp|P46969|RPE_YEAST RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|609674|emb|CAA58554.1| Ribulose-5-Phosphate-Epimerase [Saccharomyces cerevisiae]
gi|1008313|emb|CAA89415.1| POS18 [Saccharomyces cerevisiae]
gi|45269607|gb|AAS56184.1| YJL121C [Saccharomyces cerevisiae]
gi|151945007|gb|EDN63262.1| D-ribulose-5-phosphate 3-epimerase [Saccharomyces cerevisiae
YJM789]
gi|190409386|gb|EDV12651.1| D-ribulose-5-Phosphate 3-epimerase [Saccharomyces cerevisiae
RM11-1a]
gi|256272132|gb|EEU07132.1| Rpe1p [Saccharomyces cerevisiae JAY291]
gi|285812783|tpg|DAA08681.1| TPA: Rpe1p [Saccharomyces cerevisiae S288c]
gi|290771113|emb|CAY80664.2| Rpe1p [Saccharomyces cerevisiae EC1118]
gi|323337050|gb|EGA78306.1| Rpe1p [Saccharomyces cerevisiae Vin13]
gi|323347943|gb|EGA82202.1| Rpe1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354405|gb|EGA86244.1| Rpe1p [Saccharomyces cerevisiae VL3]
Length = 238
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 124/233 (53%), Gaps = 25/233 (10%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-------- 58
I PSILA+DF+ LG E + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65
Query: 59 -----SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ FDCH+M+ + + ++ A G D TFH E++ ++ I + G K
Sbjct: 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
AI P T V +L ++ +DM L+MTV PGFGGQ+ +E +PK+ +A ++++
Sbjct: 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKF--PHLNIQ 183
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN----------QKGEISYAKRLNDL 216
VDGG+ I +AGA+++V G+S F K E+S R DL
Sbjct: 184 VDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKEEVSKELRSRDL 236
>gi|86151749|ref|ZP_01069963.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315123998|ref|YP_004066002.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841378|gb|EAQ58626.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017720|gb|ADT65813.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 215
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 125/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEVAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ I+FH ES H R I + G + +NP T +
Sbjct: 61 LDVHLMVKDVSKFIDLFIPLKPKFISFHIESEVHPIRLCEYIRSQGIHPAIVLNPHTSID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ + +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L ++GAD+LV GS F+ Y ++ LK
Sbjct: 181 ASDLEESGADILVAGSYIFSSN---DYKTAISSLK 212
>gi|195474426|ref|XP_002089492.1| GE23827 [Drosophila yakuba]
gi|194175593|gb|EDW89204.1| GE23827 [Drosophila yakuba]
Length = 221
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 122/217 (56%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR+ +
Sbjct: 6 KIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKIKTAF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+ + I +ADAG ++ TFH E + + R + G K G+AI P T V
Sbjct: 66 FETHMMVQKPEQWIEPMADAGVNLYTFHVEPVQDVVKVCRQVQESGMKVGLAIKPGTEVQ 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE + D++L+MTV PGFGGQ + +PK++ + ++ +EVDGGV + I
Sbjct: 126 ELEKYVSIADVVLVMTVEPGFGGQSFMGDMMPKVKWLRD--NYPNLDIEVDGGVGPKTIH 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AGA+++V G++ + + + D+ S L
Sbjct: 184 CCAEAGANMIVSGTAVVGASDQAQVIREMRDVVHSYL 220
>gi|257866469|ref|ZP_05646122.1| ribulose-phosphate 3 epimerase [Enterococcus casseliflavus EC30]
gi|257873016|ref|ZP_05652669.1| ribulose-phosphate 3 epimerase [Enterococcus casseliflavus EC10]
gi|257800427|gb|EEV29455.1| ribulose-phosphate 3 epimerase [Enterococcus casseliflavus EC30]
gi|257807180|gb|EEV36002.1| ribulose-phosphate 3 epimerase [Enterococcus casseliflavus EC10]
Length = 220
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 1/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ ADFS L +E++ + A H DVMDG FVPN G I ++ +S+++ D
Sbjct: 6 LCPSMMCADFSMLKDEVAALQAAKIDIFHLDVMDGRFVPNFGMGLQDIEAICKWSETLVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++ AD G DII FHPE+ H R++ I GK+ G+AINP T VA++
Sbjct: 66 VHLMIEDPGAYVEKFADMGVDIIYFHPEADRHPTRTINKIKQKGKQAGIAINPGTSVAMI 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E+++ ID +++MTV+PGF GQ + KI+Q A+ + L DG ++ + L
Sbjct: 126 EELLPLIDYVMVMTVDPGFSGQAYLTHVEGKIKQLAAVKERYFYQLMADGAISPAVMTRL 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G D V+G+S K E SY + ++ K+
Sbjct: 186 SALGVDGFVLGTSALFGKEE-SYQELISIYKEE 217
>gi|183221046|ref|YP_001839042.1| ribulose-5-phosphate 3-epimerase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911140|ref|YP_001962695.1| pentose-5-phosphate-3-epimerase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775816|gb|ABZ94117.1| Pentose-5-phosphate-3-epimerase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779468|gb|ABZ97766.1| Ribulose-5-phosphate 3-epimerase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 220
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 118/216 (54%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILAA + L E+ K IH DVMDG FVP ISFG + ++S++D
Sbjct: 1 MKISASILAAKLTGLATELPTYKKESIDLIHIDVMDGNFVPQISFGEAFTKEVKSHTDIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+S+ + H+ D ITFH E++ R I G + GV++NP+TP
Sbjct: 61 LDVHLMVSNPELHVPKYFDLKPYCITFHIETTNFSVRLAEEIKKQGIRVGVSLNPQTPPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++ +D++L+MTV+PGF GQ ++S KI + L I LEVDGGV N++
Sbjct: 121 SISQILPYLDLVLLMTVDPGFYGQSFVKSGFEKIAAVRKLTKPYDIELEVDGGVNESNME 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L + G D+ VVGS + + K+L +L S
Sbjct: 181 ELAKLGVDITVVGSGLYKTGDPNAQGKKLKELAASG 216
>gi|149234662|ref|XP_001523210.1| ribulose-phosphate 3-epimerase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452999|gb|EDK47255.1| ribulose-phosphate 3-epimerase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 230
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 120/216 (55%), Gaps = 12/216 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLR------S 59
I PSILA++F+ LG + G +H DVMDG FVPNISFG VI SLR S
Sbjct: 6 ISPSILASNFADLGCSCKRVVDTGDVDWLHLDVMDGHFVPNISFGPPVIESLRKQFPRDS 65
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
VFDCH+M+S + I IA AG D TFH E++ + I G K + I P
Sbjct: 66 NKPIVFDCHMMVSDPEEWIEAIAKAGGDSYTFHYEATKDPASVIAKIKKHGLKAAMGIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP+ ++ D++DM+L+MTV PGFGGQ+ + +PK+ + +++EVDGG+
Sbjct: 126 NTPIDVVYPFADDLDMVLVMTVEPGFGGQKFMADMMPKVETLRQKY--PHLNIEVDGGLG 183
Query: 180 SRNIKSLVQAGADLLVVGSSFF---NQKGEISYAKR 212
+K AGA+++V G+S F N K + K+
Sbjct: 184 KDTVKPAAVAGANVIVAGTSVFKAENPKEVTQFLKK 219
>gi|197098216|ref|NP_001126655.1| ribulose-phosphate 3-epimerase [Pongo abelii]
gi|75061668|sp|Q5R5Y2|RPE_PONAB RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Ribulose-5-phosphate-3-epimerase
gi|55732261|emb|CAH92834.1| hypothetical protein [Pongo abelii]
Length = 228
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + FH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ +AGA+++V GS+
Sbjct: 179 GPDTVHKCAEAGANMIVSGSA 199
>gi|289621478|emb|CBI52261.1| unnamed protein product [Sordaria macrospora]
Length = 251
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 123/235 (52%), Gaps = 35/235 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M P I PSIL+ADF+ LG + S GA +H D+MDG FVPN+++G ++ +R
Sbjct: 1 MAPKAIIAPSILSADFANLGHDCSKTIGQGADWLHVDIMDGHFVPNLTWGPPIVAKIRGH 60
Query: 59 ------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-------SPHIRRS--- 102
+ FDCH+MI+ + AGCD+ FH E+ SP +
Sbjct: 61 VEKPTEGFGKGTFDCHMMIAEPKKWVKEFKKAGCDLYCFHYEAAFSSAAESPEAKSDEKT 120
Query: 103 -----LRTIHAMGKKTGVAINPETPVAIL------EDVIDEIDMILIMTVNPGFGGQQLI 151
+R IH G G+A+ P T V +L ED + DM+LIMTV PGFGGQ+ +
Sbjct: 121 NPKELIRYIHDQGMLAGIALKPATSVDVLWEILESEDPKERPDMVLIMTVEPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
S +PK+ + + KR +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 ASELPKVAELR----KRYPELNIEVDGGLGPATIDQAADAGANVIVAGSAVFGAQ 231
>gi|195121434|ref|XP_002005225.1| GI19203 [Drosophila mojavensis]
gi|193910293|gb|EDW09160.1| GI19203 [Drosophila mojavensis]
Length = 221
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 122/217 (56%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL AD + L E + GA +H DVMDG FVPN++FG +++ LR++ ++
Sbjct: 6 KIGPSILNADLANLAAESQKLLDNGADYLHLDVMDGAFVPNLTFGHPMVKCLRNHIKEAF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+ + + I +ADAG ++ TFH E + R I G K G+AI P T V
Sbjct: 66 FETHMMVQNPEQWITPMADAGVNLYTFHVEPVKDVCSVTRKIQEAGMKVGLAIKPGTEVK 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E ID D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV + I
Sbjct: 126 EIEKYIDVADLVLVMTVEPGFGGQSFMADMMPKVEWLRN--NYPNLDIEVDGGVGPKTID 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AGA+ +V G++ + + ++ KS L
Sbjct: 184 CCAKAGANWIVSGTAVVGSADQRQVIGEMRNVVKSYL 220
>gi|237752713|ref|ZP_04583193.1| ribulose-phosphate 3-epimerase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376202|gb|EEO26293.1| ribulose-phosphate 3-epimerase [Helicobacter winghamensis ATCC
BAA-430]
Length = 211
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 126/213 (59%), Gaps = 6/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+A+F +L E+ I A +H DVMDG FVPN++ G V+ S+ S D
Sbjct: 3 VAPSILSANFGKLEAEVQAICAADCDFVHIDVMDGHFVPNLTLGPVVVESVVKASTKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A + ++FH E H R ++ I +G K V +NP T + +
Sbjct: 63 IHLMVQNNSFFVDLFAPFKPEFLSFHIEEEKHANRLVQKIRDLGIKPAVVLNPHTGIESI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNIK 184
E +++ +DM+L+M+VNPGFGGQ+ I + + KI++ K I +EVDGGV+S NI+
Sbjct: 123 EYLLEVVDMVLVMSVNPGFGGQKFIPNVLEKIKRLKDRIEIWNPKCLIEVDGGVSSANIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L +AG D++V GS F+ YA+++ LK
Sbjct: 183 LLREAGVDIVVAGSYVFSG----DYAQKIASLK 211
>gi|169335084|ref|ZP_02862277.1| hypothetical protein ANASTE_01491 [Anaerofustis stercorihominis DSM
17244]
gi|169257822|gb|EDS71788.1| hypothetical protein ANASTE_01491 [Anaerofustis stercorihominis DSM
17244]
Length = 227
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 2/196 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ + G+E+ + AG IHFDVMDG FV NI G ++ ++ +SD +F
Sbjct: 3 KIAASIMCGNALEYGDELDALKAAGVDMIHFDVMDGEFVNNIGMGLYMLEGMKKHSDMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ D + IA+AG + I H E+ H+ RS+ I G K GV +NP T + +
Sbjct: 63 DVHLMVVEPDVYYERIAEAGAEYICIHAEAVKHLHRSILRIKKAGAKAGVVLNPSTNLNV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L++VI EID++ +MTVNPG G++ I++ KI K + K + L EVDG + I
Sbjct: 123 LKEVIKEIDLVCLMTVNPGGSGEKFIQNQYKKIADLKEMKEKYNPDLLIEVDGNIGPETI 182
Query: 184 KSLVQAGADLLVVGSS 199
+AGAD+ V G+S
Sbjct: 183 PGCAKAGADVYVCGTS 198
>gi|219683793|ref|YP_002470176.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis AD011]
gi|219621443|gb|ACL29600.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis AD011]
gi|289178566|gb|ADC85812.1| Ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis BB-12]
Length = 224
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 131/223 (58%), Gaps = 7/223 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I+I PSIL+ADF L ++ I+ A +H DVMD FVPN++ G V++ + +
Sbjct: 3 TMDIKIAPSILSADFCNLERDLERISNA--DMVHVDVMDHHFVPNLTIGEPVVKRICEVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A+ G +TFH ++ R R +H MG + A+ P
Sbjct: 61 DLPVDVHLMIDDPDRWAPGYAERGAHSVTFHMGATHAPVRLARQLHDMGCEAWFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D+++E D ILIMTV PGFGGQ+ + + + K+R+ + I +R + +++VDGGV+
Sbjct: 121 PVEPIFDILEEFDTILIMTVEPGFGGQKFLANQMGKVRRLRDEITRRGLDTNIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ ++ QAGA++LV GS+ + G AK +N+++ +A A
Sbjct: 181 PKTAATVAQAGANILVAGSAVY---GAADPAKAINEIRDTAAA 220
>gi|158313557|ref|YP_001506065.1| ribulose-phosphate 3-epimerase [Frankia sp. EAN1pec]
gi|158108962|gb|ABW11159.1| Ribulose-phosphate 3-epimerase [Frankia sp. EAN1pec]
Length = 254
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 113/194 (58%), Gaps = 3/194 (1%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+LAADF R+ + + A +H DVMD FVPN++F D + +LR +D+ DCHLM
Sbjct: 1 MLAADFGRIADAARAVA-GHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDTPLDCHLM 59
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
I + D A+ G +T H E+ I R+ I A G +TG+A+ P TPV D +
Sbjct: 60 IENPDRWAPGFAERGAANVTIHAEAVGDIARTTDAIRAAGARTGLAVKPATPVEHYLDDL 119
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQ 188
D++L+MT+ PGFGGQ+ ++ +PKI A+ LI +R + L++DGGV I+ +
Sbjct: 120 HRFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDERGLDLWLQIDGGVNRETIERSAE 179
Query: 189 AGADLLVVGSSFFN 202
AG D+ V G++ F
Sbjct: 180 AGVDVFVAGTAVFG 193
>gi|164659476|ref|XP_001730862.1| hypothetical protein MGL_1861 [Malassezia globosa CBS 7966]
gi|159104760|gb|EDP43648.1| hypothetical protein MGL_1861 [Malassezia globosa CBS 7966]
Length = 266
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 4/201 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PS+++ PS+LA+D L E + + + GA +H DVMDG FV +I G I S+R +
Sbjct: 2 PSVKVAPSLLASDLGNLSYECNRMIRCGADWLHMDVMDGHFVSSIVMGPPAIESVRKHVP 61
Query: 63 SVF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
F DCH+M+S I IA+AG TFH ES+ +R I A G + +AINP T
Sbjct: 62 EAFMDCHMMVSEPLKWIQPIANAGGSSYTFHLESTNDPVEVIRQIKASGMRASIAINPGT 121
Query: 122 PVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
P + D I +DMIL+MTV PG GGQ+ I +PK+ + +A + + +EVDGGV
Sbjct: 122 PATEISDEIAHAVDMILVMTVWPGAGGQKFIAECVPKVAELRARYPE--LDVEVDGGVGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
+ I + AGA+++V G++ F
Sbjct: 180 KTICACANAGANVIVAGTAVF 200
>gi|323359996|ref|YP_004226392.1| pentose-5-phosphate-3-epimerase [Microbacterium testaceum StLB037]
gi|323276367|dbj|BAJ76512.1| pentose-5-phosphate-3-epimerase [Microbacterium testaceum StLB037]
Length = 223
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 116/202 (57%), Gaps = 4/202 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + +I PSILAADF + E++ I AGA +H DVMD FVPN++FG ++ ++ S
Sbjct: 3 TDAPRINPSILAADFVNMEAELARI--AGADFVHVDVMDNHFVPNLTFGPQMVGRIQETS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI D A+ G +TFH E++ R + ++G + GVA+ P T
Sbjct: 61 PVPLDVHLMIDDPDRWAPAYAELGAASVTFHLEAAASPIALARQLRSLGARAGVAVKPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
PV L + ++E D IL+MTV PGFGGQ + T+PK+R +R ++ L+VDGG+
Sbjct: 121 PVENLFEALNEFDQILVMTVEPGFGGQSFMPETMPKLRALADEAKRRGSNVWLQVDGGIG 180
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
I +AGAD V GS+ F
Sbjct: 181 ESTIAQAAEAGADTFVAGSAVF 202
>gi|95767565|gb|ABF57316.1| ribulose-5-phosphate-3-epimerase [Bos taurus]
Length = 220
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 114/193 (59%), Gaps = 4/193 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDSVFD 66
PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR D FD
Sbjct: 1 PSILNSDLASLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFD 60
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+S + + +A AG + TFH E++ + ++ I G K G+AI P T V L
Sbjct: 61 MHMMVSRPEQWVKPMAVAGANQYTFHLEATDNPGALIKDIRENGMKVGLAIKPGTSVEYL 120
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV I
Sbjct: 121 APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGVGPDTIHKC 178
Query: 187 VQAGADLLVVGSS 199
+AGA+++V GS+
Sbjct: 179 AEAGANMIVSGSA 191
>gi|255930803|ref|XP_002556958.1| Pc12g00550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581577|emb|CAP79682.1| Pc12g00550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 254
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 126/237 (53%), Gaps = 37/237 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+A+F+ LG + S + GA +H D+MDG FVPN++ G V+ +R
Sbjct: 1 MAPPAIIAPSILSANFADLGHDCSKKMEQGADWLHVDIMDGHFVPNMTIGCPVVSQIRGC 60
Query: 61 SD--------SVFDCHLMISSIDSHINIIADAGCDIITFHPE------------------ 94
D FDCH+MI + AGCD+ FH E
Sbjct: 61 VDRPSEPCGRGTFDCHMMIMEPHKWVVEFKKAGCDLYCFHYEAAVSSVAATDPTDKETTA 120
Query: 95 -SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGG 147
+SP ++ +R IH G + G+AI P+TPV +L D+I + DM+L+MTV+PGFGG
Sbjct: 121 RTSP--KQLIRYIHEQGMQAGIAIKPDTPVDVLWDIIESEDPAERPDMVLVMTVHPGFGG 178
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
Q+ + S +PK+ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 179 QKFMASELPKVAALRARC--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAIFGAQ 233
>gi|229542782|ref|ZP_04431842.1| ribulose-phosphate 3-epimerase [Bacillus coagulans 36D1]
gi|229327202|gb|EEN92877.1| ribulose-phosphate 3-epimerase [Bacillus coagulans 36D1]
Length = 239
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 123/205 (60%), Gaps = 3/205 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ AD RL E I + +AG H DVMDG FVPN + G D IR++R +D
Sbjct: 3 KIGPSLMCADLGRLAENIKEMDEAGVDFYHLDVMDGLFVPNFTLGPDFIRTVRKLTDKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + I++ AD G D+I+ H E++ +++ +L I G K GVAINP TP+ +
Sbjct: 63 DTHLMIKQPERFIDLFADCGSDMISIHAEATDNLQGALARIKNKGLKAGVAINPATPLDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V D D +++MTVNPGF GQ+ I + KI + I K +I +EVDG + + I
Sbjct: 123 LDYVYDVTDYVVVMTVNPGFAGQKFIPAVYDKIARLHETITRNKFNIEIEVDGNIGASTI 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEI 207
+ + GA + V G+S F ++G +
Sbjct: 183 PACKENGATMYVCGTSAVFKKEGTL 207
>gi|295425217|ref|ZP_06817920.1| ribulose-phosphate 3-epimerase [Lactobacillus amylolyticus DSM
11664]
gi|295064993|gb|EFG55898.1| ribulose-phosphate 3-epimerase [Lactobacillus amylolyticus DSM
11664]
Length = 220
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 132/211 (62%), Gaps = 5/211 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M + I PSIL A+ L +EI T AG + H D+MDG FVPN+SFG ++ ++
Sbjct: 1 MGDKMLIAPSILNANNLTLKDEIKRATNAGITRFHIDIMDGHFVPNLSFGPQLVSDFKTE 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPH-IRRSLRTIHAMGKKTGVAI 117
+ + + HLM ++ I AG D++ FH E+ P+ ++ L + + G K G+ +
Sbjct: 61 FPITEAEIHLMSNNPKVLIPAFVKAGADLLEFHYEAMQPNEVKYWLDYLKSNGVKAGLVL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
NP+TP+ ++E ++ID +L+MTV+PGFGGQ+ +E++ +I++A+ L+GK I++EVDGG
Sbjct: 121 NPDTPIPVVEQFKNQIDQLLLMTVHPGFGGQKFLENSASRIKEARELVGK-DIAIEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ + + AGA++ V GS F +KG+I+
Sbjct: 180 INQQTARIAKDAGANVFVAGSYLF-EKGDIA 209
>gi|327260711|ref|XP_003215177.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Anolis
carolinensis]
Length = 228
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + + GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLAALGAECTRMLDCGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
FD H+M++ + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQQPFFDMHMMVAKPEQWVKSMAVAGANQYTFHIEATDNAGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I +AGA+++V GS+
Sbjct: 179 GPDTIHKCAEAGANMIVSGSA 199
>gi|183601674|ref|ZP_02963044.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis HN019]
gi|241190827|ref|YP_002968221.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196233|ref|YP_002969788.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183219280|gb|EDT89921.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis HN019]
gi|240249219|gb|ACS46159.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250787|gb|ACS47726.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295793816|gb|ADG33351.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis V9]
Length = 221
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 130/220 (59%), Gaps = 7/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF L ++ I+ A +H DVMD FVPN++ G V++ + +D
Sbjct: 3 IKIAPSILSADFCNLERDLERISNA--DMVHVDVMDHHFVPNLTIGEPVVKRICEVTDLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D A+ G +TFH ++ R R +H MG + A+ P PV
Sbjct: 61 VDVHLMIDDPDRWAPGYAERGAHSVTFHMGATHAPVRLARQLHDMGCEAWFAVRPAEPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ D+++E D ILIMTV PGFGGQ+ + + + K+R+ + I +R + +++VDGGV+ +
Sbjct: 121 PIFDILEEFDTILIMTVEPGFGGQKFLANQMGKVRRLRDEITRRGLDTNIQVDGGVSPKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
++ QAGA++LV GS+ + G AK +N+++ +A A
Sbjct: 181 AATVAQAGANILVAGSAVY---GAADPAKAINEIRDTAAA 217
>gi|124025511|ref|YP_001014627.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str.
NATL1A]
gi|123960579|gb|ABM75362.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str.
NATL1A]
Length = 250
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI+PS+L AD++ +G+ + ++ AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 16 VQIIPSVLPADWANMGQCVKDLELAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCSVP 75
Query: 65 FDCHLMISSIDSHI----NIIADAGCD----IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S + + A G + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLEGYVEASKGANGEPGVVIAHAEANVHLHRILGKIRQLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEV 174
+NP TP+ +++DV+D +D +L+MTVNPGFGGQ I + + KI Q + I ++ +EV
Sbjct: 136 LNPHTPMDMVKDVLDMVDHVLVMTVNPGFGGQAYIPTMLNKITQLRKTILDNGYNVDIEV 195
Query: 175 DGGVTS-RNIKSLVQAGADLLVVGSSFF 201
DGG+ + ++ AGA+ + GS F
Sbjct: 196 DGGIKADWSLSQCCAAGANCFIAGSGMF 223
>gi|255026066|ref|ZP_05298052.1| hypothetical protein LmonocytFSL_06385 [Listeria monocytogenes FSL
J2-003]
Length = 209
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 1/199 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS++ ADFS L E+ + KAG+ H D+MDG FVP+ G +R + + D
Sbjct: 6 ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQKTQKLVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ + AD G DII HPE+ H R+L I GKK G+AINP T +A +
Sbjct: 66 VHLMIMNPGDYVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATI 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ +D +++MTVNPGF GQ+ ++ KI + L + + VDG ++ I L
Sbjct: 126 KELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELKKDYTFEIMVDGAISPEKISKL 185
Query: 187 VQAGADLLVVGSS-FFNQK 204
Q G V+G+S F +K
Sbjct: 186 SQLGVKGFVLGTSALFGKK 204
>gi|256379227|ref|YP_003102887.1| ribulose-phosphate 3-epimerase [Actinosynnema mirum DSM 43827]
gi|255923530|gb|ACU39041.1| ribulose-phosphate 3-epimerase [Actinosynnema mirum DSM 43827]
Length = 216
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +E + ++ GA +H DVMD FVPN++ G V++SLR +D D
Sbjct: 2 IAPSILSADFARLADEAAAVS--GADWLHVDVMDAHFVPNLTLGLPVVKSLRKATDIPLD 59
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI D A+AG +T H E++ + + + A G + G++I P T + +
Sbjct: 60 CHLMIEDPDRWAIGYAEAGAHNVTVHAEAAADPVKLAKDLRAAGSRAGLSIKPGTSLDSV 119
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
DV+ D +L+M+V PGFGGQ + + K+R A+ L+ G + +E+DGG+ + I
Sbjct: 120 VDVLKHYDTLLVMSVEPGFGGQSFMPEVLDKVRTARNLVDTGHLKLVIEIDGGINADTIA 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ ++ + L L +A
Sbjct: 180 QAAEAGVDCFVSGSAVYDAADPAKALESLRGLAAAA 215
>gi|255321504|ref|ZP_05362662.1| ribulose-phosphate 3-epimerase [Campylobacter showae RM3277]
gi|255301360|gb|EET80619.1| ribulose-phosphate 3-epimerase [Campylobacter showae RM3277]
Length = 215
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF L EI I +AGA +H DVMDG FVPN++ G V+ ++ +
Sbjct: 1 MYIAPSILSADFGNLKAEIEAICEAGADLVHVDVMDGHFVPNLTIGPVVVNAVAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + ++ ++FH E H R + I + G + +NP TPV+
Sbjct: 61 LDIHLMVQNNTFFADLFLPLKPKFLSFHIEEEKHPLRLIDHIRSHGVGPAIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +++E+DM+L+M+VNPGFGGQ+ I S + K + +I +++ +EVDGGVT N
Sbjct: 121 AIEHIVNEVDMVLLMSVNPGFGGQKFIPSVLEKALSLREMIERKNAKCMIEVDGGVTGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L +AG D++V GS F+ SY + LK
Sbjct: 181 VAQLDEAGVDIVVAGSYIFSSN---SYEHSIRSLK 212
>gi|320527287|ref|ZP_08028472.1| ribulose-phosphate 3-epimerase [Solobacterium moorei F0204]
gi|320132311|gb|EFW24856.1| ribulose-phosphate 3-epimerase [Solobacterium moorei F0204]
Length = 217
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 115/201 (57%), Gaps = 5/201 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ D+S + E+ + + A+ +HFDVMDG FV N++FG D+++ S D
Sbjct: 3 VAPSVLSLDYSHMTEQCELLNSSKAEWMHFDVMDGHFVKNLTFGPDILKGFVKLSPLFKD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAINPETPV 123
HLM++ ++ +AG D ITFH E+ I+ + IH GKK G+ + P+TP+
Sbjct: 63 VHLMVTDPKMFADVFINAGADQITFHVETIYDKEEIKALAKHIHEQGKKAGLTLKPQTPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+L+ + + D+ LIM+V PGFGGQ+ + + +IR + + + +EVDGG+
Sbjct: 123 EVLKPFLHDFDLFLIMSVEPGFGGQKFMPEALERIRTLRTWLNDEGLDTHIEVDGGINEE 182
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
+AGAD+LV GS F
Sbjct: 183 TGALCAEAGADVLVAGSYVFK 203
>gi|170049894|ref|XP_001858610.1| ribulose-phosphate 3-epimerase [Culex quinquefasciatus]
gi|167871570|gb|EDS34953.1| ribulose-phosphate 3-epimerase [Culex quinquefasciatus]
Length = 224
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSD 62
S +I PSIL AD S+L EE + GA +H DVMDG FVPN++FG V++ LR+ D
Sbjct: 5 SAKIGPSILNADLSQLHEESQRLLDNGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIKD 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPET 121
+ F+ H+M+ + I +ADAG + TFH E + R + G K G+AI P T
Sbjct: 65 AFFETHMMVQAPQQWIEPMADAGVNQYTFHIEPVMDSVVDICRKVQEAGMKVGLAIKPGT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +++ I DM+LIMTV PGFGGQ+ + +PK++ + ++ +EVDGGV
Sbjct: 125 PVEAVKEFIAIADMVLIMTVEPGFGGQKFMADMMPKVQWLRE--NYPNLDIEVDGGVGLA 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + +AGA+++V G++ + + ++L
Sbjct: 183 TIDACAKAGANMIVAGTAIIRADDQAAVIRQLK 215
>gi|300858537|ref|YP_003783520.1| ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
FRC41]
gi|300685991|gb|ADK28913.1| ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
FRC41]
gi|302206249|gb|ADL10591.1| Ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
C231]
gi|302330807|gb|ADL21001.1| Ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
1002]
gi|308276491|gb|ADO26390.1| Ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
I19]
Length = 224
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFS+LGEEI+ ++ A IH D+MDG FVPN+SFGAD+ ++ + ++ D
Sbjct: 10 IAPSILSADFSKLGEEIAEVSHA--DWIHVDIMDGHFVPNLSFGADITKAAHASTEQPLD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ DAG + FH E++ I + G + G ++ P T +
Sbjct: 68 VHLMIEEPEKWVDHYIDAGASCVIFHVEATSDPSALAHHIRSRGVRAGFSLRPGTTIEPY 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ + D +L+M+V PGFGGQ+ + + K+R+ + I R++ +E+DGG+++ I
Sbjct: 128 LPQLSDFDQVLVMSVEPGFGGQKFMPDQLEKVRKLRQEIDSRNLDVIIEIDGGISADTIA 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ + K + L +L + A
Sbjct: 188 QAAEAGCDAFVAGSAVYKHKDRNAAIDELRELAQRA 223
>gi|313681498|ref|YP_004059236.1| ribulose-5-phosphate 3-epimerase [Sulfuricurvum kujiense DSM 16994]
gi|313154358|gb|ADR33036.1| ribulose-5-phosphate 3-epimerase [Sulfuricurvum kujiense DSM 16994]
Length = 213
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 124/213 (58%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L ++ I AG +H DVMDG FVPN++ G V+ ++ + D
Sbjct: 3 VAPSVLSADFGNLARDVRAICDAGCDLVHVDVMDGHFVPNLTIGPVVVSAIAKAATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A + I+FH E + R ++ I ++G K + +NP TP +
Sbjct: 63 IHLMVQNNTFFVDLFAPLKPEYISFHIEEEKNPHRLIQHIRSLGIKPAIVLNPHTPAEAI 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E ++ ++DM+L+M+VNPGFGGQ+ I + + KI++ KAL + +E+DGGV S NI
Sbjct: 123 EYLLGDLDMVLVMSVNPGFGGQKFIPTVVEKIKRLKALRDRINPECMIEIDGGVGSSNIA 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L +AG D+ V GS F G Y ++ L+
Sbjct: 183 VLKEAGVDICVAGSYVF---GADDYKTAIDSLR 212
>gi|284008882|emb|CBA75698.1| ribulose-phosphate 3-epimerase [Arsenophonus nasoniae]
Length = 186
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 108/168 (64%), Gaps = 3/168 (1%)
Query: 39 MDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
MD +VPN++FG + ++LR Y + D HLM+ +D I A AG ITFH E+S
Sbjct: 1 MDNHYVPNLTFGPMICKALRDYGIKAPIDVHLMVKPVDRLIPDFAKAGATYITFHAEASE 60
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
HI R+L+ I G K G+A NP TP+ L+ VID++DMILIM+VNPGFGGQ I T+ K
Sbjct: 61 HIDRTLQLIKDNGCKAGLAFNPATPLNYLDYVIDKLDMILIMSVNPGFGGQSFIPQTLNK 120
Query: 158 IRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
+RQ + +I +I LEVDGGV NI ++ AGAD V GS+ FNQ
Sbjct: 121 LRQVRKMIDSNGYNIRLEVDGGVNVNNIINVANAGADTFVAGSAIFNQ 168
>gi|261366622|ref|ZP_05979505.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
gi|282571442|gb|EFB76977.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
Length = 218
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 123/213 (57%), Gaps = 4/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
+I SIL+ADF+ L + + + + GA +H DVMDG FVPNIS+GA V++ L ++ D+
Sbjct: 3 KIAASILSADFANLQHDCTRLLQEGADLLHIDVMDGHFVPNISYGAPVLQCLHKALPDAY 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS-LRTIHAMGKKTGVAINPETPV 123
+D HLMIS + A AG +ITFH E+ P + I A G + G++I P TPV
Sbjct: 63 YDVHLMISDPARYAADFAKAGAGLITFHLEAVPDTAEEVIAAIRATGCQVGISIRPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ +D+IL+M+V PGFGGQ+ + T ++ A +R + LEVDGG+ +
Sbjct: 123 EAAFPYLGVVDLILVMSVEPGFGGQKFLPGTPQRLAALDAERKRRGCATILEVDGGINAE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
VQAGAD LV GSS F+ + + L+
Sbjct: 183 TGPLCVQAGADWLVAGSSLFHAADPAAVVRLLH 215
>gi|118093257|ref|XP_001232388.1| PREDICTED: hypothetical protein [Gallus gallus]
Length = 228
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E S + GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLAALGAECSRMLDCGADYLHLDVMDGHFVPNITFGHPVVESLRKR 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D F+ H+M++ + + +A AG + TFH E++ ++ I G K G+AI
Sbjct: 61 LGQDPFFNMHMMVARPEQWVQPMAVAGANQYTFHLEATDGPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK++ + S+ +EVDGGV
Sbjct: 121 PGTTVEQLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVQWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I +AGA+++V GS+
Sbjct: 179 GPDTIHKCAEAGANMIVSGSA 199
>gi|302525887|ref|ZP_07278229.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
gi|302434782|gb|EFL06598.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
Length = 227
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 116/203 (57%), Gaps = 5/203 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAG---AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSIL+ADF++LGEEI+ + G A +H DVMD FVPN++ G V++SL +D
Sbjct: 6 IAPSILSADFAKLGEEIAAVAHPGETRADWVHVDVMDAHFVPNLTLGLPVVQSLLKSTDL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H E++ + + A G K G++I P TP+
Sbjct: 66 PLDCHLMIDDPDRWAIGYAEAGAYNVTVHVEAAKDPVMLAKNLRAAGAKAGLSIKPGTPL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
+ + D +L+M+V PGFGGQ I + K+R A+ L+ G + +E+DGG+ S
Sbjct: 126 EPHLETLKHYDTLLVMSVEPGFGGQSFIADVLEKVRTARRLVDTGHLKLVVEIDGGINSD 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
I+ +AG D V GS+ + +
Sbjct: 186 TIEQAAEAGVDCFVAGSAVYGAE 208
>gi|320093627|ref|ZP_08025511.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319979415|gb|EFW10893.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 220
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 7/212 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E+ I+ GA H DVMD FVPN+S+G V ++ D
Sbjct: 5 ISPSILNCDIADLRGELEKIS--GADVAHVDVMDNHFVPNLSWGLPVAEAVVKTGILPVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AGC +TFH E++ R R + +G K G+ + P T +A
Sbjct: 63 AHLMIEDPDRWAPQYAEAGCQSVTFHAEAAQAPVRLARELRRIGSKVGLGLRPATDIAPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
D++ E DMIL+MTV PGFGGQ +ES +PKIR+ +A + +S++VDGGV+ I+
Sbjct: 123 VDLLGEFDMILVMTVEPGFGGQSFLESMLPKIRRTRAAVNASGLEVSIQVDGGVSRSTIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKG---EISYAKRL 213
+AGAD V GS+ F E+ +RL
Sbjct: 183 LAAEAGADNFVAGSAVFRADDALEEVEVLRRL 214
>gi|224283097|ref|ZP_03646419.1| ribulose-phosphate 3-epimerase [Bifidobacterium bifidum NCIMB
41171]
gi|310287465|ref|YP_003938723.1| Ribulose-phosphate 3-epimerase [Bifidobacterium bifidum S17]
gi|311064380|ref|YP_003971105.1| ribulose-phosphate 3-epimerase Rpe [Bifidobacterium bifidum
PRL2010]
gi|313140246|ref|ZP_07802439.1| pentose-5-phosphate-3-epimerase [Bifidobacterium bifidum NCIMB
41171]
gi|309251401|gb|ADO53149.1| Ribulose-phosphate 3-epimerase [Bifidobacterium bifidum S17]
gi|310866699|gb|ADP36068.1| Rpe Ribulose-phosphate 3-epimerase [Bifidobacterium bifidum
PRL2010]
gi|313132756|gb|EFR50373.1| pentose-5-phosphate-3-epimerase [Bifidobacterium bifidum NCIMB
41171]
Length = 221
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 129/221 (58%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SIQI PSIL+ADF L ++ I A A +H DVMD FVPN++ G +++ + +D
Sbjct: 2 SIQIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVKRICEVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G I+FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R +S ++VDGGV+ +
Sbjct: 120 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLSTHIQVDGGVSPK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G S A+ ++ ++ A A
Sbjct: 180 TAHIVAEAGADVLVAGSAVY---GAESPAQAIDQIRDKAAA 217
>gi|209731036|gb|ACI66387.1| Ribulose-phosphate 3-epimerase [Salmo salar]
Length = 198
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 114/197 (57%), Gaps = 4/197 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S +I PSIL++D + LG E + + GA +H DVMDG FVPNI+FG ++ LRS
Sbjct: 1 MSYSAKIGPSILSSDLACLGSECVRMMECGADYLHLDVMDGHFVPNITFGHPMVECLRSC 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH ES+ + ++ I G K G+AI
Sbjct: 61 VGPDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLESTTNAGNLIKEIRETGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ ++ S+ +EVDGGV
Sbjct: 121 PGTTVEELAPWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLV 195
I +AGA V
Sbjct: 179 GPSTIHKCAEAGAHWTV 195
>gi|305681310|ref|ZP_07404117.1| ribulose-phosphate 3-epimerase [Corynebacterium matruchotii ATCC
14266]
gi|305659515|gb|EFM49015.1| ribulose-phosphate 3-epimerase [Corynebacterium matruchotii ATCC
14266]
Length = 218
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 4/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ LG +I + A A IH D+MDG FVPN+SFGAD+ + R + D
Sbjct: 6 ISPSILSADFTNLGADIQAV--ANADWIHVDIMDGHFVPNLSFGADITAAARRATTQPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ AG D I FH E++ R I A G + G ++ P TP+
Sbjct: 64 VHLMIDNPERWVDNYIKAGADHIIFHVEATDDPVSLARHIRAAGVQAGFSLRPGTPIEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+DE D++LIM+V PGFGGQ+ + + K+R + I R ++ +E+DGG+++ I
Sbjct: 124 LPTLDEFDLVLIMSVEPGFGGQKFMPDQLDKVRALRHEITTRGLATLIEIDGGISADTIA 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+AG D V GS+ F + L L
Sbjct: 184 QAAEAGCDAFVAGSAIFTNDDPAAAVTNLRTL 215
>gi|72382012|ref|YP_291367.1| ribulose-5-phosphate 3-epimerase [Prochlorococcus marinus str.
NATL2A]
gi|72001862|gb|AAZ57664.1| ribulose-5-phosphate 3-epimerase [Prochlorococcus marinus str.
NATL2A]
Length = 250
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI+PS+L AD++ +G+ + ++ AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 16 VQIIPSVLPADWANMGQCVKDLELAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCSVP 75
Query: 65 FDCHLMISSIDSHI----NIIADAGCD----IITFHPESSPHIRRSLRTIHAMGKKTGVA 116
F+ LM+S + + A G + ++ H E++ H+ R L I +G VA
Sbjct: 76 FETQLMVSQYNCETMLEGYVEASKGANGEPGVVIAHAEANVHLHRILGKIRQLGGSPSVA 135
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEV 174
+NP TP+ +++DV+D +D +L+MTVNPGFGGQ I + + KI Q + I + +EV
Sbjct: 136 LNPHTPMDMVKDVLDMVDHVLVMTVNPGFGGQAYIPTMLNKITQLRKTILDNGYDVDIEV 195
Query: 175 DGGVTS-RNIKSLVQAGADLLVVGSSFF 201
DGG+ + ++ AGA+ + GS F
Sbjct: 196 DGGIKADWSLSQCCAAGANCFIAGSGMF 223
>gi|294101397|ref|YP_003553255.1| ribulose-phosphate 3-epimerase [Aminobacterium colombiense DSM
12261]
gi|293616377|gb|ADE56531.1| ribulose-phosphate 3-epimerase [Aminobacterium colombiense DSM
12261]
Length = 243
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 127/222 (57%), Gaps = 12/222 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVF 65
+ PS+L+AD + + I+ + + +H D+MDG FVPN+S+G + ++LRS Y +V
Sbjct: 16 VAPSLLSADILNMEKSIT-LLQGTHDWLHLDIMDGHFVPNLSYGPGLAKALRSSYPSTVI 74
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + I+ A A D +T H E++PH+ R L I +G + GVA+NP TPV
Sbjct: 75 DAHLMVVPPEDFIDAFAAAKPDYLTVHVEATPHLHRVLSRIRDLGCRPGVALNPATPVEW 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI------RQAKALIGKRSISLEVDGGVT 179
+ V+ +D++L+M+VNPGFGGQ I T+ K R A L S +++DGG+
Sbjct: 135 IYPVLPMVDLVLVMSVNPGFGGQSFISETLQKTVDLYRHRVAHNL----SFLIQMDGGIG 190
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I+ +V +G D++V+GSS F + L K A+
Sbjct: 191 RETIREVVSSGCDVVVMGSSIFGTPDPAETIRELRACVKGAV 232
>gi|89892397|gb|ABD78982.1| HI0566-like protein [Haemophilus influenzae]
Length = 162
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
TP++ L+ V+D++D++L+M+VNPG S I +I
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGIWWTIFYSSNIEEI 158
>gi|295672155|ref|XP_002796624.1| ribulose-phosphate 3-epimerase [Paracoccidioides brasiliensis Pb01]
gi|226283604|gb|EEH39170.1| ribulose-phosphate 3-epimerase [Paracoccidioides brasiliensis Pb01]
Length = 270
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 132/265 (49%), Gaps = 52/265 (19%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVI------ 54
MTP I PSIL+ADF+ LG S++ K+ + IH D+MDG FVPNI+FGA V+
Sbjct: 1 MTPPTIIAPSILSADFAALGSACSHLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRLH 60
Query: 55 --RSLRSYSDSVFDCHLMISSID-------------------SHINIIADAGCDIITFHP 93
R R FDCH+MIS +D + DAGCD+ FH
Sbjct: 61 VERPSRRLGKGTFDCHMMISELDRVCSTNIAGGQLVTNTPPQKWVKDFKDAGCDLYCFHY 120
Query: 94 ES-------------SPHIRRS----LRTIHAMGKKTGVAINPETPVAILEDVI------ 130
E+ S R S +R IH + G+AI P+T V +L D++
Sbjct: 121 EAAITSTAAKGPADESTTGRTSPTELIRYIHEQEMQAGIAIKPDTSVDVLWDILEQKDPM 180
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
D DM+L+MTV PGFGGQ+ + S +PK+ + +++EVDGG+ + +AG
Sbjct: 181 DRPDMVLVMTVYPGFGGQKFMASELPKVNALRTRY--PDLNIEVDGGLGEGTVDLAAEAG 238
Query: 191 ADLLVVGSSFFNQKGEISYAKRLND 215
A+++V GS+ F+ + L D
Sbjct: 239 ANVIVAGSAVFSAQDPAKVIAMLRD 263
>gi|326515430|dbj|BAK03628.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 20/231 (8%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + + GA +H DVMDG FVPN++ GA VI SLR ++ +
Sbjct: 10 KIAPSMLSSDFANLASEAERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLRKHTKAYL 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ AG TFH E + + + +++I A G + GV++ P TPV
Sbjct: 70 DCHLMVTNPSDYVEAFGKAGASGFTFHIEVTRDNWKELIQSIKAKGMRPGVSLKPGTPV- 128
Query: 125 ILEDVI------DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-------SIS 171
EDV ++++L+MTV PGFGGQ+ + + K+ +K G R S+
Sbjct: 129 --EDVFPLVEAETPVELVLVMTVEPGFGGQKFMPEMMDKVIPSKFFWGVRTLRKKYPSLD 186
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+EVDGG+ I AGA+ +V GSS F G + ++ L+KS A
Sbjct: 187 IEVDGGLGPSTIDVAASAGANCIVAGSSVF---GAADPGQVISALRKSVEA 234
>gi|330938435|gb|EGH42054.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 169
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 99/149 (66%), Gaps = 3/149 (2%)
Query: 57 LRSYSDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
LR Y + D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+
Sbjct: 1 LRKYGVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGL 60
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLE 173
NP TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE
Sbjct: 61 VFNPATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASARDIRLE 120
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+DGGV NI+ + AGAD V GS+ FN
Sbjct: 121 IDGGVNVNNIREIAAAGADTFVAGSAIFN 149
>gi|118784828|ref|XP_313959.3| AGAP005080-PA [Anopheles gambiae str. PEST]
gi|116128231|gb|EAA09374.3| AGAP005080-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 127/224 (56%), Gaps = 5/224 (2%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M P S +I PSIL AD S+L EE + GA +H DVMDG FVPN++FG V++ LR+
Sbjct: 1 MAPLSARIGPSILNADLSQLHEESEKLLANGADYLHLDVMDGTFVPNLTFGHPVVKCLRN 60
Query: 60 Y-SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAI 117
D+ F+ H+M+ + I +ADAG TFH E + R + G K G+A+
Sbjct: 61 KIKDAFFETHMMVQNPQQWIEPMADAGVQQYTFHIEPVLDSVADVCRKVRESGMKVGLAL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P T V ++ ID DM+L+MTV PGFGGQ+ + +PK++ + ++ +EVDGG
Sbjct: 121 KPGTAVEAVQQYIDSADMVLVMTVEPGFGGQKFMGDMMPKVQWLREHY--PALDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
V I+ +AGA+++V G++ + + + L +SA+
Sbjct: 179 VGPATIEQCSKAGANMIVAGTAIIRADDQAAVIRDLRSAVQSAI 222
>gi|71021427|ref|XP_760944.1| hypothetical protein UM04797.1 [Ustilago maydis 521]
gi|46101019|gb|EAK86252.1| hypothetical protein UM04797.1 [Ustilago maydis 521]
Length = 311
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 120/203 (59%), Gaps = 4/203 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PS+LA+D L E + +GA +H D+MDG FVPNI GA VI S+
Sbjct: 2 PATKIAPSVLASDLGNLNCECQRMMDSGADWLHMDIMDGHFVPNIVMGAPVIASVSKAVP 61
Query: 63 SVF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++F DCH+M+S + I++AG TFH E++ +R I A + VAINP T
Sbjct: 62 NIFMDCHMMVSDPGKWVKDISEAGGASYTFHLEATDDPMDVVRQIKATKMRAAVAINPGT 121
Query: 122 PVAILEDVI-DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
P + + D + + +DMIL+MTV PG GGQ+ ++ +PK+ + +A + +EVDGGV
Sbjct: 122 PASEISDELGNAVDMILVMTVWPGAGGQKFMKECMPKVAELRARF--PDLDVEVDGGVGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
+ I AGA+++V G++ FN
Sbjct: 180 KTIDRCADAGANIIVAGTAIFNH 202
>gi|307111522|gb|EFN59756.1| hypothetical protein CHLNCDRAFT_48415 [Chlorella variabilis]
Length = 246
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 8/206 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PS+L+ DF RL EE + + GA +H DVMDG FVPN++ G +++SLR ++
Sbjct: 7 PPTIIAPSLLSCDFGRLAEESKRMVELGADWLHVDVMDGHFVPNLTLGPPIVQSLRRHTP 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTGVAIN 118
+ DCHLM++ + A AG + TFH E+ +R+ + +HA G G+ I
Sbjct: 67 AFLDCHLMVAQPARWVADFAAAGASMFTFHLEAVECGQAAVRQLIGAVHAAGMLCGLTIK 126
Query: 119 PETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
P TPV L ++ DM+LIM+V PGFGGQ ST+ K+R ++ + +EVDG
Sbjct: 127 PGTPVEQLLPYLEAGLPDMVLIMSVEPGFGGQAFQPSTMDKVRFLRSRF--PDLYIEVDG 184
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFN 202
G+ I+ AGA+ +V GS+ F
Sbjct: 185 GLAPSTIQQAADAGANAIVAGSAVFG 210
>gi|126334824|ref|XP_001368566.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase [Monodelphis
domestica]
Length = 228
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + + + A +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLACLGAECTWMLDSRADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I +AGA+++V GS+
Sbjct: 179 GPDTIHKCAEAGANMIVSGSA 199
>gi|238854789|ref|ZP_04645119.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 269-3]
gi|260664020|ref|ZP_05864873.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii SJ-7A-US]
gi|282933867|ref|ZP_06339215.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 208-1]
gi|313472301|ref|ZP_07812793.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 1153]
gi|238832579|gb|EEQ24886.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 269-3]
gi|239529851|gb|EEQ68852.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 1153]
gi|260561906|gb|EEX27875.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii SJ-7A-US]
gi|281301956|gb|EFA94210.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 208-1]
Length = 220
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 4/205 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD LG +I T+AG + H D+MDG FVPN+S+G +++ R +
Sbjct: 3 IAPSILNADNLNLGRDIKKATQAGITRFHIDIMDGHFVPNLSYGPQLVQDFKREFPLVEA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM ++++ I AG D++ FH E+S + L + + G KTG+ +NPET V +
Sbjct: 63 EIHLMSDNLETMIPAFTQAGADLLEFHFEASKKVEYWLDYLASNGVKTGLVLNPETDVNV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ + E+ +L+M+V+PGFGGQ+ I T KI Q K L+ +I +EVDGG+ +
Sbjct: 123 LKPYLKELKQVLLMSVHPGFGGQKYIPETADKIAQLKQLMKDANVNIPIEVDGGINDKTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
+AGA++LV GS F + G+I+
Sbjct: 183 PLAEKAGANVLVCGSYIF-KNGDIA 206
>gi|195383236|ref|XP_002050332.1| GJ20270 [Drosophila virilis]
gi|194145129|gb|EDW61525.1| GJ20270 [Drosophila virilis]
Length = 221
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+I PSIL AD + L E + GA +H DVMDG FVPN++FG +++ LR+ ++
Sbjct: 6 KIGPSILNADLANLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKCLRNNIKEAF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+ + + I +ADAG ++ TFH E + + R I G K G+AI P T V
Sbjct: 66 FETHMMVQNPEQWIAPMADAGVNLYTFHVEPVDDVSKVSRLIQEAGMKVGLAIKPGTKVQ 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E ID D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV + I
Sbjct: 126 EIEKYIDVADLVLVMTVEPGFGGQSFMADMMPKVEWLRT--NYPNLDIEVDGGVGPKTID 183
Query: 185 SLVQAGADLLVVGSS 199
+AGA+ +V G++
Sbjct: 184 CCAKAGANWIVSGTA 198
>gi|283779200|ref|YP_003369955.1| ribulose-phosphate 3-epimerase [Pirellula staleyi DSM 6068]
gi|283437653|gb|ADB16095.1| ribulose-phosphate 3-epimerase [Pirellula staleyi DSM 6068]
Length = 229
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
++PS+L DF L E+ + +AG K +H DVMDG FVPN+++G ++ LR +D D
Sbjct: 17 VLPSLLLCDFGNLEREVRRLEEAGVKALHLDVMDGVFVPNLTYGMPIVEGLRRLTDMPLD 76
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ AG D++T H E+ + L I + G+AINP TP+
Sbjct: 77 VHLMIQRPEKYLRQFHSAGADVLTVHIEAVEDAQAILGQIRDLDMGAGIAINPSTPMTRF 136
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E + D+ L+M+V GFGGQ E + ++ + + ++++ +EVDGG+ ++ I
Sbjct: 137 EAALPYADLALVMSVEAGFGGQSFHEIALERMAHVRR-VAQKNLLIEVDGGINTKTIARA 195
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AGA L VVGS+ F Q + L+ L K
Sbjct: 196 SSAGATLFVVGSAIFGQSDYGTAVSELSALAK 227
>gi|324999325|ref|ZP_08120437.1| ribulose-phosphate 3-epimerase [Pseudonocardia sp. P1]
Length = 235
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 10/208 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKA--------GAKQIHFDVMDGCFVPNISFGADVIRSLR 58
I PSIL+ADF+RL +E + + + GA +H DVMD FVPN++ G V++SLR
Sbjct: 5 IAPSILSADFARLADEAAAVGPSADGTAGDPGADWLHVDVMDAHFVPNLTLGLPVVQSLR 64
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ +D DCHLMI D A+AG +T H E++ R + A G G++I
Sbjct: 65 AATDIPLDCHLMIEDPDRWAPGYAEAGAKNVTVHVEAARDPVMLARDLRAAGALAGLSIK 124
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDG 176
P TP+ +V+ D +L+M+V PGFGGQ + + K+R A+ L+ G + +E+DG
Sbjct: 125 PGTPLDPYVEVLKHYDTLLVMSVEPGFGGQSFMSEVLEKVRAARRLVDTGHLKLIVEIDG 184
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQK 204
G+ + I+ +AG D V GS+ +N +
Sbjct: 185 GINAETIEQAAEAGVDCFVAGSAVYNAE 212
>gi|154271280|ref|XP_001536493.1| hypothetical protein HCAG_08275 [Ajellomyces capsulatus NAm1]
gi|150409163|gb|EDN04613.1| hypothetical protein HCAG_08275 [Ajellomyces capsulatus NAm1]
Length = 235
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 17/219 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG S++ K+ + IH D+MDG FVPNI+FGA V+ +R +
Sbjct: 1 MSPPTIIAPSILSADFAALGAACSDLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRRH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGK 111
FDCH+MI+ + AGCD+ FH E++ T + +
Sbjct: 61 VARPSNPGGKGTFDCHMMIAEPQKWVTQFKGAGCDLYCFHYEAAMTSTAAKDPTDTSTTR 120
Query: 112 KTGVAINPETPVAIL------EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
+T I P+TPV +L ED +D DM+L+MTV PGFGGQ+ + S +PK+ + +
Sbjct: 121 RTSPTIKPDTPVDVLWDILEQEDPLDRPDMVLVMTVYPGFGGQKFMASELPKVNALR--V 178
Query: 166 GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+++EVDGG+ ++ +AGA+++V GS+ F +
Sbjct: 179 KYPHLNIEVDGGLGEDTVEQAAEAGANVIVAGSAVFGAR 217
>gi|255023607|ref|ZP_05295593.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-208]
Length = 156
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 101/153 (66%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEHAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR 159
+ V+ ++D++L MTVNPGFGGQ I+STI +R
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMR 156
>gi|154495881|ref|ZP_02034577.1| hypothetical protein BACCAP_00161 [Bacteroides capillosus ATCC
29799]
gi|150275079|gb|EDN02127.1| hypothetical protein BACCAP_00161 [Bacteroides capillosus ATCC
29799]
Length = 218
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 121/204 (59%), Gaps = 7/204 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+ADF+ L +I + A +H DVMDG FVPNIS G V++SLR+ +D
Sbjct: 2 IKIAPSLLSADFANLQRDIERVPNA--DWLHVDVMDGMFVPNISIGVPVVKSLRACTDKF 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + +I+ A AG D+++ H E+ P I R+L + G K G+ + P T
Sbjct: 60 LDVHLMIEKPERYIDAFAKAGADLLSVHLEADLPPAIHRALDRMEENGVKKGIVLRPITG 119
Query: 123 V-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
A++ + +D+IL+MTV PGFGGQ + +PKI + I + LEVDGG+
Sbjct: 120 AEAVIPYLKRGLDLILVMTVEPGFGGQAFMSDMLPKIEAIRGYINQYCPDCDLEVDGGID 179
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
+++AGA++LV GS+ F +
Sbjct: 180 PATAPLVMKAGANVLVAGSAVFGK 203
>gi|257055600|ref|YP_003133432.1| ribulose-phosphate 3-epimerase [Saccharomonospora viridis DSM
43017]
gi|256585472|gb|ACU96605.1| ribulose-5-phosphate 3-epimerase [Saccharomonospora viridis DSM
43017]
Length = 228
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 112/201 (55%), Gaps = 5/201 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAG---AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSIL+ADF+ LG EI + +G A +H DVMDG FVPN++ G V+ SL +D
Sbjct: 7 IAPSILSADFADLGTEIDAVAGSGDARADWVHVDVMDGHFVPNLTIGLPVVESLLRRTDL 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H E++ + + A G K G+AI P TP+
Sbjct: 67 PLDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAARDPVMLAKNLRAAGAKAGLAIKPNTPL 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
D + D +LIM+V PGFGGQ I + K+R A+ L+ G + +E+DGG+
Sbjct: 127 EDYLDTLKHYDTLLIMSVEPGFGGQAFIPEVLDKVRTARRLVDTGHLKLLVEIDGGINPD 186
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ +AG D V GS+ +
Sbjct: 187 TIEQAAEAGVDCFVAGSAVYG 207
>gi|227206446|dbj|BAH57278.1| AT5G61410 [Arabidopsis thaliana]
Length = 190
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 116/185 (62%), Gaps = 7/185 (3%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SS 96
MDG FVPNI+ G V+ +LR +D D HLMI + + AG DI++ H E S+
Sbjct: 1 MDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQQST 60
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
H+ R++ I ++G K GV +NP TP++ +E V+D +D++LIM+VNPGFGGQ IES +
Sbjct: 61 IHLHRTVNQIKSLGAKAGVVLNPGTPLSAIEYVLDMVDLVLIMSVNPGFGGQSFIESQVK 120
Query: 157 KIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
KI + + ++ ++ +EVDGGVT N +++AGA+ LV GS+ F K YA+ +
Sbjct: 121 KISDLRKMCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAK---DYAEAIK 177
Query: 215 DLKKS 219
+K S
Sbjct: 178 GIKAS 182
>gi|294790915|ref|ZP_06756073.1| ribulose-phosphate 3-epimerase [Scardovia inopinata F0304]
gi|294458812|gb|EFG27165.1| ribulose-phosphate 3-epimerase [Scardovia inopinata F0304]
Length = 221
Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 120/220 (54%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SIQI PSIL+ADF L E+ I A +H DVMD FVPN++ G V++ + S
Sbjct: 2 SIQIAPSILSADFVNLESELKTIRTA--DLVHVDVMDHHFVPNLTLGEPVVQRICQVSPI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G D +TFH ++ R R +H MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEFARCGADSVTFHMGATHAPIRLARQLHDMGVKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L D++DE DMILIMTV PGFGGQ+ + + + K+R+ + I + + ++VDGGV+
Sbjct: 120 EPLFDILDEFDMILIMTVEPGFGGQKFLSNQMDKVRRLRDQITAKGLDTHIQVDGGVSPA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGAD+LV GS+ + + + +SA
Sbjct: 180 TAAQVAKAGADVLVAGSAVYGADNPAEAIAAIREQAQSAF 219
>gi|145347973|ref|XP_001418433.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578662|gb|ABO96726.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVF 65
I PS+L+ DF+R+ +E + GA +H DVMDG FVPN++FGA V+ SLR + D+ F
Sbjct: 11 ISPSLLSCDFARMADESRKVIACGADWLHLDVMDGHFVPNLTFGAPVLTSLRPHVPDAYF 70
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS---PHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+++ +I +A A ++ TFH E+ + R+ + G + G+AI P T
Sbjct: 71 DVHLMVTNPLDYIEPMAKAKTNMFTFHAEACDGDAGVERACEEVRKAGMEVGIAIKPGTA 130
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V ++ +++ DM+L+MTV PGFGGQ+ K+++ + K + ++VDGG+++
Sbjct: 131 VDVVHSSVEKGLCDMVLVMTVEPGFGGQKFNPECCEKVKRLRERFPK--LKIQVDGGLSA 188
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I + +AGA+++V GSS F G + K ++ L++
Sbjct: 189 STIDAAAEAGANVIVAGSSVF---GSDDWTKAIDVLRE 223
>gi|321460251|gb|EFX71295.1| hypothetical protein DAPPUDRAFT_308929 [Daphnia pulex]
Length = 231
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 3/198 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYS 61
P +I PSIL AD S L +E + +GA +H DVMDG FVPN++FG +++ LR
Sbjct: 7 PCCKIGPSILCADLSCLADECRRMIHSGADYLHLDVMDGHFVPNLTFGHPIVKCLRPKMP 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D FD H+M+ + + + +ADAG + TFH E+ I R I G + GV + P T
Sbjct: 67 DVYFDMHMMVQNPEKWVESMADAGANQYTFHVEACEDIPALCRKIQESGMRVGVGLKPGT 126
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV + D D++LIMTV PGFGGQ+ +E + K++ + + +EVDGGV
Sbjct: 127 PVETILPYSDLFDVVLIMTVEPGFGGQRFMEDMMSKVQYLRTNF--PDLDIEVDGGVGPS 184
Query: 182 NIKSLVQAGADLLVVGSS 199
I + +AGA+++V G++
Sbjct: 185 TIDVVAEAGANMIVSGTA 202
>gi|125623796|ref|YP_001032279.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
MG1363]
gi|124492604|emb|CAL97549.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
MG1363]
gi|300070566|gb|ADJ59966.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 216
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 1/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A+F+ L ++ ++ AG H D+MDG FVPN G +RS +D D
Sbjct: 6 LCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSVTDKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ + +D G DII HPE+ H R+L I A GKK G+AINP T + +
Sbjct: 66 VHLMVQNPSNYVEMFSDLGADIIYIHPEADIHPARTLDKIRAKGKKAGIAINPGTSIEAV 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+++ +D +IMTVNPGF GQ+ +E KI +A +L + + VDG ++ + I+ L
Sbjct: 126 IELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKAVSLSKQFDFKVMVDGAISPQKIEEL 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ G + ++G+S K + +Y +N+L+
Sbjct: 186 SKLGVEGFILGTSALFGKHK-NYETIINELR 215
>gi|218282577|ref|ZP_03488821.1| hypothetical protein EUBIFOR_01403 [Eubacterium biforme DSM 3989]
gi|218216492|gb|EEC90030.1| hypothetical protein EUBIFOR_01403 [Eubacterium biforme DSM 3989]
Length = 219
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 6/204 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I I PSIL+ D+S + ++ + + AK +HFDVMDG FVPN++FG D+++ +
Sbjct: 3 EIVIAPSILSLDYSNVSAQLEELKASKAKWLHFDVMDGHFVPNLTFGPDILKGFKKACPL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPH----IRRSLRTIHAMGKKTGVAINP 119
D HLM+ ++ I G D++TFH E+ + I+ L IH +G K G+ + P
Sbjct: 63 FMDVHLMVEDPKTYAPIFIQNGADLVTFHTEALDNDLSRIQGLLDEIHNLGAKGGIVVKP 122
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
T + E V+ D++L+M+V PGFGGQ+ + + K+ K + ++S +E+DGG
Sbjct: 123 NTAIEPFESVLKSCDLVLVMSVEPGFGGQKFMADMLKKVEWLKEKRQELNLSYRIEIDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFF 201
+ KS + AG D LV GS F
Sbjct: 183 INQDTYKSALDAGCDTLVAGSYVF 206
>gi|42519407|ref|NP_965337.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii NCC 533]
gi|41583695|gb|AAS09303.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii NCC 533]
Length = 216
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 121/198 (61%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I ++G + H D+MDG FVPN+S+G ++++ RS+ +
Sbjct: 2 IAPSILNADNMHLSRDIKAAIESGIDRFHIDIMDGHFVPNLSYGPELVKDFKRSFPLTDA 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM + +++ + + +AGCD++ FH E++ + L+ + + G+AINP TPV
Sbjct: 62 EIHLMSNDLETTLPLFVEAGCDLLEFHYEATDNPEYWLKYLKDHNVRCGMAINPSTPVQK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ + E+D +L+MTV PGFGGQ+ E ++ ++ + K +I ++S +EVDGG+ + +
Sbjct: 122 LQPFLKELDQVLLMTVKPGFGGQKFEEESVERLVELKNMIEAENLSVPIEVDGGIEPKTL 181
Query: 184 KSLVQAGADLLVVGSSFF 201
K AGA + V GS F
Sbjct: 182 KLTRDAGATIFVAGSYIF 199
>gi|315302009|ref|ZP_07872992.1| ribulose-phosphate 3-epimerase, ic [Listeria ivanovii FSL F6-596]
gi|313629618|gb|EFR97768.1| ribulose-phosphate 3-epimerase, ic [Listeria ivanovii FSL F6-596]
Length = 223
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS++ ADF+ L +E+ + +AG+ H D+MDG FVPN G ++R + +
Sbjct: 4 ILICPSMMCADFANLKQEVEVLDQAGSDIFHIDIMDGKFVPNFGMGLQDFEAIRKLTKKL 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ AD G DII HP H R+L I GKK G+AINP T +A
Sbjct: 64 VDVHLMIMNPGDYVETFADMGADIIYIHPXXDIHPARTLDKIKQKGKKAGIAINPGTSIA 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+++++ +D +++MTVNPGF GQ ++ KI + S + VDG + + I
Sbjct: 124 TVKELLPLVDYVMVMTVNPGFAGQAYLDYVDQKISELLTAKSNYSFEIMVDGAIAPKKIA 183
Query: 185 SLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSAL 221
L + G V+G S+ F + G SY + + LK L
Sbjct: 184 KLSKMGVKGFVLGTSTLFGKAG--SYQEIIQKLKSEKL 219
>gi|256851314|ref|ZP_05556703.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 27-2-CHN]
gi|260660738|ref|ZP_05861653.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 115-3-CHN]
gi|282933241|ref|ZP_06338628.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 208-1]
gi|297206184|ref|ZP_06923579.1| possible ribulose-phosphate 3-epimerase [Lactobacillus jensenii
JV-V16]
gi|256616376|gb|EEU21564.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 27-2-CHN]
gi|260548460|gb|EEX24435.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 115-3-CHN]
gi|281302745|gb|EFA94960.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 208-1]
gi|297149310|gb|EFH29608.1| possible ribulose-phosphate 3-epimerase [Lactobacillus jensenii
JV-V16]
Length = 220
Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 4/205 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD LG +I T+AG + H D+MDG FVPN+S+G +++ R +
Sbjct: 3 ISPSILNADNLNLGRDIKKATQAGITRFHIDIMDGHFVPNLSYGPQLVQDFKREFPLVEA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++++ I AG D++ FH E++ + L + + G K G+ +NPET VA
Sbjct: 63 EVHLMSNNLETTIPAFTQAGADLLEFHFEATNKVDYWLDYLASNGVKAGLVLNPETDVAS 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ + ++ +L+M+V+PGFGGQ+ I T KI Q K L + +I +EVDGG+ +
Sbjct: 123 LKPYLKKLKQVLLMSVHPGFGGQKYIPETAEKIAQLKQLTNEAGVNIPIEVDGGINDKTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
QAGAD+LV GS F + G+I+
Sbjct: 183 PLAAQAGADILVCGSYIF-KNGDIA 206
>gi|225452134|ref|XP_002263010.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 222
Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 123/206 (59%), Gaps = 9/206 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR +
Sbjct: 1 MAPA-KIAPSMLSSDFANLASEAQRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINP 119
+++ DCHLM+++ ++ + AG TFH E S + L I + G + GVA+ P
Sbjct: 60 TNAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEVSKENWQELVERIRSKGMRPGVALKP 119
Query: 120 ETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVD 175
TP+ + +++ ++M+L+MTV PGFGGQ+ + + K+R AL K S+ +EVD
Sbjct: 120 GTPIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPEMMDKVR---ALRKKYPSLDIEVD 176
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFF 201
GG+ I AGA+ +V GSS F
Sbjct: 177 GGLGPSTIDMAASAGANCIVAGSSVF 202
>gi|50954786|ref|YP_062074.1| ribulose-phosphate 3-epimerase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951268|gb|AAT88969.1| ribulose-phosphate 3-epimerase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 220
Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 123/218 (56%), Gaps = 8/218 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSILAADF L ++ I A A +H DVMD FVPN++FG ++ ++ S
Sbjct: 2 AARINPSILAADFVNLERDLGRI--ASADLVHVDVMDSHFVPNLTFGPQMVGRIQDVSAI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A+ G +TFH E++ R + A+G + G+A+ P T V
Sbjct: 60 PLDVHLMIDDPDRWAPGYAELGAHSVTFHAEAAADPVALARRLRALGARAGIALKPGTAV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
D++ E D +L+MTV PGFGGQ + T+PK+R+ + + R + LEVDGG+T
Sbjct: 120 DGYLDLLPEFDQVLVMTVEPGFGGQSFMLETMPKLRRLRETVEARGLDVWLEVDGGITEE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I +AGAD V GS+ F +GE A+R+ L+ +
Sbjct: 180 TIAVAAEAGADTFVAGSAVF--RGE--PAERIEALRAA 213
>gi|300784677|ref|YP_003764968.1| ribulose-phosphate 3-epimerase [Amycolatopsis mediterranei U32]
gi|299794191|gb|ADJ44566.1| ribulose-phosphate 3-epimerase [Amycolatopsis mediterranei U32]
Length = 223
Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 113/201 (56%), Gaps = 5/201 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAG---AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSILAADF+RLGEEI+ + G A +H DVMD FVPN++ G V ++L +D
Sbjct: 2 IAPSILAADFARLGEEIAAVAAGGETRADWVHVDVMDAHFVPNLTLGLPVAKALIDSTDL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H E++ + + A G K G+++ P T +
Sbjct: 62 PIDCHLMIDDPDRWAIGYAEAGAYNVTVHAEAAKDPVALAKNLRAAGAKAGLSLKPGTAL 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
D + D +L+M+V PGFGGQ I + K+R A+ L+ G + +E+DGG+ +
Sbjct: 122 EPWLDALKHYDTLLVMSVEPGFGGQSFIADVLEKVRTARRLVDTGHLKLIVEIDGGINAD 181
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I+ +AG D V GS+ +
Sbjct: 182 TIEQAAEAGVDCFVAGSAVYG 202
>gi|195028967|ref|XP_001987346.1| GH20024 [Drosophila grimshawi]
gi|193903346|gb|EDW02213.1| GH20024 [Drosophila grimshawi]
Length = 221
Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL AD + L EE + GA +H DVMDG FVPN++FG +++ LR+
Sbjct: 1 MSIQAKIGPSILNADLANLAEESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKCLRNK 60
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ F+ H+M+ + + I ++DAG ++ TFH E + + R I G K G+AI P
Sbjct: 61 IKEAFFETHMMVQNPEQWIAPMSDAGVNLYTFHIEPVEDVCKVTRLIQEAGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V +E ++ D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTSVKDIEKYVELADLVLVMTVEPGFGGQSFMADMMPKVEWLRN--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSS 199
+ I +AGA+ +V G++
Sbjct: 179 PKTIDCCAKAGANWIVSGTA 198
>gi|302848131|ref|XP_002955598.1| hypothetical protein VOLCADRAFT_109319 [Volvox carteri f.
nagariensis]
gi|300259007|gb|EFJ43238.1| hypothetical protein VOLCADRAFT_109319 [Volvox carteri f.
nagariensis]
Length = 258
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 27/222 (12%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PSIL++DF+RL +E + GA +H DVMDG FVPN++ GA ++ SLR ++D
Sbjct: 16 PPAIIAPSILSSDFARLADECKRMVDLGADWLHVDVMDGHFVPNLTLGAPIVASLRKHTD 75
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESS-----------------PHIRRSLRT 105
+ DCHLM ++ + + A AG D+ITFH E++ P +
Sbjct: 76 AFLDCHLMTTNPELWVKDFAKAGADMITFHLEAAAGPGPDDWHSLAPDQPHPAVVDMCHG 135
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
+ A G G+A+ P TPV + +++ +DM+L+MTV PGFGGQ + + AKA
Sbjct: 136 VRAAGMHVGLALKPATPVELAVPYVEQGLVDMVLVMTVEPGFGGQSFMAD-----KAAKA 190
Query: 164 LIGKRSIS---LEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+ ++ ++VDGG+ + AGA+++V GS+ F
Sbjct: 191 AVLRKKFPDLLIQVDGGLAPATVDRAAAAGANVIVAGSAVFG 232
>gi|225021365|ref|ZP_03710557.1| hypothetical protein CORMATOL_01384 [Corynebacterium matruchotii
ATCC 33806]
gi|224945747|gb|EEG26956.1| hypothetical protein CORMATOL_01384 [Corynebacterium matruchotii
ATCC 33806]
Length = 218
Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 4/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ LG +I + A A IH D+MDG FVPN+SFGAD+ + R + D
Sbjct: 6 ISPSILSADFTNLGADIQAV--ANADWIHVDIMDGHFVPNLSFGADITAAARRATTQPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ AG D I FH E++ R I A G + G ++ P TP+
Sbjct: 64 VHLMIDNPERWVDNYIKAGADHIIFHVEATDDPVSLARHIRAAGVQAGFSLRPGTPIEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+DE D++LIM+V PGFGGQ+ + + K+R + I R ++ +E+DGG+++ I
Sbjct: 124 LPTLDEFDLVLIMSVEPGFGGQKFMPDQLDKVRALRHEITTRGLATLIEIDGGISADTIA 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++G D V GS+ F + L L
Sbjct: 184 QAAESGCDAFVAGSAIFTNGDPAAAVTNLRTL 215
>gi|48477917|ref|YP_023623.1| ribulose-phosphate 3-epimerase [Picrophilus torridus DSM 9790]
gi|48430565|gb|AAT43430.1| ribulose-phosphate 3-epimerase [Picrophilus torridus DSM 9790]
Length = 214
Score = 147 bits (372), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSI+++D S L +EI AGA H DVMDG FV NI+ G D+I+++R +
Sbjct: 2 VEVSPSIISSDLSHLYDEIKRCEDAGAGSFHLDVMDGHFVNNITMGPDLIKAIRKSTGLR 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D + DAG D++ H ES + L+ H + G+ INPET
Sbjct: 62 LDAHLMIERPDKYYKSFLDAGADVLLIHYESPVNTMELLKKFHRENIRYGIVINPETNFE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +I+ +++LIM+VNPGF GQ+ I+ ++ K+ QAK I ++ +E+DGG+
Sbjct: 122 RVKPLIENAEILLIMSVNPGFSGQKFIDDSLIKVSQAKEFIRANNLKTRIEIDGGINDET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ AGAD+L V +SF + G I+ K L +
Sbjct: 182 GRLAANAGADIL-VSASFIFKNGVINPIKTLKNF 214
>gi|309804783|ref|ZP_07698847.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LactinV 09V1-c]
gi|312873261|ref|ZP_07733317.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF 2052A-d]
gi|308165893|gb|EFO68112.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LactinV 09V1-c]
gi|311091272|gb|EFQ49660.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF 2052A-d]
Length = 216
Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 2 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCISRDFPDMEI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++ + + A+ C I+ FH E++ I + + + G K +AINP+TPV
Sbjct: 62 EIHLMSNNLPVMLPLFANLSCAILEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVEK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L +D+ID +L+M+V PGFGGQ+ I KI K ++ + I LE+DGG+
Sbjct: 122 LVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANQGYVIPLEIDGGINDVTA 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD++V GS F
Sbjct: 182 NKVKTAGADIVVAGSYIFKH 201
>gi|257068773|ref|YP_003155028.1| ribulose-5-phosphate 3-epimerase [Brachybacterium faecium DSM 4810]
gi|256559591|gb|ACU85438.1| ribulose-5-phosphate 3-epimerase [Brachybacterium faecium DSM 4810]
Length = 228
Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL ADF +G E+ I A A +H DVMD FVPN++FGA ++ + S D
Sbjct: 12 IHPSILNADFMSIGTELDRI--ATADSVHVDVMDNHFVPNLTFGASMVEQIVERSAIPVD 69
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AG +TFH E++ + R + + GVA+ P T V L
Sbjct: 70 AHLMIEDADDEAPAYAEAGAASVTFHLEAARAPVKLARDLRRKNTQAGVALRPATAVEPL 129
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
D+I E DM+L+MTV PGFGGQ +++ +PKIR+A+A I + + +S++VDGGV+ I+
Sbjct: 130 LDIIGEFDMLLLMTVEPGFGGQSFLDTMLPKIRRARAAISEANLEVSIQVDGGVSRETIE 189
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+AGA++ V GS+ + + L +L +
Sbjct: 190 RCAEAGANIFVAGSAIYRAQDAAEEISALRELAQ 223
>gi|18395962|ref|NP_566153.1| ribulose-phosphate 3-epimerase, cytosolic, putative /
pentose-5-phosphate 3-epimerase, putative [Arabidopsis
thaliana]
gi|30678440|ref|NP_850495.1| ribulose-phosphate 3-epimerase, cytosolic, putative /
pentose-5-phosphate 3-epimerase, putative [Arabidopsis
thaliana]
gi|13877557|gb|AAK43856.1|AF370479_1 putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
gi|21592447|gb|AAM64398.1| putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
gi|25084145|gb|AAN72185.1| putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
gi|332640203|gb|AEE73724.1| ribulose-phosphate 3-epimerase [Arabidopsis thaliana]
gi|332640204|gb|AEE73725.1| ribulose-phosphate 3-epimerase [Arabidopsis thaliana]
Length = 225
Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 126/203 (62%), Gaps = 8/203 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + + GA +H D+MDG FVPN++ GA VI SLR ++++
Sbjct: 3 SPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNA 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ ++ +A AG TFH E + + ++ + I + G + GVA+ P TP
Sbjct: 63 YLDCHLMVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTP 122
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGV 178
V + +++ ++M+L+MTV PGFGGQ+ + + K+R AL K ++ ++VDGG+
Sbjct: 123 VEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVR---ALRQKYPTLDIQVDGGL 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFF 201
I + AGA+ +V GSS F
Sbjct: 180 GPSTIDTAAAAGANCIVAGSSVF 202
>gi|298346828|ref|YP_003719515.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii ATCC 43063]
gi|304389467|ref|ZP_07371430.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315655373|ref|ZP_07908273.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii ATCC 51333]
gi|315656713|ref|ZP_07909600.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298236889|gb|ADI68021.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii ATCC 43063]
gi|304327277|gb|EFL94512.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315490313|gb|EFU79938.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii ATCC 51333]
gi|315492668|gb|EFU82272.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 220
Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 121/209 (57%), Gaps = 4/209 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PS+L D + + +I A +H D+MD FVPN+++G ++ + +
Sbjct: 2 SLKIYPSVLNCDQMHFAKALQDIKSADG--VHLDIMDNHFVPNLTWGLPTATAVLNSTRL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D A AGC I+ FH E+S R+ +H++G K G+A+NP TP
Sbjct: 60 PVDAHLMIENPDRWSLEYAKAGCAIVCFHLEASRAPIRTADVLHSLGAKVGIALNPATPA 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
+ ++D++ D + +M+V PGFGGQ+ I +PKIRQ +A + + +EVDGG+
Sbjct: 120 SAIKDILGRFDQVTVMSVEPGFGGQKFIPEVLPKIRQLRAYAEDARLPLDIEVDGGINDD 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ ++QAGA+++V GS F + E + A
Sbjct: 180 TLPLVLQAGANVVVAGSYVFKRNPEQAIA 208
>gi|261403670|ref|YP_003247894.1| ribulose-phosphate 3-epimerase [Methanocaldococcus vulcanius M7]
gi|261370663|gb|ACX73412.1| ribulose-phosphate 3-epimerase [Methanocaldococcus vulcanius M7]
Length = 237
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I SIL+ADF L EEI +AG H D+MDG FVPNIS G + + ++ +D
Sbjct: 2 IKIGASILSADFGHLKEEIKRAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++D IN + D ITFH E+ R + I +G K VA+NP TP+
Sbjct: 62 VDVHLMVENVDLFINEFEE--MDYITFHIEAVRFPFRIINKIKNIGAKPIVALNPATPLD 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+E ++DE+ +L+MTV PGF GQ+ I KIR+ K++I + + VDGG+
Sbjct: 120 EIEYILDEVYAVLVMTVEPGFSGQKFIPVMTKKIRKLKSMIVENGYDTKIFVDGGINVET 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V+AGAD+L+ S+ F ++ + K L D AL I
Sbjct: 180 APMAVKAGADVLIAASAIFGKEDVKTAVKNLRDSALKALNI 220
>gi|239793659|dbj|BAH72934.1| ACYPI003993 [Acyrthosiphon pisum]
Length = 204
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-Y 60
T S +I PS+L AD S+L E + +GA +H DVMDG FVPN++FG V++ LR+
Sbjct: 4 TLSCKIGPSVLNADLSQLYNESQKLIDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRTKL 63
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++VF+ H+M+ + I+ +ADA D TFH E + R I G K G+AI P
Sbjct: 64 PNAVFETHMMVQNPLQWISAMADANVDQYTFHIEPCDDVPLVCRKIKEAGMKVGLAIKPG 123
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +E+ ID DMIL+MTV PGFGGQ+ + +PKI + ++ +EVDGG+
Sbjct: 124 TPVTCVEEYIDMADMILVMTVEPGFGGQKFMTDMMPKIEILRE--KYPTMDIEVDGGIGP 181
Query: 181 RNI 183
NI
Sbjct: 182 NNI 184
>gi|15835016|ref|NP_296775.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum Nigg]
gi|270285182|ref|ZP_06194576.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum Nigg]
gi|270289201|ref|ZP_06195503.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum Weiss]
gi|301336578|ref|ZP_07224780.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum MopnTet14]
gi|14195180|sp|Q9PKR7|RPE_CHLMU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|7190438|gb|AAF39254.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum Nigg]
Length = 228
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 118/203 (58%), Gaps = 4/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSI+ AD + LG+ NI ++GA IH DVMDG FVPNI+FG +I ++ +D
Sbjct: 6 VLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRSTDLF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ H MI + + AG D I H E++ +++ L I G + G+A +PET +
Sbjct: 66 LEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENLKEILDYIRKCGVQAGIAFSPETSIE 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKR-SISLEVDGGVTS 180
+ I D+IL+M+V PGF GQ+ I TI KI RQA +GK S +EVDGG+
Sbjct: 126 FISAFIPLCDVILLMSVQPGFCGQKFIPDTIEKIRFVRQAIQTLGKEGSCLIEVDGGIDE 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
+ ++ +AGAD+LV S FF +
Sbjct: 186 ESARACREAGADILVAASYFFKK 208
>gi|268319216|ref|YP_003292872.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii FI9785]
gi|262397591|emb|CAX66605.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii FI9785]
Length = 216
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I + G + H D+MDG FVPN+S+G ++++ RS+ +
Sbjct: 2 IAPSILNADNMHLSRDIKTAIEGGIDRFHIDIMDGHFVPNLSYGPELVKDFKRSFPLTDA 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM + +++ + + +AGCD++ FH E++ + ++ + + G+AINP TPV
Sbjct: 62 EIHLMSNDLETTLPLFVEAGCDLLEFHYEATDNPEYWIKYLKDHNVRCGMAINPSTPVQK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ + E+D +L+MTV PGFGGQ+ E ++ ++ + K +I ++S +EVDGG+ + +
Sbjct: 122 LQPFLKELDQVLLMTVKPGFGGQKFEEESVERLVELKNMIEAENLSVPIEVDGGIEPKTL 181
Query: 184 KSLVQAGADLLVVGSSFF 201
K AGA + V GS F
Sbjct: 182 KLTRDAGATIFVAGSYIF 199
>gi|227890272|ref|ZP_04008077.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii ATCC 33200]
gi|227849086|gb|EEJ59172.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii ATCC 33200]
Length = 216
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 121/198 (61%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I ++G + H D+MDG FVPN+S+G ++++ RS+ +
Sbjct: 2 IAPSILNADNMHLSRDIKAAIESGIDRFHIDIMDGHFVPNLSYGPELVKDFKRSFPLTDA 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM + +++ + + +AGCD++ FH E++ + ++ + + G+AINP TPV
Sbjct: 62 EIHLMSNDLETTLPLFVEAGCDLLEFHYEATDNPEYWIKYLKDHNVRCGMAINPSTPVQK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ + E+D +L+MTV PGFGGQ+ E ++ ++ + K +I ++S +EVDGG+ + +
Sbjct: 122 LQPFLKELDQVLLMTVKPGFGGQKFEEQSVERLVELKNMIEAENLSVPIEVDGGIEPKTV 181
Query: 184 KSLVQAGADLLVVGSSFF 201
K AGA + V GS F
Sbjct: 182 KLTRDAGATIFVAGSYIF 199
>gi|328475807|gb|EGF46543.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 220]
Length = 170
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 105/160 (65%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
LE V+D+ID IL+MTVNPG GGQ+ +S++ K + K ++
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKSEKPKHIL 162
>gi|296140263|ref|YP_003647506.1| ribulose-phosphate 3-epimerase [Tsukamurella paurometabola DSM
20162]
gi|296028397|gb|ADG79167.1| ribulose-phosphate 3-epimerase [Tsukamurella paurometabola DSM
20162]
Length = 228
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 114/213 (53%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNIT-KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
S I PSIL+ADF+RLG EI + GA +H DVMD FVPN++ G V++SL + +
Sbjct: 6 SPMIAPSILSADFARLGAEIDAVGGPEGADWVHVDVMDNHFVPNLTLGLPVVQSLLTATT 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLMI A+AG +TFH E++ + I A G K G+AI P T
Sbjct: 66 IPLDCHLMIDEPGRWAPPYAEAGAHNVTFHAEATDDPVAVAKDIRAAGGKAGLAIKPGTA 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+V+ D +L+M+V PGFGGQ I + K R A+ L+ + L E+DGG+ +
Sbjct: 126 FEPYIEVLKSFDTLLVMSVEPGFGGQSFIADVLDKARAARKLVDSDELKLLVEIDGGINA 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I+ AG D V GS+ +N ++L
Sbjct: 186 DTIEQAAAAGVDCFVAGSAVYNAADPAEAVRKL 218
>gi|134098690|ref|YP_001104351.1| ribulose-phosphate 3-epimerase [Saccharopolyspora erythraea NRRL
2338]
gi|133911313|emb|CAM01426.1| putatibe ribulose-phosphate 3-epimerase [Saccharopolyspora
erythraea NRRL 2338]
Length = 233
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 120/206 (58%), Gaps = 5/206 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNIT-KAG--AKQIHFDVMDGCFVPNISFGADVIRSL 57
M+ I PSIL+ADF+RL +E++ + + G A +H DVMD FVPN++ G V++SL
Sbjct: 1 MSNQPMIAPSILSADFARLADEMAAVNGEPGHRADWLHVDVMDAHFVPNLTLGLPVVKSL 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+D DCHLMI D A+AG +T H E++ + + A G K G++I
Sbjct: 61 LKATDIPIDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAAEDPVMLAKNLRAAGAKAGLSI 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVD 175
P TP+ +V+ D +L+M+V PGFGGQ I + K+R+A+ L+ G ++ +E+D
Sbjct: 121 KPNTPLEPYVEVLKHYDTLLVMSVEPGFGGQSFIADVLTKVRKARELVDTGHLNLVVEID 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFF 201
GG+ + I+ +AG D V GS+ +
Sbjct: 181 GGINADTIEQAAEAGVDCFVAGSAVY 206
>gi|269218511|ref|ZP_06162365.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211622|gb|EEZ77962.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 220
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL DF L +E++ I+ A H D+MD FVPN++ G + + S
Sbjct: 2 SVVISPSILNCDFGHLADELAKISNA--DFAHVDIMDNHFVPNLALGLPLAEAAVKSSPI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D + A+ GC+ +TFH E++ R R I AMG++ G+A+ P T +
Sbjct: 60 PVDAHLMIEDPDRWAPVYAELGCESVTFHAEAAQAPIRLAREIRAMGRRAGLALRPATGI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
D++ E DMIL+MTV PGFGGQ IE+ +PK+ + + I + ++VDGGV+
Sbjct: 120 EPYLDILGEFDMILVMTVEPGFGGQPFIEAMMPKVSRTRRAIEAAGLDVWIQVDGGVSRS 179
Query: 182 NIKSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
I+ +AGA+ V GS+ + + E+ + + L
Sbjct: 180 TIEKAAEAGANNFVAGSAVYKADDAAAEVDFLRSL 214
>gi|329667068|gb|AEB93016.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii DPC 6026]
Length = 216
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 121/198 (61%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I ++G + H D+MDG FVPN+S+G ++++ RS+ +
Sbjct: 2 IAPSILNADNMHLSRDIKAAIESGIDRFHIDIMDGHFVPNLSYGPELVKDFKRSFPLTDA 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM + +++ + + +AGCD++ FH E++ + ++ + + G+AINP TPV
Sbjct: 62 EIHLMSNDLETTLPLFVEAGCDLLEFHYEATDNPEYWIKYLKDHNVRCGMAINPSTPVQK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ + E+D +L+MTV PGFGGQ+ E ++ ++ + K +I ++S +EVDGG+ + +
Sbjct: 122 LQPFLKELDQVLLMTVKPGFGGQKFEEESVERLVELKNMIEAENLSVPIEVDGGIEPKTL 181
Query: 184 KSLVQAGADLLVVGSSFF 201
K AGA + V GS F
Sbjct: 182 KLTRDAGATIFVAGSYIF 199
>gi|269793256|ref|YP_003318160.1| ribulose-phosphate 3-epimerase [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100891|gb|ACZ19878.1| ribulose-phosphate 3-epimerase [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 232
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 121/204 (59%), Gaps = 12/204 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVF 65
+ PS+L+AD +G + ++ + +H DVMDG FVPN++FG +R+LR + +
Sbjct: 18 LAPSLLSADMMDVGGSVESL-RGAFDWLHVDVMDGHFVPNLTFGPGFVRALRGRFPHAFL 76
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ D ++ A AG D++ H E++ H+ R + ++ +G GV++NP TPV
Sbjct: 77 DVHLMVEEPDRMVSDFASAGADLLCVHVEAARHLHRLIGSMRDLGVMAGVSLNPATPVEW 136
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPK------IRQAKALIGKRSISLEVDGGVT 179
+ V+ +D++L+M+VNPGFGGQ+ I T+ K R+A+ L +E+DGG+
Sbjct: 137 VYPVLHMVDLVLVMSVNPGFGGQRFIPETLEKTVALARYREARGL----GFLIEMDGGLG 192
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
N + +AG D++V GS+ F Q
Sbjct: 193 EENCAEVCRAGCDVVVAGSAVFGQ 216
>gi|118380001|ref|XP_001023165.1| ribulose-phosphate 3-epimerase family protein [Tetrahymena
thermophila]
gi|89304932|gb|EAS02920.1| ribulose-phosphate 3-epimerase family protein [Tetrahymena
thermophila SB210]
Length = 242
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 115/204 (56%), Gaps = 10/204 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGC-----FVPNISFGADVIRSLRSYS 61
I PSIL+AD S L +E + GA +H DVMDG FVPN +FG V++ LR
Sbjct: 10 IAPSILSADLSSLADECQKLNDQGADWLHIDVMDGQIVLYHFVPNFTFGQTVVKCLRKKV 69
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FDCHLMIS + +AG D TFH E+ + + + I G + G+AI P+T
Sbjct: 70 KGFFDCHLMISEPQKWVKDFHNAGADQYTFHYEAVENQEQLCKEIKETGMRVGIAIKPKT 129
Query: 122 PVA-ILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ L +ID +DM+LIMTV PGFGGQ+ ++ + K+ + K + ++VDGG+
Sbjct: 130 QIEDKLLQLIDSNLVDMVLIMTVEPGFGGQKFMQDMMQKVELLRRKYPK--LDIQVDGGI 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
NI + +AGA+++V GS N
Sbjct: 188 VCENIDIVAKAGANVIVSGSGIVN 211
>gi|289741201|gb|ADD19348.1| d-ribulose-5-phosphate 3-epimerase [Glossina morsitans morsitans]
Length = 228
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 123/214 (57%), Gaps = 8/214 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSV 64
+I PSIL AD S L E + GA +H DVMDG FVPN++FG +++ LR D+
Sbjct: 6 KIGPSILNADLSDLASESQRLLDNGADYLHLDVMDGHFVPNLTFGHSLVKCLRRKIKDTP 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F+ H+M+++ I +ADAG ++ TFH P I R I G K G+A+ P T
Sbjct: 66 FETHMMVTNPQQWIQNMADAGVNLYTFHVEPVCQSDIPEICRLIQEAGMKVGLAVKPGTR 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V ++ ID D++L+MTV PGFGGQ + +PK++ + ++++EVDGGV
Sbjct: 126 VETVQQYIDLADVVLVMTVEPGFGGQAFMRDMMPKVQWLRE--HYPNLNIEVDGGVGPET 183
Query: 183 IKSLVQAGADLLVVGSSFF---NQKGEISYAKRL 213
I+ +AGA+++V G++ NQK I+ + +
Sbjct: 184 IEYCAKAGANMIVSGTALIEANNQKEVINLLRSM 217
>gi|224438092|ref|ZP_03659031.1| ribulose-phosphate 3-epimerase [Helicobacter cinaedi CCUG 18818]
gi|313144536|ref|ZP_07806729.1| ribulose-phosphate 3-epimerase [Helicobacter cinaedi CCUG 18818]
gi|313129567|gb|EFR47184.1| ribulose-phosphate 3-epimerase [Helicobacter cinaedi CCUG 18818]
Length = 224
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 121/199 (60%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PS+L+ADFS+LGEE+ I A +H DVMDG FVPN++ G +++S+ S
Sbjct: 13 ILVAPSVLSADFSKLGEEVRAICDAECDYVHIDVMDGHFVPNLTMGPMIVKSIAKASSKP 72
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ + + A ++ H E H+ R + I +G K GV +NP T
Sbjct: 73 LDIHLMVKNVPFFVELFAPLKPAFMSVHIEEVQHLHRVIWQIKDLGIKAGVVLNPHTNEQ 132
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE ++ +ID++L+M+VNPGFGGQ I S++ K++ K L + + + LE+DGGV+ +N
Sbjct: 133 DLEYILPDIDLVLLMSVNPGFGGQSFIPSSLKKLKNLKQLRDRLNPNCLLEIDGGVSDKN 192
Query: 183 IKSLVQAGADLLVVGSSFF 201
I L AG D++V GS F
Sbjct: 193 IMDLKNAGIDMVVAGSYIF 211
>gi|294786943|ref|ZP_06752197.1| ribulose-phosphate 3-epimerase [Parascardovia denticolens F0305]
gi|315226580|ref|ZP_07868368.1| ribulose-phosphate 3-epimerase [Parascardovia denticolens DSM
10105]
gi|294485776|gb|EFG33410.1| ribulose-phosphate 3-epimerase [Parascardovia denticolens F0305]
gi|315120712|gb|EFT83844.1| ribulose-phosphate 3-epimerase [Parascardovia denticolens DSM
10105]
Length = 224
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 117/203 (57%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PSIL+ADF L E+ I A +H DVMD FVPN++ G +++ + S
Sbjct: 5 TIKIAPSILSADFVNLQSELEAIKTA--DLVHVDVMDHHFVPNLTMGEPIVKRICEVSPI 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G +TFH ++ R R +H MG K A+ P PV
Sbjct: 63 PVDAHLMIEDPDRWAPEFARCGARSVTFHMGAAHAPVRLARQLHDMGAKACFAVRPAEPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ + + + K+R+ + I +R S S++VDGGV+
Sbjct: 123 ESIFDILDEFDMILIMTVEPGFGGQKFLSNQMGKVRRLRDEITRRGLSTSIQVDGGVSPT 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
+ +AGAD+LV GS+ + K
Sbjct: 183 TAPIVAEAGADVLVAGSAVYGVK 205
>gi|217967816|ref|YP_002353322.1| Ribulose-phosphate 3-epimerase [Dictyoglomus turgidum DSM 6724]
gi|217336915|gb|ACK42708.1| Ribulose-phosphate 3-epimerase [Dictyoglomus turgidum DSM 6724]
Length = 220
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 126/204 (61%), Gaps = 3/204 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I++ PS+L+AD + I I K + +H D+MDG FVPN+S+G ++++LR+
Sbjct: 2 EIKVYPSLLSADLLNMERSIE-IVKDLSDALHVDIMDGHFVPNLSYGPSLVKALRNRYSI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM+ ++ +++ +AG + FH E++ H +R L+ I + + +NP TP+
Sbjct: 61 PLNVHLMVEKPENFVDMFIEAGASHLGFHVEATHHPQRLLKYIRDHNIRPFITLNPATPL 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSR 181
+E ++ E+DM+LIMTVNPG+GGQ+ + ++ KI+ + + K I+L+ VDGG+
Sbjct: 121 NTIEYLLGELDMVLIMTVNPGYGGQEFLHFSLKKIKSLREMAVKEGINLDIMVDGGIDLH 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKG 205
+++AGA++L+ G+S FN +
Sbjct: 181 TAPLVIEAGANVLISGNSIFNSEN 204
>gi|254581202|ref|XP_002496586.1| ZYRO0D03520p [Zygosaccharomyces rouxii]
gi|238939478|emb|CAR27653.1| ZYRO0D03520p [Zygosaccharomyces rouxii]
Length = 238
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 25/225 (11%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-------- 58
I PSILA DF+ LG E + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 6 IAPSILACDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRGDD 65
Query: 59 -----SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ + FDCH+M+ + + + A G D TFH E++ ++ I + G +
Sbjct: 66 PNNTANKPAAFFDCHMMVENPERWVEDFAKCGADQFTFHYEATKDPVSLVKLIKSHGIRA 125
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
A+ P TPV +L ++ +DM L+MTV PGFGGQ+ + +PK+ ++ + ++
Sbjct: 126 ACAVKPGTPVDVLFELAPHLDMALVMTVEPGFGGQKFMADMMPKVETLRSKF--PHLDIQ 183
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN----------QKGEIS 208
VDGG+ I +AGA+++V G+S F KGE+S
Sbjct: 184 VDGGLGKATIPQAAEAGANVIVAGTSVFTATDPEEVISFMKGEVS 228
>gi|219117749|ref|XP_002179664.1| ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217408717|gb|EEC48650.1| ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 227
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 117/199 (58%), Gaps = 6/199 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
I PS+L+ D + + + + GA +H D+MDG FVPN+SFG VI SLR + D+
Sbjct: 9 IAPSLLSCDLANIATDAKQMLDMGADWLHMDIMDGHFVPNLSFGPPVIASLREAIKDAYI 68
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PH--IRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+S+ + + AGC TFH ES P + + + G K G+ I P TP
Sbjct: 69 DCHLMVSAPFKWVAPMKKAGCTSFTFHLESEMPEGGVPAMIEMVKDAGMKVGMVIKPGTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L+ I +IDM+LIMTV PGF GQ + +PKI+ ++ +++++VDGGV+
Sbjct: 129 IENLDPFIPDIDMVLIMTVEPGFSGQSFMADMMPKIKYLRS--NYPNLNIQVDGGVSPST 186
Query: 183 IKSLVQAGADLLVVGSSFF 201
I + +AGA+++V S+ F
Sbjct: 187 IDAAAEAGANVIVAASAIF 205
>gi|114583053|ref|XP_001145848.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 7 [Pan
troglodytes]
Length = 234
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 118/207 (57%), Gaps = 10/207 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDG----C--FVPNISFGADVI 54
M +I PSIL +D + LG E + +GA +H DVMDG C FVPNI+FG V+
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGFCLSCRHFVPNITFGHPVV 60
Query: 55 RSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
SLR D FD H+M+S + + +A AG + TFH E++ + ++ I G K
Sbjct: 61 ESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMK 120
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +
Sbjct: 121 VGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDI 178
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSS 199
EVDGGV + +AGA+++V GS+
Sbjct: 179 EVDGGVGPDTVHKCAEAGANMIVSGSA 205
>gi|217077907|ref|YP_002335625.1| rpe ribulose-phosphate 3-epimerase [Thermosipho africanus TCF52B]
gi|217037762|gb|ACJ76284.1| rpe ribulose-phosphate 3-epimerase [Thermosipho africanus TCF52B]
Length = 213
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 3/211 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SILAA+ S L EI + K +IHFD MDG FVPN++FG +I ++++ ++
Sbjct: 2 VKLSGSILAANLSNLESEIKRVEKF-IDEIHFDTMDGHFVPNLTFGYPLIEAVKNCTNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+++ + H+ + + IT H E++ HI R + I G + VA+NP TP+
Sbjct: 61 IDVHLMVTNPEFHVEKLKEFDIQRITVHLETTYHIHRLISRIKEYGFEAFVALNPGTPLY 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E++I +D +L+M+VNPGF GQ+ I +I KI+ K K + S+ VDGG+ N
Sbjct: 121 LIEEIIPFLDGVLVMSVNPGFSGQKFIAKSIEKIKTLKNWKEKYGLNFSIAVDGGINETN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGAD+LV+G F ++K L
Sbjct: 181 ADVVSSAGADILVMGYGIFKNNNLEQFSKLL 211
>gi|309809941|ref|ZP_07703789.1| ribulose-phosphate 3-epimerase [Lactobacillus iners SPIN 2503V10-D]
gi|308169729|gb|EFO71774.1| ribulose-phosphate 3-epimerase [Lactobacillus iners SPIN 2503V10-D]
Length = 216
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 2 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDMEI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++ + + A+ C I+ FH E++ I + + + G K +AINP+TPV
Sbjct: 62 EIHLMSNNLPVMLPLFANLSCAILEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVEK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ + I LE+DGG+
Sbjct: 122 IVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANQGYVIPLEIDGGINDVTA 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD++V GS F
Sbjct: 182 NKVKTAGADIVVAGSYIFKH 201
>gi|255325041|ref|ZP_05366147.1| ribulose-phosphate 3-epimerase [Corynebacterium tuberculostearicum
SK141]
gi|311739501|ref|ZP_07713336.1| ribulose-phosphate 3-epimerase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|255297606|gb|EET76917.1| ribulose-phosphate 3-epimerase [Corynebacterium tuberculostearicum
SK141]
gi|311305317|gb|EFQ81385.1| ribulose-phosphate 3-epimerase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 222
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFSRLGEE++ I A +H D+MDG FVPN+SFG D+ ++ +D D
Sbjct: 6 ISPSILAADFSRLGEELAAIDTA--DWVHVDIMDGHFVPNLSFGPDITATVHRSTDKPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINPETPV 123
HLMI + + A AG I FH E+ + ++ + I +G + +I P T +
Sbjct: 64 VHLMIEEPEKWVETYAKAGAHTIIFHVEAVADDQAAVDLAQRIRDLGVRAAFSIKPGTAI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D +L+M+V PGFGGQ+ + + K+R+ + I + + +E+DGG++
Sbjct: 124 EPWLDKLHHFDEVLVMSVEPGFGGQKFMPEMLEKVRKLRRSIDDQGLDTVIEIDGGISPE 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + +AG D V GS+ F K+L DL A
Sbjct: 184 TIGAAAEAGCDAFVAGSAVFKSDDPAGVVKQLRDLAAGA 222
>gi|291003623|ref|ZP_06561596.1| ribulose-phosphate 3-epimerase [Saccharopolyspora erythraea NRRL
2338]
Length = 228
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNIT-KAG--AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSIL+ADF+RL +E++ + + G A +H DVMD FVPN++ G V++SL +D
Sbjct: 2 IAPSILSADFARLADEMAAVNGEPGHRADWLHVDVMDAHFVPNLTLGLPVVKSLLKATDI 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H E++ + + A G K G++I P TP+
Sbjct: 62 PIDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAAEDPVMLAKNLRAAGAKAGLSIKPNTPL 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
+V+ D +L+M+V PGFGGQ I + K+R+A+ L+ G ++ +E+DGG+ +
Sbjct: 122 EPYVEVLKHYDTLLVMSVEPGFGGQSFIADVLTKVRKARELVDTGHLNLVVEIDGGINAD 181
Query: 182 NIKSLVQAGADLLVVGSSFF 201
I+ +AG D V GS+ +
Sbjct: 182 TIEQAAEAGVDCFVAGSAVY 201
>gi|326382171|ref|ZP_08203863.1| ribulose-phosphate 3-epimerase [Gordonia neofelifaecis NRRL
B-59395]
gi|326198901|gb|EGD56083.1| ribulose-phosphate 3-epimerase [Gordonia neofelifaecis NRRL
B-59395]
Length = 234
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 9/224 (4%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKA----GAKQIHFDVMDGCFVPNISFGADVIRSLR 58
P+ I PSIL+ADF+ L E++ + + G +H DVMD FVPN++ G V+ SL
Sbjct: 7 PAPMIAPSILSADFANLAAEVAAVGPSDVDPGVDWVHVDVMDNHFVPNLTLGMPVVESLL 66
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+D DCHLMI A+AG +TFH E++ R I A G K G+AI
Sbjct: 67 KATDIPLDCHLMIEDPGRWAPPYAEAGAYNVTFHAEATDDPTAVARDIRAAGGKAGLAIK 126
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDG 176
P TP+ +++ + D +L+M+V PGFGGQ+ + + K+R + I G + +E+DG
Sbjct: 127 PGTPLEPYLEILQDFDTLLVMSVEPGFGGQKFMPEVLDKVRIIRKKIDSGDLRLLVEIDG 186
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G++ I+ +AG D V GS+ + G A R+ +L++ A
Sbjct: 187 GISDSTIEEAAEAGVDCFVAGSAVY---GGDDPAARVAELRRKA 227
>gi|325957110|ref|YP_004292522.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus 30SC]
gi|325333675|gb|ADZ07583.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus 30SC]
gi|327183834|gb|AEA32281.1| ribulose-phosphate 3-epimerase [Lactobacillus amylovorus GRL 1118]
Length = 216
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 123/209 (58%), Gaps = 5/209 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L ++ + AG + H D+MDG FVPN+SFG +++ R + +
Sbjct: 3 IAPSILNADNLNLENDVKDAIAAGISRFHIDIMDGHFVPNLSFGPQLVQDFKREFPMTES 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM + D I DAG D+I H E S + L + + KT +AINP+TP
Sbjct: 63 EIHLMSDNPDDLIPAFVDAGADLIELHYEAMSEKKLDYWLDYLISNDVKTSLAINPDTPS 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ ++D +L+MTV+PGFGGQ+ IE + KI+QA+ ++G I++EVDGGV + I
Sbjct: 123 DVVAKFASKLDQVLVMTVHPGFGGQKFIEDSAEKIKQAREIVG-NDIAIEVDGGVNDQTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKR 212
K AGA++ VVGS + + G+I+ R
Sbjct: 182 KIAKDAGANVFVVGSYLY-KDGDIANQVR 209
>gi|42524169|ref|NP_969549.1| ribulose-phosphate 3-epimerase [Bdellovibrio bacteriovorus HD100]
gi|39576377|emb|CAE80542.1| probable ribulose-phosphate 3-epimerase [Bdellovibrio bacteriovorus
HD100]
Length = 210
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 8/215 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L +EI + +AGA IH DVMDG FVPNI+ G V+++L+ S D
Sbjct: 2 VAPSILSADFANLEKEIKAVAQAGADWIHVDVMDGRFVPNITIGIPVVKALKKVSPLPLD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ AG D +T H ES+ +L+ I +G K G+ + P T V +
Sbjct: 62 VHLMIEEPERYVEEFVKAGSDYLTIHVESTKDAAGTLKRIRELGAKPGITLRPRTAVEEV 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++ D++L+MTV PGFGGQ + + KI + + I ++S +EVDGG+ + K
Sbjct: 122 LPLLPLCDLVLVMTVEPGFGGQSFMNDQVAKITRLRQEISSENLSCLIEVDGGINAETAK 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AD+ V GS F ++ Y + LK S
Sbjct: 182 --ICHEADVFVAGSYVFGKE----YGSAIASLKGS 210
>gi|148272955|ref|YP_001222516.1| ribulose-phosphate 3-epimerase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830885|emb|CAN01829.1| putative ribulose-phosphate 3-epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 222
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 7/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L EI + A A +H D+MD FVPN++FG ++ L+ +
Sbjct: 3 VRIEPSILSADFANLEREIQRL--ATADLVHVDIMDNHFVPNLTFGLPMVERLQQVTPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +D A+AG +TFH E++ R + +G + G+A+ P TPV
Sbjct: 61 LDIHLMIDDVDRWAPGYAEAGAASVTFHAEATREPVALARRLREIGARAGIALKPGTPVD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ E D +L+MTV PGFGGQ + T+PK+R ++ + + + L+VDGG+
Sbjct: 121 DYLELLHEFDQVLVMTVEPGFGGQSFMPETMPKLRALRSRLRESGHDVWLQVDGGIDVET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I +AGAD V GS F + G+ A +++L+++A A
Sbjct: 181 IGRAAEAGADTFVSGSGVF-RGGDPESA--ISELRRAAEA 217
>gi|315038629|ref|YP_004032197.1| ribulose-phosphate 3-epimerase [Lactobacillus amylovorus GRL 1112]
gi|312276762|gb|ADQ59402.1| ribulose-phosphate 3-epimerase [Lactobacillus amylovorus GRL 1112]
Length = 216
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 123/209 (58%), Gaps = 5/209 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L ++ + AG + H D+MDG FVPN+SFG +++ R + +
Sbjct: 3 IAPSILNADNLNLENDVKDAIAAGISRFHIDIMDGHFVPNLSFGPQLVQDFKREFPMTES 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM + D I DAG D+I H E S + L + + KT +AINP+TP
Sbjct: 63 EIHLMSDNPDDLIPAFVDAGADLIELHYEAMSEKKLDYWLDYLISNDVKTSLAINPDTPS 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ ++D +L+MTV+PGFGGQ+ IE + KI+QA+ ++G I++EVDGGV + I
Sbjct: 123 DVVAKFASKLDQVLVMTVHPGFGGQKFIEDSAEKIKQAREIVG-NDIAIEVDGGVNDQTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKR 212
K AGA++ VVGS + + G+I+ R
Sbjct: 182 KIAKDAGANVFVVGSYLY-KDGDIANQVR 209
>gi|312874626|ref|ZP_07734650.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF 2053A-b]
gi|315653697|ref|ZP_07906617.1| ribulose-phosphate 3-epimerase [Lactobacillus iners ATCC 55195]
gi|325911702|ref|ZP_08174109.1| ribulose-phosphate 3-epimerase [Lactobacillus iners UPII 143-D]
gi|311089856|gb|EFQ48276.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF 2053A-b]
gi|315489059|gb|EFU78701.1| ribulose-phosphate 3-epimerase [Lactobacillus iners ATCC 55195]
gi|325476468|gb|EGC79627.1| ribulose-phosphate 3-epimerase [Lactobacillus iners UPII 143-D]
Length = 216
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 2 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDMEI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 62 EIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVEK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ + I LE+DGG+
Sbjct: 122 IVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANQGYVIPLEIDGGINDVTA 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD++V GS F
Sbjct: 182 NKVKTAGADIVVAGSYIFKH 201
>gi|50293203|ref|XP_449013.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701877|sp|Q6FL81|RPE_CANGA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|49528326|emb|CAG61983.1| unnamed protein product [Candida glabrata]
Length = 246
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 18/212 (8%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-------- 58
I PSILA+DF+ LG E + +GA+ +H DVMDG FVPNI+ G ++ SLR
Sbjct: 6 IAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQE 65
Query: 59 --------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG 110
+ + FDCH+M+ + + A AG D TFH E++ ++ I G
Sbjct: 66 EEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYEATKDPLSLVKLIKENG 125
Query: 111 KKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI 170
K AI P TPV +L ++ +DM L+MTV PGFGGQ+ + +PK+ + +
Sbjct: 126 IKAACAIKPGTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVEALRTKF--PHM 183
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+++VDGG+ I +AGA+++V G+S F
Sbjct: 184 NIQVDGGLGKETIGVAAKAGANVIVAGTSVFT 215
>gi|84496641|ref|ZP_00995495.1| ribulose-phosphate 3-epimerase [Janibacter sp. HTCC2649]
gi|84383409|gb|EAP99290.1| ribulose-phosphate 3-epimerase [Janibacter sp. HTCC2649]
Length = 218
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 127/218 (58%), Gaps = 7/218 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PSIL+ADF+ L E+ I+ A H DVMD FVPN++ G ++ SL S
Sbjct: 1 MQISPSILSADFANLQSELEAISNA--DWAHVDVMDNHFVPNLTLGLPIVESLLKVSPIP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D A+AG +TFH E++ + R + A G + G+AI P TP A
Sbjct: 59 LDCHLMIEDPDRWAPAYAEAGAQSVTFHIEAARDPQTLARALRAAGARAGMAIKPGTPWA 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
D++ E+DM+L+MTV PGFGGQ + + K+ + + + + I ++VDGGV+++
Sbjct: 119 PYADLLPELDMVLVMTVEPGFGGQSFMADQMAKVAEVRQAVERHGGEIWIQVDGGVSAKT 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ + G S A +N+L+ A
Sbjct: 179 IEKCAEAGADVFVAGSAVY---GAESAAGAVNELRSLA 213
>gi|300361947|ref|ZP_07058124.1| possible ribulose-phosphate 3-epimerase [Lactobacillus gasseri
JV-V03]
gi|300354566|gb|EFJ70437.1| possible ribulose-phosphate 3-epimerase [Lactobacillus gasseri
JV-V03]
Length = 216
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 120/198 (60%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I ++G ++ H D+MDG FVPN+S+G ++++ RS+ +
Sbjct: 2 IAPSILNADNMHLSRDIKAAIESGIERFHIDIMDGHFVPNLSYGPELVKDFKRSFPFTKA 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++D+ + + +AGCDI+ FH E++ L + + G+AINP TPV
Sbjct: 62 EIHLMSNNLDTTLPLFVEAGCDILEFHYEATNKPDYWLNYLKDHNVRCGMAINPSTPVNK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ ++++D +L+MTV PGFGGQ+ E ++ ++ + + +I ++ L EVDGG+ +
Sbjct: 122 LKPFLNKLDQVLLMTVKPGFGGQKFEEVSVDRLTELQDMIKNENLDLPIEVDGGIDRETL 181
Query: 184 KSLVQAGADLLVVGSSFF 201
K AGA + V GS F
Sbjct: 182 KLTRDAGAKIFVAGSYIF 199
>gi|170782378|ref|YP_001710711.1| ribulose-phosphate 3-epimerase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156947|emb|CAQ02116.1| ribulose-phosphate 3-epimerase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 222
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L EI + A A +H D+MD FVPN++FG +++ L+ +
Sbjct: 3 VRIEPSILSADFANLEREIQRL--ATADLVHVDIMDNHFVPNLTFGLPMVQRLQQVTPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +D A+AG +TFH E++ R + +G + G+A+ P TPV
Sbjct: 61 LDIHLMIDDVDRWAPGYAEAGAASVTFHAEATREPVALARRLREIGARAGIALKPGTPVD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ E D +L+MTV PGFGGQ + T+PK+R ++ + + + L+VDGG+
Sbjct: 121 DYLELLHEFDQVLVMTVEPGFGGQSFMPETMPKLRALRSRLRESGHDVWLQVDGGIDVET 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I +AGAD V GS F
Sbjct: 181 IGRAAEAGADTFVSGSGVFR 200
>gi|54025573|ref|YP_119815.1| ribulose-phosphate 3-epimerase [Nocardia farcinica IFM 10152]
gi|54017081|dbj|BAD58451.1| putative ribulose-5-phosphate 3-epimerase [Nocardia farcinica IFM
10152]
Length = 227
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 4/198 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +E + G+ +H DVMD FVPN++ G V++SL +D D
Sbjct: 12 IAPSILSADFAHLADEARRVE--GSDWLHVDVMDAHFVPNLTLGLPVVQSLLKATDIPLD 69
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI A+AG +TFH E++ R I A G K G+++ P TP+
Sbjct: 70 CHLMIEDPGRWAPPYAEAGAHNVTFHAEATDDPVAVARDIRAAGAKAGLSVKPNTPIEPY 129
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+++ D +L+M+V PGFGGQ I + K R + L+ G+ + +E+DGG+ + I+
Sbjct: 130 LEILKHFDTLLVMSVEPGFGGQSFIPHVLDKARTVRRLVDSGELRLLVEIDGGINADTIE 189
Query: 185 SLVQAGADLLVVGSSFFN 202
+AG D V GS+ +N
Sbjct: 190 QAAEAGIDCFVAGSAVYN 207
>gi|224060236|ref|XP_002300099.1| predicted protein [Populus trichocarpa]
gi|118488638|gb|ABK96131.1| unknown [Populus trichocarpa]
gi|222847357|gb|EEE84904.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 127/218 (58%), Gaps = 9/218 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR ++ +
Sbjct: 6 KIAPSMLSSDFANLASEAQRMLDCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYL 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ + AG TFH E S L + I + G + GV++ P TP+
Sbjct: 66 DCHLMVTNPLDYVEPLGKAGASGFTFHVEVSRDNWGDLVQRIKSKGMRPGVSLKPGTPIE 125
Query: 125 ILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +++ ++M+L+MTV PGFGGQ+ + T+ K+R + S+ +EVDGG+
Sbjct: 126 EVYPLVEGENPVEMVLVMTVEPGFGGQKFMPETMDKVRTLRKKY--PSLDIEVDGGLGPS 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I AGA+ +V GSS F G A+ ++ L+KS
Sbjct: 184 TIDMAASAGANCIVAGSSVF---GAPDSAQVISLLRKS 218
>gi|114632628|ref|XP_508010.2| PREDICTED: ribulose-phosphate 3-epimerase isoform 2 [Pan
troglodytes]
gi|83674974|gb|ABC40668.1| rcRPE [Pan troglodytes]
Length = 228
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 115/201 (57%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLQMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A A + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFG Q+ +E +PK+ + S+ +E DGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQF--PSLDIEGDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
S + +AGA+++V GS+
Sbjct: 179 GSDTVHKCAEAGANMIVSGSA 199
>gi|32491329|ref|NP_871583.1| hypothetical protein WGLp580 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166536|dbj|BAC24726.1| rpe [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 233
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 131/225 (58%), Gaps = 12/225 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSILAA+F+ LGEEI + AGA IHFD MD +VPN+S G V++S+R
Sbjct: 1 MNNNFFISPSILAANFANLGEEIRKVIDAGADIIHFDAMDNHYVPNLSIGPIVLKSIRK- 59
Query: 61 SDSVF---DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D + + HLM ID + + I FHPES+ ++ L+ I K G+A
Sbjct: 60 -DGIIIPIEVHLMAKPIDELVVSFIKTKANCIIFHPESTKNVNFLLKLIRKNNCKAGLAF 118
Query: 118 NPETPVAILED--VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLE 173
T + L++ ++ +D++LIM+V+PGF GQ+ +S I +++ A+ LI +I +
Sbjct: 119 TLTTSLNYLKNKNIVKNLDIVLIMSVSPGFSGQKFQKSAIKRLKIARKLIDDSGYNILIG 178
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+DGGV NI + AGAD+ V+GSS F++ +Y K + ++KK
Sbjct: 179 IDGGVNDDNIYDVAYAGADIFVIGSSIFSKN---NYFKTIKNMKK 220
>gi|309807748|ref|ZP_07701682.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 01V1-a]
gi|308169008|gb|EFO71092.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 01V1-a]
Length = 216
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 2 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDMEI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++ + + A+ C I+ FH E++ I + + + G K +AINP+TPV
Sbjct: 62 EIHLMSNNLPVMLPLFANLSCAILEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVEK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L +D+ID +L+M+V PGFGGQ+ I KI K ++ I LE+DGG+
Sbjct: 122 LVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVTA 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ GAD++V GS F
Sbjct: 182 NKVKAVGADIVVAGSYIFKH 201
>gi|255629039|gb|ACU14864.1| unknown [Glycine max]
Length = 228
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 121/202 (59%), Gaps = 10/202 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR ++
Sbjct: 6 KIAPSMLSSDFANLASEAQRMLHFGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKGYL 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ +A AG TFH E+S + ++ I + G GVA+ P TP+
Sbjct: 66 DCHLMVTNPLDYVEPLAKAGASGFTFHVETSKDNWEELIQRIKSHGMTPGVALKPGTPIE 125
Query: 125 ILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
+ +++ ++M+L+MTV PGFGGQ+ + + K+R ++ K+ S+ +EVDGG+
Sbjct: 126 EVYPLVEAGNPVEMVLVMTVEPGFGGQKFMPEMMDKVR----ILRKKYPSLDIEVDGGLG 181
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
I AGA+ +V GSS F
Sbjct: 182 PSTIDVAASAGANCIVAGSSVF 203
>gi|325912970|ref|ZP_08175343.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners UPII
60-B]
gi|325477650|gb|EGC80789.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners UPII
60-B]
Length = 216
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 2 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDMEI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 62 EIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVEK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ I LE+DGG+
Sbjct: 122 IVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVTA 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD++V GS F
Sbjct: 182 NKVKTAGADIVVAGSYIFKH 201
>gi|324513360|gb|ADY45493.1| Ribulose-phosphate 3-epimerase [Ascaris suum]
Length = 251
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 13/213 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDSV 64
I PSIL AD S L E + AGA +H DVMDG FVPN+SFG ++ LR+ +
Sbjct: 29 ICPSILNADLSNLAAECQRLLVAGADYLHLDVMDGHFVPNLSFGHPIVECLRANLGPEPF 88
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES------SPHIRRSLRTIHAMGKKTGVAIN 118
FD HLM+++ + + + +AG + TFH E+ + ++R + G K G+AI
Sbjct: 89 FDVHLMVTNPEQWLIPMQEAGANQFTFHWEAVHAKGGDDAVYAAIRAVRRAGLKVGLAIK 148
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P+TPV + ++ID L+MTV PGFGGQ+ + +PK+RQ + ++++VDGGV
Sbjct: 149 PKTPVQTVLQFANDIDNALVMTVEPGFGGQKFMSDMMPKVRQIRDR--HPHLNIQVDGGV 206
Query: 179 TSRNIKSLVQAGADLLVVGSSFF---NQKGEIS 208
N++ +AGA+L+V G+ +QK IS
Sbjct: 207 NIDNVEVCAEAGANLIVSGTGVIKVPDQKKVIS 239
>gi|330444598|ref|YP_004377584.1| ribulose-phosphate 3-epimerase [Chlamydophila pecorum E58]
gi|328807708|gb|AEB41881.1| ribulose-phosphate 3-epimerase [Chlamydophila pecorum E58]
Length = 230
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 116/203 (57%), Gaps = 3/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSI+ AD S LG+E+ + +AGA IH DVMDG FVPNI+FG +I ++ +D
Sbjct: 12 IEVAPSIMGADLSCLGKEVKRVEEAGADLIHIDVMDGHFVPNITFGPGIIAAINRSTDLF 71
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ H M+ + I AG D I H E+S +I+ L I G + G+A +PET +
Sbjct: 72 LEVHAMVYNPFDFIEDFVRAGADRIIVHFEASENIKELLSYIKKCGVQAGLAFSPETSME 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSR 181
+ + D++L+M+V+PGF GQ IE T KI R +G + +EVDGG+ R
Sbjct: 132 FIPSFLPYCDVVLLMSVSPGFCGQGFIEETTEKIAFTRHVIERLGLKECLVEVDGGIDPR 191
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
+ K +AG D+LV S F+ +
Sbjct: 192 SAKLCREAGVDILVAASYLFDSQ 214
>gi|312879346|ref|ZP_07739146.1| ribulose-5-phosphate 3-epimerase [Aminomonas paucivorans DSM 12260]
gi|310782637|gb|EFQ23035.1| ribulose-5-phosphate 3-epimerase [Aminomonas paucivorans DSM 12260]
Length = 235
Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 128/216 (59%), Gaps = 14/216 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQ--IHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
+ PS+L+A+ L E S I + G ++ +H DVMDG FVPN+++G +R+LR+ Y D+
Sbjct: 12 LAPSLLSAN--PLSVEAS-IARLGGEEDWLHVDVMDGHFVPNLTYGPGFVRALRARYPDA 68
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + ++ A+AG D++T H E++PH+ R L I G GV++NP TPV
Sbjct: 69 FLDVHLMVQPPEDFVDSFAEAGADLLTVHGEATPHLHRLLGRIREKGCAAGVSLNPGTPV 128
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS-----LEVDGGV 178
+ V+ D++L+M+VNPGFGGQ+ + + K+ AL +R++ +E+DGG+
Sbjct: 129 EWIAPVLHLADLVLLMSVNPGFGGQKFLPEVLEKV---TALCRRRAVRGESFLVEMDGGL 185
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N+ +V AG ++V GS+ F +R+
Sbjct: 186 GPDNVDLVVSAGCQVVVAGSAVFGAPDPAETLRRMR 221
>gi|259501634|ref|ZP_05744536.1| ribulose-phosphate 3-epimerase [Lactobacillus iners DSM 13335]
gi|259166919|gb|EEW51414.1| ribulose-phosphate 3-epimerase [Lactobacillus iners DSM 13335]
Length = 230
Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 16 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDMEI 75
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 76 EIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVEK 135
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ I LE+DGG+
Sbjct: 136 IVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVTA 195
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD++V GS F
Sbjct: 196 NKVKVAGADIVVAGSYIFKH 215
>gi|329921057|ref|ZP_08277580.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners SPIN
1401G]
gi|328934964|gb|EGG31453.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners SPIN
1401G]
Length = 216
Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 2 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDMEI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 62 EIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVEK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L +D+ID +L+M+V PGFGGQ+ I KI K ++ I LE+DGG+
Sbjct: 122 LVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVTA 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ GAD++V GS F
Sbjct: 182 NKVKAVGADIVVAGSYIFKH 201
>gi|293192810|ref|ZP_06609705.1| ribulose-phosphate 3-epimerase [Actinomyces odontolyticus F0309]
gi|292820057|gb|EFF79055.1| ribulose-phosphate 3-epimerase [Actinomyces odontolyticus F0309]
Length = 220
Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E++ I AGA H DVMD FVPN+S+G V ++ D
Sbjct: 5 ISPSILNCDIANLRGELTKI--AGADIAHVDVMDNHFVPNLSWGLPVAEAVVKSGILPVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+ GC+ +TFH E++ R R +H +G +TG+A+ P T +A
Sbjct: 63 AHLMIEDPDRWAPQYAEVGCESVTFHAEAAAAPLRLARELHRIGARTGLALKPATDIAPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
D+++E DMILIMTV PGFGGQ IE IPKI + + I +S++VDGG++ I+
Sbjct: 123 VDILNEFDMILIMTVEPGFGGQSFIEQMIPKIERTRTAINAAGLQVSIQVDGGISRATIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGAD V GS+ F + L +L +
Sbjct: 183 RAAAAGADNFVAGSAVFRADDAHREVEALRELANA 217
>gi|302191159|ref|ZP_07267413.1| ribulose-phosphate 3-epimerase [Lactobacillus iners AB-1]
gi|309806264|ref|ZP_07700277.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 03V1-b]
gi|312871615|ref|ZP_07731707.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF
3008A-a]
gi|312871912|ref|ZP_07731994.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF
2062A-h1]
gi|308167248|gb|EFO69414.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 03V1-b]
gi|311092489|gb|EFQ50851.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF
2062A-h1]
gi|311092840|gb|EFQ51192.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF
3008A-a]
Length = 216
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 2 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDMEI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 62 EIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVEK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ I LE+DGG+
Sbjct: 122 IVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVTA 181
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD++V GS F
Sbjct: 182 NKVKVAGADIVVAGSYIFKH 201
>gi|167757021|ref|ZP_02429148.1| hypothetical protein CLORAM_02570 [Clostridium ramosum DSM 1402]
gi|237735909|ref|ZP_04566390.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167703196|gb|EDS17775.1| hypothetical protein CLORAM_02570 [Clostridium ramosum DSM 1402]
gi|229381654|gb|EEO31745.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 213
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+A+F+ L EEI+ I A IH+DVMDG FVPNISFG +++ + +D
Sbjct: 2 VKVAPSLLSANFAYLKEEINAIK--AADWIHYDVMDGHFVPNISFGYSILKDVSKVTDMY 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI+ +++ ++ +I FH E + I + I + G++I P+TP
Sbjct: 60 LDVHLMITDPAKYVDNFINSNASLIVFHYEAVAEDKINELIAHIKEHDVEVGLSIKPDTP 119
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V +L+ ++E+D++L+M+V PGFGGQ+ + + KI Q L + + +EVDGG+
Sbjct: 120 VEVLKPFLNELDVVLVMSVEPGFGGQKFNSAAVDKIAQLATLRKENNYHYLIEVDGGINE 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K AG D+LV GS F G Y K + LK
Sbjct: 180 STSKLCNDAGVDVLVAGSYVF---GSDDYTKAIESLK 213
>gi|325261357|ref|ZP_08128095.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
gi|324032811|gb|EGB94088.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
Length = 222
Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 115/199 (57%), Gaps = 3/199 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ + +L E + + + +H D+MDG +VPN + G D ++ LR +D
Sbjct: 3 KISPSMMCVEIDKLNEYLKIFEEEKIEYLHIDIMDGEYVPNYTLGTDYVKQLRKATDIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+S + I + + H ES+ H++++L+ I A G K+ VAINP T V
Sbjct: 63 DVHLMINSPERKIEWFDFQEGEYVAVHAESTQHLQKALQAIRAAGAKSMVAINPSTRVED 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRN 182
L+ V+D++D +L+MTVNPGF GQ+ I TI KI + + G + I +EVDG V+
Sbjct: 123 LQYVLDDMDGLLVMTVNPGFAGQKAIPQTIQKIEDCRNYLDARGYQHIEIEVDGNVSYEL 182
Query: 183 IKSLVQAGADLLVVGSSFF 201
+ + AD+ V GSS F
Sbjct: 183 AGEMSKKHADIFVAGSSSF 201
>gi|307297432|ref|ZP_07577238.1| ribulose-phosphate 3-epimerase [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916692|gb|EFN47074.1| ribulose-phosphate 3-epimerase [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 215
Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD + L E+ + A +H DVMDG FVPNI+FG ++ +L
Sbjct: 3 RISPSILAADLTELAREVIRVRDA--DYLHIDVMDGMFVPNITFGVPIMEALGRLHHPPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI ++ A G + H E + H+ R L I G + V +NP TPV++
Sbjct: 61 DVHLMIEDPSRYVKEYAALGAKNLHVHVEGNYHLHRLLGQIRETGSRAFVVLNPSTPVSL 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNI 183
L++V+ D +L+MTVNPG+ GQ+ I KI + +R + E VDGGV+ N
Sbjct: 121 LDEVLSCADGVLVMTVNPGYTGQEFIPEAAKKIDVLDRIRTERDLKFEIAVDGGVSLDNA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ LV GAD+L++G++ F + +++ +LK+
Sbjct: 181 QDLVNRGADILIMGAAVFRSENPSVVVRKIKELKR 215
>gi|195442232|ref|XP_002068862.1| GK17799 [Drosophila willistoni]
gi|194164947|gb|EDW79848.1| GK17799 [Drosophila willistoni]
Length = 223
Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+I PSIL AD + L E + GA +H DVMDG FVPN++FG +++ LR+ +
Sbjct: 8 KIGPSILNADLANLYTESQKLLDNGADYLHLDVMDGSFVPNLTFGHPMVKCLRNNIKTAF 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+S + I +ADAG ++ TFH E + + R + G K G+AI P T V
Sbjct: 68 FETHMMVSKPEQWIAPMADAGVNLYTFHIEPVEDVCKVCRLVQEAGMKVGLAIKPGTKVE 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L + + D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV + I+
Sbjct: 128 ELTEYMSIADLVLVMTVEPGFGGQSFMADMMPKVEWLRQ--NYPNMDIEVDGGVGPKTIE 185
Query: 185 SLVQAGADLLVVGSS 199
+AGA+++V G++
Sbjct: 186 CCAKAGANMIVSGTA 200
>gi|15604840|ref|NP_219624.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis D/UW-3/CX]
gi|76788836|ref|YP_327922.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis A/HAR-13]
gi|6226026|sp|O84123|RPE_CHLTR RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|3328520|gb|AAC67712.1| Ribulose-P Epimerase [Chlamydia trachomatis D/UW-3/CX]
gi|76167366|gb|AAX50374.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis A/HAR-13]
gi|297748250|gb|ADI50796.1| Ribulose-phosphate 3-epimerase [Chlamydia trachomatis D-EC]
gi|297749130|gb|ADI51808.1| Ribulose-phosphate 3-epimerase [Chlamydia trachomatis D-LC]
Length = 233
Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 120/203 (59%), Gaps = 4/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSI+ AD + +G E NI ++GA IH DVMDG FVPNI+FG V+ ++ ++
Sbjct: 11 VLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELF 70
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ H MI + + AG D I H E++ +I+ + I G + GVA +PET +
Sbjct: 71 LEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPETSIE 130
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKR-SISLEVDGGVTS 180
+ I D+IL+M+V+PGF GQ+ I TI +I +QA ++G+ S +EVDGG+
Sbjct: 131 FVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGGIDK 190
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
+ ++ +AGAD+LV S FF +
Sbjct: 191 ESARACREAGADILVAASYFFEK 213
>gi|242049774|ref|XP_002462631.1| hypothetical protein SORBIDRAFT_02g029250 [Sorghum bicolor]
gi|241926008|gb|EER99152.1| hypothetical protein SORBIDRAFT_02g029250 [Sorghum bicolor]
Length = 225
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 120/200 (60%), Gaps = 6/200 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 5 KIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ AG TFH E + + + +++I + G + GV++ P TPV
Sbjct: 65 DCHLMVTNPSDYVEPFGKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPGTPVE 124
Query: 125 ---ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
L + + ++++L+MTV PGFGGQ+ + + K+R + S+ +EVDGG+
Sbjct: 125 EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKY--PSLDIEVDGGLGPS 182
Query: 182 NIKSLVQAGADLLVVGSSFF 201
I AGA+ +V GSS F
Sbjct: 183 TIDVAASAGANCIVAGSSIF 202
>gi|255310922|ref|ZP_05353492.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 6276]
gi|255317222|ref|ZP_05358468.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 6276s]
Length = 228
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 120/203 (59%), Gaps = 4/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSI+ AD + +G E NI ++GA IH DVMDG FVPNI+FG V+ ++ ++
Sbjct: 6 VLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ H MI + + AG D I H E++ +I+ + I G + GVA +PET +
Sbjct: 66 LEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPETSIE 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKR-SISLEVDGGVTS 180
+ I D+IL+M+V+PGF GQ+ I TI +I +QA ++G+ S +EVDGG+
Sbjct: 126 FVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGGIDK 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
+ ++ +AGAD+LV S FF +
Sbjct: 186 ESARACREAGADILVAASYFFEK 208
>gi|166154342|ref|YP_001654460.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 434/Bu]
gi|166155217|ref|YP_001653472.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237802551|ref|YP_002887745.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis B/Jali20/OT]
gi|237804468|ref|YP_002888622.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis B/TZ1A828/OT]
gi|301335594|ref|ZP_07223838.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis L2tet1]
gi|165930330|emb|CAP03816.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 434/Bu]
gi|165931205|emb|CAP06770.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231272768|emb|CAX09674.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273785|emb|CAX10568.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis B/Jali20/OT]
gi|296435637|gb|ADH17811.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis G/9768]
gi|296436560|gb|ADH18730.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis G/11222]
gi|296437497|gb|ADH19658.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis G/11074]
gi|297139996|gb|ADH96754.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis G/9301]
Length = 228
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 120/203 (59%), Gaps = 4/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSI+ AD + +G E NI ++GA IH DVMDG FVPNI+FG V+ ++ ++
Sbjct: 6 VLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ H MI + + AG D I H E++ +I+ + I G + GVA +PET +
Sbjct: 66 LEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPETSIE 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKR-SISLEVDGGVTS 180
+ I D+IL+M+V+PGF GQ+ I TI +I +QA ++G+ S +EVDGG+
Sbjct: 126 FVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGGIDK 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
+ ++ +AGAD+LV S FF +
Sbjct: 186 ESARACREAGADILVAASYFFEK 208
>gi|171742898|ref|ZP_02918705.1| hypothetical protein BIFDEN_02015 [Bifidobacterium dentium ATCC
27678]
gi|171278512|gb|EDT46173.1| hypothetical protein BIFDEN_02015 [Bifidobacterium dentium ATCC
27678]
Length = 242
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +
Sbjct: 21 TMTIQIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVARICQVT 78
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 79 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 138
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 139 PVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVS 198
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ + +AGAD+LV GS+ + + + D ++A
Sbjct: 199 PKTAHIVAEAGADVLVAGSAVYGAESPAEAIDSIRDKAEAAF 240
>gi|297380607|gb|ADI35494.1| ribulose-phosphate 3-epimerase [Helicobacter pylori v225d]
Length = 217
Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 125/217 (57%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNAGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I L QAG D++V GS F K + L ++++S
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQS 215
>gi|317014966|gb|ADU82402.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Gambia94/24]
Length = 217
Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 120/202 (59%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G ++ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVILENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I +G GV +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLKPQIISIHAENEKHPHRVLQLIKNLGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|313900355|ref|ZP_07833849.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312954904|gb|EFR36578.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 214
Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 7/214 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A ++ L EE+ + +AG H D+MDG FVPNIS G ++++R+ + + D
Sbjct: 3 LCPSMMCASYANLEEEVRALEEAGTDIFHCDIMDGSFVPNISMGLMDVKAVRALTKKMVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I+ DAG D+I HPES P ++L I + GK +G+A+NP+T ++ +
Sbjct: 63 VHLMIDHPADKIDWFLDAGADLIYIHPESEPQAMKTLMYIRSRGKLSGLAVNPDTSLSAV 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ---AKALIGKRSISLEVDGGVTSRNI 183
++++ D +LIM+V PGF GQ I+S KIR+ K + G R I +DG + I
Sbjct: 123 KELLPHCDYLLIMSVFPGFAGQTFIDSVDTKIRELIACKKMYGYRII---LDGACSPAVI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ D V+G+S GE SY + +N L+
Sbjct: 180 QEYHALSVDGFVLGTSALFH-GEGSYVENMNLLR 212
>gi|226497150|ref|NP_001149850.1| ribulose-phosphate 3-epimerase [Zea mays]
gi|195635057|gb|ACG36997.1| ribulose-phosphate 3-epimerase [Zea mays]
gi|223974449|gb|ACN31412.1| unknown [Zea mays]
Length = 225
Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 119/200 (59%), Gaps = 6/200 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 5 KIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM++ ++ AG TFH E + + + +++I + G + GV++ P TPV
Sbjct: 65 DCHLMVTKPSDYVEPFGKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPGTPVE 124
Query: 125 ---ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
L + + ++++L+MTV PGFGGQ+ + + K+R + S+ +EVDGG+
Sbjct: 125 EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRKKY--PSLDIEVDGGLGPS 182
Query: 182 NIKSLVQAGADLLVVGSSFF 201
I AGA+ +V GSS F
Sbjct: 183 TIDVAASAGANCIVAGSSIF 202
>gi|229817660|ref|ZP_04447942.1| hypothetical protein BIFANG_02931 [Bifidobacterium angulatum DSM
20098]
gi|229785449|gb|EEP21563.1| hypothetical protein BIFANG_02931 [Bifidobacterium angulatum DSM
20098]
Length = 221
Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF L ++ I+ A +H DVMD FVPN++ G +++ + +D
Sbjct: 2 SIEIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVKRICEVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 120 EPIFDILDEFDMILIMTVEPGFGGQKFLDNQMGKVRRLRDEITRRGLKTKIQVDGGVSPK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++ ++ A A
Sbjct: 180 TAHIVAEAGADVLVAGSAVY---GAPNPAEAIDSIRDKAAA 217
>gi|315585932|gb|ADU40313.1| ribulose-phosphate 3-epimerase [Helicobacter pylori 35A]
gi|317179730|dbj|BAJ57518.1| ribulose-phosphate 3-epimerase [Helicobacter pylori F30]
Length = 217
Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTKMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|154508792|ref|ZP_02044434.1| hypothetical protein ACTODO_01301 [Actinomyces odontolyticus ATCC
17982]
gi|153798426|gb|EDN80846.1| hypothetical protein ACTODO_01301 [Actinomyces odontolyticus ATCC
17982]
Length = 220
Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E++ I AGA H DVMD FVPN+S+G V ++ D
Sbjct: 5 ISPSILNCDIANLRGELTKI--AGADIAHVDVMDNHFVPNLSWGLPVAEAVVKSGILPVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+ GC+ +TFH E++ R R +H +G + G+A+ P T +A
Sbjct: 63 AHLMIEDPDRWAPQYAEVGCESVTFHAEAAAAPLRLARELHRIGARAGLALKPATDIAPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
D+++E DMILIMTV PGFGGQ IE IPKI + + I +S++VDGG++ I+
Sbjct: 123 VDILNEFDMILIMTVEPGFGGQSFIEQMIPKIERTRTAINAAGLQVSIQVDGGISRATIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGAD V GS+ F + L +L +
Sbjct: 183 RAAEAGADNFVAGSAVFRADDAHREVEALRELANA 217
>gi|116512342|ref|YP_809558.1| ribulose-5-phosphate 3-epimerase [Lactococcus lactis subsp.
cremoris SK11]
gi|116107996|gb|ABJ73136.1| ribulose-5-phosphate 3-epimerase [Lactococcus lactis subsp.
cremoris SK11]
Length = 216
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A+F+ L ++ ++ AG H D+MDG FVPN G +RS +D D
Sbjct: 6 LCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSVTDKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ + +D G DII HPE+ H +L I A GKK G+AINP T + +
Sbjct: 66 VHLMVQNPSNYVEMFSDLGADIIYIHPEADIHPACTLDKIRAKGKKVGIAINPGTSIEAV 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+++ +D +IMTVNPGF GQ+ +E KI +A L + + VDG ++ + I+ L
Sbjct: 126 IELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKAVLLSKQFDFKVMVDGAISPQKIEEL 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ G + ++G+S K + +Y +N+L+
Sbjct: 186 SKLGVEGFILGTSALFGKHK-NYETIINELR 215
>gi|309800906|ref|ZP_07695038.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium JCVIHMP022]
gi|308222442|gb|EFO78722.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium JCVIHMP022]
Length = 224
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +
Sbjct: 3 TMTIQIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVARICQVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 61 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 121 PVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ + +AGAD+LV GS+ + + + D ++A
Sbjct: 181 PKTAHIVAEAGADVLVAGSAVYGAESPAEAIGSIRDKAEAAF 222
>gi|320105032|ref|YP_004180623.1| Ribulose-phosphate 3-epimerase [Isosphaera pallida ATCC 43644]
gi|319752314|gb|ADV64074.1| Ribulose-phosphate 3-epimerase [Isosphaera pallida ATCC 43644]
Length = 255
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 119/222 (53%), Gaps = 9/222 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA DF R+ + + I + G + +H DVMDG FVPN+++G VI R + VFD
Sbjct: 26 ITPSLLACDFGRMRDVLDRIARIGVQAVHLDVMDGRFVPNLTYGPPVIARWREATHLVFD 85
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI- 125
HLMI + I+ ADAGCD + H E+ L I A G + G+A+NP T + +
Sbjct: 86 AHLMIVEPERWIDPFADAGCDTLVVHLEAVEQPWPVLERIKARGLRAGIAVNPPTLLRLD 145
Query: 126 -LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ + +D L+M+V PGFGGQ S + K+ K + + + +DGG+ +
Sbjct: 146 PVPSWLALLDSALVMSVMPGFGGQVFDPSVLSKVAALKQ--ARPGLRVAIDGGIGPDTLA 203
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYA-----KRLNDLKKSAL 221
+ V G D LV+GS+FF ++ A +RL + S L
Sbjct: 204 AAVATGVDQLVIGSAFFRADDQLEVAWSDLNQRLRQVNPSPL 245
>gi|255348482|ref|ZP_05380489.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 70]
gi|255503024|ref|ZP_05381414.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 70s]
gi|255506695|ref|ZP_05382334.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis D(s)2923]
gi|289525163|emb|CBJ14637.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis Sweden2]
gi|296434709|gb|ADH16887.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis E/150]
gi|296438427|gb|ADH20580.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis E/11023]
Length = 228
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 120/203 (59%), Gaps = 4/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSI+ AD + +G E NI ++GA IH DVMDG FVPNI+FG V+ ++ ++
Sbjct: 6 VLVAPSIMGADLACIGREARNIEESGADFIHIDVMDGHFVPNITFGPGVVAAINRSTELF 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ H MI + + AG D I H E++ +I+ + I G + GVA +PET +
Sbjct: 66 LEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIVSYIQKCGVQAGVAFSPETSIE 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKR-SISLEVDGGVTS 180
+ I D+IL+M+V+PGF GQ+ I TI +I +QA ++G+ S +EVDGG+
Sbjct: 126 FVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGGIDK 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
+ ++ +AGAD+LV S FF +
Sbjct: 186 ESARACREAGADILVAASYFFEK 208
>gi|306822712|ref|ZP_07456090.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|304554257|gb|EFM42166.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
Length = 242
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +
Sbjct: 21 TMTIQIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVARICQVT 78
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 79 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 138
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 139 PVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVS 198
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ + +AGAD+LV GS+ + + + D ++A
Sbjct: 199 PKTAHIVAEAGADVLVAGSAVYGAESPAEAIGSIRDKAEAAF 240
>gi|212715807|ref|ZP_03323935.1| hypothetical protein BIFCAT_00708 [Bifidobacterium catenulatum DSM
16992]
gi|212661174|gb|EEB21749.1| hypothetical protein BIFCAT_00708 [Bifidobacterium catenulatum DSM
16992]
Length = 224
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 129/221 (58%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +D
Sbjct: 5 TIQIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVGRICEVTDL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 63 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRTMGCKACFAVRPAEPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R ++ ++VDGGV+ +
Sbjct: 123 EPIFDILDEFDMILIMTVEPGFGGQRFLDNQMSKVRRLRDEITRRGLATKIQVDGGVSPK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++ +++ A A
Sbjct: 183 TAHIVAEAGADVLVAGSAVY---GAENPAEAIDSIREKAEA 220
>gi|283456077|ref|YP_003360641.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium Bd1]
gi|283102711|gb|ADB09817.1| Rpe1 Ribulose-phosphate 3-epimerase [Bifidobacterium dentium Bd1]
Length = 221
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 123/220 (55%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +D
Sbjct: 2 TIQIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVARICQVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 120 EPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVSPK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGAD+LV GS+ + + + D ++A
Sbjct: 180 TAHIVAEAGADVLVAGSAVYGAESPAEAIDSIRDKAEAAF 219
>gi|261840223|gb|ACX99988.1| ribulose-phosphate 3-epimerase [Helicobacter pylori 52]
Length = 217
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNAGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLRVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ L QAG D++V GS F K
Sbjct: 179 VFELQQAGVDVVVSGSYIFKSK 200
>gi|324526396|gb|ADY48666.1| Ribulose-phosphate 3-epimerase [Ascaris suum]
Length = 250
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 10/212 (4%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-- 60
P I PS+L AD S L E + AGA +H DVMDG FVPN++FG VI LR
Sbjct: 5 PRAIICPSVLNADLSNLTAECKKLLNAGADYLHLDVMDGHFVPNLTFGHTVIECLRMNLG 64
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP------HIRRSLRTIHAMGKKTG 114
S FD HLM+++ + I + AG ++ TFH E++ I ++ I G K G
Sbjct: 65 SAPFFDVHLMVTNPEQWIQPMKKAGANLFTFHLEAAEVKDGDDAIYATIHAIKRAGMKVG 124
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
+AI P TPV L +ID LIM+V PGFGGQ+ I + + K+R+ + + +++
Sbjct: 125 IAIKPRTPVEKLLKFATQIDHALIMSVEPGFGGQKFIPAMMSKVRKLRN--AYPLLDIQI 182
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
DGG+ N+ AGA+++V G++ Q +
Sbjct: 183 DGGINLTNVDQCAYAGANVIVSGTAIVTQNNQ 214
>gi|317013347|gb|ADU83955.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Lithuania75]
Length = 217
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 120/202 (59%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I +G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLKPQIISIHAENEKHPHRVLQLIKNLGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|308183651|ref|YP_003927778.1| ribulose-phosphate 3-epimerase [Helicobacter pylori PeCan4]
gi|308065836|gb|ADO07728.1| ribulose-phosphate 3-epimerase [Helicobacter pylori PeCan4]
Length = 217
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|154487357|ref|ZP_02028764.1| hypothetical protein BIFADO_01207 [Bifidobacterium adolescentis
L2-32]
gi|154083875|gb|EDN82920.1| hypothetical protein BIFADO_01207 [Bifidobacterium adolescentis
L2-32]
Length = 224
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 129/223 (57%), Gaps = 7/223 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +
Sbjct: 3 TMTIQIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVARICQVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 61 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 121 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + +AGAD+LV GS+ + G + A+ ++ +++ A A
Sbjct: 181 PKTAHIVAEAGADVLVAGSAVY---GAENPAEAIDSIREKAEA 220
>gi|227547224|ref|ZP_03977273.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212344|gb|EEI80240.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 222
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G I+FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLREMGCKACFAVRPTEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++D++ A A
Sbjct: 181 TAHIVAEAGADVLVAGSAVY---GAENPAQAIDDIRTKAEA 218
>gi|119025811|ref|YP_909656.1| ribulose-phosphate 3-epimerase [Bifidobacterium adolescentis ATCC
15703]
gi|118765395|dbj|BAF39574.1| ribulose-phosphate 3-epimerase [Bifidobacterium adolescentis ATCC
15703]
Length = 224
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 129/223 (57%), Gaps = 7/223 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +
Sbjct: 3 TMTIQIAPSILSADFCNLERDLKAIS--NADLVHVDVMDHHFVPNLTLGEPIVARICQVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 61 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 121 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMTKVRRLRDEITRRGLKTKIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + +AGAD+LV GS+ + G + A+ ++ +++ A A
Sbjct: 181 PKTAHIVAEAGADVLVAGSAVY---GAENPAEAIDSIREKAEA 220
>gi|239622170|ref|ZP_04665201.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312132737|ref|YP_004000076.1| rpe [Bifidobacterium longum subsp. longum BBMN68]
gi|239515361|gb|EEQ55228.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|311773698|gb|ADQ03186.1| Rpe [Bifidobacterium longum subsp. longum BBMN68]
Length = 222
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G I+FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLREMGCKACFAVRPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++D++ A A
Sbjct: 181 TAHIVAEAGADVLVAGSAVY---GAENPAQAIDDIRTKAEA 218
>gi|188528323|ref|YP_001911010.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Shi470]
gi|188144563|gb|ACD48980.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Shi470]
Length = 217
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGIMPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|317181233|dbj|BAJ59019.1| ribulose-phosphate 3-epimerase [Helicobacter pylori F32]
Length = 217
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTKMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|23335099|ref|ZP_00120337.1| COG0036: Pentose-5-phosphate-3-epimerase [Bifidobacterium longum
DJO10A]
gi|189439343|ref|YP_001954424.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum DJO10A]
gi|189427778|gb|ACD97926.1| Pentose-5-phosphate-3-epimerase [Bifidobacterium longum DJO10A]
Length = 222
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G I+FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLREMGCKACFAVRPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++D++ A A
Sbjct: 181 TAHIVAEAGADVLVAGSAVY---GAENPAQAIDDIRAKAEA 218
>gi|296454168|ref|YP_003661311.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum JDM301]
gi|296183599|gb|ADH00481.1| Ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum JDM301]
Length = 222
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICEVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L D++DE DM+L+MTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPLFDILDEFDMVLVMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++D++ A A
Sbjct: 181 TAHIVAEAGADVLVAGSAVY---GAENPAQAIDDIRTKAEA 218
>gi|219879828|ref|NP_001137381.1| rcRPE protein [Homo sapiens]
gi|83674972|gb|ABC40667.1| rcRPE [Homo sapiens]
gi|119570040|gb|EAW49655.1| hCG2024410 [Homo sapiens]
gi|187952553|gb|AAI37244.1| LOC729020 protein [Homo sapiens]
gi|187953497|gb|AAI37243.1| LOC729020 protein [Homo sapiens]
gi|187956822|gb|AAI57830.1| LOC729020 protein [Homo sapiens]
gi|187957322|gb|AAI57876.1| LOC729020 protein [Homo sapiens]
gi|219521031|gb|AAI71885.1| LOC729020 protein [Homo sapiens]
gi|219521137|gb|AAI71806.1| LOC729020 protein [Homo sapiens]
Length = 228
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG + + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAKCLQMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A A + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFG Q+ +E +PK+ + S+ +E DGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQF--PSLDIEGDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
S + +AGA++ V GS+
Sbjct: 179 GSDTVHKCAEAGANMTVSGSA 199
>gi|317182754|dbj|BAJ60538.1| ribulose-phosphate 3-epimerase [Helicobacter pylori F57]
Length = 217
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTKMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNAGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|331243054|ref|XP_003334171.1| ribulose-phosphate 3-epimerase [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309313161|gb|EFP89752.1| ribulose-phosphate 3-epimerase [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 235
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 127/206 (61%), Gaps = 12/206 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PS+LA+DF L E + K GA+ +H DVMDG FVPNI+ GA V+ S+ ++ +
Sbjct: 6 IAPSVLASDFGSLTAECKKVIKDGAEWLHMDVMDGHFVPNITIGAPVLASVAKTVEGAYM 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFH-------PESSPHIRRS-LRTIHAMGKKTGVAI 117
DCH+M++ I+ +A AG TFH P+S+ H + + IHA G + GVAI
Sbjct: 66 DCHMMVADPMRWIDDVAGAGGASYTFHLEACFQKPDSADHDPLAIIDRIHASGMRAGVAI 125
Query: 118 NPETPVAILEDVI-DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
+P+TP + D I + D++L+MTV+PG GGQ+ I++ + K+ + +A ++ I +VDG
Sbjct: 126 SPDTPSEKITDSIAAKADLLLVMTVHPGRGGQKFIDACVVKVAELRARFPQKDI--QVDG 183
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFN 202
GV + +K +AG++++V G++ F
Sbjct: 184 GVGPKTVKPCAEAGSNVVVAGTAVFG 209
>gi|15612504|ref|NP_224157.1| ribulose-phosphate 3-epimerase [Helicobacter pylori J99]
gi|6647760|sp|Q9ZJ75|RPE_HELPJ RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|4156059|gb|AAD07015.1| RIBULOSE-PHOSPHATE 3-EPIMERASE [Helicobacter pylori J99]
Length = 217
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 120/202 (59%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G ++ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVILENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I + G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIKSSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFESK 200
>gi|291516897|emb|CBK70513.1| ribulose-5-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum F8]
Length = 222
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++D++ A A
Sbjct: 181 TAHIVAEAGADVLVAGSAVY---GAENPAQAIDDIRTKAEA 218
>gi|313679260|ref|YP_004056999.1| ribulose-phosphate 3-epimerase [Oceanithermus profundus DSM 14977]
gi|313151975|gb|ADR35826.1| Ribulose-phosphate 3-epimerase [Oceanithermus profundus DSM 14977]
Length = 221
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + +LAAD RL EE++ + +AGA IH DVMDG F P I + R++R +
Sbjct: 2 PETLLSVGVLAADLGRLAEELARLEEAGADWIHLDVMDGVFAPQILGDVALFRAVRRLTS 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + + H+ A G D IT H E+ PH+ R++ +G + GVA+NP T
Sbjct: 62 LPLDVHLMVQNPERHVA--AFEGADWITVHAEAGPHLHRAVAEAKRVGARAGVALNPGTH 119
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVT 179
++ + ++DEID++L + V+PGF G + T+ K+ Q + +G + + VDGG+
Sbjct: 120 ISGVVALVDEIDLVLFVAVDPGFPGGGFVRGTLRKVAQLRRKLDDLGVSGVRIGVDGGID 179
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKG 205
N + +GAD++V GS+ F G
Sbjct: 180 LTNAAEVAASGADVVVSGSAVFKGAG 205
>gi|15645996|ref|NP_208177.1| ribulose-phosphate 3-epimerase [Helicobacter pylori 26695]
gi|2829457|sp|P56188|RPE_HELPY RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2314553|gb|AAD08425.1| D-ribulose-5-phosphate 3 epimerase (rpe) [Helicobacter pylori
26695]
Length = 217
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 126/217 (58%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + A II+ H E+ H R L+ I +G G+ +NP T
Sbjct: 59 LDVHLMVENASFFAELFAPLKPQIISIHAENEKHPHRVLQLIKNLGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I L QAG D++V GS F K + L ++++S
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQS 215
>gi|297837059|ref|XP_002886411.1| hypothetical protein ARALYDRAFT_893115 [Arabidopsis lyrata subsp.
lyrata]
gi|297332252|gb|EFH62670.1| hypothetical protein ARALYDRAFT_893115 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 125/203 (61%), Gaps = 8/203 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR ++++
Sbjct: 5 SPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNA 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINPETP 122
DCHLM+++ +++ +A AG TFH E + + L I + G + GVA+ P TP
Sbjct: 65 YLDCHLMVTNPMDYVDQMAKAGASGFTFHVEVAKENWQELVEKIKSAGMRPGVALKPGTP 124
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGV 178
V + +++ ++M+L+MTV PGFGGQ+ + + + K+R AL K ++ +EVDGG+
Sbjct: 125 VEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPNMMDKVR---ALRNKYPTLDIEVDGGL 181
Query: 179 TSRNIKSLVQAGADLLVVGSSFF 201
I + AGA+ +V GSS F
Sbjct: 182 GPSTIDAAAAAGANCIVAGSSVF 204
>gi|297837045|ref|XP_002886404.1| hypothetical protein ARALYDRAFT_475014 [Arabidopsis lyrata subsp.
lyrata]
gi|297332245|gb|EFH62663.1| hypothetical protein ARALYDRAFT_475014 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 125/203 (61%), Gaps = 8/203 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR ++++
Sbjct: 5 SPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNA 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINPETP 122
DCHLM+++ +++ +A AG TFH E + + L I + G + GVA+ P TP
Sbjct: 65 YLDCHLMVTNPMDYVDQMAKAGASGFTFHVEVAKENWQELVEKIKSAGMRPGVALKPGTP 124
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGV 178
V + +++ ++M+L+MTV PGFGGQ+ + + + K+R AL K ++ +EVDGG+
Sbjct: 125 VEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPNMMDKVR---ALRNKYPTLDIEVDGGL 181
Query: 179 TSRNIKSLVQAGADLLVVGSSFF 201
I + AGA+ +V GSS F
Sbjct: 182 GPSTIDAAAAAGANCIVAGSSVF 204
>gi|238790180|ref|ZP_04633956.1| Pentose-5-phosphate-3-epimerase [Yersinia frederiksenii ATCC 33641]
gi|238721718|gb|EEQ13382.1| Pentose-5-phosphate-3-epimerase [Yersinia frederiksenii ATCC 33641]
Length = 219
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 136/208 (65%), Gaps = 4/208 (1%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
DF+RL EE+ N+ AGA H DVMDG FVPN + G + I+++ + +D HLM+++
Sbjct: 2 DFARLSEELINLENAGAAMFHIDVMDGHFVPNFALGPEDIKAISKLATIPYDVHLMVTNP 61
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
D +I+ AD GC II H E+ H+ R+L I + G K GVAINP TP+++L++V+D +D
Sbjct: 62 DPYIDRFADLGCSIIYVHAEAPVHLHRTLSNIRSRGIKAGVAINPGTPLSVLDEVLDVVD 121
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGAD 192
++++M+VNPGF GQ I S++ KIR+ KA++ + + +DG ++ +K+L A D
Sbjct: 122 VVMVMSVNPGFAGQPFITSSVSKIRRLKAMLQQHQSKAQIAIDGAISPEIVKTL-GADVD 180
Query: 193 LLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ ++G++ +K ++SY + ++ L + A
Sbjct: 181 MFILGTAGLFRK-DMSYKQAIDVLNEQA 207
>gi|23465331|ref|NP_695934.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum NCC2705]
gi|322689182|ref|YP_004208916.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis 157F]
gi|322691056|ref|YP_004220626.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|23325971|gb|AAN24570.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum NCC2705]
gi|320455912|dbj|BAJ66534.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320460518|dbj|BAJ71138.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis 157F]
Length = 222
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMSKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++D++ A A
Sbjct: 181 TAHIVAEAGADVLVAGSAVY---GAENPAQAIDDIRTKAEA 218
>gi|282855984|ref|ZP_06265275.1| ribulose-phosphate 3-epimerase [Pyramidobacter piscolens W5455]
gi|282586203|gb|EFB91480.1| ribulose-phosphate 3-epimerase [Pyramidobacter piscolens W5455]
Length = 227
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 122/203 (60%), Gaps = 12/203 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVF 65
I PSIL+AD +G I + K +H DVMDG FVPN+S+G ++++LR Y D+V
Sbjct: 12 IAPSILSADPLAVGASIDAL-KNDFDWLHVDVMDGHFVPNLSYGPAIVKALRRRYPDAVI 70
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + +++ ++ D + H E+ H+ R+L I A G + GVA+NP TPV +
Sbjct: 71 DVHLMVEPGEDFLDMFLESRPDYLVVHQEACRHLHRALSKIAAAGVRPGVALNPATPVEL 130
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPK------IRQAKALIGKRSISLEVDGGVT 179
++ V++ D++L+M+VNPGFGGQ I K +R+A+ L +E+DGG+
Sbjct: 131 IKPVLNIADVVLLMSVNPGFGGQSFIPEVTEKAIALCQLREARGL----EFLIEMDGGIG 186
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ N+ + + G D+ V+GS+ F
Sbjct: 187 AANVAQVRRCGVDVAVMGSAVFG 209
>gi|261838820|gb|ACX98586.1| d-ribulose-5-phosphate 3 epimerase [Helicobacter pylori 51]
Length = 217
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 118/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|172040660|ref|YP_001800374.1| ribulose-phosphate 3-epimerase [Corynebacterium urealyticum DSM
7109]
gi|171851964|emb|CAQ04940.1| ribulose-phosphate 3-epimerase [Corynebacterium urealyticum DSM
7109]
Length = 228
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 115/203 (56%), Gaps = 9/203 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFS LG E+ I+ A + +H DVMDG FVPN+SFGA V +SL ++ D
Sbjct: 11 IAPSILAADFSALGAEVGAISDA--EWVHIDVMDGHFVPNLSFGAPVAKSLIGKTEQFLD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM---GKKTGVAINPETPV 123
HLMI + D D +TFH E++ + S+ A+ G K GV++ P TPV
Sbjct: 69 VHLMIEDPQRWVKEYTD--FDNVTFHVEAAGGVEESVALARALRAAGTKAGVSVKPNTPV 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L + + E D++L+M+V PGFGGQ+ + + K+R + I + +E+DGG+
Sbjct: 127 EPLLEHLAEFDLVLVMSVEPGFGGQKFMPEVLDKVRALRERIDAEGLETLIEIDGGIGPE 186
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
AG D+ V GSS F ++
Sbjct: 187 TAVQAAAAGVDVYVAGSSVFGKE 209
>gi|117928483|ref|YP_873034.1| ribulose-5-phosphate 3-epimerase [Acidothermus cellulolyticus 11B]
gi|117648946|gb|ABK53048.1| ribulose-5-phosphate 3-epimerase [Acidothermus cellulolyticus 11B]
Length = 229
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 126/201 (62%), Gaps = 3/201 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+QI PS+L+ADF+RL +E + + + A +H DVMD FVPN++ G V+ +L +
Sbjct: 2 GVQIAPSLLSADFARLADEAAAVAEV-ADWLHVDVMDNHFVPNLTVGRPVVEALHKATTL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D A+AG +TFH E++ + ++ R I A G + G+A+ P TPV
Sbjct: 61 PLDCHLMIENPDRWAVGYAEAGAANVTFHAEAAADVVQTARAIRAAGARAGLAVKPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
DV+ E DM+L+MTV PGFGGQQ + +PK+ +A+ + ++L +VDGGV+
Sbjct: 121 DGYFDVLSEFDMLLVMTVEPGFGGQQFLPEMLPKVAKARRFLRDSGLNLWIQVDGGVSLE 180
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
I++ V+AGAD+ V G++ +
Sbjct: 181 TIEACVEAGADVFVAGTAVYG 201
>gi|297621101|ref|YP_003709238.1| ribulose-phosphate 3-epimerase [Waddlia chondrophila WSU 86-1044]
gi|297376402|gb|ADI38232.1| ribulose-phosphate 3-epimerase [Waddlia chondrophila WSU 86-1044]
Length = 234
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 115/213 (53%), Gaps = 15/213 (7%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSILA DF L EE I AGA +H D+MDG FV N++ G + ++ +D
Sbjct: 5 QIKISPSILAGDFGNLAEEAKRIEDAGADMLHVDIMDGNFVDNLTLGPKALAAINRSTDL 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H+M+ ++ + +AG D++TFH E++ + +L I K G+A PET
Sbjct: 65 FLDVHIMVYHPFDYVEKMVEAGADMLTFHFEATEDVEDTLNFIRRCNIKAGLAFCPETSK 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI------------- 170
++ +D+ DMIL+MTVNPGFGGQ + + K+R + + +I
Sbjct: 125 EMVIKYLDKCDMILLMTVNPGFGGQAFMPEVLDKVRFVREACDRLNIRQGGVVPKEGTLP 184
Query: 171 --SLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+EVDGG+ + ++AGA++LV GS +
Sbjct: 185 PFDIEVDGGINDQTAGQCIEAGANVLVSGSYLY 217
>gi|15221735|ref|NP_176518.1| ribulose-phosphate 3-epimerase, cytosolic, putative /
pentose-5-phosphate 3-epimerase, putative [Arabidopsis
thaliana]
gi|12324354|gb|AAG52146.1|AC022355_7 putative D-ribulose-5-phosphate; 35237-36732 [Arabidopsis thaliana]
gi|20856482|gb|AAM26668.1| At1g63290/F9N12_9 [Arabidopsis thaliana]
gi|21593298|gb|AAM65247.1| putative D-ribulose-5-phosphate [Arabidopsis thaliana]
gi|23505807|gb|AAN28763.1| At1g63290/F9N12_9 [Arabidopsis thaliana]
gi|332195961|gb|AEE34082.1| putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
Length = 227
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 126/203 (62%), Gaps = 8/203 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FV N++ GA VI SLR ++++
Sbjct: 5 SPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNA 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ +++ +A AG TFH E + + + ++ I A G + GVA+ P TP
Sbjct: 65 YLDCHLMVTNPMDYVDQMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKPGTP 124
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGV 178
V + +++ ++M+L+MTV PGFGGQ+ + S + K+R AL K ++ +EVDGG+
Sbjct: 125 VEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMMDKVR---ALRNKYPTLDIEVDGGL 181
Query: 179 TSRNIKSLVQAGADLLVVGSSFF 201
I + AGA+ +V GSS F
Sbjct: 182 GPSTIDAAAAAGANCIVAGSSVF 204
>gi|213692248|ref|YP_002322834.1| Ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523709|gb|ACJ52456.1| Ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458374|dbj|BAJ68995.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 222
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 126/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G A+ ++D++ A A
Sbjct: 181 TAHIVAEAGADVLVAGSAVY---GAEDPAQAIDDIRAKAEA 218
>gi|108563907|ref|YP_628223.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPAG1]
gi|107837680|gb|ABF85549.1| D-ribulose-5-phosphate 3 epimerase [Helicobacter pylori HPAG1]
Length = 217
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLKPQIISIHAENEKHPHRVLQLIKHSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|227549212|ref|ZP_03979261.1| ribulose-phosphate 3-epimerase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078666|gb|EEI16629.1| ribulose-phosphate 3-epimerase [Corynebacterium lipophiloflavum DSM
44291]
Length = 218
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 121/218 (55%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSILAAD++ LGE++ ++ A IH D+MDG FVPN+SFG DV +++ +D
Sbjct: 2 IYIAPSILAADYAALGEDVRKVSNA--DLIHVDIMDGHFVPNLSFGPDVTKAVNGVTDKF 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + DAG D + FH E++ + + H +G + G AI P TP+
Sbjct: 60 LDMHLMIEQPEKWFASYVDAGGDRLVFHVEATSDHVAAAKAAHELGAEAGFAIKPGTPIE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
D ++ ++ ++IM+V PGFGGQ+ + + K+R ++ I + +S + +DGG+ +
Sbjct: 120 PYLDDLEHVEEVMIMSVEPGFGGQKFMPEVLDKVRLLRSRIAEDGLSTIIAIDGGIAAAT 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I AG + V GS+ F + L L ++A
Sbjct: 180 IAQAAAAGVESFVAGSAVFGADDPAAAVDELRRLARAA 217
>gi|196229999|ref|ZP_03128862.1| Ribulose-phosphate 3-epimerase [Chthoniobacter flavus Ellin428]
gi|196225596|gb|EDY20103.1| Ribulose-phosphate 3-epimerase [Chthoniobacter flavus Ellin428]
Length = 218
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI I PSILA DF RL EE+ AGA +H DVMDG FV NISFG + + +
Sbjct: 5 SIVIAPSILACDFGRLHEEVRRAEAAGADWLHLDVMDGHFVDNISFGPAFVDFVAKVATV 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ D + + + IT H E+ +R++L I MG+ G+++ P TP
Sbjct: 65 PLDVHLMVERPDHYFPRFVKSAAN-ITVHVEAQHDVRKTLAGIREMGRTCGLSLRPATPF 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ +D+ID++L+MTV PGFGGQ + + K++ A+ + + +EVDGG+ +
Sbjct: 124 EAVVPYLDQIDLLLVMTVVPGFGGQPFMPEMLTKVQDARDRRERLGMKYRIEVDGGINEK 183
Query: 182 NIKSLVQAGADLLVVGSSFF 201
+AGAD V G+S F
Sbjct: 184 TAAQTREAGADTFVAGTSVF 203
>gi|311990522|gb|ADQ26391.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus]
gi|311990524|gb|ADQ26392.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus]
gi|311990528|gb|ADQ26394.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus]
Length = 165
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
+HFDVMDG FVPNIS G ++ S+R+ + D HLMI + +IN A+ G D+I+ H
Sbjct: 7 LHFDVMDGQFVPNISIGIPILDSVRAATQLPIDVHLMIEQPEQYINTFAEHGADMISVHV 66
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
E++ HI R+L+ I GKK GV INP TPV L V++ +D +L+MTVNPGFGGQ IE+
Sbjct: 67 EATQHIHRALQMIKNAGKKAGVVINPGTPVESLLPVLEIVDYVLVMTVNPGFGGQSFIEA 126
Query: 154 TIPKIRQAKALIGKRSISL----EVDGGVTSRNIKSLVQAG 190
K++ + L ++S++L EVDGG+ + IK V G
Sbjct: 127 CAAKVKILRDL--RQSLNLNFNIEVDGGINNETIKICVDNG 165
>gi|317011687|gb|ADU85434.1| ribulose-phosphate 3-epimerase [Helicobacter pylori SouthAfrica7]
Length = 217
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 121/202 (59%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G ++ ++ S +
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVILENVTQISKAP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A I+ H E+ H R L+ I ++G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLKPAFISIHAENEKHPHRVLQLIKSLGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIQRYNPSCLLEVDGGVNDQN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDIVVSGSYIFKSK 200
>gi|74005315|ref|XP_861314.1| PREDICTED: similar to Ribulose-phosphate 3-epimerase
(Ribulose-5-phosphate-3-epimerase) (HUSSY-17) isoform 5
[Canis familiaris]
Length = 244
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 117/217 (53%), Gaps = 20/217 (9%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK------ 112
D FD H+M+S + + +A AG + TFH E++ + ++ I G K
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKFGWKTG 120
Query: 113 ----------TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ +
Sbjct: 121 SDRQGRTEAPVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLR 180
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
S+ +EVDGGV I +AGA+++V GS+
Sbjct: 181 TQF--PSLDIEVDGGVGPDTIHKCAEAGANMIVSGSA 215
>gi|238852572|ref|ZP_04642982.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 202-4]
gi|238834718|gb|EEQ26945.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 202-4]
Length = 216
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I ++G ++ H D+MDG FVPN+S+G ++++ RS+ +
Sbjct: 2 IAPSILNADNMHLSRDIKAAIESGIERFHIDIMDGHFVPNLSYGPELVKDFKRSFPFTKA 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++D+ + + +AG DI+ FH E++ L + + G+AINP TPV
Sbjct: 62 EIHLMSNNLDTTLPLFVEAGADILEFHYEATNKPDYWLDYLKDHNVRCGMAINPSTPVNK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ +++++D +L+MTV PGFGGQ+ E+ + ++ + + +I ++ L EVDGG+ +
Sbjct: 122 LKPLLNKLDQVLLMTVKPGFGGQKFEEAAVERLAELQDMIKDENLDLPIEVDGGIDRETL 181
Query: 184 KSLVQAGADLLVVGSSFF 201
K AGA + V GS F
Sbjct: 182 KLTRDAGAKIFVAGSYIF 199
>gi|134107273|ref|XP_777521.1| hypothetical protein CNBA6440 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260215|gb|EAL22874.1| hypothetical protein CNBA6440 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 224
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PS+LA+D S L E + G +H DVMDG FVPNI+ GA ++ + ++F
Sbjct: 6 ISPSVLASDLSDLSNECRRMMANGCDWLHMDVMDGHFVPNITMGAPILEHVYKNVPNIFM 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCH+M+S+ + +A AG + TFH E++ + + +H+ G+AI+PETP +
Sbjct: 66 DCHMMVSNPSQWVPEVAKAGGKLYTFHYEATEEPEKVIELVHSHNMLAGLAISPETPASA 125
Query: 126 LEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ D + + D++L+MTV PG GGQ+ + + K+++ + ++I +VDGGV S N
Sbjct: 126 ITDSLGKAADLLLVMTVRPGRGGQKFMPECLEKVKELRERFPGKNI--QVDGGVGSGNAC 183
Query: 185 SLVQAGADLLVVGSSFFNQK 204
QAG+++LV G++ F K
Sbjct: 184 QCAQAGSNVLVAGTAIFGAK 203
>gi|297544126|ref|YP_003676428.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841901|gb|ADH60417.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 215
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 120/212 (56%), Gaps = 1/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A++ L EE+ N+ +AGA H DVMDG FVPN G I+ +R + D
Sbjct: 5 LCPSMMCANYDYLKEEVINLDRAGADIFHIDVMDGIFVPNFGMGLQDIQCIRKNTKKPID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++++ + ++ G DII HPE+ H R+L I A+ K G+AINP T + +
Sbjct: 65 VHLMIINPENYVELFSELGADIIYIHPEAGGHPARTLEKIRALNKFRGIAINPGTSIETV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+++ +D +L+MTVNPGF GQ+ ++ KI++ L + VDG ++ I L
Sbjct: 125 IELLALVDYVLVMTVNPGFAGQRYLDFVNQKIKKLVLLKKDYGYKIMVDGAISPERINEL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ G D ++G+S K E Y L LKK
Sbjct: 185 SKWGVDGFILGTSSLFGKNE-DYKDILERLKK 215
>gi|150021401|ref|YP_001306755.1| ribulose-phosphate 3-epimerase [Thermosipho melanesiensis BI429]
gi|149793922|gb|ABR31370.1| Ribulose-phosphate 3-epimerase [Thermosipho melanesiensis BI429]
Length = 214
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 123/211 (58%), Gaps = 3/211 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SILAA+ L EE+ + +IH DVMDG FVPN++FG +I +++ ++
Sbjct: 2 VKLSGSILAANLLNLKEELKRVENL-IDEIHIDVMDGHFVPNLTFGFPLISAVKEVTNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+++ + HI + D IT H ES+ HI R++ I + V +NP TP+
Sbjct: 61 IDVHLMVTNPEFHIEKLLDYDIQRITVHIESTHHIHRAITKIKENNIEAFVTLNPGTPLV 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E+VI ID +L+M+VNPGF GQ+ I +I KI+ K + S+ VDGGV N
Sbjct: 121 FIEEVIPYIDGVLVMSVNPGFSGQKFIAKSIEKIKTLNNWKQKHGMNYSIAVDGGVNDSN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ AGA++L++G F +++K+L
Sbjct: 181 ADVIISAGANILIMGYGIFKNPELENFSKQL 211
>gi|254780065|ref|YP_003058172.1| ribulose-phosphate 3-epimerase [Helicobacter pylori B38]
gi|254001978|emb|CAX30237.1| D-ribulose-5-phosphate 3-epimerase [Helicobacter pylori B38]
Length = 217
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIRNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIRRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|55615453|ref|XP_516061.1| PREDICTED: ribulose-phosphate 3-epimerase isoform 10 [Pan
troglodytes]
Length = 246
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 118/219 (53%), Gaps = 22/219 (10%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----- 113
D FD H+M+S + + +A AG + TFH E++ + ++ I G K+
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQ 120
Query: 114 -------------GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 121 AEVQWHSQGPLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 180
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ S+ +EVDGGV + +AGA+++V GS+
Sbjct: 181 LRTQF--PSLDIEVDGGVGPDTVHKCAEAGANMIVSGSA 217
>gi|255547345|ref|XP_002514730.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
gi|223546334|gb|EEF47836.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
Length = 264
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 25/219 (11%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + I+ G V+ +LR +D
Sbjct: 59 IIVSPSILSANFAKLGEQVKAVXX------------------ITIGPLVVDALRPVTDLP 100
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + AG DI++ H E S H+ R++ I ++G K GV +NP TP
Sbjct: 101 LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATP 160
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ ++ V+D +D++LIM+VNPGFGGQ IES + KI + L ++ ++ +EVDGGV
Sbjct: 161 LSAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGP 220
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 221 KNAYKVIEAGANALVAGSAVFGAK---DYAEAIKGIKNS 256
>gi|323452309|gb|EGB08183.1| hypothetical protein AURANDRAFT_59005 [Aureococcus anophagefferens]
Length = 234
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 8/216 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LA D S + E + +AGA +H DVMDG FVPN+S+G V++ LR + +
Sbjct: 4 KIAPSLLACDLSDMAGEARRVVEAGADVLHIDVMDGHFVPNLSWGPPVVKCLRKATRAFL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK--TGVAINPETPV 123
D HLM+S + +ADAG D TFH E+ + I A +K GVA+ P TP+
Sbjct: 64 DVHLMVSDPRKWVLPMADAGADGFTFHVEADSDPAAVVDAIRAAPRKMVVGVALKPGTPI 123
Query: 124 AILEDVIDE----IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
A L+ + + D +L+MTV PGFGGQ + + + K+ +A ++ ++VDGG+
Sbjct: 124 AALDALWRDGEFLADFVLVMTVEPGFGGQSFMPAMMDKVTALRAQF--PTMDIQVDGGLG 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+++ AGA+ +V GS+ F + + +L D
Sbjct: 182 PATVETAAAAGANYIVAGSAVFKAREPAAVIAQLRD 217
>gi|308185321|ref|YP_003929454.1| ribulose-phosphate 3-epimerase [Helicobacter pylori SJM180]
gi|308061241|gb|ADO03137.1| ribulose-phosphate 3-epimerase [Helicobacter pylori SJM180]
Length = 217
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLKPQIISIHAENEKHPHRVLQLIKNAGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|303279797|ref|XP_003059191.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459027|gb|EEH56323.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 272
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 6/207 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSY 60
TP +I PS+LA DF+ + E + AGA +H DVMDG FVPN+SFGA VI+ L +
Sbjct: 3 TPPAKISPSLLACDFANIETEAKRVLDAGADWLHLDVMDGHFVPNLSFGAPVIKCLHKKL 62
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK-KTGVAINP 119
D+ D HLM+++ ++ + DAG + TFH E++ + K G+A+ P
Sbjct: 63 PDAFLDVHLMVTNPKDYVAPMKDAGATMFTFHVEATTDGGADVAAAARGAGMKVGIALKP 122
Query: 120 ETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+TP + + D+ +DMIL+MTV PGFGGQ+ + + K R + + + ++VDGG
Sbjct: 123 QTPPEAVYALCDKGGVDMILVMTVEPGFGGQKFQPAMMAKARTLRNKYAE--LDIQVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ ++ AGA+++V GSS + K
Sbjct: 181 LDGVTVREAAVAGANVIVAGSSVYGAK 207
>gi|58259179|ref|XP_567002.1| ribulose-phosphate 3-epimerase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223139|gb|AAW41183.1| ribulose-phosphate 3-epimerase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 224
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PS+LA+D S L E + G +H DVMDG FVPNI+ GA ++ + ++F
Sbjct: 6 ISPSVLASDLSDLSNECRRMMANGCDWLHMDVMDGHFVPNITMGAPILEHVYKNVPNIFM 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCH+M+S+ + +A AG + TFH E++ + + +H+ G+AI+PETP +
Sbjct: 66 DCHMMVSNPSQWVPEVAKAGGKLYTFHYEATEEPEKVIELVHSHNMLAGLAISPETPASA 125
Query: 126 LEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ D + + D++L+MTV PG GGQ+ + + K+++ + ++I +VDGGV S N
Sbjct: 126 ITDSLGKAADLLLVMTVRPGRGGQRFMPECLEKVKELRERFPGKNI--QVDGGVGSGNAC 183
Query: 185 SLVQAGADLLVVGSSFFNQK 204
QAG+++LV G++ F K
Sbjct: 184 QCAQAGSNVLVAGTAIFGAK 203
>gi|317483266|ref|ZP_07942261.1| ribulose-phosphate 3-epimerase [Bifidobacterium sp. 12_1_47BFAA]
gi|316915335|gb|EFV36762.1| ribulose-phosphate 3-epimerase [Bifidobacterium sp. 12_1_47BFAA]
Length = 222
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 127/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPVEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+LV GS+ + G + A+ ++D++ A A
Sbjct: 181 TAHIVAEAGADVLVAGSAVY---GAENPAQAIDDIRAKAEA 218
>gi|317010078|gb|ADU80658.1| ribulose-phosphate 3-epimerase [Helicobacter pylori India7]
Length = 217
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|208435413|ref|YP_002267079.1| D-ribulose-5-phosphate 3 epimerase [Helicobacter pylori G27]
gi|208433342|gb|ACI28213.1| D-ribulose-5-phosphate 3 epimerase [Helicobacter pylori G27]
Length = 217
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQISQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|257212236|emb|CAX82991.1| hypotherical protein [Schistosoma japonicum]
Length = 245
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SD 62
I I PSIL AD S+L N+ +GA +H D+MDG FVPNI+ G V+ SL+ +
Sbjct: 9 ILIGPSILNADLSQLAVVCDNLLNSGADYLHLDIMDGHFVPNITIGHPVVASLKKHLPCK 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D H+M+S + + + AG TFH ESS + ++ I K G+ I P+TP
Sbjct: 69 AFLDLHMMVSDPEKWVENMKAAGASQYTFHFESSKDVMHCIQKIREADMKVGLGIKPKTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V + +D +DM+LIMTV PGFGGQ+ + +PK+R + ++ +EVDGGVT +N
Sbjct: 129 VTEVLPYVDLVDMVLIMTVEPGFGGQKFMADMLPKVRYLRE--KYTNLDIEVDGGVTLKN 186
Query: 183 IKSLVQA 189
I+ V+
Sbjct: 187 IRDWVEV 193
>gi|311990526|gb|ADQ26393.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus]
Length = 165
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
+HFDVMDG FVPNIS G ++ S+R+ + D HLMI + +IN A+ G D+I+ H
Sbjct: 7 LHFDVMDGQFVPNISIGIPILDSVRAATQLPIDVHLMIEQPEQYINTFAEHGADMISVHV 66
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
E++ HI R+L+ I GKK GV INP TPV L V++ +D +L+MTVNPGFGGQ IE+
Sbjct: 67 EATQHIHRALQMIKNAGKKAGVVINPGTPVESLLPVLEIVDYVLVMTVNPGFGGQSFIEA 126
Query: 154 TIPKIRQAKALIGKRSISL----EVDGGVTSRNIKSLVQAG 190
K++ + L ++S++L EVDGG+ + IK V G
Sbjct: 127 CAAKVKILRDL--RQSLNLNFNIEVDGGIYNETIKICVDNG 165
>gi|296205469|ref|XP_002749784.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 2
[Callithrix jacchus]
Length = 246
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 118/219 (53%), Gaps = 22/219 (10%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----- 113
D FD H+M+S + + +A AG + TFH E++ + ++ I G K+
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKSCSFAQ 120
Query: 114 -------------GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 121 AKVQWPSQGPLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 180
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ S+ +EVDGGV + +AGA+++V GS+
Sbjct: 181 LRTQF--PSLDIEVDGGVGPDTVHKCAEAGANMIVSGSA 217
>gi|317178252|dbj|BAJ56041.1| ribulose-phosphate 3-epimerase [Helicobacter pylori F16]
gi|332674337|gb|AEE71154.1| ribulose-phosphate 3-epimerase [Helicobacter pylori 83]
Length = 217
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTKMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKCYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|114583055|ref|XP_001145990.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 8 [Pan
troglodytes]
Length = 225
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAG 190
+ + G
Sbjct: 179 GPDTVHKCAEIG 190
>gi|282850871|ref|ZP_06260245.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 224-1]
gi|282557823|gb|EFB63411.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 224-1]
Length = 216
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 119/198 (60%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I ++G ++ H D+MDG FVPN+S+G ++++ RS+ +
Sbjct: 2 IAPSILNADNMHLSRDIKAAIESGIERFHIDIMDGHFVPNLSYGPELVKDFKRSFPFTKA 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++D+ + + +AG DI+ FH E++ L + + G+AINP TPV
Sbjct: 62 EIHLMSNNLDTTLPLFVEAGADILEFHYEATNKPDYWLDYLKDHNVRCGMAINPSTPVNK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ ++++D +L+MTV PGFGGQ+ E+ + ++ + + +I ++ L EVDGG+ +
Sbjct: 122 LKPFLNKLDQVLLMTVKPGFGGQKFEEAAVERLAELQDMIKDENLDLPIEVDGGIDRETL 181
Query: 184 KSLVQAGADLLVVGSSFF 201
K AGA + V GS F
Sbjct: 182 KLTRDAGAKIFVAGSYIF 199
>gi|307638213|gb|ADN80663.1| Ribulose-phosphate 3-epimerase [Helicobacter pylori 908]
gi|325996806|gb|ADZ52211.1| Ribulose-phosphate 3-epimerase [Helicobacter pylori 2018]
gi|325998399|gb|ADZ50607.1| Ribulose-phosphate 3-epimerase [Helicobacter pylori 2017]
Length = 217
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 119/202 (58%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + + II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVELFSPLKPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|237748587|ref|ZP_04579067.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes OXCC13]
gi|229379949|gb|EEO30040.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes OXCC13]
Length = 222
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I S++ + L E S + K + +H D+MDG FVPN+ D I SLR Y++ FD
Sbjct: 7 ISASMMCVNPFTLNETFSTLEKENIEYLHLDIMDGIFVPNLGLSLDWINSLRRYTNIPFD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M + D+ + ++ DII+ H ES+P I R+L G K +AINP TP+ +L
Sbjct: 67 YHIMTINPDNILPLLQIQEKDIISIHYESTPQILRTLENAKKYGAKVFLAINPGTPIGVL 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E++I ID + ++ VNPGF GQ ++ K + + +R+ I EVDG +T N +
Sbjct: 127 EELIYFIDGVNLLMVNPGFAGQNMVPFGFSKAEKLHRFLDERNLDIDFEVDGNITFENAR 186
Query: 185 SLVQAGADLLVVG-SSFFNQKG 205
L Q GA++ V G SS F++ G
Sbjct: 187 KLKQYGANIFVAGTSSLFDKTG 208
>gi|255536945|ref|XP_002509539.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
gi|223549438|gb|EEF50926.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
Length = 226
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 126/218 (57%), Gaps = 9/218 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR ++ +
Sbjct: 6 KIAPSMLSSDFANLATEAERMLSCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYL 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ + AG TFH E+S L + I + G + GVA+ P T +
Sbjct: 66 DCHLMVTNPIDYVEPLGKAGASGFTFHVEASRDNWADLIQRIKSKGMRPGVALKPGTSIE 125
Query: 125 ILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +++ ++M+L+MTV PGFGGQ+ + + + K++ + S+ +EVDGG+
Sbjct: 126 EVYPLVECENPVEMVLVMTVEPGFGGQKFMPTMMEKVKTLRKKY--PSLDIEVDGGLGPS 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I AGA+ +V GSS F G A ++ +KKS
Sbjct: 184 TIDLAASAGANCIVAGSSVF---GAPEPAHVISLMKKS 218
>gi|291456819|ref|ZP_06596209.1| ribulose-phosphate 3-epimerase [Bifidobacterium breve DSM 20213]
gi|291382096|gb|EFE89614.1| ribulose-phosphate 3-epimerase [Bifidobacterium breve DSM 20213]
Length = 222
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 126/221 (57%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +D
Sbjct: 3 NIAIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVGRICEVTDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 61 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKASFAVRPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVSPK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGAD+LV GS+ + G + A+ ++D++ A A
Sbjct: 181 TAHIVAAAGADVLVAGSAVY---GAENPAQAVDDIRAKAEA 218
>gi|116629423|ref|YP_814595.1| Pentose-5-phosphate-3-epimerase [Lactobacillus gasseri ATCC 33323]
gi|311110928|ref|ZP_07712325.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri MV-22]
gi|116095005|gb|ABJ60157.1| ribulose-5-phosphate 3-epimerase [Lactobacillus gasseri ATCC 33323]
gi|311066082|gb|EFQ46422.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri MV-22]
Length = 216
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 119/198 (60%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I ++G ++ H D+MDG FVPN+S+G ++++ RS+ +
Sbjct: 2 IAPSILNADNMHLSRDIKAAIESGIERFHIDIMDGHFVPNLSYGPELVKDFKRSFPFTKA 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLM +++D+ + + +AG DI+ FH E++ L + + G+AINP TPV
Sbjct: 62 EIHLMSNNLDTTLPLFVEAGADILEFHYEATNKPDYWLDYLKDHNVRCGMAINPSTPVNK 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ ++++D +L+MTV PGFGGQ+ E+ + ++ + + +I ++ L EVDGG+ +
Sbjct: 122 LKPFLNKLDQVLLMTVKPGFGGQKFEEAAVERLAELQDMIKDENLDLPIEVDGGLDRETL 181
Query: 184 KSLVQAGADLLVVGSSFF 201
K AGA + V GS F
Sbjct: 182 KLTRDAGAKIFVAGSYIF 199
>gi|308234679|ref|ZP_07665416.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis ATCC 14018]
Length = 221
Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G +++ + +
Sbjct: 2 NIQIAPSILSADFCNLERDL--IAISNADLVHVDVMDHHFVPNLTLGEPIVKRICEVTSL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G D ++FH ++ R R + MG K+ A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGADSVSFHMGATHAPVRLARQLRDMGCKSCFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV+
Sbjct: 120 EPIFDILDEFDMILIMTVEPGFGGQKFLSNQMGKVRRLRDEITRRGLDTHIQVDGGVSPS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGAD+LV GS+ + + + + ++ + A
Sbjct: 180 TAAIVAEAGADVLVAGSAVYGAENPSAAIDSIRNIAQEAW 219
>gi|306836174|ref|ZP_07469158.1| ribulose-phosphate 3-epimerase [Corynebacterium accolens ATCC
49726]
gi|304567895|gb|EFM43476.1| ribulose-phosphate 3-epimerase [Corynebacterium accolens ATCC
49726]
Length = 231
Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 7/219 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ I PSILAADF+RLGE++ I+ A IH D+MDG FVPN+SFG D+ +++ +D
Sbjct: 11 PAPLISPSILAADFARLGEQLEAISNA--DWIHVDIMDGHFVPNLSFGPDITATVKRSTD 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINP 119
D HLMI S + AG I FH E+ ++ I +G + +I P
Sbjct: 69 KPLDVHLMIESPAKWVETYIKAGATTIIFHVEAVEGEAAAVELAENIRDLGARAAFSIKP 128
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
+TP+ D + D +L+M+V PGFGGQ+ + + + K+R + I ++++ +E+DGG
Sbjct: 129 DTPIEPWLDKLHHFDEVLVMSVEPGFGGQKFMPAMLDKVRALRESIDQQNLDTVIEIDGG 188
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ I +AG D V GS+ F + L L
Sbjct: 189 IDPDTIALAAEAGCDSFVAGSAVFKSDDPAQAVEELRAL 227
>gi|290997926|ref|XP_002681532.1| predicted protein [Naegleria gruberi]
gi|284095156|gb|EFC48788.1| predicted protein [Naegleria gruberi]
Length = 235
Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 124/209 (59%), Gaps = 16/209 (7%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L + + + GA +H DVMDG FV NI+ GA V++SLR ++ D
Sbjct: 9 ICPSILSADFATLAADSNQMLDFGADWLHVDVMDGHFVNNITIGAPVVKSLRKHTKGFLD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAM-------GK--KTGVA 116
CHLM+S I+ +AG D ITFH ES + + +L+ ++ + GK KT +
Sbjct: 69 CHLMVSHPSKWIHDFIEAGADNITFHYESENGDLESTLKVMNLIKEENEKQGKQCKTSIT 128
Query: 117 INPETPVAILEDVIDE----IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
I P+TPV +L ++D I MILIM+V PGFGGQ + + K++ + +++
Sbjct: 129 IKPKTPVDVLFPILDNHTESIYMILIMSVEPGFGGQSFMADQMEKVKILRE--KYPHLNI 186
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+VDGGVT I +AGA+++V GS+ F
Sbjct: 187 QVDGGVTETTIVPAAEAGANVVVSGSAIF 215
>gi|169349821|ref|ZP_02866759.1| hypothetical protein CLOSPI_00559 [Clostridium spiroforme DSM 1552]
gi|169293389|gb|EDS75522.1| hypothetical protein CLOSPI_00559 [Clostridium spiroforme DSM 1552]
Length = 213
Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF+ L +EI I A + IH+DVMDG FVPNISFG +++ + +D
Sbjct: 2 VKIAPSLLSADFACLKKEIDKIKVA--EWIHYDVMDGHFVPNISFGYSILKDVSKVTDKY 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMIS +++ + +I FH E+ I + ++ I G+AI P+T
Sbjct: 60 LDVHLMISDPFKYVDNFIASNASLIVFHYEAVEENEINKLIKHIKNNNIDVGIAIKPDTC 119
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+L+ + ++D++L+M+V PGFGGQ S I KI + L + + +EVDGG+
Sbjct: 120 QDVLKPFLSQLDLVLVMSVEPGFGGQTFNHSAIEKISKLAKLREENNYHYLIEVDGGINE 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K QAG D+LV GS FN Y K + LK
Sbjct: 180 STAKLCRQAGVDVLVAGSYVFNSD---DYTKAIESLK 213
>gi|311114697|ref|YP_003985918.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis ATCC 14019]
gi|310946191|gb|ADP38895.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis ATCC 14019]
Length = 224
Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G +++ + +
Sbjct: 5 NIQIAPSILSADFCNLERDL--IAISNADLVHVDVMDHHFVPNLTLGEPIVKRICEVTSL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G D ++FH ++ R R + MG K+ A+ P PV
Sbjct: 63 PVDVHLMIEDPDRWAPEYAKLGADSVSFHMGATHAPVRLARQLRDMGCKSCFAVRPAEPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV+
Sbjct: 123 EPIFDILDEFDMILIMTVEPGFGGQKFLSNQMGKVRRLRDEITRRGLDTHIQVDGGVSPS 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGAD+LV GS+ + + + + ++ + A
Sbjct: 183 TAAIVAEAGADVLVAGSAVYGAENPSAAIDSIRNIAQEAW 222
>gi|160932060|ref|ZP_02079451.1| hypothetical protein CLOLEP_00894 [Clostridium leptum DSM 753]
gi|156868662|gb|EDO62034.1| hypothetical protein CLOLEP_00894 [Clostridium leptum DSM 753]
Length = 248
Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 1/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ ADF L E+ + KAG H DVMDG FVPN G I+ + D
Sbjct: 37 LCPSMMCADFGALKREMEALEKAGIDLYHLDVMDGKFVPNFGMGLQDIQYICGQGKKPAD 96
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++ + A G II HPE+ H R+L+ I G K G+AINP T + +
Sbjct: 97 VHLMIEDPGNYVELFAGLGAKIIYIHPEADTHPTRTLQRIIDAGAKPGIAINPGTSIGTV 156
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E+++ + +L+MTVNPGF GQ+ ++ T KI + A K + VDG ++ I SL
Sbjct: 157 EELLYLSEYVLVMTVNPGFAGQKYLDFTDYKIEKLSAFKEKYGFEMVVDGAISPERIASL 216
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ G V+G+S KG SY + + +L+
Sbjct: 217 SRKGVKGFVLGTSSLFGKGR-SYEEIIPELR 246
>gi|328955165|ref|YP_004372498.1| ribulose-5-phosphate 3-epimerase [Coriobacterium glomerans PW2]
gi|328455489|gb|AEB06683.1| ribulose-5-phosphate 3-epimerase [Coriobacterium glomerans PW2]
Length = 229
Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 125/210 (59%), Gaps = 9/210 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ + PSI+ A+ L ++I + + G IH D++DG F P++ G + I+S+R
Sbjct: 1 MNDTVILSPSIMCANLVNLEQDIHELKRIGFNTIHIDLIDGIFSPSMPLGIETIKSMRKI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+VFD H+M + I + + G ITFH E+S H R + I G + G+A+NP
Sbjct: 61 TDAVFDVHIMAHDNEFFIRQMLEIGAQKITFHLETSLHADRYIHLIKNAGAQVGIALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP----KIRQAKALIGKRSI--SLEV 174
TP+++LE ++ E+D + +M +NPGF Q E +P KIR +I ++ + S++V
Sbjct: 121 TPLSMLEYILKEVDRVCLMLINPGF-AQDKNEHQVPYAFEKIRDLARMIHEKHLKTSIQV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSS--FFN 202
DG V+ I L++AGAD LV+GS+ FF+
Sbjct: 180 DGRVSLEKIPGLIEAGADDLVLGSTSLFFH 209
>gi|315604187|ref|ZP_07879253.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313893|gb|EFU61944.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 220
Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E++ I AGA H DVMD FVPN+S+G V ++ D
Sbjct: 5 ISPSILNCDIADLRGELNKI--AGADVAHVDVMDNHFVPNLSWGLPVAEAVVKSGILPVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+ GC +TFH E++ R R +H +G + G+A+ P T +A
Sbjct: 63 AHLMIEDPDRWAPGYAEVGCHSVTFHAEAAAAPLRLARELHRLGARAGLALKPATDIAPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
D+++E DMILIMTV PGFGGQ IE IPKI + + I +S++VDGG++ I+
Sbjct: 123 VDILNEFDMILIMTVEPGFGGQSFIEQMIPKIERTRRAINAAGLEVSIQVDGGISRTTIE 182
Query: 185 SLVQAGADLLVVGSSFF 201
AGAD V GS+ F
Sbjct: 183 RAAAAGADNFVAGSAVF 199
>gi|119590878|gb|EAW70472.1| ribulose-5-phosphate-3-epimerase, isoform CRA_a [Homo sapiens]
Length = 191
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQ 188
+ +
Sbjct: 179 GPDTVHKCAE 188
>gi|313634777|gb|EFS01213.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
Length = 222
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + KA K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEKAKVKMLHCDVMDGVFVANTAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + ++ I ++G K +AI+PET + +
Sbjct: 64 VHLATVNPDEFVDLYAAIKPAYMSFHVENSPDVAATISHIRSLGIKPSIAISPETAIEKI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+DE+DM+L+MTVNPGF GQ+ + KI+Q K + + +EVDG + ++
Sbjct: 124 YPFLDEVDMVLMMTVNPGFAGQKFQRHVLEKIQQLKKELENHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L G D+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGVDIYVVGTAALFNDKTG-SYTEKLAPLRE 217
>gi|332212720|ref|XP_003255467.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Nomascus
leucogenys]
Length = 228
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG F PNI+FG V+ SLR
Sbjct: 1 MVSGCKIGPSILNSDLANLGAEYLQMLDSGADYLHLDVMDGHFDPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + + AG + TFH E++ ++ ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMVIAGANQYTFHLEATENLGTLIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFG Q+ +E + K+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGRQKFMEDMMRKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ +AG +++V GS+
Sbjct: 179 GPDTVHKCAEAGVNMIVSGSA 199
>gi|255018688|ref|ZP_05290814.1| hypothetical protein LmonF_14966 [Listeria monocytogenes FSL
F2-515]
Length = 163
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 9 FDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPS 68
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV K
Sbjct: 69 TLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAK 128
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F +G+I L L K L
Sbjct: 129 ECTLAGADLIVVGSYLF--EGDIE--ANLEKLAKGVLT 162
>gi|254387966|ref|ZP_05003203.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|294817512|ref|ZP_06776154.1| Ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|326446161|ref|ZP_08220895.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|197701690|gb|EDY47502.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|294322327|gb|EFG04462.1| Ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
Length = 217
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 122/206 (59%), Gaps = 5/206 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+P++L AD LGE I + A +H DVMDG FVP IS+G I ++R +
Sbjct: 3 QILPALLGADPLALGEAIDALADTRADLLHLDVMDGAFVPEISYGTRTIAAVRRRTTLQL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +++++ + +A D++T H E++PHI R LRT+ G + GVA+NP TP+A
Sbjct: 63 DVHLQVERPETYLDALIEARTDLVTVHVETTPHISRLLRTVTQAGLQAGVALNPGTPLAQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRN 182
+E+V++++ + +MT +PG + + KIR+ + L+ R +++ DGGVT
Sbjct: 123 VEEVLEQVVQVTVMTSSPGT--SDFMPHVLDKIRRLRTLLDSRGLNHLAIAADGGVTVAR 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
+L AGAD L+ GS+ F G ++
Sbjct: 181 AGALRAAGADRLIAGSAVFQATGGVA 206
>gi|20806711|ref|NP_621882.1| Pentose-5-phosphate-3-epimerase [Thermoanaerobacter tengcongensis
MB4]
gi|20515166|gb|AAM23486.1| Pentose-5-phosphate-3-epimerase [Thermoanaerobacter tengcongensis
MB4]
Length = 214
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 117/199 (58%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILAAD + LG+E+ + K G IH DV+DG + N F ++ LR +D
Sbjct: 1 MKISASILAADTAFLGKEVLELEKLGIDFIHVDVIDGHYANNFGFSPKTVKDLRRITDLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HL I + ++++ I ++AG DII ++ H R LR I A+GKK GVA++P
Sbjct: 61 IEVHLEILNPENYVEIFSEAGADIIIVQFDTCSHPLRILRKIKALGKKAGVALSPCVSFE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
L ++++D +L M+V PGFGGQ TI KI+ AK + + SI + VDGGV N
Sbjct: 121 SLRWCLNDVDYLLFMSVEPGFGGQNFETFTIDKIKLAKVQLKEMGFSIPIGVDGGVNLGN 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I L + G D++VVGS+ F
Sbjct: 181 INLLREVGVDIVVVGSALF 199
>gi|168334498|ref|ZP_02692664.1| allulose-6-phosphate 3-epimerase [Epulopiscium sp. 'N.t. morphotype
B']
Length = 221
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 113/195 (57%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I S++ AD L I + K + H D+MDG FVPN+S D + +++ +
Sbjct: 1 MKISASLMCADLLNLEASIRQLEKTDIEMYHIDIMDGHFVPNLSLNFDTLAAIQKIATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+++ +I+ +A D I FH E+ + R L I A+G K G+A+NP+T
Sbjct: 61 LDVHLMVTNPQDYISKLAALNVDYIVFHLETCNNPIRLLNEIRALGIKGGIALNPKTDPL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ ++D +D+I+IMTV PGF GQ+ I S + KI K + R I +EVDG +T N +
Sbjct: 121 ALQYLLDYVDLIVIMTVEPGFAGQKFIPSQLSKISAIKNMCQNRDILIEVDGNITLENAR 180
Query: 185 SLVQAGADLLVVGSS 199
+ GAD+ V+G+S
Sbjct: 181 NCYNLGADIGVLGTS 195
>gi|270001129|gb|EEZ97576.1| hypothetical protein TcasGA2_TC011438 [Tribolium castaneum]
Length = 230
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 121/217 (55%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL AD S+L E + GA +H DVMDG FVPN+S G V++ LR+ +
Sbjct: 11 KIGPSILNADLSQLYVESQRLLDNGADYLHLDVMDGHFVPNLSIGHPVVKCLRNKIRTAF 70
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F+ H+M+S + +A+AG + TFH E + R + G + G+A+ P T +
Sbjct: 71 FETHMMVSEPGKWVEPMAEAGVNQYTFHIEPVKDVIPLCRKVREAGMQVGLALKPGTGIE 130
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ID DMILIMTV PGFGGQ+ + +PK++ + + +EVDGGV I
Sbjct: 131 AVRQYIDHADMILIMTVEPGFGGQKFMGEMMPKVQWLRH--NYPGLDIEVDGGVGLNTIT 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGA+++V G++ N + + L + +S++
Sbjct: 189 ACAEAGANMIVSGTAIINANDQKAVIASLRETVESSI 225
>gi|313639403|gb|EFS04275.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL S4-171]
Length = 222
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + KA K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEKAKVKMLHCDVMDGVFVANTAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + ++ I ++G K +AI+PET + +
Sbjct: 64 VHLATVNPDEFVDLYAAIKPAYMSFHVENSPDVAATISHIRSLGIKPSIAISPETAIEKI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+DE+DM+L+MTVNPGF GQ+ + KI+Q K + + EVDG + ++
Sbjct: 124 YPFLDEVDMVLMMTVNPGFAGQKFQRHVLEKIQQLKKELENHTNXXXXEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L G D+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGVDIYVVGTAALFNDKTG-SYTEKLAPLRE 217
>gi|255716382|ref|XP_002554472.1| KLTH0F06116p [Lachancea thermotolerans]
gi|238935855|emb|CAR24035.1| KLTH0F06116p [Lachancea thermotolerans]
Length = 236
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 13/207 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-------- 58
+ PSILA+DF+ L + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 6 VAPSILASDFANLECSCHKVINAGADWLHIDVMDGHFVPNITLGQPIVASLRKAVPRVQD 65
Query: 59 ---SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+ + FDCH+M+ S + + A G D TFH E++ ++ I + +
Sbjct: 66 TTATKPKAFFDCHMMVESPEKWVADFAKCGADQFTFHYEATKDPLALVKLIKSHNIRAAC 125
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
AI P TPV +L ++ +DM L+MTV PGFGGQ+ + +PK+ +A ++ ++VD
Sbjct: 126 AIKPGTPVDVLYELGPHLDMALVMTVEPGFGGQKFMIEMMPKVEALRAKF--PNMDIQVD 183
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFN 202
GG+ I +AGA+++V G+S F
Sbjct: 184 GGLGKDTIPHAAKAGANVIVAGTSVFT 210
>gi|109948242|ref|YP_665470.1| ribulose-phosphate 3-epimerase [Helicobacter acinonychis str.
Sheeba]
gi|109715463|emb|CAK00471.1| ribulose-phosphate 3-epimerase [Helicobacter acinonychis str.
Sheeba]
Length = 217
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 121/202 (59%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +E+ +++ A +H DVMDG +VPN++ G ++ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKELESVSSADF--LHVDVMDGHYVPNLTMGPVILENVTRMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A +II+ H E+ H R L+ I ++G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLKPEIISIHAENEKHPHRVLQLIKSLGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDQN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QA D++V GS F K
Sbjct: 179 IFELQQADVDIVVSGSYIFKSK 200
>gi|295095448|emb|CBK84538.1| D-allulose 6-phosphate 3-epimerase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 231
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFIDQH-ADYFHIDIMDGHFVPNLTLSPFFVGQVKKLATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I+ +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYISQLAQAGADFITLHPETINGQAFRLIEEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + KI + KA + +S +E+DG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLEKIAELKAWREREGLSYEIEIDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
K L+ AGAD+ +VG+S FN I A +L
Sbjct: 180 TYKKLMAAGADVFIVGTSGLFNHAENIGDAWQL 212
>gi|295693448|ref|YP_003602058.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus ST1]
gi|295031554|emb|CBL51033.1| Ribulose-phosphate 3-epimerase [Lactobacillus crispatus ST1]
Length = 225
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I KAG + H D+MDG FVPN+SFG ++++ +++ D+
Sbjct: 3 IAPSILNADNLNLEEKIDEAKKAGISRFHIDIMDGHFVPNLSFGPELVKDFKKNFRDTFA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM + ++ I AG D+I H E S + L +H K GV +NP+TP
Sbjct: 63 EVHLMSDNPNTFIPAFTKAGADLIEIHYEAMSEDSLIHWLDYMHEHQIKAGVVLNPDTPA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
++L+ ++D +L+MTV PGFGGQ+ I+ + KI + ++++ +EVDGG+ +R
Sbjct: 123 SVLKKFATKVDQVLVMTVYPGFGGQKFIDES-KKITEIQSILNGVNSKAPIEVDGGINNR 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I +AGA + VVGS F + KRL
Sbjct: 182 TIDIAKKAGASVFVVGSYIFGKSNVPLTIKRL 213
>gi|289192967|ref|YP_003458908.1| ribulose-phosphate 3-epimerase [Methanocaldococcus sp. FS406-22]
gi|288939417|gb|ADC70172.1| ribulose-phosphate 3-epimerase [Methanocaldococcus sp. FS406-22]
Length = 221
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 124/219 (56%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I SIL+ADF L EEI +AG H D+MDG FVPNIS G + + ++ +
Sbjct: 2 IKIGASILSADFGHLKEEIRKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKYVKEITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++D IN + D ITFH E+ R++ I ++G + VA+NP TP+
Sbjct: 62 VDVHLMVENVDLFINEFEN--MDYITFHIEAVKFPFRTINRIKSIGAEPIVALNPATPLD 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+E ++ E+ +LIMTV PGF GQ+ I KI + K +I + + VDGG+
Sbjct: 120 RIEYILGEVHAVLIMTVEPGFSGQKFIPIMTKKIEKLKNMIVENGYDTKIFVDGGINVET 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
V+AGAD+L+ S+ F KG++ A + LK SAL
Sbjct: 180 APLAVKAGADVLIAASAIFG-KGDVKTA--VEKLKNSAL 215
>gi|227485548|ref|ZP_03915864.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
gi|227236414|gb|EEI86429.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
Length = 216
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 120/214 (56%), Gaps = 1/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PS++ A+F L +E+ ++ KAGA H D+MDG FVPN G I ++R ++
Sbjct: 3 NIKICPSLMCANFDNLKKEVVSLDKAGADIFHIDIMDGNFVPNFGMGLQDIDTVRRNTNK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM + HI + AG DI+ H E I +L I G K G+A++P T +
Sbjct: 63 EIDVHLMSINASDHIGLFKKAGVDIVYVHSEGDSLISTTLAKIKENGMKVGLAVSPGTSI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++++++ +D++L+MTVNPGF GQ+ ++ KI + L K + + VDG ++ +
Sbjct: 123 YSIKELLNLVDIVLVMTVNPGFAGQKYLDYVDEKIFKLADLKSKYNFEIFVDGAISEEKV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L G D ++G+S K E SY + + LK
Sbjct: 183 NYLKTKGVDGFILGTSALFGKDE-SYEEIIKRLK 215
>gi|45358677|ref|NP_988234.1| Pentose-5-phosphate 3-epimerase [Methanococcus maripaludis S2]
gi|45047543|emb|CAF30670.1| Pentose-5-phosphate 3-epimerase [Methanococcus maripaludis S2]
Length = 219
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + EE+ + H D+MDG FVPN+S G V L+S +D
Sbjct: 2 VMIGASILSADYGHMAEEVKKAEEGNVDFFHVDIMDGHFVPNLSMGLRVPHYLKSITDVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I +ADA D+I FH ESS ++ R++ I K VA+NP TP+
Sbjct: 62 IDVHLMVENPDLFIPKLADA-ADMIAFHAESSKYLFRTVDMIKEHDAKPIVALNPSTPIG 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR--QAKALIGKRSISLEVDGGVTSRN 182
+E V++ + +L+MTV PGF GQ I I KI + K L + VDGG+
Sbjct: 121 NVEYVLENLYGVLVMTVEPGFSGQSFINPMIKKIDNLKNKILTEGYDTKIFVDGGINLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ + G+ K +NDL+ SA
Sbjct: 181 APKAVEAGADGLIAASAIY---GKEDVKKAVNDLRNSA 215
>gi|210135713|ref|YP_002302152.1| ribulose-phosphate 3-epimerase [Helicobacter pylori P12]
gi|210133681|gb|ACJ08672.1| D-ribulose-5-phosphate-3-epimerase [Helicobacter pylori P12]
Length = 217
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENAGFFVELFAPLKPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + S LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKHYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|27262528|gb|AAN87545.1| Ribulose-phosphate 3-epimerase [Heliobacillus mobilis]
gi|111074984|gb|ABH04842.1| ribulose-phosphate 3-epimerase [Heliobacillus mobilis]
Length = 157
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 95/148 (64%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS LG +++++ GA+ +H DVMDG FVPNI+ G V+ SLR S V
Sbjct: 3 IKIAPSILSADFSNLGSQVADVEAGGAEYLHIDVMDGHFVPNITIGPLVVASLRPRSQMV 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I AG D++T H E+ H+ R++ I G K GVA+NP T
Sbjct: 63 FDTHLMIEEPDRYIPDFIKAGSDLVTVHQEACTHLHRTVSLIREKGAKAGVALNPATSWQ 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIE 152
LE V+ +D++L+M+VNP F ++ +
Sbjct: 123 SLEYVLPMVDLVLVMSVNPWFWRSKVYQ 150
>gi|268610010|ref|ZP_06143737.1| ribulose-phosphate 3-epimerase [Ruminococcus flavefaciens FD-1]
Length = 217
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 2/206 (0%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+L+AD L EI + +G +HFDVMDG FV NI++G ++ ++ +D + D HL
Sbjct: 8 SVLSADMLNLESEIRKMENSGIDMLHFDVMDGVFVNNITYGLAILEAVDKGTDMLLDVHL 67
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
MI ++ A G DIITFH ES +++ I G K ++I P TP +
Sbjct: 68 MIIDPLKYVESFAQCGADIITFHLESESDTMETIKAIKKCGVKASLSIKPGTPAEEIFPY 127
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLV 187
+ +DM+L+MTV PGFGGQ I T+ K++ + I + + +EVDGG+ + ++
Sbjct: 128 LPYLDMVLVMTVEPGFGGQSFIPETLGKVKAIRDKINELGLDADVEVDGGINAETAPLVI 187
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRL 213
AGA++LV GS F AK +
Sbjct: 188 DAGANVLVSGSYLFKAPDMAEAAKNI 213
>gi|331697234|ref|YP_004333473.1| ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326951923|gb|AEA25620.1| ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
Length = 223
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 11 ILAADFSRLGEEISNITKA---GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDC 67
+L+ADF+RL +E +T GA +H DVMD FVPN++ G V+ SL ++ DC
Sbjct: 1 MLSADFARLADEADVVTGPVGEGADWLHIDVMDAHFVPNLTLGLPVVESLLRATEVPLDC 60
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLMI D A+AG +T H E++ R + A G + G++I P TP+
Sbjct: 61 HLMIDDPDRWAPAYAEAGAYNVTVHAEAAHDPVALARNLRAAGARAGLSIKPGTPLEDHL 120
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKS 185
D + D +LIM+V PGFGGQ I + K+R A+ L+ G ++ +E+DGG+ + ++
Sbjct: 121 DTLKHYDTLLIMSVEPGFGGQAFIPEVLDKVRTARRLVDTGHLTVLVEIDGGINADTVEQ 180
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AG D V GS+ + + + L +
Sbjct: 181 AAEAGVDCFVAGSAVYGADDPLRAVRALRE 210
>gi|321250014|ref|XP_003191657.1| ribulose-phosphate 3-epimerase [Cryptococcus gattii WM276]
gi|317458124|gb|ADV19870.1| Ribulose-phosphate 3-epimerase, putative [Cryptococcus gattii
WM276]
Length = 224
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PS+LA+D S L E + G +H DVMDG FVPNI+ GA ++ + ++F
Sbjct: 6 ISPSVLASDLSDLSNECRRMMANGCDWLHMDVMDGHFVPNITMGAPILEHVYKNVPNIFM 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCH+M+S+ + ++ AG + TFH E++ + + +H+ G+AI+PETP +
Sbjct: 66 DCHMMVSNPAQWVPEVSKAGGKLYTFHYEATEEPEKVIELVHSHKMLAGLAISPETPASA 125
Query: 126 LEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ D + + D++L+MTV PG GGQ+ + + K+++ + ++I +VDGGV S N
Sbjct: 126 VTDSLGKAADLLLVMTVRPGRGGQKFMPECLEKVKELRERFPGKNI--QVDGGVGSGNAC 183
Query: 185 SLVQAGADLLVVGSSFFNQK 204
QAG+++LV G++ F K
Sbjct: 184 QCAQAGSNVLVAGTAIFGAK 203
>gi|296490367|gb|DAA32480.1| ribulose-5-phosphate-3-epimerase [Bos taurus]
Length = 187
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLASLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATDNPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNI 183
I
Sbjct: 179 GPDTI 183
>gi|58337590|ref|YP_194175.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus NCFM]
gi|227904230|ref|ZP_04022035.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus ATCC
4796]
gi|58254907|gb|AAV43144.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus NCFM]
gi|227867878|gb|EEJ75299.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus ATCC
4796]
Length = 216
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L +I AG + H D+MDG FVPN+SFG ++ R + +
Sbjct: 3 IAPSILNADNLNLETDIKEAIAAGINRFHIDIMDGHFVPNLSFGPQLVEDFKREFPMTDA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM S D + +AG D+I H E+ + L + + G TG+A+NP+TP
Sbjct: 63 EIHLMSDSPDDLVPAFVNAGADLIELHYEAMDEDKLDYWLDYLISNGVNTGLALNPDTPS 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ + +++ +L+MTV PGFGGQ+ I ++ KI++ + L+G I +EVDGG+ ++ I
Sbjct: 123 DVVTKYVSKLNQVLVMTVYPGFGGQEFIANSAQKIKEVRELVGP-DIDIEVDGGINNQTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K AGA++ VVGS + + +L D+ K
Sbjct: 182 KIAKDAGANVFVVGSYLYKAGNIANQVHKLEDILK 216
>gi|328851909|gb|EGG01059.1| hypothetical protein MELLADRAFT_39349 [Melampsora larici-populina
98AG31]
Length = 232
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 129/221 (58%), Gaps = 8/221 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PS+LA+DF L E + K GA+ +H D+MDG FVPNI+ GA V+ + +S +
Sbjct: 6 IAPSVLASDFGNLTAECKRVIKDGAEWLHMDIMDGHFVPNITIGAPVLACVAKSVQGAYM 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS----LRTIHAMGKKTGVAINPET 121
DCH+M++ I ++ AG TFH E+ + ++ IH G K G+AI+P+T
Sbjct: 66 DCHMMVADPLKWIPDVSKAGGSSYTFHIEACTSSHQDPIEIIQKIHETGMKAGIAISPDT 125
Query: 122 PVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
P ++ + I + +D++L+MTV+PG GGQ +E + K+++ + ++ I +VDGGV
Sbjct: 126 PSNLITNEIGKLVDLLLVMTVHPGRGGQAFMEECVIKVKELRERFPEKDI--QVDGGVGP 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +K +AG++++V G++ F K + ++ ++ L
Sbjct: 184 KTVKPCAEAGSNVIVAGTAVFGSPQPGVVIKEMKEIVETEL 224
>gi|213421519|ref|ZP_03354585.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 181
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
Query: 46 NISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR 104
N++ G V++SLR Y + D HLM+ +D + A AG IITFHPE+S H+ R+L+
Sbjct: 1 NLTIGPMVLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQ 60
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
I G K G+ NP T ++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ +
Sbjct: 61 LIKEHGCKAGLVFNPATSLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRR 120
Query: 165 I--GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I I LEVDGGV NI + AGAD+ V GS+ F++ Y K +++++
Sbjct: 121 IDASGYDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDKP---DYKKVIDEMR 172
>gi|222152471|ref|YP_002561646.1| ribulose-phosphate 3-epimerase [Streptococcus uberis 0140J]
gi|222113282|emb|CAR40822.1| putative ribulose-phosphate 3-epimerase [Streptococcus uberis
0140J]
Length = 229
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 5/202 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSI+ AD L +I + ++G +H D++DG F P + G D ++ +R+ +D FD H
Sbjct: 8 PSIMCADLVNLERDIKVLEESGLDTLHIDLIDGNFSPAMPLGIDTVKRMRAITDMNFDIH 67
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
+M + + I+ + G +TFH E+S HI R ++ IH G K G+A+NP T + LE
Sbjct: 68 IMATENEFFISEMLKIGVQSVTFHYETSRHISRYIQMIHEAGAKVGIALNPATSLTELEY 127
Query: 129 VIDEIDMILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ E+DM+ +M +NPGF + + KI K LI IS++VDG V+ +I
Sbjct: 128 ILPEVDMVTLMLINPGFATNKNETQVSYAAKKISDLKKLIDNNGYKISIQVDGRVSLDSI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKG 205
SLV+AGAD LV+GS+ KG
Sbjct: 188 PSLVKAGADNLVLGSTSLFIKG 209
>gi|224456982|ref|ZP_03665455.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 185
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 108/182 (59%), Gaps = 6/182 (3%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
MD +VPN++FG V+++LR Y + D HLM+ +D+ I A AG I FHPE+S
Sbjct: 1 MDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASE 60
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
HI RSL+ I + G + G+A+NP T + L+ V ID +LIM+VNPGFGGQ+ I + + K
Sbjct: 61 HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDK 120
Query: 158 IRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ I R I LE+DGGV NI + G + V GS+ FN SY + ++
Sbjct: 121 AKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSD---SYKQTIDK 177
Query: 216 LK 217
++
Sbjct: 178 MR 179
>gi|227503567|ref|ZP_03933616.1| ribulose-phosphate 3-epimerase [Corynebacterium accolens ATCC
49725]
gi|227075603|gb|EEI13566.1| ribulose-phosphate 3-epimerase [Corynebacterium accolens ATCC
49725]
Length = 231
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 7/219 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ I PSILAADF+RLGE++ I+ A IH D+MDG FVPN+SFG D+ +++ +D
Sbjct: 11 PAPLISPSILAADFARLGEQLEAISNA--DWIHVDIMDGHFVPNLSFGPDITATVKRSTD 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINP 119
D HLMI + AG I FH E+ ++ I +G + +I P
Sbjct: 69 KPLDVHLMIEDPAKWVETYIKAGATTIIFHVEAVEDEVAAVELAEKIRDLGARAAFSIKP 128
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
+TP+ D + D +L+M+V PGFGGQ+ + + + K+R + I ++++ +E+DGG
Sbjct: 129 DTPIEPWLDKLHHFDEVLVMSVEPGFGGQKFMPAMLDKVRALRESIDQQNLDTVIEIDGG 188
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ I +AG D V GS+ F + L L
Sbjct: 189 IDPETIGLAAEAGCDSFVAGSAVFKSDDPAQAVEELRAL 227
>gi|269122425|ref|YP_003310602.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268616303|gb|ACZ10671.1| Ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 234
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 122/218 (55%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS++ AD L I + G +H D++DG F P++ G D ++ LR ++
Sbjct: 4 IAISPSVMCADLVNLENSIKELEAIGVDSLHIDLIDGLFSPSMPLGIDTVKKLRKITNME 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M + + IN + D G + ITFH ESS H R + + G K GVA+NP T ++
Sbjct: 64 FDVHIMSMNNELFINEMLDIGAESITFHYESSFHTDRLINLVKRSGAKVGVALNPATSLS 123
Query: 125 ILEDVIDEIDMILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
+L+ ++ + D IL+M +NPGF G++ + K++ LI K + + ++VDG V+
Sbjct: 124 VLDYILPQCDSILLMLINPGFATDKGEKQVSYADKKVKDLSELIRKNNLDVKIQVDGRVS 183
Query: 180 SRNIKSLVQAGADLLVVGS-SFFNQKGEISYAKRLNDL 216
I LV AGAD LVVGS S F IS K+L D+
Sbjct: 184 LETIPKLVSAGADSLVVGSTSLFIPGNTISENKKLLDI 221
>gi|227893313|ref|ZP_04011118.1| possible ribulose-phosphate 3-epimerase [Lactobacillus ultunensis
DSM 16047]
gi|227864893|gb|EEJ72314.1| possible ribulose-phosphate 3-epimerase [Lactobacillus ultunensis
DSM 16047]
Length = 215
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 8/216 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L I +AG + H D+MDG FVPN+SFG +I+ R + +
Sbjct: 3 IAPSILNADNLNLEANIKEAVEAGISRFHIDIMDGHFVPNLSFGPQLIKDFKREFPMTEA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM ++ D + DAG D I H ES + L + + G +AINP+T V
Sbjct: 63 EIHLMSNNPDDLVPAFVDAGADSIELHYESMNESQLNYWLDYLASNGVSANLAINPDTQV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++E + +I +LIM+V+PGFGGQ I T +I++ + ++ + +EVDGG+ R I
Sbjct: 123 EVIEKFLTKIKQVLIMSVHPGFGGQSFITKTTERIQKTRDIVD--DMPIEVDGGINDRTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
K AGAD+ VVGS + + G I AK+++ L+K+
Sbjct: 181 KMARDAGADVFVVGSYLY-EDGSI--AKQVHKLEKA 213
>gi|227495438|ref|ZP_03925754.1| ribulose-phosphate 3-epimerase [Actinomyces coleocanis DSM 15436]
gi|226830985|gb|EEH63368.1| ribulose-phosphate 3-epimerase [Actinomyces coleocanis DSM 15436]
Length = 230
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 112/197 (56%), Gaps = 4/197 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E++ I A H D+MD FVPN+++G V+ ++ + + D
Sbjct: 15 ISPSILNCDIADLTGELTKIRNA--DYAHVDIMDNHFVPNLTWGLPVVEAVIAKNILPVD 72
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D A+AG +TFH E++ R R + +G K G+ + P T +
Sbjct: 73 AHLMIADPDRWAPAYAEAGSASVTFHAEAAHAPIRLARELRRLGAKAGLGLKPTTDIHDY 132
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
D++ E DMIL+MTV PGFGGQ +ES I KIR+ + R I L +VDGG++ I+
Sbjct: 133 VDLLHEFDMILVMTVEPGFGGQAFLESQIAKIRRVREAANTRQIDLAIQVDGGISRATIE 192
Query: 185 SLVQAGADLLVVGSSFF 201
+AGAD+ V GS+ F
Sbjct: 193 RAAEAGADVFVAGSAVF 209
>gi|150402292|ref|YP_001329586.1| ribulose-phosphate 3-epimerase [Methanococcus maripaludis C7]
gi|150033322|gb|ABR65435.1| Ribulose-phosphate 3-epimerase [Methanococcus maripaludis C7]
Length = 219
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + +E+ + H D+MDG FVPN+S G V L+S +D
Sbjct: 2 VMIGASILSADYGHMEQEVKKAEEGNVDFFHVDIMDGHFVPNLSMGLRVPHYLKSITDVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I +ADA DII FH ESS ++ R++ I G K VA+NP TP+
Sbjct: 62 IDVHLMVENPDLFIPKLADA-ADIIAFHAESSKYLFRTVDMIKEHGAKPIVALNPSTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR--QAKALIGKRSISLEVDGGVTSRN 182
+E V++ + +LIMTV PGF GQ I + KI + K L + VDGG+
Sbjct: 121 NVEYVLENLYGVLIMTVEPGFSGQSFINPMLKKIDNLKNKILAEGYDTKIFVDGGINLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ + G+ K ++DL+ SA
Sbjct: 181 APKAVEAGADALIAASAIY---GKEDVKKAVDDLRNSA 215
>gi|297243506|ref|ZP_06927438.1| pentose-5-phosphate-3-epimerase [Gardnerella vaginalis AMD]
gi|296888551|gb|EFH27291.1| pentose-5-phosphate-3-epimerase [Gardnerella vaginalis AMD]
Length = 221
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 123/220 (55%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G +++ + +
Sbjct: 2 NIQIAPSILSADFCNLERDLDAISNA--DLVHVDVMDHHFVPNLTLGEPIVKRICEVTKL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ + + + K+R+ + I +R ++ ++VDGGV+
Sbjct: 120 EPIFDILDEFDMVLIMTVEPGFGGQKFLANQMNKVRRLRDEITRRGLNTHIQVDGGVSPS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGAD+LV GS+ + + + + + K+A
Sbjct: 180 TAAIVAEAGADVLVAGSAVYGAESPREAIEAIRNTAKAAW 219
>gi|254796717|ref|YP_003081553.1| ribulose-phosphate 3-epimerase [Neorickettsia risticii str.
Illinois]
gi|254589954|gb|ACT69316.1| ribulose-phosphate 3-epimerase [Neorickettsia risticii str.
Illinois]
Length = 217
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 10/206 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+ADF L ++ + ++GA IH DVMDG FVPN +FG +I ++ +
Sbjct: 2 IKISPSLLSADFLNLHSDVKLLEESGADSIHIDVMDGHFVPNFTFGPVIIEQIKRITSIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLMI + + +AG D I H E+ H+ R + I + G K GVA+NP T
Sbjct: 62 IEVHLMILNAEQTFQDYINAGADTIFVHSEACFHLDRMVNAIKSQGVKVGVALNPATSEE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR------SISLEVDGGV 178
L + + ID +LIMTVNPGF Q + S + K+ L+ +R +++ VDGG+
Sbjct: 122 ALRYLYNSIDAVLIMTVNPGFASQTFLTSQLDKV----GLVRRRIVELGVYVTIAVDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ +V AGA+ L+ GS F+ +
Sbjct: 178 NAETANLVVSAGAETLITGSYLFSNR 203
>gi|332024864|gb|EGI65052.1| Ribulose-phosphate 3-epimerase [Acromyrmex echinatior]
Length = 251
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 24/234 (10%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SD 62
S +I PSIL +D +++ +E + GA +H DVMDG FVPN++FG +++ LRS D
Sbjct: 6 SAKIGPSILNSDLAQIYKESQKLLDNGADYLHLDVMDGHFVPNLTFGHPIVKCLRSKIKD 65
Query: 63 SVFDCHLMISSID---------------------SHINIIADAGCDIITFHPESSPHIRR 101
+ + H+M+S + + I +A+AG D TFH E +
Sbjct: 66 AFLETHMMVSKPEQRNILSKDTLDELPLPSERRTNWIEPMAEAGVDQYTFHVEPVEDVPL 125
Query: 102 SLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
R + G K GVA+ P TPV ++ + D DMIL+MTV PGFGGQ+ +E + K+
Sbjct: 126 VCRKVKEAGMKVGVALKPGTPVDVVTNYADLADMILVMTVEPGFGGQKFMEPMLKKVAWL 185
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + +EVDGG+ I++ +AGA+++V G+S N + L D
Sbjct: 186 RE--NYPELDIEVDGGIGLATIEACAKAGANMIVSGTSVINSADQAKVITTLRD 237
>gi|298252797|ref|ZP_06976591.1| pentose-5-phosphate-3-epimerase [Gardnerella vaginalis 5-1]
gi|297533161|gb|EFH72045.1| pentose-5-phosphate-3-epimerase [Gardnerella vaginalis 5-1]
Length = 221
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 123/220 (55%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G +++ + +
Sbjct: 2 NIQIAPSILSADFCNLERDLDAISNA--DLVHVDVMDHHFVPNLTLGEPIVKRICEVTKL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYARLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ + + + K+R+ + I +R ++ ++VDGGV+
Sbjct: 120 EPIFDILDEFDMVLIMTVEPGFGGQKFLANQMNKVRRLRDEITRRGLNTHIQVDGGVSPS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGAD+LV GS+ + + + + + K+A
Sbjct: 180 TAAIVAEAGADVLVAGSAVYGAESPKEAIEAIRNTAKAAW 219
>gi|283783267|ref|YP_003374021.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis 409-05]
gi|283441353|gb|ADB13819.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis 409-05]
Length = 221
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 122/220 (55%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G +++ + +
Sbjct: 2 NIQIAPSILSADFCNLERDLDAISNA--DLVHVDVMDHHFVPNLTLGEPIVKRICEVTKL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV+
Sbjct: 120 EPIFDILDEFDMVLIMTVEPGFGGQKFLANQMNKVRRLRDEITRRGLQTHIQVDGGVSPS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGAD+LV GS+ + + + + + K+A
Sbjct: 180 TAAIVAEAGADVLVAGSAVYGAESPKEAIEAIRNTAKAAW 219
>gi|328866250|gb|EGG14635.1| ribulose phosphate 3-epimerase [Dictyostelium fasciculatum]
Length = 256
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 129/226 (57%), Gaps = 33/226 (14%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVM---------------DGC-----FVPN 46
I PS+L++DF+ L + +++ GA +H DVM C FVPN
Sbjct: 10 ICPSLLSSDFAFLARDANHMLDCGADWLHMDVMFKQLSVTITYTPIYLSFCLFFSHFVPN 69
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-------I 99
++ GA VI+SLR ++ DCHLM+++ ++ I+ +AG D ITFH E++ +
Sbjct: 70 LTIGAPVIKSLRKHTKGHLDCHLMVTNPETLIDDFKNAGADGITFHIEATANRAGGVDIT 129
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAI----LEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
++ I A G + G++I P+TPV + L+D ++ +D ILIMTV PGFGGQ ++ +
Sbjct: 130 ADVIKKIKAAGMQCGISIKPKTPVDVLFPFLDDSVNIVDFILIMTVEPGFGGQSFMQDMM 189
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
PK+ + +++++VDGG+ I + QAGA+++V GSS F
Sbjct: 190 PKVSTLRQRY--PNLNIQVDGGIDPNTIGTAAQAGANIVVAGSSLF 233
>gi|330466986|ref|YP_004404729.1| ribulose-phosphate 3-epimerase [Verrucosispora maris AB-18-032]
gi|328809957|gb|AEB44129.1| ribulose-phosphate 3-epimerase [Verrucosispora maris AB-18-032]
Length = 226
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + + PSILAADF+RL EE+ + A A +H DVMD FVPN++ G V++SLR+ ++
Sbjct: 4 PPLIVAPSILAADFARLAEEVRAVENA-ADWLHVDVMDNHFVPNLTIGLPVVQSLRAATE 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI ADAG +TFH E+ + + A G K G+AI+ +TP
Sbjct: 63 LPFDVHLMIEDPQRWAPGYADAGAYNVTFHAEACDDPVALAKDLRAAGAKAGLAIDRDTP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTS 180
+ D++ D +L+MT+ GFGGQ+ I + K+R + G + +EVDGG+ +
Sbjct: 123 IEPYLDLLPNFDTLLVMTIKAGFGGQRFIPQLLDKVRAVRRHRDAGHLELRIEVDGGIAA 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ AGAD V G++ + +RL L + A
Sbjct: 183 DTIEQAAAAGADAFVAGTAVYGADDPAEAVRRLRQLAERA 222
>gi|193084087|gb|ACF09757.1| ribulose-phosphate 3-epimerase [uncultured marine group III
euryarchaeote AD1000-40-D7]
Length = 200
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 6/201 (2%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+L ADF R+ E + + + +H DVMDG FVPN++ G D+++SL + D HLM
Sbjct: 1 MLGADFGRM-REAAEMVAPHSAYLHMDVMDGHFVPNLTMGPDLVKSLEGIAP--LDVHLM 57
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
++ I DAG +II+ H E++ + ++L++I K G+A+NP TP + +E I
Sbjct: 58 VTDPIDFIEDFRDAGAEIISVHVEAN-NTLKALKSIKKNNMKAGIALNPSTPESSIEPFI 116
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
D D+IL+M+V PG+ GQ E+T+ ++R K + + EVDGGV+ N + LV AG
Sbjct: 117 DLADIILVMSVEPGYCGQDFHENTVERVRHYKKTYPDKIV--EVDGGVSPSNSERLVDAG 174
Query: 191 ADLLVVGSSFFNQKGEISYAK 211
AD+LV GS+ F I K
Sbjct: 175 ADILVAGSAIFKADEPIEIVK 195
>gi|331658049|ref|ZP_08359011.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
gi|331056297|gb|EGI28306.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
Length = 160
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 104/157 (66%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSI AD RL +EI + + + +H D+MDG +V NI+FG + I +++ S +F
Sbjct: 3 KILPSIFGADILRLKDEIHFLEEEQTEILHVDLMDGTYVSNIAFGPNQIAAMKKASSMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + HI+ + + G ++++ H ES+PH+ ++ I G+K GV +NP TP ++
Sbjct: 63 DVHMMLANPERHIDDVINTGAEMVSVHYESTPHVHYIIQKIKKAGRKAGVVLNPGTPESV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
+E ++D+ID IL+MT+NPG GQ I ++ KIR K
Sbjct: 123 IEYLLDDIDYILLMTINPGQPGQTFIHKSLEKIRNTK 159
>gi|15668861|ref|NP_247664.1| pentose-5-phosphate-3-epimerase [Methanocaldococcus jannaschii DSM
2661]
gi|2833527|sp|Q58093|RPE_METJA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|1591395|gb|AAB98675.1| pentose-5-phosphate-3-epimerase [Methanocaldococcus jannaschii DSM
2661]
Length = 234
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 123/222 (55%), Gaps = 4/222 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I SIL+ADF L EEI +AG H D+MDG FVPNIS G + + ++ ++
Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+ ++D +N + D ITFH E+ R + I ++G K VA+NP TP+
Sbjct: 62 VEVHLMVENVDLFVNEFEE--MDYITFHIEAVKFPFRIINRIKSIGAKPIVALNPATPLD 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+E ++ ++ +L+MTV PGF GQ+ I KIR+ K++I + + VDGG+
Sbjct: 120 AIEYILGDVYAVLVMTVEPGFSGQKFIPVMTKKIRKLKSMIVENGYDTKIFVDGGINVET 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V+AGAD+LV S+ F + + K L + AL D
Sbjct: 180 APLAVKAGADVLVAASAIFGKDDVKTAVKNLREAALEALNKD 221
>gi|213965572|ref|ZP_03393766.1| ribulose-phosphate 3-epimerase [Corynebacterium amycolatum SK46]
gi|213951731|gb|EEB63119.1| ribulose-phosphate 3-epimerase [Corynebacterium amycolatum SK46]
Length = 222
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 4/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL E++ + A A +H DVMDG FVPN+SFGA V+ ++ + + D
Sbjct: 6 IAPSILAADFARLDREVAAV--ANADWLHIDVMDGHFVPNLSFGAPVLAAVAAVTGKYLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ AG + FH E++ R I + G K G ++ P TP+
Sbjct: 64 VHLMIENPEKWVDTYIKAGASSVIFHVEAADDAIALARRIRSQGVKAGFSLRPGTPIEPW 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D + E D +L+M+V PGFGGQ + + K+ + + I + +E+DGG++++ I+
Sbjct: 124 LDHLAEFDEVLVMSVEPGFGGQSFMPDQLAKVEKLRERIDAEGLDTLIEIDGGISAKTIE 183
Query: 185 SLVQAGADLLVVGSSFFNQK 204
S AG D V GS+ F +
Sbjct: 184 SAAAAGCDAFVAGSAVFGAE 203
>gi|16801871|ref|NP_472139.1| hypothetical protein lin2810 [Listeria innocua Clip11262]
gi|16415346|emb|CAC98036.1| lin2810 [Listeria innocua Clip11262]
Length = 224
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 122/211 (57%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGIYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ A A + I+FH E + + ++ I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMYATAKPEYISFHVEVAEDVSEVIQKIRSYNIKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +DE++M+L+MTVNPGF GQ+ +PK+ KA L GK L EVDG + +
Sbjct: 123 IYPYLDEVEMVLMMTVNPGFAGQKFQTDVLPKLHDLKAKLEGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|88608693|ref|YP_506225.1| ribulose-phosphate 3-epimerase [Neorickettsia sennetsu str.
Miyayama]
gi|88600862|gb|ABD46330.1| ribulose-phosphate 3-epimerase [Neorickettsia sennetsu str.
Miyayama]
Length = 220
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 2/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PS+L+ADF L ++ + ++GA IH DVMDG FVPN++FG +I ++
Sbjct: 1 MHRMIKISPSLLSADFLNLHSDVKLLEESGADSIHIDVMDGHFVPNLTFGPVIIEQIKRI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + HLMI + + +AG D I H E+ H+ R + I + K GVA+NP
Sbjct: 61 TSIPIEVHLMILNAEQTFQDYINAGADTIFVHSEACFHLDRMVNAIKSQSVKVGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
T L + + ID +LIMTVNPGF Q + S + K+ + I + ++L VDGG+
Sbjct: 121 TSEEALRYLYNSIDAVLIMTVNPGFASQVFLTSQLAKVSLVRRRIVELGVDVTLAVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ +V AGA LV GS F+ + +
Sbjct: 181 NAETANLVVSAGAGTLVTGSYLFSNRKNL 209
>gi|198423986|ref|XP_002130609.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase isoform 1
[Ciona intestinalis]
gi|198423988|ref|XP_002130627.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase isoform 2
[Ciona intestinalis]
Length = 231
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 125/216 (57%), Gaps = 9/216 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDS 63
+I PSIL +D + LG E + + GA +H DVMDG FVPNI+FG V++ +R
Sbjct: 7 KIGPSILNSDLACLGAECKRMLECGADYLHLDVMDGHFVPNITFGHPVVQCIRKSIGEGP 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ + H+M+S D + ++++G +I TFH E+S + ++ ++ I G K G AI P TPV
Sbjct: 67 ICEVHMMVSRPDQWVKAMSESGANIYTFHLEASDNPQQLIKEIREEGMKAGCAIKPATPV 126
Query: 124 AILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ L D++ D+ L+MTV PGFGGQ + + K+R+ + + + VDGGV
Sbjct: 127 SKLIDLLHTQMADVALVMTVEPGFGGQSFMRPMMEKVRELRK--AYPHLDIGVDGGVGPS 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+I +AGA+++V GS+ + K ++DL+
Sbjct: 185 SIHHCAEAGANMIVSGSAIMRSN---NPCKVISDLR 217
>gi|17552948|ref|NP_498620.1| hypothetical protein F08F8.7 [Caenorhabditis elegans]
gi|14574055|gb|AAK68310.1|U28991_8 Hypothetical protein F08F8.7 [Caenorhabditis elegans]
Length = 227
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 116/203 (57%), Gaps = 7/203 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + PSIL AD + L E + AGA +H DVMDG FVPN++FG V+ SLR
Sbjct: 1 MTLRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVESLRKS 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGV 115
++ FD HLM+S+ + +A AG TFH E+ + + I G K G+
Sbjct: 61 LGAEPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
++ P T V + + +D LIMTV PGFGGQ+ +E+ + K+R ++ +++++VD
Sbjct: 121 SVKPGTSVEHILKHANHLDNALIMTVEPGFGGQKFMENMMEKVRTIRSKY--PNLTIQVD 178
Query: 176 GGVTSRNIKSLVQAGADLLVVGS 198
GGVT NI+ QAGA+ +V G+
Sbjct: 179 GGVTPENIEISAQAGANAIVSGT 201
>gi|331650114|ref|ZP_08351187.1| ribulose-phosphate 3-epimerase [Escherichia coli M605]
gi|330908423|gb|EGH36942.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli AA86]
gi|331041059|gb|EGI13216.1| ribulose-phosphate 3-epimerase [Escherichia coli M605]
Length = 231
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA ++ + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWRERKDLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|254853868|ref|ZP_05243216.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|255520974|ref|ZP_05388211.1| ribulose-5-phosphate 3 epimerase [Listeria monocytogenes FSL
J1-175]
gi|300765150|ref|ZP_07075136.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|258607253|gb|EEW19861.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|300514121|gb|EFK41182.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
Length = 222
Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKAG-SYTEKLASLRE 217
>gi|294891829|ref|XP_002773759.1| Ribulose-phosphate 3-epimerase, putative [Perkinsus marinus ATCC
50983]
gi|239878963|gb|EER05575.1| Ribulose-phosphate 3-epimerase, putative [Perkinsus marinus ATCC
50983]
Length = 254
Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 118/218 (54%), Gaps = 24/218 (11%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY------ 60
+ PS+LAADF+ L + + K GA +H D MDG FVPN+SFG V+ SL Y
Sbjct: 9 VAPSVLAADFANLAHDCDEVVKGGADWLHLDFMDGHFVPNLSFGFPVVESLDKYYKKQES 68
Query: 61 ----SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM---GKKT 113
+ FD H+M+S+ I + GC+ + FH E+ LR A+ G +
Sbjct: 69 ETGHAHPFFDAHIMVSNPMQWIEDLKKCGCNQVDFHIEAVKDHDECLRVCQAIREKGMRV 128
Query: 114 GVAINPETPVAILEDVID----------EIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
G+A+ P+TP++ ++ V+D ID +L+MTV PGFGGQ+ + + K+ +A+
Sbjct: 129 GIAVKPKTPISAVQSVLDIGRKDGAEKAIIDDLLVMTVEPGFGGQKFMPDMMVKVEEARK 188
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
G S+ + VDGG+ S AGA+++V GS+ F
Sbjct: 189 RYG-HSLDITVDGGLNSTTSIVAGDAGANVIVAGSAVF 225
>gi|237808716|ref|YP_002893156.1| allulose-6-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
gi|237500977|gb|ACQ93570.1| Ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
Length = 227
Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 115/202 (56%), Gaps = 5/202 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ ++ ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFIDQH-ADYFHIDIMDGHFVPNLTLSPFFVQQVKRVATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM+++ +I + +G IT HPE+ S R + I +G K G+ +NPE+P+
Sbjct: 60 LDCHLMVTNPQDYIEPLVQSGAGFITLHPETLSGQAFRLIEKIQNLGVKIGLILNPESPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
+++ I ++D I +MTV+PGF GQ + + KI+Q K K + +E+DG
Sbjct: 120 EMIKYYIHKVDKITVMTVDPGFAGQSFVPEMLDKIKQLKIYREENKLNYEIEIDGSCNKN 179
Query: 182 NIKSLVQAGADLLVVGSS-FFN 202
K L++AGAD+ +VGSS FN
Sbjct: 180 TYKQLIEAGADVFIVGSSGLFN 201
>gi|254824227|ref|ZP_05229228.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|254992413|ref|ZP_05274603.1| ribulose-5-phosphate 3 epimerase [Listeria monocytogenes FSL
J2-064]
gi|293593460|gb|EFG01221.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
Length = 222
Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKAG-SYTEKLAPLRE 217
>gi|225156195|ref|ZP_03724675.1| Ribulose-phosphate 3-epimerase [Opitutaceae bacterium TAV2]
gi|224803085|gb|EEG21328.1| Ribulose-phosphate 3-epimerase [Opitutaceae bacterium TAV2]
Length = 220
Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 3/207 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
+ PS+LA + +RL + + +H D+MDG FVPN+SFG + LR + F
Sbjct: 8 LAPSLLAGNHARLADSAQIVASHAIPWLHLDIMDGHFVPNLSFGPQTVADLRPTLPGLFF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +I A AG ++I+ H E + +LR I +G + G+ +NP TP
Sbjct: 68 DTHLMLDEPHRYIEPFAKAGANLISIHIEPAYDHAATLRRIRELGCQNGIVLNPGTPADA 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E + +D++L+MTV PGFGGQ +PKI Q +R + LEVDGG+
Sbjct: 128 IEPHLAHVDLVLVMTVQPGFGGQSFRRDMLPKIAQIDRWRAERGLRFRLEVDGGIDLATG 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYA 210
G D V G++FF ++A
Sbjct: 188 AECAAVGTDTFVAGTAFFKAPDRAAFA 214
>gi|313622147|gb|EFR92705.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL J1-023]
Length = 226
Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 5 KIAASIMCADQLHLGDELQRLESAGVELLHCDVMDGIYVNNLALGPEYLEIVRNNTEIPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ A A + I+FH E + + ++ I + K +AINPETP+
Sbjct: 65 DIHLATITPLKYIDMYATAKPEYISFHVEVAEDVSEVIQKIRSYNIKPSIAINPETPIEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +DE++M+L+MTVNPGF GQ+ +PK+ KA L GK L EVDG + +
Sbjct: 125 IYPYLDEVEMVLMMTVNPGFAGQKFQTDVLPKLHDLKAKLEGKVHAPLIEVDGNINKETV 184
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 185 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 215
>gi|7498654|pir||T15978 hypothetical protein F08F8.4 - Caenorhabditis elegans
Length = 1741
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 116/203 (57%), Gaps = 7/203 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + PSIL AD + L E + AGA +H DVMDG FVPN++FG V+ SLR
Sbjct: 1515 MTLRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVESLRKS 1574
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGV 115
++ FD HLM+S+ + +A AG TFH E+ + + I G K G+
Sbjct: 1575 LGAEPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGL 1634
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
++ P T V + + +D LIMTV PGFGGQ+ +E+ + K+R ++ +++++VD
Sbjct: 1635 SVKPGTSVEHILKHANHLDNALIMTVEPGFGGQKFMENMMEKVRTIRS--KYPNLTIQVD 1692
Query: 176 GGVTSRNIKSLVQAGADLLVVGS 198
GGVT NI+ QAGA+ +V G+
Sbjct: 1693 GGVTPENIEISAQAGANAIVSGT 1715
>gi|26250902|ref|NP_756942.1| allulose-6-phosphate 3-epimerase [Escherichia coli CFT073]
gi|91213634|ref|YP_543620.1| allulose-6-phosphate 3-epimerase [Escherichia coli UTI89]
gi|237703673|ref|ZP_04534154.1| allulose-6-phosphate 3-epimerase [Escherichia sp. 3_2_53FAA]
gi|26111334|gb|AAN83516.1|AE016771_27 D-allulose-6-phosphate 3-epimerase [Escherichia coli CFT073]
gi|91075208|gb|ABE10089.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli UTI89]
gi|226901585|gb|EEH87844.1| allulose-6-phosphate 3-epimerase [Escherichia sp. 3_2_53FAA]
Length = 233
Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 2 NMKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASK 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETP
Sbjct: 61 PLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
V ++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 121 VEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQ 180
Query: 181 RNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 181 ATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 214
>gi|226223124|ref|YP_002757231.1| ribulose-5-phosphate 3 epimerase [Listeria monocytogenes Clip81459]
gi|225875586|emb|CAS04289.1| Putative ribulose-5-phosphate 3 epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 222
Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQRELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKAG-SYTEKLAPLRE 217
>gi|268576292|ref|XP_002643126.1| Hypothetical protein CBG15299 [Caenorhabditis briggsae]
gi|187027210|emb|CAP33636.1| hypothetical protein CBG_15299 [Caenorhabditis briggsae AF16]
Length = 229
Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 114/204 (55%), Gaps = 8/204 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDSV 64
+ PSIL AD + L E + AGA +H DVMDG FVPN++ G V+ SLR D+
Sbjct: 7 VCPSILNADLAALASECKKLLAAGADWLHLDVMDGHFVPNLTIGHPVVESLRKSLGPDAF 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTGVAINPE 120
FD HLM+S+ ++ +A AG TFH E+ + + I G K G+++ P
Sbjct: 67 FDVHLMVSNPGQWVDPMAKAGASQFTFHYEAVDGGDVAVGELIEKIRKSGMKVGLSVKPG 126
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T V + + ID LIMTV PGFGGQ+ +E+ + K+R + S++++VDGGVT
Sbjct: 127 TSVEHILKHAEHIDNALIMTVEPGFGGQKFMENMMEKVRAIRN--AHPSLTVQVDGGVTP 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
NI+ +AGA+ +V G+ K
Sbjct: 185 ENIEISAKAGANAIVSGTGIIKAK 208
>gi|317508960|ref|ZP_07966593.1| ribulose-phosphate 3-epimerase [Segniliparus rugosus ATCC BAA-974]
gi|316252725|gb|EFV12162.1| ribulose-phosphate 3-epimerase [Segniliparus rugosus ATCC BAA-974]
Length = 222
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 124/217 (57%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +++ + GA +H DVMD FVPN++ GA V+ S++ +D D
Sbjct: 9 IAPSILSADFANLARDVAAVR--GADWLHVDVMDNHFVPNLTLGAPVVASIKKATDIPLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI A+ G +TFH E+S R I A G G+AI P TP+
Sbjct: 67 CHLMIEDPARWAPEYAEIGAKNVTFHAEASDDPLAVARDIRAAGAGAGLAIKPGTPLEPY 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+V+ D +L+M+V PGFGGQ+ I + K+R +A+ G+ ++ +E+DGG+ I+
Sbjct: 127 LEVLRGFDTVLVMSVEPGFGGQKFIPEVLDKVRTLRAVKDRGELTVLIEIDGGINMDTIE 186
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AG D V GS+ + G A+ + L+++AL
Sbjct: 187 AAAEAGVDCFVAGSAVY---GAADPAQAVEALRQAAL 220
>gi|6091725|gb|AAF03437.1|AC010797_13 putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
Length = 233
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 16/211 (7%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVM--------DGCFVPNISFGADVIR 55
S +I PS+L++DF+ L E + + GA +H D+M G FVPN++ GA VI
Sbjct: 3 SPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMVPTFYSLLWGHFVPNLTIGAPVIE 62
Query: 56 SLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTG 114
SLR ++++ DCHLM+++ ++ +A AG TFH E + + ++ + I + G + G
Sbjct: 63 SLRKHTNAYLDCHLMVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPG 122
Query: 115 VAINPETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SI 170
VA+ P TPV + +++ ++M+L+MTV PGFGGQ+ + + K+R AL K ++
Sbjct: 123 VALKPGTPVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVR---ALRQKYPTL 179
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
++VDGG+ I + AGA+ +V GSS F
Sbjct: 180 DIQVDGGLGPSTIDTAAAAGANCIVAGSSVF 210
>gi|134045513|ref|YP_001096999.1| ribulose-5-phosphate 3-epimerase [Methanococcus maripaludis C5]
gi|132663138|gb|ABO34784.1| ribulose-5-phosphate 3-epimerase [Methanococcus maripaludis C5]
Length = 219
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + +E+ + H D+MDG FVPN+S G V L+S +D
Sbjct: 2 VMIGASILSADYGHMEQEVKKAEEGNIDFFHVDIMDGHFVPNLSMGLRVPHYLKSITDVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + I +ADA DII FH ESS ++ R++ I K VA+NP TP+
Sbjct: 62 IDVHLMVENPELFIPKLADA-ADIIAFHAESSKYLFRTVDMIKEHDAKPIVALNPSTPIG 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR--QAKALIGKRSISLEVDGGVTSRN 182
+E V++ + +L+MTV PGF GQ I + KI + K L + + VDGG+
Sbjct: 121 NVEYVLENLYGVLVMTVEPGFSGQSFINPMLKKIDNLKNKILTEGYNTKIFVDGGINLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ + G+ K +NDL+ SA
Sbjct: 181 APKAVEAGADALIAASAIY---GKEDVKKAVNDLRNSA 215
>gi|117626373|ref|YP_859696.1| allulose-6-phosphate 3-epimerase [Escherichia coli APEC O1]
gi|218561176|ref|YP_002394089.1| allulose-6-phosphate 3-epimerase [Escherichia coli S88]
gi|218692382|ref|YP_002400594.1| allulose-6-phosphate 3-epimerase [Escherichia coli ED1a]
gi|306815781|ref|ZP_07449930.1| allulose-6-phosphate 3-epimerase [Escherichia coli NC101]
gi|331660675|ref|ZP_08361607.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
gi|115515497|gb|ABJ03572.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli APEC O1]
gi|218367945|emb|CAR05743.1| allulose-6-phosphate 3-epimerase [Escherichia coli S88]
gi|218429946|emb|CAR10924.2| allulose-6-phosphate 3-epimerase [Escherichia coli ED1a]
gi|222035814|emb|CAP78559.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli LF82]
gi|281181176|dbj|BAI57506.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli SE15]
gi|294493516|gb|ADE92272.1| ribulose-phosphate 3-epimerase [Escherichia coli IHE3034]
gi|305851443|gb|EFM51898.1| allulose-6-phosphate 3-epimerase [Escherichia coli NC101]
gi|307556256|gb|ADN49031.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli ABU 83972]
gi|307629157|gb|ADN73461.1| allulose-6-phosphate 3-epimerase [Escherichia coli UM146]
gi|312948680|gb|ADR29507.1| allulose-6-phosphate 3-epimerase [Escherichia coli O83:H1 str. NRG
857C]
gi|320193464|gb|EFW68101.1| allulose-6-phosphate 3-epimerase [Escherichia coli WV_060327]
gi|323954428|gb|EGB50212.1| ribulose-phosphate 3-epimerase [Escherichia coli H263]
gi|331051717|gb|EGI23756.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
Length = 231
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|46906744|ref|YP_013133.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|254933253|ref|ZP_05266612.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|46880009|gb|AAT03310.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|293584813|gb|EFF96845.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|328475803|gb|EGF46539.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes 220]
gi|332310921|gb|EGJ24016.1| hypothetical protein LMOSA_14040 [Listeria monocytogenes str. Scott
A]
Length = 222
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T + +
Sbjct: 64 IHLATVNPDRFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQRELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKAG-SYTEKLAPLRE 217
>gi|25028273|ref|NP_738327.1| ribulose-phosphate 3-epimerase [Corynebacterium efficiens YS-314]
gi|259507331|ref|ZP_05750231.1| ribulose-phosphate 3-epimerase [Corynebacterium efficiens YS-314]
gi|23493557|dbj|BAC18527.1| putative ribulose-phosphate 3-epimerase [Corynebacterium efficiens
YS-314]
gi|259165042|gb|EEW49596.1| ribulose-phosphate 3-epimerase [Corynebacterium efficiens YS-314]
Length = 221
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 118/197 (59%), Gaps = 4/197 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAAD++RLGEEI+ + A IH D+MDG FVPN+SFG DV R++ +D D
Sbjct: 9 IAPSILAADYARLGEEIAAVPDA--DWIHVDIMDGHFVPNLSFGYDVTRAVHRVTDKPLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ DAG + FH E++ + I + G + G ++ P TP+
Sbjct: 67 VHLMIENPEKWVDHYIDAGAACVIFHVEATDKHVELAQHIRSKGVRAGFSLRPGTPIEDY 126
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
D ++ D +++M+V PGFGGQ + + K+R + +I +R + +E+DGG+++ I+
Sbjct: 127 LDDLEHFDEVIVMSVEPGFGGQSFMPDQLDKVRTLRRVIDERGLDIIIEIDGGISATTIE 186
Query: 185 SLVQAGADLLVVGSSFF 201
+AG D V GS+ F
Sbjct: 187 QAAEAGVDAYVAGSAVF 203
>gi|256810570|ref|YP_003127939.1| ribulose-phosphate 3-epimerase [Methanocaldococcus fervens AG86]
gi|256793770|gb|ACV24439.1| ribulose-phosphate 3-epimerase [Methanocaldococcus fervens AG86]
Length = 220
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 121/219 (55%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SIL+ADF L EEI +AG H D+MDG FVPNIS G + + ++ +
Sbjct: 2 VKIGASILSADFGNLNEEIKKAEEAGVDFFHVDIMDGHFVPNISIGIGIAKDIKKIAKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I+ G D ITFH E+ R+++ I +G + VA+NP T ++
Sbjct: 62 VDAHLMVENPDQFIDEFK--GMDYITFHIEAVKFPFRTIKKIREIGAEPIVALNPATSLS 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+ ++ E+ +LIMTV PGF GQ+ I KI + K +I + VDGG+
Sbjct: 120 SVGYILGEVHAVLIMTVEPGFSGQKFIPIMTKKIEKLKDIIANNGYDTKIFVDGGINVET 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
V+AGAD+L+ S+ F G+ K + DL++SAL
Sbjct: 180 APLAVKAGADVLIAASAIF---GKEDIKKAVKDLRESAL 215
>gi|331681021|ref|ZP_08381658.1| ribulose-phosphate 3-epimerase [Escherichia coli H299]
gi|331081242|gb|EGI52403.1| ribulose-phosphate 3-epimerase [Escherichia coli H299]
Length = 231
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFIDN-HADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|324112169|gb|EGC06147.1| ribulose-phosphate 3-epimerase [Escherichia fergusonii B253]
Length = 231
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKIAPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I+ +A AG + IT HPE+ + R + I +G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYISQLAQAGANFITLHPETINGQAFRLIDEIRRLGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + KI + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLNKIAELKAWREREGLHYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
L+ AGAD+ +VG+S FN I+ A ++
Sbjct: 180 TYDRLIAAGADVFIVGTSGLFNHADNITDAWQV 212
>gi|218551502|ref|YP_002385294.1| allulose-6-phosphate 3-epimerase [Escherichia fergusonii ATCC
35469]
gi|218359044|emb|CAQ91704.1| allulose-6-phosphate 3-epimerase [Escherichia fergusonii ATCC
35469]
Length = 228
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKIAPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I+ +A AG + IT HPE+ + R + I +G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYISQLAQAGANFITLHPETINGQAFRLIDEIRRLGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + KI + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLNKIAELKAWREREGLHYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
L+ AGAD+ +VG+S FN I+ A ++
Sbjct: 180 TYDRLIAAGADVFIVGTSGLFNHADNITDAWQV 212
>gi|171911153|ref|ZP_02926623.1| ribulose-phosphate 3-epimerase [Verrucomicrobium spinosum DSM 4136]
Length = 224
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 5/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PS+LAADFS + E+ AGA+ +H DVMDG FV NISFG +I +++ ++D D
Sbjct: 8 ILPSLLAADFSNVAAEVKRAEDAGAQWLHLDVMDGNFVDNISFGPAMIEAVKRHTDMFLD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI D ++ AG I+ H E+ + +L+ I + G G+ +NP TP
Sbjct: 68 VHLMIQRADHFLDRFIKAGAGNISVHVEARYDTSLLSTLQRIKSAGLSAGLVLNPSTPFE 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIE-STIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ ID++LIMTV PGFGGQ +E T+PK+ A+ + L+VDGG+
Sbjct: 128 AAIPYLHLIDLLLIMTVVPGFGGQPFMEKETMPKLAAARDYREAHGLKYHLQVDGGIYVT 187
Query: 182 NIKSLVQAGADLLVVGSSFF 201
Q GA+L V G+S F
Sbjct: 188 TAPIARQHGANLFVAGTSSF 207
>gi|47093123|ref|ZP_00230899.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 4b H7858]
gi|47018496|gb|EAL09253.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 4b H7858]
gi|328467568|gb|EGF38630.1| ribulose-5-phosphate 3 epimerase [Listeria monocytogenes 1816]
Length = 222
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ +D L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCSDSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQRELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKAG-SYTEKLAPLRE 217
>gi|254478100|ref|ZP_05091483.1| Ribulose-phosphate 3 epimerase family protein [Carboxydibrachium
pacificum DSM 12653]
gi|214035962|gb|EEB76653.1| Ribulose-phosphate 3 epimerase family protein [Carboxydibrachium
pacificum DSM 12653]
Length = 214
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILAAD + LG+E+ + K G IH DV+DG + N F ++ L+ ++
Sbjct: 1 MKISASILAADTAFLGKEVLELEKLGIDFIHVDVIDGHYANNFGFSPKTVKDLKRITNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HL I + +++I ++AG DII ++ H R LR I A+GKK GVA++P
Sbjct: 61 IEVHLEILNPENYIETFSEAGADIIIVQFDTCSHPLRILRKIKALGKKAGVALSPCVSFE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
L ++++D +L M+V PGFGGQ TI KI+ AK + + SI + VDGGV N
Sbjct: 121 SLRWCLNDVDYLLFMSVEPGFGGQNFETFTIDKIKLAKVQLKEMGFSIPIGVDGGVNLGN 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
I L + G D++VVGS+ F
Sbjct: 181 INLLREVGVDIVVVGSALF 199
>gi|110644444|ref|YP_672174.1| allulose-6-phosphate 3-epimerase [Escherichia coli 536]
gi|191172040|ref|ZP_03033585.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli F11]
gi|110346036|gb|ABG72273.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli 536]
gi|190907805|gb|EDV67399.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli F11]
Length = 231
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEICRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|261337791|ref|ZP_05965675.1| ribulose-phosphate 3-epimerase [Bifidobacterium gallicum DSM 20093]
gi|270277244|gb|EFA23098.1| ribulose-phosphate 3-epimerase [Bifidobacterium gallicum DSM 20093]
Length = 222
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L +++ I A A +H DVMD FVPN++ G +++ + +
Sbjct: 3 AIQIAPSILSADFCNLERDLNRI--ANADLVHVDVMDHHFVPNLTMGEPIVQRICEVTPV 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G +TFH ++ R R +H MG + A+ P PV
Sbjct: 61 PADVHLMIEDPDRWAPEFAKLGAKSVTFHMGATHAPVRLARQLHDMGCEACFAVRPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D+++E D ILIMTV PGFGGQ+ + + + K+R+ + I +R + +++VDGGV+
Sbjct: 121 EPIFDILEEFDTILIMTVEPGFGGQKFLGNQMDKVRRLRDEITRRGLKTNIQVDGGVSPS 180
Query: 182 NIKSLVQAGADLLVVGSSFF 201
+ AGA++LV GS+ +
Sbjct: 181 TAPIVAAAGANILVAGSAVY 200
>gi|154483828|ref|ZP_02026276.1| hypothetical protein EUBVEN_01532 [Eubacterium ventriosum ATCC
27560]
gi|149735319|gb|EDM51205.1| hypothetical protein EUBVEN_01532 [Eubacterium ventriosum ATCC
27560]
Length = 224
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A++ L +E++++ +AG H D+MDG FVPN G + + S D
Sbjct: 13 LCPSMMCANYRNLEKEVNDLIEAGVDIFHIDIMDGQFVPNFGMGLQDVEYICKASTIPVD 72
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++ A G DII HPES H R+L++I +G K G+AINP T V +
Sbjct: 73 AHLMIENPGNYVEKFAKLGIDIIYIHPESDVHPTRTLQSIIDLGVKPGIAINPGTAVETI 132
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ ++ +D +++M+VNPGF GQ+ I S KI Q L K + +DG + +++L
Sbjct: 133 KPLLPFVDYVMVMSVNPGFSGQKYISSVDEKIAQLVELKEKYGYEVMLDGACSPERVETL 192
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ G ++G+S K E SY + + +L+
Sbjct: 193 SKVGVKGFILGTSALFGK-EKSYKEIVKELR 222
>gi|257076717|ref|ZP_05571078.1| ribulose-phosphate 3-epimerase [Ferroplasma acidarmanus fer1]
Length = 213
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 115/199 (57%), Gaps = 2/199 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSI++++ LG +I AGA H D+MDG FV NI+ G D++ ++R ++
Sbjct: 1 MEISPSIISSNLLELGTQIKECQDAGAGSFHLDIMDGHFVDNITMGPDLVAAIRKGTNLR 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D + +AG D++ H E+ + ++ + G+ INP+T V
Sbjct: 61 LDCHLMIERPDRYYKSFINAGADVLLIHYETPIEVINLIKKFQDENIRYGIVINPDTDVK 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +I +++L+M+V PGF GQ+ IE ++ K++ + I + + S +E+DGG+ +
Sbjct: 121 KIYKLIPGSEIVLVMSVFPGFSGQKFIEKSLEKVKALREFIDENNYSTRIEIDGGINNET 180
Query: 183 IKSLVQAGADLLVVGSSFF 201
K V+AGAD+LV S F
Sbjct: 181 GKLAVEAGADILVSASYIF 199
>gi|325684570|gb|EGD26731.1| ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 216
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 3 IAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDLTA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PH-IRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM +++ + AG D+I H E+ P+ I L + G G+ ++P+T +
Sbjct: 63 EVHLMSNNLPDLLPAFVKAGSDLIEIHYEADYPNRIDHWLDYLKENGVSCGLVLSPDTDI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+LE D++D +L+MTV PGFGGQ+ +E +I+ A+A++ + +EVDGG+ ++
Sbjct: 123 KVLERYKDKLDQVLLMTVYPGFGGQKFMEEAADRIKAARAIL--PDLPIEVDGGINAQTA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGAD+ V GS F G S AK++ +L
Sbjct: 181 EITKEAGADVFVAGSYIF---GRDSVAKQVAEL 210
>gi|308490739|ref|XP_003107561.1| hypothetical protein CRE_13345 [Caenorhabditis remanei]
gi|308250430|gb|EFO94382.1| hypothetical protein CRE_13345 [Caenorhabditis remanei]
Length = 228
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 8/198 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDSV 64
+ PSIL AD + L E + AGA +H DVMDG FVPN++FG V+ SLR S+
Sbjct: 7 VCPSILNADLASLASECKKLLTAGADWLHLDVMDGHFVPNLTFGHPVVESLRKSLGSEPF 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTGVAINPE 120
FD HLM+S+ + +A AG TFH E+ + + I G K G+++ P
Sbjct: 67 FDVHLMVSNPGQWVEPMAKAGATQFTFHYEAIDGGDVAVGELIEKIRKSGMKVGLSVKPG 126
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T V + + +D LIMTV PGFGGQ+ +E+ + K+R ++ ++++VDGGVT
Sbjct: 127 TSVEHILKHAEHLDNALIMTVEPGFGGQKFMENMMEKVRTIRS--AHPELTIQVDGGVTP 184
Query: 181 RNIKSLVQAGADLLVVGS 198
NI +AGA+ +V G+
Sbjct: 185 ENIDISAKAGANAIVSGT 202
>gi|296395035|ref|YP_003659919.1| ribulose-phosphate 3-epimerase [Segniliparus rotundus DSM 44985]
gi|296182182|gb|ADG99088.1| ribulose-phosphate 3-epimerase [Segniliparus rotundus DSM 44985]
Length = 216
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 122/214 (57%), Gaps = 4/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +++ + GA +H DVMD FVPN++ GA V+ S++ +D D
Sbjct: 2 IAPSILSADFANLARDVAAVR--GADWLHVDVMDNHFVPNLTLGAPVVASIKKATDIPLD 59
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI A+ G +TFH E++ + + I A G G+AI P T +
Sbjct: 60 CHLMIEDPARWAPQYAEIGAKNVTFHAEAADNPLAVAKDIRAAGAGAGLAIKPGTALDPY 119
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNIK 184
DV+ D +LIM+V PGFGGQ+ + + K+R+ +AL G+ ++ +E+DGG+ + I+
Sbjct: 120 LDVLSGFDTVLIMSVEPGFGGQKFLPDVLDKVRRLRALKDKGELTVLIEIDGGINRQTIQ 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AG D V GS+ + + + L +L +
Sbjct: 180 AAAEAGVDCFVAGSAVYGAEDPEKAVESLRELAR 213
>gi|83674978|gb|ABC40669.1| rcRPE [Hylobates lar]
Length = 228
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 4/201 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DV+DG F PNI+FG V+ S R
Sbjct: 1 MVSGCKIGPSILNSDLANLGAEYLQMLDSGADYLHLDVIDGHFDPNITFGHPVVESPRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAIAGANQYTFHLETTENPGTLIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFG Q+ +E + K+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGRQKFMEDMMQKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ +AG +++V GS+
Sbjct: 179 GLDTVYKCAEAGVNMIVSGSA 199
>gi|291558242|emb|CBL35359.1| ribulose-phosphate 3-epimerase [Eubacterium siraeum V10Sc8a]
Length = 215
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 119/220 (54%), Gaps = 13/220 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I S+LA+D + + +EI A + +H DVMDG FV NI++G +V+ ++R SD FD
Sbjct: 5 ISASMLASDLTNIEKEIRRTENAQVEWLHIDVMDGVFVDNITYGNNVVAAMRKVSDIYFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ I + A AG +++T H ES+ + +LR I G G+AI P T +
Sbjct: 65 THLMVTDPTKLIPLFAKAGSNMLTIHLESNGNTEENLRAIRENGMNAGLAIKPATDWKEV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+ DM+L+MTV PG+GGQ I K+ + G ++++VDGG+ +
Sbjct: 125 IPYLPLCDMVLVMTVEPGYGGQGFIPQCADKVAMLRKYCDENGFDKMNIQVDGGINTATA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++ AGA++LV G+ F R D+K +A AI
Sbjct: 185 ATVKDAGANVLVAGTYLF----------RAEDMKTAADAI 214
>gi|145594415|ref|YP_001158712.1| ribulose-phosphate 3-epimerase [Salinispora tropica CNB-440]
gi|145303752|gb|ABP54334.1| ribulose-5-phosphate 3-epimerase [Salinispora tropica CNB-440]
Length = 226
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 123/223 (55%), Gaps = 4/223 (1%)
Query: 1 MTPSIQIV-PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT + IV PSILAADF+ L +E+ I A +H DVMD FVPN++ G V++SLR+
Sbjct: 1 MTVPLPIVAPSILAADFACLADEVRAIEDT-ADWVHVDVMDNHFVPNLTIGLPVVQSLRA 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ FD HLMI ADAG +TFH E+ + + + G K G+AI+
Sbjct: 60 ATRLPFDVHLMIEDPRRWAPGYADAGAYNVTFHAEACDDPVALAKDLRSAGAKAGLAIDR 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
+TP+ D++ D +LIMT+ GFGGQ+ I + + K+R A+ + G + +EVDGG
Sbjct: 120 DTPIEPYLDLLPSFDTLLIMTIKAGFGGQRFIPNLLDKVRTARRHVDAGHLELRIEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I +AGAD V G++ F +RL L +SA
Sbjct: 180 IALNTIAEAAEAGADAFVAGTAVFGADDPAEAVRRLRSLAQSA 222
>gi|215489436|ref|YP_002331867.1| allulose-6-phosphate 3-epimerase [Escherichia coli O127:H6 str.
E2348/69]
gi|312965703|ref|ZP_07779932.1| ribulose-phosphate 3-epimerase [Escherichia coli 2362-75]
gi|215267508|emb|CAS11962.1| allulose-6-phosphate 3-epimerase [Escherichia coli O127:H6 str.
E2348/69]
gi|312289677|gb|EFR17568.1| ribulose-phosphate 3-epimerase [Escherichia coli 2362-75]
Length = 231
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFIDN-HADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 DAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQV 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|148667822|gb|EDL00239.1| ribulose-5-phosphate-3-epimerase, isoform CRA_e [Mus musculus]
gi|187466000|emb|CAQ52186.1| ribulose-5-phosphate-3-epimerase [Mus musculus]
Length = 235
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 115/210 (54%), Gaps = 15/210 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGC---------FVPNISFGA 51
M +I PSIL +D + LG E + +GA +H D C FVPNI+FG
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDA--PCSSGRSVFLHFVPNITFGH 58
Query: 52 DVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
V+ SLR D FD H+M+S + + +A AG + TFH E++ + ++ I
Sbjct: 59 PVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIREN 118
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + +
Sbjct: 119 GMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PT 176
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ +EVDGGV ++ +AGA+++V GS+
Sbjct: 177 LDIEVDGGVGPDTVQKCAEAGANMIVSGSA 206
>gi|116874026|ref|YP_850807.1| ribulose-phosphate 3-epimerase family protein [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116742904|emb|CAK22028.1| ribulose-phosphate 3-epimerase family protein [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 224
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGDELRRLETAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVADDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +DE++M+L+MTVNPGF GQ+ + K+ KA L GK + L EVDG + +
Sbjct: 123 IYPYLDEVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHVPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHNRDQTSYAERL 213
>gi|262202279|ref|YP_003273487.1| ribulose-phosphate 3-epimerase [Gordonia bronchialis DSM 43247]
gi|262085626|gb|ACY21594.1| ribulose-phosphate 3-epimerase [Gordonia bronchialis DSM 43247]
Length = 229
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 4/197 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L E + + G+ +H DVMD FVPN++ G V+ SL +D D
Sbjct: 10 IAPSILSADFANLAAEAAAVE--GSDWLHVDVMDAHFVPNLTLGLPVVESLLKATDIPID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + + A+AG +TFH E++ R I A G K G++I P TP+
Sbjct: 68 CHLMIENPERWAPPYAEAGAHNVTFHAEATDDPIPVARDIRAAGAKAGLSIKPGTPLEPY 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIK 184
+++ D +LIM+V PGFGGQ+ I + K R + +I + L E+DGG+ + I+
Sbjct: 128 LEILTSFDTLLIMSVEPGFGGQKFIPDVLEKARTIRKIIDAEDLQLLVEIDGGINADTIE 187
Query: 185 SLVQAGADLLVVGSSFF 201
+AG D V GS+ +
Sbjct: 188 QAAEAGIDCFVAGSAVY 204
>gi|323950348|gb|EGB46229.1| ribulose-phosphate 3-epimerase [Escherichia coli H252]
Length = 231
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A G D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARVGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|313123241|ref|YP_004033500.1| ribulose-5-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279804|gb|ADQ60523.1| Ribulose-5-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 216
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 3 IAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDLTA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PH-IRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM +++ + AG D+I H E+ P+ I L + G G+ ++P+T +
Sbjct: 63 EVHLMSNNLPDLLPAFVKAGSDLIEIHYEADYPNRIDHWLDYLKENGVSCGLVLSPDTDI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+LE D++D +L+MTV PGFGGQ+ +E +I+ A+A++ + +EVDGG+ ++
Sbjct: 123 KVLERYKDKLDQVLLMTVYPGFGGQKFMEEAADRIKGARAIL--PDLPIEVDGGINAQTA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGAD+ V GS F G S AK++ +L
Sbjct: 181 EIAKEAGADVFVAGSYIF---GRDSVAKQVAEL 210
>gi|327538881|gb|EGF25522.1| ribulose-phosphate 3-epimerase [Rhodopirellula baltica WH47]
Length = 188
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 104/181 (57%), Gaps = 5/181 (2%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
MDG FVPN+++G ++ LR ++D D HLMIS ++ + DAG D++TFH E+
Sbjct: 1 MDGHFVPNLTYGMPIVEGLRRHTDMPLDVHLMISDPIAYAQPMVDAGADLLTFHVEAVDD 60
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
I MG GVAINP+T A L+ +D +DM+L+M+VN GFGGQQ + ++
Sbjct: 61 CVEVAGKIRDMGVGVGVAINPDTDFAKLDCCLDSVDMVLVMSVNAGFGGQQFNPVALDRL 120
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
R K K + LE+DGG+ + I AG DL VVGS+ F Q Y +N+L +
Sbjct: 121 RSLKER--KPDLLLEIDGGIKAETIGEARAAGCDLFVVGSAIFGQH---DYETAINELTQ 175
Query: 219 S 219
+
Sbjct: 176 A 176
>gi|325534035|pdb|3QC3|A Chain A, Crystal Structure Of A D-Ribulose-5-Phosphate-3-Epimerase
(Np_954699) From Homo Sapiens At 2.20 A Resolution
gi|325534036|pdb|3QC3|B Chain B, Crystal Structure Of A D-Ribulose-5-Phosphate-3-Epimerase
(Np_954699) From Homo Sapiens At 2.20 A Resolution
Length = 225
Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDS 63
+I PSIL +D + LG E +GA +H DV DG FVPNI+FG V+ SLR D
Sbjct: 7 KIGPSILNSDLANLGAECLRXLDSGADYLHLDVXDGHFVPNITFGHPVVESLRKQLGQDP 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H +S + + A AG + TFH E++ + ++ I G K G+AI P T V
Sbjct: 67 FFDXHXXVSKPEQWVKPXAVAGANQYTFHLEATENPGALIKDIRENGXKVGLAIKPGTSV 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
L ++ID L+ TV PGFGGQ+ E PK+ + S+ +EVDGGV +
Sbjct: 127 EYLAPWANQIDXALVXTVEPGFGGQKFXEDXXPKVHWLRTQF--PSLDIEVDGGVGPDTV 184
Query: 184 KSLVQAGADLLVVGSS 199
+AGA+ +V GS+
Sbjct: 185 HKCAEAGANXIVSGSA 200
>gi|170085067|ref|XP_001873757.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651309|gb|EDR15549.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 193
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 4/189 (2%)
Query: 36 FDVMDGCFVPNISFGADVIRSLRSYSDSVF-DCHLMISSIDSHINIIADAGCDIITFHPE 94
DVMDG FVPNI+ GA ++ + +F DCH+M++ + ++ IADAG + FH E
Sbjct: 1 LDVMDGHFVPNITMGAPILSCVHKGVPGIFMDCHMMVAKPEQWVDDIADAGGSLYCFHIE 60
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETP-VAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
++ + TIH K GVAI+P+TP AI +++ + DM+L+MTV PG GGQ+ IE
Sbjct: 61 ATSDPVSLINTIHKRNMKAGVAISPDTPSTAITDEIANAADMLLVMTVYPGRGGQKFIER 120
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+PK+ + +A ++ I EVDGGV I AG +++V G++ F + + +RL
Sbjct: 121 CVPKVAELRARFPEKDI--EVDGGVGPNTIGICADAGCNVIVAGTAIFGSENPMEVIQRL 178
Query: 214 NDLKKSALA 222
D +A A
Sbjct: 179 KDTVNAAQA 187
>gi|217965415|ref|YP_002351093.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes HCC23]
gi|217334685|gb|ACK40479.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes HCC23]
gi|307570029|emb|CAR83208.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes L99]
Length = 222
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 126/215 (58%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + ++ I A+G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRALGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLEKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKAG-SYTEKLAPLRE 217
>gi|289524258|ref|ZP_06441112.1| ribulose-phosphate 3-epimerase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502914|gb|EFD24078.1| ribulose-phosphate 3-epimerase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 224
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 122/216 (56%), Gaps = 11/216 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
+ PS+L+A+ + +I I K +H DVMDG FVPN+++G +++ +LRS +
Sbjct: 6 LAPSLLSANPLDIAGDIEKI-KGQCDWLHIDVMDGHFVPNLAYGPNLVAALRSDENISLP 64
Query: 66 -DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ G D +T E++PH R L+ I G K G+A+NP TPV
Sbjct: 65 IDVHLMVEPPECFIDLFLPLGVDYLTVQIEATPHAHRVLQRIRDSGVKCGIALNPGTPVE 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS-----LEVDGGVT 179
+ ++ +DM+L+M+VNPGFGGQ+ I + K A L +R++ +E+DGG+
Sbjct: 125 WVAPLLPFLDMVLVMSVNPGFGGQKFIPQVLEK---AGWLYRERAVKNFNFLIEMDGGLG 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N+ + V+ G D++V G++ F K + D
Sbjct: 182 LENVHTAVRYGCDVIVAGNAVFGHSDPAFALKTMRD 217
>gi|150401926|ref|YP_001325692.1| ribulose-phosphate 3-epimerase [Methanococcus aeolicus Nankai-3]
gi|150014629|gb|ABR57080.1| Ribulose-phosphate 3-epimerase [Methanococcus aeolicus Nankai-3]
Length = 219
Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 124/218 (56%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SIL+AD+ L EEI + +AG IH D+MDG FVPN+S G + + + ++
Sbjct: 2 VKVGASILSADYGHLKEEIKKVEEAGVDFIHIDMMDGHFVPNLSMGIGISKYVSEITNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +A+ D+I+FH E+ R +R + G K +A+NP TP+
Sbjct: 62 IDVHLMVEHPEKFSLALAEE-ADMISFHIEACKFPFRMVRLLKESGVKPIIALNPSTPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+E ++D + IL+MTV PGF GQ + + KI + K I E VDGG+ ++
Sbjct: 121 TVEYILDYVHGILVMTVEPGFSGQSFMNPMLKKIDKLKTTILAEGYDTEIYVDGGINAKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ +NQ+ ++ A +L LK+SA
Sbjct: 181 APKAVEAGADCLIAASAIYNQE-DVGGAVKL--LKESA 215
>gi|290894371|ref|ZP_06557335.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|290556078|gb|EFD89628.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
Length = 222
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + ++ I +G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRELGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKAG-SYTEKLAPLRE 217
>gi|28572565|ref|NP_789345.1| D-ribulose-5-phosphate 3-epimerase [Tropheryma whipplei TW08/27]
gi|28410697|emb|CAD67083.1| D-ribulose-5-phosphate 3-epimerase [Tropheryma whipplei TW08/27]
Length = 219
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 118/217 (54%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF L ++ I+ A +H DVMDG FVPNI+FG V++ + S
Sbjct: 3 IRISPSILSADFCNLERDLQLIS--SADMVHVDVMDGHFVPNITFGLPVVKRICEVSPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D AD G +TFH E++ + R I + K G+A++P+T +
Sbjct: 61 LDVHLMVENPDYWALQYADLGVYSVTFHFEAAKDPIATARNIRSNKSKVGLAVSPDTDIG 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-RQAKALIGKRSISLEVDGGVTSRNI 183
V+ E+DM+ +MTV PGFGGQ+LI + K R ++ ++S VDGGVT NI
Sbjct: 121 ECVHVLPEVDMLQVMTVYPGFGGQKLIRRVLDKFSRITRSEF--ENLSFSVDGGVTLGNI 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ G D V GSS F + + L L K A
Sbjct: 179 SEIASVGVDTFVAGSSVFLSQLPADSVESLRKLAKVA 215
>gi|159905935|ref|YP_001549597.1| ribulose-phosphate 3-epimerase [Methanococcus maripaludis C6]
gi|159887428|gb|ABX02365.1| Ribulose-phosphate 3-epimerase [Methanococcus maripaludis C6]
Length = 219
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + +E+ + H D+MDG FVPN+S G V L+S +D
Sbjct: 2 VMIGASILSADYGHMEQEVKKAEEGNVDFFHVDIMDGHFVPNLSMGLRVPHYLKSITDVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I +ADA D+I FH ESS ++ R++ I K VA+NP TP+
Sbjct: 62 IDVHLMVENPDLFIPKLADA-ADMIAFHAESSKYLFRTVDMIKEHDAKPIVALNPSTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV--DGGVTSRN 182
+E V++ + +LIMTV PGF GQ I + KI K I ++ DGG+
Sbjct: 121 NVEYVLENLYGVLIMTVEPGFSGQSFINPMLKKIDNLKNKILAEGYDTKIFADGGINLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ + G+ K ++DL+ SA
Sbjct: 181 APKAVEAGADALIAASAIY---GKEDVKKAVDDLRNSA 215
>gi|302866837|ref|YP_003835474.1| ribulose-phosphate 3-epimerase [Micromonospora aurantiaca ATCC
27029]
gi|315503252|ref|YP_004082139.1| ribulose-phosphate 3-epimerase [Micromonospora sp. L5]
gi|302569696|gb|ADL45898.1| ribulose-phosphate 3-epimerase [Micromonospora aurantiaca ATCC
27029]
gi|315409871|gb|ADU07988.1| ribulose-phosphate 3-epimerase [Micromonospora sp. L5]
Length = 226
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 3/221 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + PSILAADF+RL +E+ + A A +H DVMD FVPN++ G V++SLR+ +
Sbjct: 4 PPPIVAPSILAADFARLADEVRAVEPA-ADWLHVDVMDNHFVPNLTIGLPVVQSLRAVTG 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI+ ADAG +TFH E+ + + + G K G+AI+ +TP
Sbjct: 63 IPFDVHLMITDPRRWAPGYADAGAYNVTFHAEACDDPVALAKDLRSAGAKAGLAIDRDTP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ +++ D +LIMT+ GFGGQ+ + + K+R A+ + G + +EVDGG+ +
Sbjct: 123 IEPYLELLPSFDTLLIMTIKAGFGGQRFLPQLLDKVRAARRHVDSGHLELRIEVDGGIAA 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I+ AGAD V G++ + +RL L + A+
Sbjct: 183 DTIEQAAAAGADAFVAGTAVYGADDPAEAVRRLRGLAERAM 223
>gi|28493324|ref|NP_787485.1| ribulose-phosphate 3-epimerase [Tropheryma whipplei str. Twist]
gi|28476365|gb|AAO44454.1| ribulose-phosphate 3-epimerase [Tropheryma whipplei str. Twist]
Length = 219
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 118/217 (54%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF L ++ I+ A +H DVMDG FVPNI+FG V++ + S
Sbjct: 3 IRISPSILSADFCNLERDLQLIS--SADMVHVDVMDGHFVPNITFGLPVVKRICEVSPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D AD G +TFH E++ + R I + K G+A++P+T +
Sbjct: 61 LDVHLMVENPDYWALQYADLGVYSVTFHFEAAKDPIATARNIRSNKSKVGLAVSPDTDIG 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-RQAKALIGKRSISLEVDGGVTSRNI 183
V+ E+DM+ +MTV PGFGGQ+LI + K R ++ ++S VDGGVT NI
Sbjct: 121 ECVHVLPEVDMLQVMTVYPGFGGQKLIRRVLDKFSRITRSEF--ENLSFSVDGGVTLGNI 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ G D V GSS F + + L L K A
Sbjct: 179 SEIASVGVDTFVAGSSVFLSQLPADSVESLRKLAKVA 215
>gi|217073160|gb|ACJ84939.1| unknown [Medicago truncatula]
Length = 201
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 95/144 (65%), Gaps = 2/144 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 58 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP 117
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D + AG DI++ H E S H+ R++ + ++G K GV +NP TP
Sbjct: 118 LDVHLMIVEPDQRVPDFIKAGADIVSIHCEQSSTIHLHRAINQVKSLGAKAGVVLNPGTP 177
Query: 123 VAILEDVIDEIDMILIMTVNPGFG 146
++ +E V+D +D++LIM+VNPGFG
Sbjct: 178 LSAIEYVLDVVDLVLIMSVNPGFG 201
>gi|197248486|ref|YP_002149238.1| allulose-6-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212189|gb|ACH49586.1| D-allulose-6-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 226
Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 15/222 (6%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNIT-KAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M S I PS++ D RL E++S + K G H D+MDG +VPN++ + ++
Sbjct: 1 MMKSPLIAPSLMCMDLLRLEEQVSFLNDKIG--YFHVDIMDGHYVPNLTLSPFFVSQMKR 58
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAIN 118
+ + DCHLM+++ +I+ +ADAG +++FH E++ R + I + G K G+ +N
Sbjct: 59 VASAPIDCHLMVTNPQDYISTLADAGASMVSFHAETANGQAFRLIDNIRSAGMKCGLVVN 118
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI------RQAKALIGKRSISL 172
PET + I+ +D +D + IMTV+PGF GQ I + + KI RQ L +
Sbjct: 119 PETQLDIVTLYLDRVDKVTIMTVDPGFAGQAFISAMLKKIAAFAEYRQQHQL----EFLI 174
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
EVDG +LV+AGAD+L+VGSS F +I A ++
Sbjct: 175 EVDGSCNKNTYSALVEAGADVLIVGSSGLFGHSEDIGEAWQI 216
>gi|237785570|ref|YP_002906275.1| ribulose-phosphate 3-epimerase [Corynebacterium kroppenstedtii DSM
44385]
gi|237758482|gb|ACR17732.1| ribulose-phosphate 3-epimerase [Corynebacterium kroppenstedtii DSM
44385]
Length = 259
Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 130/231 (56%), Gaps = 22/231 (9%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L ++ ++ A IH DVMDG FVPN+SFG + +++ + D
Sbjct: 19 IAPSILSADFAHLARDLDAVSHA--DWIHVDVMDGHFVPNLSFGLPIAQAVARETQLPLD 76
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINPETPV 123
CHLMI + A+ +TFH E+ I ++ RT+ A G + G++I P+TPV
Sbjct: 77 CHLMIDDPERWAPDYAEFYS--VTFHAEAVDDIDAAIALARTLRAAGTRAGISIKPKTPV 134
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR----QAKALIGKRSIS-------- 171
+ ++E DM+LIM+V PGFGGQ+ + + K+R +A + GK +
Sbjct: 135 DEVLAHLEEFDMVLIMSVKPGFGGQKFMPEVLDKVRALRERADQIWGKETDDDSADGRCL 194
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+E+DGG+++ I S +AG D+ V GS+ + S +++L+++A A
Sbjct: 195 IEIDGGISADTIASAAEAGVDVFVAGSAVYQAD---SPNAAIDELRENARA 242
>gi|191168775|ref|ZP_03030552.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli B7A]
gi|193063106|ref|ZP_03044198.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli E22]
gi|194426732|ref|ZP_03059285.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli B171]
gi|260846880|ref|YP_003224658.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli O103:H2 str.
12009]
gi|190901202|gb|EDV60974.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli B7A]
gi|192931365|gb|EDV83967.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli E22]
gi|194415068|gb|EDX31337.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli B171]
gi|257762027|dbj|BAI33524.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli O103:H2 str.
12009]
Length = 231
Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRCHDMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|312076830|ref|XP_003141036.1| rpe protein [Loa loa]
gi|307763800|gb|EFO23034.1| rpe protein [Loa loa]
Length = 228
Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 8/220 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDSV 64
I PSIL +D S L E+ + GA +H DVMDG FVPN++FG VI LR +
Sbjct: 11 ICPSILNSDLSNLAEDCRRLLHYGADYLHLDVMDGHFVPNLTFGHPVIDCLRRNLGPEPF 70
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFH---PESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD H+M+ + + + + AG FH ES + + I G K GVAI P T
Sbjct: 71 FDVHMMVLNPERWVEPMKKAGASQFVFHLEAMESDKSCQMLIDRIKHFGMKVGVAIKPCT 130
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P+ +E ++D +DM+L+MTV PGFGGQ+ + + + K+R ++ ++++VDGGVT
Sbjct: 131 PIEKIETLVD-MDMVLVMTVEPGFGGQKFMSNMMEKVRILRS--THPFLNIQVDGGVTLD 187
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
N++ +AGA+++V G+ + + + +AL
Sbjct: 188 NVEVCAKAGANVIVSGTGILKAPNPATAIAEMREKVSAAL 227
>gi|283787065|ref|YP_003366930.1| D-allulose-6-phosphate 3-epimerase [Citrobacter rodentium ICC168]
gi|282950519|emb|CBG90184.1| D-allulose-6-phosphate 3-epimerase [Citrobacter rodentium ICC168]
Length = 231
Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 5/210 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASIP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I+ +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYISQLAQAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + KI + K + +EVDG
Sbjct: 120 ETMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKIAELKRWREREGWQYEIEVDGSCNQL 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYA 210
+ L+ AGAD+ +VG+S FN +I A
Sbjct: 180 TYQQLMAAGADVFIVGTSGLFNHAADIDKA 209
>gi|188495855|ref|ZP_03003125.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli 53638]
gi|194437192|ref|ZP_03069290.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli 101-1]
gi|188491054|gb|EDU66157.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli 53638]
gi|194423748|gb|EDX39737.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli 101-1]
Length = 242
Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 11 NMKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATK 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETP
Sbjct: 70 PLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
V ++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 130 VEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQ 189
Query: 181 RNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 190 ATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 223
>gi|307106707|gb|EFN54952.1| hypothetical protein CHLNCDRAFT_134711 [Chlorella variabilis]
Length = 781
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 122/210 (58%), Gaps = 17/210 (8%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
+ PSIL+ADFS L +++ + AGA+ +H D+ DG FVPN++ G V++SL +S +
Sbjct: 552 VSPSILSADFSSLARDVARVVAAGAEWVHVDIFDGVFVPNLTIGPPVVKSLHKSVPQAFL 611
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSP-----HIRRSL-RTIHAMGKKTGVAINP 119
DCHL + ++++ +A AGC TFH E+ H +L R +G G+A+ P
Sbjct: 612 DCHLCVVHPENYVEDLAAAGCAQFTFHIEAPGIDFCCHTAAALCRRARGLGMLAGIALTP 671
Query: 120 ET-PVAILE-DVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEV 174
ET P A+ E+D +L+++V GFGGQ+ +PK+ R+A + I++ V
Sbjct: 672 ETAPDAVFPLCAAGEVDTVLLLSVRAGFGGQKFQPGVLPKVAALRRAFPV-----INIIV 726
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
DGG+T N S+ +AGA+ LV G++ F K
Sbjct: 727 DGGITLDNAGSVARAGANALVAGTTVFAGK 756
>gi|126272981|ref|XP_001367469.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase [Monodelphis
domestica]
Length = 225
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 114/206 (55%), Gaps = 7/206 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I SIL++D + LG E + + +G +H DVMDG VPNI+FG V+ SLR
Sbjct: 1 MASGCKIGLSILSSDLACLGAECTRMLDSGTNYLHLDVMDGHCVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A A + TFH E++ + +R G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAIAEANQYTFHLEATENPGALIRE---NGMKVGLAIK 117
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E + K+ + S+ +EVDGGV
Sbjct: 118 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMLKVHWLRTQF--PSLDIEVDGGV 175
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
I +AGA+++V GS+ K
Sbjct: 176 GPDTIHKCAEAGANMIVSGSAIMRSK 201
>gi|290891847|ref|ZP_06554844.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|290558441|gb|EFD91958.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
Length = 224
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ I K+ KA L GK L EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVIQKLHDLKAKLAGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|170679730|ref|YP_001746479.1| allulose-6-phosphate 3-epimerase [Escherichia coli SMS-3-5]
gi|170517448|gb|ACB15626.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli SMS-3-5]
Length = 231
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|150015419|ref|YP_001307673.1| ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
gi|149901884|gb|ABR32717.1| Ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
Length = 235
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS++ AD L + I I K G IH D++DG F P++ G D ++SLR +D
Sbjct: 6 IIISPSVMCADLCNLEKSIREIEKEGIDTIHIDLIDGYFSPSMPLGIDTVKSLRKITDMN 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M ++ + I + G I+FH ESS HI R + I G K G+A+NP T ++
Sbjct: 66 FDVHIMSNNNEFFIQEMIKIGVSQISFHYESSTHIDRYINLIKKNGIKAGLALNPSTSLS 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTI---PKIRQAKALIGKRSIS--LEVDGGVT 179
+LE + + D I++M +NPGF + + I K++ LI ++ +EVDG V+
Sbjct: 126 VLEYCLPQCDTIMLMLINPGFATDKNEKQVIYAEKKVKDLYKLIKGNGLNTKIEVDGRVS 185
Query: 180 SRNIKSLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKKSAL 221
I LV+AGAD+LV GS S F I+ K L ++KS L
Sbjct: 186 LDTIPGLVKAGADMLVAGSTSLFIPNQSIAENKAL--MEKSIL 226
>gi|170718710|ref|YP_001783901.1| allulose-6-phosphate 3-epimerase [Haemophilus somnus 2336]
gi|168826839|gb|ACA32210.1| Ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
Length = 228
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 117/208 (56%), Gaps = 5/208 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS++ D ++ E+I + + A H D+MDG +VPN++ + ++ + D
Sbjct: 5 ISPSLMCMDLTKFKEQIEFLDQKVA-YFHIDIMDGHYVPNLTLSPFFVSQVKKLATKPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
CHLM+++ +++I+ +A AGCD+IT H E+ S R + I + K G+ NPETP+
Sbjct: 64 CHLMVTNPENYIDDLAKAGCDMITLHVETISGQAFRLIEKIRYLEMKVGIIFNPETPIEK 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNI 183
+ + + D + I+TV+PGF GQ I + K+ + K + + +E+DG +
Sbjct: 124 AKYYLSKADKVTILTVDPGFAGQSFIPEMLEKVAELKLFRETHQLNYEIEIDGSCNPKTY 183
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYA 210
+ L++AGAD+L+VGSS FN I A
Sbjct: 184 EMLIKAGADVLIVGSSGLFNNSDNIVEA 211
>gi|260578783|ref|ZP_05846690.1| ribulose-phosphate 3-epimerase [Corynebacterium jeikeium ATCC
43734]
gi|258603081|gb|EEW16351.1| ribulose-phosphate 3-epimerase [Corynebacterium jeikeium ATCC
43734]
Length = 222
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 11/219 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L +E++ + A +H DVMD FVPN+SFG V +SL ++D D
Sbjct: 9 IAPSILAADFANLAQEVARVPNA--DWLHIDVMDNHFVPNLSFGLPVAKSLLPHTDKHLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR---TIHAMGKKTGVAINPETPV 123
HLMI + + AD +TFH E+ + ++ + G G++I P TPV
Sbjct: 67 VHLMIETPEKWAEDYAD-DFQSVTFHLEAVADVDTAIALADKLRGHGTMAGISIKPNTPV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L D +D D++L+M+V PGFGGQ+ + + K+R+ ++ I + +E+DGG+ S
Sbjct: 126 EPLLDHLDRFDLVLVMSVEPGFGGQKFMPEVLDKVRKLRSRIDADGLDTLIEIDGGIGSE 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AG D+ V GSS F G+ A +++++ SA
Sbjct: 186 TAAESAAAGVDVFVAGSSVF---GKEDPAAAVDEIRASA 221
>gi|209921574|ref|YP_002295658.1| allulose-6-phosphate 3-epimerase [Escherichia coli SE11]
gi|209914833|dbj|BAG79907.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli SE11]
Length = 231
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|217966140|ref|YP_002351818.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes HCC23]
gi|217335410|gb|ACK41204.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes HCC23]
gi|307572250|emb|CAR85429.1| ribulose-phosphate 3-epimerase, putative [Listeria monocytogenes
L99]
Length = 224
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA L GK L EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 SLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|16131911|ref|NP_418509.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|89110807|ref|AP_004587.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. W3110]
gi|170021915|ref|YP_001726869.1| allulose-6-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|170083539|ref|YP_001732859.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|218702751|ref|YP_002410380.1| allulose-6-phosphate 3-epimerase [Escherichia coli IAI39]
gi|238903195|ref|YP_002928991.1| allulose-6-phosphate 3-epimerase [Escherichia coli BW2952]
gi|253775285|ref|YP_003038116.1| allulose-6-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254037096|ref|ZP_04871173.1| D-allulose-6-phosphate 3-epimerase [Escherichia sp. 1_1_43]
gi|254164020|ref|YP_003047128.1| allulose-6-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|256024961|ref|ZP_05438826.1| allulose-6-phosphate 3-epimerase [Escherichia sp. 4_1_40B]
gi|297519446|ref|ZP_06937832.1| allulose-6-phosphate 3-epimerase [Escherichia coli OP50]
gi|301019251|ref|ZP_07183445.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|307140778|ref|ZP_07500134.1| allulose-6-phosphate 3-epimerase [Escherichia coli H736]
gi|331644833|ref|ZP_08345950.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli H736]
gi|418563|sp|P32719|ALSE_ECOLI RecName: Full=D-allulose-6-phosphate 3-epimerase
gi|197305058|pdb|3CT7|A Chain A, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305059|pdb|3CT7|B Chain B, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305060|pdb|3CT7|C Chain C, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305061|pdb|3CT7|D Chain D, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305062|pdb|3CT7|E Chain E, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305063|pdb|3CT7|F Chain F, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|224036306|pdb|3CTL|A Chain A, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036307|pdb|3CTL|B Chain B, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036308|pdb|3CTL|C Chain C, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036309|pdb|3CTL|D Chain D, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036310|pdb|3CTL|E Chain E, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036311|pdb|3CTL|F Chain F, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|396420|gb|AAC43179.1| ORF_f231 [Escherichia coli str. K-12 substr. MG1655]
gi|1790523|gb|AAC77046.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|85676838|dbj|BAE78088.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K12 substr.
W3110]
gi|169756843|gb|ACA79542.1| Ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|169891374|gb|ACB05081.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|218372737|emb|CAR20614.1| allulose-6-phosphate 3-epimerase [Escherichia coli IAI39]
gi|226840202|gb|EEH72204.1| D-allulose-6-phosphate 3-epimerase [Escherichia sp. 1_1_43]
gi|238859965|gb|ACR61963.1| allulose-6-phosphate 3-epimerase [Escherichia coli BW2952]
gi|242379612|emb|CAQ34434.1| allulose-6-phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|253326329|gb|ACT30931.1| Ribulose-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975921|gb|ACT41592.1| allulose-6-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|253980077|gb|ACT45747.1| allulose-6-phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|260451084|gb|ACX41506.1| Ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|299882300|gb|EFI90511.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|309704554|emb|CBJ03903.1| allulose-6-phosphate 3-epimerase [Escherichia coli ETEC H10407]
gi|315138641|dbj|BAJ45800.1| allulose-6-phosphate 3-epimerase [Escherichia coli DH1]
gi|323380526|gb|ADX52794.1| Ribulose-phosphate 3-epimerase [Escherichia coli KO11]
gi|331035808|gb|EGI08046.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli H736]
gi|332346093|gb|AEE59427.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 231
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L+ AGAD+ +VG+S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|313624980|gb|EFR94879.1| ribulose-phosphate 3-epimerase family protein [Listeria innocua FSL
J1-023]
Length = 222
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDILLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + ++ I +G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRELGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKTG-SYTEKLAPLRE 217
>gi|238791613|ref|ZP_04635251.1| D-allulose-6-phosphate 3-epimerase [Yersinia intermedia ATCC 29909]
gi|238729229|gb|EEQ20745.1| D-allulose-6-phosphate 3-epimerase [Yersinia intermedia ATCC 29909]
Length = 219
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ ++ DCHLM++
Sbjct: 2 DLLKFKEQIEFIDQ-NADYFHIDIMDGHFVPNLTLSPFFVSQVKRIANKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I ++G K G+ +NPET V ++ I +
Sbjct: 61 QDYIAPLAKAGADFITLHPETLNGQAFRLIEEIRSLGMKVGLILNPETSVDSMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF GQ I + KI + KA K ++ +E+DG + L++AGA
Sbjct: 121 DKITVMTVDPGFAGQPFIPEMLDKIAELKAWREKNQLNYEIEIDGSCNQATYQLLIEAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+L+VGSS FN +I A L
Sbjct: 181 DVLIVGSSGLFNHASDIDKAWAL 203
>gi|227878878|ref|ZP_03996783.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus JV-V01]
gi|256849786|ref|ZP_05555217.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus MV-1A-US]
gi|262046515|ref|ZP_06019476.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus MV-3A-US]
gi|293380316|ref|ZP_06626390.1| putative ribulose-phosphate 3-epimerase [Lactobacillus crispatus
214-1]
gi|295693188|ref|YP_003601798.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus ST1]
gi|227861512|gb|EEJ69126.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus JV-V01]
gi|256713275|gb|EEU28265.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus MV-1A-US]
gi|260572964|gb|EEX29523.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus MV-3A-US]
gi|290923131|gb|EFE00060.1| putative ribulose-phosphate 3-epimerase [Lactobacillus crispatus
214-1]
gi|295031294|emb|CBL50773.1| Ribulose-phosphate 3-epimerase [Lactobacillus crispatus ST1]
Length = 216
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDS 63
+ I PSIL A+ L +I N +AG + H D+MDG FVPN+SFG +I+ R + +
Sbjct: 1 MMIAPSILNANNIDLKNDIENAVQAGISRFHIDIMDGHFVPNLSFGPQLIKDFKREFPMT 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM + D + AG D++ H E+ P + + + G +AI+P+T
Sbjct: 61 DAEIHLMSDAPDKLVPAFVSAGADLVELHYEAMDKPKLYYWFDYLASNGVDAALAISPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV ++E + + +L+MTV PGFGGQ + ++ +I+ + ++G +EVDGG+ +
Sbjct: 121 PVEVVEPYLPLLKQVLVMTVKPGFGGQSFLPESVSRIKSVREIVGS-DFDIEVDGGINDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEI 207
IK AGA++ VVGS + + G++
Sbjct: 180 TIKLAENAGANIFVVGSYLY-ENGDV 204
>gi|162447123|ref|YP_001620255.1| ribulose-phosphate 3-epimerase [Acholeplasma laidlawii PG-8A]
gi|161985230|gb|ABX80879.1| ribulose-phosphate 3-epimerase [Acholeplasma laidlawii PG-8A]
Length = 210
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 7/215 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL A+F RL +E+ +I + G+ IH DVMDG FVPNISFG ++ + +
Sbjct: 1 MKVAPSILTANFIRLEDELKSI-EEGSDYIHVDVMDGHFVPNISFGPAIVSQIGELTKLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ I+ + + IT H E + + S+R I +GKK G+AI P T V
Sbjct: 60 MDIHLMVEHPLDWIDKVIFPTTEFITIHAECN-RFKESIRRILYLGKKAGLAIKPSTDVD 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
++ + ++D++L+M V PG+GGQ I++ + KI + L + E VDGG+
Sbjct: 119 FIKPYLSQLDLVLVMGVEPGYGGQLFIQNQLKKIEELAQLKEENGYHYEIQVDGGINVST 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K + AGA ++V G+ FN + +R+ LK
Sbjct: 179 AKQVKDAGATIVVAGTFIFNYEDR---KERIESLK 210
>gi|308062812|gb|ADO04700.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Cuz20]
Length = 217
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 120/202 (59%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTKVSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ ++++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVELVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
I L QAG D++V GS F K
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSK 200
>gi|312984161|ref|ZP_07791507.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus CTV-05]
gi|310894380|gb|EFQ43456.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus CTV-05]
Length = 216
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDS 63
+ I PSIL A+ L +I N +AG + H D+MDG FVPN+SFG +I+ R + +
Sbjct: 1 MMIAPSILNANNIDLKNDIENAVQAGISRFHIDIMDGHFVPNLSFGPQLIKDFKREFPMT 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM + D + AG D++ H E+ P + + + G +AI+P+T
Sbjct: 61 DAEIHLMSDAPDKLVPAFVSAGADLVELHYEAMDKPKLYYWFDYLASNGVDAALAISPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV ++E + + +L+MTV PGFGGQ + ++ +I+ + ++G +EVDGG+ +
Sbjct: 121 PVEVVEPYLPLLKQVLVMTVKPGFGGQSFLPESVNRIKSVREIVGS-DFDIEVDGGINDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEI 207
IK AGA++ VVGS + + G++
Sbjct: 180 TIKLAENAGANIFVVGSYLY-ENGDV 204
>gi|313606414|gb|EFR83308.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes FSL F2-208]
Length = 226
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 5 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 65 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA L GK L EVDG + +
Sbjct: 125 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHAPLIEVDGNINKETV 184
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 185 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 215
>gi|256843392|ref|ZP_05548880.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus 125-2-CHN]
gi|256614812|gb|EEU20013.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus 125-2-CHN]
Length = 216
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 116/206 (56%), Gaps = 5/206 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDS 63
+ I PSIL A+ L +I N +AG + H D+MDG FVPN+SFG +I+ R + +
Sbjct: 1 MMIAPSILNANNIDLKNDIENAVQAGISRFHIDIMDGHFVPNLSFGPQLIKDFKREFPMT 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM + D + AG D++ H E+ P + + + G +AI+P+T
Sbjct: 61 DAEIHLMSDAPDKLVPAFVSAGADLVEIHYEAMDKPKLYYWFDYLASNGVDAALAISPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV ++E + + +L+MTV PGFGGQ + ++ +I+ + ++G +EVDGG+ +
Sbjct: 121 PVEVVEPYLPLLKQVLVMTVKPGFGGQSFLPESVSRIKSVREIVGS-DFDIEVDGGINDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEI 207
IK AGA++ VVGS + + G++
Sbjct: 180 TIKLAENAGANIFVVGSYLY-ENGDV 204
>gi|68536088|ref|YP_250793.1| ribulose-phosphate 3-epimerase [Corynebacterium jeikeium K411]
gi|68263687|emb|CAI37175.1| ribulose-phosphate 3-epimerase [Corynebacterium jeikeium K411]
Length = 222
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 122/219 (55%), Gaps = 11/219 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L +E++ + A +H DVMD FVPN+SFG V +SL ++D D
Sbjct: 9 IAPSILAADFANLAQEVARVPNA--DWLHIDVMDNHFVPNLSFGLPVAKSLLPHTDKHLD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR---TIHAMGKKTGVAINPETPV 123
HLMI + + AD +TFH E+ + ++ + G G++I P TPV
Sbjct: 67 VHLMIENPEKWAEDYAD-DFHSVTFHLEAVADVDTAIALADKLRGHGTMAGISIKPNTPV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L D +D D++L+M+V PGFGGQ+ + + K+R+ ++ I + +E+DGG+ +
Sbjct: 126 EPLLDHLDRFDLVLVMSVEPGFGGQKFMPEVLDKVRKLRSRIDADGLDTLIEIDGGIGAE 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AG D+ V GSS F G+ A +++++ SA
Sbjct: 186 TAAESAAAGVDVFVAGSSVF---GKPDPAAAVDEIRASA 221
>gi|159037488|ref|YP_001536741.1| ribulose-phosphate 3-epimerase [Salinispora arenicola CNS-205]
gi|157916323|gb|ABV97750.1| Ribulose-phosphate 3-epimerase [Salinispora arenicola CNS-205]
Length = 226
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 120/220 (54%), Gaps = 3/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + PSILAADF+ L +E+ + A +H DVMD FVPN++ G V++SLR+ +
Sbjct: 4 PPPIVAPSILAADFACLADEVRAVEDT-ADWLHVDVMDNHFVPNLTIGLPVVQSLRAATT 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI ADAG +TFH E+ + + + G K G+AI+ +TP
Sbjct: 63 LPFDVHLMIEDPRRWAPGYADAGAYNVTFHVEACDDPVALAKDLRSAGAKAGLAIDRDTP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ D++ D +LIMT+ GFGGQ+ I + + K+R A+ + G + +EVDGG+ +
Sbjct: 123 IEPYLDLLPSFDTLLIMTIKAGFGGQRFIPNLLDKVRTARRHVDAGHLEVRIEVDGGIAA 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGAD V G++ + +RL L + A
Sbjct: 183 DTIAEAAEAGADAFVAGTAVYGADDPAEAVRRLRSLARGA 222
>gi|254824978|ref|ZP_05229979.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|255521941|ref|ZP_05389178.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J1-175]
gi|293594217|gb|EFG01978.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
Length = 224
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELCRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA L GK L EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|46908840|ref|YP_015229.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47092283|ref|ZP_00230074.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 4b H7858]
gi|226225212|ref|YP_002759319.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes Clip81459]
gi|254852039|ref|ZP_05241387.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|254931070|ref|ZP_05264429.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|254992930|ref|ZP_05275120.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J2-064]
gi|300763582|ref|ZP_07073580.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|46882113|gb|AAT05406.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47019262|gb|EAL10004.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 4b H7858]
gi|225877674|emb|CAS06388.1| Putative ribulose-5-phosphate 3-epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605336|gb|EEW17944.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|293582614|gb|EFF94646.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|300515859|gb|EFK42908.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|328468144|gb|EGF39150.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes 1816]
gi|328469674|gb|EGF40599.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes 220]
gi|332313091|gb|EGJ26186.1| Ribulose-phosphate 3-epimerase [Listeria monocytogenes str. Scott
A]
Length = 224
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA L GK L EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|258575273|ref|XP_002541818.1| ribulose-phosphate 3-epimerase [Uncinocarpus reesii 1704]
gi|237902084|gb|EEP76485.1| ribulose-phosphate 3-epimerase [Uncinocarpus reesii 1704]
Length = 236
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 123/236 (52%), Gaps = 42/236 (17%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E SN+ KA + IH D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MAPPAIIAPSILSADFANLGAECSNLMKADSDWIHVDIMDGHFVPNITFGAPVVSKIRSH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFH------------PESSPHIR 100
FDCH+MI+ + +DAGCD+ FH P R
Sbjct: 61 VQKPASMGGKGTFDCHMMIAEPQKWVKDFSDAGCDLYCFHWEAAMTSTAAKEPADKETTR 120
Query: 101 RS-----LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
++ +R IH G + G+A+ P T V +L D+++ + I P F + S +
Sbjct: 121 KTSPKELIRYIHETGMQAGIALKPATSVDVLCDILENPEEI----ERPDF-----MASEL 171
Query: 156 PKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF--NQKGEI 207
PK++ + KR ++++EVDGG+ I AGA+++V GS+ F N E+
Sbjct: 172 PKVQALR----KRYPNMNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGANDPAEV 223
>gi|16799574|ref|NP_469842.1| hypothetical protein lin0499 [Listeria innocua Clip11262]
gi|16412939|emb|CAC95731.1| lin0499 [Listeria innocua Clip11262]
Length = 222
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVKNAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + ++ I +G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRELGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLEKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNDKAG-SYTEKLAPLRE 217
>gi|311070117|ref|YP_003975040.1| allulose-6-phosphate 3-epimerase [Bacillus atrophaeus 1942]
gi|310870634|gb|ADP34109.1| allulose-6-phosphate 3-epimerase [Bacillus atrophaeus 1942]
Length = 232
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 119/225 (52%), Gaps = 7/225 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q PS++ D ++ E+IS I + A H D+MDG FV NI+ I LR ++
Sbjct: 4 QFSPSLMCMDLTKFNEQIS-ILNSRADMYHVDIMDGHFVKNITLSPFFISQLRMMTNLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ A+AG D I+ H E+ + + R +R I G K G+ +NP TP+
Sbjct: 63 DAHLMVEKPEDFIDMTAEAGADYISVHAETINRNAFRLIRKIKDYGAKVGIVLNPATPLD 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRN 182
+ + ID + IMTV+PGF GQ I KIR AK + + +EVDG +
Sbjct: 123 WISPYVHLIDKLTIMTVDPGFAGQPFIAEMTEKIRDAKKIRETNHYTYVIEVDGSCNEKT 182
Query: 183 IKSLVQAGADLLVVGSSF---FNQKGEISYAKRLNDLKKSALAID 224
++L +AG D+ ++G+S ++ EI++ K N ++ D
Sbjct: 183 FRTLAEAGNDIFIIGNSGLFDLDENTEIAWDKMKNIFQQQTNTAD 227
>gi|281203212|gb|EFA77413.1| ribulose phosphate 3-epimerase [Polysphondylium pallidum PN500]
Length = 271
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 116/201 (57%), Gaps = 16/201 (7%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ DF+ L + + + + GA + HF VPN++ GA VI+SLR ++ D
Sbjct: 10 ICPSLLSGDFAFLARDANYMLEQGA-ECHF-------VPNLTIGAPVIKSLRKHTKGHLD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPH------IRRSLRTIHAMGKKTGVAINPE 120
CHLM+++ +S I+ +AG D ITFH E++ + + I + G G+++ P
Sbjct: 62 CHLMVTNPESMIDDFKNAGADGITFHIEATERGDGRSITKEVIHKIKSSGMMCGISVKPN 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + D ++ ID +LIMTV PGFGGQ + +PK+ + + ++VDGG+
Sbjct: 122 TPIESIFDFVESIDFVLIMTVEPGFGGQSFMTHMMPKVETLRK--KYPHLPIQVDGGLDP 179
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
I + +AGA+++V GSS F
Sbjct: 180 NTIDAAAKAGANIIVAGSSLF 200
>gi|152993732|ref|YP_001359453.1| ribulose-phosphate 3-epimerase [Sulfurovum sp. NBC37-1]
gi|151425593|dbj|BAF73096.1| ribulose-phosphate 3-epimerase [Sulfurovum sp. NBC37-1]
Length = 213
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 121/206 (58%), Gaps = 2/206 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF L ++ I + G +H DVMDG FVPN++ G V+ ++ + D
Sbjct: 3 VAPSILSADFGHLARDVKAICEGGCDLVHVDVMDGHFVPNLTIGPVVVEAVAKAATKPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A + I+FH E H R ++ I ++G + + +NP T +
Sbjct: 63 IHLMVENNSFFVDLFAPLKPEFISFHIEEEKHPHRLVQKIRSLGIRPSIVLNPHTLPEAV 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E +++++ M+L+M+VNPGFGGQ+ I S I K ++ K LI KR+ + +EVDGGV N+K
Sbjct: 123 EFLLEDLGMVLLMSVNPGFGGQKFIPSVIEKAQRLKTLIEKRNPNCLIEVDGGVNDVNVK 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYA 210
L AG D++V GS F + A
Sbjct: 183 ELAAAGVDVVVAGSYVFKHPNGVKEA 208
>gi|32307590|gb|AAP79200.1| ribulose-5-phosphate 3-epimerase [Bigelowiella natans]
Length = 136
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 92/133 (69%), Gaps = 1/133 (0%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFH 92
+HFDVMD +VPN++ G V ++LR + + D HLM+S +D I AG ITFH
Sbjct: 1 VHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFIAAGASYITFH 60
Query: 93 PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
PE+S H+ RSL+ I G K G+ NP TP+ ILE VID++D++L+M+VNPGFGGQ+ I
Sbjct: 61 PEASLHVDRSLQMIKDAGLKCGLVFNPATPLDILEYVIDKVDIVLLMSVNPGFGGQKFIP 120
Query: 153 STIPKIRQAKALI 165
+T+ K ++A+ALI
Sbjct: 121 NTLEKAKKARALI 133
>gi|325830780|ref|ZP_08164164.1| ribulose-phosphate 3-epimerase [Eggerthella sp. HGA1]
gi|325487187|gb|EGC89630.1| ribulose-phosphate 3-epimerase [Eggerthella sp. HGA1]
Length = 235
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++I PSIL+ADF LG +I I KAGA +H DVMDG FVPN++ G V++ L+
Sbjct: 1 MFEPVKIAPSILSADFMHLGRDIELIEKAGAGYVHVDVMDGHFVPNLTMGVPVVKQLKKA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAIN 118
+ D HLMI++ + DAG D +T H E+ + + R++ IHA G K V++
Sbjct: 61 TSLPLDVHLMIANPLEQLPWFLDAGADSVTVHAEALDADGLARAVAAIHAAGAKAAVSVK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST---IPKIRQAKALIGKRSISLEVD 175
P T V L V+ ++DM+L+M+V PGF GQ IE + + +I + +G + ++VD
Sbjct: 121 PRTAVGALAPVLADLDMVLVMSVEPGFSGQSYIEGSEAKVARIAEMARAVGASPL-IQVD 179
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFF 201
GG+ + AGAD+LV G++ F
Sbjct: 180 GGIGEVTAPIVAAAGADVLVCGNAVF 205
>gi|229544972|ref|ZP_04433697.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|256961103|ref|ZP_05565274.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|293384049|ref|ZP_06629943.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|293386863|ref|ZP_06631433.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|312908000|ref|ZP_07766983.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|312978472|ref|ZP_07790210.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
gi|229309864|gb|EEN75851.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|256951599|gb|EEU68231.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|291078529|gb|EFE15893.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|291083697|gb|EFE20660.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|310626091|gb|EFQ09374.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|311288621|gb|EFQ67177.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
Length = 222
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 121/219 (55%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+ ++ SRL + + + K +H DVMDG FVP+++ G +++ L+ +D + D
Sbjct: 6 LAPSLFSSKISRLEKTLETLEIEEIKWLHVDVMDGYFVPDMASGPSIVKELKEITDILLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + + + +AG D IT+H E++ + ++ + KK GVAINP TPV+++
Sbjct: 66 VHLMVETPEKIVPAFLEAGADSITYHAEATNNGMHIIQMVKEQKKKIGVAINPATPVSLI 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++ E+D++L+MT+NPG + I T+ KI + L +EVDG + + IK
Sbjct: 126 APILAEVDLVLVMTINPGRPNRDFIPLTVNKIAELSQLRESNDYHYLIEVDGKIDNETIK 185
Query: 185 SLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSALA 222
AG D+ V G F ++ E+ L K+ALA
Sbjct: 186 LCANAGTDMFVSGGYIFGEENKEVEMITNL----KTALA 220
>gi|300934516|ref|ZP_07149772.1| ribulose-phosphate 3-epimerase [Corynebacterium resistens DSM
45100]
Length = 223
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 109/202 (53%), Gaps = 8/202 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFSRLG E+ ++ A IH DVMDG FVPN+SFG V +S+ +D D
Sbjct: 7 IAPSILAADFSRLGHEVRTVSNA--DWIHIDVMDGHFVPNLSFGLPVAQSIVGLTDKHLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR---TIHAMGKKTGVAINPETPV 123
HLMI A D +TFH E+ + ++ T+ A G GVAI P T V
Sbjct: 65 VHLMIEDPARWAPGYA-LDFDSVTFHLEAVESVEAAVELAATLRAEGTLAGVAIKPGTSV 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L + + + D++L+M+V PGFGGQ+ + + K+R + I + +E+DGG+
Sbjct: 124 EPLLEHLSDFDIVLVMSVEPGFGGQKFMPEVLDKVRALRERIDSEGLHTIIEIDGGIGPE 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQ 203
AG D V GSS F +
Sbjct: 184 TASESAAAGVDAYVAGSSVFGK 205
>gi|257791098|ref|YP_003181704.1| ribulose-phosphate 3-epimerase [Eggerthella lenta DSM 2243]
gi|317488178|ref|ZP_07946750.1| ribulose-phosphate 3-epimerase [Eggerthella sp. 1_3_56FAA]
gi|257474995|gb|ACV55315.1| ribulose-phosphate 3-epimerase [Eggerthella lenta DSM 2243]
gi|316912723|gb|EFV34260.1| ribulose-phosphate 3-epimerase [Eggerthella sp. 1_3_56FAA]
Length = 235
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 121/206 (58%), Gaps = 6/206 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++I PSIL+ADF LG +I I KAGA +H DVMDG FVPN++ G V++ L+
Sbjct: 1 MFEPVKIAPSILSADFMHLGRDIELIEKAGAGYVHVDVMDGHFVPNLTMGVPVVKQLKKA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAIN 118
+ D HLMI++ + DAG D +T H E+ + + R++ IHA G K V++
Sbjct: 61 TSLPLDVHLMIANPLEQLPWFLDAGADSVTVHAEALDADGLARAVAAIHAAGAKAAVSVK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST---IPKIRQAKALIGKRSISLEVD 175
P T V L V+ ++DM+L+M+V PGF GQ IE + + +I + +G + ++VD
Sbjct: 121 PRTAVGALAPVLADLDMVLVMSVEPGFSGQSYIEGSEAKVTRITEMARAVGASPL-IQVD 179
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFF 201
GG+ + AGAD+LV G++ F
Sbjct: 180 GGIGEVTAPIVAAAGADVLVCGNAVF 205
>gi|254830906|ref|ZP_05235561.1| hypothetical protein Lmon1_06079 [Listeria monocytogenes 10403S]
Length = 224
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEIIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA L GK L EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKIHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|313899821|ref|ZP_07833324.1| D-allulose-6-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312955436|gb|EFR37101.1| D-allulose-6-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 233
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 113/195 (57%), Gaps = 6/195 (3%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D ++ E+I + A H D+MDG FV NI+ D ++++ S DCH
Sbjct: 7 PSLMCMDLLKIREQI-QVLNLHADFYHIDIMDGHFVKNITLSPDFVKAVARVSRVPLDCH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
LM++ D +I ++A AG ++ H E+ + R L IH +G +TG+ +NP TP++ +
Sbjct: 66 LMVTHPDDYITMLAQAGATFLSPHAETINTDAFRILHKIHELGCRTGIVLNPATPLSYIR 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNIK 184
+ +D I IM+V+PGF GQ I + KI++AKAL G R + +EVDG + +
Sbjct: 126 HYLHLLDKITIMSVDPGFAGQAFIREMLDKIKEAKALKLQHGYRYL-IEVDGSCNAATFQ 184
Query: 185 SLVQAGADLLVVGSS 199
L QAG ++ +VG+S
Sbjct: 185 ELRQAGVEVFIVGNS 199
>gi|255024349|ref|ZP_05296335.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J1-208]
Length = 224
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + ++ I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIQKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA L GK + L EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLEGKVHVPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|329298467|ref|ZP_08255803.1| allulose-6-phosphate 3-epimerase [Plautia stali symbiont]
Length = 226
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 5/208 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D +R E+I + A A H D+MDG +V NI+ I +LR +D D H
Sbjct: 7 PSLMCMDLTRFREQIEAM-NASASFYHVDIMDGSYVKNITLSPFFIENLRKITDVPIDLH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILE 127
LM++ + I + DAG DII+FHPE++ + R L I G++ GV +NP TP +
Sbjct: 66 LMVNHPEDIIPMCIDAGADIISFHPETANNKNFRLLTQIKEAGRRCGVVLNPATPADSIR 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKS 185
+ +D + +M+V+PGF GQ I T+ KIRQ A+ E+DG +R K
Sbjct: 126 EYAHLLDKVTVMSVDPGFAGQTFIPETLNKIRQLIAMRESHGYHYLTEIDGSCNARTFKQ 185
Query: 186 LVQAGADLLVVGSS-FFNQKGEISYAKR 212
+ +G D+ +VG+S FN +++ A +
Sbjct: 186 IAASGVDVFIVGTSGLFNLDDDVAQAWQ 213
>gi|260654220|ref|ZP_05859710.1| ribulose-phosphate 3-epimerase [Jonquetella anthropi E3_33 E1]
gi|260630853|gb|EEX49047.1| ribulose-phosphate 3-epimerase [Jonquetella anthropi E3_33 E1]
Length = 224
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 125/216 (57%), Gaps = 12/216 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVF 65
+ PS+L+AD L E + + A +H D+MDG +VPN+++G ++++LR Y D+
Sbjct: 6 LAPSLLSADPLALAESVEKLDGA-YDWLHVDIMDGHYVPNLTYGPSLVKALRKKYPDAWL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ +++ G +T H ES+ H+ R+L I G GV++NP TPV +
Sbjct: 65 DVHLMVEPSENFLDMFLPCGASCLTVHQESTRHLHRALTRIRENGIWAGVSLNPGTPVCM 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIES------TIPKIRQAKALIGKRSISLEVDGGVT 179
+E V+D +D++L+M+VNPGFGGQ I S T+ + R AK L + +E+DGG+
Sbjct: 125 VEPVLDCLDLVLLMSVNPGFGGQSFIPSVCSKAQTLCQWRAAKNL----NFVIEMDGGLG 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + AG D V+G++ FN A+ + +
Sbjct: 181 KDTLVQALTAGVDAAVMGNALFNTPAPAQTAREMRE 216
>gi|293569448|ref|ZP_06680741.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1071]
gi|291587842|gb|EFF19697.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1071]
Length = 219
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 3/203 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + ++I + A H DVMDG FVPN D ++ +R ++ D H
Sbjct: 6 PSLMCTDLGNVEQDIKELDNAAVDFYHIDVMDGVFVPNFGLNIDFVKRVREITEKPLDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM++ +I+ A+AG D+I+ H E++ +++ L I A G K GVAINP T + +LE
Sbjct: 66 LMVTDPSRYIDTFAEAGADMISIHAEATTNLQGDLARIQAHGLKAGVAINPATSLDVLEY 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNIKSL 186
V D D +++MTVNPGF GQ+ I + KI++ I KR + +E VDG + I
Sbjct: 126 VYDVTDYVVVMTVNPGFAGQKFIPAIYDKIQELSDQIKKRGLKIEIQVDGNIGENTIPKC 185
Query: 187 VQAGADLLVVGSS-FFNQKGEIS 208
GA + + GSS +N G +
Sbjct: 186 KDNGATMYIGGSSAVYNSAGTLE 208
>gi|294623447|ref|ZP_06702301.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
gi|291597142|gb|EFF28339.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
Length = 219
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 3/203 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + ++I + A H DVMDG FVPN D ++ +R ++ D H
Sbjct: 6 PSLMCTDLGNVEQDIKELDNAAVDFYHIDVMDGVFVPNFGLNLDFVKRVREITEKPLDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM++ +I+ A+AG D+I+ H E++ +++ L I A G K GVAINP T + +LE
Sbjct: 66 LMVTDPSRYIDTFAEAGADMISIHAEATTNLQGDLARIQAHGLKAGVAINPATSLDVLEY 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNIKSL 186
V D D +++MTVNPGF GQ+ I + KI++ I KR + +E VDG + I
Sbjct: 126 VYDVTDYVVVMTVNPGFAGQKFIPAIYDKIQELSDQIKKRRLKIEIQVDGNIGENTIPKC 185
Query: 187 VQAGADLLVVGSS-FFNQKGEIS 208
GA + + GSS +N G +
Sbjct: 186 KDNGATMYIGGSSAVYNSAGTLE 208
>gi|167747256|ref|ZP_02419383.1| hypothetical protein ANACAC_01970 [Anaerostipes caccae DSM 14662]
gi|317471001|ref|ZP_07930378.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
gi|167653234|gb|EDR97363.1| hypothetical protein ANACAC_01970 [Anaerostipes caccae DSM 14662]
gi|316901512|gb|EFV23449.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 224
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 113/193 (58%), Gaps = 4/193 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S++ DF ++GE++ NI H D+MDG + NI+ D+++S + S D HL
Sbjct: 8 SLMCMDFLKVGEQL-NILNDWVGMYHVDIMDGHYCKNITLSPDLVKSFKKVSKLPLDVHL 66
Query: 70 MISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M ++ + I+ +A+AG DII+ H E+ + R I +G K G+ +NP TP++
Sbjct: 67 MTTNPEDWIDPVAEAGADIISLHAETINGQAFRLYNRIEELGLKAGLVLNPATPLSEAAH 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSL 186
++ ID++ IMTV+ GF GQ IE + KIR+AK + ++ +++DG + K L
Sbjct: 127 YLNRIDLLTIMTVDVGFAGQPFIEEMLDKIREAKRIREEKGYHYQIQIDGSCKASTFKKL 186
Query: 187 VQAGADLLVVGSS 199
+AGAD+L++GSS
Sbjct: 187 TEAGADILILGSS 199
>gi|289435926|ref|YP_003465798.1| ribulose-phosphate 3-epimerase family protein [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289172170|emb|CBH28716.1| ribulose-phosphate 3-epimerase family protein [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 224
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGDELKRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVADDVTEVIRKIRSYNIKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +++++M+L+MTVNPGF GQ+ + K+R KA L GK + L EVDG + +
Sbjct: 123 IYPYLNDVEMVLMMTVNPGFAGQKFQTDVLQKLRDLKAKLAGKVHVPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SY++RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYSERL 213
>gi|304317329|ref|YP_003852474.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778831|gb|ADL69390.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 219
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+ SI+ A+ L E+ + A +H DVMDG FV N++ G VI ++ ++
Sbjct: 2 IRFAASIMCANQLELKNELKRLEDAHIDMLHCDVMDGVFVNNLAMGPYVIERIKEFTKIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H + I + + I+FH E++ + +R I G K +AI+P+T +
Sbjct: 62 LDIHFATVEPEKFIKMFLHIKPEFISFHAETTKDYYKIVRLIKDEGIKASIAISPDTSID 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+++ V+ ++DM+LIMTVNPGF GQ I KI++ K + I+ +EVDG + +
Sbjct: 122 VIKSVLKDLDMVLIMTVNPGFSGQSFRSYVIEKIKRVKEICSNEGINPLIEVDGSINEKT 181
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKS 219
I +++AGA++LV+G SS FN K + Y+ + ++K S
Sbjct: 182 IPKVIEAGANVLVLGTSSIFNTKT-VDYSYYIRNIKNS 218
>gi|332209940|ref|XP_003254068.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 2 [Nomascus
leucogenys]
gi|332815348|ref|XP_003309498.1| PREDICTED: ribulose-phosphate 3-epimerase [Pan troglodytes]
gi|194381818|dbj|BAG64278.1| unnamed protein product [Homo sapiens]
Length = 199
Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
P T V L ++IDM L+MTV PGFGGQ+ +E +PK
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 159
>gi|296205471|ref|XP_002749785.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 3
[Callithrix jacchus]
Length = 199
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
P T V L ++IDM L+MTV PGFGGQ+ +E +PK
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 159
>gi|296108872|ref|YP_003615821.1| ribulose-phosphate 3-epimerase [Methanocaldococcus infernus ME]
gi|295433686|gb|ADG12857.1| ribulose-phosphate 3-epimerase [Methanocaldococcus infernus ME]
Length = 224
Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 4/174 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SIL+ADFS L EE+ +AG H D+MDG FVPNIS G + + ++ + + HL
Sbjct: 7 SILSADFSNLKEELKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTSLPVEVHL 66
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ ++D IN D D I+FH E+ R + I+ +G K VA+NP TP+ +E +
Sbjct: 67 MVENVDLFINEFKD--MDYISFHIEAVKFPFRIINKINEIGAKPIVALNPATPIGRIEYI 124
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
+DE+ +L+MTV PGF GQ+ I + KIR+ K++I G + + VDGG+ +
Sbjct: 125 LDEVYGVLVMTVEPGFAGQKFIPIMVKKIRKLKSMIVEGGHDVKIFVDGGINTE 178
>gi|284800774|ref|YP_003412639.1| hypothetical protein LM5578_0522 [Listeria monocytogenes 08-5578]
gi|284993960|ref|YP_003415728.1| hypothetical protein LM5923_0521 [Listeria monocytogenes 08-5923]
gi|284056336|gb|ADB67277.1| hypothetical protein LM5578_0522 [Listeria monocytogenes 08-5578]
gi|284059427|gb|ADB70366.1| hypothetical protein LM5923_0521 [Listeria monocytogenes 08-5923]
Length = 222
Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+S + ++ I +G + +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASRDVNATINHIRELGIRPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN+K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNEKAG-SYTEKLAPLRE 217
>gi|76559938|ref|NP_001029075.1| ribulose-phosphate 3-epimerase [Rattus norvegicus]
gi|75516465|gb|AAI01870.1| Ribulose-5-phosphate-3-epimerase [Rattus norvegicus]
Length = 199
Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
P T V L ++IDM L+MTV PGFGGQ+ +E +PK
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 159
>gi|266624686|ref|ZP_06117621.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
gi|288863446|gb|EFC95744.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
Length = 239
Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 114/201 (56%), Gaps = 4/201 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + PS++ D ++ E+ + + K H D+MDG F N++ +++S R ++
Sbjct: 11 TNMVTFAPSLMCMDLGKIKEQFA-VMDQYMKLYHVDIMDGHFCKNMALTPGILKSFREHT 69
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM ++ I + A AG I+ H E+ + R+++ I +G K GV +NP
Sbjct: 70 NTDIDVHLMTTNPSDWIEMCAAAGATYISPHAETINTDAFRTMQMIQKLGCKCGVVLNPA 129
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TP++ +E ++ IDM+ IMTV+ GF GQ+ I+ KI QAK L K +++DG
Sbjct: 130 TPLSYVESYLEYIDMLTIMTVDIGFAGQKFIDQMYNKIMQAKELREKNGYHYKIQIDGHC 189
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
N + L +AGAD+L+VG++
Sbjct: 190 NKENYRQLAEAGADVLIVGNA 210
>gi|16804698|ref|NP_466183.1| hypothetical protein lmo2661 [Listeria monocytogenes EGD-e]
gi|47095465|ref|ZP_00233074.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|224499334|ref|ZP_03667683.1| hypothetical protein LmonF1_06417 [Listeria monocytogenes Finland
1988]
gi|224503693|ref|ZP_03672000.1| hypothetical protein LmonFR_14539 [Listeria monocytogenes FSL
R2-561]
gi|254829110|ref|ZP_05233797.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|254899887|ref|ZP_05259811.1| hypothetical protein LmonJ_08736 [Listeria monocytogenes J0161]
gi|254912907|ref|ZP_05262919.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937288|ref|ZP_05268985.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|255028234|ref|ZP_05300185.1| hypothetical protein LmonL_01424 [Listeria monocytogenes LO28]
gi|284800453|ref|YP_003412318.1| hypothetical protein LM5578_0199 [Listeria monocytogenes 08-5578]
gi|284993639|ref|YP_003415407.1| hypothetical protein LM5923_0199 [Listeria monocytogenes 08-5923]
gi|16412161|emb|CAD00874.1| lmo2661 [Listeria monocytogenes EGD-e]
gi|47016075|gb|EAL06999.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|258601521|gb|EEW14846.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258609895|gb|EEW22503.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|284056015|gb|ADB66956.1| hypothetical protein LM5578_0199 [Listeria monocytogenes 08-5578]
gi|284059106|gb|ADB70045.1| hypothetical protein LM5923_0199 [Listeria monocytogenes 08-5923]
gi|293590908|gb|EFF99242.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 224
Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGDELQRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEIIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA L GK L EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKIHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|257877468|ref|ZP_05657121.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC20]
gi|257811634|gb|EEV40454.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC20]
Length = 228
Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 118/210 (56%), Gaps = 5/210 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I++ PSI+ AD + L ++ + G +H D++DG F P++ G + I+ +R
Sbjct: 1 MNKNIKLSPSIMCADLANLENSMNELKMNGFDTLHIDLIDGRFSPSMPIGIETIKRMREI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD FD HLM ++ I + G D ITFH E+S H+ ++ + K GVA+NP
Sbjct: 61 SDMKFDVHLMSTNNTFFIQEMISIGVDHITFHYETSRHLDYDIKFVKQNNTKVGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQ---QLIESTIPKIRQAKALIGKRSI--SLEVD 175
TP+++L V+ EIDM+ +M +NPGF Q + I + KI LI + ++VD
Sbjct: 121 TPLSVLNYVLPEIDMVCLMLINPGFASQKSEKQISYGVKKISDLSNLILAEQLHTQIQVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
G V+ I L+ AGA+ LV+GS+ ++G
Sbjct: 181 GRVSLEVIPDLICAGANNLVLGSTSIFREG 210
>gi|256827126|ref|YP_003151085.1| ribulose-phosphate 3-epimerase [Cryptobacterium curtum DSM 15641]
gi|256583269|gb|ACU94403.1| ribulose-phosphate 3-epimerase [Cryptobacterium curtum DSM 15641]
Length = 230
Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 5/207 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL+ADF L +EI +I +AGA +H DVMDG FVPN++ G ++ +
Sbjct: 1 MFEAARISPSILSADFMHLADEIDDIERAGADLVHIDVMDGHFVPNLTIGVPLLNQIARS 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT---IHAMGKKTGVAI 117
+ D HLMI + + A D +T H E+ +L I + G G+A+
Sbjct: 61 AHIPLDVHLMIDNPLVQLPWYLAASPDYVTIHWEALGGRTEALEASALIRSAGVHAGIAL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVD 175
P+TP ++LE + D DM+L+M+V PGF GQ + ++I ++ Q + ++VD
Sbjct: 121 RPDTPTSVLEGIYDAWDMVLVMSVQPGFSGQAFMPASIDRVEQVVRAARQEGACPRIQVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFN 202
GG+++ + GAD+LV G++ F
Sbjct: 181 GGISAETAALVGAVGADVLVAGNAVFK 207
>gi|313620429|gb|EFR91819.1| ribulose-phosphate 3-epimerase family protein [Listeria innocua FSL
S4-378]
Length = 222
Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVKNAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + ++ I +G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRELGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
++++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLEKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
+ GAD+ VVG+ + FN K SY ++L L++
Sbjct: 184 LIEPIGADVYVVGTAALFNDKPG-SYTEKLAPLRE 217
>gi|269215465|ref|ZP_06159319.1| ribulose-phosphate 3-epimerase [Slackia exigua ATCC 700122]
gi|269130952|gb|EEZ62027.1| ribulose-phosphate 3-epimerase [Slackia exigua ATCC 700122]
Length = 244
Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 9/211 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++I PSIL+ADF + +I IT GA IH DVMDG FVPN++ GA V+ L
Sbjct: 12 MHSDVRISPSILSADFMNMERDIEAITMGGADLIHVDVMDGHFVPNLTIGAPVVEGLSHV 71
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTGVA 116
+ D HLM+S+ + ++T H E+ + +++ IHA G K +A
Sbjct: 72 ARIPLDVHLMVSNPLDQLPWFLKHAPYLVTVHAEALDAEAGEFSQAIDAIHAAGSKACIA 131
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI---ESTIPKIRQAKALIGKRSISLE 173
+ P+T V +L VI ++DM+LIM+V PGF GQ I ++ + ++ + G + +E
Sbjct: 132 LRPDTDVDVLAPVIADLDMVLIMSVYPGFSGQSYIGGSDARVARVVEIARAAGASPL-IE 190
Query: 174 VDGGVTSRN-IKSLVQAGADLLVVGSSFFNQ 203
VDGG+ + +++V AGAD+LV GS+ F+
Sbjct: 191 VDGGLGANEATRAVVAAGADVLVAGSAVFSN 221
>gi|29840310|ref|NP_829416.1| ribulose-phosphate 3-epimerase [Chlamydophila caviae GPIC]
gi|29834659|gb|AAP05294.1| ribulose-phosphate 3-epimerase [Chlamydophila caviae GPIC]
Length = 231
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 110/201 (54%), Gaps = 4/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+ D + +G E I ++GA IH DVMDG FVPN++FG VI ++ +D +
Sbjct: 11 IAPSIMGGDLACIGAEAKKIEESGADLIHIDVMDGHFVPNLTFGPGVIAAINRSTDLFLE 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + I AG D + H E+S ++ L I G + G+A +PET + +
Sbjct: 71 VHAMIYTPFDFIEAFVKAGADRVIVHFEASEDLKELLAYIKKCGIQAGLAFSPETSIEFI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIG-KRSISLEVDGGVTSRN 182
+ D++L+M+V+PGF GQ I KI RQA +G + S +EVDGG+ +
Sbjct: 131 PPFLPFCDVLLLMSVHPGFCGQGFIPDVPDKIRFTRQALKTMGLEDSCLIEVDGGINEAS 190
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
K +AGAD+LV S F +
Sbjct: 191 AKECREAGADILVAASYMFQK 211
>gi|260101416|ref|ZP_05751653.1| ribulose-phosphate 3-epimerase [Lactobacillus helveticus DSM 20075]
gi|260084756|gb|EEW68876.1| ribulose-phosphate 3-epimerase [Lactobacillus helveticus DSM 20075]
Length = 216
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E I G + H D+MDG FVPN+SFG +I R +
Sbjct: 3 IAPSILNADNLNLKENIKEAVAVGIDRFHIDIMDGHFVPNLSFGPQLISDFKREFPMIDA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H M ++ D I AG DI+ H S + L + + G +T +AI P+
Sbjct: 63 EIHFMSNNPDDLIPAFVAAGADIMELHYGAMSESKLNYWLDYLASNGVETVLAIKPDVQA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++E + +I +L+MTVNPGFGGQ I + KI+Q + ++G ++ +EVDGG+ R I
Sbjct: 123 DVIEKFLPKIKQVLVMTVNPGFGGQSFIADSAEKIKQVREIVGP-NMPIEVDGGINDRTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K AGAD+ VVGS + + ++L + K
Sbjct: 182 KIAKDAGADVFVVGSYLYKNGNITNQVRKLEKIIK 216
>gi|300781123|ref|ZP_07090977.1| ribulose-phosphate 3-epimerase [Corynebacterium genitalium ATCC
33030]
gi|300532830|gb|EFK53891.1| ribulose-phosphate 3-epimerase [Corynebacterium genitalium ATCC
33030]
Length = 223
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 4/222 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSILAAD++ LG ++ + A IH D+MDG FVPN+SFG DV +++ +D
Sbjct: 2 IYIAPSILAADYAALGADVEKVPTA--DLIHVDIMDGHFVPNLSFGPDVTKAVNRVTDQF 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+MI + DAG D + FH E++ + + +H +G + G AI P TP+
Sbjct: 60 LDIHMMIEEPERWFETYIDAGGDRLVFHIEATNDHINAAKKLHDLGVEAGFAIKPGTPIE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
D ++ + ++IM+V PGFGGQ+ + + K+ + I +S + +DGG+
Sbjct: 120 PYLDDLEHFEEVMIMSVEPGFGGQKFMPEVLNKVVTLREHIANAGLSTIIGIDGGIGEST 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
IK +AG + V GS+ F ++L L A D
Sbjct: 180 IKQAAEAGVESFVAGSAVFGAHDPAEAVEKLRGLATEARPAD 221
>gi|313900917|ref|ZP_07834407.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312954337|gb|EFR36015.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 221
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSI+ + K +HFD+MDG +V N+ G + + ++ S
Sbjct: 3 IKISPSIMCCKVEEYKPYLELFEKVQLDSVHFDIMDGAYVKNVMLGTPIYKDIKRLSKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M + ++ D I+FHPE++ + L+TI G K G+ +NP TPV+
Sbjct: 63 VDVHIMSYRPEEYMEYYDIQPGDRISFHPETTAQPYKLLQTIRDKGCKAGLVLNPGTPVS 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
LE+ +D +D + +MTVNPGF GQ+++ KIR+ + L+ ++ I + VDG T N
Sbjct: 123 YLEECMDLLDYVTLMTVNPGFAGQKMVPDAPQKIRRVRQLLDAYEKEIDIVVDGNTTIEN 182
Query: 183 IKSLVQAGADLLVVGSS 199
+ + AGA+ VVG+S
Sbjct: 183 SRLMRDAGANAFVVGTS 199
>gi|325478928|gb|EGC82036.1| putative ribulose-phosphate 3-epimerase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 220
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 120/203 (59%), Gaps = 3/203 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I+PSIL +DF + E ++ + K+ K+IH D+MDG FV +++FG +++LR ++D
Sbjct: 2 VDILPSILNSDFWNIKETLNALNKSKIKEIHIDIMDGNFVEDMAFGPKFVKTLREHTDLK 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + + +AG ITF+ ES+ ++ ++ + KK GVAI+P T ++
Sbjct: 62 LDLHLMIINPERKVEKFIEAGAHSITFNVESTFNVMNIIQKVKECNKKVGVAISPHTSIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
+E ++ +D +L++T+ PG +I KI++ + ++ S VDG V +
Sbjct: 122 SIEMILPFVDQVLVLTIKPGTSNSHIITEMYSKIKELHEIKNRKEYSYRIMVDGKVDDKT 181
Query: 183 IKSLVQAGADLLVVGSSFF-NQK 204
++ ++++GAD +V G F N+K
Sbjct: 182 LRPILESGADAVVSGGYIFKNEK 204
>gi|74005317|ref|XP_861342.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase isoform 6
[Canis familiaris]
Length = 172
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
P T V L ++IDM L+MTV PGFGGQ+ +E +PK
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 159
>gi|310830042|ref|YP_003962399.1| Ribulose-phosphate 3 epimerase family protein [Eubacterium limosum
KIST612]
gi|308741776|gb|ADO39436.1| Ribulose-phosphate 3 epimerase family protein [Eubacterium limosum
KIST612]
Length = 215
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 5/211 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SILA D +R+GE+I AG IH D+MDG +V N+++G ++R L+ S H
Sbjct: 7 SILACDQTRIGEQIIKAEAAGIDYIHVDIMDGVYVENMTYGPQLVRDLKKISGLPVSVHF 66
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
+ ++ I AD G DI+TF ++ + ++ I G K G+ I P L +
Sbjct: 67 EVCHPETFFPIFADCGADIVTFQLDACANPLHLIQEIRKRGIKAGIGIGPTYGTERLAYL 126
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLV 187
+ ID +++M+ PG+GGQ L K+R+A+ ++ K + + VDGGV N + LV
Sbjct: 127 LPCIDWLIMMSAEPGYGGQPLNPCIYEKLREAQEIMAKTGSRVPVSVDGGVNGSNGQGLV 186
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+AGAD+L+ GS F + +R+ +LK
Sbjct: 187 EAGADVLIAGSYVFQDD---AVEERVQNLKN 214
>gi|94986662|ref|YP_594595.1| Pentose-5-phosphate-3-epimerase [Lawsonia intracellularis
PHE/MN1-00]
gi|94730911|emb|CAJ54274.1| Pentose-5-phosphate-3-epimerase [Lawsonia intracellularis
PHE/MN1-00]
Length = 155
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 101/145 (69%), Gaps = 5/145 (3%)
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
MISS + +I+ AG +++ H E++ H++R + IH +G K GVA+NP T +++LE +
Sbjct: 1 MISSPERYISNFHTAGANLLVVHVEATIHLQRVVSEIHRLGMKAGVALNPSTSLSVLEYI 60
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLV 187
+D+ID++L+M+VNPGFGGQ + ST KI + +I +R +I ++VDGGVT N K+L+
Sbjct: 61 LDDIDLVLLMSVNPGFGGQHFLSSTYEKIYNLRRMIDEREKTILIQVDGGVTLSNTKALL 120
Query: 188 QAGADLLVVGSSFFNQKGEISYAKR 212
AG D+ V GSSFF GE SY+++
Sbjct: 121 DAGTDVFVCGSSFF--VGE-SYSEK 142
>gi|323466290|gb|ADX69977.1| Ribulose-phosphate 3-epimerase [Lactobacillus helveticus H10]
Length = 216
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 113/215 (52%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E I G + H D+MDG FVPN+SFG +I R + +
Sbjct: 3 IAPSILNADNLNLKENIKEAVAVGIDRFHIDIMDGHFVPNLSFGPQLISDFKREFPMTDA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H M ++ D I AG DI+ H S + L + + G + +AI P+
Sbjct: 63 EIHFMSNNPDDLIPAFVAAGADIMELHYGAMSESKLNYWLDYLASNGVEAVLAIKPDVQA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++E + +I +L+MTVNPGFGGQ I + KI+Q + ++G ++ +EVDGG+ R I
Sbjct: 123 DVIEKFLPKIKQVLVMTVNPGFGGQSFIADSAEKIKQVREIVGP-NMPIEVDGGINDRTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K AGAD+ VVGS + + ++L + K
Sbjct: 182 KIAKDAGADVFVVGSYLYENGNITNQVRKLEKIIK 216
>gi|313610562|gb|EFR85681.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes FSL F2-208]
Length = 197
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 114/194 (58%), Gaps = 2/194 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+SP + ++ I A+G K +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRALGIKPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS 198
L GAD+ VVG+
Sbjct: 184 LLEPIGADVYVVGT 197
>gi|167750676|ref|ZP_02422803.1| hypothetical protein EUBSIR_01653 [Eubacterium siraeum DSM 15702]
gi|167656355|gb|EDS00485.1| hypothetical protein EUBSIR_01653 [Eubacterium siraeum DSM 15702]
Length = 215
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 119/220 (54%), Gaps = 13/220 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I S+LA+D + + +EI A + +H DVMDG FV NI++G +V+ ++R SD FD
Sbjct: 5 ISASMLASDLTNIEKEIHRTENAQVEWLHIDVMDGVFVDNITYGNNVVAAMRKVSDIYFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ + I + A AG +++T H ES + +L+ I G G+AI P T +
Sbjct: 65 THLMVTDPTNLIPLFALAGSNMLTIHLESKGNTTANLKYIKKSGMNAGLAIKPATDWKEV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+ DM+L+MTV PG+GGQ I K+ + G ++++VDGG+ +
Sbjct: 125 IPYLPLCDMVLVMTVEPGYGGQGFIPQCADKVAMLRKYCNENGFDKMNIQVDGGINTATA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++ AGA++LV G+ F R D+K +A AI
Sbjct: 185 ATVKDAGANVLVAGTYLF----------RAVDMKAAADAI 214
>gi|239626167|ref|ZP_04669198.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47_FAA]
gi|239520397|gb|EEQ60263.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47FAA]
Length = 225
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 119/217 (54%), Gaps = 7/217 (3%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E++ I A H D+MDG +V NI+ D +++R + DCH
Sbjct: 7 PSLMCMDLLNIKEQLQ-ILNTRADFYHVDIMDGHYVKNITLSPDFCKAIRPVCEIPLDCH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
LM+++ D I +A AG I H E+ + R + IH++G K GV +NP TPV+ ++
Sbjct: 66 LMVTTPDDFIEPLAKAGVGYICPHAETINADAFRIVNKIHSLGCKVGVVLNPATPVSYIQ 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKS 185
I +D + +MTV+PGF GQ I + KI + KAL ++ +EVDG R
Sbjct: 126 HYIHLLDKVTVMTVDPGFAGQPFIREMLDKISELKALKEEKGYGYLIEVDGSCNERTFGD 185
Query: 186 LVQAGADLLVVGSS-FFNQKGEI--SYAKRLNDLKKS 219
L +AG ++ +VG+S FN ++ ++ K +++ K+
Sbjct: 186 LAKAGTEVFIVGTSGLFNLDKDLAAAWDKMMDNFNKA 222
>gi|227886876|ref|ZP_04004681.1| allulose-6-phosphate 3-epimerase [Escherichia coli 83972]
gi|300988456|ref|ZP_07178694.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 45-1]
gi|301047696|ref|ZP_07194758.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 185-1]
gi|227836218|gb|EEJ46684.1| allulose-6-phosphate 3-epimerase [Escherichia coli 83972]
gi|300300442|gb|EFJ56827.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 185-1]
gi|300407454|gb|EFJ90992.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 45-1]
gi|315287888|gb|EFU47290.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 110-3]
gi|315293999|gb|EFU53351.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 153-1]
gi|315296099|gb|EFU55408.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 16-3]
gi|324008663|gb|EGB77882.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 57-2]
Length = 222
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 61 QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPVEAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AGA
Sbjct: 121 DKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I A R+
Sbjct: 181 DVFIVGTSGLFNHAENIDEAWRI 203
>gi|315305015|ref|ZP_07875073.1| ribulose-phosphate 3-epimerase family protein [Listeria ivanovii
FSL F6-596]
gi|313626613|gb|EFR95688.1| ribulose-phosphate 3-epimerase family protein [Listeria ivanovii
FSL F6-596]
Length = 224
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGDELKRLESAGVELLHCDVMDGVYVNNLALGPEHLGIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVADDVTEVIRKIRSYNIKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA-LIGKRSISL-EVDGGVTSRNI 183
+ +++++M+L+MTVNPGF GQ+ + K+R KA L GK + L EVDG + +
Sbjct: 123 IYPYLNDVEMVLMMTVNPGFAGQKFQTDVLQKLRDLKAKLAGKVHVPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ D+ V+G+S F+ + + SY++RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYSERL 213
>gi|300938234|ref|ZP_07153001.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
gi|300456778|gb|EFK20271.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
Length = 222
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 61 QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKMGLILNPETPVEAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AGA
Sbjct: 121 DKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I A R+
Sbjct: 181 DVFIVGTSGLFNHAENIDEAWRI 203
>gi|62185162|ref|YP_219947.1| ribulose-phosphate 3-epimerase [Chlamydophila abortus S26/3]
gi|62148229|emb|CAH63988.1| putative epimerase [Chlamydophila abortus S26/3]
Length = 231
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 112/215 (52%), Gaps = 4/215 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PSI+ D + +G E I ++GA IH DVMDG FVPN++FG VI ++ +D
Sbjct: 7 PKTLIAPSIMGGDLACIGAEAKRIEESGADLIHIDVMDGHFVPNLTFGPGVIAAINRSTD 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ H MI + + +G D I H E+S ++ L I G + G+A +PET
Sbjct: 67 IFLEVHAMIYTPFDFVEEFVKSGADRIIVHFEASEDLKELLSYIKKCGIQAGLAFSPETS 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGGV 178
+ + + D+IL+M+V+PGF GQ I KIR K I + S +EVDGG+
Sbjct: 127 IEFIPPFLPFCDVILLMSVHPGFCGQGFIPDIPDKIRFTKQAIKTMGLEGSCLIEVDGGI 186
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ K +AGAD+LV S F + + K L
Sbjct: 187 NETSAKICREAGADILVAASYIFEKNEQTMEEKVL 221
>gi|325002921|ref|ZP_08124033.1| ribulose-phosphate 3-epimerase [Pseudonocardia sp. P1]
Length = 208
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDII 89
GA +H DVMD FVPN++ G V+ SL + +D DCHLMI + D A+AG +
Sbjct: 11 GADWLHVDVMDAHFVPNLTLGLPVVTSLLASTDLPMDCHLMIENPDHWAIGYAEAGAHNV 70
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ 149
T H E++ + + A G K G+AI P TP+ V+ D +L+M+V PGFGGQ
Sbjct: 71 TVHVEAAEDPVMLAKDLRAAGAKAGLAIKPGTPLEPYFGVLRHYDTLLVMSVEPGFGGQT 130
Query: 150 LIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
I + K+R A+ L+ G ++ +E+DGG+ + I + +AG D V GS+ +
Sbjct: 131 FIAEVLDKVRTARTLVDTGHLNLMVEIDGGINAETIGAAAEAGVDCFVAGSAVY 184
>gi|291618343|ref|YP_003521085.1| AlsE [Pantoea ananatis LMG 20103]
gi|291153373|gb|ADD77957.1| AlsE [Pantoea ananatis LMG 20103]
Length = 231
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 120/215 (55%), Gaps = 9/215 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PS++ + + ++++ + A +H D+MDG +V NI+ I +R ++
Sbjct: 4 IQISPSLMCMNLMEIKQQLA-VLNTRADFLHVDIMDGHYVKNITLSPFFIEQIRPHTPVA 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ I +A+AG D I H E+ + R + I ++GKK GV +NP TPV
Sbjct: 63 IDVHLMVEQPTDFIEAVANAGADYICPHAETINRDAFRVINLIRSLGKKPGVVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS----ISLEVDGGVT 179
+ + + +D I +MTV+PG+ GQ I + KIR AL KR+ +E+DG
Sbjct: 123 SFIHHYLHLLDKITVMTVDPGYAGQPFIPEMVEKIRALSAL--KRAHGYHYLIEIDGSCN 180
Query: 180 SRNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
R ++L++AGA++L+VG+S FN ++S A +
Sbjct: 181 QRTYRTLLEAGAEVLIVGTSGLFNLHDDLSTAWTM 215
>gi|327394736|dbj|BAK12158.1| D-allulose-6-phosphate 3-epimerase AlsE [Pantoea ananatis AJ13355]
Length = 231
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 120/215 (55%), Gaps = 9/215 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PS++ + + ++++ + A +H D+MDG +V NI+ I +R ++
Sbjct: 4 IQISPSLMCMNLMEIKQQLA-VLNTRADFLHVDIMDGHYVKNITLSPFFIEQIRPHTPVA 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ I +A+AG D I H E+ + R + I ++GKK GV +NP TPV
Sbjct: 63 IDVHLMVEQPTDFIEAVANAGADYICPHAETINRDAFRVINLIRSLGKKPGVVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS----ISLEVDGGVT 179
+ + + +D I +MTV+PG+ GQ I + KIR AL KR+ +E+DG
Sbjct: 123 SFIHHYLHLLDKITVMTVDPGYAGQPFIPEMVEKIRALSAL--KRAHGHHYLIEIDGSCN 180
Query: 180 SRNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
R ++L++AGA++L+VG+S FN ++S A +
Sbjct: 181 QRTYRTLLEAGAEVLIVGTSGLFNLHDDLSTAWTM 215
>gi|325969918|ref|YP_004246109.1| ribulose-phosphate 3-epimerase [Spirochaeta sp. Buddy]
gi|324025156|gb|ADY11915.1| Ribulose-phosphate 3-epimerase [Spirochaeta sp. Buddy]
Length = 235
Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 7/229 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M P + PS+ + L + + + AG +H D+MDG +VPN+ F ++ L++
Sbjct: 1 MKPVVINSPSLANCNLLELKDNVQELVDAGVTWMHIDLMDGHYVPNLYFPIRIVSDLKAA 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
Y D H+M+++ +I ++DAG D ++FH +S+ + R+L TI G K+G+ +NP
Sbjct: 61 YPQLTLDVHMMVTNPMDYIQRLSDAGADYLSFHSDSTNFVIRTLETIRKSGMKSGILVNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDG 176
V +E +D +DM+ +M V PGF GQQ + T+ ++ A + K S + VDG
Sbjct: 121 SQSVRSIEPYVDLLDMVTLMAVEPGFAGQQFMSRTLKRVEDL-ATVRKESGQDFLINVDG 179
Query: 177 GVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYA-KRLNDLKKSALAI 223
+ N+ + GA+++V G + F Q I+ A KR N +A+ +
Sbjct: 180 AINYPNLTPCIVRGANVIVTGIFTIFKQPDGITAACKRFNAEAANAMQL 228
>gi|47094725|ref|ZP_00232340.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|224500405|ref|ZP_03668754.1| hypothetical protein LmonF1_12354 [Listeria monocytogenes Finland
1988]
gi|254829408|ref|ZP_05234095.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|254900275|ref|ZP_05260199.1| hypothetical protein LmonJ_10690 [Listeria monocytogenes J0161]
gi|254911171|ref|ZP_05261183.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes J2818]
gi|254935499|ref|ZP_05267196.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|47016865|gb|EAL07783.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|258601822|gb|EEW15147.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258608076|gb|EEW20684.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|293589098|gb|EFF97432.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes J2818]
Length = 222
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ + + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+S + ++ I +G + +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASRDVNATINHIRELGIRPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN+K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNEKAG-SYTEKLAPLRE 217
>gi|157147981|ref|YP_001455300.1| allulose-6-phosphate 3-epimerase [Citrobacter koseri ATCC BAA-895]
gi|157085186|gb|ABV14864.1| hypothetical protein CKO_03788 [Citrobacter koseri ATCC BAA-895]
Length = 222
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 61 QDYIGQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPVEAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D + +MTV+PGF GQ I + KI + KA + + +EVDG K L+ AGA
Sbjct: 121 DKVTVMTVDPGFAGQPFIPEMLDKIAELKAWREREGLHYEIEVDGSCNQATYKKLMAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I A ++
Sbjct: 181 DVFIVGTSGLFNHAENIDDAWQV 203
>gi|323342151|ref|ZP_08082384.1| ribulose-phosphate 3-epimerase [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322464576|gb|EFY09769.1| ribulose-phosphate 3-epimerase [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 216
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 5/200 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ DF + ++ + AGA +H+DVMDG FV NISFG +++ + SD + D
Sbjct: 5 VSPSLLSLDFKDMKTQLKRVEVAGATWLHYDVMDGVFVDNISFGPSIMKQIGQVSDLLMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK---KTGVAINPETPV 123
HLMI + + + ++ + G D ITFH E + + + + K K G+ + P T +
Sbjct: 65 VHLMIVNPEKYFDMFIENGADAITFHTECYGDPTQGIEAVKQLKKKGIKAGITLRPGTDL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSR 181
+ + +D++L+M+V PGFGGQ + + +I+Q + + + VDGG+
Sbjct: 125 DKIVPYLKHVDLVLVMSVEPGFGGQAFMPEMLERIKQLDEMRKLNNYEYLISVDGGINGE 184
Query: 182 NIKSLVQAGADLLVVGSSFF 201
AGAD+LV GS F
Sbjct: 185 TGPRARLAGADILVAGSYVF 204
>gi|161507724|ref|YP_001577685.1| ribulose-phosphate 3-epimerase [Lactobacillus helveticus DPC 4571]
gi|160348713|gb|ABX27387.1| Ribulose-phosphate 3-epimerase [Lactobacillus helveticus DPC 4571]
Length = 216
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 112/215 (52%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E I G + H D+MDG FVPN+SFG +I R +
Sbjct: 3 IAPSILNADNLNLKENIKEAVAVGIDRFHIDIMDGHFVPNLSFGPQLISDFKREFPMIDA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H M ++ D I AG DI+ H S + L + + G + +AI P+
Sbjct: 63 EIHFMSNNPDDLIPAFVAAGADIMELHYGAMSESKLNYWLDYLASNGVEAVLAIKPDVQA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++E + +I +L+MTVNPGFGGQ I + KI+Q + ++G ++ +EVDGG+ R I
Sbjct: 123 DVIEKFLPKIKQVLVMTVNPGFGGQSFIADSAEKIKQVREIVGP-NMPIEVDGGINERTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K AGAD+ VVGS + + ++L + K
Sbjct: 182 KIAKDAGADVFVVGSYLYKNGNITNQVRKLEKIIK 216
>gi|325499766|gb|EGC97625.1| allulose-6-phosphate 3-epimerase [Escherichia fergusonii ECD227]
Length = 222
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 110/203 (54%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I+ +A AG + IT HPE+ + R + I +G K G+ +NPETPV ++ I +
Sbjct: 61 QDYISQLAQAGANFITLHPETINGQAFRLIDEIRRLGMKVGLILNPETPVEAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF GQ I + KI + KA + + +EVDG L+ AGA
Sbjct: 121 DKITVMTVDPGFAGQPFIPEMLNKIAELKAWREREGLHYEIEVDGSCNQATYDRLIAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I+ A ++
Sbjct: 181 DVFIVGTSGLFNHADNITDAWQV 203
>gi|332289192|ref|YP_004420044.1| allulose-6-phosphate 3-epimerase [Gallibacterium anatis UMN179]
gi|330432088|gb|AEC17147.1| allulose-6-phosphate 3-epimerase [Gallibacterium anatis UMN179]
Length = 225
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 5/211 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I I PS++ D + ++I + + H D+MDG +VPN++ ++ + +
Sbjct: 3 KILISPSLMCMDLLKFKQQIEFLDQH-VDYFHIDIMDGHYVPNLTLSPFFVQQVNRIATK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM++ +++I+ +A AG D+IT H E+ S R I + K G+ NPETP
Sbjct: 62 PLDCHLMVTKPENYIDDLAKAGADMITLHVETISGQAFRLFEKIRKLDMKVGLIFNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + + +ID + ++TV+PGF GQ I + KI + K + ++ +E+DG
Sbjct: 122 IEAAKYYLHKIDKVTVLTVDPGFAGQSFIPEMLDKIEELKKYREQNKLNYLIEIDGSCNP 181
Query: 181 RNIKSLVQAGADLLVVGSS-FFNQKGEISYA 210
+ K+L+ GAD+ +VGSS FN +I A
Sbjct: 182 KTFKTLLNVGADVFIVGSSGLFNNNPDIEMA 212
>gi|300994970|ref|ZP_07180994.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 200-1]
gi|300304867|gb|EFJ59387.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 200-1]
gi|324015794|gb|EGB85013.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 60-1]
Length = 222
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 61 QDYIAQLARAGADFITLHPETINGQAFRLIDEICRHGMKVGLILNPETPVEAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AGA
Sbjct: 121 DKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I A R+
Sbjct: 181 DVFIVGTSGLFNHAENIDEAWRI 203
>gi|23006094|ref|ZP_00048579.1| COG0036: Pentose-5-phosphate-3-epimerase [Magnetospirillum
magnetotacticum MS-1]
Length = 160
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 88/133 (66%), Gaps = 1/133 (0%)
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT 140
++ G T H E PHI RSL+TI A+G++ GVA+NP TP + +E ++D +D++L+MT
Sbjct: 11 FSETGRTRFTVHVEPGPHIHRSLQTIRALGRRAGVALNPGTPASAIEPLLDMVDLVLVMT 70
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
VNPGFGGQ I S + + + KAL+G R+I + VDGG+T QAGA++LV GS+
Sbjct: 71 VNPGFGGQSFIHSALETVSRVKALVGGRNIDISVDGGITPETAGPAAQAGANILVAGSAA 130
Query: 201 FNQKGEISYAKRL 213
F + G +Y K +
Sbjct: 131 F-KGGPAAYQKNI 142
>gi|15618109|ref|NP_224394.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae CWL029]
gi|16752856|ref|NP_445126.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae AR39]
gi|33241523|ref|NP_876464.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae TW-183]
gi|6226025|sp|Q9Z8Z9|RPE_CHLPN RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|4376454|gb|AAD18338.1| Ribulose-P Epimerase [Chlamydophila pneumoniae CWL029]
gi|7189496|gb|AAF38401.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae AR39]
gi|33236031|gb|AAP98121.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae TW-183]
Length = 229
Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSI+ AD + LG E + +AG+ IH D+MDG FVPN++FG +I ++ +D
Sbjct: 6 SVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H MI + I +G D I H E+S I+ L I G + G+A +P+T +
Sbjct: 66 FLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSI 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIG-KRSISLEVDGGVT 179
L + D++++M+V PGF GQ + +TI KI R A +G K S +EVDGG+
Sbjct: 126 EFLPSFLPFCDVVVLMSVYPGFTGQSFLPNTIEKIAFARHAIKTLGLKDSCLIEVDGGID 185
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
++ AGAD+LV S F
Sbjct: 186 QQSAPLCRDAGADILVTASYLFE 208
>gi|269303060|gb|ACZ33160.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae LPCoLN]
Length = 229
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSI+ AD + LG E + +AG+ IH D+MDG FVPN++FG +I ++ +D
Sbjct: 6 SVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H MI + I +G D I H E+S I+ L I G + G+A +P+T +
Sbjct: 66 FLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSI 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIG-KRSISLEVDGGVT 179
L + D++++M+V PGF GQ + +TI KI R A +G K S +EVDGG+
Sbjct: 126 EFLPSFLPLCDVVVLMSVYPGFTGQSFLPNTIEKIAFARHAIKTLGLKDSCLIEVDGGID 185
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
++ AGAD+LV S F
Sbjct: 186 QQSAPLCRDAGADILVTASYLFE 208
>gi|315305657|ref|ZP_07875303.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
gi|313625974|gb|EFR95460.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
Length = 165
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+++ +++I A AG II+ H E++PHI R ++ I G K GV +NP TP +
Sbjct: 13 LDVHLMLANPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKQAGCKAGVVLNPGTPAS 72
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+LE V+ ++D++L MTVNPGFGGQ IESTI +R K S S+EVDGGV
Sbjct: 73 MLEAVLGDVDLVLQMTVNPGFGGQTFIESTIENMRYLDNWRRKNRGSYSIEVDGGVNKAT 132
Query: 183 IKSLVQAGADLLVVGSSFF 201
++ QAG D+LV GS FF
Sbjct: 133 AETCKQAGVDILVAGSYFF 151
>gi|89898264|ref|YP_515374.1| ribulose-phosphate 3-epimerase [Chlamydophila felis Fe/C-56]
gi|89331636|dbj|BAE81229.1| ribulose-phosphate 3-epimerase [Chlamydophila felis Fe/C-56]
Length = 231
Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 4/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+ + + +G E I AGA IH D+MDG FVPN++FG VI ++ ++ +
Sbjct: 11 IAPSIMGGNLACIGTEAKRIEAAGADLIHIDIMDGHFVPNLTFGPGVIAAINRSTNLFLE 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + I +G D I H E+S +++ L I G + G+A +PET + +
Sbjct: 71 VHAMIYTPFDFIEAFVKSGADRIIVHFEASENLKELLSYIKKCGIQAGLAFSPETSIEFI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGGVTSRN 182
++ D++L+M+V+PGF GQ I KIR K I + S +EVDGG+ +
Sbjct: 131 PPLLPFCDVVLLMSVHPGFCGQSFIADVPDKIRFTKQAIKTMGLEDSCLIEVDGGIDEAS 190
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
K +AGAD+LV S F Q
Sbjct: 191 AKICREAGADILVAASYMFQQ 211
>gi|301168572|emb|CBW28162.1| putative ribulose-phosphate 3-epimerase [Bacteriovorax marinus SJ]
Length = 216
Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 3/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA DF + E++ H D+MD FVPN++FG +++ + + D
Sbjct: 4 ISPSLLACDFLNIESELNAFEGFEDLWFHLDIMDAHFVPNLTFGHPIVKLISKKTKIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA-I 125
H M+S+ + I D TFH E++ + ++ GV+I P+TP+ I
Sbjct: 64 AHFMVSNPEFFIETFKDFNIHNFTFHIEATENSFELIKKAKKYYPSVGVSIKPKTPLEDI 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIK 184
+V+ ID++LIM+V PGFGGQ IE + +I L + +++++VDGGV++ N
Sbjct: 124 SSEVLANIDLLLIMSVEPGFGGQAFIEESYERIEYFNKLKTQYPNLTIQVDGGVSNINAD 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L +AGAD LV GS F ++G +Y +++ L++
Sbjct: 184 KLRKAGADNLVAGSYIF-KEGPTTYREKVESLRR 216
>gi|326803470|ref|YP_004321288.1| D-allulose-6-phosphate 3-epimerase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651209|gb|AEA01392.1| D-allulose-6-phosphate 3-epimerase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 229
Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++I PS++ D S+ E+I+ + + H D+MDG FVPNI+ I ++ SD
Sbjct: 3 EVKIAPSLMCMDLSKFNEQITFLNQ-NVDSYHVDIMDGHFVPNITLSPWFIEEVKKVSDV 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM++ + + + + CD I H E + R + IH G K GV +NPET
Sbjct: 62 PISSHLMVNDMSFWVKKMINLNCDWICMHVERLNGLAFRLIDQIHDAGLKAGVVLNPETA 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + ID +D + IMTV+PGF GQ+ + + KI+Q K L K + + +EVDG
Sbjct: 122 IESIYPYIDLVDKVTIMTVDPGFAGQRFLPVALEKIKQLKELKEKYNYNYVIEVDGSCNE 181
Query: 181 RNIKSLVQAGADLLVVGSS-FFNQKGEISYAKR 212
+ K + ++G + +VG+S FN G+I A +
Sbjct: 182 KTFKVIKESGTESFIVGNSGLFNLAGDIDEAWQ 214
>gi|323190032|gb|EFZ75310.1| ribulose-phosphate 3-epimerase [Escherichia coli RN587/1]
Length = 222
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFIDN-HADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 61 QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPVDAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AGA
Sbjct: 121 DKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQVTYEKLMAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I A R+
Sbjct: 181 DVFIVGTSGLFNHAENIDEAWRI 203
>gi|13541095|ref|NP_110783.1| ribulose-phosphate 3-epimerase [Thermoplasma volcanium GSS1]
gi|14324480|dbj|BAB59408.1| ribulose-5-phosphate 3-epimerase [Thermoplasma volcanium GSS1]
Length = 211
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 113/199 (56%), Gaps = 6/199 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSI+AA ++ ++ AGA H DVMDG FVPNI+ G D +LRS S D
Sbjct: 3 VSPSIVAASLTKFQAQVKECEDAGAYSFHLDVMDGNFVPNITVGPDFYFALRSISKIPID 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ D + D + H ES +I+ ++ + G K G+ INP TP + +
Sbjct: 63 THLMVDRPDYYYEKFLSQN-DRVLIHYESPINIKGLIKKMENEGVKYGLVINPNTPFSKV 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
D+++ +++LIM+V PGF GQ+ I+ + KI++A+ I G R++ +EVDGG+
Sbjct: 122 SDLLERAEILLIMSVYPGFSGQKFIDVS-EKIKEARNYIKEMGLRTM-IEVDGGINENTA 179
Query: 184 KSLVQAGADLLVVGSSFFN 202
K + AGAD++V S F+
Sbjct: 180 KIVKNAGADIVVSASYLFS 198
>gi|70939366|ref|XP_740235.1| D-ribulose-5-phosphate 3-epimerase [Plasmodium chabaudi chabaudi]
gi|56517810|emb|CAH84319.1| D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium chabaudi
chabaudi]
Length = 227
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 123/203 (60%), Gaps = 11/203 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ Y++++ F
Sbjct: 8 IAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTNNIFF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSL---RTIHAMGKKTGVAINPET 121
D HLM+ + + +++++ + + +TFH E+ + + + + + I + G++I P+T
Sbjct: 68 DVHLMVENPEKYVSLLKTS--NQLTFHFEALNEDVEKCIELAKVIKSNNMWCGISIKPKT 125
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V L +ID ID +L+MTV PGFGGQ + + K+ + ++++++VDGG+
Sbjct: 126 SVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQVDGGLN 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ GA+++V G+S FN
Sbjct: 184 IETTEISASHGANIIVAGTSIFN 206
>gi|261822956|ref|YP_003261062.1| allulose-6-phosphate 3-epimerase [Pectobacterium wasabiae WPP163]
gi|261606969|gb|ACX89455.1| Ribulose-phosphate 3-epimerase [Pectobacterium wasabiae WPP163]
Length = 230
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 120/223 (53%), Gaps = 16/223 (7%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ + + ++++ + + A +H D+MDG +V NI+ I +R ++ V
Sbjct: 4 KISPSLMCMNLMEIKQQLA-VLNSRADFLHVDIMDGHYVKNITLSPFFIEQIRPHTPLVI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I+ IA AG D I H E+ + R + I A+GKK GV +NP TP+
Sbjct: 63 DVHLMVETPTDFIDAIAKAGADYICPHAETINRDAFRVINQIRALGKKVGVVLNPATPIE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ I +D I IMTV+PG+ GQ I + KI Q KAL + S +E+DG +
Sbjct: 123 FIHHYIHLLDKITIMTVDPGYAGQPFIPEMLQKIAQLKALKQQHGYSYLIEIDGSCNQKT 182
Query: 183 IKSLVQAGADLLVVGSS-FFN-----------QKGEISYAKRL 213
L+ AGA++L+VG+S FN G I+ A+RL
Sbjct: 183 YGMLLDAGAEVLIVGTSGLFNLHDDLATSWETMTGHIAQAQRL 225
>gi|308064308|gb|ADO06195.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Sat464]
Length = 217
Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI +++ A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLEKVAQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNAGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSL 186
I L
Sbjct: 179 IFEL 182
>gi|254830516|ref|ZP_05235171.1| hypothetical protein Lmon1_04107 [Listeria monocytogenes 10403S]
Length = 222
Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ + + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+S + ++ I +G + +A++P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASRDVNATINHIRELGIRPSIALSPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN+K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNEKAG-SYTEKLAPLRE 217
>gi|238894745|ref|YP_002919479.1| allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae NTUH-K2044]
gi|238547061|dbj|BAH63412.1| putative ribulose-phosphate 3-epimerase [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 229
Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 8/196 (4%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D +L E++ + A ++H D+MDG +V N++ A + +R Y+ D H
Sbjct: 7 PSLMCMDMMKLTEQL-RFLNSKADRLHVDIMDGHYVKNLALSASFVAQIRPYTSLPIDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM---GKKTGVAINPETPVAI 125
LM+ + S I + DAG D + HPE+ R + R I+ + GK+ G+ +NP TPV
Sbjct: 66 LMVEAPASFIPALLDAGADAFSLHPETI--CREAFRVINMLRQAGKEVGMVLNPATPVES 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNI 183
++ + +D + +MTV+PG+ GQ I + KI Q L G LEVDG
Sbjct: 124 IQHYLHLLDKVTVMTVDPGYAGQPFIPEMLAKITQLHQLKETGSLRFLLEVDGSCNRNTY 183
Query: 184 KSLVQAGADLLVVGSS 199
++L+ AGA +LV+GSS
Sbjct: 184 RALLGAGAQILVMGSS 199
>gi|329942900|ref|ZP_08291679.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci Cal10]
gi|332287493|ref|YP_004422394.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci 6BC]
gi|313848072|emb|CBY17070.1| putative epimerase [Chlamydophila psittaci RD1]
gi|325506758|gb|ADZ18396.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci 6BC]
gi|328815160|gb|EGF85149.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci Cal10]
gi|328914741|gb|AEB55574.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci 6BC]
Length = 231
Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 110/211 (52%), Gaps = 4/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+ D + +G E I ++GA IH DVMDG FVPN++FG VI ++ +D +
Sbjct: 11 IAPSIMGGDLACIGAEAKRIEESGADLIHIDVMDGHFVPNLTFGPGVIAAINRSTDIFLE 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + + +G D I H E+S ++ L I G + G+A +PET + +
Sbjct: 71 VHAMIYTPFDFVEEFVKSGADRIIVHFEASEDLKELLSYIKKCGIQAGLAFSPETSIEFI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGGVTSRN 182
+ D+IL+M+V PGF GQ I KIR K I + S +EVDGG+ +
Sbjct: 131 PPFLPFCDVILLMSVRPGFCGQGFIPDIPDKIRFTKQAIKTMGLEDSCLIEVDGGINETS 190
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K +AGAD+LV S F + + K L
Sbjct: 191 AKLCREAGADILVAASYMFEKNEQTMEEKVL 221
>gi|146097880|ref|XP_001468247.1| ribulose-5-phosphate 3-epimerase [Leishmania infantum]
gi|134072614|emb|CAM71329.1| putative ribulose-5-phosphate 3-epimerase [Leishmania infantum
JPCM5]
gi|322502226|emb|CBZ37309.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 263
Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 124/222 (55%), Gaps = 9/222 (4%)
Query: 7 IVPSILAADFSRLGEEISNI-TKAG--AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSILAADF +LG+E++++ + AG A+ IH DVMDG VPNIS G V+ SLR+ +
Sbjct: 30 IDPSILAADFCKLGDEVASVVSPAGGAAEWIHVDVMDGHMVPNISIGPGVVSSLRARFPN 89
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VF D H M+S + IA AG TFH E++ + I A G + GVA+ P T
Sbjct: 90 VFLDVHCMVSDPKQWVPSIAKAGGSGYTFHIEATNDSKDVAEYIRAHGMQVGVAVKPATN 149
Query: 123 VAI-LEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ L+D+I+ +D +L+MTV PGFGGQ + + I + + +++ VDGG+
Sbjct: 150 LTQELKDLIEGHYVDQVLVMTVEPGFGGQSFMHERLSFISELRR--NYPHLNIGVDGGIG 207
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ AGA++L+ G+S F + + L KS +
Sbjct: 208 PSTAEQAADAGANILIAGTSVFRAGDRKAAIEELRASAKSGI 249
>gi|291300086|ref|YP_003511364.1| ribulose-phosphate 3-epimerase [Stackebrandtia nassauensis DSM
44728]
gi|290569306|gb|ADD42271.1| ribulose-phosphate 3-epimerase [Stackebrandtia nassauensis DSM
44728]
Length = 219
Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+RL E S +++ A +H DVMD FVPN++ G V++SL++ +D D
Sbjct: 2 IAPSLLAADFARLAEACSAVSE-DADWLHVDVMDNHFVPNLTIGTPVVKSLKAATDLPLD 60
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI+ A+ G ++FH E+ R + A G K G+AI+ +T +
Sbjct: 61 CHLMITDPKRWAVGYAELGAYNVSFHAEACDDPVGLARDLRAAGTKAGLAIDRDTLIEPY 120
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
D++ E D +LIMT+ GFGGQ + + K+R A+ + G + +EVDGG+ I
Sbjct: 121 LDMLPEFDTLLIMTIKAGFGGQAFMPELLDKVRTARNAVESGHLELRIEVDGGIADDTIA 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGAD V G++ + + +RL L
Sbjct: 181 AAAEAGADAFVAGTAVYGAADPAAAIQRLRAL 212
>gi|154319155|ref|XP_001558895.1| hypothetical protein BC1G_02529 [Botryotinia fuckeliana B05.10]
gi|150856960|gb|EDN32152.1| hypothetical protein BC1G_02529 [Botryotinia fuckeliana B05.10]
Length = 214
Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 108/198 (54%), Gaps = 36/198 (18%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSD--------SVFDCHLMISSIDSHINIIADAGCDIIT 90
MDG FVPNI+FGA V+ +RS+ D FDCH+MI+ + AGCD+
Sbjct: 1 MDGHFVPNITFGAPVVTKIRSHVDRPTAKHGKGTFDCHMMIAEPKKWVKEFQKAGCDLYC 60
Query: 91 FH------------PESSPHIRRS----LRTIHAMGKKTGVAINPETPVAILEDVID--- 131
FH PES+ + + +R IH G G+AI P+T V +L D+++
Sbjct: 61 FHYEAAISSTAAESPESTSESKTNPKELIRYIHDNGMLAGIAIKPDTKVDVLWDILENPE 120
Query: 132 ---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSL 186
DM+LIMTV+PGFGGQ+ + S +PK+ A + KR +++EVDGG+ I
Sbjct: 121 EKERPDMVLIMTVHPGFGGQKFMASELPKV----AELRKRYPDLNIEVDGGLGPGTIDQA 176
Query: 187 VQAGADLLVVGSSFFNQK 204
AGA+++V GS+ F K
Sbjct: 177 ADAGANVIVAGSAVFGAK 194
>gi|304398669|ref|ZP_07380541.1| Ribulose-phosphate 3-epimerase [Pantoea sp. aB]
gi|304353880|gb|EFM18255.1| Ribulose-phosphate 3-epimerase [Pantoea sp. aB]
Length = 230
Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 5/212 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PS++ + + ++ + + A +H D+MDG +V NI+ I +R ++
Sbjct: 4 QISPSLMCMNLMEIKHQL-QVLDSRADFLHVDIMDGHYVKNITLSPFFIEQIRPFTRVAI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I +A AG D I H E+ + R + I + GKK GV +NP TP++
Sbjct: 63 DVHLMVEEPTNFIEAVAKAGADYICPHAETINRDAFRVINLIRSYGKKVGVVLNPATPIS 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ I +D I +MTV+PG+ GQ I + K+R+ KAL + +E+DG +R
Sbjct: 123 YIQHYIHLLDKITVMTVDPGYAGQPFIPEMVEKVRELKALKQQHGYHYLIEIDGSCNTRT 182
Query: 183 IKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
L+ AGA++L+VG+S FN +++ A ++
Sbjct: 183 YHQLIGAGAEVLIVGTSGLFNIHDDLATAWKM 214
>gi|317052964|ref|YP_004119318.1| Ribulose-phosphate 3-epimerase [Pantoea sp. At-9b]
gi|316953291|gb|ADU72762.1| Ribulose-phosphate 3-epimerase [Pantoea sp. At-9b]
Length = 230
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 5/201 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PS++ + + ++++ + A +H D+MDG +V NI+ I +R ++
Sbjct: 4 QISPSLMCMNLMEIKQQLA-VLDTRADFLHIDIMDGHYVKNITLSPFFIEQIRPHTKVAL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ I +IA AG D I H E+ + R + I ++GKK GV +NP TPV+
Sbjct: 63 DVHLMVEEPTDFIEVIAKAGADYICPHAETINRDAFRVINQIRSLGKKVGVVLNPATPVS 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+ I +D I +MTV+PG+ GQ I + KI + + L + +E+DG R
Sbjct: 123 YIHHYIHLLDKITVMTVDPGYAGQPFITEMVKKIEELRDLKARHGHHYLIEIDGSCNQRT 182
Query: 183 IKSLVQAGADLLVVGSS-FFN 202
++L++AGA++L+VG+S FN
Sbjct: 183 YRTLLEAGAEVLIVGTSGLFN 203
>gi|297618736|ref|YP_003706841.1| ribulose-phosphate 3-epimerase [Methanococcus voltae A3]
gi|297377713|gb|ADI35868.1| ribulose-phosphate 3-epimerase [Methanococcus voltae A3]
Length = 220
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 121/219 (55%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+A++ + EE+ +A H D+MDG FVPN+S G V L+ +
Sbjct: 2 VMIGASILSANYGHMAEEVRRAEEAKVDFFHVDIMDGHFVPNLSMGLKVPEYLQDITHGT 61
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + D I IA+A D+++FH E++ + R++ I G K VA+NP T +
Sbjct: 62 KIDVHLMVENPDIFIPKIAEA-SDMVSFHAEATKFLFRTVDLIADNGAKPIVALNPSTSI 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSR 181
+ +E V++ + +LIMTV PGF GQ I + KI + K LI + VDGG+ +
Sbjct: 121 SNIEYVLENLYGVLIMTVEPGFSGQSFINPMLKKIDKLKNLILTEGYDTKIFVDGGINTT 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V+AGAD L+ S+ + G+ K + DL+ SA
Sbjct: 181 TAPKVVEAGADALIAASAIY---GKDDVVKAVQDLRASA 216
>gi|217033855|ref|ZP_03439280.1| hypothetical protein HP9810_877g59 [Helicobacter pylori 98-10]
gi|216943753|gb|EEC23196.1| hypothetical protein HP9810_877g59 [Helicobacter pylori 98-10]
Length = 205
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 18 RLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSH 77
L +EI +++ A +H DVMDG +VPN++ G V+ + S D HLM+ +
Sbjct: 2 HLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLEKVTKMSKVPLDVHLMVENASFF 59
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+ + A II+ H E+ H R L+ I G G+ +NP T L+ +++ + ++L
Sbjct: 60 VGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEESLKYLLESVGLVL 119
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLV 195
+M+VNPGFGGQ+ ++ + K + K LI + S LEVDGGV +NI L QAG D++V
Sbjct: 120 LMSVNPGFGGQKFLDLVLEKCLKVKELIKHYNPSCLLEVDGGVNDKNIFELQQAGVDVVV 179
Query: 196 VGSSFFNQK 204
GS F K
Sbjct: 180 SGSYIFKSK 188
>gi|309777957|ref|ZP_07672899.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914246|gb|EFP60044.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 221
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSI+ + K IHFD+MDG +V N+ G + + ++
Sbjct: 3 IKISPSIMCCRIEEYKPYLELFEKVQLDSIHFDIMDGTYVKNVMLGTPIYKDIKRLCKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M + ++ D I+FHPE++ + L+TI G K G+ +NP TP+
Sbjct: 63 VDIHIMSYRPEEYMEYYDIQPGDRISFHPETTAQPYKLLQTIRDKGCKAGLVLNPGTPLT 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
LE+ ID ID + +MTVNPGF GQ+++ KI++ + L+ ++I + VDG T N
Sbjct: 123 YLEECIDLIDYVTLMTVNPGFAGQKMVPDAPQKIKRVRTLLDAYGKAIDIVVDGNTTLEN 182
Query: 183 IKSLVQAGADLLVVGSS 199
+ + AGA+ VVG+S
Sbjct: 183 SRIMRDAGANAFVVGTS 199
>gi|309795898|ref|ZP_07690312.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 145-7]
gi|308120559|gb|EFO57821.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 145-7]
gi|323162144|gb|EFZ48010.1| ribulose-phosphate 3 epimerase family protein [Escherichia coli
E128010]
Length = 222
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I K G+ +NPETPV ++ I +
Sbjct: 61 QDYIAQLARAGADFITLHPETINGQAFRLIDEIRCHDMKVGLILNPETPVEAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AGA
Sbjct: 121 DKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I A R+
Sbjct: 181 DVFIVGTSGLFNHAENIDEAWRI 203
>gi|154344014|ref|XP_001567951.1| ribulose-5-phosphate 3-epimerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065285|emb|CAM40713.1| putative ribulose-5-phosphate 3-epimerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 255
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 126/223 (56%), Gaps = 9/223 (4%)
Query: 7 IVPSILAADFSRLGEEISN-ITKAGA--KQIHFDVMDGCFVPNISFGADVIRSLRS-YSD 62
I PSILAADF +LG+E+++ I+ AG + IH DVMDG VPNIS G V+ SLR+ + +
Sbjct: 30 IDPSILAADFCQLGDEVASVISPAGGAVEWIHVDVMDGHMVPNISIGPGVVSSLRARFPN 89
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD H M+S + +IA AG TFH E++ + + I A G + GVA+ P T
Sbjct: 90 VFFDVHCMVSDPKQWVPVIAKAGGSGYTFHIEATDDSKGLAKLIRAHGMQVGVAVKPATN 149
Query: 123 VAI-LEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ L+++I+ +D +L+MTV PGFGGQ + + I + + +++ VDGG+
Sbjct: 150 LTQELKELIEGCYVDQVLVMTVEPGFGGQSFMAERLCFIAELRH--NYPHLNIGVDGGIG 207
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGA++L+ G+S F + + L KS ++
Sbjct: 208 PGTAEQAADAGANILIAGTSVFKASDRKAAIEELRASAKSGIS 250
>gi|291457427|ref|ZP_06596817.1| D-allulose-6-phosphate 3-epimerase [Bifidobacterium breve DSM
20213]
gi|291381262|gb|EFE88780.1| D-allulose-6-phosphate 3-epimerase [Bifidobacterium breve DSM
20213]
Length = 255
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 110/202 (54%), Gaps = 4/202 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT IQ+ PS++ D + E+I+ + H DVMDG FVPNI+ + +R
Sbjct: 18 MTRKIQLSPSLMTMDLDQFKEQITFLNDK-VNSFHIDVMDGHFVPNITLSPWFVEQVRKI 76
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINP 119
SD H+M+ ++ + + CD I F E + + S+ IHA G K G +NP
Sbjct: 77 SDVPMSAHMMVMDAPFWVDRLIEVKCDYICFPSEVANGVAFSMIDKIHAAGLKAGAVLNP 136
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
ET + +++ ID +D I IMT++PGF GQ+ +EST+ KI + +AL ++ + +E+DG
Sbjct: 137 ETSIDVIKPYIDLLDKITIMTIDPGFAGQRFLESTLDKIVELRALREEKGYNYEIEMDGS 196
Query: 178 VTSRNIKSLVQAGADLLVVGSS 199
+ K + A D+ V+G S
Sbjct: 197 TNKAHWKMISDANPDVYVIGRS 218
>gi|300932078|ref|ZP_07147372.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 187-1]
gi|300946676|ref|ZP_07160933.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300957486|ref|ZP_07169698.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 175-1]
gi|301644100|ref|ZP_07244111.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 146-1]
gi|312974113|ref|ZP_07788284.1| ribulose-phosphate 3 epimerase family protein [Escherichia coli
1827-70]
gi|300315796|gb|EFJ65580.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 175-1]
gi|300453655|gb|EFK17275.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300460169|gb|EFK23662.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 187-1]
gi|301077539|gb|EFK92345.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 146-1]
gi|310331647|gb|EFP98903.1| ribulose-phosphate 3 epimerase family protein [Escherichia coli
1827-70]
gi|315617464|gb|EFU98070.1| ribulose-phosphate 3 epimerase family protein [Escherichia coli
3431]
gi|323935495|gb|EGB31828.1| ribulose-phosphate 3-epimerase [Escherichia coli E1520]
gi|323940271|gb|EGB36464.1| ribulose-phosphate 3-epimerase [Escherichia coli E482]
gi|323960399|gb|EGB56035.1| ribulose-phosphate 3-epimerase [Escherichia coli H489]
gi|323969856|gb|EGB65136.1| ribulose-phosphate 3-epimerase [Escherichia coli TA007]
gi|324017183|gb|EGB86402.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 117-3]
Length = 222
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I K G+ +NPETPV ++ I +
Sbjct: 61 QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AGA
Sbjct: 121 DKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I A R+
Sbjct: 181 DVFIVGTSGLFNHAENIDEAWRI 203
>gi|328465646|gb|EGF36866.1| ribulose-phosphate 3-epimerase [Lactobacillus helveticus MTCC 5463]
Length = 216
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 112/215 (52%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E I G + H D+MDG FV N+SFG +I R +
Sbjct: 3 IAPSILNADNLNLKENIKEAVAVGIDRFHIDIMDGHFVHNLSFGPQLISDFKREFPMIDA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H M ++ D I AG DI+ H S + L + + G +T +AI P+
Sbjct: 63 EIHFMSNNPDDLIPAFVAAGADIMELHYGAMSESKLNYWLDYLASNGVETVLAIKPDVQA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++E + +I +L+MTVNPGFGGQ I + KI+Q + ++G ++ +EVDGG+ R I
Sbjct: 123 DVIEKFLPKIKQVLVMTVNPGFGGQSFIADSAEKIKQVREIVGP-NMPIEVDGGINDRTI 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K AGAD+ VVGS + + ++L + K
Sbjct: 182 KIAKDAGADVFVVGSYLYKNGNITNQVRKLEKIIK 216
>gi|291532019|emb|CBK97604.1| ribulose-phosphate 3-epimerase [Eubacterium siraeum 70/3]
Length = 215
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 3/198 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I S+LA+D + + +EI A + +H DVMDG FV NI++G +V+ ++R S+ FD
Sbjct: 5 ISASMLASDLTNIEKEIRRTENAQIEWLHIDVMDGVFVDNITYGNNVVAAMRKVSNIYFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ + I + A AG +++T H ES +L+ I G G+AI P T +
Sbjct: 65 THLMVTDPTNLIPLFALAGSNMLTIHLESKGDTTANLKYIKKSGMNAGLAIKPATDWKEV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSRNI 183
+ DM+L+MTV PG+GGQ I K+ + G ++++VDGG+ +
Sbjct: 125 IPYLPLCDMVLVMTVEPGYGGQGFIPQCADKVAMLRKYCNENGFDKMNIQVDGGINTATA 184
Query: 184 KSLVQAGADLLVVGSSFF 201
++ AGA++LV G+ F
Sbjct: 185 ATVKDAGANVLVAGTYLF 202
>gi|254478107|ref|ZP_05091490.1| Ribulose-phosphate 3 epimerase family protein [Carboxydibrachium
pacificum DSM 12653]
gi|214035969|gb|EEB76660.1| Ribulose-phosphate 3 epimerase family protein [Carboxydibrachium
pacificum DSM 12653]
Length = 226
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 123/221 (55%), Gaps = 2/221 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PS+ +AD L E + + K G K++H D+ DG FVPNI+FG I+ LR +D +
Sbjct: 1 MKIIPSLASADQVCLKEMVERLEKLGLKELHLDIEDGNFVPNITFGLKTIKDLRKITDML 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F HLM ++ + + + G + H E+ + + + ++G K GVA+NP+T
Sbjct: 61 FHIHLMTNNPEKYFYELKSIGVTSVAVHIEAVEYPKWIINFGKSLGFKIGVALNPKTLPD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E +ID++D ILIMT P + GQ+ I KI + K + VDGG+T +
Sbjct: 121 VVEYIIDDVDFILIMTSEPDYTGQKFIFPIFKKISILSQM-KKEWQEIWVDGGITLEILP 179
Query: 185 SLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLKKSALAID 224
+++ D++V+G + F ++K E + N L+ S + ++
Sbjct: 180 KILEKKVDVIVLGRALFEDEKLEDHFGTIKNILEGSKIKVE 220
>gi|260662435|ref|ZP_05863330.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum 28-3-CHN]
gi|260553126|gb|EEX26069.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum 28-3-CHN]
Length = 237
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 4/202 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT IQ+ PS++ D + E+I+ + H D+MDG FVPNI+ I+ +R
Sbjct: 1 MTRQIQLSPSLMTMDLDQFKEQITFLNDK-VNSYHIDIMDGHFVPNITLSPWFIQEVRKI 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINP 119
SD HLM++ + + D C++I E + R + IH G K G+ +NP
Sbjct: 60 SDVPMSAHLMVTDPTFWVQELVDIQCEMICIPAEVVNGVAFRLIDQIHDAGLKAGMVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
ETPV+ LE ID +D + IMTV+PGF GQ+ +E T+ KI + L ++ +E+DG
Sbjct: 120 ETPVSALEPYIDLLDKVTIMTVDPGFAGQRFLEKTLDKITTLRELREEKGYHYEIEMDGS 179
Query: 178 VTSRNIKSLVQAGADLLVVGSS 199
++ K + A D+ ++G S
Sbjct: 180 TNKKHWKMISDANPDVYIIGRS 201
>gi|149006682|ref|ZP_01830368.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae SP18-BS74]
gi|169834465|ref|YP_001695011.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|225859373|ref|YP_002740883.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae 70585]
gi|225861447|ref|YP_002742956.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298229884|ref|ZP_06963565.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255070|ref|ZP_06978656.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307127826|ref|YP_003879857.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
670-6B]
gi|147761597|gb|EDK68561.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae SP18-BS74]
gi|168996967|gb|ACA37579.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|225720406|gb|ACO16260.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae 70585]
gi|225727564|gb|ACO23415.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|306484888|gb|ADM91757.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
670-6B]
gi|327389800|gb|EGE88145.1| putative ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
GA04375]
gi|332072785|gb|EGI83266.1| ribulose-phosphate 3 epimerase family protein [Streptococcus
pneumoniae GA17545]
gi|332073951|gb|EGI84429.1| ribulose-phosphate 3 epimerase family protein [Streptococcus
pneumoniae GA41301]
gi|332200175|gb|EGJ14248.1| ribulose-phosphate 3 epimerase family protein [Streptococcus
pneumoniae GA47368]
Length = 231
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 6/199 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+ PS++ D + E+I+ + A H D+MDG FVPNI+ I+ ++ SD+
Sbjct: 4 IEFSPSLMTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNITLSPWFIQEVQKISDTP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
HLM++ ++ + D C+ I H E + R + IH G K GV +NPETPV
Sbjct: 63 LSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNPETPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTS 180
+ + ID +D + IMTV+PGF GQ+ +EST+ KI RQ + G I +E+DG +
Sbjct: 123 STIFPYIDLLDKVTIMTVDPGFAGQRFLESTLYKIQELRQLRVQNGYHYI-IEMDGSSSR 181
Query: 181 RNIKSLVQAGADLLVVGSS 199
+ K + AG D+ V+G S
Sbjct: 182 KTFKQIDVAGPDIYVIGRS 200
>gi|83273918|ref|XP_729609.1| D-ribulose-5-phosphate 3-epimerase [Plasmodium yoelii yoelii str.
17XNL]
gi|23487897|gb|EAA21174.1| putative D-ribulose-5-phosphate 3-epimerase [Plasmodium yoelii
yoelii]
Length = 227
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 126/209 (60%), Gaps = 13/209 (6%)
Query: 3 PSIQ--IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
P I+ I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ +
Sbjct: 2 PKIEAIIAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKF 61
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSL---RTIHAMGKKTGV 115
++++ FD HLM+ + + +++++ + + +TFH E+ + I + + + I + G+
Sbjct: 62 TNNIFFDVHLMVENPEKYVSLLKTS--NQLTFHFEALNEDIEKCIELAKIIKSNNMWCGI 119
Query: 116 AINPETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
++ P+T V L +ID ID +L+MTV PGFGGQ + + K+ + ++++++
Sbjct: 120 SLKPKTSVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQ 177
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
VDGG+ + GA+++V G+S FN
Sbjct: 178 VDGGLNIETTEISASHGANIIVAGTSIFN 206
>gi|319935399|ref|ZP_08009836.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. 29_1]
gi|319809615|gb|EFW06028.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. 29_1]
Length = 216
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 1/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A F L +E+ ++ +AG H DVMDG FVPN G I + + D
Sbjct: 5 LCPSMMCAQFGNLEKEVKDLEEAGIDIFHLDVMDGNFVPNFGMGLQDIEFIVKQATVPCD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +I+ A+ G II H E+ HI R+L+ I G +G+AINP T +
Sbjct: 65 VHLMVNKASDYISKFAEMGVQIIYVHSENDCHITRTLQMIKDTGICSGLAINPGTSFESI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++V+ +D +L+M+VNPGF GQ+ + K++Q + + +DG + I++L
Sbjct: 125 KEVLTLVDYVLVMSVNPGFSGQKYLSFVDEKLKQLCEKKKQYGYKVMLDGACSPERIETL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ G D ++G+S K E +Y + + +L++
Sbjct: 185 SKIGVDGFILGTSALFGK-EKNYQEIIPELRQ 215
>gi|157875019|ref|XP_001685917.1| ribulose-5-phosphate 3-epimerase [Leishmania major strain Friedlin]
gi|68128990|emb|CAJ06401.1| putative ribulose-5-phosphate 3-epimerase [Leishmania major strain
Friedlin]
Length = 262
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 122/222 (54%), Gaps = 9/222 (4%)
Query: 7 IVPSILAADFSRLGEEISNI-TKAGA--KQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSILAADF +LG+E++++ + AG + IH DVMDG VPNIS G V+ SLR+ +
Sbjct: 30 IDPSILAADFCKLGDEVASVVSPAGGAVEWIHVDVMDGHMVPNISIGPGVVSSLRARFPN 89
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VF D H M+S + IA AG TFH E++ + I A G + GVA+ P T
Sbjct: 90 VFLDVHCMVSDPKQWVPSIAKAGGSGYTFHIEATNDSKGVAEHIRAHGMQVGVAVKPATN 149
Query: 123 VAI-LEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ L D+I+ +D +L+MTV PGFGGQ I+ + I + + +++ VDGG+
Sbjct: 150 LTQELRDLIEGHYVDQVLVMTVEPGFGGQSFIQERLSFISELRR--NYPHLNIGVDGGIG 207
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
AGA++L+ G+S F + + L KS +
Sbjct: 208 PSTAVQAADAGANILIAGTSVFRAGDRKAAIEELRASAKSGI 249
>gi|189241698|ref|XP_970643.2| PREDICTED: similar to DNA replication licensing factor MCM2
[Tribolium castaneum]
Length = 947
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 108/193 (55%), Gaps = 3/193 (1%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVFDCHLMISSIDSHINIIADAGCDI 88
GA +H DVMDG FVPN+S G V++ LR+ + F+ H+M+S + +A+AG +
Sbjct: 662 GADYLHLDVMDGHFVPNLSIGHPVVKCLRNKIRTAFFETHMMVSEPGKWVEPMAEAGVNQ 721
Query: 89 ITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ 148
TFH E + R + G + G+A+ P T + + ID DMILIMTV PGFGGQ
Sbjct: 722 YTFHIEPVKDVIPLCRKVREAGMQVGLALKPGTGIEAVRQYIDHADMILIMTVEPGFGGQ 781
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ + +PK++ + + +EVDGGV I + +AGA+++V G++ N + +
Sbjct: 782 KFMGEMMPKVQWLRH--NYPGLDIEVDGGVGLNTITACAEAGANMIVSGTAIINANDQKA 839
Query: 209 YAKRLNDLKKSAL 221
L + +S++
Sbjct: 840 VIASLRETVESSI 852
>gi|253741907|gb|EES98766.1| Ribulose-phosphate 3-epimerase [Giardia intestinalis ATCC 50581]
Length = 241
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 114/219 (52%), Gaps = 25/219 (11%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PSIL+ADFS+LG+E + GA +H DVMDG FVPN++ G VI SL + F
Sbjct: 4 IAPSILSADFSKLGQEAQEVLSYGADWLHVDVMDGSFVPNLTIGPPVISSLHAALPHAFL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE--------SSPHIRRS-------------LR 104
DCH M + + A AG TFH E S+P+I +
Sbjct: 64 DCHFMTKDPEFWLPATAKAGASTFTFHIEAPSVRSGRSTPYIEPDEDMATITAACVALVT 123
Query: 105 TIHAMGKKTGVAINPETPVAILED-VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I + G K G++I P+TPV+++ D ++ +D++L+MTV PGFGGQ+ I K Q +
Sbjct: 124 KIKSYGLKAGLSIKPKTPVSVISDELLKSLDLVLLMTVEPGFGGQKYIPEAAEKAVQLRK 183
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
G + +EVDGG++ I G D+ V GS F
Sbjct: 184 RRG--DLLIEVDGGISDATIGHACSCGIDVFVAGSYIFG 220
>gi|57168587|ref|ZP_00367720.1| ribulose-phosphate 3-epimerase [Campylobacter coli RM2228]
gi|57020092|gb|EAL56769.1| ribulose-phosphate 3-epimerase [Campylobacter coli RM2228]
Length = 181
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 103/181 (56%), Gaps = 5/181 (2%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
MDG FVPN++FG VI + + ++ D HLM+ + +++ I+FH ES H
Sbjct: 1 MDGHFVPNLTFGPCVIEKISTITEIPLDVHLMVKDVGKFVDLFIPIKPKFISFHIESEAH 60
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
R I + G + +NP TP+ ++ +ID +DM+L+M+VNPGFGGQ+ + KI
Sbjct: 61 PIRLCEYIRSQGIHPAIVLNPHTPINSIKHMIDFVDMVLLMSVNPGFGGQKFLPLVYDKI 120
Query: 159 RQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ + LI +++ + +EVDGGV N L AGAD+LV GS F+ Y ++ L
Sbjct: 121 KELRRLIDEKNAKVFIEVDGGVNGLNASDLEAAGADILVAGSYIFSSN---DYKTSISSL 177
Query: 217 K 217
K
Sbjct: 178 K 178
>gi|258507394|ref|YP_003170145.1| allulose-6-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
gi|257147321|emb|CAR86294.1| Ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
gi|259648750|dbj|BAI40912.1| allulose-6-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
Length = 229
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 7/223 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQ PS++ + ++ GEE+ ++ H D+MDG +V N+S I+ +R +
Sbjct: 3 NIQFSPSLMTMNLNQFGEELKFLSTK-VDSFHIDIMDGHYVKNLSLSPWFIQEVRKVTSL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+ +N + + C+ I H E I R + IH G K GV +NPETP
Sbjct: 62 PLSAHLMVEDPAFWVNQLINLKCEWICMHIEVLNGIAFRLIDQIHEAGLKAGVVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V+ + VID +D I IMTV+PGF GQ+ IE + KI K + + +E+DG
Sbjct: 122 VSTILPVIDLVDKITIMTVDPGFAGQRFIEEALSKIVDLKEIRSEHHYDYLIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKG--EISYAKRLNDLKKSA 220
RN + +AG D+ +VG S F E+S+ K D + S
Sbjct: 182 RNFPRIAEAGPDIYIVGRSGLFGLTNNIEMSWGKMTQDFQDST 224
>gi|223983522|ref|ZP_03633707.1| hypothetical protein HOLDEFILI_00988 [Holdemania filiformis DSM
12042]
gi|223964517|gb|EEF68844.1| hypothetical protein HOLDEFILI_00988 [Holdemania filiformis DSM
12042]
Length = 209
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 116/212 (54%), Gaps = 3/212 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSI +AD R+ EE+ I G ++H D+ DG F+PNI+FG +R L D V
Sbjct: 1 MKVYPSIASADPLRIAEELDKIR--GHPRVHVDIEDGNFLPNITFGQKTVRKLMQNPDFV 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+D HL+ + + I+D I FH E+S + R + I MG K G+A+N +T +
Sbjct: 59 YDLHLLTTRPYEFLQQISDCHFSHICFHFEASAYPLREINLIRKMGAKPGIALNFKTGIR 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L + +I+ +LIMT P ++ S + K+++A+ + +++ + DGG+ NI
Sbjct: 119 ELTPFLSQIEYLLIMTAEPDGEEEKFQSSMLEKMKEAREYL-PQNVEIWADGGINEGNIY 177
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L +AGAD +++G + +N + +R +
Sbjct: 178 QLKEAGADAMIMGRAVWNCDNPLESIRRFEKI 209
>gi|68006356|ref|XP_670336.1| D-ribulose-5-phosphate 3-epimerase [Plasmodium berghei strain ANKA]
gi|56485495|emb|CAI02797.1| D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium berghei]
Length = 227
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 126/209 (60%), Gaps = 13/209 (6%)
Query: 3 PSIQ--IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
P I+ I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ +
Sbjct: 2 PKIEAIIAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKF 61
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSL---RTIHAMGKKTGV 115
++++ FD HLM+ + + +++++ + + +TFH E+ + I + + + I + G+
Sbjct: 62 TNNIFFDIHLMVENPEKYVSLLKTS--NQLTFHFEALNEDIEKCIELAKIIKSNNMWCGI 119
Query: 116 AINPETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
++ P+T V L +ID ID +L+MTV PGFGGQ + + K+ + ++++++
Sbjct: 120 SLKPKTSVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQ 177
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
VDGG+ + GA+++V G+S FN
Sbjct: 178 VDGGLNIETTEISASHGANIIVAGTSIFN 206
>gi|16802542|ref|NP_464027.1| hypothetical protein lmo0499 [Listeria monocytogenes EGD-e]
gi|224502200|ref|ZP_03670507.1| hypothetical protein LmonFR_06717 [Listeria monocytogenes FSL
R2-561]
gi|16409875|emb|CAC98578.1| lmo0499 [Listeria monocytogenes EGD-e]
Length = 222
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ + + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +++ A ++FH E+S + ++ I +G + +AI+P+T + +
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHLEASRDVNATINHIRELGIRPSIAISPDTEIEQI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ ++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + ++
Sbjct: 124 YPFLGKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVR 183
Query: 185 SLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
L GAD+ VVG+ + FN+K SY ++L L++
Sbjct: 184 LLEPIGADVYVVGTAALFNEKAG-SYTEKLAPLRE 217
>gi|239625229|ref|ZP_04668260.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47_FAA]
gi|239519459|gb|EEQ59325.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47FAA]
Length = 236
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 119/218 (54%), Gaps = 5/218 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS++ D L ++ + ++G + +H D++DG F P++ G + ++ LR +D F+
Sbjct: 12 ISPSLICLDLCNLEQQAKLVEESGIQMLHVDILDGHFSPSMPLGLETVKQLRKKTDLEFE 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M S+ I+ + + G I FH E++ H+ L IH G + GVA+ P TP+ +L
Sbjct: 72 AHVMTSNPQYFIDELLECGVSQIVFHIETADHVDGLLNYIHGKGVRAGVALKPGTPLTVL 131
Query: 127 EDVIDEIDMILIMTVNPGF---GGQQLIESTIPKIRQAKALIGKRSISLEV--DGGVTSR 181
+ V+D+ D +L+M +NPGF G+ + KIR + +I R + + DG ++ +
Sbjct: 132 DYVLDKCDAVLLMLINPGFAQCAGEAQVSYGDRKIRDLRKMIDHRGLDTRIILDGRISPK 191
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI+ + A++ V GS+ + K +NDL ++
Sbjct: 192 NIEDYGRGIANIFVAGSTCIKKDDLAGSLKAVNDLAQT 229
>gi|322494658|emb|CBZ29960.1| putative ribulose-5-phosphate 3-epimerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 255
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 126/222 (56%), Gaps = 9/222 (4%)
Query: 7 IVPSILAADFSRLGEEISNI-TKAGA--KQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSILAADF +LG+E++++ + AG + IH DVMDG VPNIS G V+ SLR + +
Sbjct: 30 IDPSILAADFCKLGDEVASVVSPAGGAVEWIHVDVMDGHMVPNISMGPGVVSSLREHFPN 89
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+F D H M+S+ + + +A AG TFH E++ + + I A G + GVA+ P
Sbjct: 90 LFLDVHCMVSNPEQWVPSMAKAGGSGYTFHIEATNDSKGVAKHIRAHGMQVGVAVKPAAN 149
Query: 123 VAI-LEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ L+++I+ +D +L+MTV PGFGGQ I+ + I + + +++ VDGG+
Sbjct: 150 LTQELKELIEGHYVDQVLVMTVEPGFGGQSFIQERLSFISELRR--NYPHLNIGVDGGIG 207
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ AGA++L+ G+S F + + L KS +
Sbjct: 208 PGTAEQAADAGANILIAGTSVFKAGDRKAVIEELRASAKSGI 249
>gi|328477233|gb|EGF47425.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus MTCC 5462]
Length = 158
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 92/152 (60%)
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+S +FD H+M++ + H+ G ++++ H ES+PH+ L+ I G+K G+ +NP
Sbjct: 1 HSKMIFDIHMMLAHPEDHLEATLATGAEMLSVHYESTPHVHWVLQQIKQAGRKAGIVLNP 60
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP +L ++DEID +L+M++NPG GQ + + KIR+ K +IG+R I +EVDGGV
Sbjct: 61 GTPETVLPYLLDEIDYVLVMSINPGRPGQSFLPLALDKIRRVKQMIGERPIQIEVDGGVN 120
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ AGADLLVVG F + YAK
Sbjct: 121 DVHAAEAKAAGADLLVVGGFLFGKDPHAQYAK 152
>gi|150399191|ref|YP_001322958.1| ribulose-phosphate 3-epimerase [Methanococcus vannielii SB]
gi|150011894|gb|ABR54346.1| Ribulose-phosphate 3-epimerase [Methanococcus vannielii SB]
Length = 218
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + EE+ A H D+MDG FVPN+S G V L+ +D
Sbjct: 2 VMIGASILSADYGNMSEEVKKAENAKIDFFHVDIMDGHFVPNLSLGLSVPMDLKKITDFP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + I +A +++ FH ES+ ++ +++ I G K +A+NP T +
Sbjct: 62 LDVHLMVENPEKFIPKVA-GYAEMVAFHAESTKYLFKTIDLIKEYGAKPIIALNPSTTID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRN 182
LE V+DE+ +L+M+V PGF GQ I + KI K I + + VDGG+
Sbjct: 121 CLEYVLDELYGVLVMSVEPGFSGQSFINPMVKKIDVLKKKITSENYDTKIFVDGGINVNT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+V GAD L+ S+ + K +I+ A +N+L+ S
Sbjct: 181 APKVVAVGADALIAASAIYG-KEDINSA--VNELRNS 214
>gi|308161906|gb|EFO64338.1| Ribulose-phosphate 3-epimerase [Giardia lamblia P15]
Length = 241
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PSIL+ADFS+LG+E + GA +H DVMDG FVPN++ G VI SL + F
Sbjct: 4 IAPSILSADFSKLGQEAQEVLNCGADWLHVDVMDGNFVPNLTIGPPVISSLHAAVPHAFL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--------SPHIR-------------RSLR 104
DCH M + + A AG TFH E+ SP+I R ++
Sbjct: 64 DCHFMTVDPEFWVPSAAKAGVSTFTFHIEAPSVRSGKNSPYIEPDEDIEAINIACVRLVK 123
Query: 105 TIHAMGKKTGVAINPETPVAILED-VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I G K G++I P+TPV+++ D ++ +D++L+MTV PGFGGQ+ I + Q K
Sbjct: 124 KIKEHGLKAGLSIKPKTPVSVIGDELLKILDLVLLMTVEPGFGGQKYIPEAAERAIQLKE 183
Query: 164 LIGKRS-ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+RS + +EVDGG++ I G D+ V GS F I
Sbjct: 184 ---RRSDLLIEVDGGISDATIDHACSCGIDVFVAGSYIFGASDRI 225
>gi|217032956|ref|ZP_03438430.1| hypothetical protein HPB128_182g10 [Helicobacter pylori B128]
gi|216945325|gb|EEC23999.1| hypothetical protein HPB128_182g10 [Helicobacter pylori B128]
Length = 205
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 18 RLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSH 77
L +EI +++ A +H DVMDG +VPN++ G V+ + S D HLM+ +
Sbjct: 2 HLAKEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLEKVTQMSQVPLDVHLMVENASFF 59
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+ + A II+ H E+ H R L+ I G G+ +NP T ++ +++ + ++L
Sbjct: 60 VGLFAPLKPQIISIHAENEKHPHRVLQLIRNSGITPGIVLNPHTHEESIKYLLESVGLVL 119
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLV 195
+M+VNPGFGGQ+ ++ + K + K LI + S LEVDGGV +NI L QAG D++V
Sbjct: 120 LMSVNPGFGGQKFLDLVLEKCLKVKELIRHYNPSCLLEVDGGVNDKNIFELQQAGVDVVV 179
Query: 196 VGSSFFNQK 204
GS F K
Sbjct: 180 SGSYIFKSK 188
>gi|257884980|ref|ZP_05664633.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,501]
gi|257820818|gb|EEV47966.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,501]
Length = 221
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 5/199 (2%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMI 71
+ D + L I + G +H DV+DG F P++ G + I+ +R + FD H+M
Sbjct: 1 MCGDLANLEGSIQELESIGMDSLHIDVIDGSFSPSMPLGIETIKRIREITSMNFDVHIMA 60
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+ I + G + ITFH E+SPHI R ++ I G K G+A+NP TP+ +L+ ++
Sbjct: 61 KDNEFFIGEMLKIGVESITFHYETSPHIDRYIQLIKNSGTKVGIALNPATPLNVLQYILP 120
Query: 132 EIDMILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSL 186
EID I +M +NPGF ++ I + KI L+ ++ ++ ++VDG V+ I L
Sbjct: 121 EIDRICLMLINPGFATNKSEKQISYALKKITDLCQLVNEKELAVDIQVDGRVSLETIPGL 180
Query: 187 VQAGADLLVVGSSFFNQKG 205
+ AGA LV+GS+ KG
Sbjct: 181 LDAGATNLVLGSTSLFLKG 199
>gi|328955815|ref|YP_004373148.1| Ribulose-phosphate 3-epimerase [Coriobacterium glomerans PW2]
gi|328456139|gb|AEB07333.1| Ribulose-phosphate 3-epimerase [Coriobacterium glomerans PW2]
Length = 224
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 2/212 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSI+ + + I +AG +HFDVMDG +VPN+ G D ++ S
Sbjct: 1 MKQEFNIYPSIMCSAPWDVKGYIDAFERAGVAGVHFDVMDGHYVPNVMLGTDDFDAIASI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D H+M D+ ++ D FHPE+ R L I G+A++P
Sbjct: 61 TELSLDVHIMAEGADAFVSFFKLRPHDRCCFHPETCAQPYRLLERIRRRASACGLALSPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV + + ++ +D +L+M V+PGF GQ ++ + K+++ + L+ + I + +DG
Sbjct: 121 TPVGYVTECLELLDFVLVMAVSPGFAGQTMVADHLNKVKRIRELVRRADHPIEIVIDGNT 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
T N + +++AGA+ VVG+S +G +A
Sbjct: 181 TVANARRMIEAGANGFVVGTSSLMGEGPAGFA 212
>gi|104773651|ref|YP_618631.1| ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103422732|emb|CAI97361.1| Ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 216
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 8/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 3 IAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDLTA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PH-IRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM +++ + AG D I H E+ P+ I L + G G+ ++P+T +
Sbjct: 63 EVHLMSNNLPDLLPAFVKAGSDFIEIHYEADYPNLIAHWLDYLKENGVSCGLVLSPDTDI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+LE D++D +L+MTV PGFGGQ+ +E +I+ A+A++ + +EVDGG+ ++
Sbjct: 123 KVLERYKDKLDQVLLMTVYPGFGGQKFMEEAAARIKAARAIL--PDLPIEVDGGINAQTA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGAD+ V GS F G S AK++ +L
Sbjct: 181 EIAKEAGADVFVAGSYIF---GRDSVAKQVAEL 210
>gi|116513645|ref|YP_812551.1| Pentose-5-phosphate-3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116092960|gb|ABJ58113.1| ribulose-5-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325125295|gb|ADY84625.1| Ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 216
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 8/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 3 IAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDLTA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PH-IRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM +++ + AG D I H E+ P+ I L + G G+ ++P+T +
Sbjct: 63 EVHLMSNNLPDLLPAFVKAGSDFIEIHYEADYPNRIDHWLDYLKENGVSCGLVLSPDTDI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+LE D++D +L+MTV PGFGGQ+ +E +I+ A+A++ + +EVDGG+ ++
Sbjct: 123 KVLERYKDKLDQVLLMTVYPGFGGQKFMEEAAARIKAARAIL--PDLPIEVDGGINAQTA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGAD+ V GS F G S AK++ +L
Sbjct: 181 EIAKEAGADVFVAGSYIF---GRDSVAKQVAEL 210
>gi|167755419|ref|ZP_02427546.1| hypothetical protein CLORAM_00933 [Clostridium ramosum DSM 1402]
gi|237733649|ref|ZP_04564130.1| ribulose-phosphate 3-epimerase [Mollicutes bacterium D7]
gi|167704358|gb|EDS18937.1| hypothetical protein CLORAM_00933 [Clostridium ramosum DSM 1402]
gi|229383247|gb|EEO33338.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. D7]
Length = 216
Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 1/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A+F L EI + ++G H DVMDG FVPN G I + ++ D
Sbjct: 5 LCPSMMCANFGNLENEIRKLEESGIDIFHLDVMDGSFVPNFGMGLQDIEYICKTANKPCD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A G II HPES HI R+L+ I G + G+ +NP T +
Sbjct: 65 VHLMVVNPGAYVKKFAQLGVKIIYVHPESDVHITRTLQMIKDAGAQAGIVVNPGTSYESV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++ + +D +++M+VNPGF GQ+ + K +Q A + + +DG + I L
Sbjct: 125 KETLSLVDYVMVMSVNPGFAGQKYLNFVDDKFKQFCAKKEEFGYKVMIDGACSPERIAML 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G + ++G+S K E SY + + +L+
Sbjct: 185 SSIGVEGFILGTSALFGK-EKSYQEIIKELR 214
>gi|255028444|ref|ZP_05300395.1| hypothetical protein LmonL_03076 [Listeria monocytogenes LO28]
Length = 135
Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 88/137 (64%), Gaps = 4/137 (2%)
Query: 85 GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG 144
G +IT H E++ H+ R+++ I + G + GV +NP TP + LE V+D+ID IL+MTVNPG
Sbjct: 1 GAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPG 60
Query: 145 FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
GGQ+ +S++ KIR+ KA IG R I +EVDGGV K AGADL+VVGS F +
Sbjct: 61 LGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKECTLAGADLIVVGSYLF--E 118
Query: 205 GEISYAKRLNDLKKSAL 221
G+I L L K L
Sbjct: 119 GDIE--ANLEKLAKGVL 133
>gi|301800439|emb|CBW33073.1| Ribulose-6-phosphate epimerase [Streptococcus pneumoniae OXC141]
Length = 248
Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+ PS++ D + E+I+ + A H D+MDG FVPNI+ I+ ++ SD+
Sbjct: 21 IEFSPSLMTMDLDKFKEQITFLNDKVA-SYHIDIMDGHFVPNITLSPWFIQEVQKISDTP 79
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
HLM++ ++ + D C+ I H E + R + IH G K GV +NPETPV
Sbjct: 80 LSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNPETPV 139
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTS 180
+ + ID +D IMTV+PGF GQ+ +EST+ KI RQ + G I +E+DG +
Sbjct: 140 STIFPYIDLLDKATIMTVDPGFAGQRFLESTLYKIQELRQLRVQNGYHYI-IEMDGSSSR 198
Query: 181 RNIKSLVQAGADLLVVGSS 199
+ K + AG D+ V+G S
Sbjct: 199 KTFKQIDVAGPDIYVIGRS 217
>gi|225857237|ref|YP_002738748.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae P1031]
gi|225725667|gb|ACO21519.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae P1031]
Length = 231
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 110/199 (55%), Gaps = 6/199 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+ PS++ D + E+I+ + A H D+MDG FVPNI+ I+ ++ SD+
Sbjct: 4 IEFSPSLMTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNITLSPWFIQEVQKISDTP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
HLM++ ++ + D C+ I H E + R + IH G K GV +NPETPV
Sbjct: 63 LSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNPETPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTS 180
+ + ID +D + IMTV+PGF GQ+ ++ST+ KI RQ + G I +E+DG +
Sbjct: 123 STIFPYIDLLDKVTIMTVDPGFAGQRFLKSTLYKIQELRQLRVQNGYHYI-IEMDGSSSR 181
Query: 181 RNIKSLVQAGADLLVVGSS 199
+ K + AG D+ V+G S
Sbjct: 182 KTFKQIDVAGPDIYVIGRS 200
>gi|261369066|ref|ZP_05981949.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
gi|282568791|gb|EFB74326.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
Length = 215
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ SILAADF+ L ++ AG H DVMDG FVP ISFG ++R++ +
Sbjct: 2 FELCASILAADFANLERDMRAANAAGVDAFHIDVMDGHFVPAISFGTGMVRTMERLTTKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + G ++ H E +LR I A G + G+ +NPETPV
Sbjct: 62 LDVHLMVEKPLDFLPELEELGVKRVSVHYEIPGGPEAALRAICAAGMQAGLVLNPETPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI-GKRSIS-LEVDGGVTSRN 182
+ +I +L+MTV+PG GGQ + + KI AK+L+ G+ S + ++VDGG+T
Sbjct: 122 SALPYLAQISQLLLMTVHPGRGGQVYLPGSNEKIAAAKSLLQGQGSNTVIQVDGGITPGT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ GA +V GS+ F K
Sbjct: 182 LPGAYATGARSIVAGSAVFGGK 203
>gi|15901453|ref|NP_346057.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae TIGR4]
gi|111657168|ref|ZP_01407946.1| hypothetical protein SpneT_02001611 [Streptococcus pneumoniae
TIGR4]
gi|148984049|ref|ZP_01817344.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae SP3-BS71]
gi|168486880|ref|ZP_02711388.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|168487297|ref|ZP_02711805.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|168487581|ref|ZP_02712089.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|14973105|gb|AAK75697.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae TIGR4]
gi|147923338|gb|EDK74451.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae SP3-BS71]
gi|183569611|gb|EDT90139.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|183569833|gb|EDT90361.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|183570217|gb|EDT90745.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
Length = 231
Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+ PS++ D + E+I+ + A H D+MDG FVPNI+ I+ ++ SD+
Sbjct: 4 IEFSPSLMTMDLDKFKEQITFLNDKVAS-YHIDIMDGHFVPNITLSPWFIQEVQKISDTP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
HLM++ ++ + D C+ I H E + R + IH G K GV +NPETPV
Sbjct: 63 LSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNPETPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTS 180
+ + ID +D IMTV+PGF GQ+ +EST+ KI RQ + G I +E+DG +
Sbjct: 123 STIFPYIDLLDKATIMTVDPGFAGQRFLESTLYKIQELRQLRVQNGYHYI-IEMDGSSSR 181
Query: 181 RNIKSLVQAGADLLVVGSS 199
+ K + AG D+ V+G S
Sbjct: 182 KTFKQIDVAGPDIYVIGRS 200
>gi|118575292|ref|YP_875035.1| transketolase, N-terminal subunit [Cenarchaeum symbiosum A]
gi|118193813|gb|ABK76731.1| transketolase, N-terminal subunit [Cenarchaeum symbiosum A]
Length = 504
Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 106/205 (51%), Gaps = 9/205 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+A D + L E+ + GA IH DVMDG FVPN +F + IR LR + + FD
Sbjct: 243 IAPSIIAGDMTDLSGEVRRCAEGGADYIHLDVMDGRFVPNKTFDHEKIRELRPITQTPFD 302
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----GVAINPETP 122
HLMI HI A+AG DIIT H E+ + IH + G+A+NP T
Sbjct: 303 THLMIDEPGRHIREYAEAGSDIITVHAEACD--SSTFGEIHDYLRDNLVGVGLAVNPGTE 360
Query: 123 V-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-RQAKALIGKRSIS-LEVDGGVT 179
+ ID ++IM+V PG GQ+ IE T K R A+ L G +E DGGVT
Sbjct: 361 LPPWAAKFAPTIDQVIIMSVVPGKSGQKYIEDTHAKASRMAEQLAGHGFEGVIEADGGVT 420
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK 204
+NI S GA V GS+ Q+
Sbjct: 421 EQNIGSCFTDGARAFVGGSAIVGQR 445
>gi|68074167|ref|XP_678998.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499633|emb|CAI04211.1| hypothetical protein PB000125.01.0 [Plasmodium berghei]
Length = 226
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 131/211 (62%), Gaps = 18/211 (8%)
Query: 3 PSIQ--IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
P I+ I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ +
Sbjct: 2 PKIEAIIAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKF 61
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSL---RTIHAMGKKTGV 115
++++ FD HLM+ + + +++++ + + +TFH E+ + I + + + I + G+
Sbjct: 62 TNNIFFDIHLMVENPEKYVSLLKTS--NQLTFHFEALNEDIEKCIELAKIIKSNNMWCGI 119
Query: 116 AINPETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
++ P+T V L +ID ID +L+MTV PGFGGQ + + K+ + ++++++
Sbjct: 120 SLKPKTSVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQ 177
Query: 174 VDGGVTSRNIKS--LVQAGADLLVVGSSFFN 202
VDGG+ NI++ + +GA+++V G+S FN
Sbjct: 178 VDGGL---NIETTEISASGANIIVAGTSIFN 205
>gi|300906411|ref|ZP_07124109.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 84-1]
gi|301302780|ref|ZP_07208909.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 124-1]
gi|300401859|gb|EFJ85397.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 84-1]
gi|300842000|gb|EFK69760.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 124-1]
gi|315253767|gb|EFU33735.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 85-1]
Length = 222
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 5/203 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 2 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+I +A AG D IT HPE+ + R + I K G+ +NPETPV ++ I +
Sbjct: 61 QDYIAQLARAGADFITLHPETINGQAFRLIDEIRCHDMKVGLILNPETPVEAMKYYIHKA 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGA 191
D I +MTV+PGF Q I + K+ + KA + + +EVDG + L+ AGA
Sbjct: 121 DKITVMTVDPGFARQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGA 180
Query: 192 DLLVVGSS-FFNQKGEISYAKRL 213
D+ +VG+S FN I A R+
Sbjct: 181 DVFIVGTSGLFNHAENIDEAWRI 203
>gi|83319620|ref|YP_424557.1| ribulose-phosphate 3-epimerase, putative [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
gi|83283506|gb|ABC01438.1| ribulose-phosphate 3-epimerase, putative [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 215
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 123/219 (56%), Gaps = 10/219 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
++IVPSI A+ L EI+N+TKA QIHFDVMDG FV N + ++ ++ + +
Sbjct: 1 MKIVPSIYCANLIDLKTEITNLTKAQINQIHFDVMDGVFVKNYALSNKLVDEIKQHFPNL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS---LRTIHAMGKKTGVAINPE 120
+ + H+M + I++ +A D +TFH + + ++ ++ I K G+A++
Sbjct: 61 IIEVHIMGIDLLDKISLFKNA--DYLTFHYNAINDLNQAKLLIKEIRKHNLKPGIALDLN 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVT 179
+ ++ +++EI+++ M++ PGF GQ+ +ST K+ K L K + ++DGGV
Sbjct: 119 NEINDIQKILNEIELVTFMSIKPGFTGQKFEDSTWNKLNLIKELKVKYPHLKFQIDGGVR 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
NIK L+ D +VVGS FN E +Y K +N +K+
Sbjct: 179 WENIKKLINCQLDWIVVGSLLFN---EDNYLKVVNKIKQ 214
>gi|269122336|ref|YP_003310513.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268616214|gb|ACZ10582.1| Ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 209
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 3/210 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PSI +A + +E+ I + +H D+ DG F+PNI+FG +R +R
Sbjct: 1 MKILPSIASASQYNIEKELGRIGSRYYENLHIDIEDGNFIPNITFGLKTVRQIRENYKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F HLM+S+ +++IN + + GC II H ES ++ L I ++G + G+A+NP + +
Sbjct: 61 FSVHLMVSNPENYINELKNTGCCIIFIHVESCRYLSEVLNKIKSLGIRAGIALNPCSDLK 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ D ++ MT P F GQ + + I +A +G++ + L VDGGV +++
Sbjct: 121 NYRYLFGITDAVMFMTSEPDFRGQIFNPAVLENIEEA---LGEKRLELWVDGGVKEEHLE 177
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L + D V+G F+++ + KR+N
Sbjct: 178 FLKKKQIDYAVMGREIFDRENPEDFLKRIN 207
>gi|303277005|ref|XP_003057796.1| sugar kinase and ribulose phosphate 3 epimerase, fused [Micromonas
pusilla CCMP1545]
gi|226460453|gb|EEH57747.1| sugar kinase and ribulose phosphate 3 epimerase, fused [Micromonas
pusilla CCMP1545]
Length = 759
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 15/213 (7%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP +I PS+LAAD L E+S + GA +H D+MDG FV N++ G V+ LR+ +
Sbjct: 522 TPVAKIAPSLLAADQGDLAGEVSRMIHDGADWLHVDIMDGHFVNNLTIGPPVVAHLRARA 581
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPE----------SSPHIRRSLRTIHAMG 110
D+ DCHL S+ S I+ +A A +TFH E ++ TI A G
Sbjct: 582 RDAFLDCHLSCSNPGSLIDGLAAARASSVTFHIEAVGGGDGDGDATSEAAALAATIRARG 641
Query: 111 KKTGVAINPETPVAILEDVI--DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
+ VA+ P TP+ + ++ D +DM+L +TV PGFGGQ+ S K+R + +
Sbjct: 642 MRAAVALKPSTPIETVFPLVDADAVDMVLCLTVEPGFGGQKFTASVCDKVRALRRRRPRL 701
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
I +VDGG+ + + AGA+++V GS+ F
Sbjct: 702 DI--QVDGGLNEDTVVAAACAGANVVVAGSAVF 732
>gi|300811393|ref|ZP_07091889.1| ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497628|gb|EFK32654.1| ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 216
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 11/211 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 3 IAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDLTA 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PH-IRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM +++ + AG D+I H E+ P+ I L + G G+ ++P+T +
Sbjct: 63 EVHLMSNNLPDLLPAFVKAGSDLIEIHYEADYPNRIDHWLDYLKENGVSCGLVLSPDTDI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+LE D++D +L+MTV PGFGGQ+ +E +IR A+A++ + +EVDGG+ ++
Sbjct: 123 KVLERYKDKLDQVLLMTVYPGFGGQKFMEEAADRIRAARAIL--PDLPIEVDGGINAQTA 180
Query: 184 KSLVQAGADLLVVGSSFF------NQKGEIS 208
+ +AGAD+ V GS F NQ E++
Sbjct: 181 EIAKEAGADVFVAGSYIFGRDSVANQVAELT 211
>gi|264658027|emb|CBH31233.1| putative ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Simulium squamosum]
Length = 148
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 95/147 (64%), Gaps = 8/147 (5%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PSIL+ADF++LGEE+ I IH DVMDG FVP I+ G DVI ++R YS FD H
Sbjct: 2 PSILSADFAKLGEEVKRIDGLNVDYIHIDVMDGNFVPKITIGPDVISAIRKYSSLPFDVH 61
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK--------KTGVAINPE 120
LMI+S +H+ +AG DIIT H E+ H+ R ++ I + + GV+I P
Sbjct: 62 LMINSPQNHVERFINAGADIITIHTETEVHLERLIKKIRSYKNINNEKKMIEVGVSIVPS 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGG 147
T ++LE +IDE+D+ILIMTVNPGFGG
Sbjct: 122 TSPSVLEYIIDELDIILIMTVNPGFGG 148
>gi|42560936|ref|NP_975387.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|42492433|emb|CAE77029.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|301321119|gb|ADK69762.1| putative ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 218
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 121/218 (55%), Gaps = 7/218 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDS 63
++IVPSI A+ L EI+N+TKA QIHFDVMDG FV N + ++ ++ + +
Sbjct: 1 MKIVPSIYCANLIDLKTEITNLTKAQINQIHFDVMDGVFVKNYALSNKLVDEIKQQFPNL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK---KTGVAINPE 120
+ + H+M + I++ +A D +TFH + + ++ I+ + K K G+A++
Sbjct: 61 IIEVHIMGIDLLDKISLFKNA--DYLTFHYNAINDLNQAKLWINEIKKYNLKPGIALDLN 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVT 179
+ ++ +++EI+++ M++ PGF GQ+ ES+ K+ K L K + ++DGGV
Sbjct: 119 NEINDIKKILNEIEVVTFMSIKPGFTGQKFEESSWTKLNLIKELKLKYPHLKFQIDGGVR 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NIK L+ D +VVGS FN+ + R+ L+
Sbjct: 179 WENIKKLIDCQLDWIVVGSLLFNENDYLKVVSRIKQLE 216
>gi|266622550|ref|ZP_06115485.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
gi|288865728|gb|EFC98026.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
Length = 232
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 2/192 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
P++ + E++ + K G K +H D+MDG +VPN+ F ++ +R + D H
Sbjct: 10 PTLACGNPLNFKEDLDILEKTGIKILHIDIMDGHYVPNLCFDTGMVGLIRKNYSFLLDVH 69
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+++ + +I +A AG D ++FH +++ R L I G K GV +NP +L +
Sbjct: 70 LMVTNPEDYIQPLAAAGADYVSFHLDATHFPIRMLNQIRENGMKGGVVLNPAQSPDLLAE 129
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
+ +D IL+M V PGF GQ+ +E T+ K+ + ++ + +S +E DGGV N +L
Sbjct: 130 TLPYLDFILVMGVEPGFSGQKFLEGTVDKVGKLDSMRKELGLSYLIEADGGVDRENTVTL 189
Query: 187 VQAGADLLVVGS 198
++ GAD LV G+
Sbjct: 190 LEHGADTLVSGA 201
>gi|159119502|ref|XP_001709969.1| Ribulose-phosphate 3-epimerase [Giardia lamblia ATCC 50803]
gi|157438087|gb|EDO82295.1| Ribulose-phosphate 3-epimerase [Giardia lamblia ATCC 50803]
Length = 241
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 118/219 (53%), Gaps = 27/219 (12%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PSIL+ADFS+LG+E + GA +H DVMDG FVPN++ G VI +L + + F
Sbjct: 4 IAPSILSADFSKLGQEAQEVLNCGADWLHVDVMDGNFVPNLTIGPPVISALHAAVPNAFL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--------SPHI-------------RRSLR 104
DCH M + I+ A AG TFH E+ SP+I R +
Sbjct: 64 DCHFMTNDPGFWISSTAKAGASTFTFHIEAPSVRSGRNSPYIDPDEDLEAINTACARLVE 123
Query: 105 TIHAMGKKTGVAINPETPVAIL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I A G K G++I P+TP +++ +D++ +D++L+MTV PGFGGQ+ I K Q K
Sbjct: 124 EIKAHGLKAGLSIKPKTPASVIGDDLLKALDLVLLMTVEPGFGGQKYIPEAAEKAIQLKK 183
Query: 164 LIGKRS-ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+RS + +EVDGG++ I G D V GS F
Sbjct: 184 ---RRSDLLIEVDGGISDATIDHACSCGIDAFVAGSYIF 219
>gi|313884605|ref|ZP_07818366.1| putative ribulose-phosphate 3-epimerase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620389|gb|EFR31817.1| putative ribulose-phosphate 3-epimerase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 220
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++V SI+ AD +G+E+ + +AG +H DVMDG FV N++ G I SL +
Sbjct: 3 KLVASIMTADQMNIGKEVQDCLEAGIDWLHCDVMDGVFVDNLAMGPYQIESLLKVEELTL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + + +I + ITFH E+ + + + I + G K G+AI+P+T
Sbjct: 63 DIHLATVTPERYIKLFGPLKPHYITFHIETVANPQACIDLIRSYGCKVGLAISPQTSFKA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTSRN 182
+ +D+ID++L+MTVNPGF GQQ + K++ I + I +EVDG + +
Sbjct: 123 VIPYMDQIDLLLVMTVNPGFAGQQFNMDVLDKLKLITEYIDTHELKHILIEVDGNIYEKT 182
Query: 183 IKSLVQAGADLLVVGSS-FFNQKGEISYAKRLNDLKK 218
I+ + DL V+G+S F G+ SY ++ + L++
Sbjct: 183 IELMKDFKVDLYVLGTSALFKDDGK-SYLEKADTLRE 218
>gi|221061399|ref|XP_002262269.1| d-ribulose-5-phosphate 3-epimerase [Plasmodium knowlesi strain H]
gi|193811419|emb|CAQ42147.1| d-ribulose-5-phosphate 3-epimerase, putative [Plasmodium knowlesi
strain H]
Length = 227
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 118/204 (57%), Gaps = 15/204 (7%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PS+LA++ S+L EE + + GA+ IH DVMD FVPN+SFG VI L+ Y+ D F
Sbjct: 8 IAPSVLASNISKLAEETQRMEELGAEWIHLDVMDMHFVPNLSFGPPVINDLKKYTKDIFF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFH----PESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ + + +++++ + D +TFH E + + + I + GV+I P+T
Sbjct: 68 DVHLMVENPEKYVDLLKTS--DQLTFHFEALNEDTDKCVKLAQQIRNNNQWCGVSIKPKT 125
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
V + ++D I+ +L+MTV PGFGGQ + + K+ A + K+ ++++VDGG
Sbjct: 126 NVEKIVPLLDTNLINTVLVMTVEPGFGGQSFMHDMMSKV----AFLRKKYTDLNIQVDGG 181
Query: 178 VTSRNIKSLVQAGADLLVVGSSFF 201
+ + GA+++V G+S F
Sbjct: 182 LNIETTEISASHGANVIVAGTSIF 205
>gi|238063932|ref|ZP_04608641.1| ribulose-phosphate 3-epimerase [Micromonospora sp. ATCC 39149]
gi|237885743|gb|EEP74571.1| ribulose-phosphate 3-epimerase [Micromonospora sp. ATCC 39149]
Length = 226
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 125/222 (56%), Gaps = 3/222 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + PSILAADF+RL EE+ + A A +H DVMD FVPN++ G V++SLR+ ++
Sbjct: 4 PPPIVAPSILAADFARLAEEVRAVEGA-ADWLHVDVMDNHFVPNLTIGLPVVQSLRAATE 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI+ ADAG +TFH E+ + + + A G + G+AI+ +TP
Sbjct: 63 LPFDVHLMITDPRRWAPGYADAGAYNVTFHAEACDNPVSLAKDLRAAGARAGLAIDRDTP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ +++ D +LIMT+ GFGGQ+ I + K+R A+ + G + +EVDGG+ +
Sbjct: 123 IEPYLELLPSFDTLLIMTIKAGFGGQRFIPELLDKVRAARRHVDAGHLELRIEVDGGIAA 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ AGAD V G++ + + + L L + A A
Sbjct: 183 DTIEQAAAAGADAFVAGTAVYGAEDPAEAVRCLRGLAERASA 224
>gi|50365039|ref|YP_053464.1| pentose-5-phosphate-3-epimerase [Mesoplasma florum L1]
gi|50363595|gb|AAT75580.1| pentose-5-phosphate-3-epimerase [Mesoplasma florum L1]
Length = 223
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 12/211 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS L+A+F+ L EI +A + IH+DVMD FVPN++FG+ V++ + + SD
Sbjct: 4 ITIAPSFLSANFADLKNEIKRCKEANIEWIHYDVMDYDFVPNLTFGSKVLKDIVNSSDFK 63
Query: 65 FDCHLMI----SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV----A 116
D H M+ + + ++T H ES ++ + + + K + A
Sbjct: 64 IDIHFMVKVKTKRFEDFFSEYIKCKPTMMTMHVESMS--KKEINMFYNICKTNNIMFSLA 121
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEV 174
++P+T + +L ID+++ ILIM+V PGFGGQ I + K++ L + S+E+
Sbjct: 122 VSPKTNIKVLNKWIDKLENILIMSVEPGFGGQSFIPEVLEKVKHLAELKKTNGYTYSIEI 181
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
DGG+ K + AG +++V GS F K
Sbjct: 182 DGGINDETSKKAIDAGVEMIVAGSYLFESKN 212
>gi|226470368|emb|CAX70464.1| hypotherical protein [Schistosoma japonicum]
Length = 185
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SD 62
I I PSIL AD S+L N+ +GA +H D+MDG FVPNI+ G V+ SL+ +
Sbjct: 9 ILIGPSILNADLSQLAVVCDNLLNSGADYLHLDIMDGHFVPNITIGHPVVASLKKHLPCK 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D H+M+S + + + AG TFH ESS + ++ I K G+ I P+TP
Sbjct: 69 AFLDLHMMVSDPEKWVENMKAAGASQYTFHFESSKDVMHCIQKIREADMKVGLGIKPKTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
V + +D +DM+LIMTV PGFGGQ+ + +PK+
Sbjct: 129 VTEVLPYVDLVDMVLIMTVEPGFGGQKFMADMLPKV 164
>gi|152970252|ref|YP_001335361.1| allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262044265|ref|ZP_06017331.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150955101|gb|ABR77131.1| putative ribulose-phosphate 3-epimerase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|259038324|gb|EEW39529.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 218
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 8/190 (4%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D +L E++ + A ++H D+MDG +V N++ A + +R Y+ D HLM+ +
Sbjct: 2 DMMKLTEQL-RFLNSKADRLHVDIMDGHYVKNLALSASFVAQIRPYTSLPIDVHLMVEAP 60
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM---GKKTGVAINPETPVAILEDVID 131
S I + DAG D + HPE+ R + R I+ + GK+ G+ +NP TPV ++ +
Sbjct: 61 ASFIPALLDAGADAFSLHPETI--CREAFRVINMLRQAGKEVGMVLNPATPVESIQHYLH 118
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNIKSLVQA 189
+D + +MTV+PG+ GQ I + KI Q L G LEVDG ++L+ A
Sbjct: 119 LLDKVTVMTVDPGYAGQPFIPEMLAKITQLHQLKETGSLRFLLEVDGSCNRNTYRALLGA 178
Query: 190 GADLLVVGSS 199
GA +LV+GSS
Sbjct: 179 GAQILVMGSS 188
>gi|257063707|ref|YP_003143379.1| ribulose-phosphate 3-epimerase [Slackia heliotrinireducens DSM
20476]
gi|256791360|gb|ACV22030.1| ribulose-phosphate 3-epimerase [Slackia heliotrinireducens DSM
20476]
Length = 231
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 115/204 (56%), Gaps = 7/204 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF + ++I I + GA IH DVMDG FVPN++ G + L+ ++
Sbjct: 6 KIAPSILSADFMNMEKDIREIEEGGAAFIHVDVMDGHFVPNLTLGVPFVAGLKRIANIPL 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMIS+ + + D +T H ES + + +++ IH G K +A+ P+
Sbjct: 66 DVHLMISNPLEQLPWYLEHQPDFVTVHFESLDEAAGEVDKAVDMIHDAGCKAAIALKPDC 125
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
V +L I +++M+LIM+V PGF GQ IE + ++ A+ + + +EVDGG++
Sbjct: 126 DVEVLRPYISKLEMVLIMSVYPGFSGQSYIEGSDQRVAAVAAMAREAGVDPLIEVDGGLS 185
Query: 180 SRNIKSLV-QAGADLLVVGSSFFN 202
+ LV AGAD+LV GS F
Sbjct: 186 VNDPTRLVAAAGADVLVAGSGCFK 209
>gi|313665466|ref|YP_004047337.1| ribulose-phosphate 3-epimerase [Mycoplasma leachii PG50]
gi|312949344|gb|ADR23940.1| putative ribulose-phosphate 3-epimerase [Mycoplasma leachii PG50]
Length = 218
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 121/218 (55%), Gaps = 7/218 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDS 63
++IVPSI A+ L EI+N+TKA QIHFDVMDG FV N + ++ ++ + +
Sbjct: 1 MKIVPSIYCANLIDLKTEITNLTKAQINQIHFDVMDGVFVKNYALSNKLVDEIKQQFPNL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK---KTGVAINPE 120
+ + H+M + I++ +A D +TFH + + ++ I+ + K K G+A++
Sbjct: 61 IIEVHIMGIDLLDKISLFKNA--DYLTFHYNAINDLNQAKLWINEIKKYNLKPGIALDLN 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVT 179
+ ++ +++EI+++ M++ PGF GQ+ ES+ K+ K L K + ++DGGV
Sbjct: 119 NEINDIKKILNEIEVVTFMSIKPGFTGQKFEESSWTKLNLIKELKLKYPHLKFQIDGGVR 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NIK L+ D +VVGS FN+ + ++ L+
Sbjct: 179 WENIKKLIDCQLDWIVVGSLLFNENDYLKVVSKIKQLE 216
>gi|124805999|ref|XP_001350598.1| D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium falciparum
3D7]
gi|58176834|pdb|1TQX|A Chain A, Crystal Structure Of Pfal009167 A Putative D-Ribulose 5-
Phosphate 3-Epimerase From P.Falciparum
gi|58176835|pdb|1TQX|B Chain B, Crystal Structure Of Pfal009167 A Putative D-Ribulose 5-
Phosphate 3-Epimerase From P.Falciparum
gi|23496723|gb|AAN36278.1|AE014847_5 D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium falciparum
3D7]
Length = 227
Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 11/203 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ Y+ S+ F
Sbjct: 8 IAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSL---RTIHAMGKKTGVAINPET 121
D HLM+ + ++ ++ + + +TFH E+ + R + + I G++I P+T
Sbjct: 68 DVHLMVEYPEKYVPLLKTS--NQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKT 125
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V L ++D I+ +L+MTV PGFGGQ + + K+ + ++++++VDGG+
Sbjct: 126 DVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRK--KYKNLNIQVDGGLN 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ GA+++V G+S FN
Sbjct: 184 IETTEISASHGANIIVAGTSIFN 206
>gi|319442109|ref|ZP_07991265.1| ribulose-phosphate 3-epimerase [Corynebacterium variabile DSM
44702]
Length = 224
Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 9/208 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSILAADF+ L EI+ + GA +H DVMD FVPN+SFG V ++R
Sbjct: 1 MSQQTLIAPSILAADFADLAGEIARVP--GADWLHIDVMDNHFVPNLSFGLPVAEAVRRR 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM---GKKTGVAI 117
+D+ D HLMI + A G +TFH E+ + ++ + G + G+++
Sbjct: 59 TDTFTDVHLMIEDPERWAPEYAAFGN--VTFHLEAVADVDAAVALAATLRAAGTRAGISV 116
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P T V L D + + D++L+M+V PGFGGQ + + K+R + I + +E+D
Sbjct: 117 KPGTAVEPLLDHLADFDLVLVMSVEPGFGGQSFMPEVLEKVRALRTRIDAEGLDTFIEID 176
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GG+ AG D+ V GSS F +
Sbjct: 177 GGIGVETAAGSAAAGVDVYVAGSSVFGK 204
>gi|238894781|ref|YP_002919515.1| allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae NTUH-K2044]
gi|238547097|dbj|BAH63448.1| D-allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 226
Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 119/212 (56%), Gaps = 7/212 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S + PS++ D ++ E+I+ + K A H D+MDG +V NI+ I +L+ +
Sbjct: 2 SAKFSPSLMCMDLTQFKEQITAMNKK-ADFYHVDIMDGNYVRNITLSPFFIENLKKITTV 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETP 122
D HLM++ + I + +AG DII+FHPE++ + I R L I GKK GV +NP TP
Sbjct: 61 PIDVHLMVNHPEDIIPMCLEAGADIISFHPETANNKIFRLLNQIKDAGKKCGVVLNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ---AKALIGKRSISLEVDGGVT 179
+ + +D + +M+V+PG+ GQ+ I ++ KIR+ + G R ++ E+DG
Sbjct: 121 AESIAEYAHLLDKVTVMSVDPGYAGQKFIPESLNKIRKLINMRKNNGYRYLT-EIDGSCN 179
Query: 180 SRNIKSLVQAGADLLVVGSS-FFNQKGEISYA 210
+ + ++G D+ +VG+S F+ ++S A
Sbjct: 180 EKTFGQIAESGVDVFIVGTSGLFSLHEDVSQA 211
>gi|51893476|ref|YP_076167.1| ribulose-5-phosphate 3-epimerase [Symbiobacterium thermophilum IAM
14863]
gi|51857165|dbj|BAD41323.1| ribulose-5-phosphate 3-epimerase [Symbiobacterium thermophilum IAM
14863]
Length = 213
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMI 71
+ A F L E++ + AG H DVMDG FVPN G I + +++ D HLMI
Sbjct: 1 MCAHFGNLAHEVAELEAAGIDMFHLDVMDGRFVPNFGMGLQDIEFIAAHATKPADVHLMI 60
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+++ A G +I HPE+ H R+L I G G+AINP TPV +E ++
Sbjct: 61 EDPGNYVEKFAKLGIKVIYTHPEADYHPARTLLKIADAGAAPGIAINPGTPVEAIEPLLH 120
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+L+MTVNPGF GQ + K+ + L + + +DG T+ ++ L G
Sbjct: 121 LAQYVLVMTVNPGFAGQPYLSFVDEKVDRLAELKERYGYRIVIDGACTAAVVERLAPRGV 180
Query: 192 DLLVVGSSFFNQKGEISYAKRLNDLK 217
D V+G+ +G+ Y + + +L+
Sbjct: 181 DGFVLGTKGLFGRGK-PYGEVIAELR 205
>gi|311272996|ref|XP_003133680.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Sus scrofa]
Length = 287
Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 100/180 (55%), Gaps = 11/180 (6%)
Query: 22 EISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHIN 79
E S A +Q+HF VPNI+FG V+ SLR D FD H+M+S + +
Sbjct: 88 EWSLAELAPYQQLHF-------VPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVK 140
Query: 80 IIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM 139
+A AG + TFH E++ + ++ I G K G+AI P T V L ++IDM L+M
Sbjct: 141 PMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVM 200
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
TV PGFGGQ+ +E +PK+ + S+ +EVDGGV I +AGA+++V GS+
Sbjct: 201 TVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGVGPDTIHKCAEAGANMIVSGSA 258
>gi|193216942|ref|YP_002000184.1| ribulose-phosphate 3-epimerase [Mycoplasma arthritidis 158L3-1]
gi|193002265|gb|ACF07480.1| ribulose-phosphate 3-epimerase [Mycoplasma arthritidis 158L3-1]
Length = 215
Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 13/209 (6%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I PSIL L + + G +H+DVMD FVPN++ I+ ++ S +
Sbjct: 3 KISPSILDVKKENLVNYVQQLIDWGVVNVHYDVMDNIFVPNVALQYKEIKEIKEKCSRHI 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK----TGVAINPE 120
D HLM+ + + + G DI+TFH E+ + L+ + A+ KK G+AI P
Sbjct: 63 MDIHLMVKDVFGYYEMYKKLG-DILTFHFEAMS--QDDLQNLIALAKKDQTKLGLAIKPN 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV + + + ++LIM+V PGFGGQ+ IE++ K+++ I + + +++DGGV
Sbjct: 120 TPVEAIIPYLKHLSLLLIMSVEPGFGGQKFIENSYDKVKKLSDYIKQNHLDCIIQIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSF---FNQK 204
+NIK AG +L VVGS FNQ+
Sbjct: 180 NDQNIKYCYDAGVNLAVVGSFLVKNFNQE 208
>gi|306830609|ref|ZP_07463775.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325977590|ref|YP_004287306.1| allulose-6-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|304427256|gb|EFM30362.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177518|emb|CBZ47562.1| allulose-6-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 229
Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 4/197 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS++ D + E+I+ + K + H D+MDG FVPNI+ I+ +R SD
Sbjct: 5 ELSPSLMCMDLDKFTEQITFLNKH-VQSYHMDIMDGHFVPNITLSPWFIQEVRKISDLPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVA 124
HLM+ + + + C+ I H E + R + IH G K GV +NPETP+
Sbjct: 64 SAHLMVEDPTFWVQELINIKCEWICMHAEVLNGLAFRLIDQIHEAGLKAGVVLNPETPIE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ I +D I IMTV+PGF GQ+ +E T+ KI + + L K+ S +E+DG + +
Sbjct: 124 TIFPYIALVDKITIMTVDPGFAGQRFLEDTLEKIIELRHLRKKQGYSYVIEMDGSSSRKT 183
Query: 183 IKSLVQAGADLLVVGSS 199
K + A D+ V+G S
Sbjct: 184 FKRIDAANPDIYVIGRS 200
>gi|194014554|ref|ZP_03053171.1| D-allulose-6-phosphate 3-epimerase [Bacillus pumilus ATCC 7061]
gi|194013580|gb|EDW23145.1| D-allulose-6-phosphate 3-epimerase [Bacillus pumilus ATCC 7061]
Length = 230
Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 102/195 (52%), Gaps = 5/195 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E I +I A + H DVMDG +V NI+ I LR +D D H
Sbjct: 7 PSLMCMDLTHFREHI-HILNTRADRYHVDVMDGHYVKNITLSPFFIEQLRKLTDRPIDVH 65
Query: 69 LMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAIL 126
LM I+ DAG +I HPE + R +R IH + G +NP TP+A L
Sbjct: 66 LMAEYPQEFLIDACIDAGASMICLHPEVVQRDVFRIIRHIHQRNCEVGFVLNPATPIAAL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNIK 184
+ + ID + IMT++PGF GQ I+ + K++Q K + G S S+EVDG +
Sbjct: 126 DSYLHLIDRVTIMTIDPGFAGQPFIKEMLQKMKQVKDVKEKGGYSFSIEVDGSCNESTFR 185
Query: 185 SLVQAGADLLVVGSS 199
L +AG ++ ++G+S
Sbjct: 186 LLAEAGNEIYIIGNS 200
>gi|225406856|ref|ZP_03761045.1| hypothetical protein CLOSTASPAR_05077 [Clostridium asparagiforme
DSM 15981]
gi|225042612|gb|EEG52858.1| hypothetical protein CLOSTASPAR_05077 [Clostridium asparagiforme
DSM 15981]
Length = 220
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PS+ +++ + LGE+ + + AG +H D+ DG F P I+FG D ++ LR Y+D+ D
Sbjct: 4 ILPSLASSNLAALGEQAARVRSAG--YLHLDIEDGNFSPGITFGPDTVKLLRDYTDAELD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +S+I + D G I H ESS + R+L I G + G+A+N +TPVA
Sbjct: 62 AHLMVTDPESYIEELRDYGVRSIAVHLESSRYPSRALNKICQAGMRPGLALNYKTPVAEA 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
D + +L++T G + ++ ++ + + L + VDGGVT N+ L
Sbjct: 122 VPYADLAEYVLLLTNESDCAGIKFKPYSLDRVMELRRL-APAGCEIWVDGGVTPENLPLL 180
Query: 187 VQAGADLLVVGSSFFN 202
AGAD V+G + F+
Sbjct: 181 AAAGADRAVMGRAVFS 196
>gi|15835720|ref|NP_300244.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae J138]
gi|8978558|dbj|BAA98395.1| ribulose-P epimerase [Chlamydophila pneumoniae J138]
Length = 229
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 109/203 (53%), Gaps = 4/203 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSI+ AD + LG E + +AG+ IH D+MDG FVPN++FG +I ++ +D
Sbjct: 6 SVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H MI + I +G D I H E+S I+ L I G + G+A +P+T +
Sbjct: 66 FLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSI 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIG-KRSISLEVDGGVT 179
L + D++++M+V GF Q + TI KI R A +G K S +EVDGG+
Sbjct: 126 EFLPSFLPFCDVVVLMSVYQGFTVQSFLPHTIEKIAFARHAIKTLGLKDSCLIEVDGGID 185
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
++ AGAD+LV S F
Sbjct: 186 QQSAPLCRDAGADILVTASYLFE 208
>gi|227552566|ref|ZP_03982615.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX1330]
gi|257896906|ref|ZP_05676559.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com12]
gi|293378463|ref|ZP_06624626.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecium
PC4.1]
gi|227178315|gb|EEI59287.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX1330]
gi|257833471|gb|EEV59892.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com12]
gi|292642792|gb|EFF60939.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecium
PC4.1]
Length = 229
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E+I + + H D+MDG +VPN++ I +R S H
Sbjct: 8 PSLMTMDLDKFKEQIEFLNQH-VDSYHIDIMDGHYVPNLTLSPWFIEEVRKISHLPMSAH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILE 127
LM++ +N + C+ I H E + R + IHA G K GV +NPETP+ +
Sbjct: 67 LMVTDQSFWVNQLISQKCEWICMHVECLDGLAFRLIDQIHAAGLKAGVVLNPETPIETIF 126
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKS 185
ID +D I IMTV+PGF GQ+ IEST+ KI + L ++ +E+DG ++ K
Sbjct: 127 PYIDLVDKITIMTVDPGFAGQRFIESTLDKIVDLRKLRQEKGYHYLIEMDGSSNRKSFKR 186
Query: 186 LVQAGADLLVVGSS 199
+ AG D+ ++G S
Sbjct: 187 IDHAGPDIYIIGRS 200
>gi|194211275|ref|XP_001488267.2| PREDICTED: similar to Ribulose-phosphate 3-epimerase
(Ribulose-5-phosphate-3-epimerase) [Equus caballus]
Length = 278
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Query: 43 FVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 93 FVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPG 152
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 153 ALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 212
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ S+ +EVDGGV I +AGA+++V GS+
Sbjct: 213 LRTQFP--SLDIEVDGGVGPDTIHKCAEAGANMIVSGSA 249
>gi|167768255|ref|ZP_02440308.1| hypothetical protein CLOSS21_02811 [Clostridium sp. SS2/1]
gi|167709779|gb|EDS20358.1| hypothetical protein CLOSS21_02811 [Clostridium sp. SS2/1]
Length = 231
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 107/197 (54%), Gaps = 4/197 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI S++ DF ++ E++ + H D+MDG F NI+ D+I+S + S
Sbjct: 11 QIAVSLMCMDFLKIKEQLE-VLNESVGMYHIDIMDGHFCKNITLSPDLIKSFKKVSKLPM 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM + + I +A+AG DII+ H E+ + R I +G K G+ +NP T +
Sbjct: 70 DVHLMTTEPNDWIETVAEAGADIISVHAETINGDAYRIYNEIERLGCKRGLVLNPATTLE 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ ++ +D++ IMTV+ GF GQ IE + KI +AK L + +++DG +
Sbjct: 130 SVKHYLNRVDLLTIMTVDVGFSGQPFIEEMLDKIAEAKKLREENGYHYKIQIDGSCNPKT 189
Query: 183 IKSLVQAGADLLVVGSS 199
K L +AGAD+ ++G S
Sbjct: 190 FKRLKEAGADIYILGGS 206
>gi|213584524|ref|ZP_03366350.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 149
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT 140
A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++ L+ V+D++D+IL+M+
Sbjct: 5 FAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLSYLDYVMDKLDVILLMS 64
Query: 141 VNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
VNPGFGGQ I T+ K+R+ + I I LEVDGGV NI + AGAD+ V GS
Sbjct: 65 VNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNIGEIAAAGADMFVAGS 124
Query: 199 SFFNQKGEISYAKRLNDLK 217
+ F++ Y K +++++
Sbjct: 125 AIFDKP---DYKKVIDEMR 140
>gi|308809153|ref|XP_003081886.1| Fushion of putative sugar/xylulosekinase and ribulose-phosphate
(IC) [Ostreococcus tauri]
gi|116060353|emb|CAL55689.1| Fushion of putative sugar/xylulosekinase and ribulose-phosphate
(IC) [Ostreococcus tauri]
Length = 755
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 11/205 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY---SDS 63
+ PS+LAAD L E++ + GA +H D+MDG FVPN++ G V+ L D
Sbjct: 534 VCPSLLAADQGALASEVNRMLDEGADWLHVDIMDGHFVPNLTIGPPVVADLSRRVGPRDV 593
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS--LRTIHAMGKKTGVAINPET 121
FDCHL +++ + + +A AG +TFH E R + RTI ++G + VA P T
Sbjct: 594 FFDCHLSVNNPATLVPALAKAGASSVTFHIEVVNGERAAELCRTIRSLGMRVAVACKPST 653
Query: 122 PV--AILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+ + D+ + +DM+L ++V PGFGGQ+ S + K+R ++ I +++DGG
Sbjct: 654 SCESSGVYDLCEAGLVDMVLCLSVEPGFGGQKFKPSVLDKVRSLRSRF--PDIDIQMDGG 711
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V AGA++LV GS+ F+
Sbjct: 712 VNPTTAVECAAAGANVLVAGSAIFS 736
>gi|116782817|gb|ABK22672.1| unknown [Picea sitchensis]
Length = 196
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Query: 36 FDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPES 95
D+MDG FVPN++ GA VI+SLR ++ + DCHLM+++ ++ A AG TFH E+
Sbjct: 1 MDIMDGHFVPNLTIGAPVIQSLRKHTQAFLDCHLMVTNPLDYVEPFAKAGASGFTFHVEA 60
Query: 96 SPHIRRSL-RTIHAMGKKTGVAINPETPVAILEDVIDE---IDMILIMTVNPGFGGQQLI 151
+ + L I G + VA+ P T + + +++ ++M+L+MTV PGFGGQ+ +
Sbjct: 61 AEDNWQDLINRIRNAGMRPAVALKPGTSIETVYPLVESKEPVEMVLVMTVEPGFGGQKFM 120
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
T+ K+R + S+ +EVDGG+ I AGA+ +V GSS F K
Sbjct: 121 PDTMDKVRDLRQKY--PSLDIEVDGGLGPSTIDQASSAGANCIVAGSSVFGAK 171
>gi|148667820|gb|EDL00237.1| ribulose-5-phosphate-3-epimerase, isoform CRA_c [Mus musculus]
Length = 188
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 43 FVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 3 FVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPG 62
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 63 ALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 122
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ ++ +EVDGGV ++ +AGA+++V GS+
Sbjct: 123 LRTQF--PTLDIEVDGGVGPDTVQKCAEAGANMIVSGSA 159
>gi|257899637|ref|ZP_05679290.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com15]
gi|257837549|gb|EEV62623.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com15]
Length = 229
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E+I + + H D+MDG +VPN++ I +R S H
Sbjct: 8 PSLMTMDLDKFKEQIEFLNQH-VDSYHIDIMDGHYVPNLTLSPWFIEEVRKISHLPMSAH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILE 127
LM++ +N + C+ I H E + R + IHA G K GV +NPETP+ +
Sbjct: 67 LMVTDQSFWVNQLIAQKCEWICMHVECLDGLAFRLIDQIHAAGLKAGVVLNPETPIETIF 126
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKS 185
ID +D I IMTV+PGF GQ+ IEST+ KI + L ++ +E+DG ++ K
Sbjct: 127 PYIDLVDKITIMTVDPGFAGQRFIESTLDKIVDLRKLRQEKGYHYLIEMDGSSNRKSFKR 186
Query: 186 LVQAGADLLVVGSS 199
+ AG D+ ++G S
Sbjct: 187 IDHAGPDIYIIGRS 200
>gi|293570822|ref|ZP_06681869.1| D-allulose-6-phosphate 3-epimerase [Enterococcus faecium E980]
gi|291609090|gb|EFF38365.1| D-allulose-6-phosphate 3-epimerase [Enterococcus faecium E980]
Length = 229
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E+I + + H D+MDG +VPN++ I +R S H
Sbjct: 8 PSLMTMDLDKFKEQIEFLNQH-VDSYHIDIMDGHYVPNLTLSPWFIEEVRKISHLPMSAH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILE 127
LM++ +N + C+ I H E + R + IHA G K GV +NPETP+ +
Sbjct: 67 LMVTDQSFWVNQLIAQKCEWICMHVECLDGLAFRLIDQIHAAGLKAGVVLNPETPIETIF 126
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKS 185
ID +D I IMTV+PGF GQ+ IEST+ KI + L ++ +E+DG ++ K
Sbjct: 127 PYIDLVDKITIMTVDPGFAGQRFIESTLDKIVDLRKLRQEKGYHYLIEMDGSSNRKSFKR 186
Query: 186 LVQAGADLLVVGSS 199
+ AG D+ ++G S
Sbjct: 187 IDHAGPDIYIIGRS 200
>gi|330006127|ref|ZP_08305526.1| D-allulose-6-phosphate 3-epimerase [Klebsiella sp. MS 92-3]
gi|328535943|gb|EGF62365.1| D-allulose-6-phosphate 3-epimerase [Klebsiella sp. MS 92-3]
Length = 218
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 7/174 (4%)
Query: 31 AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIIT 90
A ++H D+MDG +V N++ A + +R Y+ D HLM+ + S I + DAG D +
Sbjct: 17 ADRLHVDIMDGHYVKNLALSASFVAQIRPYTSLPIDVHLMVEAPASFIPALLDAGADAFS 76
Query: 91 FHPESSPHIRRSLRTIHAM---GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG 147
HPE+ R + R I+ + GK+ G+ +NP TPV ++ + +D + +MTV+PG+ G
Sbjct: 77 LHPETI--CREAFRVINMLRQAGKEVGMVLNPATPVESIQHYLHLLDKVTVMTVDPGYAG 134
Query: 148 QQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
Q I + KI Q L G LEVDG ++L+ AGA +LV+GSS
Sbjct: 135 QPFIPEMLAKITQLHQLKETGSLRFLLEVDGSCNRNTYRALLGAGAQILVMGSS 188
>gi|26325066|dbj|BAC26287.1| unnamed protein product [Mus musculus]
Length = 242
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 43 FVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 47 FVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPG 106
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 107 ALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 166
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ ++ +EVDGGV ++ +AGA+++V GS+
Sbjct: 167 LRTQFP--TLDIEVDGGVGPDTVQKCAEAGANMIVSGSA 203
>gi|322834182|ref|YP_004214209.1| Ribulose-phosphate 3-epimerase [Rahnella sp. Y9602]
gi|321169383|gb|ADW75082.1| Ribulose-phosphate 3-epimerase [Rahnella sp. Y9602]
Length = 226
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 121/220 (55%), Gaps = 7/220 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ + +++ + + A +H D+MDG +V NI+ I +R ++ V
Sbjct: 4 KISPSLMCMSLIDIKQQLEVLNRR-ADMLHIDIMDGHYVKNITLSPFFIEQIRPHTPLVL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + I IA AG D I H E+ + R + I ++GKK GV +NP TPV
Sbjct: 63 DVHMMVENPADFIEPIALAGADFICPHAETINRDAFRIINQIRSLGKKVGVVLNPATPVE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ I +D I +MTV+PG+ GQ I + KI Q + L ++ +E+DG R
Sbjct: 123 YIQHYIHLLDKITVMTVDPGYAGQPFIPEMLGKIAQLRDLKQQKGYRYLIEIDGSCNLRT 182
Query: 183 IKSLVQAGADLLVVGSS---FFNQKGEISYAKRLNDLKKS 219
+ L+ AGA++L+VGSS + ++++ K L+ ++++
Sbjct: 183 YQDLMGAGAEVLIVGSSGLFTLDNDLDVAWDKMLDQMRQA 222
>gi|46107412|ref|XP_380765.1| hypothetical protein FG00589.1 [Gibberella zeae PH-1]
Length = 218
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 31/192 (16%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDS--------VFDCHLMISSIDSHINIIADAGCDIIT 90
+DG FVPNI+FG V+ ++R + D FDCH+MI+ + AGC++
Sbjct: 7 LDGHFVPNITFGPPVVAAIRGHVDQPTEAHGRGTFDCHMMIAEPKKWVKEFKKAGCNLYC 66
Query: 91 FHPESS---------------PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID---- 131
FH E++ + + +R IH G G+AI P+T V +L ++++
Sbjct: 67 FHYEAAFSSAAENPEDQTDEKTNPKALIRYIHDQGLLAGIAIKPDTSVDVLWEILENSEE 126
Query: 132 --EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
DM+L+MTV PGFGGQ+ + S +PK++ +A + +++EVDGG+ + I A
Sbjct: 127 KERPDMVLVMTVYPGFGGQKFMASELPKVQALRAKYPE--LNIEVDGGIGPKTIDEAADA 184
Query: 190 GADLLVVGSSFF 201
GA+++V GS+ F
Sbjct: 185 GANVIVAGSAVF 196
>gi|257888206|ref|ZP_05667859.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,141,733]
gi|257824260|gb|EEV51192.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,141,733]
Length = 229
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E+I + H D+MDG +VPN++ I +R S H
Sbjct: 8 PSLMTMDLDKFKEQIEFLNHH-VDSYHIDIMDGHYVPNLTLSPWFIEEVRKISHLPMSAH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILE 127
LM++ +N + C+ I H E + R + IHA G K GV +NPETP+ +
Sbjct: 67 LMVTDQSFWVNQLISQKCEWICMHVECLDGLAFRLIDQIHAAGLKAGVVLNPETPIETIF 126
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKS 185
ID +D I IMTV+PGF GQ+ IEST+ KI + L ++ +E+DG ++ K
Sbjct: 127 PYIDLVDKITIMTVDPGFAGQRFIESTLDKIVDLRKLRQEKGYHYLIEMDGSSNRKSFKR 186
Query: 186 LVQAGADLLVVGSS 199
+ AG D+ ++G S
Sbjct: 187 IDHAGPDIYIIGRS 200
>gi|298503357|ref|YP_003725297.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
TCH8431/19A]
gi|298238952|gb|ADI70083.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
TCH8431/19A]
Length = 221
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 105/192 (54%), Gaps = 6/192 (3%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMI 71
+ D + E+I+ + A H D+MDG FVPNI+ I+ ++ SD+ HLM+
Sbjct: 1 MTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNITLSPWFIQEVQKISDTPLSVHLMV 59
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILEDVI 130
+ ++ + D C+ I H E + R + IH G K GV +NPETPV+ + I
Sbjct: 60 TDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNPETPVSTIFPYI 119
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSRNIKSLV 187
D +D + IMTV+PGF GQ+ +EST+ KI RQ + G I +E+DG + + K +
Sbjct: 120 DLLDKVTIMTVDPGFAGQRFLESTLYKIQELRQLRVQNGYHYI-IEMDGSSSRKTFKQID 178
Query: 188 QAGADLLVVGSS 199
AG D+ V+G S
Sbjct: 179 VAGPDIYVIGRS 190
>gi|269121642|ref|YP_003309819.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268615520|gb|ACZ09888.1| Ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 226
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 5/206 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E++ I A H D+MDG FV NI+ + +L+ S D H
Sbjct: 8 PSLMCMDLLSMKEQVE-ILNERADFYHVDIMDGHFVKNITLSPFFVSNLKRISKLPIDVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
LM D +I +A +G D I H E+ + R + I G K G+ +NP TP+ ++
Sbjct: 67 LMTEYPDDYIEELAKSGADYICPHAETINKDAFRIINKIKGFGCKAGIVLNPATPIEWIK 126
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKS 185
I +D I +MTV+PGF GQ I + KI++ K L K + +EVDG R
Sbjct: 127 YYIHLLDKITVMTVDPGFAGQPFIPEMLDKIKELKELKEKNGYNYLIEVDGSCNERTFDI 186
Query: 186 LVQAGADLLVVGSS-FFNQKGEISYA 210
L +AGA++L+VGSS FN ++ A
Sbjct: 187 LTEAGAEVLIVGSSGLFNLDSDLPKA 212
>gi|148667821|gb|EDL00238.1| ribulose-5-phosphate-3-epimerase, isoform CRA_d [Mus musculus]
Length = 227
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
Query: 43 FVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 49 FVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPG 108
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 109 ALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 168
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ ++ +EVDGGV ++ +AGA+++V GS+
Sbjct: 169 LRTQF--PTLDIEVDGGVGPDTVQKCAEAGANMIVSGSA 205
>gi|149411333|ref|XP_001508282.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 212
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Query: 43 FVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
FVPNI+FG V+ SLR D FD H+M++ + + +A AG + TFH E++ +
Sbjct: 27 FVPNITFGHPVVESLRKQLGQDPFFDMHMMVARPEQWVKPMAVAGANQYTFHLEATENPG 86
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 87 ALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 146
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ S+ +EVDGGV I +AGA+++V GS+
Sbjct: 147 LRTQFP--SLDIEVDGGVGPDTIHKCAEAGANMIVSGSA 183
>gi|323332987|gb|EGA74389.1| Rpe1p [Saccharomyces cerevisiae AWRI796]
Length = 214
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 88/157 (56%), Gaps = 13/157 (8%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-------- 58
I PSILA+DF+ LG E + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65
Query: 59 -----SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ FDCH+M+ + + ++ A G D TFH E++ ++ I + G K
Sbjct: 66 ASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
AI P T V +L ++ +DM L+MTV PGFGGQ++
Sbjct: 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKI 162
>gi|288935444|ref|YP_003439503.1| ribulose-phosphate 3-epimerase [Klebsiella variicola At-22]
gi|288890153|gb|ADC58471.1| Ribulose-phosphate 3-epimerase [Klebsiella variicola At-22]
Length = 226
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 119/214 (55%), Gaps = 11/214 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S + PS++ D ++ E+I+ + K A H D+MDG +V NI+ I +L+ +
Sbjct: 2 SAKFSPSLMCMDLTQFKEQITAMNKK-ADFYHVDIMDGNYVRNITLSPFFIENLKKITTV 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETP 122
D HLM++ + I + +AG DII+FHPE++ + I R L I GK+ GV +NP TP
Sbjct: 61 PIDVHLMVNHPEDIIPMCLEAGADIISFHPETANNKIFRLLNQIKDAGKQCGVVLNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS-----LEVDGG 177
+ + +D + +M+V+PG+ GQ+ I ++ KIR+ LI R + E+DG
Sbjct: 121 AESIAEYAHLLDKVTVMSVDPGYAGQKFIPESLNKIRK---LISMRKNNGYHYLTEIDGS 177
Query: 178 VTSRNIKSLVQAGADLLVVGSS-FFNQKGEISYA 210
++ + ++G D+ +VG+S F+ ++S A
Sbjct: 178 CNAKTFGQIAESGVDVFIVGTSGLFSLHEDVSQA 211
>gi|156103193|ref|XP_001617289.1| D-ribulose-5-phosphate 3-epimerase [Plasmodium vivax SaI-1]
gi|148806163|gb|EDL47562.1| D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium vivax]
Length = 227
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 15/204 (7%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PS+LA++ S+L EE + + GA+ IH DVMD FVPN+SFG VI L+ Y+ + F
Sbjct: 8 IAPSVLASNISKLAEETQRMEELGAEWIHLDVMDMHFVPNLSFGPPVINDLKKYTKGIFF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFH----PESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ + + +++ + + D +TFH E + + + I + G++I P+T
Sbjct: 68 DVHLMVENPEKYVDSLKTS--DQLTFHFEALNEDTDKCIKLAQQIRDSNRWCGISIKPKT 125
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
V + ++D I+ +L+MTV PGFGGQ + + K+ A + K + ++++VDGG
Sbjct: 126 DVEKIVPLLDTNLINTVLVMTVEPGFGGQSFMHDMMSKV----AFLRKKYKDLNIQVDGG 181
Query: 178 VTSRNIKSLVQAGADLLVVGSSFF 201
+ + GA+++V G+S F
Sbjct: 182 LNIETTEISASHGANVIVAGTSIF 205
>gi|167757587|ref|ZP_02429714.1| hypothetical protein CLORAM_03137 [Clostridium ramosum DSM 1402]
gi|237735142|ref|ZP_04565623.1| ribulose-phosphate 3-epimerase [Mollicutes bacterium D7]
gi|167702584|gb|EDS17163.1| hypothetical protein CLORAM_03137 [Clostridium ramosum DSM 1402]
gi|229381918|gb|EEO32009.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. D7]
Length = 217
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 2/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A+F L +EI + + G H DVMDG +VPN G I + + D
Sbjct: 5 LCPSMMCANFGNLEKEIKELEEGGIDFFHLDVMDGSYVPNFGMGLQDIEYICKQATKPCD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +I A G II HPE+ H R+L+ I G K G+A+NP T +
Sbjct: 65 VHLMVVNPSDYIEKFAALGVKIIYIHPETDKHACRTLQKIKDAGAKAGIALNPGTSFETV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ-AKALIGKRSISLEVDGGVTSRNIKS 185
++++ D +++M+VNPGF GQ+ ++ PK RQ A + +DG + I
Sbjct: 125 KELLYLCDYVMLMSVNPGFAGQKYLDFVTPKFRQFVDAASNYGGYQVMIDGACSPEKIAM 184
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + G ++G+S K E SY + + +L+K
Sbjct: 185 LSKVGVKGFILGTSALFGK-EKSYKEIITELRK 216
>gi|154503068|ref|ZP_02040128.1| hypothetical protein RUMGNA_00891 [Ruminococcus gnavus ATCC 29149]
gi|153796309|gb|EDN78729.1| hypothetical protein RUMGNA_00891 [Ruminococcus gnavus ATCC 29149]
Length = 203
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 99/188 (52%)
Query: 19 LGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHI 78
L +EI + +GA +H DVMDG +VPN I ++R + D H+M+ + +I
Sbjct: 4 LKDEIMRLDVSGADILHIDVMDGHYVPNFGMSFQDIETIRKNTSLKLDVHMMMYNPGRYI 63
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
A+ G DII HP+S +L I +GK G+ INP + +++++ +D +L+
Sbjct: 64 ERYAEFGADIIYIHPDSETIPTETLCRIRKLGKAPGIVINPGISLDSIQELLSLVDYVLV 123
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
MTVNPGF G+ + PKI Q L + + +DGGVT ++ L + G + V+G
Sbjct: 124 MTVNPGFAGRDYLHFVEPKIEQLLKLRQRYKFHIVIDGGVTWEILERLWKKGVEGFVLGK 183
Query: 199 SFFNQKGE 206
+K E
Sbjct: 184 QILFEKNE 191
>gi|304317167|ref|YP_003852312.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778669|gb|ADL69228.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 221
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ + +L E+IS + + A +H D+MDG FV NI+ I ++SY + D H
Sbjct: 7 PSLMCMNLIKLNEQIS-VLNSKADFLHVDIMDGHFVKNITLSPFFIEQIKSYVNIPIDAH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
LM+ + +I I +G IT H E+ + R + I + G G+A+NP TP++ ++
Sbjct: 66 LMVENPGDYIEICEKSGASFITIHAETINREAFRIIDRIKSHGLMVGIALNPATPISEIK 125
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKS 185
I++ID I IMTV+PGF GQ I + KIR K L + + +E DG +
Sbjct: 126 HYINKIDKITIMTVDPGFAGQPFIPEVLEKIRDLKRLKDDNNYNYLIEADGSCNKNTFQV 185
Query: 186 LVQAGADLLVVGSS-FFNQKGEISYAKRL 213
L AG + V+GSS FN ++ A +
Sbjct: 186 LKDAGCKVFVLGSSGLFNLSDDLGKAWEI 214
>gi|125606254|gb|EAZ45290.1| hypothetical protein OsJ_29932 [Oryza sativa Japonica Group]
Length = 354
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 2 TPSIQIVPSILAA-DFSRLGEEISNITKAGAKQIHFDVMDGC-----FVPNISFGADVIR 55
TP ++ P ++A +FSR + ++ + C FVPN++ GA VI+
Sbjct: 124 TPVEEVFPLVIAQYNFSRSHALFPHAVHNYDINAFLNISNKCSNWEHFVPNLTIGAPVIQ 183
Query: 56 SLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTG 114
SLR ++ + DCHLM+++ ++ +A AG TFH E S + + +++I A G + G
Sbjct: 184 SLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPG 243
Query: 115 VAINPETPVA---ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SI 170
V++ P TPV L + + ++++L+MTV PGFGGQ+ + + K+R AL K S+
Sbjct: 244 VSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVR---ALRKKYPSL 300
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN--QKGEISYAKR 212
+EVDGG+ I AGA+ +V GSS F + GE+ A R
Sbjct: 301 DIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEPGEVISALR 344
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + + GA +H D+M FVPN++ GA VI+SLR ++ +
Sbjct: 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMVTHFVPNLTIGAPVIQSLRKHTKAYL 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM+++ ++ +A AG TFH E S + + +++I A G + GV++ P TPV
Sbjct: 68 DCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPV 126
>gi|16082304|ref|NP_394770.1| ribulose-phosphate 3-epimerase [Thermoplasma acidophilum DSM 1728]
gi|10640658|emb|CAC12436.1| probable ribulose-5-phosphate 3-epimerase [Thermoplasma
acidophilum]
Length = 211
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 6/209 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSI+AA ++ +++ AG+ H DVMDG FVPNI+ G D LRS S +
Sbjct: 3 VSPSIVAASPLKIQDQVRECENAGSVSFHLDVMDGNFVPNITVGPDYYEFLRSISRIRIE 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ D + A G D++ H ES + L+ + G G+ INP+T + +
Sbjct: 63 SHLMVMRPDLYYRKFAKEG-DLVLVHYESPVNTLALLKRMKDEGIDAGIVINPDTSFSKV 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
D+++ ++LIM+V PGF GQ+ I+ + KI +A A I K + +EVDGG+ +
Sbjct: 122 SDLLEYAQILLIMSVYPGFSGQKFIDVS-DKIHEASAFIKKNGLKTKIEVDGGINDNTAR 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGAD++V S F G IS R+
Sbjct: 181 IVKNAGADIVVSASYIFG--GNISERIRI 207
>gi|303244664|ref|ZP_07330996.1| ribulose-phosphate 3-epimerase [Methanothermococcus okinawensis
IH1]
gi|302484972|gb|EFL47904.1| ribulose-phosphate 3-epimerase [Methanothermococcus okinawensis
IH1]
Length = 185
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 38 VMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
+MDG FVPN+S G + + +++ + D HLM+ + D I I+AD D+ITFH E+
Sbjct: 1 MMDGHFVPNLSMGIGISKYIKNITGLPTDVHLMVENPDLFIPILAD-DADMITFHIETCK 59
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
R+++ I G + VA+NP TP+ +E +++++ +LIMTV PGF GQ+ I + K
Sbjct: 60 FPFRTIKLIKDKGAEPIVALNPSTPIDTIEYILEDLCGVLIMTVEPGFSGQKFINPMLKK 119
Query: 158 IRQAKALIGKRSISLE--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
I + K +I K + + VDGG+ S +V+AGAD+L+ S+ +N++
Sbjct: 120 IDRLKNIILKEGYNTKILVDGGINSETAPKVVEAGADVLIAASAIYNKE 168
>gi|329297515|ref|ZP_08254851.1| allulose-6-phosphate 3-epimerase [Plautia stali symbiont]
Length = 219
Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
+H D+MDG +V NI+ I +R ++ D HLM+ I +A+AG D I H
Sbjct: 20 LHIDIMDGHYVKNITLSPFFIEQIRPHTKVAIDMHLMVEEPTDFIEAMANAGADYICPHA 79
Query: 94 ES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
E+ + R + I + GKK GV +NP TPV+ + I +D I +MTV+PG+ GQ I
Sbjct: 80 ETINRDAFRVINLIRSYGKKVGVVLNPATPVSFIHHYIHLLDKITVMTVDPGYTGQPFIP 139
Query: 153 STIPKIRQAKALI---GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS-FFNQKGEIS 208
+ K+++ KAL G R + +E+DG +R +LV AGA +++VG+S FN +++
Sbjct: 140 EMVQKVQELKALKQAHGHRYL-IEIDGSCNTRTYNTLVGAGAKVMIVGTSGLFNIHEDLA 198
Query: 209 YAKRL 213
A +
Sbjct: 199 TAWNM 203
>gi|255656294|ref|ZP_05401703.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-23m63]
gi|296450265|ref|ZP_06892026.1| possible ribulose-phosphate 3-epimerase [Clostridium difficile
NAP08]
gi|296878680|ref|ZP_06902685.1| possible ribulose-phosphate 3-epimerase [Clostridium difficile
NAP07]
gi|296261028|gb|EFH07862.1| possible ribulose-phosphate 3-epimerase [Clostridium difficile
NAP08]
gi|296430487|gb|EFH16329.1| possible ribulose-phosphate 3-epimerase [Clostridium difficile
NAP07]
Length = 221
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 3/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD +L EE+ + +AG K +H DVMDG FV N++ G ++++S+ + D
Sbjct: 4 ICASIMCADQMKLKEELEALEEAGVKLLHCDVMDGIFVKNLAMGPELLKSISENTTIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +I++++ I+FH ESS ++R ++ + G +AI+P+T V +
Sbjct: 64 IHLATETPDKYIDMMSYIKPKYISFHVESSTNVRADIQKLRNYGIGPVLAISPQTSVDKI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+ I ++ IL+MTVNPGF GQ+ S + K+ + ++ +EVDG + IK
Sbjct: 124 EEYIGLVEGILVMTVNPGFAGQKFNLSVLDKLDKLTEILKDYDNPPFIEVDGNINKDTIK 183
Query: 185 SLVQAGADLLVVGSS-FFNQKGEISYAKRLNDLKKS 219
+ D+ VVG+S FN K ISY ++ +LK+S
Sbjct: 184 LMNGKKVDIYVVGTSALFNDKPPISYKDKIKELKES 219
>gi|161527807|ref|YP_001581633.1| ribulose-phosphate 3-epimerase [Nitrosopumilus maritimus SCM1]
gi|160339108|gb|ABX12195.1| ribulose-phosphate 3-epimerase [Nitrosopumilus maritimus SCM1]
Length = 555
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+A D S L E+ A IH DVMDG FVPN +F I+ LR + FD
Sbjct: 293 IAPSIIAGDMSNLENEVKRCVSGRADYIHLDVMDGQFVPNKTFDHIKIKELRPLTVIPFD 352
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----GVAINPETP 122
HLMI+ H+ DAG DIIT H E + S IH + K+ G AINP+T
Sbjct: 353 SHLMINEPVKHVRDYIDAGSDIITVHAEVTD--ESSFGEIHDVLKQNQVGIGFAINPDTE 410
Query: 123 VAILE-DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ I +D +++M+V PG GQ+ IE T K+ + ++ + + S +E DGGV
Sbjct: 411 LPEWSYKFIPSLDQLIVMSVVPGKSGQKYIEETHAKMARLNTILNEHNFSGYIEADGGVN 470
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK 204
NI S+ GA V G + Q+
Sbjct: 471 LENIGSVFADGARAFVGGGAIIGQQ 495
>gi|167043311|gb|ABZ08016.1| putative Ribulose-phosphate 3 epimerase family protein [uncultured
marine crenarchaeote HF4000_ANIW141M18]
Length = 554
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
+ I PSI+A D S L +E+ A IH DVMDG FVPN +F I+ LR
Sbjct: 287 LEAQFMIAPSIIAGDMSNLEKEVKRCVGGRADYIHLDVMDGQFVPNKTFDHTKIKELRPL 346
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAIN 118
+ FD HLMI H++ DAG DIIT H E +H+ G+AIN
Sbjct: 347 TLIPFDAHLMIDEPVKHVHDYVDAGSDIITVHAEVCDESSFGEICDVLHSNEVGIGLAIN 406
Query: 119 PETPV-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P+T + ++ +D ++IM+V PG GQ+ IEST K R+ + + +E D
Sbjct: 407 PDTELPQWCYKFVELLDQVIIMSVVPGKSGQKFIESTHEKTRRVTKDLREHKFEGYVESD 466
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GGV NI + + GA V GS+ Q
Sbjct: 467 GGVNLENIGACFEDGARAFVGGSAIIGQ 494
>gi|261368528|ref|ZP_05981411.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
gi|282569410|gb|EFB74945.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
Length = 226
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S ++ PSILAADFS L ++ AGA H D+MDG FVP ISFG ++R++R+ +
Sbjct: 10 SFELCPSILAADFSCLARDVQAADAAGADAFHIDIMDGHFVPAISFGPGMVRTMRALTRK 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + +A G + ++ H E +L I A G + G+ +NPETPV
Sbjct: 70 PLDVHLMVDRPLDLVAELAALGVERVSVHAEVPGGPGAALAAIRAAGMQGGLVLNPETPV 129
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI--RQAKALIGKRSISLEVDGGVTSR 181
+ I +L+MTV PG GGQ + + +I QA ++++VDGG+T+R
Sbjct: 130 ETAGAYLPLISQLLLMTVQPGRGGQPYLPGSNARIAAAQALLQTAPHPVTIQVDGGITAR 189
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGA +V GS+ F+ G+I A+ + L++S
Sbjct: 190 TLPGAWAAGARSVVAGSAVFD--GDI--ARNIAVLRRS 223
>gi|255072933|ref|XP_002500141.1| sugar kinase and ribulose phosphate 3 epimerase, fused [Micromonas
sp. RCC299]
gi|226515403|gb|ACO61399.1| sugar kinase and ribulose phosphate 3 epimerase, fused [Micromonas
sp. RCC299]
Length = 756
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 73/232 (31%), Positives = 127/232 (54%), Gaps = 23/232 (9%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + PS+L+AD L ++S + GA +H D+MDG FVPN++ G V+ LRS +
Sbjct: 524 PRATVCPSLLSADQGNLAGDVSRMIAEGADWLHVDIMDGHFVPNLTIGPPVVAHLRSQAP 583
Query: 63 SVF-DCHLMISSIDSHINIIADAGCDIITFHPE------SSPHIRRSLRTIHAMGKKTGV 115
F DCHL ++ D+ I+ +A +TFH E + H+ +R+ +G + V
Sbjct: 584 EAFLDCHLSCTNPDALIDGLAVVKASSVTFHFEVMEDAAACAHLAGRIRS---LGMRAAV 640
Query: 116 AINPETPVAILEDVID----EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--S 169
A+ P TP+ + ++D +DM+L ++V PGFGGQ+ K+R + +R
Sbjct: 641 ALKPGTPIESVYPLVDASPPAVDMVLCLSVEPGFGGQKFNPEVCAKVRTLR----RRCPD 696
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +++DGGV + + + AGA++LV GS+ F G ++ + DL+++ +
Sbjct: 697 LDIQMDGGVNTDTVGAAAAAGANVLVAGSAVF---GSPEPSRVIADLRRAVV 745
>gi|323308592|gb|EGA61836.1| Rpe1p [Saccharomyces cerevisiae FostersO]
Length = 201
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 25/201 (12%)
Query: 39 MDGCFVPNISFGADVIRSLR-------------SYSDSVFDCHLMISSIDSHINIIADAG 85
MDG FVPNI+ G ++ SLR + FDCH+M+ + + ++ A G
Sbjct: 1 MDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
D TFH E++ ++ I + G K AI P T V +L ++ +DM L+MTV PGF
Sbjct: 61 ADQFTFHYEATQDPLHLVKLIKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGF 120
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN--- 202
GGQ+ +E +PK+ +A ++++VDGG+ I +AGA+++V G+S F
Sbjct: 121 GGQKFMEDMMPKVETLRAKF--PHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 178
Query: 203 -------QKGEISYAKRLNDL 216
K E+S R DL
Sbjct: 179 PHDVISFMKEEVSKELRSRDL 199
>gi|227878217|ref|ZP_03996189.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus JV-V01]
gi|227862181|gb|EEJ69728.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus JV-V01]
Length = 216
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I S+ + + E + + KA +H DVMD FVP I FG++ + + Y+D
Sbjct: 2 VKIATSLHSGPKLHMSEILDQLKKADVDLLHIDVMDSIFVPEIDFGSNFTKEISQYTDIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+++ IN A + I H E++ + R L I + KK V INP TP+
Sbjct: 62 LDIHMMVNNPSRLINEYALSTTTDIGIHYEATQQLHRDLFQIKQLNKKAEVIINPGTPIN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQ-LIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L V++ +D I++M+V+PG G+ I KI++ L +++ +E DGG+T +
Sbjct: 122 SLSAVLNFVDQIMVMSVDPGCSGKSPFIPEVASKIKKLNQLRKEKNYHYLIEADGGITDK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEI-SYAKRLNDLK 217
N+K LV G D+ V GS FN G+I ++L ++K
Sbjct: 182 NLKVLVDNGLDIAVSGSFIFN--GDIRQQVQKLKEIK 216
>gi|148993156|ref|ZP_01822722.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP9-BS68]
gi|147928130|gb|EDK79148.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP9-BS68]
Length = 150
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 97/152 (63%), Gaps = 6/152 (3%)
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV ++ V
Sbjct: 1 MVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEAIKHV 60
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLV 187
+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 61 LHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTIAQAK 120
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F KGE++ +R+ L+K
Sbjct: 121 EAGATVFVAGSYVF--KGEVN--ERVQTLRKQ 148
>gi|76788708|ref|YP_330358.1| allulose-6-phosphate 3-epimerase [Streptococcus agalactiae A909]
gi|77406734|ref|ZP_00783772.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae H36B]
gi|77411625|ref|ZP_00787966.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae CJB111]
gi|76563765|gb|ABA46349.1| D-allulose-6-phosphate 3-epimerase [Streptococcus agalactiae A909]
gi|77162342|gb|EAO73312.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae CJB111]
gi|77174665|gb|EAO77496.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae H36B]
Length = 229
Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ + + EEI + H D+MDG FVPNI+ + +R S
Sbjct: 4 VEISPSLMCMNLDKFQEEIC-FLDSHVDSYHIDIMDGHFVPNITLSPWFVEEVRKLSSLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
HLM+ + + D C+ I H E + R + IH G K GV +NPETP+
Sbjct: 63 MSAHLMVKDQPFWVQQMIDIKCEWICMHAEVINGLAFRLIDQIHNEGLKAGVVLNPETPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++ I+ +D + IMTV+PGF GQ+ ++ST+ KI + L + + + +E+DG + +
Sbjct: 123 EVIMPYIELLDKVTIMTVDPGFAGQRFLDSTLDKIVDLRRLREENNYNYLIEMDGSSSRK 182
Query: 182 NIKSLVQAGADLLVVGSS 199
K + +AG D+ +VG S
Sbjct: 183 TFKKIDEAGPDIYIVGRS 200
>gi|315150579|gb|EFT94595.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0012]
gi|315172354|gb|EFU16371.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1346]
Length = 229
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH KTG+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKTGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|325568993|ref|ZP_08145286.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
gi|325158031|gb|EGC70187.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
Length = 230
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PS++ D + E+I+ + H D+MDG +VPNIS I+ +R S
Sbjct: 4 VEFSPSLMTMDLDKFKEQITFLNDQ-VDSYHIDIMDGHYVPNISLSPWFIQEVRKISTLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
HLM++ + + D C+ I H E + R + IH G K G+ +NPETPV
Sbjct: 63 LSAHLMVTEPAFWVQQLIDINCEWICMHAEVLDGLAFRLIDQIHDAGLKAGIVLNPETPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+++ ID +D + IMTV+PGF GQ+ IE + KI + + L + +E+DG +
Sbjct: 123 SVILPYIDRLDKVTIMTVDPGFTGQRFIEGALDKIVELRELREEYDYHYVIEMDGSSNRK 182
Query: 182 NIKSLVQAGADLLVVGSS 199
+ K + +A D+ +VG S
Sbjct: 183 SFKRIDEANPDIYIVGRS 200
>gi|167045416|gb|ABZ10071.1| putative Ribulose-phosphate 3 epimerase family protein [uncultured
marine crenarchaeote HF4000_APKG10F15]
Length = 519
Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
+ I PSI+A D S L +E+ A IH DVMDG FVPN +F I+ LR
Sbjct: 251 LESQFMIAPSIIAGDMSNLEKEVKQCVVGRADYIHLDVMDGQFVPNKTFDHTKIKELRPL 310
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAIN 118
+ FD HLMI H++ DAG DIIT H E +H+ G+AIN
Sbjct: 311 TLIPFDAHLMIDEPVKHVSNYIDAGSDIITVHAEVCDESTFGEICDMLHSNEVGIGLAIN 370
Query: 119 PETPV-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P+T + ++ +D I+IM+V PG GQ+ IEST K R+ + + +E D
Sbjct: 371 PDTELPQWCYKFVELLDQIIIMSVVPGKSGQKFIESTHEKTRRIAKDLKEHKFEGYIEAD 430
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GGV NI + + GA V GS+ Q
Sbjct: 431 GGVNLENIGACFEDGARAFVGGSAIIGQ 458
>gi|159137082|gb|ABW88688.1| ribulose-phosphate 3-epimerase [Trypanosoma cruzi]
Length = 247
Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 8/204 (3%)
Query: 7 IVPSILAADFSRLGEEISNI--TKAGA-KQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSI+ AD ++L E ++ + GA + +H DV+DG F PN+SF +D + LR +
Sbjct: 25 ISPSIMVADPTQLLLEALHVLSPEGGAVEWLHVDVIDGHFAPNMSFCSDTVAGLRRHLPH 84
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VF D HLM++ + + ADAG TFH E++ I G + GVAI+P T
Sbjct: 85 VFLDVHLMVAEPEKWVRPFADAGASQFTFHIEATQEPVALASKIREAGMQVGVAISPRTA 144
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ L +I+ +DM+L+MTV PGF GQ+ + + K+RQ + ++++VDG +
Sbjct: 145 IDGLIPLIENGHLDMVLVMTVEPGFAGQKFLSEPLAKVRQLRGRYPH--LNIQVDGSINL 202
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ AGA+ LV G + F K
Sbjct: 203 VTVDEAALAGANCLVPGQAVFKAK 226
>gi|157692525|ref|YP_001486987.1| allulose-6-phosphate 3-epimerase [Bacillus pumilus SAFR-032]
gi|157681283|gb|ABV62427.1| ribulose-phosphate 3-epimerase [Bacillus pumilus SAFR-032]
Length = 230
Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E I +I A + H DVMDG +V NI+ I LR +D D H
Sbjct: 7 PSLMCMDLTHFREHI-HILNTRADRYHVDVMDGHYVKNITLSPFFIEQLRKLTDKPIDVH 65
Query: 69 LMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAIL 126
LM S I+ DAG ++ HPE + R +R IH + G +NP TP+A+L
Sbjct: 66 LMAESPQEFLIDACIDAGASMVCLHPEVVQRDVFRIIRHIHQRDCEVGFVLNPATPIAVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+ + ID + IMT++PGF GQ I+ + KI+Q K + K S S+EVDG +
Sbjct: 126 DSYLHLIDRVTIMTIDPGFAGQPFIKEMLQKIKQVKEVKEKKGYSFSIEVDGSCNEHTFR 185
Query: 185 SLVQAGADLLVVGSS 199
L +AG ++ ++G+S
Sbjct: 186 QLAEAGNEIYIIGNS 200
>gi|261327892|emb|CBH10869.1| ribulose-phosphate 3-epimerase putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 116/204 (56%), Gaps = 8/204 (3%)
Query: 7 IVPSILAADFSRLGEEISNI--TKAGA-KQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PS++ AD ++L + ++ + GA + +H DV+DG F PN+SF D + LR +
Sbjct: 25 ISPSLMVADPTQLLLDSLHVLSPEGGAVEWLHVDVIDGHFAPNMSFCPDTVVGLRRHLPR 84
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F D HLM++ + + A+AG TFH E++ R I A+G + G+AI+P T
Sbjct: 85 AFLDIHLMVTEPEKWVRPFANAGASQFTFHLEAANDAMMLAREIRAVGMQVGIAISPHTA 144
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ L +ID +DM+L+MTV PGF GQ+ +E + K++Q + + ++++VDG +
Sbjct: 145 IDALIPLIDGGFMDMVLVMTVVPGFAGQKFMEGPLEKVKQLRERYPQ--LNIQVDGSINL 202
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ + AGA+ LV G + F K
Sbjct: 203 DTVNVVAAAGANCLVPGQAVFKAK 226
>gi|126699937|ref|YP_001088834.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile 630]
gi|254975902|ref|ZP_05272374.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-66c26]
gi|255093288|ref|ZP_05322766.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile CIP
107932]
gi|255101468|ref|ZP_05330445.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-63q42]
gi|255307341|ref|ZP_05351512.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile ATCC
43255]
gi|255315035|ref|ZP_05356618.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-76w55]
gi|255517705|ref|ZP_05385381.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-97b34]
gi|255650817|ref|ZP_05397719.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-37x79]
gi|260683898|ref|YP_003215183.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
CD196]
gi|260687558|ref|YP_003218692.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
R20291]
gi|306520714|ref|ZP_07407061.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-32g58]
gi|115251374|emb|CAJ69206.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile]
gi|260210061|emb|CBA64148.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
CD196]
gi|260213575|emb|CBE05348.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
R20291]
Length = 221
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 3/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD +L EE+ + +AG K +H DVMDG FV N++ G ++++S+ + D
Sbjct: 4 ICASIMCADQMKLKEELEALEEAGVKLLHCDVMDGIFVKNLAMGPELLKSISENTTIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL + D +I++++ I+FH ESS +++ ++ + G +AI+P+T V +
Sbjct: 64 IHLATETPDKYIDMMSYIKPKYISFHVESSTNVKADIQKLRNYGIGPVLAISPQTSVDKI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+ I ++ IL+MTVNPGF GQ+ S + K+ + ++ +EVDG + IK
Sbjct: 124 EEYISLVEGILVMTVNPGFAGQKFNLSVLDKLDKLTEILKDYDNPPFIEVDGNINKDTIK 183
Query: 185 SLVQAGADLLVVGSS-FFNQKGEISYAKRLNDLKKS 219
+ D+ VVG+S FN K ISY ++ +LK+S
Sbjct: 184 LMNGKKVDIYVVGTSALFNDKPPISYKDKIEELKES 219
>gi|42560853|ref|NP_975304.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|42492350|emb|CAE76946.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|301321082|gb|ADK69725.1| putative ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 225
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++ D D
Sbjct: 6 IAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNIDINVD 65
Query: 67 CHLMIS----SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT---GVAINP 119
H M+S + + A +++T H ES ++ I K +AI+P
Sbjct: 66 VHFMVSVKTKQFEDFFSDYIKAKPEMMTMHIESLKDNNTIIKFIDLCKKNNILASLAISP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
+T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI+ L ++ +EVDGG
Sbjct: 126 KTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFISSSLEKIQILDQLRKEKKYKYIIEVDGG 185
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ + + QAG D++V GS F G + KR
Sbjct: 186 INEQTSVLVKQAGVDMIVAGSYLF---GSGDFTKR 217
>gi|313622154|gb|EFR92710.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL J1-023]
Length = 148
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 91/146 (62%), Gaps = 2/146 (1%)
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L+ +
Sbjct: 1 MLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVLDAI 60
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLV 187
+ ++D++L MTVNPGFGGQ I+STI +R + + +EVDGGV + +
Sbjct: 61 LGDVDLVLQMTVNPGFGGQSFIDSTIENMRYLDNWRRENNGGYVIEVDGGVNAETAEKCK 120
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRL 213
QAG D+LV GS FF +++ + L
Sbjct: 121 QAGVDVLVAGSYFFGADDKVACVQGL 146
>gi|238916225|ref|YP_002929742.1| ribulose-phosphate 3-epimerase [Eubacterium eligens ATCC 27750]
gi|238871585|gb|ACR71295.1| ribulose-phosphate 3-epimerase [Eubacterium eligens ATCC 27750]
Length = 218
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ S++ A+F L +E+ + AG H D+MDG +VPN + + +R +RS +D
Sbjct: 4 ELTASMMCANFGNLEKEVRELDAAGIDSFHIDIMDGRYVPNFAMSLNDMRYIRSATDKPL 63
Query: 66 DCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI ++HIN+ ++ D + HPE+ H +L+ I G G+AINP T +
Sbjct: 64 DVHLMIEHPNTHINLFLNSLKEGDTVYIHPEAEYHPSTTLQKIINAGLIPGIAINPGTSI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +++ +D +L+M+VNPG GQ + KI + + + + + DG + I
Sbjct: 124 ETVMEMLQIVDKVLVMSVNPGNAGQMYLPYVGKKIERLLKIREEMNFEVYWDGACGADKI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ G V+G++ KG YA L ++++
Sbjct: 184 STFAPMGVKGFVLGTTLLFGKGR-PYADILKEIRR 217
>gi|256383798|gb|ACU78368.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384628|gb|ACU79197.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. capri
str. GM12]
Length = 225
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++ D D
Sbjct: 6 IAPSVLSANFMELKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNIDINVD 65
Query: 67 CHLMIS----SIDSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAINP 119
H M+S + + A +++T H ES I + + +AI+P
Sbjct: 66 VHFMVSVKTKQFEDFFSDYIKAKPEMMTMHIESLKDDNTINKFIDLCKQNNILASLAISP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
+T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI+ L ++ ++EVDGG
Sbjct: 126 KTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFISSSLEKIQILDQLRNTKNYKYTIEVDGG 185
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ + + QAG D++V GS F G + KR
Sbjct: 186 INEQTSVLVKQAGVDMIVAGSYLF---GSDDFTKR 217
>gi|256958940|ref|ZP_05563111.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DS5]
gi|257078971|ref|ZP_05573332.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis JH1]
gi|294779110|ref|ZP_06744521.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
PC1.1]
gi|307271060|ref|ZP_07552343.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX4248]
gi|256949436|gb|EEU66068.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DS5]
gi|256987001|gb|EEU74303.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis JH1]
gi|294453835|gb|EFG22226.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
PC1.1]
gi|306512558|gb|EFM81207.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX4248]
gi|315033926|gb|EFT45858.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0017]
gi|315036936|gb|EFT48868.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0027]
gi|323480683|gb|ADX80122.1| ribulose-phosphate 3 epimerase family protein [Enterococcus
faecalis 62]
Length = 229
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I+ LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIKELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|229827841|ref|ZP_04453910.1| hypothetical protein GCWU000182_03233 [Abiotrophia defectiva ATCC
49176]
gi|229788040|gb|EEP24154.1| hypothetical protein GCWU000182_03233 [Abiotrophia defectiva ATCC
49176]
Length = 227
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S++ DF + +I ++ H DVMDG F NI+ D+I+++ + D HL
Sbjct: 8 SLMCMDFLDMKNQI-DVLNEEFDGYHMDVMDGHFCKNITLSPDIIKAVGKAAKKPMDVHL 66
Query: 70 MISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M + + I A+AG ++I+ H E+ + + R++ I +G KTGV +NP TP+A ++
Sbjct: 67 MTTEPNDWIKSCAEAGAELISPHAETINTNAFRTINRIKDLGCKTGVTLNPATPLAYCKE 126
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNIKSL 186
+ ID++ IMTV+ GF GQ I + KI++AK L + + +DG + K L
Sbjct: 127 YLGRIDVLTIMTVDVGFAGQPFIREMLDKIKEAKKLREENGWHYQIMIDGSCNKKTFKDL 186
Query: 187 VQAGADLLVVGSS 199
AGA+ ++GSS
Sbjct: 187 YAAGAECFILGSS 199
>gi|71421786|ref|XP_811905.1| ribulose-phosphate 3-epimerase [Trypanosoma cruzi strain CL Brener]
gi|70876622|gb|EAN90054.1| ribulose-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 247
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 111/204 (54%), Gaps = 8/204 (3%)
Query: 7 IVPSILAADFSRLGEEISNI--TKAGA-KQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSI+ AD ++L E ++ + GA + +H DV+DG F PN+SF +D + LR +
Sbjct: 25 ISPSIMVADPTQLLLEALHVLSPEGGAVEWLHVDVIDGHFAPNMSFCSDTVAGLRRHLPH 84
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VF D HLM++ + + ADAG TFH E++ I G + GVAI+P T
Sbjct: 85 VFLDVHLMVAEPEKWVRPFADAGASQFTFHIEATQEPVALASKIREAGMQVGVAISPRTA 144
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ L +I+ +DM L+MTV PGF GQ+ + + K+RQ + ++++VDG +
Sbjct: 145 IDGLIPLIENGHLDMALVMTVEPGFAGQKFLSGPLAKVRQLRGRYPH--LNIQVDGSINL 202
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ AGA+ LV G + F K
Sbjct: 203 DTVNEAALAGANCLVPGQAVFKAK 226
>gi|306822194|ref|ZP_07455576.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|309802245|ref|ZP_07696353.1| putative ribulose-phosphate 3-epimerase [Bifidobacterium dentium
JCVIHMP022]
gi|304554576|gb|EFM42481.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|308221128|gb|EFO77432.1| putative ribulose-phosphate 3-epimerase [Bifidobacterium dentium
JCVIHMP022]
Length = 232
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 111/201 (55%), Gaps = 6/201 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP + S++ DFS GE++S +++ A +H D+MDG F PN+S + ++ + +S
Sbjct: 3 TPKFAV--SLMCMDFSIAGEQVSTLSQH-ADSLHLDIMDGHFAPNLSLSPEWLKWVLPHS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM + D + +A G ++I+ H E+ + H R++ +I A+G TG+ +NP
Sbjct: 60 SVRNEAHLMTTDPDYWLEPLAQVGVNVISPHAETLNTHAFRTMNSIRALGCGTGLVVNPL 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGV 178
T + +I+ +D++ +MT++ GF GQ I+ + KI QA + E +DG
Sbjct: 120 TTFESILPLIERVDLLTLMTIDVGFAGQPFIDEMLAKIEQAAKYKSDHGLDYEIQIDGSC 179
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ + L AGA+ ++G+S
Sbjct: 180 SEKTFAKLRNAGAETFILGNS 200
>gi|331703256|ref|YP_004399943.1| Ribulose phosphate 3 epimerase [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|328801811|emb|CBW53964.1| Ribulose phosphate 3 epimerase [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 225
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 115/215 (53%), Gaps = 12/215 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++ D D
Sbjct: 6 IAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNIDINVD 65
Query: 67 CHLMIS----SIDSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAINP 119
H M+S + + A +++T H ES I + + +AI+P
Sbjct: 66 VHFMVSVKTKQFEEFFSDYIKAKPEMMTMHIESLKDDNTINKFIDLCKQNNILASLAISP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
+T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI+ L ++ ++EVDGG
Sbjct: 126 KTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFISSSLEKIQILDQLRNTKNYKYTIEVDGG 185
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ + + QAG D++V GS F G + KR
Sbjct: 186 INEQTSVLVKQAGVDMIVAGSYLF---GSDDFTKR 217
>gi|47459396|ref|YP_016258.1| ribulose-phosphate 3-epimerase [Mycoplasma mobile 163K]
gi|47458726|gb|AAT28047.1| ribulose-5-phosphate 3-epimerase [Mycoplasma mobile 163K]
Length = 218
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 115/197 (58%), Gaps = 7/197 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS-VF 65
I PS+L + S+ E + + + G K IH+D MDG FVP + + ++ S S +
Sbjct: 4 ISPSLLNVEESKRAEIATKMIELGIKWIHYDFMDGKFVPETAISFENYMEIKEKSPSHIK 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + ++ + + ITFH E+ + I++ L+ H + +K G+A+ P+T +
Sbjct: 64 DIHLMVQDVSFYVEKFLNK-AEYITFHFEALNYNEIKKILKKYHGL-QKFGIALKPKTNI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
+ + + +D++LIM+V PG+GGQ+ I +++ KI + K + +RS I ++VDGG+
Sbjct: 122 EQIYEYLPYVDLVLIMSVEPGYGGQKFIPNSLEKITKLKKYLLERSLDIVIQVDGGINEE 181
Query: 182 NIKSLVQAGADLLVVGS 198
+ ++GAD+LV GS
Sbjct: 182 SGPQAFESGADILVSGS 198
>gi|309778127|ref|ZP_07673064.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914133|gb|EFP59936.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 227
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D ++ E+I I + A H D+MDG FV NI+ D + ++ S DCHLM+++
Sbjct: 2 DLLKIKEQI-QILNSHADFYHIDIMDGHFVKNITLSPDFVEAISRISSVPLDCHLMVTNP 60
Query: 75 DSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D +I +A A I+ E+ + R L IH +G K G+ +NP TP++ ++ + +
Sbjct: 61 DDYIVTLAKAKAAYISPQAETINSDAFRILHKIHDLGCKAGIVLNPATPLSYVQHYLHLV 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGA 191
D I IM+V+PGF GQ I + KI++A+ L K +EVDG + L AG
Sbjct: 121 DKITIMSVDPGFAGQAFIREMLDKIKEARKLKAKHGYHYLIEVDGSCNAATFSELRDAGV 180
Query: 192 DLLVVGSSFFNQKGE 206
++ +VG+S Q E
Sbjct: 181 EVFIVGNSGLFQLDE 195
>gi|188592991|emb|CAQ55499.1| ribulose-phosphate 3-epimerase, putative [Trypanosoma brucei
TREU927]
Length = 247
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 8/204 (3%)
Query: 7 IVPSILAADFSRLGEEISNI--TKAGA-KQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PS++ AD ++L + ++ + GA + +H DV+DG F PN+SF D + LR +
Sbjct: 25 ISPSLMVADPTQLLLDSLHVLSPEGGAVEWLHVDVIDGHFAPNMSFCPDTVVGLRRHLPR 84
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F D HLM++ + + A+AG TFH E++ R I A+G + G+AI+P T
Sbjct: 85 AFLDIHLMVTEPEKWVRPFANAGASQFTFHLEAANDAMVLAREIRAVGMQVGIAISPHTA 144
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ L +ID +DM+L+MTV PGF GQ+ +E + K++Q + ++++VDG +
Sbjct: 145 IDALIPLIDGGFMDMVLVMTVVPGFAGQKFMEGPLEKVKQLRERYP--HLNIQVDGSINL 202
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ + AGA+ LV G + F K
Sbjct: 203 DTVNVVAAAGANCLVPGQAVFKAK 226
>gi|283456637|ref|YP_003361201.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium Bd1]
gi|283103271|gb|ADB10377.1| Ribulose-phosphate 3-epimerase [Bifidobacterium dentium Bd1]
Length = 232
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 111/201 (55%), Gaps = 6/201 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP + S++ DFS GE++S +++ A +H D+MDG F PN+S + ++ + +S
Sbjct: 3 TPKFAV--SLMCMDFSIAGEQVSTLSQH-ADSLHLDIMDGHFAPNLSLSPEWLKWVLPHS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM + D + +A G ++I+ H E+ + H R++ +I A+G TG+ +NP
Sbjct: 60 SVRNEAHLMTTDPDYWLEPLAQVGVNVISPHAETLNTHAFRTMNSIRALGCGTGLVVNPL 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGV 178
T + +I+ +D++ +MT++ GF GQ I+ + KI QA + E +DG
Sbjct: 120 TTFESILPLIERVDLLTLMTIDVGFAGQPFIDEMLAKIEQAAKYKSDHGLDYEIQIDGSC 179
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ + L AGA+ ++G+S
Sbjct: 180 SEKTFAKLRNAGAETFILGNS 200
>gi|256965165|ref|ZP_05569336.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HIP11704]
gi|257086786|ref|ZP_05581147.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis D6]
gi|307273267|ref|ZP_07554513.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0855]
gi|256955661|gb|EEU72293.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HIP11704]
gi|256994816|gb|EEU82118.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis D6]
gi|306510252|gb|EFM79276.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0855]
gi|315027309|gb|EFT39241.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX2137]
gi|315169684|gb|EFU13701.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1342]
Length = 229
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH KTG+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKTGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|171742252|ref|ZP_02918059.1| hypothetical protein BIFDEN_01358 [Bifidobacterium dentium ATCC
27678]
gi|171277866|gb|EDT45527.1| hypothetical protein BIFDEN_01358 [Bifidobacterium dentium ATCC
27678]
Length = 288
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 111/201 (55%), Gaps = 6/201 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP + S++ DFS GE++S +++ A +H D+MDG F PN+S + ++ + +S
Sbjct: 59 TPKFAV--SLMCMDFSIAGEQVSTLSQH-ADSLHLDIMDGHFAPNLSLSPEWLKWVLPHS 115
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM + D + +A G ++I+ H E+ + H R++ +I A+G TG+ +NP
Sbjct: 116 SVRNEAHLMTTDPDYWLEPLAQVGVNVISPHAETLNTHAFRTMNSIRALGCGTGLVVNPL 175
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGV 178
T + +I+ +D++ +MT++ GF GQ I+ + KI QA + E +DG
Sbjct: 176 TTFESILPLIERVDLLTLMTIDVGFAGQPFIDEMLAKIEQAAKYKSDHGLDYEIQIDGSC 235
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ + L AGA+ ++G+S
Sbjct: 236 SEKTFAKLRNAGAETFILGNS 256
>gi|300860858|ref|ZP_07106945.1| D-allulose-6-phosphate 3-epimerase [Enterococcus faecalis TUSoD
Ef11]
gi|300849897|gb|EFK77647.1| D-allulose-6-phosphate 3-epimerase [Enterococcus faecalis TUSoD
Ef11]
gi|315144459|gb|EFT88475.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX2141]
gi|315160488|gb|EFU04505.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0645]
Length = 229
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|256961967|ref|ZP_05566138.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|257089843|ref|ZP_05584204.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis CH188]
gi|293383038|ref|ZP_06628956.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|293389474|ref|ZP_06633931.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|312903264|ref|ZP_07762444.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0635]
gi|312907492|ref|ZP_07766483.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|312910110|ref|ZP_07768957.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
gi|256952463|gb|EEU69095.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|256998655|gb|EEU85175.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis CH188]
gi|291079703|gb|EFE17067.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|291081091|gb|EFE18054.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|310626520|gb|EFQ09803.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|310633140|gb|EFQ16423.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0635]
gi|311289383|gb|EFQ67939.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
gi|315577576|gb|EFU89767.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0630]
Length = 229
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|257085225|ref|ZP_05579586.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Fly1]
gi|256993255|gb|EEU80557.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Fly1]
Length = 229
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++S +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKSYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWRM 215
>gi|229545866|ref|ZP_04434591.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|256853083|ref|ZP_05558453.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T8]
gi|307292038|ref|ZP_07571907.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0411]
gi|229309021|gb|EEN75008.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|256711542|gb|EEU26580.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T8]
gi|306497036|gb|EFM66584.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0411]
gi|315029427|gb|EFT41359.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX4000]
Length = 229
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 109/214 (50%), Gaps = 7/214 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 4 VEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP+
Sbjct: 63 VSAHLMVTNPSFWVPQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTS 180
+ I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 123 ESIFSYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYV-IEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|307289062|ref|ZP_07569018.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0109]
gi|306499771|gb|EFM69132.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0109]
Length = 238
Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I+ LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIKELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|83319580|ref|YP_424246.1| ribulose-phosphate 3-epimerase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283466|gb|ABC01398.1| ribulose-phosphate 3-epimerase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 225
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 14/216 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++ D D
Sbjct: 6 IAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNIDINVD 65
Query: 67 CHLMISSI-----DSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAIN 118
H M++ D ++ I A +++T H ES + I + + +AI+
Sbjct: 66 VHFMVNVKTKQFEDFFLDYIK-AKPEMMTMHIESLKDNSTINKFINLCKQNNILASLAIS 124
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDG 176
P T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI L K ++EVDG
Sbjct: 125 PNTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFITSSLKKIEILDQLRKEKKYKYTIEVDG 184
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
G+ + + QAG D++V GS F G + KR
Sbjct: 185 GINEQTSVLVKQAGVDMIVAGSYLF---GSDDFTKR 217
>gi|312900717|ref|ZP_07760014.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0470]
gi|311292198|gb|EFQ70754.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0470]
gi|315169079|gb|EFU13096.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1341]
gi|327535090|gb|AEA93924.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis OG1RF]
Length = 229
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWKM 215
>gi|313665197|ref|YP_004047068.1| ribulose-phosphate 3-epimerase [Mycoplasma leachii PG50]
gi|312949523|gb|ADR24119.1| putative ribulose-phosphate 3-epimerase [Mycoplasma leachii PG50]
Length = 225
Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 18/218 (8%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++ D D
Sbjct: 6 IAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNIDINVD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK----------KTGVA 116
H M++ D D I PE SL+ + + K +A
Sbjct: 66 VHFMVNVKTKQ---FEDFFLDYIKAKPEMMTMHIESLKDNNTINKFIDLCKQNNILASLA 122
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEV 174
I+P T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI L K ++EV
Sbjct: 123 ISPNTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFITSSLKKIEILDQLRKEKKYKYTIEV 182
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
DGG+ + + QAG D++V GS F G + KR
Sbjct: 183 DGGINEQTSVLVKQAGVDMIVAGSYLF---GSDDFTKR 217
>gi|307275004|ref|ZP_07556167.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX2134]
gi|306508452|gb|EFM77559.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX2134]
Length = 229
Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 6/200 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D ++ ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLNKFKQQITFLNDHVA-SYHIDIMDGRYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVGSS 199
+ K + AG D+ +VG S
Sbjct: 181 RNSFKRIDAAGPDIYIVGRS 200
>gi|229550058|ref|ZP_04438783.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 29200]
gi|255972837|ref|ZP_05423423.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T1]
gi|257422660|ref|ZP_05599650.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis X98]
gi|312951450|ref|ZP_07770347.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0102]
gi|229304762|gb|EEN70758.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 29200]
gi|255963855|gb|EET96331.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T1]
gi|257164484|gb|EEU94444.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis X98]
gi|310630606|gb|EFQ13889.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0102]
gi|315152526|gb|EFT96542.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0031]
gi|315155804|gb|EFT99820.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0043]
gi|315158029|gb|EFU02046.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0312]
Length = 229
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|257419256|ref|ZP_05596250.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T11]
gi|257161084|gb|EEU91044.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T11]
Length = 229
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++S +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKSYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|296090234|emb|CBI40053.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 8/164 (4%)
Query: 43 FVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS 102
FVPN++ GA VI SLR ++++ DCHLM+++ ++ + AG TFH E S +
Sbjct: 111 FVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEVSKENWQE 170
Query: 103 L-RTIHAMGKKTGVAINPETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKI 158
L I + G + GVA+ P TP+ + +++ ++M+L+MTV PGFGGQ+ + + K+
Sbjct: 171 LVERIRSKGMRPGVALKPGTPIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPEMMDKV 230
Query: 159 RQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
R AL K S+ +EVDGG+ I AGA+ +V GSS F
Sbjct: 231 R---ALRKKYPSLDIEVDGGLGPSTIDMAASAGANCIVAGSSVF 271
>gi|315163972|gb|EFU07989.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1302]
Length = 238
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 6/200 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVGSS 199
+ K + AG D+ +VG S
Sbjct: 181 RNSFKRIDAAGPDIYIVGRS 200
>gi|152970296|ref|YP_001335405.1| allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955145|gb|ABR77175.1| D-allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 215
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D ++ E+I+ + K A H D+MDG +V NI+ I +L+ + D HLM++
Sbjct: 2 DLTQFKEQITAMNKK-ADFYHVDIMDGNYVRNITLSPFFIENLKKITTVPIDVHLMVNHP 60
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+ I + +AG DII+FHPE++ + I R L I GKK GV +NP TP + + +
Sbjct: 61 EDIIPMCLEAGADIISFHPETANNKIFRLLNQIKDAGKKCGVVLNPATPAESIAEYAHLL 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS-----LEVDGGVTSRNIKSLVQ 188
D + +M+V+PG+ GQ+ I ++ KIR+ LI R + E+DG + + +
Sbjct: 121 DKVTVMSVDPGYAGQKFIPESLNKIRK---LINMRKNNGYHYLTEIDGSCNEKTFGQIAE 177
Query: 189 AGADLLVVGSS-FFNQKGEISYA 210
+G D+ +VG+S F+ ++S A
Sbjct: 178 SGVDVFIVGTSGLFSLHEDVSQA 200
>gi|293416932|ref|ZP_06659569.1| ribulose-phosphate 3-epimerase [Escherichia coli B185]
gi|291431508|gb|EFF04493.1| ribulose-phosphate 3-epimerase [Escherichia coli B185]
Length = 236
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 5/208 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I + PS++ AD L + + + + G +H D++D F P++ G + I+ LR ++
Sbjct: 4 PKIVLSPSLMCADLLNLSDAVKALEEIGVDALHIDLIDSAFSPSMPLGLETIKQLRKATN 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD H+M + + I + + G ++FH E+S H R + I + GVA+NP T
Sbjct: 64 LPFDIHIMSMNNEWFIQQVLEIGVQRVSFHYETSLHPDRLVNLIKKHNVEVGVALNPATS 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGG---QQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
+ L+ ++ +D +L+M +NPGF G + + I K+R + I +++VDG
Sbjct: 124 LTSLDYLLPSLDYVLLMLINPGFAGDKNETQVPYAIEKVRNLREKICGIDSGAAIQVDGR 183
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKG 205
V+ +I L+ AGA+ LV+GS+ KG
Sbjct: 184 VSFASIPGLIAAGANNLVLGSTGLFIKG 211
>gi|115522600|ref|YP_779511.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris BisA53]
gi|115516547|gb|ABJ04531.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris
BisA53]
Length = 228
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 112/206 (54%), Gaps = 4/206 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI ++PS++ + ++ + + ++H D+MDG F +I +R++RS +
Sbjct: 9 SIHLLPSLMCLSPLDVRRDLETLCRY-FDEVHVDIMDGHFCNSIHLSPSFVRAIRSVCSA 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + + +++ + AG ITFH E+ P + R + I G G+A+ P T
Sbjct: 68 KIDVHLMVENPEMYVDQLVLAGASSITFHVEAVPRSVNRLIARIRQHGVGVGLALCPSTS 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTS 180
+ +L+D++ ++D I I+ V+PGF GQ++ T +I+ A L + + L VDGGV
Sbjct: 128 LQVLDDLLPKVDRITILGVDPGFVGQEISSGTTKRIQYASELRRVHHAHVDLCVDGGVRW 187
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGE 206
N + L +GAD L++G KGE
Sbjct: 188 TNWRELAASGADSLILGYGALFDKGE 213
>gi|295112955|emb|CBL31592.1| Pentose-5-phosphate-3-epimerase [Enterococcus sp. 7L76]
Length = 229
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVA-SYHIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVT 179
+ I+ +D I IMTV+PGF GQ+ IE T+ KI R + G R + +E+DG
Sbjct: 122 IESTFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYV-IEMDGSSN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 181 RNSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|188025856|ref|ZP_02960067.2| hypothetical protein PROSTU_01971 [Providencia stuartii ATCC 25827]
gi|188020750|gb|EDU58790.1| hypothetical protein PROSTU_01971 [Providencia stuartii ATCC 25827]
Length = 210
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 111/207 (53%), Gaps = 2/207 (0%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD LG I+ + +H D+ DG F+ NI+FG +++++ ++ H
Sbjct: 6 PSLASADPLWLGSIINKLANQNIGSLHLDIEDGNFINNITFGIKLVKAVAQATEHALSIH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+S I +A I FHPE+ + + I + K G+A+NP TPVA +
Sbjct: 66 LMVSQPLFWIRELAPFSPKWIFFHPEAVQNPSEIIAEIKKIKAKAGIALNPSTPVAPYQY 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+I+++D +++MT P QQ I S + KI+Q L + + DGG+++ I+SL +
Sbjct: 126 LINKLDALMLMTSEPDGENQQFIPSIVDKIQQIPPLFSQ--LEYWADGGISADKIQSLKK 183
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLND 215
G + LV+G + F+ + K+L++
Sbjct: 184 VGINNLVIGRALFSTDDYENTIKQLSN 210
>gi|300937951|ref|ZP_07152736.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
gi|300457048|gb|EFK20541.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
Length = 243
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I + PS++ AD L + + + + G +H D++D P++ G + I+ LR ++
Sbjct: 11 PKIVLSPSLMCADLLNLSDAVKALEEIGVDALHIDLIDSASSPSMPLGLETIKQLRKATN 70
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD H+M + + I + + G ++FH E+S H R + I + GVA+NP T
Sbjct: 71 LPFDIHIMSMNNEWFIQQVLEIGVQRVSFHYETSLHPDRLVNLIKKHNVEAGVALNPATS 130
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP----KIRQAKALIG--KRSISLEVDG 176
+ L+ ++ +D +L+M +NPGF G + E+ +P K+R + I S++++VDG
Sbjct: 131 LTSLDYLLPSLDYVLLMLINPGFAGDK-NETQVPYAMEKVRNLREKICGLDASVAIQVDG 189
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
V+ +I L+ AGA+ LV+GS+ KG
Sbjct: 190 RVSFASIPGLIAAGANNLVLGSTGLFIKG 218
>gi|328958600|ref|YP_004375986.1| D-allulose-6-phosphate 3-epimerase [Carnobacterium sp. 17-4]
gi|328674924|gb|AEB30970.1| D-allulose-6-phosphate 3-epimerase [Carnobacterium sp. 17-4]
Length = 229
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS++ D + E+I+ + H D+MDG +VPNI+ I +R SD H
Sbjct: 8 PSLMTMDLDKFKEQITFLNHH-VDSYHIDIMDGHYVPNITLSPWFIEEVRKISDLPMSVH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILE 127
LM++ + + D C+ I H E + R + I G K GV +NPETP+ +
Sbjct: 67 LMVTDPSFWVQQLVDMKCEWICMHAEVLDGLAFRLIDQIQDAGLKAGVVLNPETPIETIF 126
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSRNIK 184
I+ +D I IMTV+PGF GQ+ I+ST+ KI R+ + G + + +E+DG ++ K
Sbjct: 127 PYIELVDKITIMTVDPGFAGQRFIDSTLDKIVALRELREANGYQYV-IEMDGSSNRKSFK 185
Query: 185 SLVQAGADLLVVGSS 199
+ A D+ ++G S
Sbjct: 186 RIDAADPDIYIIGRS 200
>gi|145546653|ref|XP_001459009.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426832|emb|CAK91612.1| unnamed protein product [Paramecium tetraurelia]
Length = 199
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSL--RSYSDSVFDCHLMISSIDSHINIIADAGCD 87
G +H DVMDG FVPN++FG +I+ L R + + D H MI I +++AG
Sbjct: 2 GVDWLHLDVMDGHFVPNLTFGPPIIKCLTQRLQNRTFIDLHCMIQEPRKWIKDLSNAGGH 61
Query: 88 IITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETPV-AILEDVIDE--IDMILIMTVNP 143
+T H ES +I + I G + +A+ P+T + L ++ D+ DMILIMTV P
Sbjct: 62 QMTVHYESDIGNIEELSQMIRNAGMRPALALKPKTLIDHTLIEIFDKQLFDMILIMTVEP 121
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GFGGQ+ + +PK+ Q + K I +++DGGV N+ S +AGA+++V GS N
Sbjct: 122 GFGGQKFMADMLPKVTQLRQRYPK--IDIQLDGGVNCDNVISCYEAGANVIVSGSGIVNA 179
Query: 204 KG---EISYAKR 212
K I+Y K
Sbjct: 180 KDPQQSINYMKE 191
>gi|225387364|ref|ZP_03757128.1| hypothetical protein CLOSTASPAR_01117 [Clostridium asparagiforme
DSM 15981]
gi|225046496|gb|EEG56742.1| hypothetical protein CLOSTASPAR_01117 [Clostridium asparagiforme
DSM 15981]
Length = 144
Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVFDCH 68
S++ F + E++ + GAK H D+MDG +VPN+ +IR L+ +Y V D H
Sbjct: 6 SVINVPFLEMREQLDELAAGGAKFFHIDLMDGHYVPNLCMPIKLIRELKDAYPQIVMDVH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
+M+++ +I + +AG D + FH +S+P +RR + IH G K G+ INP + +E
Sbjct: 66 IMVTNPQDYIERLREAGADYVAFHTDSTPFVRRIINEIHGAGMKAGIVINPSQRIDHIEP 125
Query: 129 VIDEIDMILIMTVNPGFGG 147
I+ +DM+++M V PGF G
Sbjct: 126 YIEYVDMVMLMAVEPGFAG 144
>gi|238853611|ref|ZP_04643980.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 202-4]
gi|238833755|gb|EEQ26023.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 202-4]
Length = 219
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 109/214 (50%), Gaps = 6/214 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I S+ + L + + + A A +H DVMDG FVP I FGA + + YS+
Sbjct: 2 VKIAVSLHSGPKLHLSKTLDLLKSAKADYLHIDVMDGSFVPEIDFGASLTHEIAQYSNIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+++ I + I H E++ I R L I + KK V+INP TP+
Sbjct: 62 LDIHMMVNNPIRLIKHYDFPTTNSIGIHVEATQQIHRDLYFIKQLNKKAEVSINPGTPIT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQ-LIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
L ++D +D I++M+V+PG G+ I +I++ L + +EVDGG+T +
Sbjct: 122 ALYPILDLVDQIMVMSVDPGCSGKSPFISEVSTRIKELNQLRIDNDYNYQIEVDGGITEQ 181
Query: 182 NIKSLVQAGADLLVVGSSFF---NQKGEISYAKR 212
N+ L+ G D V GS F N KG+I K
Sbjct: 182 NLSPLIDDGLDTAVSGSFVFQGNNIKGQIQKLKN 215
>gi|329765821|ref|ZP_08257387.1| ribulose-phosphate 3-epimerase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137664|gb|EGG41934.1| ribulose-phosphate 3-epimerase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 555
Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+A D + L E+ A IH DVMDG FV +F I+ LR + FD
Sbjct: 293 IAPSIIAGDMNNLENEVKRCVAGRADYIHLDVMDGQFVQTKTFDHRKIKELRPLTVIPFD 352
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK----TGVAINPETP 122
HLMI+ H+ DAG DIIT H E S IH + K+ G+AINP+T
Sbjct: 353 THLMINEPVKHVREYVDAGSDIITIHAEVCN--ESSFGEIHDLLKQHQVGVGLAINPDTE 410
Query: 123 VAILE-DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ + +D +++M+V PG GQ+ IE T K+ + L+ ++ S +E DGGVT
Sbjct: 411 LPEWSYRFLPSLDQLIVMSVVPGKSGQKYIEETHGKMTKLNTLLREQKFSGCIEADGGVT 470
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK 204
NI S GA V GS+ ++
Sbjct: 471 FDNIGSCFLDGARAFVGGSAIIGKQ 495
>gi|255027025|ref|ZP_05299011.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-003]
Length = 141
Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT 140
A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +L+ V++E+DM+L MT
Sbjct: 1 FAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDVLQHVLNELDMVLFMT 60
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
VNPGFGGQ+ I + KI K ++ ++ I +EVDGGV K AGA++ V GS
Sbjct: 61 VNPGFGGQKFIPEVLEKISAFKEIVDEKGLDIEIEVDGGVDHETAKLCRDAGANVFVAGS 120
Query: 199 SFFNQK 204
+ K
Sbjct: 121 YIYGNK 126
>gi|298709591|emb|CBJ31417.1| Putative fusion of putative sugar/xylulosekinase and
ribulose-phosphate epimerase [Ectocarpus siliculosus]
Length = 475
Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 12/209 (5%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF-DCH 68
SILAAD + L E+ + AGA IH DV+D F ++FG V+ SLR SVF D H
Sbjct: 234 SILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVLTFGPPVVASLRRRHPSVFLDVH 293
Query: 69 LMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRT-IHAMGKKTGVAINPETPV 123
L + + +++ + DAG + FHPE+ S SL I G + GVA+ PETPV
Sbjct: 294 LAVENPHEYVDALKDAGTSQVLFHPEAVVEGSDMDAASLAVRISEAGMRAGVALRPETPV 353
Query: 124 AILEDVIDE---IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ + +++ + + ++ V PGFGGQ + + K+ + +++ + + ++VDGGV +
Sbjct: 354 SAVLPLLEPRRLVQCVDVLAVQPGFGGQAFDSTVLAKVEELRSICPE--LDIQVDGGVNA 411
Query: 181 RNIKSLVQAGADLLVVGSSFF-NQKGEIS 208
++ V AGA++L GS F N G ++
Sbjct: 412 ATAQACVAAGANVLTSGSFIFGNNTGAVA 440
>gi|73748478|ref|YP_307717.1| putative ribulose-phosphate 3-epimerase [Dehalococcoides sp. CBDB1]
gi|289432526|ref|YP_003462399.1| ribulose-phosphate 3-epimerase [Dehalococcoides sp. GT]
gi|73660194|emb|CAI82801.1| putative ribulose-phosphate 3-epimerase [Dehalococcoides sp. CBDB1]
gi|288946246|gb|ADC73943.1| Ribulose-phosphate 3-epimerase [Dehalococcoides sp. GT]
Length = 220
Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 113/217 (52%), Gaps = 7/217 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVI-RSLRSYSDS 63
+++VP+IL D + E + ++ A D+MDG FVP++S +V+ R S++
Sbjct: 4 VKVVPAILTDDPAAF-ESMIKQSEGFAPVAQIDIMDGQFVPSLSIPPEVLGRYKPSFASE 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM + + ++ G + FH E++P + I MG K G+A+NPET V
Sbjct: 63 I---HLMTLNPEEYLTYCKQHGARRVIFHFEATPRPEYVISRIKEMGFKVGLAVNPETSV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
A ++ ++DM+L M+V PGF G I + K+++ K + I L DGG NI
Sbjct: 120 AEFAHLVPQVDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGL--DGGAKQSNI 177
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V AG + + VGS+ F Q S L+ L K++
Sbjct: 178 PEIVAAGVNDICVGSAIFRQSDPQSSYLYLDKLAKNS 214
>gi|239624796|ref|ZP_04667827.1| ribulose-5-phosphate 3-epimerase [Clostridiales bacterium
1_7_47_FAA]
gi|239521182|gb|EEQ61048.1| ribulose-5-phosphate 3-epimerase [Clostridiales bacterium
1_7_47FAA]
Length = 226
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 9/207 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS--- 63
+ PSIL + EE+ + H D+MDG FVPN + +R +D
Sbjct: 8 LCPSILNLAIDNIREEVEKLDATDMDIYHVDLMDGTFVPNFGMSVRELEMIRRVTDQGAH 67
Query: 64 -VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ DCH+M+ + ++I +A AG DII HPES +L I GKKTG+ +NP T
Sbjct: 68 KLIDCHMMVMNPHNYIEKVAQAGADIIYIHPESELIPSATLELIQMQGKKTGLILNPCTT 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ ++D++ D ++IM VNPGF G++ + T K + + + + L +DGG T
Sbjct: 128 LESVKDMLPITDYVMIMAVNPGFAGREFMPYTRQKFIELNSYREEHGLGYHLLLDGGATR 187
Query: 181 RNIKSLVQ-AGADLLVVGSS--FFNQK 204
I L G + V+G FF ++
Sbjct: 188 EVISDLYHNCGVEGFVLGKQELFFQEE 214
>gi|302414012|ref|XP_003004838.1| ribulose-phosphate 3-epimerase [Verticillium albo-atrum VaMs.102]
gi|261355907|gb|EEY18335.1| ribulose-phosphate 3-epimerase [Verticillium albo-atrum VaMs.102]
Length = 214
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 54/226 (23%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSILAADF+ LG + V + +
Sbjct: 1 MAPKAIIAPSILAADFADLGHD-----------------------------HVQQPTEKF 31
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFH-----------PESSPHIRRS----LRT 105
+ FDCH+MI+ + +AGCD+ FH PE++ + S ++
Sbjct: 32 AKGTFDCHMMIAEPKKWVKEFKNAGCDLYCFHYEAAHSSDAESPETTSDNKTSPKALIKY 91
Query: 106 IHAMGKKTGVAINPETPVAILEDVID------EIDMILIMTVNPGFGGQQLIESTIPKIR 159
IH G G+A+ P T V +L ++++ DM+LIMTV PGFGGQ+ + S +PK++
Sbjct: 92 IHQQGMLAGIALKPATSVDVLWEILENPNQDERPDMVLIMTVEPGFGGQKFMASELPKVQ 151
Query: 160 QAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
AL K +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 152 ---ALREKYPDLNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAK 194
>gi|147669259|ref|YP_001214077.1| ribulose-phosphate 3-epimerase [Dehalococcoides sp. BAV1]
gi|146270207|gb|ABQ17199.1| Ribulose-phosphate 3-epimerase [Dehalococcoides sp. BAV1]
Length = 220
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++VP+IL D + E + ++ A D+MDG FVP++S +V+ + S
Sbjct: 4 VKVVPAILTDDPAAF-ESMIKQSEGFAPVAQIDIMDGQFVPSLSIPPEVLGRYKPCFAS- 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + + ++ G + FH E++P + I MG K G+A+NPET VA
Sbjct: 62 -EIHLMTLNPEEYLTYCKQHGARRVIFHFEATPRPEYVISRIKEMGFKVGLAVNPETSVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++ ++DM+L M+V PGF G I + K+++ K + I L DGG NI
Sbjct: 121 EFAYLVPQVDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGL--DGGAKQANIP 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V AG + + VGS+ F Q S L+ L K++
Sbjct: 179 EIVAAGVNDICVGSAIFRQSDPQSSYLYLDKLAKNS 214
>gi|269115265|ref|YP_003303028.1| ribulose-phosphate 3-epimerase [Mycoplasma hominis]
gi|268322890|emb|CAX37625.1| Ribulose-phosphate 3-epimerase [Mycoplasma hominis ATCC 23114]
Length = 215
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 10/200 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSV 64
+I S+L + ++L I + G +H+DVMDG FV N + I+ ++ +
Sbjct: 3 KISSSVLDVEKNKLTNYIDQLVDWGVCNVHYDVMDGIFVNNTALTFQEIKQVKENCKKHT 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + + + + G DI+TFH E+ + + + ++ + G+AI P T
Sbjct: 63 MDIHLMVKDVFKYYEMYKNIG-DILTFHYEAFENSDLEKMIKQCQKDNVRLGLAIKPNTQ 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ----AKALIGKRSISLEVDGGV 178
V + + ++LIM+V PGFGGQ+ IE++ KI++ KAL + +EVDGGV
Sbjct: 122 VEEIRQYLKHCSLVLIMSVEPGFGGQKFIENSFNKIKELADIRKAL--DLNFIIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGS 198
+NI + G +L VVGS
Sbjct: 180 KDQNIAKCFECGVNLAVVGS 199
>gi|323304444|gb|EGA58215.1| Rpe1p [Saccharomyces cerevisiae FostersB]
Length = 214
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 13/152 (8%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-------- 58
I PSILA+DF+ LG E + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 6 IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGD 65
Query: 59 -----SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ FDCH+M+ + + + A G D TFH E++ ++ I + G K
Sbjct: 66 ASNTEKKPTAFFDCHMMVENPEKWXDDFAKCGADQFTFHYEATQDPLHLVKLIKSKGIKA 125
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
AI P T V +L ++ +DM L+MTV PGF
Sbjct: 126 ACAIKPGTSVDVLFELAPHLDMALVMTVEPGF 157
>gi|269839038|ref|YP_003323730.1| ribulose-phosphate 3-epimerase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790768|gb|ACZ42908.1| Ribulose-phosphate 3-epimerase [Thermobaculum terrenum ATCC
BAA-798]
Length = 229
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +++ ++ AD SRLGEE++ + AG +H DV DG VP++ F I LR
Sbjct: 1 MTSGVRLGAALFNADHSRLGEELARVEAAGLDFVHLDVFDGRLVPDLGFPPRTIEHLRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ F+ HL + ++ DAG D++ H ES + ++ ++ G + G+
Sbjct: 61 TRLPFEVHLAAEEPLRFLPVLRDAGVDLLLLHVESVRLLYEAVFSVRDAGLRVGLVFGLG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFG--GQQLIESTIPKIRQAKALI--GKRSISLEVDG 176
TP+ +L V +D +L++ G G G IP++R+A+ LI + + L+V G
Sbjct: 121 TPLELLPPVAGMLDAVLLLARVTGEGTRGASFNPMVIPRVRRARELIDQAEAGVDLQVAG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFN 202
GV +++ LV AGA L +G +
Sbjct: 181 GVRREHVRDLVAAGATSLALGGGIYR 206
>gi|145352180|ref|XP_001420433.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580667|gb|ABO98726.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 204
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSY---SDSVFDCHLMISSIDSHINIIADAGC 86
GA +H D+MDG FVPN++ G V+ L D+ FDCHL +S+ + + +A AG
Sbjct: 5 GADWLHVDIMDGHFVPNLTIGPPVVADLAKRVGPRDAFFDCHLSVSNPATLVPALAAAGA 64
Query: 87 DIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPV---AILEDVIDE--IDMILIM 139
+TFH E S +TI ++G + VA P TP + +++D +DM+L +
Sbjct: 65 SSVTFHIEVVSGTAAEELCKTIRSLGMRAAVACKPSTPCDEDGGVYELVDAGLVDMVLCL 124
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+V PGFGGQ+ + K+ +A + +++DGGV + +AGA++LV GS+
Sbjct: 125 SVEPGFGGQKFNPAVCDKVSALRARY--PDLDIQMDGGVNPSTAELCARAGANVLVAGSA 182
Query: 200 FFNQKGEISYAKRLNDLKKSAL 221
F G + A+ ++ L++S L
Sbjct: 183 VF---GAANPAQVISQLRQSIL 201
>gi|50365455|ref|YP_053880.1| pentose-5-phosphate-3-epimerase [Mesoplasma florum L1]
gi|50364011|gb|AAT75996.1| pentose-5-phosphate-3-epimerase [Mesoplasma florum L1]
Length = 227
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 8/201 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSV 64
++ SI +F +G++I + +AG + IH D+MDG FV N + + ++ Y
Sbjct: 5 KVAVSIYVFNFLEIGKKIDELIEAGMEWIHVDIMDGNFVNNYALCQKFCKDIKDKYPKIK 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES----SP-HIRRSLRTIHAMGKKTGVAINP 119
D H+M S+ + +I A+AGCD FH E+ +P + + I + K +A+NP
Sbjct: 65 VDAHMMCSNSEKYIESFAEAGCDYFIFHYETLTDKNPITVNNIINKIKSYNMKPIIALNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR--QAKALIGKRSISLEVDGG 177
ET ++ D++ ++ M + PGF GQ++IES+ KI + + DGG
Sbjct: 125 ETSFEHIKTYCDDLYAVMCMNILPGFNGQKIIESSYSKINIINKYRKENNKVFKIMTDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGS 198
+ K ++ AGAD++VVG+
Sbjct: 185 LREDTYKEILDAGADIVVVGA 205
>gi|262037591|ref|ZP_06011046.1| D-allulose-6-phosphate 3-epimerase [Leptotrichia goodfellowii
F0264]
gi|261748389|gb|EEY35773.1| D-allulose-6-phosphate 3-epimerase [Leptotrichia goodfellowii
F0264]
Length = 226
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 5/210 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PS++ D ++ E++ +I A H D+MDG FV NI+ + L +
Sbjct: 4 MKFSPSLMCMDLTKFKEQV-DILNERADFYHVDIMDGHFVKNITLSPFFVEQLNKITKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +I+ +A +G I H E+ + R + I ++G K GV +NP TPV
Sbjct: 63 IDVHLMVEFPGDYIDELAKSGATYICPHAETINKDAFRIINKIKSLGCKAGVVLNPSTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++ I +D I IMTV+PGF GQ I + KI++ K + + + S +E+DG R
Sbjct: 123 EWIKYYIHLVDKITIMTVDPGFAGQPFIPEMLEKIKELKKIKEENNYSYLIEIDGSCNER 182
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYA 210
K L AGA++L+VGSS FN + ++ A
Sbjct: 183 TFKRLTSAGAEVLIVGSSGLFNLEEDLVVA 212
>gi|89895758|ref|YP_519245.1| hypothetical protein DSY3012 [Desulfitobacterium hafniense Y51]
gi|89335206|dbj|BAE84801.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 218
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S++ A++ L EI ++ AG H D+MDG FV N + G ++ + + +CHL
Sbjct: 9 SMMCANYGHLETEIRSLETAGIDSFHVDIMDGHFVHNFAMGLYELKYICRTAKKNVECHL 68
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
MI+ ++I+ ADAG D++ HPES ++ I G G+AINP T V + ++
Sbjct: 69 MITDPYNYIDTFADAGVDVVYIHPESEYQPSATIEKIQNAGMIPGIAINPGTSVETITEL 128
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+ + +L+M VNPG GQ + KI + + + + DG + NI+
Sbjct: 129 LKIVGRVLVMCVNPGNAGQIYLPFVHDKICKLLDMQKEYGFEVYWDGHGSVENIRKYAPL 188
Query: 190 GADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G V+GS+ KG Y + L++L+
Sbjct: 189 GVRGFVLGSATLFGKGR-GYGEILSELRNG 217
>gi|255029854|ref|ZP_05301805.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes LO28]
Length = 116
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 72/114 (63%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFATLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNP 116
>gi|332295281|ref|YP_004437204.1| Ribulose-phosphate 3-epimerase [Thermodesulfobium narugense DSM
14796]
gi|332178384|gb|AEE14073.1| Ribulose-phosphate 3-epimerase [Thermodesulfobium narugense DSM
14796]
Length = 208
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SIL+ADF I + + A H DVMDG +VPNISFG L S HL
Sbjct: 6 SILSADFLNFERNIREL-EPYADAWHVDVMDGHYVPNISFGPQFAAYLAKCSKLPVSVHL 64
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ + ++++ ++ TFH E++ R + M G++I P + + +V
Sbjct: 65 MVKEPEKFVSLVPKTVREV-TFHQEATVAPVRFCAMLREMNFLPGISIGPGVHESSILEV 123
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+ + +L M+V PGFGGQ IE KI++ L R+ + VDGGV + L +
Sbjct: 124 LPFVHHVLFMSVEPGFGGQSFIEPVFEKIKRLVKLCPDRNFEIWVDGGVDMFWGEKLKEI 183
Query: 190 GADLLVVGSSFFNQKGEISYAK 211
G DL+V+GS+FF K + K
Sbjct: 184 GTDLVVMGSAFFKAKDPGEFGK 205
>gi|72549079|ref|XP_843473.1| ribulose-phosphate 3-epimerase [Leishmania major strain Friedlin]
gi|323363990|emb|CBZ12996.1| putative ribulose-phosphate 3-epimerase [Leishmania major strain
Friedlin]
Length = 253
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 113/215 (52%), Gaps = 11/215 (5%)
Query: 7 IVPSILAADFSRLGEEISNIT--KAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PS++ AD ++L +E ++ K G A +H D++DG PN SF + LR + +
Sbjct: 27 ISPSLMVADQTKLLQESLDVLSDKGGSADWLHVDIVDGHLAPNFSFCPATVSDLRKHLPN 86
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F DCHL++ + ++ A AG FH E++ + R + G G+A+ P TP
Sbjct: 87 TFLDCHLVVCNPIRWVDSFAKAGASTFVFHYEATENPVAVCRKVREAGMVAGIALAPNTP 146
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+L +ID E+DM L+M V GF GQQ T+ K+R+ + + ++VDG +T
Sbjct: 147 AEVLFPIIDAGEVDMALVMCVPIGFAGQQFQMETVEKVRRMRQRYPH--LLIQVDGSITL 204
Query: 181 RNIKSLVQAGADLLVVGSSFF---NQKGEISYAKR 212
I + AGA+ +V G + F ++KG + +R
Sbjct: 205 DTIDLVAAAGANAIVPGRAAFKSNDRKGSMEGLRR 239
>gi|113205378|gb|AAU93593.2| Ribulose-phosphate 3-epimerase, cytoplasmic isoform, putative
[Solanum demissum]
Length = 273
Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 20/168 (11%)
Query: 38 VMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
+ DG FVPN++ GA +I SLR ++ + DCHLM+++ ++ + AG TFH E+S
Sbjct: 99 LQDGHFVPNLTLGAPIIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEASR 158
Query: 98 HIRRSL-RTIHAMGKKTGVAINPETPVAILEDVID---EIDMILIMTVNPGFGGQQLIES 153
+ L + I + G K GV++ P TP+ + ++D ++++L+MTV PGFGGQ+ +
Sbjct: 159 DNWQELVQKIKSKGMKPGVSLKPGTPIEEVYPLLDGENSVELVLVMTVEPGFGGQKFMPE 218
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ K VDGG+ I++ AGA+ +V GSS F
Sbjct: 219 MMDK----------------VDGGLGPSTIEAATSAGANCIVAGSSVF 250
>gi|57234554|ref|YP_181418.1| ribulose-phosphate 3-epimerase, putative [Dehalococcoides
ethenogenes 195]
gi|57234619|ref|YP_181384.1| ribulose-phosphate 3-epimerase, putative [Dehalococcoides
ethenogenes 195]
gi|57225002|gb|AAW40059.1| ribulose-phosphate 3-epimerase, putative [Dehalococcoides
ethenogenes 195]
gi|57225067|gb|AAW40124.1| ribulose-phosphate 3-epimerase, putative [Dehalococcoides
ethenogenes 195]
Length = 220
Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++IVP++L D + E + N ++ A D+MDG FVP++S +V+ + S
Sbjct: 4 VKIVPAVLTDDPAAF-ECMLNQLESFAPSAQIDIMDGQFVPSLSIPPEVLGRYKPRFAS- 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + + ++ G + FH E++ + I +G + G+A+NPETPV+
Sbjct: 62 -EIHLMTLNPEEYLTYCKQHGAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPETPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++ ++DM+L M+V PGF G I + K+++ K + I L DGG NI
Sbjct: 121 DFAYLVPQLDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGL--DGGAKEGNIP 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V AG + + VGS+ F Q S L+ L K+A
Sbjct: 179 EIVAAGVNDICVGSAIFRQTDPKSSYLYLDKLAKNA 214
>gi|160937620|ref|ZP_02084981.1| hypothetical protein CLOBOL_02511 [Clostridium bolteae ATCC
BAA-613]
gi|158439689|gb|EDP17439.1| hypothetical protein CLOBOL_02511 [Clostridium bolteae ATCC
BAA-613]
Length = 222
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 3/212 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PSI +A L ++ I IH DV DG F+PNI+FG ++ + +YS +
Sbjct: 1 MKIIPSIASASQLDLKCQLDRIRDV--PYIHIDVEDGNFLPNITFGMKTVKEMAAYSKAE 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HL+ ++ +I ++ +G + H E+ P+ L + G K G+A+N P+
Sbjct: 59 LDVHLLTTNPIKYIQELSKSGISAVCGHMEALPYPLEFLHEVRQAGMKAGLALNLSMPIE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ID D +L+MT P GQ+ + +IR+A+A I + + DGG+ +
Sbjct: 119 QVMSYIDSFDYLLLMTSEPDGCGQRFRSCALERIRRARACI-PDEVMIYADGGIGRDELG 177
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGAD +V+G + + + K + L
Sbjct: 178 KVAEAGADCVVMGRAVWGAEDPAKAWKEMETL 209
>gi|270308001|ref|YP_003330059.1| ribulose-phosphate 3-epimerase-like protein [Dehalococcoides sp.
VS]
gi|270153893|gb|ACZ61731.1| ribulose-phosphate 3-epimerase-like protein [Dehalococcoides sp.
VS]
Length = 220
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++VP+IL D + E + ++ A D+MDG FVP++S +V+ + S
Sbjct: 4 VKVVPAILTDDPAAF-EMMIKQSEGFAPSAQIDIMDGQFVPSLSIPPEVLVRYKPRFAS- 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + + ++ G + FH E++ + I +G + G+A+NPETPV+
Sbjct: 62 -EIHLMTINPEEYLIYCKRHGAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPETPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++ ++DM+L M+V PGF G I + + K+++ K + I L DGG NI
Sbjct: 121 DFAYLVPQLDMVLFMSVIPGFYGAPFIPAVLLKVKEFKLRFPETEIGL--DGGAKEGNIA 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V AG + + VGS+ F Q S + L++L K+A
Sbjct: 179 EIVAAGVNDICVGSAIFRQTDPKSSYRYLDELAKNA 214
>gi|189219849|ref|YP_001940490.1| Pentose-5-phosphate-3-epimerase [Methylacidiphilum infernorum V4]
gi|189186707|gb|ACD83892.1| Pentose-5-phosphate-3-epimerase [Methylacidiphilum infernorum V4]
Length = 225
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 19 LGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHI 78
L +EI IH DV DG FVPN+S G D I +LRS ++ + HL+I D
Sbjct: 18 LSKEIKKAEIFNCDSIHVDVTDGHFVPNLSIGPDFIAALRSMTNLPIEVHLLIQQPDRFA 77
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
++G D++ H E+ +++++ IH+MG + G+A+NP T + + ++ +LI
Sbjct: 78 RDFVESGADLLIVHMEAHHDVKKTINLIHSMGCRCGLALNPLTVFEKSINYLSQLQALLI 137
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNIKSLVQAGADLLVV 196
+ N + KIR+A+ K +++ + V+GG++++ I S V AGA+ L++
Sbjct: 138 LITNFPSKSHPFQPDKLSKIRKAREFREKNNLNFQILVEGGLSAQTIPSTVIAGANTLIL 197
Query: 197 GSSFFNQ 203
SSFF +
Sbjct: 198 ESSFFKE 204
>gi|326623276|gb|EGE29621.1| protein SgcE [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 214
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y
Sbjct: 1 MEVSMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPT 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q++ + DGG+T
Sbjct: 121 TPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
R + L AGA LV+G + F
Sbjct: 179 RAARLLTAAGAQHLVIGRALFT 200
>gi|269122712|ref|YP_003310889.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268616590|gb|ACZ10958.1| Ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 220
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 10/219 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q SI+ AD L +E+ + KA K +H DVMDG FV N++ G ++ ++ +D
Sbjct: 3 QFAASIMCADQMNLKKELEELEKAEIKLLHCDVMDGIFVDNMAMGPYILEEIKKNTDIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + ++ + + I+FH E+S + + + + G +AI+P+TP++
Sbjct: 63 DIHLAAITPLKYMKMYSAIKPKYISFHIETSENPEKEIEFLRENGISPSLAISPQTPISE 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVTSR 181
+ + +DM+LIMTVNPGF GQ S I K+++ I R + +EVDG +
Sbjct: 123 IVKYLSLVDMLLIMTVNPGFAGQPFNYSVIEKLKELN--ICLRDLENPPLIEVDGNINKN 180
Query: 182 NIKSLVQAGADLLVVGSS--FFNQKGEISYAKRLNDLKK 218
I L + A + V+G+S F N G +Y +++ D+KK
Sbjct: 181 TIPILYKNNASVYVLGTSALFNNTPG--TYREKIEDMKK 217
>gi|255019027|ref|ZP_05291153.1| hypothetical protein LmonF_17081 [Listeria monocytogenes FSL
F2-515]
Length = 120
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 72/116 (62%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTP 119
>gi|150007987|ref|YP_001302730.1| ribulose-phosphate 3-epimerase [Parabacteroides distasonis ATCC
8503]
gi|149936411|gb|ABR43108.1| ribulose-phosphate 3-epimerase [Parabacteroides distasonis ATCC
8503]
Length = 223
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 3/201 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S++ AD L +I + + G +H D+MD FVPN++FG DV+ S+R + D HL
Sbjct: 10 SLMCADLVNLERDIHILEENGVDYLHVDIMDAAFVPNLTFGPDVVNSIRKITGLPVDIHL 69
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
++ + I + DI++ H E + + I G K G+A+NP+T + +
Sbjct: 70 LMEHPRTIIRSMDIRDGDIVSIHSECKESVLENAAFIKQRGAKFGLALNPDTSIDEVRKY 129
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVTSRNIKSL 186
+ +D+IL+M + PGF G +I + K+ + + + + ++ + VDG V++ K +
Sbjct: 130 LPYVDVILLMLIVPGFAGTMMIHGMMEKVGETRQYLDQHNYGNVEICVDGSVSTERAKYM 189
Query: 187 VQAGADLLVVGSSFFNQKGEI 207
Q GA + V G++ ++G I
Sbjct: 190 RQLGASIFVGGTAGIFKQGCI 210
>gi|198243651|ref|YP_002215530.1| epimerase [Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|197938167|gb|ACH75500.1| protein SgcE [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
Length = 210
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y+ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPTTPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITLRAARLLTA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|167770950|ref|ZP_02443003.1| hypothetical protein ANACOL_02304 [Anaerotruncus colihominis DSM
17241]
gi|167666990|gb|EDS11120.1| hypothetical protein ANACOL_02304 [Anaerotruncus colihominis DSM
17241]
Length = 217
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS+ +AD L I + A +H D+ DG FVPNI+FG +R++ Y+
Sbjct: 2 ILIEPSLASADQLNLQTHIDTLKNA--PSLHLDIEDGNFVPNITFGLKTVRAVARYAKQR 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+S ++++ + G I H E+ + L+ I G + G+A N P+
Sbjct: 60 LDAHLMVSQPENYVLDLLQMGVHSIAIHIEAGQYPAVQLQAIRKGGGRAGLAFNCMAPIE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ID +LIMT P GQ+ E + KI +A+ L G + + DGG+ +
Sbjct: 120 AGLAYREWIDYLLIMTSEPDGMGQRFNEHILQKISRARTLYGP-EMEIMADGGIGEEQMA 178
Query: 185 SLVQAGADLLVVGSSFFN 202
++ GA+++V+G + +N
Sbjct: 179 AVAACGANVIVMGRTIWN 196
>gi|313610542|gb|EFR85670.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL F2-208]
Length = 111
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
G + GV +NP TP + LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R
Sbjct: 2 GVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRP 61
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +EVDGGV + K AGADL+VVGS F +G+I L L K L
Sbjct: 62 IQIEVDGGVNAELAKECTLAGADLIVVGSYLF--EGDIE--ANLEKLSKGVL 109
>gi|146101688|ref|XP_001469176.1| ribulose-phosphate 3-epimerase [Leishmania infantum]
gi|134073545|emb|CAM72278.1| putative ribulose-phosphate 3-epimerase [Leishmania infantum JPCM5]
Length = 253
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 8/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNIT--KAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PS++ AD ++L +E ++ K G A +H D++DG PN SF + LR + +
Sbjct: 27 ISPSLMVADQTKLLQESLDVLSDKGGSADWLHVDIVDGHLAPNFSFSPATVSDLRMHLPN 86
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F DCHL++ ++ A AG FH E++ + R + G G+A+ P TP
Sbjct: 87 TFLDCHLIVRDPIRWVDSFAKAGASTFVFHYEATENPVAVCRKVREAGMVAGIALAPNTP 146
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+L +ID E+DM L+M V G GQ+ T+ K+RQ + + ++VDG +T
Sbjct: 147 AEVLFPIIDAGEVDMALVMCVQIGLAGQRFQIETVEKVRQLRQRYPH--LLIQVDGSITL 204
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + AGA+ +V G + F +RL
Sbjct: 205 DTIDLVAAAGANAIVPGRAAFKSNDRKGSMERL 237
>gi|56413440|ref|YP_150515.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197362363|ref|YP_002142000.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|56127697|gb|AAV77203.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197093840|emb|CAR59323.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 210
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
GA LV+G + F
Sbjct: 183 VGAQHLVIGRALFT 196
>gi|291518325|emb|CBK73546.1| ribulose-5-phosphate 3-epimerase [Butyrivibrio fibrisolvens 16/4]
Length = 220
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 3/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ S++ AD+ L E++ + + G H D+MDG FVPN + + +R + S +
Sbjct: 2 EFELNASMMCADYGHLSREVNELEEGGIDSFHIDIMDGRFVPNFAMSLNDMRYIASVTFK 61
Query: 64 VFDCHLMISSIDSHINIIAD--AGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ + I + D + HPE+ H +L+ + G G+AINP T
Sbjct: 62 PLDVHLMVEHPSNTIELFLSNLRKGDTVYIHPEAEYHPSTTLQKVIDAGMIPGIAINPGT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +++++ +D +L+M+VNPG GQ + KI + L + + DG +
Sbjct: 122 SIETVKEMLKIVDKVLVMSVNPGNAGQMYLPYVGEKIEKLLKLKERYGFKIYWDGACSGN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I G D ++G++ +G +Y L D++ L
Sbjct: 182 KILEYAPKGVDGFILGTTLLFGRGR-TYKDILEDVRNLRL 220
>gi|322503189|emb|CBZ38273.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 253
Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 8/213 (3%)
Query: 7 IVPSILAADFSRLGEEISNIT--KAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PS++ AD ++L +E ++ K G A +H D++DG PN SF + LR + +
Sbjct: 27 ISPSLMVADQTKLLQESLDVLSDKGGSADWLHVDIVDGHLAPNFSFSPATVSDLRMHLPN 86
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F DCHL++ ++ A AG FH E++ + R + G G+A+ P TP
Sbjct: 87 TFLDCHLIVRDPIRWVDSFAKAGTSTFVFHYEATENPVAVCRKVREAGMVAGIALAPNTP 146
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+L +ID E+DM L+M V G GQ+ T+ K+RQ + + ++VDG +T
Sbjct: 147 AEVLFPIIDAGEVDMALVMCVQIGLAGQRFQIETVEKVRQLRQRYPH--LLIQVDGSITL 204
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + AGA+ +V G + F +RL
Sbjct: 205 DTIDLVAAAGANAIVPGRAAFKSNDRKGSMERL 237
>gi|19074354|ref|NP_585860.1| D-RIBULOSE 5 PHOSPHATE 3 EPIMERASE [Encephalitozoon cuniculi GB-M1]
gi|51701892|sp|Q8SRP6|RPE_ENCCU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|19068996|emb|CAD25464.1| D-RIBULOSE 5 PHOSPHATE 3 EPIMERASE [Encephalitozoon cuniculi GB-M1]
Length = 217
Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SIL +F L EE+ + + G IH DVMD FV NI+FG +I + + D VFD H+
Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILEH-DFVFDVHM 71
Query: 70 MISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ S I I ++T H E + LR + + G+A+NPET V E
Sbjct: 72 MVESPLDIIMQIDLERVSLVTIHSEVCDKAGVAEYLRKRNVL---FGIALNPETQVDDAE 128
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+ D +LIM+V PGFGGQ+ E + K+ + + + + +DGG+ NI +
Sbjct: 129 --MRSADFVLIMSVKPGFGGQKFQEECLAKVEEVR----RYGKMVGIDGGIEMSNIGRI- 181
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLND 215
GAD VVGS +F + + + D
Sbjct: 182 -TGADYAVVGSGYFRSGDRKKFLRDITD 208
>gi|291320142|ref|YP_003515400.1| ribulose phosphate 3 epimerase [Mycoplasma agalactiae]
gi|290752471|emb|CBH40443.1| Ribulose phosphate 3 epimerase(Pentose 5 phosphate 3 epimerase)
[Mycoplasma agalactiae]
Length = 220
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 7/197 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
+ PS+L + + + G K IH+DVMDG FVPN++ D I+++ F
Sbjct: 8 VTPSLLNVEPENRLNMANVLVNEGIKWIHYDVMDGKFVPNLAIELDEIKNIHEKGLKHFK 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + +I++ D DI+TFH E+ S + + L+ H + G+AI P T V
Sbjct: 68 DAHLMVENPLDYIDLYKDV-VDIVTFHYEAVESAKLLKFLKQKHH-DYRLGIAIKPNTEV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++ + I ++L+M+V PG GGQ+ I S I KI+ K L K + ++VDGG+
Sbjct: 126 EEIKKFLPYIQLVLVMSVEPGKGGQKFIPSAIDKIKLLKQLRIKHAYDYLIQVDGGINDV 185
Query: 182 NIKSLVQAGADLLVVGS 198
+AGAD V G+
Sbjct: 186 TGPECFKAGADACVAGT 202
>gi|154345055|ref|XP_001568469.1| ribulose-phosphate 3-epimerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065806|emb|CAM43583.1| putative ribulose-phosphate 3-epimerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 253
Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 15/212 (7%)
Query: 7 IVPSILAADFSRLG-EEISNITKAG--AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PS++ AD ++L E + +++ G A IH D++DG F N SF + LR + +
Sbjct: 27 ISPSLMVADQTKLLLESLDVLSENGGSADWIHVDIVDGHFASNFSFCPATVSDLRKHLPN 86
Query: 64 VF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F DCH++IS+ ++ AG FH E++ R + G GVA+ P+TP
Sbjct: 87 TFLDCHMIISNPIRWVDTFVKAGASTFVFHYEATEDPVAVCRKVRKAGMVAGVALRPDTP 146
Query: 123 VAILEDVI--DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
L +I DE+DM+L+M V GF GQ T+ K+R L+ +R L +VDG +
Sbjct: 147 AERLFPLIDADEVDMVLVMCVQIGFAGQTFKPETVEKVR----LLRQRYPHLLIQVDGCI 202
Query: 179 TSRNIKSLVQAGADLLVVGSSFF---NQKGEI 207
T I + AGA+ +V G + F ++KG +
Sbjct: 203 TLETIDLVAAAGANAIVPGRAVFKSNDRKGSM 234
>gi|15829154|ref|NP_326514.1| ribulose-phosphate 3-epimerase [Mycoplasma pulmonis UAB CTIP]
gi|14090098|emb|CAC13856.1| RIBULOSE-PHOSPHATE 3-EPIMERASE (PENTOSE-5-PHOSPHATE 3-EPIMERASE)
(PPE) (R5P3E) [Mycoplasma pulmonis]
Length = 215
Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS-VF 65
I PS+L + + + + G K IH+DVMDG FVPN + + I +++ + +
Sbjct: 4 IAPSLLNLKKDQRLNIANELLENGIKWIHYDVMDGKFVPNHAIEIEEIIHIKTNAKKHIA 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT--GVAINPETPV 123
D HLM+ + + + D + +TFH E+ + I K G+++ PET +
Sbjct: 64 DAHLMVENPLYYFEKLWDK-VEYLTFHFEALKDENEIWKIIQKYKSKVKIGISLKPETKI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
L+ + +ID++LIM+V PG GGQ+ I+S++ KI K I K++++L +VDGG+ +
Sbjct: 123 EKLDPFLKDIDLVLIMSVEPGKGGQKFIDSSLEKIAYIKEKINKQNLNLVIQVDGGINNI 182
Query: 182 NIKSLVQAGADLLVVGS 198
K ++G D+LV G+
Sbjct: 183 TAKQAFKSGGDVLVAGT 199
>gi|148377480|ref|YP_001256356.1| ribulose-phosphate 3-epimerase [Mycoplasma agalactiae PG2]
gi|148291526|emb|CAL58912.1| Ribulose phosphate 3 epimerase(Pentose 5 phosphate 3 epimerase)
[Mycoplasma agalactiae PG2]
Length = 220
Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 7/197 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
+ PS+L + + + G K IH+DVMDG FVPN++ D I+++ F
Sbjct: 8 VTPSLLNVEPENRLNMANILVNEGIKWIHYDVMDGKFVPNLAIELDEIKNIHEKGLKHFK 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + +I++ D DI+TFH E+ S + + L+ H + G+AI P T V
Sbjct: 68 DAHLMVENPLDYIDLYKDV-VDIVTFHYEAVESEKLLKFLKQKHH-DYRLGIAIKPSTEV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++ + I ++L+M+V PG GGQ+ I S I KI+ K L K + ++VDGG+
Sbjct: 126 EEIKKFLPYIQLVLVMSVEPGKGGQKFIPSAIDKIKLLKQLRIKHAYDYLIQVDGGINDV 185
Query: 182 NIKSLVQAGADLLVVGS 198
+AGAD V G+
Sbjct: 186 TGPECFKAGADACVAGT 202
>gi|313631702|gb|EFR98923.1| ribulose-phosphate 3-epimerase family protein [Listeria seeligeri
FSL N1-067]
Length = 187
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 99/176 (56%), Gaps = 3/176 (1%)
Query: 41 GCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
G +V N++ G + + +R+ ++ D HL + +I++ + I+FH E + +
Sbjct: 1 GVYVNNLALGPEYLEIVRNNTEIPLDIHLATITPLKYIDMFGPVKPEYISFHVEVADDVT 60
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
+R I + K +AINPETP+ + +++++M+L+MTVNPGF GQ+ + K+R
Sbjct: 61 EVIRKIRSYNVKPSIAINPETPIEAIYPYLNDVEMVLMMTVNPGFAGQKFQTDVLQKLRD 120
Query: 161 AKA-LIGKRSISL-EVDGGVTSRNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
KA L GK + L EVDG + + + D+ V+G+S F+ + + SY++RL
Sbjct: 121 LKAKLAGKVHVPLIEVDGNINKETVGLMRDCLPDIYVLGTSALFHDRDKTSYSERL 176
>gi|218133533|ref|ZP_03462337.1| hypothetical protein BACPEC_01400 [Bacteroides pectinophilus ATCC
43243]
gi|217990908|gb|EEC56914.1| hypothetical protein BACPEC_01400 [Bacteroides pectinophilus ATCC
43243]
Length = 224
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ S++ AD+ L EI + G H D+MDG +VPN + + +R + +D
Sbjct: 2 QFELTASMMCADYGHLEREIRELEMGGIDSFHIDIMDGRYVPNFAMSLNDMRYIAGATDK 61
Query: 64 VFDCHLMISSIDSHINIIAD--AGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI ++HI + D + HPE+ H +L+TI G G+AINP T
Sbjct: 62 PLDVHLMIEHPNTHIGLFLKNLRRGDTVYIHPEAEYHPSTTLQTIIDAGMIPGIAINPGT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V + +++ + +L+M+VNPG GQ + KI + +L + DG +++
Sbjct: 122 SVETVFEMLRIVKKVLVMSVNPGNAGQMYLPYVGHKIDKLLSLKEDMDFEMYWDGACSAQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
I G V+G++ K
Sbjct: 182 RITEFAPKGMKGFVLGTTLLFGK 204
>gi|300708764|ref|XP_002996555.1| hypothetical protein NCER_100333 [Nosema ceranae BRL01]
gi|239605866|gb|EEQ82884.1| hypothetical protein NCER_100333 [Nosema ceranae BRL01]
Length = 210
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 24/220 (10%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SIL ++ + + ++ + +H D++D VPNISFG ++I + Y D +FD HL
Sbjct: 5 SILDSNLLNIEKSLTELKNNNINHLHLDILDTSLVPNISFGPNIINQILKY-DFIFDVHL 63
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM---GKKTGVAINPETPVAIL 126
M+ + + ++ DI+ H E I L + + KK G+ I+P V +
Sbjct: 64 MVKDPITILQLLDLEKIDIVFIHYE----INNMLHVVEFLVKNNKKIGLTISPNISVKTI 119
Query: 127 ----EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV---T 179
E ++ ++ ILIMTV PGFG Q+ I KI+ +I K+ S+ VDGG+ T
Sbjct: 120 FSLPERILQNVNTILIMTVYPGFGNQKFINECAEKIK----MIDKKRYSVAVDGGISINT 175
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
RN+K G D +V+GS++F + + + + ++ K
Sbjct: 176 IRNVK-----GYDKIVIGSAYFKAENKKVFLNEIEEILKK 210
>gi|225389348|ref|ZP_03759072.1| hypothetical protein CLOSTASPAR_03095 [Clostridium asparagiforme
DSM 15981]
gi|225044595|gb|EEG54841.1| hypothetical protein CLOSTASPAR_03095 [Clostridium asparagiforme
DSM 15981]
Length = 224
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ + L ++ + AG +H D+ DG FV ISFG D +R++ Y+D D
Sbjct: 9 VSPSILSGNLLNLERQLDAL--AGLGNLHLDIDDGNFVRGISFGMDTVRAIVDYTDIPTD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT-GVAINPETPVAI 125
HL + + ++ + G + H E+ P+ L G G+A+N +TPVA
Sbjct: 67 VHLEVLNPCDYVEELCRCGVKRLCAHIEALPYPSLFLSAARKGGAAACGLAVNLKTPVAE 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L D++D +L ++V G + K+R+A+AL+G + VDGGV + N+
Sbjct: 127 LVPYADQLDYVLFVSVEADHDGLPFRPGVLDKVREARALLGP-GTDIWVDGGVNAGNLGR 185
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V+AGA +VVG + F + + + L +L ++A
Sbjct: 186 IVRAGATGVVVGRAVFGAEDPVRAYRDLLELAEAA 220
>gi|26553759|ref|NP_757693.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma penetrans HF-2]
gi|26453766|dbj|BAC44097.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma penetrans HF-2]
Length = 216
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 9/212 (4%)
Query: 10 SILA---ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
S+LA D ++ E++ + K K IH+D+MD FVPN SF
Sbjct: 8 SVLALDQKDENKFKEQLESCLKNNIKDIHYDIMDNKFVPNTSFNNLEFLDYLIEKGCNVS 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK---KTGVAINPETPV 123
HLM+ ++ +++ + ITFH E+ I S+ I+ + K K G+AI P + +
Sbjct: 68 AHLMVENVAHYVDKLITKKVKYITFHCEAQT-IEESISIINTIKKHNIKAGIAIKPNSSL 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
E +I D I +M+V PGFGGQ+ IE++ +IR+ K L K I +E+DGG+ + I
Sbjct: 127 KEYESLIKISDKITVMSVEPGFGGQKYIENSEIRIREIKKLSHKNLI-VEIDGGINDQTI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
L + A V GS FN + K+L D
Sbjct: 186 -LLCKDDATHFVTGSFLFNNLEKFEELKKLLD 216
>gi|313636070|gb|EFS01959.1| ribulose-phosphate 3-epimerase family protein [Listeria seeligeri
FSL S4-171]
Length = 187
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 99/176 (56%), Gaps = 3/176 (1%)
Query: 41 GCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
G +V N++ G + + +R+ ++ D HL + +I++ + I+FH E + +
Sbjct: 1 GVYVNNLALGPEYLEIVRNNTEIPLDIHLATITPLKYIDMFGPVKPEYISFHVEVADDVT 60
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
+R I + K +AINPETP+ + +++++M+L+MTVNPGF GQ+ + K+R
Sbjct: 61 EVIRKIRSYNIKPSIAINPETPIEAIYPYLNDVEMVLMMTVNPGFAGQKFQTDVLQKLRD 120
Query: 161 AKA-LIGKRSISL-EVDGGVTSRNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
KA L GK + L EVDG + + + D+ V+G+S F+ + + SY++RL
Sbjct: 121 LKAKLAGKVHVPLIEVDGNINKETVGLMHDCLPDIYVLGTSALFHDRDKTSYSERL 176
>gi|46143477|ref|ZP_00135151.2| COG0036: Pentose-5-phosphate-3-epimerase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 114
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGE+++ + KAG IHFDVMD FVPN++FG + ++LR Y +
Sbjct: 8 IAPSILSADLARLGEDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRDYGITAEI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
D HLM+ ++ I A AG + ITFHPE++ HI R+L+ G K
Sbjct: 68 DVHLMVKPVERLIPDFAKAGANYITFHPEATDHIDRTLQMYRVSGCK 114
>gi|2462256|emb|CAA65631.1| pentose-5-phosphate 3-epimerase [Chlamydomonas reinhardtii]
Length = 143
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 85/137 (62%), Gaps = 8/137 (5%)
Query: 88 IITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
I + H E S H+ R+L + +G K GV +NP T ++ +E+V+D +D+ILIM+VNPGF
Sbjct: 2 IYSVHAEQSSTIHLHRTLNMVKDLGCKAGVVLNPGTSLSTIEEVLDVVDLILIMSVNPGF 61
Query: 146 GGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN-IKSLVQAGADLLVVGSSFFN 202
GGQ+ IES + KIR K + ++ ++ +EVDGGVT N K GA+ LV GS+ F
Sbjct: 62 GGQKFIESQVAKIRNLKRMCNEKGVNPWIEVDGGVTPENAYKVNSMTGANALVAGSAVFK 121
Query: 203 QKGEISYAKRLNDLKKS 219
K SY ++ +K S
Sbjct: 122 AK---SYRDAIHGIKVS 135
>gi|306822314|ref|ZP_07455695.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|309802837|ref|ZP_07696939.1| putative ribulose-phosphate 3-epimerase [Bifidobacterium dentium
JCVIHMP022]
gi|304554476|gb|EFM42382.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|308220590|gb|EFO76900.1| putative ribulose-phosphate 3-epimerase [Bifidobacterium dentium
JCVIHMP022]
Length = 235
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 5/208 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +DF ++ + A H D+MDG F P++ I + + H+
Sbjct: 13 SLYCSDFRNPAAQVE-VLNNYADSYHVDIMDGHFSPSMGLCTTWIEQMMPLCTLRKEVHM 71
Query: 70 MISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M++ ID I+ + AG ++T H ES H R+LR I G G+A+NP T + +E+
Sbjct: 72 MVTDIDHWIDQLVAAGATMLTPHVESLGAHAFRTLRIIRENGCGAGIAVNPLTSFSEMEN 131
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNIKSL 186
+++ ID++ +MTV G+ G+ LI T+ KI + ++ E +DG +N K +
Sbjct: 132 LLERIDLVTVMTVEIGYSGEPLIPETLKKIERLAQFRDAHGLNYEIQIDGSCNEKNFKRM 191
Query: 187 VQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ GAD V+G++ F + +I A +
Sbjct: 192 REVGADTFVLGNTGIFKRSPDIEEAWHM 219
>gi|2894532|emb|CAA11895.1| ribulose-5-phosphate-epimerase [Homo sapiens]
Length = 174
Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 83/147 (56%), Gaps = 4/147 (2%)
Query: 55 RSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
SLR D FD H+M+S + + +A AG + TFH E++ + ++ I G K
Sbjct: 1 ESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMK 60
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +
Sbjct: 61 VGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDI 118
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSS 199
EVDGGV + +AGA+++V GS+
Sbjct: 119 EVDGGVGPDTVHKCAEAGANMIVSGSA 145
>gi|71893503|ref|YP_278949.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae J]
Length = 212
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVFDCHLMISSIDSHINIIADAGCDI 88
G K HFD MDG FV N++ I+++ + + + D HLM + + I + +
Sbjct: 25 GIKWFHFDFMDGIFVKNVAISIPEIKNIIKKSKEFISDVHLMSVNPEEQIKQLL-GYVNF 83
Query: 89 ITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG 147
T H ES + + + + + ++ K G+AI PET + + D++ EI ++LIM+V PG GG
Sbjct: 84 ATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGG 143
Query: 148 QQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
Q IE+T KI + +I + + I ++VDGG+ N K + +GAD++VVG+ +
Sbjct: 144 QAFIENTYKKIEELSKIIQENNYKIIIQVDGGIKDFNSKKVFDSGADVIVVGTFLAEKPT 203
Query: 206 EISYAKRLN 214
++ K +N
Sbjct: 204 KLKIKKLIN 212
>gi|256842024|ref|ZP_05547529.1| ribulose-phosphate 3-epimerase [Parabacteroides sp. D13]
gi|256736340|gb|EEU49669.1| ribulose-phosphate 3-epimerase [Parabacteroides sp. D13]
Length = 221
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 105/202 (51%), Gaps = 5/202 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P + S++ A+ L +I + + G +H D+MD FVPN++FG DV+ S+R
Sbjct: 1 MSPKLS--ASLMCANLVNLERDIQLLEENGVDYLHIDIMDAIFVPNLTFGPDVVNSIRKI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HL++ + + DI++ H E I + I + G+A+NP+
Sbjct: 59 TNLPLDIHLLMEHPRVVVRSMDIREGDIVSIHSECKESIMENAVFIKQKKAQFGLALNPD 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGG 177
T + ++ + +D+IL+M + PGF G +I + K+R+ + + + S I + VDG
Sbjct: 119 TSIEEVKKYLPYVDVILLMLIVPGFAGSSMIHGIMEKVRETRQYLDQHSHTNIEICVDGS 178
Query: 178 VTSRNIKSLVQAGADLLVVGSS 199
V+ + + GA + V G++
Sbjct: 179 VSCERARYMRNLGASIFVGGTA 200
>gi|309777354|ref|ZP_07672315.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914895|gb|EFP60674.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 229
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 4/204 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSI+ AD + +EI + K GA IH+D+MD F +I ++S +
Sbjct: 2 SLMLAPSIMCADLLHMEDEIKELEKGGADFIHYDIMDTTFTTQTMLPFCMIPRIQSITAI 61
Query: 64 VFDCHLMISSIDSHINIIADAGCD-IITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ + D I H E + I +IHA G K +N T
Sbjct: 62 PLDIHLMIDRPERILDKLLPYCKDTYIGIHVEVTKEITSLFSSIHAAGGKCCAILNAGTS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQ-LIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
+ LE+++ IDM+ ++ N GF +Q L E + KIR ++L+ RSI LEVDGGV+
Sbjct: 122 IHCLEEILPYIDMVNLILGNAGFCARQPLNEQLLLKIRNTRSLLDSCDRSILLEVDGGVS 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
+ QAGA++ V+G+ Q
Sbjct: 182 PEVAEKAKQAGANVFVLGTKSIYQ 205
>gi|158314654|ref|YP_001507162.1| ribulose-phosphate 3-epimerase [Frankia sp. EAN1pec]
gi|158110059|gb|ABW12256.1| Ribulose-phosphate 3-epimerase [Frankia sp. EAN1pec]
Length = 246
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + L EI + A HFDV D FVP++ F D++ +LR + F HL
Sbjct: 26 SVWSADLACLRAEIERASPV-ADLFHFDVGDSQFVPDLLFFPDLLAALRPLTTVPFHAHL 84
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ + A AG D+IT H E+ + +L TI GK G+A+ +TPV +
Sbjct: 85 MVRRPAPLAALFAQAGADLITVHAETGDDVHPALDTIRQHGKAAGLALTLDTPVMAVRPY 144
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK----RSISLEVDGGVTSRNIKS 185
+D +D+I+++ G G L + ++R + L+ + +++ + DGG+ +
Sbjct: 145 LDAVDVIVLVGTPIGTRGTGLAPAAFDRLRTLRGLLHETGRDQAVKILADGGIHQPTVGP 204
Query: 186 LVQAGADLLVVGSSFFN 202
L AGAD +V GS F
Sbjct: 205 LADAGADGVVAGSLLFG 221
>gi|54020106|ref|YP_115744.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 232]
gi|53987279|gb|AAV27480.1| ribulose-5-phosphate-3-epimerase [Mycoplasma hyopneumoniae 232]
gi|144227490|gb|AAZ44238.2| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae J]
Length = 216
Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVFDCHLMISSIDSHINIIADAGCDI 88
G K HFD MDG FV N++ I+++ + + + D HLM + + I + +
Sbjct: 29 GIKWFHFDFMDGIFVKNVAISIPEIKNIIKKSKEFISDVHLMSVNPEEQIKQLL-GYVNF 87
Query: 89 ITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG 147
T H ES + + + + + ++ K G+AI PET + + D++ EI ++LIM+V PG GG
Sbjct: 88 ATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGG 147
Query: 148 QQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
Q IE+T KI + +I + + I ++VDGG+ N K + +GAD++VVG+ +
Sbjct: 148 QAFIENTYKKIEELSKIIQENNYKIIIQVDGGIKDFNSKKVFDSGADVIVVGTFLAEKPT 207
Query: 206 EISYAKRLN 214
++ K +N
Sbjct: 208 KLKIKKLIN 216
>gi|319935704|ref|ZP_08010135.1| hypothetical protein HMPREF9488_00966 [Coprobacillus sp. 29_1]
gi|319809362|gb|EFW05797.1| hypothetical protein HMPREF9488_00966 [Coprobacillus sp. 29_1]
Length = 225
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 5/200 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++ PS++ D + EI I A + H D++D + N+S + + +D
Sbjct: 2 KVKLSPSLMCIDLLNIENEIK-ILNMKANEYHVDIIDWHYCKNMSLAPCFMEQISKITDI 60
Query: 64 VFDCHLMISSIDSH-INIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPET 121
D HL + +ID I + +G I+T PE + R R + + + GV INP
Sbjct: 61 PMDAHLYVDNIDMDLIELCCQSGAKILTMPPEIIEKQVYRMKRYLDSQNVQFGVFINPAV 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
+ I++ ID +LIM+V+PGF GQ +E+T+ KI +AK + S+ VDG
Sbjct: 121 SLEIIKPYAHIIDRLLIMSVDPGFAGQPFVEATLKKIAEAKQYREENHYHYSIAVDGCCN 180
Query: 180 SRNIKSLVQAGADLLVVGSS 199
K L +AG D+ +VG+S
Sbjct: 181 ENYYKQLYEAGVDVFIVGTS 200
>gi|310827463|ref|YP_003959820.1| hypothetical protein ELI_1874 [Eubacterium limosum KIST612]
gi|308739197|gb|ADO36857.1| hypothetical protein ELI_1874 [Eubacterium limosum KIST612]
Length = 200
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 2/195 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PS+ +A+ LG E + + G ++H D+ DG F+ NI+FG + SLR+ S F+
Sbjct: 5 IIPSLASANQLCLGTEAELVEQKGYSELHLDIEDGNFIHNITFGERTLLSLRNVSPLHFN 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +++ ++ + FH ES+ HI L G+A P T +
Sbjct: 65 VHLMVTEPVAYLPLLKKLSPCSVFFHAESTQHIAEVLSLFEENNITAGLAFLPFTALNNY 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+I IL+MT P Q I++ + KI++A +++I DGG++ + K+L
Sbjct: 125 AYLIQRCHSILLMTSEPDGKNQCFIDTMVDKIKKASQDFPQQAIW--TDGGISFKRAKTL 182
Query: 187 VQAGADLLVVGSSFF 201
+ AG +V+G FF
Sbjct: 183 LSAGVKKVVIGRDFF 197
>gi|169335419|ref|ZP_02862612.1| hypothetical protein ANASTE_01831 [Anaerofustis stercorihominis DSM
17244]
gi|169258157|gb|EDS72123.1| hypothetical protein ANASTE_01831 [Anaerofustis stercorihominis DSM
17244]
Length = 222
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ D + +I + H D++DG + N SF ++++R + +
Sbjct: 4 KISPSLMCMDLLNIESQIKTLNPY-VYSYHVDIIDGVYFKNFSFTPPFMKAVRKVTSAKL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT---IHAMGKKTGVAINPETP 122
D H+M+ ++ + D G D ++ H E I + RT +HA K+ GV ++PE
Sbjct: 63 DAHVMLVDPFYYLEEMVDCGADCVSIHSEKL--INEAFRTSKFLHARNKEFGVVLSPEVC 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
L I E+D I +MT PGF G I T+ KI Q + ++ + +EVDG V
Sbjct: 121 AETLLPYISEVDKITVMTEEPGFAGGDFIPGTLDKINQLVKIREEKDLHFLIEVDGVVNK 180
Query: 181 RNIKSLVQAGADLLVVGS 198
+ K +AG D+ +VG+
Sbjct: 181 EHFKEYKEAGVDIYIVGN 198
>gi|313606427|gb|EFR83313.1| ribulose-phosphate 3-epimerase, ic [Listeria monocytogenes FSL
F2-208]
Length = 123
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST 154
++PHI R ++ I A G K GV +NP TP ++L+ V+ ++D++L MTVNPGFGGQ I+ST
Sbjct: 1 AAPHIHRVIQQIKAAGCKAGVVLNPGTPASVLDAVLADVDLVLQMTVNPGFGGQPFIDST 60
Query: 155 IPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
I +R + S +EVDGGV + + QAG D+LV GS FF +++
Sbjct: 61 IKNMRYLDNWRRENNGSYVIEVDGGVNAETAEKCKQAGVDVLVAGSYFFGATDKVA 116
>gi|71894143|ref|YP_278251.1| ribulose-phosphate 3-epimerase [Mycoplasma synoviae 53]
gi|71850931|gb|AAZ43540.1| ribulose-phosphate 3-epimerase [Mycoplasma synoviae 53]
Length = 223
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 9/200 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGAD-VIRSLRSYSDSVF 65
+ PSIL + + + ++++ G H+DVMD FV N + D +I+ + +
Sbjct: 9 VTPSILNVEKEKRIDYVNSLIDLGISWFHYDVMDAKFVENTAIEVDEIIKISKKTKSHIK 68
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK---KTGVAINPETP 122
D HLM+ + +++ + D DI TFH E+ + + K + G+AINPET
Sbjct: 69 DVHLMVENPYEYVDKLKDY-VDIFTFHYETIENDLDKFEEFLDLNKHNLRIGLAINPETD 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK----ALIGKRSISLEVDGGV 178
V + ++++ ++L+M+VNPG GGQ IES + KI++ K L ++VDGG+
Sbjct: 128 VERVFPFLEKLTLVLVMSVNPGKGGQAFIESALDKIKKLKFERLNLRKNYEYLIQVDGGI 187
Query: 179 TSRNIKSLVQAGADLLVVGS 198
+ + GA+L VVG+
Sbjct: 188 NNLTGPKCFKKGANLCVVGT 207
>gi|238809982|dbj|BAH69772.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 222
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
+ PS+L + + E + + G K IH+DVMDG FVPN + D I+++ + F
Sbjct: 10 VTPSLLNVEKDKRCEMATLLVNNGIKWIHYDVMDGKFVPNTAIELDEIKNINKNAPKHFK 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + +++ D DI T H E+ + + L+ H+ G+AI P T V
Sbjct: 70 DAHLMVENPLDYLDEFRDH-VDITTIHYEAVNKKELLQFLKDHHS-AYSIGLAIKPATEV 127
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ ++ + ++L+M+V PG GGQ+ IE + KIR+ K L K ++VDGG+
Sbjct: 128 KEIVKILPYLQLVLVMSVEPGKGGQKFIEHAVDKIRELKQLRDKNGYKYLIQVDGGINGE 187
Query: 182 NIKSLVQAGADLLVVGS 198
AG D V G+
Sbjct: 188 TGPRCFAAGVDATVAGT 204
>gi|304383519|ref|ZP_07365979.1| ribulose-phosphate 3-epimerase [Prevotella marshii DSM 16973]
gi|304335329|gb|EFM01599.1| ribulose-phosphate 3-epimerase [Prevotella marshii DSM 16973]
Length = 225
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S++ AD L +I + + +H D+MD FVPN++FG D + S+R S D HL
Sbjct: 12 SLMCADLMNLERDIRRLERLNVDYLHVDIMDAKFVPNLTFGPDTVNSIRCISHLPLDIHL 71
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
++ I + DI+T H E + ++ I G+A+NP+T +
Sbjct: 72 LMEHPSVIIRSVDIREGDIVTLHHECKDSMLENIAFIKQRHALVGLALNPDTSIEEARKY 131
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVTSRNIKSL 186
+ D++L+M + PGF G +I + K+R+ + + K+ +I + VDG V+ + +
Sbjct: 132 LPYTDVVLLMLIVPGFAGSTMIHGIMDKVRKTREYLEKKGYDNIRIAVDGSVSHEKAEMM 191
Query: 187 VQAGADLLVVGSSFFNQKGE 206
GA + + G++ KG+
Sbjct: 192 AAMGASVFIGGTAGVFIKGK 211
>gi|319777628|ref|YP_004137279.1| ribulose-phosphate 3-epimerase [Mycoplasma fermentans M64]
gi|318038703|gb|ADV34902.1| Ribulose-phosphate 3-epimerase [Mycoplasma fermentans M64]
Length = 220
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
+ PS+L + + E + + G K IH+DVMDG FVPN + D I+++ + F
Sbjct: 8 VTPSLLNVEKDKRCEMATLLVNNGIKWIHYDVMDGKFVPNTAIELDEIKNINKNAPKHFK 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + +++ D DI T H E+ + + L+ H+ G+AI P T V
Sbjct: 68 DAHLMVENPLDYLDEFRDH-VDITTIHYEAVNKKELLQFLKDHHS-AYSIGLAIKPATEV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ ++ + ++L+M+V PG GGQ+ IE + KIR+ K L K ++VDGG+
Sbjct: 126 KEIVKILPYLQLVLVMSVEPGKGGQKFIEHAVDKIRELKQLRDKNGYKYLIQVDGGINGE 185
Query: 182 NIKSLVQAGADLLVVGS 198
AG D V G+
Sbjct: 186 TGPRCFAAGVDATVAGT 202
>gi|213026096|ref|ZP_03340543.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 103
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 53 VIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
V++SLR Y + D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G
Sbjct: 2 VLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGC 61
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
K G+ NP T ++ L+ V+D++D+IL+M+VNPGFGGQ I S
Sbjct: 62 KAGLVFNPATSLSYLDYVMDKLDVILLMSVNPGFGGQSFIRS 103
>gi|300949579|ref|ZP_07163571.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300451021|gb|EFK14641.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
Length = 231
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + +LGE + + +H D+MDG F P + G I L + + D HLM
Sbjct: 10 ILAGQWLKLGEYLQTLRALEQPVLHLDLMDGHFCPQFTVGPWAITQLPA--QIIKDVHLM 67
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------------GVAIN 118
+ + + AG +T E+SPH+ L H +G++ G+++
Sbjct: 68 VDNPWPVVQASVKAGAHCVTLQVENSPHLHHML---HWLGEQNTEVSGATMPVLRGISLC 124
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKR-SISLEV 174
P TP+ + VI++++++ I+ VNPG+G + + + +I Q AL+ GKR SI L V
Sbjct: 125 PATPLEHILPVIEDVEIVQILAVNPGYGSKLSKPALLRRIAQVVALLNASGKRDSILLAV 184
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFF 201
DG +T + ++ +G D +V GS+ F
Sbjct: 185 DGSLTLEELPEIIASGVDRVVSGSALF 211
>gi|302669878|ref|YP_003829838.1| ribulose-phosphate 3-epimerase family protein [Butyrivibrio
proteoclasticus B316]
gi|302394351|gb|ADL33256.1| ribulose-phosphate 3-epimerase family protein [Butyrivibrio
proteoclasticus B316]
Length = 241
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ S++ AD+ L E+ + +AG H D+MDG +V N + + + S
Sbjct: 8 FKLCASMMCADYGNLEREVKTLEEAGIDSFHIDIMDGRYVDNFAMSLYDMAYIAKVSTKP 67
Query: 65 FDCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI +I + D + HPE+ H +L+ I G+AINP T
Sbjct: 68 LDVHLMIEHPRRNIELFLKRLRPGDTVYIHPEAEYHPSTTLQKITDAKMHPGIAINPGTS 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V +++++ +D +L+M VNPG Q + KI Q L K L DG +
Sbjct: 128 VETIKEMLRIVDRVLVMAVNPGNASQVFLPYVGEKIEQLIKLRSKMKFELYWDGACGAER 187
Query: 183 IKSLVQAGADLLVVGSS-FFNQKGE----ISYAKRLN-DLKKSALAI 223
+ G D V+G++ F +K IS AKRLN D K+ A+
Sbjct: 188 LLEYAPHGVDGFVLGTTLLFGKKTPYDEIISSAKRLNFDYLKNEAAV 234
>gi|301019472|ref|ZP_07183642.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|299882200|gb|EFI90411.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
Length = 247
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + +LGE + + +H D+MDG F P + G I L + + D HLM
Sbjct: 26 ILAGQWLKLGEYLQTLRALEQPVLHLDLMDGHFCPQFTVGPWAITQLPA--QIIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------------GVAIN 118
+ + + AG +T E+SPH+ L H +G++ G+++
Sbjct: 84 VDNPWPVVQASVKAGAHCVTLQVENSPHLHHML---HWLGEQNTEVSGATMPVLRGISLC 140
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKR-SISLEV 174
P TP+ + VI++++++ I+ VNPG+G + + + +I Q AL+ GKR SI L V
Sbjct: 141 PATPLEHILPVIEDVEIVQILAVNPGYGSKLSKPALLRRIAQVVALLNASGKRDSILLAV 200
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFF 201
DG +T + ++ +G D +V GS+ F
Sbjct: 201 DGSLTLEELPEIIASGVDRVVSGSALF 227
>gi|312382656|gb|EFR28040.1| hypothetical protein AND_04504 [Anopheles darlingi]
Length = 193
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINP 119
+D+ F+ H+M+ + +ADAG TFH E H+ + R + G + G+AI P
Sbjct: 31 TDAFFETHMMVERPQQWVEAMADAGVQQYTFHVEPVVHMVPDVCRKVREAGMRVGLAIKP 90
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V +++ I ++DMILIMTV PGFGGQ + + K++ + +++EVDGGV+
Sbjct: 91 GTAVETIQNYIADVDMILIMTVEPGFGGQMFMADMLEKVQSLRN--NYPLLNIEVDGGVS 148
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I S +AGA+++V G++ + + + L +
Sbjct: 149 PTTIDSCAKAGANMIVSGTAIIRANDQAAVIRELRN 184
>gi|322818995|gb|EFZ26255.1| ribulose-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 162
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 3/134 (2%)
Query: 32 KQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF-DCHLMISSIDSHINIIADAGCDIIT 90
+ +H DV+DG F PN+SF +D + LR + VF D HLM++ + + ADAG T
Sbjct: 24 EWLHVDVIDGHFAPNLSFCSDTVAGLRRHLPHVFLDVHLMVAEPEKWVRPFADAGASQFT 83
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE--IDMILIMTVNPGFGGQ 148
FH E++ I G + GVAI+P T + L +I+ +DM+L+MTV PGF GQ
Sbjct: 84 FHIEATQEPVALASKIRETGMQVGVAISPRTAIDGLIPLIENGYLDMVLVMTVEPGFAGQ 143
Query: 149 QLIESTIPKIRQAK 162
+ + + K+RQ +
Sbjct: 144 KFLSGPLAKVRQLR 157
>gi|167766204|ref|ZP_02438257.1| hypothetical protein CLOSS21_00698 [Clostridium sp. SS2/1]
gi|167712284|gb|EDS22863.1| hypothetical protein CLOSS21_00698 [Clostridium sp. SS2/1]
gi|291560136|emb|CBL38936.1| Pentose-5-phosphate-3-epimerase [butyrate-producing bacterium
SSC/2]
Length = 226
Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 7/223 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+ D + ++ I + +H D+ DG +VP+ G + + +L+
Sbjct: 1 MERKLMIAPSMGCCDLFDMERQV-RIIDEKSDFLHMDIKDGVYVPSFGIGPEFLAALKDK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLMI ++ A AG IT H + ++ I +G K G+A+NP
Sbjct: 60 VSTPMDAHLMIKHPQQYLETFAKAGAAYITPHTDCIEGDAFVTINKIKELGCKAGIALNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
P+ +E + +D + IM V+ G GQ++IE T KIR+ + ++ + +E DG
Sbjct: 120 SVPLETIEYYLPLLDKVTIMIVDAGISGQKVIEQTYDKIRKLVKIREEKGLDFLIEADGS 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLK 217
+ + L +AGAD++V+G K E ++A N+L+
Sbjct: 180 MNRDVYRPLYEAGADMVVLGPPALWNKADDFEEAWAIMENELE 222
>gi|323694539|ref|ZP_08108706.1| hypothetical protein HMPREF9475_03570 [Clostridium symbiosum
WAL-14673]
gi|323501413|gb|EGB17308.1| hypothetical protein HMPREF9475_03570 [Clostridium symbiosum
WAL-14673]
Length = 245
Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I S+ +AD RLG +I IT AGA +H D+MDG FVP F I+ + +
Sbjct: 1 MTVS-KIFASVFSADCLRLGADIRRITAAGADGLHIDIMDGEFVPLFGFNNIWIQQIGAA 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAIN 118
S D H+M + + + H ES P ++ + + G G+AI+
Sbjct: 60 STLPLDLHIMSGESARILERLDLSRVVSAAVHVESGPGSGLQAVFKLMRKRGISCGLAIS 119
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGG 177
P T + LE ++EID IL+M+ PG +E T +IR+ K ++ R + VDGG
Sbjct: 120 PRTSIEKLEPYLEEIDGILVMSCQPGVQNAGFLEDTYSRIREIKGMLRDRPECYIGVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + ++ GA V+G F
Sbjct: 180 LDLEKAERCIKCGASRAVIGRYLFRH 205
>gi|289608206|emb|CBI60633.1| unnamed protein product [Sordaria macrospora]
Length = 127
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 87/142 (61%), Gaps = 18/142 (12%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
MDG PN++ G V+++LR +S FD HLM+S +D + A+AG
Sbjct: 1 MDGISSPNLTIGPAVVKALRPHSAKPFDVHLMVSPVDPLVEAFAEAG------------- 47
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
R R I +GK+ GV +NP TPV +++ V+D D++L+M+VNPGFGGQ+ I+S + KI
Sbjct: 48 --RYPR-IKTLGKRAGVVLNPGTPVEVVDHVLDLTDLLLVMSVNPGFGGQKFIDSQLRKI 104
Query: 159 RQAKALIGK--RSISLEVDGGV 178
Q +A I R+I L+VDGG+
Sbjct: 105 EQLRARIDATGRAIDLQVDGGI 126
>gi|240047741|ref|YP_002961129.1| ribulose-phosphate 3-epimerase [Mycoplasma conjunctivae HRC/581]
gi|239985313|emb|CAT05326.1| Ribulose-phosphate 3-epimerase [Mycoplasma conjunctivae]
Length = 217
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 5/196 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVF 65
I PSIL A S+ + + + G K IH+D MDG FV N + D IR + S + + +
Sbjct: 5 ISPSILNATKSQRMKLVQTLFNLGIKWIHYDFMDGKFVSNTAITTDEIRKITSKFPNYIS 64
Query: 66 DCHLMISSIDSHIN-IIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM + I II I F + I +R K G+AI T +
Sbjct: 65 DIHLMSYQPEQQIKEIIGFVDYATIHFEALTKEEIYAIIRKFQNQIK-LGIAIKINTKIE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
+E+ + ID++LIM+V PG GGQ+ ++ KI Q + +I K +I ++VDGG+ N
Sbjct: 124 EIEEFLPFIDLVLIMSVEPGKGGQEFNPISLQKISQLRKIIDLHKFNILIQVDGGIKDFN 183
Query: 183 IKSLVQAGADLLVVGS 198
+ +AGA+++V G+
Sbjct: 184 ASQVFKAGANIVVAGT 199
>gi|303389664|ref|XP_003073064.1| D-ribulose 5 phosphate 3 epimerase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302208|gb|ADM11704.1| D-ribulose 5 phosphate 3 epimerase [Encephalitozoon intestinalis
ATCC 50506]
Length = 220
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 16/209 (7%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
SIL DF RL EE+ ++ + G +H DVMD FV NI+FG +I + + D VFD H+
Sbjct: 9 SILDCDFLRLEEELQDLKRNGVTNVHLDVMDTTFVKNITFGPCIINRILEH-DFVFDIHM 67
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ S I I ++T H E S +R L+ + G+AINPET V E
Sbjct: 68 MVESPLDVIMRIDLRKVTLVTIHHEISNKRGVREYLKQRDVL---FGIAINPETRV---E 121
Query: 128 DV-IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+V ++ ID +L+M+V+PGFGGQ+ + K+ + +RS + G
Sbjct: 122 EVGMEGIDFVLVMSVSPGFGGQRFQRECLAKVEEI-----QRSGKIVGIDGGIGIENIKE 176
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ G D VVGS +F K + + + +
Sbjct: 177 IR-GVDYAVVGSGYFRSKDRKRFLEEITE 204
>gi|308190260|ref|YP_003923191.1| ribulose-phosphate 3-epimerase [Mycoplasma fermentans JER]
gi|307625002|gb|ADN69307.1| ribulose-phosphate 3-epimerase [Mycoplasma fermentans JER]
Length = 220
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 7/197 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
+ PS+L + + E + + G K IH+DVMDG FVPN + D I+++ + F
Sbjct: 8 VTPSLLNVEKDKRCEMATLLVNNGIKWIHYDVMDGKFVPNTAIELDEIKNINKNAPKHFK 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + +++ D DI T H E+ + + L+ H+ G+AI P T V
Sbjct: 68 DAHLMVENPLDYLDEFRDH-VDITTIHYEAVNKKELLQFLKDHHS-AYSIGLAIKPATEV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ ++ + ++L+M+V PG GGQ+ I+ + KIR+ K L K ++VDGG+
Sbjct: 126 KEIVKMLPYLQLVLVMSVEPGKGGQKFIDHAVDKIRELKQLRDKNGYKYLIQVDGGINGE 185
Query: 182 NIKSLVQAGADLLVVGS 198
AG D V G+
Sbjct: 186 TGPRCFAAGVDATVAGT 202
>gi|323485556|ref|ZP_08090902.1| hypothetical protein HMPREF9474_02653 [Clostridium symbiosum
WAL-14163]
gi|323401204|gb|EGA93556.1| hypothetical protein HMPREF9474_02653 [Clostridium symbiosum
WAL-14163]
Length = 245
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I S+ +AD RLG +I IT AGA +H D+MDG FVP F I+ + +
Sbjct: 1 MTVS-KIFASVFSADCLRLGADIRRITAAGADGLHIDIMDGEFVPLFGFNNIWIQQIGAA 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAIN 118
S D H+M + + + H ES P ++ + + G G+AI+
Sbjct: 60 STLPLDLHIMSGESARILERLDLSRVVSAAVHVESGPGSGLQTVFKLMRKRGISCGLAIS 119
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGG 177
P T + LE ++EID IL+M+ PG +E T ++R+ K ++ R + VDGG
Sbjct: 120 PRTSIEKLEPYLEEIDGILVMSCQPGVQNAGFLEDTYSRLREIKGMLRDRPECYIGVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + ++ GA V+G F
Sbjct: 180 LDLEKAERCIKCGASRAVIGRYLFRH 205
>gi|16760263|ref|NP_455880.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|25292418|pir||AC0667 ribulose-phosphate 3-epimerase (EC 5.1.3.1) - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502558|emb|CAD01708.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 210
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ ++ DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AVECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|300087701|ref|YP_003758223.1| ribulose-phosphate 3-epimerase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527434|gb|ADJ25902.1| Ribulose-phosphate 3-epimerase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 217
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I+IVP+IL D L + +I + D+MDG FVP+ S G + IR R
Sbjct: 1 MSP-IRIVPAILTDDPQEL-TAMRDIMSGVVDWVQVDIMDGRFVPSRSIGWEEIRDARLP 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ HLM+ + + AG + + FH E+ G G+A+NPE
Sbjct: 59 FG--WEAHLMVENPVDYFKGFKAAGAERVIFHYETVSDPSTVTVAAREAGLTVGMAVNPE 116
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T V + +D +D +L+M+V+PGF G + + + KI Q + +++ +DGG+
Sbjct: 117 TSVEDICQWLDSLDHVLLMSVHPGFYGAKFLPEVLAKIEQLRRY--APGLTIGIDGGIKE 174
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N+ + G D + VGS F + +RL + S
Sbjct: 175 ENLLEVASRGVDDICVGSGVFRATDPAAAFQRLQAMVTS 213
>gi|291542093|emb|CBL15203.1| Pentose-5-phosphate-3-epimerase [Ruminococcus bromii L2-63]
Length = 233
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 7/213 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ I PS+ D + E++ I + + +H D+ DG +VP+ G D + L + ++
Sbjct: 3 KLMIAPSVGCCDLFHVEEQVKLINEK-SDYLHMDIKDGVYVPSYGIGPDYLDYLNKHVEN 61
Query: 64 V--FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ ++ A AG IT H + ++ I +G K GVA++P
Sbjct: 62 LKPMDAHLMVKHPQQYLETFAKAGAAYITPHTDCIEGDAFVTIHKIKELGCKAGVALSPS 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
P++ +E + +D + IM V+PG GQ + KI Q + +R ++ +E DG +
Sbjct: 122 VPLSTIEYYLPLLDKVTIMIVDPGIAGQPVDPQMFVKINQLAKIRKERGLNFLIEADGSM 181
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYA 210
S + L +AGADL+++G + +N+ + + A
Sbjct: 182 NSSLYRPLYEAGADLVILGPPALWNKDTDFNKA 214
>gi|313678688|ref|YP_004056428.1| ribulose-phosphate 3-epimerase [Mycoplasma bovis PG45]
gi|312950103|gb|ADR24698.1| putative ribulose-phosphate 3-epimerase [Mycoplasma bovis PG45]
Length = 220
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 7/197 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
+ PS+L + + + G K IH+DVMDG FVPN + + I+++ S F
Sbjct: 8 VTPSLLNVEPENRLNMANTLINEGIKWIHYDVMDGKFVPNFAIELNEIKNIHENSLKHFK 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I+ D DI+T H E+ + L+ H + G+AI P T V
Sbjct: 68 DAHLMIENPLDYIDQYKDV-VDIVTVHYEAIDPTKFLKFLKQKHH-DYRLGIAIKPNTDV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
++ + I ++L+M+V PG GGQ+ I + I KI+ K L ++VDGG+
Sbjct: 126 EKIKKFLPYIQLVLVMSVEPGKGGQKFIPTAIDKIKMLKQLRINNNYDYLIQVDGGINDT 185
Query: 182 NIKSLVQAGADLLVVGS 198
+AGAD V G+
Sbjct: 186 TGPECFKAGADACVAGT 202
>gi|72080490|ref|YP_287548.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 7448]
Length = 212
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 30 GAKQIHFDVMDGCFVPNISFG-ADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDI 88
G K HFD MDG FV N++ ++ ++ + D HLM + + I + +
Sbjct: 25 GIKWFHFDFMDGIFVKNVAISIPEIKNIIKKSKKFISDVHLMSVNPEEQIKQLL-GYVNF 83
Query: 89 ITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG 147
T H ES + + + + + ++ K G+AI PET + + D++ EI ++LIM+V PG GG
Sbjct: 84 ATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGG 143
Query: 148 QQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
Q IE+T KI + +I + + I ++VDGG+ N K + +GAD++VVG+ +
Sbjct: 144 QAFIENTYKKIEELSKIIQENNYKIIIQVDGGIKDFNSKRVFDSGADVIVVGTFLAEKPT 203
Query: 206 EISYAKRLN 214
++ K +N
Sbjct: 204 KLKIKKLIN 212
>gi|144575301|gb|AAZ53525.2| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 7448]
Length = 216
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 5/189 (2%)
Query: 30 GAKQIHFDVMDGCFVPNISFG-ADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDI 88
G K HFD MDG FV N++ ++ ++ + D HLM + + I + +
Sbjct: 29 GIKWFHFDFMDGIFVKNVAISIPEIKNIIKKSKKFISDVHLMSVNPEEQIKQLL-GYVNF 87
Query: 89 ITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG 147
T H ES + + + + + ++ K G+AI PET + + D++ EI ++LIM+V PG GG
Sbjct: 88 ATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGG 147
Query: 148 QQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
Q IE+T KI + +I + + I ++VDGG+ N K + +GAD++VVG+ +
Sbjct: 148 QAFIENTYKKIEELSKIIQENNYKIIIQVDGGIKDFNSKRVFDSGADVIVVGTFLAEKPT 207
Query: 206 EISYAKRLN 214
++ K +N
Sbjct: 208 KLKIKKLIN 216
>gi|266621604|ref|ZP_06114539.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
gi|288866702|gb|EFC99000.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
Length = 210
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 108/212 (50%), Gaps = 4/212 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDS 63
++++PSI +AD +GE + + +H D+ DG FVPNI+FG +R++ +
Sbjct: 1 MKLMPSIASADPLAVGEVLKKLE--AWPYLHIDIEDGNFVPNITFGMKAVRAICKKAGKR 58
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
HLM++ +++++ +A G D + H E+ + L A+G + G+A+N +TPV
Sbjct: 59 YIQVHLMVTHPETYLDGLAACGVDSVIAHLEALDYPLHFLNHCRALGLEPGLAVNIKTPV 118
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ + +D +L+MT P + +++ + ++ + I + L DGGVT +
Sbjct: 119 EAVKPFLGNMDQLLLMTSEPDYLEEKVYGPAVERLIRLAGNI-PAGVELYADGGVTRETL 177
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ L +AG V+G F + K L +
Sbjct: 178 RELEEAGVHGAVLGRLVFQSPDPLEMLKELKE 209
>gi|219119800|ref|XP_002180652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408125|gb|EEC48060.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%), Gaps = 18/213 (8%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPN---ISFGADVIRSLRSYSDS 63
I PS+LA+D+S + EI KAG+ + H D+ DG F+ + ++FG +++++R D+
Sbjct: 1 ISPSLLASDWSDIKGEIQRCLKAGSLRFHVDIFDGVFLDSPYALTFGPQMVKAIRRSCDT 60
Query: 64 ------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTG 114
D H+ + ++ +A AG F E++ + ++ + + G + G
Sbjct: 61 STDRKVALDLHVCVDRPARYVMPMAKAGATCFIFQIEATSQMEDAIALAQLVVDAGMQCG 120
Query: 115 VAINPETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--- 169
+++NP T V + +++ + ++ I+ V PGFGGQ + + K+R A R
Sbjct: 121 ISLNPATRVEAIVPLLETGLVSVVDILAVEPGFGGQDFQRTALDKVRFLHAWNTSRPREN 180
Query: 170 -ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ + VDGG+ I +++AGA +LV GS F
Sbjct: 181 IVDIMVDGGINKDTIAQVLEAGAKILVAGSFLF 213
>gi|29141970|ref|NP_805312.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213426263|ref|ZP_03359013.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586339|ref|ZP_03368165.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213857384|ref|ZP_03384355.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825669|ref|ZP_06544840.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|291080768|ref|ZP_06535058.2| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
gi|29137599|gb|AAO69161.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
Length = 210
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|114583063|ref|XP_001145717.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase isoform 5
[Pan troglodytes]
gi|114583065|ref|XP_001145784.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase isoform 6
[Pan troglodytes]
Length = 160
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
H+M+S + + +A AG + TFH E++ + ++ I G K G+AI P T V L
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLA 61
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV +
Sbjct: 62 PWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGVGPDTVHKCA 119
Query: 188 QAGADLLVVGSSFF 201
+AGA+++V GS+
Sbjct: 120 EAGANMIVSGSAIM 133
>gi|148667819|gb|EDL00236.1| ribulose-5-phosphate-3-epimerase, isoform CRA_b [Mus musculus]
gi|149016013|gb|EDL75294.1| similar to Ribulose-5-phosphate-3-epimerase, isoform CRA_a [Rattus
norvegicus]
gi|149016014|gb|EDL75295.1| similar to Ribulose-5-phosphate-3-epimerase, isoform CRA_a [Rattus
norvegicus]
Length = 160
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
H+M+S + + +A AG + TFH E++ + ++ I G K G+AI P T V L
Sbjct: 2 HMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTTVEYLA 61
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
++IDM L+MTV PGFGGQ+ +E +PK+ + ++ +EVDGGV ++
Sbjct: 62 PWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PTLDIEVDGGVGPDTVQKCA 119
Query: 188 QAGADLLVVGSSFF 201
+AGA+++V GS+
Sbjct: 120 EAGANMIVSGSAIM 133
>gi|255017919|ref|ZP_05290045.1| hypothetical protein LmonF_09655 [Listeria monocytogenes FSL
F2-515]
Length = 134
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 74/128 (57%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
++ + AD G DII HPE+ H R+L I GKK G+AINP T +A +++++ +D +
Sbjct: 2 YVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDNV 61
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
++MTVNPGF GQ+ ++ KI + L + + VDG ++ I L Q G V+
Sbjct: 62 MVMTVNPGFAGQKYLDYVDVKIAELVELKKDYTFEIMVDGAISPEKISKLSQLGVKGFVL 121
Query: 197 GSSFFNQK 204
G+S +K
Sbjct: 122 GTSALLRK 129
>gi|283834389|ref|ZP_06354130.1| ribulose-phosphate 3-epimerase [Citrobacter youngae ATCC 29220]
gi|291069930|gb|EFE08039.1| ribulose-phosphate 3-epimerase [Citrobacter youngae ATCC 29220]
Length = 247
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + +LGE + ++ +H D+MDG F P + G I L + D HLM
Sbjct: 26 ILAGQWLKLGEYLQDLRALEQPVLHLDLMDGHFCPQFTVGPWAIAQLPQ--QMIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------------GVAIN 118
+ + + AG +T E++PH+ L H +G++ G+++
Sbjct: 84 VDNPWPVVQASVKAGAHCVTLQVENTPHLHHML---HWLGEQNAEVSGGKMPVLRGISLC 140
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKR-SISLEV 174
P TP+ + VI++++++ I+ VNPG+G + + + +I Q AL+ GKR +I L V
Sbjct: 141 PATPLEHILPVIEDVEIVQILAVNPGYGSKLSRSALLRRIAQVVALLNAAGKRDAILLTV 200
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFF 201
DG + + ++ +G D +V GS+ F
Sbjct: 201 DGSLNLEELPEIIASGVDRVVSGSALF 227
>gi|294155571|ref|YP_003559955.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase)
[Mycoplasma crocodyli MP145]
gi|291600048|gb|ADE19544.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase)
[Mycoplasma crocodyli MP145]
Length = 219
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L + S+ + + + KAG K IH+DVMD FVPN + I ++ F
Sbjct: 6 NITPSLLNVEESKRLDMANTLIKAGIKWIHYDVMDEKFVPNKAIQISEIANISKNGLKHF 65
Query: 66 -DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI--HAMGKKTGVAINPETP 122
D HLM+ + +IN + D D+ITFH E+ + + K G+AI P T
Sbjct: 66 KDAHLMVVNPLDYINDLKDI-VDVITFHWEAFDDKEDFYDWLIQNYDDYKIGLAIKPNTK 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V + D + I ++L+M+V PG GGQ I S + KI+ +S + ++VDGG+
Sbjct: 125 VEEIVDFLPYISLVLVMSVEPGKGGQSFIPSALDKIKFLYETRISKSYNYLIQVDGGINQ 184
Query: 181 RNIKSLVQAGADLLVVGS 198
K + GAD LV G+
Sbjct: 185 DTSKLCFKNGADALVAGT 202
>gi|167549905|ref|ZP_02343663.1| protein SgcE [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205324917|gb|EDZ12756.1| protein SgcE [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 210
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y+ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|304373209|ref|YP_003856418.1| Ribulose-phosphate 3-epimerase [Mycoplasma hyorhinis HUB-1]
gi|304309400|gb|ADM21880.1| Ribulose-phosphate 3-epimerase [Mycoplasma hyorhinis HUB-1]
Length = 218
Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 24/206 (11%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PS+L ++ + + G K IH+D MD FVPN + I+ + +S+ +
Sbjct: 6 ISPSLLNVSKNQRIKVSKTLFNLGIKWIHYDYMDAKFVPNKAIEIFEIKKIVNKFSNYIS 65
Query: 66 DCHLMISS----IDSHINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAIN 118
D H+M + ID IN++ A TFH E ++ +I+ + ++ K G+AIN
Sbjct: 66 DIHIMAYNPEKIIDQIINVVTYA-----TFHYEVFENASNIKDFIAK-YSSKIKLGIAIN 119
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST------IPKIRQAKALIGKRSISL 172
P+T +L +D+ID++L+M+V PG GGQ IE++ + KIR+ K K +
Sbjct: 120 PDTSEEVLLPFLDKIDLVLVMSVVPGKGGQLFIENSYKKIANLAKIRKEK----KYKFLI 175
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGS 198
+VDGG+ N K + GAD++V G+
Sbjct: 176 QVDGGIKDFNAKKVFDFGADVIVSGT 201
>gi|302531815|ref|ZP_07284157.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
gi|302440710|gb|EFL12526.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
Length = 240
Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + LG E++ + A H D D FVP+ F D++ +LRS++ F H+
Sbjct: 18 SLWSADLADLGAEVARLAPY-ADVFHIDASDTRFVPSPLFFPDLVAALRSHTQVPFHVHV 76
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M + A AG D+++ H E+ + +L+ + A G G+A+ +TPV +
Sbjct: 77 MAEQALPLVEDFARAGADLLSVHAEAD-DVVAALQAVRARGGAAGLALRLDTPVDTVGAY 135
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSRNIKSL 186
+D++D ++++ G G + ++RQ +AL G+ + + DGG+ + L
Sbjct: 136 LDDVDFVVLIGTPLGTKGTAMDPVAPNRVRQLRALAARTGRDQLPVIADGGIRENTVPDL 195
Query: 187 VQAGADLLVVGSSFFNQK 204
AGAD +VVGS K
Sbjct: 196 ADAGADAVVVGSLLLGSK 213
>gi|309803285|ref|ZP_07697382.1| ribulose-phosphate 3-epimerase family protein [Lactobacillus iners
LactinV 11V1-d]
gi|308164793|gb|EFO67043.1| ribulose-phosphate 3-epimerase family protein [Lactobacillus iners
LactinV 11V1-d]
Length = 121
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 2 IAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDMEI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 62 EIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPV 119
>gi|213619061|ref|ZP_03372887.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 179
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 2/176 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS H
Sbjct: 6 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHPLSFH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 66 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 125
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ ++ DGG+T R +
Sbjct: 126 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AVECWADGGITLRAAR 179
>gi|16764961|ref|NP_460576.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|161613925|ref|YP_001587890.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167992788|ref|ZP_02573884.1| protein SgcE [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|16420142|gb|AAL20535.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|161363289|gb|ABX67057.1| hypothetical protein SPAB_01663 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205329015|gb|EDZ15779.1| protein SgcE [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|261246810|emb|CBG24624.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267993542|gb|ACY88427.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158145|emb|CBW17642.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312912605|dbj|BAJ36579.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321224240|gb|EFX49303.1| Protein sgcE [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|332988504|gb|AEF07487.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 210
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y+ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q + + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|323129886|gb|ADX17316.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
Length = 214
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y+ H
Sbjct: 9 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHPLSFH 68
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 69 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLLPYRY 128
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q + + DGG+T R + L
Sbjct: 129 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHFP--AAECWADGGITLRAARLLAA 186
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 187 AGAQHLVIGRALFT 200
>gi|223936704|ref|ZP_03628614.1| Ribulose-phosphate 3-epimerase [bacterium Ellin514]
gi|223894555|gb|EEF61006.1| Ribulose-phosphate 3-epimerase [bacterium Ellin514]
Length = 122
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
++P I I PS+LAADF+R G E + K+GA +H D+MDG FVPNISFG V+R++R +
Sbjct: 6 LSPMI-IAPSLLAADFARFGSETVRVDKSGADWLHLDIMDGHFVPNISFGPQVVRTVRPF 64
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE 94
S FD HLM S + + A AG D I H E
Sbjct: 65 SKLFFDVHLMCSKPEILLEPFAKAGADQINVHVE 98
>gi|116248709|ref|YP_764550.1| putative D-allulose-6-phosphate 3-epimerase [Rhizobium
leguminosarum bv. viciae 3841]
gi|115253359|emb|CAK11747.1| putative D-allulose-6-phosphate 3-epimerase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 233
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD RL ++++ + + +H DV DG F P + F D++ +R S HL
Sbjct: 22 SVWSADLVRLADDLARVDR-HVDVLHIDVADGHFAPAMLFFPDLVAGVRKVSARPIHVHL 80
Query: 70 MISS--IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+S + S I ADAG D+I+ H E+ +L + G G+ + +TPV +E
Sbjct: 81 MVSDSILLSQIEQFADAGSDLISLHVENESVAAEALDLLDRRGVAAGMVLKVDTPVERVE 140
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI----GKRSISLEVDGGVTSRNI 183
+ + ++ G GQ L E +++QAK +I I L DGG+ +
Sbjct: 141 KYASRLRFVTLLGTAIGVKGQGLDEKAGARLQQAKQIIAGCGAAHRIVLAADGGIREHTV 200
Query: 184 KSLVQAGADLLVVGSSFFN 202
L Q+GA+ +V+GS FN
Sbjct: 201 PLLRQSGAETVVLGSLAFN 219
>gi|213162191|ref|ZP_03347901.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 185
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 2/179 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS H
Sbjct: 9 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHPLSFH 68
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 69 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 128
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 129 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITLRAARLLA 185
>gi|293364112|ref|ZP_06610846.1| ribulose-phosphate 3-epimerase [Mycoplasma alligatoris A21JP2]
gi|292552313|gb|EFF41089.1| ribulose-phosphate 3-epimerase [Mycoplasma alligatoris A21JP2]
Length = 216
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L + ++ E + + AG K IH+D+MDG FVPN + I ++ F
Sbjct: 4 NITPSLLNVEENKRLEMANTLINAGIKWIHYDIMDGKFVPNTAIKTSEIANIHKNGLRHF 63
Query: 66 -DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI--HAMGKKTGVAINPETP 122
D HLM+ + +++ + D D++T H E+ + + + K G+AI P T
Sbjct: 64 KDAHLMVENPLNYLEELKDI-VDVMTVHWEAFDDKDEFYDWLDQNYVDYKIGLAIKPNTS 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
V + D + + ++L+M+V PG GGQ I +++ KI+ K ++ +++VDGG+
Sbjct: 123 VEEIIDFLPYVALVLVMSVEPGKGGQAFIPTSLDKIKFLSEYRHKNNLGYAIQVDGGINQ 182
Query: 181 RNIKSLVQAGADLLVVGS 198
K + GAD LV G+
Sbjct: 183 DTSKLCFKNGADALVAGT 200
>gi|309777355|ref|ZP_07672316.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914896|gb|EFP60675.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 226
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+ PS+ AD+ L +EI + +AGA +H D+MD + I F +I +++
Sbjct: 1 MKRKIKFAPSLERADWLNLEQEIHALEQAGADMLHLDIMDRTYGETILFSPRIIPAIKQI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
++ D H+ +S + + + D + E+ + + ++ I G ++I+
Sbjct: 61 TNLPLDIHMYVSDPKVYFDEMFQCLDAHDYVNLEMEAVQDLAKLMQLIREGGSIPAISID 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDG 176
+TPV +LE+++ +DM+ ++ + G Q + E + KI Q + L + LEVDG
Sbjct: 121 IQTPVYMLEELVPYVDMVNVIIRSAGCRYQPIREHILEKIAQIRKLFLSQHKQFELEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ ++ LV+ GAD+LV+G+ +K +++Y + L+
Sbjct: 181 SINFKDSVLLVEQGADILVLGTKVIFRK-DLTYKESCQKLR 220
>gi|224583890|ref|YP_002637688.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|224468417|gb|ACN46247.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 214
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ +
Sbjct: 1 MEVSMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSLHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q++ + DGG+T
Sbjct: 121 TPLLSYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHFP--AAECWADGGITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
R + L AGA LV+G + F
Sbjct: 179 RAARLLAAAGAQHLVIGRALFT 200
>gi|168819402|ref|ZP_02831402.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205343806|gb|EDZ30570.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320085894|emb|CBY95668.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 210
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + +H D+ D F+ NI+FG I+++ Y+ H
Sbjct: 5 PSLASADPLRYAEALTALHDVPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|168241167|ref|ZP_02666099.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194451933|ref|YP_002045656.1| epimerase [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194410237|gb|ACF70456.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205339520|gb|EDZ26284.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
Length = 210
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSLH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLSYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|313631710|gb|EFR98927.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
Length = 118
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
R ++ I G K GV +NP TP ++L ++ ++D++L MTVNPGFGGQ I+ST+ +R
Sbjct: 2 RVIQQIKQAGCKAGVVLNPGTPASVLNAILGDVDLVLQMTVNPGFGGQAFIDSTLENMRY 61
Query: 161 AKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K S +EVDGGV + + QAG D+LV GS FF + +I+ K L
Sbjct: 62 LDNWRRKNRGSYVIEVDGGVNAETAEKCKQAGVDVLVAGSYFFGAEDKIACVKGL 116
>gi|163790119|ref|ZP_02184553.1| allulose-6-phosphate 3-epimerase [Carnobacterium sp. AT7]
gi|159874610|gb|EDP68680.1| allulose-6-phosphate 3-epimerase [Carnobacterium sp. AT7]
Length = 188
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 44 VPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RS 102
+PNI+ I +R SD HLM++ + + D C++I H E + R
Sbjct: 1 MPNITLSPWFIEEVRKISDLPMSVHLMVTDPSFWVQQLVDMKCELICMHAEVLDGLAFRL 60
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---R 159
+ I G K GV +NPETP+ + I+ +D I IMTV+PGF GQ+LI+ST+ KI R
Sbjct: 61 IDQIQNAGLKAGVVLNPETPIETIFPYIELVDKITIMTVDPGFAGQRLIDSTLDKIVSLR 120
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ + G + + +E+DG ++ K + A D+ ++G S
Sbjct: 121 ELREENGYQYV-IEMDGSSNRKSFKRIDAADPDIYIIGRS 159
>gi|168230033|ref|ZP_02655091.1| protein SgcE [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194469708|ref|ZP_03075692.1| protein SgcE [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456072|gb|EDX44911.1| protein SgcE [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205335452|gb|EDZ22216.1| protein SgcE [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 210
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSLH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|330723930|gb|AEC46300.1| ribulose-phosphate 3-epimerase [Mycoplasma hyorhinis MCLD]
Length = 218
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 24/206 (11%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
I PS+L ++ + + G + IH+D MD FVPN + I+ + +S+ +
Sbjct: 6 ISPSLLNVSKNQRIKVSKTLFNLGIEWIHYDYMDVKFVPNKAIEIFEIKKIVNKFSNYIS 65
Query: 66 DCHLMISS----IDSHINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAIN 118
D H+M + ID IN++ A TFH E ++ +I+ + ++ K G+AIN
Sbjct: 66 DIHIMAYNPEKIIDQIINVVTYA-----TFHYEVFENASNIKDFIAK-YSSKIKLGIAIN 119
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST------IPKIRQAKALIGKRSISL 172
P+T +L +D+ID++L+M+V PG GGQ IE++ + KIR+ K K +
Sbjct: 120 PDTSEEVLLPFLDKIDLVLVMSVVPGKGGQLFIENSYKKIANLAKIRKEK----KYKFLI 175
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGS 198
+VDGG+ N K + +GAD++V G+
Sbjct: 176 QVDGGIKDFNAKKVFDSGADVIVSGT 201
>gi|322714656|gb|EFZ06227.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 214
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 2/202 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ +
Sbjct: 1 MEVSMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSLHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q++ + DGG+T
Sbjct: 121 TPLLSYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSRDHFP--AAECWADGGITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
R + L AGA LV+G + F
Sbjct: 179 RAARLLAAAGAQHLVIGRALFT 200
>gi|220941751|emb|CAX15452.1| ribulose-5-phosphate-3-epimerase [Danio rerio]
Length = 137
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 53 VIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG 110
++ LRS D FD H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 1 MVECLRSCIGPDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLEATSNPGNLIKEIRESG 60
Query: 111 KKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI 170
K G+AI P T V L +IDM L+MTV PGFGGQ+ +E +PK+ + S+
Sbjct: 61 MKVGLAIKPGTTVEELAPWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRGQF--PSL 118
Query: 171 SLEVDGGVTSRNIKSLVQA 189
+EVDGGV +I +A
Sbjct: 119 DIEVDGGVGPDSIHRCAEA 137
>gi|168235736|ref|ZP_02660794.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168462937|ref|ZP_02696868.1| protein SgcE [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194738190|ref|YP_002114641.1| epimerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194713692|gb|ACF92913.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195634309|gb|EDX52661.1| protein SgcE [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197291158|gb|EDY30511.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 210
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|200390471|ref|ZP_03217082.1| protein SgcE [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204927495|ref|ZP_03218696.1| protein SgcE [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|199602916|gb|EDZ01462.1| protein SgcE [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322837|gb|EDZ08033.1| protein SgcE [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|322614867|gb|EFY11792.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322619308|gb|EFY16188.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322623120|gb|EFY19962.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322628410|gb|EFY25198.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634816|gb|EFY31547.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322638618|gb|EFY35313.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322640993|gb|EFY37640.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322645424|gb|EFY41952.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322651690|gb|EFY48062.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322654407|gb|EFY50729.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322661249|gb|EFY57475.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665023|gb|EFY61211.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322667767|gb|EFY63927.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322671821|gb|EFY67942.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322677133|gb|EFY73197.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322680203|gb|EFY76242.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322685367|gb|EFY81363.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323194746|gb|EFZ79935.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323204403|gb|EFZ89411.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323205820|gb|EFZ90783.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323213875|gb|EFZ98650.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323218229|gb|EGA02940.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323219089|gb|EGA03593.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323223897|gb|EGA08195.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323232009|gb|EGA16116.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323234536|gb|EGA18623.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323237988|gb|EGA22047.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243410|gb|EGA27429.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323246433|gb|EGA30415.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323253718|gb|EGA37545.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323257707|gb|EGA41391.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323260802|gb|EGA44406.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323266531|gb|EGA50018.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323271255|gb|EGA54682.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
Length = 210
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|168260189|ref|ZP_02682162.1| protein SgcE [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|194442867|ref|YP_002040863.1| epimerase [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|197263162|ref|ZP_03163236.1| protein SgcE [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|194401530|gb|ACF61752.1| protein SgcE [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|197241417|gb|EDY24037.1| protein SgcE [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205350774|gb|EDZ37405.1| protein SgcE [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 210
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVNQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|62180183|ref|YP_216600.1| epimerase [Salmonella enterica subsp. enterica serovar Choleraesuis
str. SC-B67]
gi|62127816|gb|AAX65519.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 210
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSLH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLSYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIATMCEKVSQSRDHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|238911853|ref|ZP_04655690.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 210
Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|197250246|ref|YP_002146419.1| epimerase [Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197213949|gb|ACH51346.1| protein SgcE [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
Length = 210
Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|207856889|ref|YP_002243540.1| epimerase [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|206708692|emb|CAR33018.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
Length = 210
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q + + DGG+T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHFP--AAECWADGGITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|167745973|ref|ZP_02418100.1| hypothetical protein ANACAC_00668 [Anaerostipes caccae DSM 14662]
gi|167654488|gb|EDR98617.1| hypothetical protein ANACAC_00668 [Anaerostipes caccae DSM 14662]
Length = 239
Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + S+ D L + I +G H+D++DG F +++ +R +
Sbjct: 8 ELMVSASVSCMDLCHLADAIEEAEGSGISFFHYDMVDGRFNDCFILSETLLKQMRGITSL 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HL + +I + ADAG D I H E+ R I G + +A TP
Sbjct: 68 PIEAHLAAFEPERYIGMYADAGADYIAVHYEAMKDPLRVFEQIREAGARPVLAYKSTTPP 127
Query: 124 AILEDVI---DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
ED I E IL +TVNPGF GQ++ E + IRQ +A++ + ++ DG +
Sbjct: 128 G--EDFITLAGEAAWILKLTVNPGFSGQKMQEGALGHIRQMRAMLNSAGLKTKIQADGNI 185
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I V+AGAD+L G+S
Sbjct: 186 NQDTIPRAVEAGADILTGGTS 206
>gi|317473344|ref|ZP_07932639.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
gi|316899180|gb|EFV21199.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 239
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + S+ D L + I +G H+D++DG F +++ +R +
Sbjct: 8 ELMVSASVSCMDLCHLADAIEEAEGSGISFFHYDMVDGRFNDCFILSETLLKQMRGITSL 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HL + +I + ADAG D I H E+ R I G + +A TP
Sbjct: 68 PIEAHLAAFEPERYIGMYADAGADYIAVHYEAMKDPLRVFEQIREAGARPVLAYKSTTPP 127
Query: 124 AILEDVI---DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
ED I E IL +TVNPGF GQ++ E + IRQ +A++ + ++ DG +
Sbjct: 128 G--EDFITLAGEAAWILKLTVNPGFSGQKMQEGALGHIRQMRAMLNSAGLKTKIQADGNI 185
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I V+AGAD+L G+S
Sbjct: 186 NQDTIPRAVEAGADILTGGTS 206
>gi|209547488|ref|YP_002279406.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538732|gb|ACI58666.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 233
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD RL +++ + +H DV DG F P + F D++ +R S HL
Sbjct: 22 SVWSADLMRLADDLGRVDPY-VDILHIDVADGHFAPAMLFFPDLVAGVRKVSTRPIHVHL 80
Query: 70 MI--SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ S I S I ADAG D+I+ H E+ +L + G G+ + +TPV +E
Sbjct: 81 MVADSIILSQIEQFADAGSDLISLHVENESVANEALDLLDRRGVAAGMVLKVDTPVERIE 140
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI----GKRSISLEVDGGVTSRNI 183
+ + ++ G GQ L E +++QAK +I I L DGG+ +
Sbjct: 141 TYASRLRFVTLLGTAIGVKGQGLDEKAGARLQQAKRIIAGCGAADRIVLAADGGIREHTV 200
Query: 184 KSLVQAGADLLVVGSSFFN 202
L Q+GA+ +V+GS FN
Sbjct: 201 PLLRQSGAETVVLGSLAFN 219
>gi|312601114|gb|ADQ90369.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 168]
Length = 179
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 100/180 (55%), Gaps = 5/180 (2%)
Query: 39 MDGCFVPNISFGADVIRSL-RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
MDG FV N++ I+++ + + + D HLM + + I + + T H ES
Sbjct: 1 MDGIFVKNVAISIPEIKNIIKKSKEFISDVHLMSVNPEEQIKQLL-GYVNFATIHFESRN 59
Query: 98 HIR-RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
+ + + + + ++ K G+AI PET + + D++ EI ++LIM+V PG GGQ IE+T
Sbjct: 60 YAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYK 119
Query: 157 KIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
KI + +I + + I ++VDGG+ N K + +GAD++VVG+ + ++ K +N
Sbjct: 120 KIEELSKIIQENNYKIIIQVDGGIKDFNSKRVFDSGADVIVVGTFLAEKPTKLKIKKLIN 179
>gi|313616821|gb|EFR89524.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL S4-378]
Length = 119
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
++ I A G K GV +NP TP +L+ ++ ++D++L MTVNPGFGGQ I+STI +R
Sbjct: 5 IQQIKAAGCKAGVVLNPGTPANVLDAILGDVDLVLQMTVNPGFGGQSFIDSTIENMRYLD 64
Query: 163 ALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ S +EVDGGV + + QAG D+LV GS FF +++ + L
Sbjct: 65 NWRRENNGSYVIEVDGGVNAETAEKCKQAGVDILVAGSYFFGADDKVACVQGL 117
>gi|74005313|ref|XP_861291.1| PREDICTED: similar to Ribulose-phosphate 3-epimerase
(Ribulose-5-phosphate-3-epimerase) (HUSSY-17) isoform 4
[Canis familiaris]
Length = 183
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 93/201 (46%), Gaps = 49/201 (24%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEAT---------------------- 98
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
E P A+++D I E M + + + P S+ +EVDGGV
Sbjct: 99 -ENPGALIKD-IRENGMKV-----------HWLRTQFP------------SLDIEVDGGV 133
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
I +AGA+++V GS+
Sbjct: 134 GPDTIHKCAEAGANMIVSGSA 154
>gi|309776703|ref|ZP_07671677.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308915451|gb|EFP61217.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 217
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ D L + I+ I + +H+DV+DGCF FG ++ LR + + HL
Sbjct: 4 SLSCCDLLHLADAIAEINASDIDFVHYDVVDGCFNNCFVFGDLMLEKLRPICEKPIEVHL 63
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
+ + +I A AG D I H E + + I G + +A+ +T V +D
Sbjct: 64 AVEHVRPYIEPFARAGADYIAVHYEIADDLEEIFALIRQAGCRPILAMRSDTEVP--QDF 121
Query: 130 I---DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++D IL + V PG+ GQ + + IR K I K S+ ++ DG + + I
Sbjct: 122 VKLASQVDWILKLMVQPGYAGQTMQPDALRHIRTMKEEILKHQLSVRIQADGNIHAGTIP 181
Query: 185 SLVQAGADLLVVGSSFFNQKG 205
+ +AGAD+L G+S +KG
Sbjct: 182 LVTEAGADILTGGTSGLFRKG 202
>gi|167747941|ref|ZP_02420068.1| hypothetical protein ANACAC_02671 [Anaerostipes caccae DSM 14662]
gi|167652672|gb|EDR96801.1| hypothetical protein ANACAC_02671 [Anaerostipes caccae DSM 14662]
Length = 219
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D L E+I ++G H+D++DG F G ++ +RS + HL +
Sbjct: 2 DLLHLKEQIVETEQSGISFFHYDMVDGKFNKCFILGDTLLEMMRSEVTLPIEAHLAAYNP 61
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET-PVAILEDVIDEI 133
D++I A G D I H E+ H ++ I G + +A +T P + E+
Sbjct: 62 DAYIERFAKLGADYIAVHYEAMEHPLKTFDLIRKFGAQPVLAFKCDTAPPDDFLALAKEV 121
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGA 191
IL +TVNPGF GQ + ++++ I++ + + + S+S++ DG V + +L QAGA
Sbjct: 122 PWILKLTVNPGFSGQTMQQNSLGHIKEMRHRLSEAGMSVSIQADGNVNPSTVNTLYQAGA 181
Query: 192 DLLVVGSS 199
D+ G+S
Sbjct: 182 DIFTGGTS 189
>gi|213616012|ref|ZP_03371838.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 99
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 29 AGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCD 87
AGA +HFDVMD +VPN++ G V++SLR Y + D HLM+ +D + A AG
Sbjct: 3 AGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAGAS 62
Query: 88 IITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
IITFHPE+S H+ R+L+ I G K G+ NP T
Sbjct: 63 IITFHPEASEHVDRTLQLIKEHGCKAGLVFNPAT 96
>gi|326627771|gb|EGE34114.1| epimerase [Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 214
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 2/202 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ +
Sbjct: 1 MEVSMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q + + DG +T
Sbjct: 121 TPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHFP--AAECWADGSITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
R + L AGA LV+G + F
Sbjct: 179 RAARLLAAAGAQHLVIGRALFT 200
>gi|213029389|ref|ZP_03343836.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 169
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS H
Sbjct: 9 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHPLSFH 68
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 69 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 128
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
+ ++D ++IMT P GQQ I + K+ Q++
Sbjct: 129 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSR 162
>gi|205352703|ref|YP_002226504.1| epimerase [Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|205272484|emb|CAR37373.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
Length = 210
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ ++D ++IMT P GQQ I + K+ Q + + DG +T R + L
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHFP--AAECWADGSITLRAARLLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA LV+G + F
Sbjct: 183 AGAQHLVIGRALFT 196
>gi|260459932|ref|ZP_05808185.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
gi|259034143|gb|EEW35401.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
Length = 240
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 20/223 (8%)
Query: 14 ADFSRLGEEISNITKAGAKQI-------HFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
A+FS +++NI ++ ++I H DV DG F P+ F D++ + +
Sbjct: 22 AEFSSWSADLANI-ESDLRRIEPYVDLHHVDVADGHFAPSFLFFPDLVARIAKLTAKPIH 80
Query: 67 CHLMISS--IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+ + +++ +AG D+I+ H E+ R++R +G + GV + ETPV
Sbjct: 81 VHLMVDAGIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVE 140
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK----RSISLEVDGGVTS 180
+ + EI + ++ G GQ L E ++R A+A++ K ++ L DGG+
Sbjct: 141 AVTPFVSEIAFVTLLGTAIGVKGQSLSEKACDRLRAARAILRKAGREAAVVLAADGGIRH 200
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSA 220
L AGA+ +V+GS F K G I++ L+ LK +A
Sbjct: 201 ETGPLLRAAGAETVVLGSLAFGDKDLAGRIAW---LHGLKVAA 240
>gi|114632630|ref|XP_001172562.1| PREDICTED: similar to rcRPE isoform 1 [Pan troglodytes]
Length = 160
Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
H+M+S + + +A A + TFH E++ + ++ I G K G+AI P T V L
Sbjct: 2 HMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIKPGTSVEYLA 61
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
++IDM L+MTV PGFG Q+ +E +PK+ + S+ +E DGGV S +
Sbjct: 62 PWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQF--PSLDIEGDGGVGSDTVHKCA 119
Query: 188 QAGADLLVVGSSFF 201
+AGA+++V GS+
Sbjct: 120 EAGANMIVSGSAIM 133
>gi|323720072|gb|EGB29178.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
CDC1551A]
Length = 186
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 10 IAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
CHLMI + D A+AG +TFH E++ + R I A G ++
Sbjct: 68 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGGQS 114
>gi|241113559|ref|YP_002973394.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240861767|gb|ACS59433.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 233
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD L ++++ + +H DV DG F P + F D++ +R S HL
Sbjct: 22 SVWSADLVHLADDLARVDP-HVDILHIDVADGHFAPAMLFFPDLVAGVRKVSARPIHVHL 80
Query: 70 MI--SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ S + S I ADAG D+I+ H E+ +L + G G+ + +TPV +E
Sbjct: 81 MVADSILLSQIEQFADAGSDLISLHVENESVAVEALDLLDRRGVAAGMVLKVDTPVERVE 140
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI----GKRSISLEVDGGVTSRNI 183
+ + ++ G GQ L E +++QAK +I I L DGG+ +
Sbjct: 141 RYASRLRFVTLLGTAIGVKGQGLDEKAGARLQQAKQIIAGCGAAHRIVLAADGGIREHTV 200
Query: 184 KSLVQAGADLLVVGSSFFN 202
L Q+GA+ +V+GS FN
Sbjct: 201 PLLRQSGAETVVLGSLAFN 219
>gi|225352138|ref|ZP_03743161.1| hypothetical protein BIFPSEUDO_03753 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157385|gb|EEG70724.1| hypothetical protein BIFPSEUDO_03753 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 117
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
MG K A+ P PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R
Sbjct: 1 MGCKACFAVRPAEPVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRR 60
Query: 169 SIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
++ ++VDGGV+ + + +AGAD+LV GS+ + +
Sbjct: 61 GLATKIQVDGGVSPKTAHIVAEAGADVLVAGSAVYGAE 98
>gi|47226986|emb|CAG05878.1| unnamed protein product [Tetraodon nigroviridis]
Length = 183
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 49/201 (24%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL++D S LG E + + GA +H DVMDG FVPNI+FG ++ LR
Sbjct: 1 MAYNAKIGPSILSSDLSCLGSECVRMMECGADYLHLDVMDGHFVPNITFGHPMVECLRKS 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I K++G+ ++
Sbjct: 61 VGQDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLEATTNPGNLIKDI----KESGMKVS 116
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ S P S+ +EVDGGV
Sbjct: 117 -------------------------------WLRSQFP------------SLDIEVDGGV 133
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ +AGA+++V GS+
Sbjct: 134 GPDTVHKCAEAGANMIVSGSA 154
>gi|218259989|ref|ZP_03475474.1| hypothetical protein PRABACTJOHN_01135 [Parabacteroides johnsonii
DSM 18315]
gi|218224809|gb|EEC97459.1| hypothetical protein PRABACTJOHN_01135 [Parabacteroides johnsonii
DSM 18315]
Length = 149
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 61/113 (53%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LAADF L E+ I ++ A +H D+MDG FVPNISFG V+ +L+
Sbjct: 4 KIAPSLLAADFLNLQREVEMINESDADWLHLDIMDGVFVPNISFGFPVLEALKPICKKPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D HLMI I +A G ++ H E+ H+ R++ I G K G I
Sbjct: 64 DVHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKEAGMKGGCYIE 116
>gi|240273443|gb|EER36963.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus H143]
gi|325087342|gb|EGC40652.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus H88]
Length = 147
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 8/108 (7%)
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQLIESTIP 156
+R IH G + G+AI P+TPV +L D++ D DM+L+MTV+PGFGGQ+ + S +P
Sbjct: 24 IRYIHENGMQAGIAIKPDTPVDVLWDILEQDDPLDRPDMVLVMTVHPGFGGQKFMASELP 83
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
K+ + + +++EVDGG+ ++ AGA+++V GS+ F +
Sbjct: 84 KVNALR--VKYPHLNIEVDGGLGEDTVEQAADAGANVIVAGSAVFGAQ 129
>gi|313900977|ref|ZP_07834467.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312954397|gb|EFR36075.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 239
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 7/203 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ D + E + I ++ K +H+D++DG F FG +++ RSY+
Sbjct: 7 TTEFSFNASLSCIDLGHIAESMEEINQSRIKSLHYDMVDGQFNECFIFGDLMLKVFRSYT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
HL + +I G D I H E+ I ++ +T+ G K +A +T
Sbjct: 67 KLPITVHLACRNPIPYIKPCIANGADYIAIHYEADIDIEKAFQTVREFGAKPVLAFRCDT 126
Query: 122 PVAILEDVI---DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
PV ED I + + IL + V PGF GQ E + I + L+ + +EVDG
Sbjct: 127 PVP--EDFIKVSEHAEWILKLCVQPGFSGQTFQEEAVRHIEKMHQLLMTAGLDRVIEVDG 184
Query: 177 GVTSRNIKSLVQAGADLLVVGSS 199
+ + I+ +AGA + G+S
Sbjct: 185 NIHTGTIQKCAKAGATMFTGGTS 207
>gi|213648806|ref|ZP_03378859.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 149
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIES 153
+ ++D ++IMT P GQQ I +
Sbjct: 125 LALQLDALMIMTSEPDGRGQQFIAA 149
>gi|24307923|ref|NP_008847.1| ribulose-phosphate 3-epimerase isoform 2 [Homo sapiens]
gi|114583057|ref|XP_001145634.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 4 [Pan
troglodytes]
gi|114583059|ref|XP_001145475.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 2 [Pan
troglodytes]
gi|114583061|ref|XP_001145546.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 3 [Pan
troglodytes]
gi|16550907|dbj|BAB71076.1| unnamed protein product [Homo sapiens]
gi|62702161|gb|AAX93087.1| unknown [Homo sapiens]
gi|119590879|gb|EAW70473.1| ribulose-5-phosphate-3-epimerase, isoform CRA_b [Homo sapiens]
Length = 178
Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 20/152 (13%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT-------------- 113
H+M+S + + +A AG + TFH E++ + ++ I G K+
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 114 ----GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PS 119
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ +EVDGGV + +AGA+++V GS+
Sbjct: 120 LDIEVDGGVGPDTVHKCAEAGANMIVSGSAIM 151
>gi|13476026|ref|NP_107596.1| ribulose-5-phosphate 3-epimerase [Mesorhizobium loti MAFF303099]
gi|14026786|dbj|BAB53382.1| ribulose-5-phosphate 3-epimerase [Mesorhizobium loti MAFF303099]
Length = 240
Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 35 HFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS--IDSHINIIADAGCDIITFH 92
H DV DG F P+ F D++ + + HLM+ + +++ +AG D+I+ H
Sbjct: 49 HIDVADGHFAPSFLFFPDLVARIAGLTAKPIHVHLMVDAAIVEAQTRQFIEAGADMISVH 108
Query: 93 PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
E+ R++R +G + GV + ETPV ++ + E+ + ++ G GQ L +
Sbjct: 109 AENGEAGLRAVRLARELGAEAGVVLRLETPVEAVKPFVSEVAFVTLLGTAIGVKGQSLSD 168
Query: 153 STIPKIRQAKALI---GKRS-ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK---G 205
++ A+A++ G+ + ++L DGG+ + L AGA+ +V+GS F K G
Sbjct: 169 KACDRLGAARAILRGAGREAEVALAADGGIRHETVPLLRAAGAETVVLGSLAFGDKDLAG 228
Query: 206 EISYAKRLNDLKKSA 220
I + L+ LK +A
Sbjct: 229 RIGW---LHGLKVAA 240
>gi|110589048|gb|ABG77033.1| pentose-5-phosphate-3-epimerase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 123
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEV 174
NP TP++ L+ V+D++DMIL+M+VNPGFGGQ I +T+ K+R + LI I LE+
Sbjct: 12 FNPVTPLSHLDYVLDKVDMILLMSVNPGFGGQSFIPATLDKLRACRKLIDDSGLDIRLEI 71
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFF 201
DGGV NI + AGAD V GS F
Sbjct: 72 DGGVKVDNIAEIKAAGADTFVAGSGIF 98
>gi|255030827|ref|ZP_05302778.1| hypothetical protein LmonL_20056 [Listeria monocytogenes LO28]
Length = 170
Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
Query: 57 LRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
+++ + + D HL + D +++ A ++FH E+S + ++ I +G + +A
Sbjct: 2 IKNNTKMLLDIHLATVNPDKFVDLYAAIKPAYMSFHLEASRDVNATINHIRELGIRPSIA 61
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
I+P+T + + + ++DM+L+MTVNPGF GQ+ + KI++ + + + +EV
Sbjct: 62 ISPDTEIEQIYPFLGKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEV 121
Query: 175 DGGVTSRNIKSLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKK 218
DG ++ L GAD+ VVG+ + FN+K SY ++L L++
Sbjct: 122 DGNXFEETVRLLEPIGADVYVVGTAALFNEKAG-SYTEKLAPLRE 165
>gi|291550749|emb|CBL27011.1| Pentose-5-phosphate-3-epimerase [Ruminococcus torques L2-14]
Length = 230
Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+ D ++ I + A +H D+ DG +V G + + L+ D
Sbjct: 9 LAPSMGCCDLYDFEHQVRFIDEH-ADFLHIDIKDGNYVKTFGVGPEFMTVLKKVVKKPMD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHP---ESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
HLM+ +I A+AG IT H ES + ++ I ++G K G+A+NP P+
Sbjct: 68 AHLMVKHPQDYIEACAEAGAAYITPHTDCIESDAFV--TINKIISLGCKAGIALNPAAPL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR---QAKALIGKRSISLEVDGGVTS 180
+ + + + IM V+ G+ GQ++I KIR Q + +G +E DG + +
Sbjct: 126 EGIRHYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLVQWREEMG-LDFLIEADGSMNA 184
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYA 210
L +AGAD++V+G + +N+ EIS A
Sbjct: 185 GVYAPLYEAGADMVVLGPPALWNKDPEISKA 215
>gi|21752577|dbj|BAC04212.1| unnamed protein product [Homo sapiens]
Length = 178
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 20/152 (13%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT-------------- 113
H+M+S + + +A AG + TFH E++ + ++ I G K+
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 114 ----GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PS 119
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ +EVDGGV + +AGA+++V GS+
Sbjct: 120 LDIEVDGGVGLDTVHKCAEAGANMIVSGSAIM 151
>gi|325262777|ref|ZP_08129513.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
gi|324031871|gb|EGB93150.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
Length = 225
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ D ++ I + A +H D+ DG +V + G D + L
Sbjct: 1 MEKKLLLAPSMGCCDLYDFEHQVRYIDEK-ADFLHIDIKDGNYVKSFGVGPDFMTVLAKV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHP---ESSPHIRRSLRTIHAMGKKTGVAI 117
+ D HLM+ +I A AG IT H ES + ++ I ++G K G+A+
Sbjct: 60 VQTPMDAHLMVKHPQDYIEACAQAGAAYITPHTDCIESDAFV--TINKILSLGCKAGIAM 117
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR---QAKALIGKRSISLEV 174
NP P+ + + + + IM V+ G+ GQ++I KIR + +A +G +E
Sbjct: 118 NPAAPLEAIRHYLPLLSKVTIMIVDAGYAGQKVIVQMYDKIRTLVKWRAEMG-LDFLIEA 176
Query: 175 DGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
DG + + L +AGAD++V+G + +N+ +I A +
Sbjct: 177 DGSMNADVYGPLYEAGADVVVLGPPALWNKDTDIEKAWEI 216
>gi|313900365|ref|ZP_07833859.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312954914|gb|EFR36588.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 228
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + S+ AD + + ++ I + +H+DV+DG F FG ++ +R D
Sbjct: 10 ILVSASLSCADLLHVSDAVAQINASDIDFVHYDVVDGMFNNCFVFGDLILEKIRPICDKP 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV- 123
+ HL + ++ +I A AG D I H E + I + G + +A+ +T V
Sbjct: 70 IEVHLAVQNVRPYIEPFARAGADYIAVHYEIDDDLEDIFAHIRSAGCRPVLAMQCDTEVP 129
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ + ++D IL + V PG+ GQ + + IR K I +S ++ DG + +
Sbjct: 130 SDFVKLASQVDWILKLMVQPGYAGQHMQREAVEHIRSMKEQITANCLSCRIQADGNIHTG 189
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRLNDLKKSA 220
I + AGA +L G+S F Q ++ + L +K++A
Sbjct: 190 TIPQVCAAGASILTGGTSGLFRQDADLQ--ENLRRMKEAA 227
>gi|317473557|ref|ZP_07932847.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
gi|316898959|gb|EFV20983.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 210
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
H+D++DG F G ++ +RS + HL + D++I A G D I H
Sbjct: 12 FHYDMVDGKFNKCFILGDTLLEMMRSEVTLPIEAHLAAYNPDAYIERFAKLGADYIAVHY 71
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAINPET-PVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
E+ H ++ I G + +A +T P + E+ IL +TVNPGF GQ + +
Sbjct: 72 EAMEHPLKTFDLIRKFGAQPVLAFKCDTAPPDDFLALAKEVPWILKLTVNPGFSGQTMQQ 131
Query: 153 STIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+++ I++ + + + S+S++ DG V + +L QAGAD+ G+S
Sbjct: 132 NSLGHIKEMRHRLSEAGMSVSIQADGNVNPSTVNTLYQAGADIFTGGTS 180
>gi|12044964|ref|NP_072774.1| ribulose-phosphate 3-epimerase [Mycoplasma genitalium G37]
gi|255660133|ref|ZP_05405542.1| ribulose-phosphate 3-epimerase [Mycoplasma genitalium G37]
gi|1351490|sp|P47358|RPE_MYCGE RecName: Full=Probable ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|3844701|gb|AAC71330.1| ribulose-phosphate 3-epimerase [Mycoplasma genitalium G37]
gi|166078926|gb|ABY79544.1| ribulose-phosphate 3-epimerase [synthetic Mycoplasma genitalium
JCVI-1.0]
Length = 209
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI-IADAGCDI 88
G + IH+DVMD FV N +F + + L++ V + HLM+ I IN ++
Sbjct: 28 GLRLIHYDVMD-QFVHNTAFKGEYLDELKTIGFDV-NVHLMVEQIIPQINFYLSQPNVKR 85
Query: 89 ITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
I+FH P S I+ ++ + GK+ G+A T + + + ID I +M+V PG G
Sbjct: 86 ISFHVEPFSFAKIKELIQLVKENGKEVGLAFKFTTNLQLYQPFFTTIDFITLMSVPPGKG 145
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
GQ E+ ++ A ++ +E+DGG+ NI ++A D +V+GS F
Sbjct: 146 GQAFNEAVFTNLKIA----NHYNLKIEIDGGIKVNNIDQ-IKAFVDFIVMGSGF 194
>gi|283834395|ref|ZP_06354136.1| protein SgcE [Citrobacter youngae ATCC 29220]
gi|291069937|gb|EFE08046.1| protein SgcE [Citrobacter youngae ATCC 29220]
Length = 210
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +A+ G E++ + G +H D+ D F+ NI+FG ++++ + H
Sbjct: 5 PSLASANPLHYGRELTALDNLGFGTLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M++ N +A+ I H E+ + +L I G + G+A NP TP+
Sbjct: 65 FMVARPQLWFNALAEIRPAWIFVHAETLDYPSETLAEIRHTGARAGLAFNPATPIDAWRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ E+D +++MT P Q+ I S KIR+ + + DGG+T + L
Sbjct: 125 LAPELDGLMVMTSEPDGQEQRFIPSMCEKIRKVRTAFPQ--TECWADGGITLVAAQQLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA +V+G + F+
Sbjct: 183 AGAQHMVIGRALFS 196
>gi|170782612|ref|YP_001710946.1| putative sugar-phosphate epimerase [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157182|emb|CAQ02363.1| putative sugar-phosphate epimerase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 230
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S++ + + L E++ I G ++H D++D F N+ + IR L D H+
Sbjct: 11 SVVCINQTHLWRELTAIRSLGVSRLHIDIIDPSF-GNLGMAPESIRDLSDDLRMPVDVHV 69
Query: 70 MISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP-ETPVAILE 127
M++ + + D G I H +P LR G + G+ ++ E+P L
Sbjct: 70 MVAEPSLLVPKLVDRGAQAILVHQRHVTPEALEVLRAATVGGTEVGLVLDASESPRDWLI 129
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI-SLEVDGGVTSRNIKSL 186
D++ +++M V PG G+ + +R A GK S+ S+EVDG V+S I L
Sbjct: 130 DIV-RPQRLVVMAVTPGGAGRPFRREALDTVRMAAEFRGKSSVESVEVDGAVSSITIGKL 188
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V AGAD V+GSS F + ++ A R L ++A A D
Sbjct: 189 VDAGADSFVLGSSVFPDR--VARADRFLPLLEAAGAAD 224
>gi|331695105|ref|YP_004331344.1| Ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326949794|gb|AEA23491.1| Ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
Length = 240
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + LG E++ +T A H D D FVP+ F D++ +LRS++ F H+
Sbjct: 18 SLWSADLADLGAEVARLTPY-ADVFHIDASDTRFVPSPLFFPDLVAALRSHTQVPFHVHV 76
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M + A AG D+++ H E+ + +L+ I G G+A+ +TPV +E
Sbjct: 77 MAEHALPLVEDFARAGVDLLSVHAEAD-DVADALQAIRTRGGAAGLALRLDTPVDTVEAH 135
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSRNIK-- 184
+D+ID ++++ G G + + ++RQ +AL G+ + + DGG+ +
Sbjct: 136 LDDIDFVVLIGTPLGTKGTTMDPAAPDRVRQLRALAARTGQDQLPVIADGGIRENTVPEL 195
Query: 185 -----------SLVQAGADLLVVGSSFFNQKGEISY 209
SL+ DL + Q+ ++++
Sbjct: 196 ADAGADAVVAGSLLLGSDDLAATTTWLHRQRSDVAF 231
>gi|74005309|ref|XP_861232.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase isoform 3
[Canis familiaris]
Length = 119
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
D FD H+M+S + + +A AG + TFH E++ + ++ I G K
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMK 114
>gi|148767469|gb|ABR10706.1| probable ribulose-5-phosphate 3-epimerase [Mesorhizobium sp. CJ1]
Length = 218
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 35 HFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS--IDSHINIIADAGCDIITFH 92
H DV DG F P+ F D++ + + HLM+ +++ +AG D+I+ H
Sbjct: 27 HIDVADGHFAPSFLFFPDLVARIAGLTAKPIHVHLMVDDAIVEAQTRQFIEAGADMISVH 86
Query: 93 PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
E+ R++R +G + GV + ETPV + + E+ + ++ G GQ L E
Sbjct: 87 AENGEAGLRAVRLARELGAEAGVVLRLETPVEAVTPFVSEVAFVTLLGTAIGVKGQSLSE 146
Query: 153 STIPKIRQAKALIGKRS----ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
++ A+A++ + + L DGG+ + L AGA+ +V+GS F K
Sbjct: 147 KACDRLGAARAILREAGCEADVVLAADGGIRHETVPLLRAAGAETVVLGSLAFGDKDLAG 206
Query: 209 YAKRLNDLKKSA 220
L+ LK +A
Sbjct: 207 RIGWLHGLKVAA 218
>gi|237704035|ref|ZP_04534516.1| sgcE [Escherichia sp. 3_2_53FAA]
gi|309798097|ref|ZP_07692470.1| epimerase [Escherichia coli MS 145-7]
gi|226901947|gb|EEH88206.1| sgcE [Escherichia sp. 3_2_53FAA]
gi|281181443|dbj|BAI57773.1| putative ribulose-phosphate 3-epimerase [Escherichia coli SE15]
gi|308118305|gb|EFO55567.1| epimerase [Escherichia coli MS 145-7]
gi|315286870|gb|EFU46287.1| epimerase [Escherichia coli MS 110-3]
gi|323955366|gb|EGB51136.1| ribulose-phosphate 3 epimerase [Escherichia coli H263]
Length = 210
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +A+ G E++ + +H D+ D F+ NI+FG ++++ + H
Sbjct: 5 PSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M++ N +A+ I H E+ + +L I G + G+ NP TP+
Sbjct: 65 FMVARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGARAGLVFNPATPIDAWRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ E+D +++MT P GQ+ I S KI++ + + DGG+T + L
Sbjct: 125 LASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQ--TECWADGGITLAAAQQLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA +V+G + F+
Sbjct: 183 AGAQHMVIGRALFS 196
>gi|16132122|ref|NP_418721.1| KpLE2 phage-like element; predicted epimerase [Escherichia coli
str. K-12 substr. MG1655]
gi|89111011|ref|AP_004791.1| predicted epimerase [Escherichia coli str. K-12 substr. W3110]
gi|170083735|ref|YP_001733055.1| KpLE2 phage-like element; epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|218561473|ref|YP_002394386.1| epimerase [Escherichia coli S88]
gi|218707961|ref|YP_002415480.1| epimerase [Escherichia coli UMN026]
gi|238903393|ref|YP_002929189.1| KpLE2 phage-like element; putative epimerase [Escherichia coli
BW2952]
gi|253775084|ref|YP_003037915.1| epimerase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254164220|ref|YP_003047330.1| epimerase [Escherichia coli B str. REL606]
gi|293402956|ref|ZP_06647053.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1412]
gi|297519806|ref|ZP_06938192.1| epimerase [Escherichia coli OP50]
gi|298378482|ref|ZP_06988366.1| sgcE [Escherichia coli FVEC1302]
gi|300900341|ref|ZP_07118518.1| epimerase [Escherichia coli MS 198-1]
gi|301019672|ref|ZP_07183829.1| epimerase [Escherichia coli MS 196-1]
gi|301646543|ref|ZP_07246416.1| epimerase [Escherichia coli MS 146-1]
gi|312969974|ref|ZP_07784156.1| protein sgcE [Escherichia coli 1827-70]
gi|331650770|ref|ZP_08351798.1| protein SgcE [Escherichia coli M718]
gi|732069|sp|P39362|SGCE_ECOLI RecName: Full=Protein sgcE
gi|537142|gb|AAA97197.1| ORF_f210 [Escherichia coli str. K-12 substr. MG1655]
gi|1790754|gb|AAC77257.1| KpLE2 phage-like element; predicted epimerase [Escherichia coli
str. K-12 substr. MG1655]
gi|85677042|dbj|BAE78292.1| predicted epimerase [Escherichia coli str. K12 substr. W3110]
gi|169891570|gb|ACB05277.1| KpLE2 phage-like element; predicted epimerase [Escherichia coli
str. K-12 substr. DH10B]
gi|218368242|emb|CAR06058.1| putative epimerase; KpLE2 phage-like element [Escherichia coli S88]
gi|218435058|emb|CAR16011.1| putative epimerase; KpLE2 phage-like element [Escherichia coli
UMN026]
gi|238861604|gb|ACR63602.1| KpLE2 phage-like element; predicted epimerase [Escherichia coli
BW2952]
gi|242379815|emb|CAQ34645.1| predicted epimerase [Escherichia coli BL21(DE3)]
gi|253326128|gb|ACT30730.1| Ribulose-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253976123|gb|ACT41794.1| ribulose-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|253980279|gb|ACT45949.1| ribulose-phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|260450886|gb|ACX41308.1| Ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|291429871|gb|EFF02885.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1412]
gi|298280816|gb|EFI22317.1| sgcE [Escherichia coli FVEC1302]
gi|299882133|gb|EFI90344.1| epimerase [Escherichia coli MS 196-1]
gi|300356140|gb|EFJ72010.1| epimerase [Escherichia coli MS 198-1]
gi|301075248|gb|EFK90054.1| epimerase [Escherichia coli MS 146-1]
gi|310337472|gb|EFQ02583.1| protein sgcE [Escherichia coli 1827-70]
gi|315138855|dbj|BAJ46014.1| ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|323945900|gb|EGB41944.1| ribulose-phosphate 3 epimerase [Escherichia coli H120]
gi|323950612|gb|EGB46490.1| ribulose-phosphate 3 epimerase [Escherichia coli H252]
gi|331051224|gb|EGI23273.1| protein SgcE [Escherichia coli M718]
Length = 210
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 2/194 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +A+ G E++ + +H D+ D F+ NI+FG ++++ + H
Sbjct: 5 PSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M++ N +A+ I H E+ + +L I G + G+ NP TP+
Sbjct: 65 FMLARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGARAGLVFNPATPIDAWRY 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ E+D +++MT P GQ+ I S KI++ + + DGG+T + L
Sbjct: 125 LASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQ--TECWADGGITLAAAQQLAA 182
Query: 189 AGADLLVVGSSFFN 202
AGA +V+G + F+
Sbjct: 183 AGAQHMVIGRALFS 196
>gi|238927311|ref|ZP_04659071.1| possible ribulose-phosphate 3-epimerase [Selenomonas flueggei ATCC
43531]
gi|238884593|gb|EEQ48231.1| possible ribulose-phosphate 3-epimerase [Selenomonas flueggei ATCC
43531]
Length = 212
Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D L + I + ++ H+DV+DG F + G + L+ S + HL +
Sbjct: 2 DIGHLSDAIDKVNRSDVAFWHYDVVDGVFNQCLILGDLLYPYLKEKSRLPIEIHLAVEQP 61
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID--- 131
+ +I+I + D I H E+ R R I G +A ETP ED +D
Sbjct: 62 ERYIDIFSRYKLDYIAVHAETMNEPERVFRRIRECGALPVLAYRAETPPG--EDFVDLAK 119
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQA-----KALIGKRSISLEVDGGVTSRNIKSL 186
+ +L +TVNPGF GQ++ ++ + IR+ A IG R ++ DG V + + +L
Sbjct: 120 KCAWVLKLTVNPGFSGQKIQDAAVRHIREMSDRLIHAGIGCR---IQADGNVNEKTVHTL 176
Query: 187 VQAGADLLVVGSS 199
+AGA + GSS
Sbjct: 177 YEAGARIFTGGSS 189
>gi|13507990|ref|NP_109939.1| ribulose-phosphate 3-epimerase [Mycoplasma pneumoniae M129]
gi|2499727|sp|P75522|RPE_MYCPN RecName: Full=Probable ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|1674282|gb|AAB96229.1| D-ribulose-5-phosphate 3 epimerase [Mycoplasma pneumoniae M129]
Length = 215
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI-IADAGCDI 88
G + IH+DVMD FV N F + + L+ V + HLM+ +++ + + +
Sbjct: 33 GLRLIHYDVMDH-FVDNTVFQGEHLDELQQIGFQV-NVHLMVQALEQILPVYLHHQAVKR 90
Query: 89 ITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
I+FH P P I+ + I GK+ G+A TP+ E ++ ++D + +M+V PG G
Sbjct: 91 ISFHVEPFDIPTIKHFIAQIKQAGKQVGLAFKFTTPLVNYERLVQQLDFVTLMSVPPGKG 150
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
GQ + ++QA K S+E+DGG+ NI +Q + +V+GS F
Sbjct: 151 GQAFNSAVFNNLKQAH----KYHCSIEIDGGIKLDNIHQ-IQDDVNFIVMGSGF 199
>gi|301633387|gb|ADK86941.1| putative ribulose-phosphate 3-epimerase [Mycoplasma pneumoniae FH]
Length = 210
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI-IADAGCDI 88
G + IH+DVMD FV N F + + L+ V + HLM+ +++ + + +
Sbjct: 28 GLRLIHYDVMDH-FVDNTVFQGEHLDELQQIGFQV-NVHLMVQALEQILPVYLHHQAVKR 85
Query: 89 ITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
I+FH P P I+ + I GK+ G+A TP+ E ++ ++D + +M+V PG G
Sbjct: 86 ISFHVEPFDIPTIKHFIAQIKQAGKQVGLAFKFTTPLVNYERLVQQLDFVTLMSVPPGKG 145
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
GQ + ++QA K S+E+DGG+ NI +Q + +V+GS F
Sbjct: 146 GQAFNSAVFNNLKQAH----KYHCSIEIDGGIKLDNIHQ-IQDDVNFIVMGSGF 194
>gi|15603145|ref|NP_246217.1| ribulose-phosphate 3-epimerase [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12721640|gb|AAK03364.1| Dod [Pasteurella multocida subsp. multocida str. Pm70]
Length = 229
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA+D+ + + ++ +++ + +HFD+ DG F P + GA ++ S + D HLM
Sbjct: 19 ILASDWLKFADTLTTLSRHHLRLLHFDIGDGQFSPFFTVGALAVKQFP--SPWLKDVHLM 76
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI--HAMGKKTGVAINPETPVAILED 128
++ ADAG DIIT E + + ++ + H G+ + P+T + +L
Sbjct: 77 VNDPFHVAKACADAGADIITLQVEQTDCLAETISYLREHYPDLLIGLTLCPDTEIDLLTP 136
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
+ ++D+I I+T++P G + ++ I +I + ++G+ + VDG + L
Sbjct: 137 YLAQVDLIQILTLDPRTGVKAETDAVIKRITRISNMLGEHRDQKLISVDGSMNLALASQL 196
Query: 187 VQAGADLLVVGSSFFNQ 203
G D +V GS+ F+Q
Sbjct: 197 FPLGIDWVVSGSALFSQ 213
>gi|65321186|ref|ZP_00394145.1| COG0036: Pentose-5-phosphate-3-epimerase [Bacillus anthracis str.
A2012]
Length = 83
Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGAD 192
M+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R+ + +EVDGGV + + V+AGA+
Sbjct: 1 MVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAETARLCVEAGAN 60
Query: 193 LLVVGSSFFNQK 204
+LV GS+ +NQK
Sbjct: 61 VLVAGSAVYNQK 72
>gi|319784864|ref|YP_004144340.1| Ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170752|gb|ADV14290.1| Ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 240
Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 35 HFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS--IDSHINIIADAGCDIITFH 92
H DV DG F P+ F D++ + + HLM+ +++ +AG D+I+ H
Sbjct: 49 HIDVADGHFAPSFLFFPDLVARIAGLTAKPIHVHLMVDEAIVEAQTRQFIEAGADMISVH 108
Query: 93 PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
E+ R++R +G + GV + ETPV + + E+ + ++ G GQ L +
Sbjct: 109 AENGEAGLRAVRLARELGAEAGVVLRLETPVEAVTAFVPEVAFVTLLGTAIGVKGQSLSD 168
Query: 153 STIPKIRQAKALIGK----RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
++ +A++ K + L DGG+ + L AGA+ +V+GS F K
Sbjct: 169 KACDRLGATRAILRKAGREAQVVLAADGGIRHETVPLLRAAGAETVVLGSLAFGDKDLAG 228
Query: 209 YAKRLNDLKKSA 220
L+ LK +A
Sbjct: 229 RIGWLHGLKVAA 240
>gi|294660573|ref|NP_853417.2| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum str.
R(low)]
gi|284812236|gb|AAP56985.2| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum str.
R(low)]
gi|284930914|gb|ADC30853.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum str.
R(high)]
Length = 215
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 22 EISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINII 81
++++ + G +IH+DVMD FV N +F + +L++ + + HLM++ + +HI +
Sbjct: 19 KLASYKQLGLNKIHYDVMDE-FVNNKAFDERYVDNLKNLGYQI-NVHLMVNKVANHILVY 76
Query: 82 ADAGCDIITFHPE----SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
A CD I+FH E + I + L I KK G+A T V D I +D +
Sbjct: 77 AKTRCDQISFHVEPLANNKQLINKYLAYIKTNNKKAGLAFKFNTDVNDYLDQIKLVDYVT 136
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN---IKSLVQAGADLL 194
+M+V PG GGQ I AK + + +E+DGG+ +K LV
Sbjct: 137 LMSVEPGAGGQAFNPLVYRNI--AKLIKFNPKLEIEIDGGINLEKAIELKGLVSG----F 190
Query: 195 VVGSSFF 201
V GS F+
Sbjct: 191 VSGSYFY 197
>gi|153814593|ref|ZP_01967261.1| hypothetical protein RUMTOR_00807 [Ruminococcus torques ATCC 27756]
gi|145848087|gb|EDK25005.1| hypothetical protein RUMTOR_00807 [Ruminococcus torques ATCC 27756]
Length = 234
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ D G ++ I + A +H D+ DG +V G D + L+
Sbjct: 7 MEKKLMLAPSMGCCDLYDFGHQVKFIDEH-ADFLHIDIKDGNYVKTFGVGPDFMTVLKKV 65
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHP---ESSPHIRRSLRTIHAMGKKTGVAI 117
D HLM+ +I A AG IT H ES + ++ I ++G K G+A+
Sbjct: 66 VKKPMDAHLMVKHPQDYIEACAAAGAAYITPHTDCIESDAFV--TINKIISLGCKAGIAM 123
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
NP P+ + + + + IM V+ G+ GQ++I KIR + + +E D
Sbjct: 124 NPAAPLEAIRYYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLAKWREEMKLDFLIEAD 183
Query: 176 GGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK-KSALA 222
G + + L +AGAD++V+G + +N+ +I A + + + KS LA
Sbjct: 184 GSMNAGVYAPLYEAGADMVVLGPPALWNKDEDIEKAWAIMEQEVKSELA 232
>gi|317501244|ref|ZP_07959449.1| hypothetical protein HMPREF1026_01392 [Lachnospiraceae bacterium
8_1_57FAA]
gi|316897420|gb|EFV19486.1| hypothetical protein HMPREF1026_01392 [Lachnospiraceae bacterium
8_1_57FAA]
Length = 228
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ D G ++ I + A +H D+ DG +V G D + L+
Sbjct: 1 MEKKLMLAPSMGCCDLYDFGHQVKFIDEH-ADFLHIDIKDGNYVKTFGVGPDFMTVLKKV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHP---ESSPHIRRSLRTIHAMGKKTGVAI 117
D HLM+ +I A AG IT H ES + ++ I ++G K G+A+
Sbjct: 60 VKKPMDAHLMVKHPQDYIEACAAAGAAYITPHTDCIESDAFV--TINKIISLGCKAGIAM 117
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
NP P+ + + + + IM V+ G+ GQ++I KIR + + +E D
Sbjct: 118 NPAAPLEAIRYYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLAKWREEMKLDFLIEAD 177
Query: 176 GGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK-KSALA 222
G + + L +AGAD++V+G + +N+ +I A + + + KS LA
Sbjct: 178 GSMNAGVYAPLYEAGADMVVLGPPALWNKDEDIEKAWAIMEQEVKSELA 226
>gi|284931670|gb|ADC31608.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum str. F]
Length = 215
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 22 EISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINII 81
++++ + G +IH+DVMD FV N +F + +L+ + + HLM++ + +HI +
Sbjct: 19 KLASYKQLGLNKIHYDVMDE-FVNNKAFDERYVDNLKDLGYQI-NVHLMVNKVANHILVY 76
Query: 82 ADAGCDIITFHPE----SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
A CD I+FH E + I + L I KK G+A T V D I +D +
Sbjct: 77 AKTRCDQISFHVEPLANNKQLINKYLAYIKTNNKKAGLAFKFNTDVNDYLDQIKLVDYVT 136
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN---IKSLVQAGADLL 194
+M+V PG GGQ I AK + + +E+DGG+ +K LV
Sbjct: 137 LMSVEPGAGGQAFNPLVYRNI--AKLIKFNPKLEIEIDGGINLEKAIELKGLVSG----F 190
Query: 195 VVGSSFF 201
V GS F+
Sbjct: 191 VSGSYFY 197
>gi|222082871|ref|YP_002542236.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
gi|221727550|gb|ACM30639.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
Length = 241
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 35 HFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS--IDSHINIIADAGCDIITFH 92
H DV D F P F D + + + HLM+ + ++ +AG D+I+ H
Sbjct: 49 HIDVADARFTPGFLFFPDFVARIAKSTAKPIHVHLMVEAEIVEEQTRQFIEAGADLISVH 108
Query: 93 PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
E+ R++ +G + GV + ETPV+ ++ I+ + + ++ + G GQ L E
Sbjct: 109 AENGEAGLRAVALAKELGAEAGVVLRLETPVSAIKPFIEHVAFVTLLGTSIGVKGQSLSE 168
Query: 153 STIPKIRQAKALIGKR----SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
++ +A+AL+ + + L DGG+ + + L AGA +V+GS F K
Sbjct: 169 KACGRLIEARALLKQADREDQVILAADGGIREQTVPELRAAGAQTVVLGSLAFGDK 224
>gi|168237706|ref|ZP_02662764.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194733952|ref|YP_002117001.1| epimerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194709454|gb|ACF88675.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289437|gb|EDY28802.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 254
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ +I++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIVPILSDIEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G D +V GS+ F
Sbjct: 204 QEQLPSLIAQGIDRVVSGSALFR 226
>gi|171920957|ref|ZP_02932094.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
13 str. ATCC 33698]
gi|225550844|ref|ZP_03771793.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
gi|171903199|gb|EDT49488.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
13 str. ATCC 33698]
gi|225379998|gb|EEH02360.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
Length = 219
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+VPS+LA D + E++ K + IH+DVMD +V N +F + + L ++ +
Sbjct: 4 QLVPSLLAFDKKQPYEQLKIFQKHHLQTIHYDVMDLAYVNNTAFETEHLEWLLK-NNFLV 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT---GVAINPETP 122
HLM+ + I I+FH E + + + +L I + K + G+AI+P +
Sbjct: 63 HIHLMVINPLQKIKQYFKYKPTHISFHFEMNDY-QTNLLIIDEIKKHSIFAGIAIHPHSS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + E+D I M+V PG GGQ +E ++ K+++ K +++ +E+DGG+T
Sbjct: 122 LNDYAFYLKEVDYITFMSVVPGKGGQLFLEESLLKLQELYDYKIKNNLTFKIEIDGGITL 181
Query: 181 RNIKSLVQAGADLLVVGS 198
IK + D + GS
Sbjct: 182 EIIKK-INIPIDFFISGS 198
>gi|185178885|ref|ZP_02964658.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
5 str. ATCC 27817]
gi|188024027|ref|ZP_02996785.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
7 str. ATCC 27819]
gi|188518279|ref|ZP_03003802.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
11 str. ATCC 33695]
gi|188524361|ref|ZP_03004393.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|195867798|ref|ZP_03079798.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
gi|198273858|ref|ZP_03206392.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|209554009|ref|YP_002284883.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
10 str. ATCC 33699]
gi|225551465|ref|ZP_03772411.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
gi|184209141|gb|EDU06184.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
5 str. ATCC 27817]
gi|188019055|gb|EDU57095.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
7 str. ATCC 27819]
gi|188998131|gb|EDU67228.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
11 str. ATCC 33695]
gi|195660109|gb|EDX53489.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|195660495|gb|EDX53752.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
gi|198249613|gb|EDY74395.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|209541510|gb|ACI59739.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
10 str. ATCC 33699]
gi|225379280|gb|EEH01645.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
Length = 219
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+VPS+LA D + E++ K + IH+DVMD +V N +F + + L ++ +
Sbjct: 4 QLVPSLLAFDKKQPYEQLKIFQKHHLQTIHYDVMDLAYVNNTAFETEHLEWLLK-NNFLV 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT---GVAINPETP 122
HLM+ + I I+FH E + + + +L I + K + G+AI+P
Sbjct: 63 HIHLMVINPLQKIKQYFKYKPTHISFHFEMNDY-QTNLLIIDEIKKHSIFAGIAIHPHLS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + E+D I M+V PG GGQ +E ++ K+++ K +++ +E+DGG+T
Sbjct: 122 LNDYAFYLKEVDYITFMSVVPGKGGQLFLEESLLKLQELYDYKIKNNLTFKIEIDGGITL 181
Query: 181 RNIKSLVQAGADLLVVGS 198
IK + D V GS
Sbjct: 182 EIIKK-INIPIDFFVSGS 198
>gi|291532578|emb|CBL05691.1| Pentose-5-phosphate-3-epimerase [Megamonas hypermegale ART12/1]
Length = 114
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
K +A+ P TP++ ++D++ E+DM+L+MTV PGFGGQ+ +E + K+++ L + +
Sbjct: 2 KAAIAVKPATPISEIKDLLGELDMVLVMTVEPGFGGQKFMEDQMEKVKELVKLREENNYK 61
Query: 172 --LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+EVDGGV IK+ +GA+++V GS+ K
Sbjct: 62 YDIEVDGGVNPETIKTCFASGANVIVAGSAVLGAK 96
>gi|65321187|ref|ZP_00394146.1| COG0036: Pentose-5-phosphate-3-epimerase [Bacillus anthracis str.
A2012]
Length = 89
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRXITSLP 61
Query: 65 FDCHLMIS 72
D HLM+
Sbjct: 62 LDVHLMMK 69
>gi|222874543|gb|EEF11674.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLG+E+ N+ +GA IHFDVMD +VPN++FG + +L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGDEVKNVIASGADWIHFDVMDNHYVPNLTFGPMICEALKPH 60
Query: 61 SDS------VFDCHLMIS 72
+ + D HLM+S
Sbjct: 61 AKTPDGQPVPIDVHLMVS 78
>gi|331090007|ref|ZP_08338897.1| hypothetical protein HMPREF1025_02480 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402921|gb|EGG82487.1| hypothetical protein HMPREF1025_02480 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 228
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ D G ++ I + A +H D+ DG +V G D + L+
Sbjct: 1 MEKKLMLAPSMGCCDLYDFGHQVKFIDEH-ADFLHIDIKDGNYVKTFGVGPDFMTVLKKV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +I A AG IT H + ++ I ++G K G+A+NP
Sbjct: 60 VKKPMDAHLMVKHPQDYIEACAAAGAAYITPHTDCIEGDAFVTINKIISLGCKAGIAMNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
P+ + + + + IM V+ G+ GQ++I KIR + + +E DG
Sbjct: 120 AAPLEAIRYYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLAKWREEMKLDFLIEADGS 179
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK-KSALA 222
+ + L +AGAD++V+G + +N+ +I A + + + KS LA
Sbjct: 180 MNAGVYAPLYEAGADMVVLGPPALWNKDEDIEKAWAIMEQEVKSELA 226
>gi|56415925|ref|YP_153000.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197364852|ref|YP_002144489.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|81599633|sp|Q5PJE1|LSRE_SALPA RecName: Full=Putative epimerase lsrE
gi|56130182|gb|AAV79688.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197096329|emb|CAR61932.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 254
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVEQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G D +V GS+ F
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFR 226
>gi|332815350|ref|XP_001145318.2| PREDICTED: ribulose-phosphate 3-epimerase isoform 1 [Pan
troglodytes]
Length = 199
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPFF------ 54
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D H+M+S + + +A AG + TFH E++ + ++ I G K+ E
Sbjct: 55 ----LDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAE 110
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ + + + + PG L + P S+ +EVDGGV
Sbjct: 111 V------QWHSQGPLQVGLAIKPGTSVHWL-RTQFP------------SLDIEVDGGVGP 151
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ +AGA+++V GS+ +
Sbjct: 152 DTVHKCAEAGANMIVSGSAIMRSE 175
>gi|302337342|ref|YP_003802548.1| ribulose-phosphate 3-epimerase [Spirochaeta smaragdinae DSM 11293]
gi|301634527|gb|ADK79954.1| Ribulose-phosphate 3-epimerase [Spirochaeta smaragdinae DSM 11293]
Length = 230
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ + + L + I N TK A H DV D FVP + F D+I ++ +D HL
Sbjct: 19 SLWSGNLVNLEKSI-NETKNYADVYHLDVSDAHFVPGLLFFPDLIHAINMKTDIPLHTHL 77
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK---TGVAINPETPVAIL 126
M+ H++ ++G D IT H E ++ I + KK G++I E+ + +L
Sbjct: 78 MMEDPIKHVDAFIESGSDFITVHLELGE--KKVGEIIAYLKKKCIHVGLSICVESDIMLL 135
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGGVTSRN 182
E +D++D+IL+M G G + ++T +++ KA+I + I L VDGG+
Sbjct: 136 EKYLDDLDLILLMGTKIGIKGVSMEKNTPDRVKGIKAMIQAHGLENKIILSVDGGIREHT 195
Query: 183 IKSLVQAGADLLVVGSSFFNQKG---EISYAKRLN 214
+ L +AGAD++ GS FN K +S+ LN
Sbjct: 196 VPLLREAGADMITPGSLVFNSKNLTDTVSWLHTLN 230
>gi|7109695|gb|AAF36766.1| ribulose-phosphate 3-isomerase [Mycoplasma gallisepticum]
gi|28212483|gb|AAO37622.1| ribulose-phosphate 3-isomerase [Mycoplasma gallisepticum]
Length = 215
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 22 EISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINII 81
++++ + G +IH+DVMD FV N +F + +L+ + + HLM++ + +HI +
Sbjct: 19 KLASYKQLGLNKIHYDVMDE-FVNNKAFDERYVDNLKDLGYQI-NVHLMVNKVANHILVY 76
Query: 82 ADAGCDIITFHPE----SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
A C+ I+FH E + I + L I KK G+A T V D I +D +
Sbjct: 77 AKTRCNQISFHVEPLANNKQLINKYLAYIKTNNKKAGLAFKFNTDVNDYLDQIKLVDYVT 136
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN---IKSLVQAGADLL 194
+M+V PG GGQ I AK + + +E+DGG+ +K LV
Sbjct: 137 LMSVEPGAGGQAFNPLVYRNI--AKLIKFNPKLEIEIDGGINFEKAIELKGLVSG----F 190
Query: 195 VVGSSFF 201
V GS F+
Sbjct: 191 VSGSYFY 197
>gi|16762355|ref|NP_457972.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29143843|ref|NP_807185.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213162422|ref|ZP_03348132.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213426218|ref|ZP_03358968.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213581676|ref|ZP_03363502.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213646397|ref|ZP_03376450.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289828410|ref|ZP_06546292.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|81593266|sp|Q8Z2Y1|LSRE_SALTI RecName: Full=Putative epimerase lsrE
gi|25512561|pir||AE0940 probable ribulose-phosphate 3-epimerase STY3790 [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16504659|emb|CAD09543.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139479|gb|AAO71045.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 254
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------------GVAIN 118
++ + AG IT E H+ T+ +G++T G+++
Sbjct: 84 VADQWAAAQACVKAGAHCITLQAEGDIHLHH---TLSWLGQQTVPVIDGEMPVIRGISLC 140
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG
Sbjct: 141 PATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDG 200
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFN 202
+T + SL+ G D +V GS+ F
Sbjct: 201 SLTQDQLPSLIAQGIDRVVSGSALFR 226
>gi|200389065|ref|ZP_03215677.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199606163|gb|EDZ04708.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 254
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G D +V GS+ F
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFR 226
>gi|167551426|ref|ZP_02345181.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168821568|ref|ZP_02833568.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|204930173|ref|ZP_03221150.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|238912226|ref|ZP_04656063.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|204320577|gb|EDZ05779.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323729|gb|EDZ11568.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205341805|gb|EDZ28569.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088491|emb|CBY98250.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322613157|gb|EFY10101.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322619215|gb|EFY16098.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322626082|gb|EFY22894.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322626458|gb|EFY23264.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322632428|gb|EFY29176.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322635090|gb|EFY31811.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322642708|gb|EFY39298.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322646466|gb|EFY42977.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322650746|gb|EFY47147.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322652930|gb|EFY49267.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322657244|gb|EFY53524.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322662268|gb|EFY58483.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322666802|gb|EFY62978.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322672073|gb|EFY68188.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322675794|gb|EFY71866.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322681789|gb|EFY77815.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322684015|gb|EFY80024.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323193287|gb|EFZ78502.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323197644|gb|EFZ82777.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323200781|gb|EFZ85852.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323207213|gb|EFZ92165.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323211416|gb|EFZ96257.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323218539|gb|EGA03247.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323220979|gb|EGA05411.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323225956|gb|EGA10175.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231635|gb|EGA15747.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323236117|gb|EGA20195.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323239462|gb|EGA23511.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243945|gb|EGA27956.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323249307|gb|EGA33224.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323250450|gb|EGA34333.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323258904|gb|EGA42556.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323260148|gb|EGA43771.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323265267|gb|EGA48764.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323270489|gb|EGA53935.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
Length = 254
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G D +V GS+ F
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFR 226
>gi|297828562|ref|XP_002882163.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328003|gb|EFH58422.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 21/131 (16%)
Query: 36 FDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPES 95
F + DG FVPN++ GA +I SLR ++++ DCHLM+++ ++ +A AG TFH E
Sbjct: 66 FHLQDGHFVPNLTIGAPLIESLRKHTNAYLDCHLMVTNPIDYVEHMAKAGASGFTFHVEV 125
Query: 96 SPHIRRSLRTI------------------HAMGKKTGVAINPETPVAILEDVID---EID 134
+ I +TI + G + VA+ P TPV + +++ ++
Sbjct: 126 AKGILAPFQTILIFYGFDLNCLFQRIGNNLSAGMRPAVALKPGTPVEQVYPLVEGTIPVE 185
Query: 135 MILIMTVNPGF 145
M+L+MTV PGF
Sbjct: 186 MVLVMTVEPGF 196
>gi|16767346|ref|NP_462961.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|62182539|ref|YP_218956.1| epimerase [Salmonella enterica subsp. enterica serovar Choleraesuis
str. SC-B67]
gi|161617213|ref|YP_001591178.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167991654|ref|ZP_02572753.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233023|ref|ZP_02658081.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168467424|ref|ZP_02701261.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194469392|ref|ZP_03075376.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197250597|ref|YP_002149008.1| epimerase [Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197263542|ref|ZP_03163616.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|75505430|sp|Q57HD7|LSRE_SALCH RecName: Full=Putative epimerase lsrE
gi|81594799|sp|Q8ZKP8|LSRE_SALTY RecName: Full=Putative epimerase lsrE
gi|209573038|sp|A9MZG7|LSRE_SALPB RecName: Full=Putative epimerase lsrE
gi|16422646|gb|AAL22920.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62130172|gb|AAX67875.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161366577|gb|ABX70345.1| hypothetical protein SPAB_05054 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194455756|gb|EDX44595.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|195630206|gb|EDX48846.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197214300|gb|ACH51697.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241797|gb|EDY24417.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|205329997|gb|EDZ16761.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332876|gb|EDZ19640.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|261249196|emb|CBG27058.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267996377|gb|ACY91262.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160587|emb|CBW20118.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312915196|dbj|BAJ39170.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321225371|gb|EFX50429.1| Ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322717037|gb|EFZ08608.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323132425|gb|ADX19855.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332990909|gb|AEF09892.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 254
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G D +V GS+ F
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFR 226
>gi|13358019|ref|NP_078293.1| d-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|167971539|ref|ZP_02553816.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 6
str. ATCC 27818]
gi|168281646|ref|ZP_02689313.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 14
str. ATCC 33697]
gi|168307788|ref|ZP_02690463.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 1
str. ATCC 27813]
gi|170762137|ref|YP_001752541.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 3
str. ATCC 27815]
gi|11270178|pir||A82888 d-ribulose-5-phosphate 3 epimerase UU456 [imported] - Ureaplasma
urealyticum
gi|6899449|gb|AAF30868.1|AE002142_2 d-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|168827714|gb|ACA32976.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 3
str. ATCC 27815]
gi|171902660|gb|EDT48949.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 1
str. ATCC 27813]
gi|182676102|gb|EDT88007.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 14
str. ATCC 33697]
gi|186700954|gb|EDU19236.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 6
str. ATCC 27818]
Length = 219
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+VPS+LA D E++ K + IH+DVMD +V N +F + + L +D +
Sbjct: 4 QLVPSLLAFDKKYPYEQLKIFKKHHLQTIHYDVMDLTYVNNTAFETEHLEWLLK-NDFLV 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK---TGVAINPETP 122
HLM+ + I I+FH E + + + +L I+ + K G+AI+P
Sbjct: 63 HIHLMVINPLEKIKQYFIYKPTRISFHFEMNDY-QTNLLIINEIKKHHVLAGIAIHPCLS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
+ + E+D I M+V PG GGQ +E ++ K+++ K + +E+DGG+T
Sbjct: 122 LNDYASYLKEVDYITFMSVIPGKGGQIFLEESLLKLKKLYEYKIKNNFKFKIEIDGGITL 181
Query: 181 RNIKSLVQAGADLLVVGS 198
IK + D V GS
Sbjct: 182 EVIKK-INIPIDFFVSGS 198
>gi|168244164|ref|ZP_02669096.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194449770|ref|YP_002048082.1| epimerase [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194408074|gb|ACF68293.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205336924|gb|EDZ23688.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 254
Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLFCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G D +V GS+ F
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFR 226
>gi|193788335|dbj|BAG53229.1| unnamed protein product [Homo sapiens]
Length = 198
Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I SIL +D + LG E + +GA +H DVMDG FVPNI+FG
Sbjct: 1 MASGCKIGSSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFG---------- 50
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
FD H+M+S + + +A AG + TFH E++ + ++ I G K+ E
Sbjct: 51 -HPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAE 109
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ + + + + PG L + P S+ +EVDGGV
Sbjct: 110 V------QWHSQGPLQVGLAIKPGTSVHWL-RTQFP------------SLDIEVDGGVGP 150
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ +AGA+++V GS+ +
Sbjct: 151 DTVHKCAEAGANMIVSGSAIMRSE 174
>gi|194445790|ref|YP_002043342.1| epimerase [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|194404453|gb|ACF64675.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 254
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEVLNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G D +V GS+ F
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFR 226
>gi|213621198|ref|ZP_03373981.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 101
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I I LEVDGGV NI
Sbjct: 2 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 61
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F++ Y K +++++
Sbjct: 62 GEIAAAGADMFVAGSAIFDKP---DYKKVIDEMR 92
>gi|168263016|ref|ZP_02684989.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|198244873|ref|YP_002218005.1| epimerase [Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205354344|ref|YP_002228145.1| epimerase [Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|207859267|ref|YP_002245918.1| epimerase [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|197939389|gb|ACH76722.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205274125|emb|CAR39134.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205348258|gb|EDZ34889.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206711070|emb|CAR35444.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|326629470|gb|EGE35813.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 254
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G + +V GS+ F
Sbjct: 204 QDQLPSLIAQGINRVVSGSALFR 226
>gi|326625797|gb|EGE32142.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 231
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 3 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 60
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 61 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 121 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G + +V GS+ F
Sbjct: 181 QDQLPSLIAQGINRVVSGSALFR 203
>gi|148826586|ref|YP_001291339.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittEE]
gi|229845817|ref|ZP_04465929.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 7P49H1]
gi|148716746|gb|ABQ98956.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittEE]
gi|229810821|gb|EEP46538.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 7P49H1]
Length = 230
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 110/215 (51%), Gaps = 16/215 (7%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA+++ + + ++ +++ + +HFD+ DG F P + G+ I+ + + D HLM
Sbjct: 21 ILASNWLKFSKTLNVLSQNQLRLLHFDIADGQFSPFFTVGSMAIQQFPN--TFIKDVHLM 78
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT---GVAINPETPVAILE 127
+ + + AG DI+T E++ + +L+ + +KT G+AI P TP+ +L
Sbjct: 79 VKDQFNVVKKCVAAGADIMTLQVENTVDLDNTLQWLKT--QKTILCGLAICPNTPLELLY 136
Query: 128 DVIDEIDMILIMTVNPGFGGQ----QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +ID+I I+T++P G + Q+ E I + Q ++ IS +DG +T
Sbjct: 137 PYLPDIDLIQILTLDPRTGEKANLDQITERLIQLLNQLHDSGQEKLIS--IDGSMTFELA 194
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + D +V GS+ F+ S+ K L + KK
Sbjct: 195 SHLKKYEIDWVVSGSALFSSD---SFEKTLIEWKK 226
>gi|260581585|ref|ZP_05849382.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae NT127]
gi|260095178|gb|EEW79069.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae NT127]
Length = 230
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 16/215 (7%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA+D+ + + ++ ++++ +HFD+ DG F P + G+ I+ + + D HLM
Sbjct: 21 ILASDWLKFSKTLNVLSQSQLHLLHFDIADGQFSPFFTVGSMAIQQFPN--TFIKDVHLM 78
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT---GVAINPETPVAILE 127
+ + AG DI+T E++ + +L+ + +KT G+AI P TP+ +L
Sbjct: 79 VKDQFNVAKKCVAAGADIMTLQVENTVDLDNTLQWLKT--QKTILCGLAICPNTPLELLY 136
Query: 128 DVIDEIDMILIMTVNPGFGGQ----QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +ID+I I+T++P G + Q+ E I + Q ++ IS +DG +T
Sbjct: 137 PYLPDIDLIQILTLDPRTGEKANLDQITERLIQLLNQLHDSGQEKLIS--IDGSMTFELA 194
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + D +V GS+ F+ S+ K L + KK
Sbjct: 195 SHLKKYEIDWVVSGSALFSSD---SFEKTLIEWKK 226
>gi|225554409|gb|EEH02707.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus G186AR]
gi|240273444|gb|EER36964.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus H143]
gi|325087343|gb|EGC40653.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus H88]
Length = 84
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG S++ K+ + IH D+MDG FVPNI+FGA V+ +R +
Sbjct: 1 MSPPTIIAPSILSADFAALGSACSDLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRRH 60
Query: 61 --------SDSVFDCHLMIS 72
FDCH+MI+
Sbjct: 61 VARPSNPGGKGTFDCHMMIA 80
>gi|86740502|ref|YP_480902.1| ribulose-5-phosphate 3-epimerase [Frankia sp. CcI3]
gi|86567364|gb|ABD11173.1| ribulose-5-phosphate 3-epimerase [Frankia sp. CcI3]
Length = 259
Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + LG E+ T A +HFD+ DG F P++ F ++ +LR + F HL
Sbjct: 29 SLWSADLAALGVELDR-TSGVADVVHFDIADGSFGPDLMFSPAMLAALRPRTTVPFHAHL 87
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
+ + I+ + AG D+IT P + R+L I G G+A+ +T V
Sbjct: 88 LARRPIALIDAVTTAGADLITV-PAEIDDVARALHRIRDNGNAAGLALGVDTRVVDARPY 146
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI----GKRSISLEVDGGVTSRNIKS 185
+ ID+++++ G L + + ++ A+ L+ + ++ L +GGV +R +
Sbjct: 147 LGAIDVLVVVCTPGGARDAALTLAALRRLHAARRLVEATGHQHTVRLLAEGGVGARTVGP 206
Query: 186 LVQAGADLLV 195
L AG D L+
Sbjct: 207 LSVAGVDGLI 216
>gi|207093432|ref|ZP_03241219.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPKX_438_AG0C1]
Length = 111
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L EEI +++ A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAEEIESVSNADF--LHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D HLM+ + + + A II+ H E+ H R L+ I G G+ +
Sbjct: 59 LDVHLMVENASFFVGLFAPLKPQIISIHAENEKHPHRVLQLIKNSGITPGIVL 111
>gi|224585891|ref|YP_002639690.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|224470419|gb|ACN48249.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 254
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSL-----RTIHAMGKKT----GVAINPET 121
++ + AG IT E H+ +L +T+ +G + G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ ++ ++++I ++ VNP +G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPRYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
+ SL+ G D +V GS+ F
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFR 226
>gi|86146533|ref|ZP_01064855.1| Ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
gi|85835590|gb|EAQ53726.1| Ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
Length = 243
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYS 61
++I + D+ + + + ++ AGA IH D D + N+ G ++ +R Y+
Sbjct: 3 KVKIAAGLAHVDYGHIADVVKEVSDAGADYIHCDAADMHDLKNLQLMGGHQIVEGIRPYT 62
Query: 62 DSVFDCHLMISSIDS-HINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAI 117
+ + H D I+ IA AG D++ E +P + ++ G K G+ +
Sbjct: 63 EKPIEVHAYFKDCDKLFIDKIAAAGADMLILPAEHFIGAP-LCYIIKYCQNHGMKFGLTV 121
Query: 118 NPETPVAILEDVIDEID--MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE-- 173
TPV+ +++ I +D I+I + G +S I IR+A+ LI +R+ + E
Sbjct: 122 GALTPVSFVKESIYYLDRLHIVIHGITDGDDEWLWRKSAIAMIREARELINERNPNCELC 181
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
VDGG+ + NI+ L+ D++V ++ F K I+ R
Sbjct: 182 VDGGIRNHNIEELLNEDIDVMVASTNIFGHKDGITAGVR 220
>gi|289809745|ref|ZP_06540374.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 225
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
+H D+MDG F P + G + L + D HLM++ + AG IT
Sbjct: 20 LHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLMVADQWAAAQACVKAGAHCITLQA 77
Query: 94 ESSPHIRRSLRTIHAMGKKT------------GVAINPETPVAILEDVIDEIDMILIMTV 141
E H+ T+ +G++T G+++ P TP+ ++ ++ ++++I ++ V
Sbjct: 78 EGDIHLHH---TLSWLGQQTVPVIDGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAV 134
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSS 199
NPG+G + ++ Q L+G + + +DG +T + SL+ G D +V GS+
Sbjct: 135 NPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSA 194
Query: 200 FFNQKGEISYAKRLNDLKKSA 220
F + + + K A
Sbjct: 195 LFRDDRLVENTRSWRAMFKVA 215
>gi|218708235|ref|YP_002415856.1| putative pentose-5-phosphate-3-epimerase [Vibrio splendidus LGP32]
gi|218321254|emb|CAV17204.1| putative pentose-5-phosphate-3-epimerase [Vibrio splendidus LGP32]
Length = 243
Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYS 61
++I + D+ + + + ++ AGA IH D D + N+ G ++ +R Y+
Sbjct: 3 KVKIAAGLAHVDYGHIADVVKEVSDAGADYIHCDAADMHDLKNLQLMGGHQIVEGIRPYT 62
Query: 62 DSVFDCHLMISSIDS-HINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAI 117
+ + H D I+ IA AG D++ E +P + ++ G K G+ +
Sbjct: 63 EKPIEVHAYFKDCDKLFIDKIAAAGADMLILPAEHFIGAP-LCYIIKYCQNHGMKFGLTV 121
Query: 118 NPETPVAILEDVIDEID--MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE-- 173
TPV+ +++ I +D I+I + G +S I IR+A+ LI +R+ + E
Sbjct: 122 GALTPVSFVKESIYYLDRLHIVIHGITDGDDEWLWRKSAIAMIREARELINERNPNCELC 181
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
VDGG+ + NI+ L+ D++V ++ F K I+ R
Sbjct: 182 VDGGIRNHNIEELLNEDIDVMVASTNIFGHKDGITAGVR 220
>gi|261250717|ref|ZP_05943291.1| ribulose-phosphate 3-epimerase [Vibrio orientalis CIP 102891]
gi|260937590|gb|EEX93578.1| ribulose-phosphate 3-epimerase [Vibrio orientalis CIP 102891]
Length = 240
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYS 61
++I + D+ + + + ++ AGA IH D D + N+ G ++ +R Y+
Sbjct: 3 KVKIAAGLAHVDYGHMADIVKEVSDAGADYIHCDAADMHDLKNMQLMGGHQIVEGIRQYT 62
Query: 62 DSVFDCHLMISSIDS-HINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAI 117
D + H D + IA AG D++ E+ +P + ++ K G+ +
Sbjct: 63 DKPIEVHAYFKDCDRLFVEKIAAAGADMLILPAENFLGAP-LAYMMKYCRDYNMKFGLTV 121
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VD 175
TPV+ +++ I +D + I+ ES I IR+A+ LI +R+ + E VD
Sbjct: 122 GCFTPVSFVKEAIYYLDRLHIVIHGVNNDEWLWRESAIEMIREARQLINERNPNCELCVD 181
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
GG+ + N+++L++ D++V ++ F + I+
Sbjct: 182 GGIRNHNLEALLKEDIDVMVASTNIFGHEKGIT 214
>gi|113460206|ref|YP_718263.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 129PT]
gi|112822249|gb|ABI24338.1| ribulose-5-phosphate 3-epimerase [Haemophilus somnus 129PT]
Length = 236
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
IL+A++ +L EE++ + + +HFD+ DG F + GA I+ ++ D HLM
Sbjct: 19 ILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFK--DVHLM 76
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----------GVAINPE 120
+ + + G +++T E ++ + A K T G + PE
Sbjct: 77 VRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWL-AKQKTTYANQVYPVLIGACLCPE 135
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP++ LE +D+ID+I ++T++P G + E + ++ Q + +G R + + +DG +
Sbjct: 136 TPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSM 195
Query: 179 TSRNIKSLVQAGA--DLLVVGSSFFNQKGEI 207
T K Q D LV GS+ F+ GE+
Sbjct: 196 TLELAKYFKQGTHQIDWLVSGSALFS--GEL 224
>gi|160914681|ref|ZP_02076895.1| hypothetical protein EUBDOL_00688 [Eubacterium dolichum DSM 3991]
gi|158433221|gb|EDP11510.1| hypothetical protein EUBDOL_00688 [Eubacterium dolichum DSM 3991]
Length = 218
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
+H+DV+DG F FG +++ + Y+ HL + ++ + +G I H
Sbjct: 21 LHYDVVDGIFNDCFIFGDKILQVISEYTKLPILVHLACENPFPYLKPMIRSGASEIAIHY 80
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAINPET-PVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
E++ +L I +G +A +T P + D IL +TVNPG+ GQ +
Sbjct: 81 EATVDCMETLNIIKQLGACAVLAFKCDTSPPKDFLSLAKVADKILKLTVNPGYAGQTIHL 140
Query: 153 STIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+ +RQ + L+ + I +EVDG + I ++AGAD +GSS
Sbjct: 141 DALEHVRQMRELLNQAKIYRRIEVDGNINQTTINRCIEAGADTFTLGSS 189
>gi|170718244|ref|YP_001785264.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
gi|168826373|gb|ACA31744.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
Length = 236
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 19/211 (9%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
IL+A++ +L EE++ + + +HFD+ DG F + GA I+ ++ D HLM
Sbjct: 19 ILSANWLQLNEEVTTLLEKQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFK--DVHLM 76
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----------GVAINPE 120
+ + + G +++T E ++ + A K T G + PE
Sbjct: 77 VRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWL-AKQKTTYANQVYPVLIGACLCPE 135
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP++ LE +D+ID+I ++T++P G + E + ++ Q + +G R + + +DG +
Sbjct: 136 TPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSM 195
Query: 179 TSRNIKSLVQAGA--DLLVVGSSFFNQKGEI 207
T K Q D +V GS+ F+ GE+
Sbjct: 196 TLELAKYFKQGTHQIDWIVSGSALFS--GEL 224
>gi|325068808|ref|ZP_08127481.1| ribulose-phosphate 3-epimerase [Actinomyces oris K20]
Length = 91
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADLLVVG 197
TV PGFGGQ IES +PKIR+A+ L+G R + L +VDGG+T++ I+ +AGAD+ V G
Sbjct: 1 TVEPGFGGQSFIESMLPKIRRARELVGVRGLDLRVQVDGGITAQTIERAAEAGADVFVAG 60
Query: 198 SSFFN 202
S+ +
Sbjct: 61 SAVYR 65
>gi|255975893|ref|ZP_05426479.1| LOW QUALITY PROTEIN: ribulose-phosphate 3-epimerase [Enterococcus
faecalis T2]
gi|255968765|gb|EET99387.1| LOW QUALITY PROTEIN: ribulose-phosphate 3-epimerase [Enterococcus
faecalis T2]
Length = 144
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-- 158
R + IH K G+ +NPETP+ + I+ +D I IMTV+PGF GQ+ IE T+ KI
Sbjct: 15 RLIDQIHNANLKAGIVLNPETPIESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVA 74
Query: 159 -RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
R + G R + +E+DG + K + AG D+ +VG S F +I A R+
Sbjct: 75 LRNLREEKGYRYV-IEMDGSSNRNSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWRM 130
>gi|78713883|gb|ABB50925.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713885|gb|ABB50926.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713887|gb|ABB50927.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713889|gb|ABB50928.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713891|gb|ABB50929.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713895|gb|ABB50931.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713901|gb|ABB50934.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713903|gb|ABB50935.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713905|gb|ABB50936.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713907|gb|ABB50937.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713909|gb|ABB50938.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713911|gb|ABB50939.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713913|gb|ABB50940.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713915|gb|ABB50941.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|165978672|gb|ABY76790.1| AraD [Chlamydia trachomatis]
gi|165978674|gb|ABY76791.1| AraD [Chlamydia trachomatis]
Length = 111
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I ++GA IH DVMDG FVPNI+FG V+ ++ ++ + H MI + + AG
Sbjct: 1 IEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 61 ADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 111
>gi|323454712|gb|EGB10581.1| hypothetical protein AURANDRAFT_61957 [Aureococcus anophagefferens]
Length = 1052
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDG---CFVPNISFGADVIRSLRSY--S 61
+ PS+LAAD + L + AGA +H DV DG C + G + +LR+
Sbjct: 823 VAPSLLAADPANLADAARAALSAGATWLHVDVFDGSKACGGALSNMGPGTVSALRAALGP 882
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D+ D H + H+++ A +TF E+ + + I A+G + GV + P T
Sbjct: 883 DAFLDVHAGV----RHLDVEAYRDASQLTFQFEAVDEPVAACKQIRALGLRAGVCVAPAT 938
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P L+ ++D +D++ ++ V PG GGQ E + K+R +A + L DGG+
Sbjct: 939 PADALDPLLDAGLVDLVDVLFVEPGRGGQDFNEDCLEKLRHVRAR--APGVDLMADGGIH 996
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKG 205
AGA++LV G+ F +G
Sbjct: 997 ETTAYLAAAAGANVLVAGTFCFRDRG 1022
>gi|149189481|ref|ZP_01867765.1| Ribulose-phosphate 3-epimerase [Vibrio shilonii AK1]
gi|148836638|gb|EDL53591.1| Ribulose-phosphate 3-epimerase [Vibrio shilonii AK1]
Length = 238
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYS 61
++I + D+ + + + ++ AGA IH D D + N+ G ++ +R Y+
Sbjct: 3 KVKIAAGLAHVDYGHMADIVKEVSDAGADYIHCDAADMHDLKNMQLMGGHQIVEGIRPYT 62
Query: 62 DSVFDCHLMISSIDS-HINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAI 117
+ + H D + IA AG D++ E+ +P + ++ K G+ +
Sbjct: 63 EKPIEVHAYFKDCDRLFVEKIAKAGADMLILPAENFLGAP-LAYMMKYCRDYNMKFGLTV 121
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VD 175
TPV+ +++ I +D + I+ ES I IR+A+ LI +R+ + E VD
Sbjct: 122 GCFTPVSFVKEAIYYLDRLHIVIHGVNNDEWLWRESAIEMIREARQLINERNPNCELCVD 181
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
GG+ + N+++L++ D++V ++ F + I+
Sbjct: 182 GGIRNHNLEALLKEDIDVMVASTNIFGHEKGIT 214
>gi|307278117|ref|ZP_07559201.1| ribulose-phosphate 3 epimerase family protein [Enterococcus
faecalis TX0860]
gi|306505514|gb|EFM74700.1| ribulose-phosphate 3 epimerase family protein [Enterococcus
faecalis TX0860]
Length = 141
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-- 158
R + IH K G+ +NPETP+ + I+ +D I IMTV+PGF GQ+ IE T+ KI
Sbjct: 12 RLIDQIHNANLKAGIVLNPETPIESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVA 71
Query: 159 -RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
R + G R + +E+DG + K + AG D+ +VG S F +I A R+
Sbjct: 72 LRNLREEKGYRYV-IEMDGSSNRNSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWRM 127
>gi|78713893|gb|ABB50930.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
Length = 111
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I ++GA IH DVMDG FVPNI+FG V+ ++ ++ + H MI + + AG
Sbjct: 1 IEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 61 ADRIIVHFEAAENIKEIVSYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 111
>gi|78713897|gb|ABB50932.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713899|gb|ABB50933.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
Length = 111
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I ++GA IH DVMDG FVPNI+FG V+ ++ ++ + H MI + + AG
Sbjct: 1 IEESGADFIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 61 ADRIIVHFEAAENIKEIVSYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 111
>gi|78713917|gb|ABB50942.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
Length = 111
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I ++GA IH DVMDG FVPNI+FG V+ ++ ++ + H MI + + AG
Sbjct: 1 IEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 61 ADRIIVHFEAAENIKEIISHIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 111
>gi|330903983|gb|EGH34555.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 73
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 SDSV-FDCHLMI 71
+ D HLM+
Sbjct: 60 GVTAPIDVHLMV 71
>gi|114685771|ref|XP_001136386.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase [Pan
troglodytes]
Length = 159
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
H+M+S + + +A G + FH E + + ++ I G K G+AI P T V L
Sbjct: 2 HVMVSKPEQWVKPMAIRGANQYIFHLEETENPGALIKDIQENGMKVGLAIKPGTSVQYLA 61
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+++ M L+MTV PGFGG + ++ + K+ + I S+++EV GG+ +
Sbjct: 62 PWANQLGMTLVMTVEPGFGGHKFMKDMMLKVHWLR--IQFPSLAIEVAGGIDPDTVHRCA 119
Query: 188 QAGADLLVVGSS 199
+A A+++V GS+
Sbjct: 120 EAEANMIVSGSA 131
>gi|71425611|ref|XP_813140.1| ribulose-phosphate 3-epimerase [Trypanosoma cruzi strain CL Brener]
gi|70877996|gb|EAN91289.1| ribulose-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 146
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID--EIDMILI 138
ADAG TFH E++ I G + GVAI+P T + L +I+ +DM+L+
Sbjct: 2 FADAGASQFTFHIEATQEPVALASKILEAGMQVGVAISPRTAIDGLIPLIENGHLDMVLV 61
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVG 197
MTV PGF GQ+ + + K+RQ L G+ ++++VDG + + AGA+ LV G
Sbjct: 62 MTVEPGFAGQKFLSEPLAKVRQ---LRGRYPHLNIQVDGSINLVTVDEAALAGANCLVPG 118
Query: 198 SSFFNQK 204
+ F K
Sbjct: 119 QAVFKAK 125
>gi|213865176|ref|ZP_03387295.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 218
Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 19/196 (9%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------------GVAIN 118
++ + AG IT E H+ +L +G++T G+++
Sbjct: 84 VADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSW---LGQQTVPVIDGEMPVIRGISLC 140
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG
Sbjct: 141 PATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDG 200
Query: 177 GVTSRNIKSLVQAGAD 192
+T + SL+ G D
Sbjct: 201 SLTQDQLPSLIAQGID 216
>gi|260577001|ref|ZP_05844981.1| Ribulose-phosphate 3-epimerase [Rhodobacter sp. SW2]
gi|259020757|gb|EEW24073.1| Ribulose-phosphate 3-epimerase [Rhodobacter sp. SW2]
Length = 242
Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 23/232 (9%)
Query: 1 MTPSIQ--------IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGAD 52
M P +Q I + AA RL + G +HFDVMDG FVP I+ G
Sbjct: 1 MAPDLQPLRKRCSGISAGLFAASSGRLEAAADQLRHWGGGIVHFDVMDGEFVPQITGGPA 60
Query: 53 VIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---HAM 109
+ S++ + D HLM++ + I A AG DI+T H E++ +
Sbjct: 61 FLAV--SHNSLLRDVHLMVALPERQIEAFARAGADILTVHAEAAGAAAALAAIRAVSERL 118
Query: 110 GKK--TGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
G+ G+A+ P T + LE ++ + D+IL+++++P + + + +P A +
Sbjct: 119 GRAILAGLAVMPGTALEQLEPLLALQPDLILVLSLDP----RNSLPADLPAACARLAALR 174
Query: 167 KRSIS---LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + +DGG+T + G D++V GS+ F + RL D
Sbjct: 175 AGAAAGTVFAIDGGITEATVAQAAACGPDVIVSGSAIFGAADPAAAFGRLTD 226
>gi|213584728|ref|ZP_03366554.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 74
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSI 74
D HLM+ +
Sbjct: 66 DVHLMVKPV 74
>gi|294678402|ref|YP_003579017.1| ribulose-phosphate 3-epimerase [Rhodobacter capsulatus SB 1003]
gi|294477222|gb|ADE86610.1| ribulose-phosphate 3-epimerase-2 [Rhodobacter capsulatus SB 1003]
Length = 241
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 31 AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIIT 90
A+ +HFD+MDG FVP + G + + R D HLM++ + I A+AG D+I+
Sbjct: 38 AEVLHFDLMDGVFVPQFTAGPAFVAACRGRG--FLDVHLMVADPLAQIAACAEAGADLIS 95
Query: 91 FHPESSPHIRRSLRTIHA----MGKK--TGVAINPETPVAILEDVID-EIDMILIMTVNP 143
H E+ P+ +L I + +G+ G+A+ P T +A L ++ D+IL++ ++P
Sbjct: 96 VHAEA-PNAALALARIRSESARLGRPILAGLAVMPGTALAALSGLLALRPDVILVLALDP 154
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
G + + ++ + +AL + L +DGG+T+ I GADL+V GS+ F
Sbjct: 155 RDGAPADVPAAAARLAKLRALCADFAPVLAIDGGITAETIAEACLTGADLVVSGSAIFK 213
>gi|186973115|pdb|3CU2|A Chain A, Crystal Structure Of Ribulose-5-Phosphate 3-Epimerase
(Yp_718263.1) From Haemophilus Somnus 129pt At 1.91 A
Resolution
gi|186973116|pdb|3CU2|B Chain B, Crystal Structure Of Ribulose-5-Phosphate 3-Epimerase
(Yp_718263.1) From Haemophilus Somnus 129pt At 1.91 A
Resolution
Length = 237
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
IL+A++ +L EE++ + + +HFD+ DG F + GA I+ ++ D HL
Sbjct: 20 ILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFK--DVHLX 77
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----------GVAINPE 120
+ + + G +++T E ++ + A K T G + PE
Sbjct: 78 VRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWL-AKQKTTYANQVYPVLIGACLCPE 136
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP++ LE +D+ID+I ++T++P G + E + ++ Q + +G R + + +DG
Sbjct: 137 TPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSX 196
Query: 179 TSRNIKSLVQAGA--DLLVVGSSFFNQKGEI 207
T K Q D LV GS+ F+ GE+
Sbjct: 197 TLELAKYFKQGTHQIDWLVSGSALFS--GEL 225
>gi|149177801|ref|ZP_01856400.1| Ribulose-phosphate 3-epimerase [Planctomyces maris DSM 8797]
gi|148843291|gb|EDL57655.1| Ribulose-phosphate 3-epimerase [Planctomyces maris DSM 8797]
Length = 91
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
++LIM+V PGFGGQ IES+I KI+Q K++I +I L VDGG+ I AGA+
Sbjct: 2 LVLIMSVEPGFGGQSFIESSIEKIKQLKSMIPADTI-LSVDGGIAMDTIAETAGAGANYF 60
Query: 195 VVGSSFFNQKGEISYAKRLNDLKKSA 220
VVGS+ F+Q Y+ +++L A
Sbjct: 61 VVGSAIFDQA---DYSTAVSELAAKA 83
>gi|325069059|ref|ZP_08127732.1| ribulose-5-phosphate 3-epimerase [Actinomyces oris K20]
Length = 95
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 7 IVPSILAADFSRLGEEIS----NITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSIL D + L +E+ ++ GA IH DVMD FVPN+S+G V+ ++ ++S
Sbjct: 4 IHPSILNCDIAHLADELDRVAGDVGAPGADGIHVDVMDNHFVPNLSWGLPVVEAVLAHSS 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE 94
D HLMI D A+AGC I+T H E
Sbjct: 64 LPVDAHLMIRDADRWAPAYAEAGCQIVTPHAE 95
>gi|309777992|ref|ZP_07672934.1| putative ribulose-phosphate 3-epimerase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308914281|gb|EFP60079.1| putative ribulose-phosphate 3-epimerase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 221
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + + ++ I + +H+D++DG F FG +++ R Y+ HL +
Sbjct: 2 DLGNIEKGMNEINHSRIHGLHYDIVDGVFNSCFIFGDQMLKVFRRYTALPIIVHLACQNP 61
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI-LEDVIDEI 133
+I G D I H E+ + + I +G K +A +T V D+ +
Sbjct: 62 IPYIKPCITNGADYIAVHYEAEADLLSVFQMIRELGGKPILAFRCDTSVPHNFTDIAAQA 121
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGA 191
+ IL ++V+PGF GQ + + I + L+ I +EVDG +++ I+ AGA
Sbjct: 122 EWILKLSVHPGFSGQVFQKEALSHIAEMHQLLTAAGIDKRIEVDGNISTATIQECAIAGA 181
Query: 192 DLLVVGSS 199
+ G+S
Sbjct: 182 TMFTGGTS 189
>gi|167949106|ref|ZP_02536180.1| ribulose-phosphate 3-epimerase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 71
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 42/55 (76%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
QI PSIL+ADF++LGEE+ N+ +GA+ +HFDVMD +VPN++ G V +LR +
Sbjct: 7 QIAPSILSADFAKLGEEVDNVLASGAEIVHFDVMDNHYVPNLTIGPLVCEALRKH 61
>gi|329571356|gb|EGG53043.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1467]
Length = 137
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I+ LR S
Sbjct: 4 VEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIKELRKISKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP+
Sbjct: 63 VSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETPI 122
>gi|13905311|gb|AAH06953.1| Rpe protein [Mus musculus]
Length = 76
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMIS 72
D FD H+M+S
Sbjct: 61 LGQDPFFDMHMMVS 74
>gi|213025349|ref|ZP_03339796.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 58
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 2 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQY 55
>gi|225012462|ref|ZP_03702898.1| ribulose-phosphate 3-epimerase [Flavobacteria bacterium MS024-2A]
gi|225003439|gb|EEG41413.1| ribulose-phosphate 3-epimerase [Flavobacteria bacterium MS024-2A]
Length = 233
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 18/232 (7%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYSD 62
I+I + D+ L + + T+AGA IH D D + N+ G +I +RS++D
Sbjct: 4 IKIAAGLAHVDYGHLADIVKEATEAGADYIHSDAADMHDLKNMQLMGGHQIIEGIRSHTD 63
Query: 63 SVFDCHLMISSID-SHINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAIN 118
+CH+ + D I +A G +++ E +P + + K G+ I
Sbjct: 64 KPIECHIYTKTCDLLFIEKLAQVGTNMLILPAEHFIGAP-LAYIINWCRERSMKVGLTIG 122
Query: 119 PETPVAILEDVIDEIDMILIMT----VNPGFGGQQLIESTIPKIRQAKALIGKRSISLE- 173
TP++ +E+ I +ID + I+ G S + +++A+ L+ +++ E
Sbjct: 123 LYTPLSFVEESIYDIDRLHIVVHGVDETDGKDNWGWRSSCLDLLKRARTLVDEKNPKCEI 182
Query: 174 -VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+DGG+ S N+ L+ D++V+ S+ F I+ LK+ A AI+
Sbjct: 183 AIDGGIRSENLAPLIACKPDVVVLSSAIFKDPEGITAG-----LKRCAKAIE 229
>gi|223936705|ref|ZP_03628615.1| ribulose-phosphate 3-epimerase [bacterium Ellin514]
gi|223894556|gb|EEF61007.1| ribulose-phosphate 3-epimerase [bacterium Ellin514]
Length = 117
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE----VDGGVTS 180
+++ +++ID +L+MTVNPGFGGQ I T+PKI+QA A +R + L VDGG+
Sbjct: 1 MVQPYLEQIDSLLVMTVNPGFGGQSFIAETLPKIQQAYAW--RRDLKLNYHIGVDGGINF 58
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
+ + GAD + G+ F ++
Sbjct: 59 KTAAECARVGADAFISGTGVFGER 82
>gi|313899910|ref|ZP_07833413.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312955525|gb|EFR37190.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 238
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 17/212 (8%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYSD 62
I+I + ++ R+ + + ++ AG IH D D + N+ G +I +R +D
Sbjct: 4 IKIAAGLAHVNYGRIADLVKEVSDAGVDYIHSDAADMHDLQNMKLMGGHQIIAGIRPETD 63
Query: 63 SVFDCHLMISSIDS-HINIIADAGCDIITFHPE-----SSPHIRRSLRTIHAMGKKTGVA 116
+CH+ S+D I I +AG D++ E +I R H K G+
Sbjct: 64 KPIECHIYTVSMDRMFIEQIDEAGADMLIIPAEHFIGAQLAYIINWCRERHI---KVGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMT----VNPGFGGQQLIESTIPKIRQAKALIGKRS--I 170
+ TP+ +E+ I +ID + I+T G +S I +++A+ +I +++
Sbjct: 121 LGCYTPLCFVEESIYDIDRLHIVTHGVDETDGKDNWGWRKSAIDLVQRARKMIDEKNPKC 180
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
L VDGG+ + N+ L++ D++V+ S+ F
Sbjct: 181 ELAVDGGLRADNMDKLIECNPDVIVLSSAIFK 212
>gi|255027477|ref|ZP_05299463.1| hypothetical protein LmonocytFSL_16028 [Listeria monocytogenes
FSL J2-003]
Length = 80
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIA 82
HLM+S+ +++I A
Sbjct: 64 VHLMLSNPENYIEKFA 79
>gi|323199881|gb|EFZ84969.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
Length = 122
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++ H
Sbjct: 5 PSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHPLSFH 64
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
LM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 65 LMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPL 119
>gi|167949108|ref|ZP_02536182.1| ribulose-phosphate 3-epimerase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 94
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGAD 192
MIL+M+VNPGFGGQ I +T+ K+R + LI I LE+DGGV NI + AGAD
Sbjct: 1 MILLMSVNPGFGGQSFIPATLDKLRACRKLIDDSGLDIRLEIDGGVKVDNIAEIKAAGAD 60
Query: 193 LLVVGSSFFN 202
V GS F
Sbjct: 61 TFVAGSGIFG 70
>gi|160914622|ref|ZP_02076836.1| hypothetical protein EUBDOL_00629 [Eubacterium dolichum DSM 3991]
gi|158433162|gb|EDP11451.1| hypothetical protein EUBDOL_00629 [Eubacterium dolichum DSM 3991]
Length = 238
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 11/209 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYSD 62
I+I + ++ R+ + + ++AG IH D D + N+ G +I +R +D
Sbjct: 4 IKIAAGLAHVNYGRIADVVKEASEAGVDYIHSDAADMHDLQNMKLMGGHQIIAGIRPETD 63
Query: 63 SVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINP 119
+CH+ S+D I I AG D++ E + + K G+ +
Sbjct: 64 KPIECHIYTVSMDEMFIEQIHQAGADMLIIPAEHFIGAQLAYIINWCRERKMKVGLTLGC 123
Query: 120 ETPVAILEDVIDEIDMILIMT----VNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLE 173
TP+ +E+ I +ID + I+T G +S I +++A+ +I +++ L
Sbjct: 124 YTPLCFVEESIYDIDRLHIVTHGVDETDGKDNWGWRKSAIDLVKRARKMIDEKNPKCELA 183
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+DGG+ + N++ L++ D++V+ S+ F
Sbjct: 184 IDGGLRADNMEPLLECNPDVVVLSSAIFK 212
>gi|126700726|ref|YP_001089623.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
630]
gi|254976662|ref|ZP_05273134.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-66c26]
gi|255094045|ref|ZP_05323523.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile CIP
107932]
gi|255102233|ref|ZP_05331210.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-63q42]
gi|255308095|ref|ZP_05352266.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
ATCC 43255]
gi|255315798|ref|ZP_05357381.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-76w55]
gi|255518458|ref|ZP_05386134.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-97b34]
gi|255651577|ref|ZP_05398479.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-37x79]
gi|260684631|ref|YP_003215916.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
CD196]
gi|260688289|ref|YP_003219423.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
R20291]
gi|306521391|ref|ZP_07407738.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-32g58]
gi|115252163|emb|CAJ70001.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile]
gi|260210794|emb|CBA65780.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
CD196]
gi|260214306|emb|CBE06643.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
R20291]
Length = 238
Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYSD 62
I+I + ++ + + AG +H D D + N+ G +I ++R +D
Sbjct: 4 IKIAAGLAHVNYGHISAVVKEAMDAGVDYVHSDAADMHDLKNMQLMGGHQIIEAIRPVTD 63
Query: 63 SVFDCHLMISSIDS-HINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAIN 118
+CH+ D I IA AGC+++ E +P + + G K G+ I
Sbjct: 64 KPIECHIYTRDCDRLFIEKIAAAGCNLLIIPAEHFLGAP-LAYIINYCREFGMKVGLTIG 122
Query: 119 PETPVAILEDVIDEIDMILIMT----VNPGFGGQQLIESTIPKIRQAKALIGKRS--ISL 172
TP+ +++ I +ID + I+ G +S + +++A+ +I +++ L
Sbjct: 123 CYTPLCFVDEAIYDIDRLQIVVHGVDETDGKDNWGWRKSAVDLVKRARKMIDEKNPKCEL 182
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+DGG+ + N++ L++ D++++ S+ F K I+
Sbjct: 183 AIDGGLRADNMEPLIECNPDVVILSSAIFKDKDGIT 218
>gi|255657051|ref|ZP_05402460.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-23m63]
gi|296452118|ref|ZP_06893829.1| probable pentose-5-phosphate 3-epimerase [Clostridium difficile
NAP08]
gi|296877474|ref|ZP_06901507.1| probable pentose-5-phosphate 3-epimerase [Clostridium difficile
NAP07]
gi|296259068|gb|EFH05952.1| probable pentose-5-phosphate 3-epimerase [Clostridium difficile
NAP08]
gi|296431486|gb|EFH17300.1| probable pentose-5-phosphate 3-epimerase [Clostridium difficile
NAP07]
Length = 238
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYSD 62
I+I + ++ + + AG +H D D + N+ G +I ++R +D
Sbjct: 4 IKIAAGLAHVNYGHISAVVKEAMDAGVDYVHSDAADMHDLKNMQLMGGHQIIEAIRPVTD 63
Query: 63 SVFDCHLMISSIDS-HINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAIN 118
+CH+ D I IA AGC+++ E +P + + G K G+ +
Sbjct: 64 KPIECHIYTRDCDRLFIEKIAAAGCNLLIIPAEHFLGAP-LAYIINYCREFGMKVGLTVG 122
Query: 119 PETPVAILEDVIDEIDMILIMT----VNPGFGGQQLIESTIPKIRQAKALIGKRS--ISL 172
TP+ +++ I +ID + I+ G +S + +++A+ +I +++ L
Sbjct: 123 CYTPLCFVDEAIYDIDRLQIVVHGVDETDGKDNWGWRKSAVDLVKRARKMIDEKNPKCEL 182
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+DGG+ + N++ L++ D++++ S+ F K I+
Sbjct: 183 AIDGGLRADNMEPLIECNPDVVILSSAIFKDKDGIA 218
>gi|207108471|ref|ZP_03242633.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPKX_438_CA4C1]
Length = 90
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGAD 192
++L+M+VNPGFGGQ+ ++ + K + K LI + S LEVDGGV +NI L QAG D
Sbjct: 2 LVLLMSVNPGFGGQKFLDLVLEKCLKVKELIRHYNPSCLLEVDGGVNDKNIFELQQAGVD 61
Query: 193 LLVVGSSFFNQK 204
++V GS F K
Sbjct: 62 VVVSGSYIFKSK 73
>gi|213022884|ref|ZP_03337331.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 203
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 19/183 (10%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------------GVAIN 118
++ + AG IT E H+ +L +G++T G+++
Sbjct: 84 VADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSW---LGQQTVPVIDGEMPVIRGISLC 140
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG
Sbjct: 141 PATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDG 200
Query: 177 GVT 179
+T
Sbjct: 201 SLT 203
>gi|309778132|ref|ZP_07673069.1| putative ribulose-phosphate 3-epimerase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308914138|gb|EFP59941.1| putative ribulose-phosphate 3-epimerase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 238
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYSD 62
I+I + ++ R+ + + ++ AG IH D D + N+ G +I +R +D
Sbjct: 4 IKIAAGLAHVNYGRIADLVKEVSDAGVDYIHSDAADMHDLQNMKLMGGHQIIAGIRPETD 63
Query: 63 SVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINP 119
+CH+ S+D I I +AG +++ E + + K G+ +
Sbjct: 64 KPIECHIYTISMDKMFIEQIDEAGANMLIIPAEHFIGAQLAYIINWCRERKIKVGLTLGC 123
Query: 120 ETPVAILEDVIDEIDMILIMT----VNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLE 173
TP+ +E+ I +ID + I+T G +S I +++A+ +I +++ L
Sbjct: 124 YTPLCFVEESIYDIDRLHIVTHGVDETDGKDNWGWRKSAIDLVQRARKMIDEKNPKCELA 183
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFF 201
VDGG+ + N+ L++ D++V+ S+ F
Sbjct: 184 VDGGLRADNMDKLIECNPDVIVLSSAIF 211
>gi|148993155|ref|ZP_01822721.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
SP9-BS68]
gi|147928129|gb|EDK79147.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
SP9-BS68]
Length = 67
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S V
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMV 63
>gi|1490364|emb|CAB01563.1| unknown [Mus musculus]
Length = 145
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDV-------MDGCFVPNISFGADV 53
M +I PSIL +D + LG E + +GA +H D + VPNI+ G V
Sbjct: 5 MASGRKIGPSILNSDLANLGAECLRMLDSGADYLHLDAPCSSGRSVFWHLVPNITLGHPV 64
Query: 54 IRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRR-SLRTIHAMG 110
+ SLR D FD H+M+S + + + AG + TFH E++ + L+TI G
Sbjct: 65 VESLRKQIGQDPFFDMHIMVSRPEQWVKPMDVAGANQYTFHLEATENPGALDLKTIRENG 124
Query: 111 KKTGVAINPET 121
K G+ I P
Sbjct: 125 MKVGLDIKPRN 135
>gi|207092435|ref|ZP_03240222.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPKX_438_AG0C1]
Length = 88
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADL 193
+L+M+VNPGFGGQ+ ++ + K + K LI + S LEVDGGV +NI L QAG D+
Sbjct: 1 MLLMSVNPGFGGQKFLDLVLEKCLKVKELIRHYNPSCLLEVDGGVNDKNIFELQQAGVDV 60
Query: 194 LVVGSSFFNQK 204
+V GS F K
Sbjct: 61 VVSGSYIFKSK 71
>gi|225352139|ref|ZP_03743162.1| hypothetical protein BIFPSEUDO_03754 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157386|gb|EEG70725.1| hypothetical protein BIFPSEUDO_03754 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 147
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I+ A +H DVMD FVPN++ G ++ + +D
Sbjct: 2 TIQIAPSILSADFCNLERDLKAISNA--DLVHVDVMDHHFVPNLTLGEPIVARICEVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
D HLMI D A G ++FH +P
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGGNP 93
>gi|255027759|ref|ZP_05299745.1| hypothetical protein LmonocytFSL_17891 [Listeria monocytogenes FSL
J2-003]
Length = 109
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ + + D
Sbjct: 4 IAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG 110
HL + D +++ A ++FH E+S + ++ I +G
Sbjct: 64 IHLATVNPDKFVDLYAAIKPAYMSFHVEASRDVNATINHIRELG 107
>gi|213423603|ref|ZP_03356583.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 179
Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------------GVAIN 118
++ + AG IT E H+ +L +G++T G+++
Sbjct: 84 VADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSW---LGQQTVPVIDGEMPVIRGISLC 140
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFG 146
P TP+ ++ ++ ++++I ++ VNPG+G
Sbjct: 141 PATPLDVIIPILSDVEVIQLLAVNPGYG 168
>gi|242309746|ref|ZP_04808901.1| ribulose-phosphate 3-epimerase [Helicobacter pullorum MIT 98-5489]
gi|239523747|gb|EEQ63613.1| ribulose-phosphate 3-epimerase [Helicobacter pullorum MIT 98-5489]
Length = 77
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVV 196
M+VNPGFGGQ+ I +T KI+ K +I + + +EVDGGV+ +NI L + G D++V
Sbjct: 1 MSVNPGFGGQKFIPNTFDKIKALKDMIESLNPNCLIEVDGGVSDKNIMELKKCGVDIVVA 60
Query: 197 GSSFFNQKGEISYAKRLNDLK 217
GS F+ +Y ++++ LK
Sbjct: 61 GSYIFSG----NYKEKISSLK 77
>gi|313631044|gb|EFR98638.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
Length = 70
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMASSIKEAELAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISS 73
HLMI +
Sbjct: 64 VHLMIEN 70
>gi|110224760|emb|CAL07980.1| ribulose-phosphate 3-epimerase [Platanus x acerifolia]
Length = 123
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ V+ +LR +D
Sbjct: 61 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITICPLVVDALRPVTDLP 120
Query: 65 FD 66
D
Sbjct: 121 LD 122
>gi|225554408|gb|EEH02706.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus G186AR]
Length = 86
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
M+L+MTV+PGFGGQ+ + S +PK+ + + +++EVDGG+ ++ +AGA+++
Sbjct: 1 MVLVMTVHPGFGGQKFMASELPKVNALR--VKYPHLNIEVDGGLGEDTVEQAAEAGANVI 58
Query: 195 VVGSSFFNQK 204
V GS+ F +
Sbjct: 59 VAGSAVFGAQ 68
>gi|4140462|gb|AAD04066.1| pentose-5-phosphate-3-epimerase [Chlamydia trachomatis]
Length = 82
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 84 AGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNP 143
AG D I H E++ +I+ + I G + GVA +PET + + I D+IL+M+V+P
Sbjct: 8 AGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVILLMSVHP 67
Query: 144 GFGGQQLIESTIPKI 158
GF GQ+ I TI +I
Sbjct: 68 GFCGQKFIPDTIERI 82
>gi|255027619|ref|ZP_05299605.1| hypothetical protein LmonocytFSL_16952 [Listeria monocytogenes FSL
J2-003]
Length = 104
Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 5 KIAASIMCADQLHLGDELQRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR 104
D HL + +I++ + I+FH E + + +R
Sbjct: 65 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEIIR 103
>gi|320526900|ref|ZP_08028090.1| putative ribulose-phosphate 3-epimerase [Solobacterium moorei
F0204]
gi|320132868|gb|EFW25408.1| putative ribulose-phosphate 3-epimerase [Solobacterium moorei
F0204]
Length = 238
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 11/217 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRSYSD 62
I+I + ++ +L + + AG IH D D + N+ G +I+++R
Sbjct: 4 IKIAAGLAHINYGKLTQLVKEAEAAGVDYIHSDAADMHDLQNMKLMGGWQIIQAIRPEVK 63
Query: 63 SVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINP 119
+CH+ S+D I I AG +++ E + + K G+ I
Sbjct: 64 IPVECHIYTVSMDKMFIEQIHSAGANMLIIPAEHFIGAQLTYIINWCRERKIKVGLTIGC 123
Query: 120 ETPVAILEDVIDEIDMILIMT----VNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLE 173
TP+ +E+ I +ID + I+T G S +R+A+ LI +++ L
Sbjct: 124 YTPLCFVEESIYDIDRLQIVTHGVDETDGADNWGWRRSVTDLVRRARKLIDEKNPKCELA 183
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+DGG+ N++ L++ D++V+ S+ F I+ A
Sbjct: 184 LDGGLRVDNMEPLIECNPDVIVMSSALFKDPDGITAA 220
>gi|166157045|emb|CAO79502.1| multifunctional protein [Ribulose-phosphate 3-epimerase ; unknown
domain] [uncultured candidate division WWE3 bacterium
EJ0ADIGA11YD11]
Length = 422
Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-F 65
I+P+IL D +I + + + D++D +P +F ++ L +V
Sbjct: 2 IIPAILEKDIKECERKIK-LVEDVCSAVQIDILDNTIIPGETFQD--LQKLEEIKTTVDM 58
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHI----------------RRSLRTIHAM 109
HLM+ IN I G P ++ I L+ +
Sbjct: 59 TIHLMVKD---PINFIRKLGF----LFPTNANRINGVSTLITQVVDKETTENFLKYAKDL 111
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ-AKALIGKR 168
G KTG++IN + +I+ ++I D++ M V PG G + + KI K GK
Sbjct: 112 GYKTGISINLDQDNSIISNLIQNADIVQFMGVEPGKQGGNFVPFVLEKISSFKKDFPGK- 170
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+ ++DGGV NI ++ + G + +V+GS+ FN
Sbjct: 171 --TFQIDGGVNESNILTVSETGVENIVIGSAIFN 202
>gi|169334965|ref|ZP_02862158.1| hypothetical protein ANASTE_01371 [Anaerofustis stercorihominis DSM
17244]
gi|169257703|gb|EDS71669.1| hypothetical protein ANASTE_01371 [Anaerofustis stercorihominis DSM
17244]
Length = 205
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI + D L +E + K + IH D+ DG + I+FG + + S + S
Sbjct: 3 ISPSIASGDALNLQKETEFVDKHFS-NIHMDIQDGVY-AKITFGMKTLEQVCSITTSKVS 60
Query: 67 CHLMISSIDSHINIIADA-GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
HL + ++ I+ DI+ H +R + G KTG+ ++ +
Sbjct: 61 VHLQVMDPLKYLKPISKMDNIDIVHIHINHLKDPKRVISAYKKAGIKTGIGLSNYDLDSN 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+ +D +L++T G L E +I K +I S+ + VDGG+ +
Sbjct: 121 TNKYFELVDSVLVLT---ACYGDPLQEYSIKMENYVKDIIDNTSLEMWVDGGIDLDRLTH 177
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRL 213
L + G D +V+G + F K YA ++
Sbjct: 178 LKEIGVDAVVLGRAVFGDK----YAAKM 201
>gi|213417853|ref|ZP_03350955.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 52
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFG 50
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIG 49
>gi|297840167|ref|XP_002887965.1| hypothetical protein ARALYDRAFT_893120 [Arabidopsis lyrata subsp.
lyrata]
gi|297333806|gb|EFH64224.1| hypothetical protein ARALYDRAFT_893120 [Arabidopsis lyrata subsp.
lyrata]
Length = 129
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTGVAINPETPVAILED 128
M+++ +++ +A AG T H E + + L I ++G + GVA+ P TPV
Sbjct: 1 MVTNPMDYVDQMAKAGASGFTLHVEVAKENWQELVENIKSVGMRPGVALKPGTPV----- 55
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLV 187
+ + + + P FGGQ+ + + + K+R AL K ++ +EVDGG+ I +
Sbjct: 56 -----EQVYPLVLKPRFGGQKFMPNMMDKVR---ALRNKYPTLDIEVDGGLGPSTIDAAA 107
Query: 188 QAGADLLVVGSSFFN 202
AGA+ +V GSS +N
Sbjct: 108 AAGANCIVAGSSVYN 122
>gi|148928000|ref|ZP_01811397.1| ribulose-phosphate 3-epimerase [candidate division TM7 genomosp.
GTL1]
gi|147886650|gb|EDK72223.1| ribulose-phosphate 3-epimerase [candidate division TM7 genomosp.
GTL1]
Length = 211
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 31 AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF--DCHLMISSIDSHINIIADAGCDI 88
A ++H D+MDG F P S I+ ++ + + D HLM +H+ + ++
Sbjct: 29 ASRVHIDLMDGEFAPVTS-----IKPIQVWWPEGWIADIHLMFQRPLAHLETLISLHPNM 83
Query: 89 ITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG-FGG 147
+ H E+ + L+ + + + GVA+ T + +I D +L+ + + G FGG
Sbjct: 84 VIIHAEAEGDLVGMLKHLQKLDIRAGVALLKPTEPKDAQKLIAVADHVLLFSGDLGHFGG 143
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
Q + + K+ + KA ++ + DGG + N+ L ++G D++ VG +
Sbjct: 144 QADL-GILKKVTEVKAF--NPNVDIGWDGGANASNVVQLTESGVDIINVGGA 192
>gi|255028945|ref|ZP_05300896.1| hypothetical protein LmonL_06726 [Listeria monocytogenes LO28]
Length = 55
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMK 55
>gi|213422638|ref|ZP_03355701.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 138
Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 89 ITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ 148
I H ES + L I A+G K G+A+NP TP+ + ++D ++IMT P GQ
Sbjct: 13 IFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRYLALQLDALMIMTSEPDGRGQ 72
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
Q I + K+ Q++ + DGG+T R + L AGA LV+G + F
Sbjct: 73 QFIAAMCEKVSQSREHF--PAAECWADGGITLRAARLLAAAGAQHLVIGRALFT 124
>gi|154484222|ref|ZP_02026670.1| hypothetical protein EUBVEN_01933 [Eubacterium ventriosum ATCC
27560]
gi|149734699|gb|EDM50616.1| hypothetical protein EUBVEN_01933 [Eubacterium ventriosum ATCC
27560]
Length = 104
Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+++++ +D ++IMTVNPGF GQ +E KI + K + VDGG++ IK
Sbjct: 13 VKNILHIVDYVMIMTVNPGFAGQSYLEYIDEKIEEFIQNRKKYHYEIVVDGGISEEKIKK 72
Query: 186 LVQAGADLLVVGSSFFNQKGE 206
L Q G ++G+S KG+
Sbjct: 73 LNQKGVKGFILGTSSLFGKGD 93
>gi|315305558|ref|ZP_07875282.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
gi|313626074|gb|EFR95482.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
Length = 57
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ +
Sbjct: 4 VAPSLLAADYMNMANSIKEAELAGADYLHIDVMDGHFVPNLTFGIDMVEQI 54
>gi|283769130|ref|ZP_06342034.1| ribulose-phosphate 3 epimerase family protein [Bulleidia extructa
W1219]
gi|283104106|gb|EFC05485.1| ribulose-phosphate 3 epimerase family protein [Bulleidia extructa
W1219]
Length = 239
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLR 58
M I+I + ++ +L + + AG IH D D + N+ G +I+++R
Sbjct: 1 MMKHIKIAAGLAHINYGKLTQLVREAEAAGVDYIHSDAADMHDLQNMKLMGGWQIIQAIR 60
Query: 59 SYSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGV 115
+CH+ S+D I I AG +++ E + + K G+
Sbjct: 61 PEVKIPVECHIYTVSMDKMFIEQIHAAGANMLIVPAEHFIGAQLTYIINWCRERNIKVGL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMT----VNPGFGGQQLIESTIPKIRQAKALIGKRS-- 169
I TP+ +E+ I +ID + I+T G S + +A+ LI +++
Sbjct: 121 TIGCYTPLCFVEESIYDIDRLQIVTHGVDETDGADNWGWRRSVTDLVVRARKLIDEKNPK 180
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
L +DGG+ + N++ L+ D++++ S+ F I+ A
Sbjct: 181 CELALDGGLRADNMEPLIACNPDVIIMSSAIFKDPEGITAA 221
>gi|170576514|ref|XP_001893659.1| hypothetical protein Bm1_10935 [Brugia malayi]
gi|158600208|gb|EDP37507.1| hypothetical protein Bm1_10935 [Brugia malayi]
Length = 125
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL +D S+L +E ++ + GA +H DVMDG FVPN++FG + + + V
Sbjct: 11 ICPSILNSDLSKLADECRSLLQFGADYLHLDVMDGQFVPNLTFGHPGQKFMSDMMEKV-- 68
Query: 67 CHLMISSIDSHINIIADAGCDI 88
++ S +NI D G ++
Sbjct: 69 --RILRSTHPFLNIQVDGGVNL 88
>gi|240047231|ref|YP_002960619.1| D-ribulose-5-phosphate 3 epimerase [Mycoplasma conjunctivae
HRC/581]
gi|239984803|emb|CAT04783.1| D-ribulose-5-phosphate 3 epimerase [Mycoplasma conjunctivae]
Length = 215
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS---LRSYSDSVFD 66
S+LA + + + ++ + K G K H D D + N FGA+ + ++ + + FD
Sbjct: 6 SVLALNIFKSLKILTKLQKYGLKYAHIDFADEIYAKN--FGANYEMTSYLVKLFPNIEFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHP------ESSPHIRRSLRTIHAMGKKTGVAINPE 120
HLM + I + G I F P E I++ I+ G +
Sbjct: 64 AHLMTKNPFEKIEKLVQIGIKTI-FIPIEFLTLEQLIFIKKQYPNIN-----FGAMLQAH 117
Query: 121 TPVAILEDVIDEIDMILIMTVNP-GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V ++I +I +IL+MT++ G GQ L + KI Q ++L K I + DGG+
Sbjct: 118 QEVQDFANIIAKIPIILVMTIDKIGGTGQPLNPKLLEKISQIRSLNSK--IKVYSDGGLR 175
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
N Q D+ + GS F+ +AK+
Sbjct: 176 KENWDLFEQFNVDVAIGGSIIFSYPNFSDFAKQW 209
>gi|312866448|ref|ZP_07726666.1| putative D-allulose-6-phosphate 3-epimerase [Streptococcus downei
F0415]
gi|311098142|gb|EFQ56368.1| putative D-allulose-6-phosphate 3-epimerase [Streptococcus downei
F0415]
Length = 118
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ + + +EI+ + A+ H D+MDG FVPNI I +R S
Sbjct: 3 TVHFSPSLMCMNLDKFTQEITFLNDH-AQSYHIDIMDGHFVPNIPLPPWFIGEVRKLSSL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTG 114
HLM++ ++ + CD I H E + R + IH G K G
Sbjct: 62 PMSAHLMVTDPTFWVDQLIAIKCDYICMHAEVINGLAFRLIDQIHEAGLKAG 113
>gi|70927745|ref|XP_736190.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56510516|emb|CAH82270.1| hypothetical protein PC000278.05.0 [Plasmodium chabaudi chabaudi]
Length = 96
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
ID +L+MTV PGFGGQ + + K+ + ++++++VDGG+ + GA+
Sbjct: 8 IDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQVDGGLNIETTEISASHGAN 65
Query: 193 LLVVGSSFFN 202
++V G+S FN
Sbjct: 66 IIVAGTSIFN 75
>gi|312866325|ref|ZP_07726543.1| D-allulose-6-phosphate 3-epimerase [Streptococcus downei F0415]
gi|311098019|gb|EFQ56245.1| D-allulose-6-phosphate 3-epimerase [Streptococcus downei F0415]
Length = 92
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVV 196
MTV+PGF GQ+ +EST+ KI Q + L ++ +E+DG + K + QA D+ V+
Sbjct: 1 MTVDPGFAGQRFLESTLDKIVQLRELRQEKGYHYLIEMDGSSNRKTFKCIDQANPDIYVI 60
Query: 197 GSS 199
G S
Sbjct: 61 GRS 63
>gi|116334978|ref|YP_802473.1| ribulose-phosphate 3-epimerase [Candidatus Carsonella ruddii PV]
gi|116235259|dbj|BAF35107.1| ribulose-phosphate 3-epimerase [Candidatus Carsonella ruddii PV]
Length = 173
Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 46/169 (27%)
Query: 29 AGAKQIHFDVMDGCFVPNISFGADVIRSLR---------SYSDSVFDCHLMISSIDSHIN 79
+ K HFD+M+ +V N SF + I S+ Y V +L++S ID +
Sbjct: 7 SKIKCYHFDLMEFSYVKNNSFSINEINSILLILSKIMNIKYEVHVMSKYLLLSKIDKN-- 64
Query: 80 IIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM 139
+S H+ + I+ + T N + ILIM
Sbjct: 65 --------------KSINHLENKMYKINNIALSTNFCWNYIKYF--------NYNNILIM 102
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS---RNIKS 185
+V PGFG Q+ + ST+ K+++ + +DGGV +NIK+
Sbjct: 103 SVIPGFGNQKFLISTLNKVKKK----------INIDGGVNCYIFKNIKN 141
>gi|289548482|ref|YP_003473470.1| ribulose-phosphate 3-epimerase [Thermocrinis albus DSM 14484]
gi|289182099|gb|ADC89343.1| ribulose-phosphate 3-epimerase [Thermocrinis albus DSM 14484]
Length = 52
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF 49
+L+AD LGE++ + K GA IH DVMDG FVP+I+F
Sbjct: 8 VLSADSWNLGEQVEAVVKGGADLIHLDVMDGRFVPDITF 46
>gi|331658048|ref|ZP_08359010.1| conserved hypothetical protein [Escherichia coli TA206]
gi|331056296|gb|EGI28305.1| conserved hypothetical protein [Escherichia coli TA206]
Length = 54
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+I R I +EVDGGV N+K + +AGADL+VVG + FN++ SY
Sbjct: 1 MISGRDIQIEVDGGVNLDNVKQVKEAGADLIVVGGALFNKQPHESY 46
>gi|309803239|ref|ZP_07697336.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 11V1-d]
gi|308164747|gb|EFO66997.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 11V1-d]
Length = 82
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVV 196
M+V PGFGGQ+ I KI K ++ + I LE+DGG+ + AGAD++V
Sbjct: 1 MSVQPGFGGQKFRNEVIDKIVFLKKMMANQGYVIPLEIDGGINDVTANKVKTAGADIVVA 60
Query: 197 GSSFF 201
GS F
Sbjct: 61 GSYIF 65
>gi|307278118|ref|ZP_07559202.1| conserved domain protein [Enterococcus faecalis TX0860]
gi|306505515|gb|EFM74701.1| conserved domain protein [Enterococcus faecalis TX0860]
Length = 84
Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 4 VEFSPSLMTMDLDKFKQQITFLNDHVAS-YHIDIMDGHYVPNITLSPWFIEELRKISKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGC 86
HLM+++ + + D C
Sbjct: 63 VSAHLMVTNPSFWVQQLVDIKC 84
>gi|169839827|ref|ZP_02873015.1| ribulose-phosphate 3-epimerase [candidate division TM7
single-cell isolate TM7a]
Length = 56
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 43 FVPNISFGADVIRSLRSYSDSVFDCHLMISSID 75
FVPNIS+GA VI SLR +S+ VFD HLM++ D
Sbjct: 1 FVPNISYGAPVISSLRKHSNLVFDVHLMVNEPD 33
>gi|329571355|gb|EGG53042.1| conserved domain protein [Enterococcus faecalis TX1467]
Length = 92
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 139 MTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
MTV+PGF GQ+ IE T+ KI R + G R + +E+DG + K + AG D+ +
Sbjct: 1 MTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYV-IEMDGSSNRNSFKRIDAAGPDIYI 59
Query: 196 VG-SSFFNQKGEISYAKRL 213
VG S F +I A R+
Sbjct: 60 VGRSGLFGLNEDIEKAWRM 78
>gi|86144656|ref|ZP_01062988.1| ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
gi|85837555|gb|EAQ55667.1| ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
Length = 80
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 153 STIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
S+ K+R ++ I + R+I LEVDGGV NIK + +AGAD+ V GS+ F+ +
Sbjct: 10 SSETKLRSIRSRINESGRNIRLEVDGGVKVNNIKEIAEAGADMFVAGSAIFDSE 63
>gi|297840163|ref|XP_002887963.1| hypothetical protein ARALYDRAFT_893114 [Arabidopsis lyrata subsp.
lyrata]
gi|297333804|gb|EFH64222.1| hypothetical protein ARALYDRAFT_893114 [Arabidopsis lyrata subsp.
lyrata]
Length = 75
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 10/66 (15%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDG-----C-----FVPNISFGADV 53
S +I PS+L++DF+ L E + GA +H D+M C FVPN++ GA V
Sbjct: 5 SPKIAPSMLSSDFANLEAEAKRMIDLGANWLHMDIMHAVGIIMCYSGKHFVPNLTIGAPV 64
Query: 54 IRSLRS 59
I SLR+
Sbjct: 65 IESLRN 70
>gi|218675914|ref|YP_002394733.1| hypothetical protein VS_II0131 [Vibrio splendidus LGP32]
gi|218324182|emb|CAV25407.1| Hypothetical protein VS_II0131 [Vibrio splendidus LGP32]
Length = 84
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 156 PKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
K+R ++ I + R+I LEVDGGV NIK + +AGAD+ V GS+ F+
Sbjct: 17 TKLRSIRSRINESGRNIRLEVDGGVKVNNIKEIAEAGADMFVAGSAIFD 65
>gi|26553898|ref|NP_757832.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma penetrans HF-2]
gi|26453905|dbj|BAC44236.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma penetrans HF-2]
Length = 212
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 5 IQIVPSILA-ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIR----SLRS 59
+ I PS+ A DF+ E I I K G IH D MD + ++++ S+R
Sbjct: 2 VDITPSLKAIKDFNYF-EWIKKIEKTGINSIHLDFMDCTRTKDFGLSFEILKYIDPSIRK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D H+M+ I+ I I H + + + + + KTG+ I+
Sbjct: 61 ------DLHIMVDDAYRLIDFIPKVENVYIHTHYDMVKDWEKFIEKTNKLNFKTGITIDL 114
Query: 120 E-TPVAILEDVIDEIDMILIMTVNP-GFGGQQLIESTIPKIRQ-AKALIGKRSISLEVDG 176
L+ I +ID+I M V G G++ + +++ K+ + L+VDG
Sbjct: 115 NFRHFEKLKSFISKIDLINFMAVETIGNTGEKFDNKVLLNVKKIIDEFPLKKDVILQVDG 174
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V +++ + + +VVGS F KRL +L+K
Sbjct: 175 SVREQHLAD-CKKYFNSIVVGSILFEFD---DLEKRLFELQK 212
>gi|9187987|emb|CAB97126.1| putative ribulose-phosphate 3-epimerase [Daucus carota]
Length = 42
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 29 AGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
AG IH DVMDG FVPNI+ G V+ +LR +D D HL+
Sbjct: 1 AGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLV 42
>gi|327405588|ref|YP_004346426.1| CBS domain-containing protein [Fluviicola taffensis DSM 16823]
gi|327321096|gb|AEA45588.1| CBS domain containing protein [Fluviicola taffensis DSM 16823]
Length = 333
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 78/198 (39%), Gaps = 12/198 (6%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SI + L E I ++ +H D D P++ D IR +RS+ +
Sbjct: 1 MRISASIYSDKKRDLSETIQDLAAHHVDLLHVDCNDN---PSV---FDDIRQIRSWCNIP 54
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H++ + + +++ + + +TF E + L + K G+ I T V
Sbjct: 55 IDLHIITKNPSKYYDLLREVPVEYVTFQLED---LEEELVIPSDITGKKGLGIITPTSVE 111
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
D D IL+M PG G KIR + +S+ VDGGV
Sbjct: 112 SF-DKYGNFDFILMMATVPGQSGGVFDAVNFKKIRDFQHKYPSKSV--HVDGGVNGEVSF 168
Query: 185 SLVQAGADLLVVGSSFFN 202
L G V GS FN
Sbjct: 169 ILRNMGVHTSVSGSYLFN 186
>gi|153841973|ref|ZP_01993457.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AQ3810]
gi|149745424|gb|EDM56675.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AQ3810]
Length = 65
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
R I LE+DGGV NI+ + +AGAD+ V GS+ F+Q
Sbjct: 12 RDIRLEIDGGVKVDNIREIAEAGADMFVAGSAIFSQ 47
>gi|71893911|ref|YP_279357.1| putative d-ribulose-5-phosphate 3 epimerase [Mycoplasma
hyopneumoniae J]
gi|72080888|ref|YP_287946.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma hyopneumoniae 7448]
gi|71852038|gb|AAZ44646.1| putative d-ribulose-5-phosphate 3 epimerase [Mycoplasma
hyopneumoniae J]
gi|71914012|gb|AAZ53923.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma hyopneumoniae 7448]
Length = 218
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 9/216 (4%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVFDCH 68
SI A + ++ + ++ + G K H D +D + PN + L + + + FD H
Sbjct: 7 SISALNIFKVIKILTKLHNNGLKYAHIDFVDQIYAPNFGLNYQIANYLIKLFPNIEFDAH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
LM + + + G I E S +R ++ + G+ I +
Sbjct: 67 LMCKNSLEKVEKLIQIGFKTIFLPAEQVSKTDFKRLNKSYSNIN--FGLMIQANQKIEDF 124
Query: 127 EDVIDEIDMILIMTVNP-GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
++I ++IL+MT++ G G+ L + KI + +++ + I + DGG+ N
Sbjct: 125 CEIISCSNVILLMTIDKIGGVGEPLNQQLFLKIGEIRSI--NKKIKIYTDGGLRKENWIE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ D+++ GS F+ S RL +K+AL
Sbjct: 183 FEKWNVDVVIGGSIIFSYPN-FSEFSRLWGNQKNAL 217
>gi|54020595|ref|YP_116085.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 232]
gi|53987768|gb|AAV27969.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 232]
Length = 218
Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 9/216 (4%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVFDCH 68
SI A + ++ + ++ + G K H D +D + PN + L + + + FD H
Sbjct: 7 SISALNIFKVIKILTKLHNNGLKYAHIDFVDQIYAPNFGLNYQIANYLIKLFPNIEFDAH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
LM + + + G I E S R ++ + G+ I +
Sbjct: 67 LMCKNSLEKVEKLIQIGFKTIFLPAEQVSKTDFERLNKSYSNIN--FGLMIQANQKIEDF 124
Query: 127 EDVIDEIDMILIMTVNP-GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
++I ++IL+MT++ G G+ L + KI + +++ + I + DGG+ N
Sbjct: 125 CEIISCSNVILLMTIDKIGGVGEPLNQQLFLKIGEIRSI--NKKIKIYTDGGLRKENWIE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ D+++ GS F+ S RL +K+AL
Sbjct: 183 FKKWNVDVVIGGSIIFSYPN-FSKFSRLWGNQKNAL 217
>gi|312601510|gb|ADQ90765.1| D-ribulose-5-phosphate 3 epimerase [Mycoplasma hyopneumoniae 168]
Length = 217
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 9/216 (4%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVFDCH 68
SI A + ++ + ++ + G K H D +D + PN + L + + + FD H
Sbjct: 6 SISALNIFKVIKILTKLHNNGLKYAHIDFVDQIYAPNFGLNYQIANYLIKLFPNIEFDAH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
LM + + + G I E S +R ++ + G+ I +
Sbjct: 66 LMCKNSLEKVEKLIQIGFKTIFLPAEQVSKTDFKRLNKSYSNIN--FGLMIQANQKIEDF 123
Query: 127 EDVIDEIDMILIMTVNP-GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
++I + IL+MT++ G G+ L + KI + +++ + I + DGG+ N
Sbjct: 124 CEIISCSNAILLMTIDKIGGVGEPLNQQLFLKIGEIRSI--NKKIKIYTDGGLRKENWIE 181
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ D+++ GS F+ S RL +K+AL
Sbjct: 182 FEKWNVDVVIGGSIIFSYPN-FSEFSRLWGNQKNAL 216
>gi|225629625|ref|ZP_03787630.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591521|gb|EEH12556.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 63
Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
STI K+ Q + L K IS VDGG+ S N +++AGAD+LV GS+ F K E K
Sbjct: 2 STIKKMIQERNL--KTQIS--VDGGINSFNAADIIKAGADILVAGSAIF--KAE-DIKKA 54
Query: 213 LNDLKKSAL 221
+NDLK +L
Sbjct: 55 VNDLKNPSL 63
>gi|207110643|ref|ZP_03244805.1| ribulose-phosphate 3-epimerase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 40
Score = 43.5 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPN 46
+++ PS+L+ADF L EEI +++ A +H DVMDG +VPN
Sbjct: 1 MKVAPSLLSADFMHLAEEIESVSNADF--LHVDVMDGHYVPN 40
>gi|308273080|emb|CBX29684.1| Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
[uncultured Desulfobacterium sp.]
Length = 275
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+P+I++A ALI K+++ +E+ GGVT N+ SL+ GAD++ VG+
Sbjct: 217 VPQIKEAVALIDKKAV-VEISGGVTRENLGSLIDTGADIVSVGA 259
>gi|213621058|ref|ZP_03373841.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 109
Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT------------ 113
D HLM++ + AG IT E H+ +L +G++T
Sbjct: 4 DVHLMVADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSW---LGQQTVPVIDGEMPVIR 60
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ 148
G+++ P TP+ ++ ++ ++++I ++ VNPG+G +
Sbjct: 61 GISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 95
>gi|218281469|ref|ZP_03487912.1| hypothetical protein EUBIFOR_00477 [Eubacterium biforme DSM 3989]
gi|218217391|gb|EEC90929.1| hypothetical protein EUBIFOR_00477 [Eubacterium biforme DSM 3989]
Length = 222
Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 83 DAGCDIITF----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
+AG DI T H E+ I+ +R+ GKK V + V L+ +EID + +
Sbjct: 89 EAGADICTVLGVSHDET---IQGVVRSAKKYGKKVMVDM---IAVPDLKKRTEEIDQMGV 142
Query: 139 --MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
+ V+ F Q+L + + ++ ++I ++ V GGV + ++V GA+++VV
Sbjct: 143 DYICVHTAFDVQKLGQDPLNDLKTVNSVI--KNAKSAVAGGVKLETVDAIVNEGAEIIVV 200
Query: 197 GSSFFNQKGEISYAKRLN 214
G + N K +YAK +
Sbjct: 201 GGAICNAKDRQAYAKEIK 218
>gi|169334398|ref|ZP_02861591.1| hypothetical protein ANASTE_00798 [Anaerofustis stercorihominis DSM
17244]
gi|169259115|gb|EDS73081.1| hypothetical protein ANASTE_00798 [Anaerofustis stercorihominis DSM
17244]
Length = 209
Score = 41.6 bits (96), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
Query: 79 NIIADAGCDIIT-FHPESSPHIRRSLRTIHAMGKKTGVAI----NPETPVAILEDVIDEI 133
I DAG DI+T + I SL+ + GK+ V + + E V+ LE + +
Sbjct: 72 KIALDAGADIVTVLAAADNQTIEDSLKAVKEAGKELLVDLICVHDFEERVSYLEKI--GV 129
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
D I + T G Q+L + + + K L+ +S V GGV +KS+ D+
Sbjct: 130 DYICVHT---GSDTQKLGANPLKDLITVKKLVKNTKVS--VAGGVKVDTVKSISDENPDV 184
Query: 194 LVVGSSFFNQKGEISYAKRLNDLKK 218
++VG +N + AK++ D+ K
Sbjct: 185 IIVGGGLYNAENPAETAKKMVDIIK 209
>gi|313610547|gb|EFR85673.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL
F2-208]
Length = 41
Score = 41.2 bits (95), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFV 44
+IVPS+ AD R+ E++ + K G +H D+MDG FV
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFV 41
>gi|309777352|ref|ZP_07672313.1| 3-hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914893|gb|EFP60672.1| 3-hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
3_1_53]
Length = 217
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 83 DAGCDIIT-FHPESSPHIRRSLRTIHAMGKKTGV-AINPETPVAILEDVIDEI--DMILI 138
+AG DI+T I+ + HA G+KT V IN + V+ ++ ID + D I +
Sbjct: 75 EAGADIVTVLAAADDATIQGVIDKTHANGRKTLVDLINVQDVVSRAQE-IDRMGADYICV 133
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
T + Q + + ++R+ KA++ + L GG+ I ++QAGAD++++GS
Sbjct: 134 HTASDV---QATGRNPLEELRKIKAVV--KDAHLAAAGGINEETIADIMQAGADIVIIGS 188
Query: 199 SFFNQKGEISYAKRLNDLKKS 219
+ ++ + A+R K+
Sbjct: 189 AITKKEDPVKEAERYKRYMKA 209
>gi|294494919|ref|YP_003541412.1| 3-hexulose-6-phosphate synthase [Methanohalophilus mahii DSM 5219]
gi|292665918|gb|ADE35767.1| 3-hexulose-6-phosphate synthase [Methanohalophilus mahii DSM 5219]
Length = 392
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNIS-FGADVIRSLRSYSDSVFDCHLMISSIDS--- 76
E + N+ + K H + G P I +G DVI LR F + ++D+
Sbjct: 185 EAVLNVVRQLPKSDHLILEAGT--PLIKRYGVDVITKLREVKPDAF-IVADLKTLDTGNL 241
Query: 77 HINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGV-----AINPETPVAILE--- 127
++ADA D I + P + +++ H KTG+ +N P+A+L+
Sbjct: 242 EARMVADATADAIVVSALAPIPTLEKAISEAH----KTGIYAVMDTLNQPDPMAVLKELN 297
Query: 128 ---DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
DV++ I + +G I+ PKI A V GGV I
Sbjct: 298 ELPDVVELHRAIDVEDTAYAWGSIDAIKELSPKILVA------------VAGGVRVHTIP 345
Query: 185 SLVQAGADLLVVGSSFFNQK 204
++AGAD+LVVG + N K
Sbjct: 346 DALKAGADILVVGRAITNSK 365
>gi|73666639|ref|YP_302655.1| nicotinate-nucleotide pyrophosphorylase [carboxylating] [Ehrlichia
canis str. Jake]
gi|72393780|gb|AAZ68057.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Ehrlichia
canis str. Jake]
Length = 275
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 34/149 (22%)
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+Y +S++D L+ D+HI A C IT + +R +L+ + VAI
Sbjct: 150 ENYRNSLYDGVLIK---DNHI-----ASCGSITLAIQ---RLRMNLKNAY-------VAI 191
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+ I E + + +DMIL+ + +I +I+QA ++ +S+ LEV G
Sbjct: 192 ECDNISQIEESLSNNVDMILLDNM------------SIGEIKQAVEIVNGKSV-LEVSGC 238
Query: 178 VTSRNIKSLVQAGADLLVVG---SSFFNQ 203
V RN++S+ G D + +G +SF N+
Sbjct: 239 VNIRNVRSIALTGVDYISIGCITNSFKNK 267
>gi|213026449|ref|ZP_03340896.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 75
Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I LEVDGGV NI + AGAD+ V GS+ F++ Y K +++++
Sbjct: 22 IRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDKP---DYKKVIDEMR 66
>gi|296040829|gb|ADG85382.1| ribulose-phosphate 3-epimerase [Spartina alterniflora]
Length = 42
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ + AG IH DVMDG FVPNI+ G ++ +LR +D
Sbjct: 1 VKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTD 40
>gi|406423|gb|AAD12467.1| unknown [Mycoplasma genitalium]
Length = 88
Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 89 ITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
I+FH P S I+ ++ + GK+ G+A T + + + ID I +M+V PG G
Sbjct: 17 ISFHVEPFSFAKIKELIQLVKENGKEVGLAFKFTTNLQLYQPFFTTIDFITLMSVPPGKG 76
Query: 147 GQQLIESTI 155
GQ E+
Sbjct: 77 GQAFNEAVF 85
>gi|72163282|ref|YP_290939.1| L-aspartate oxidase [Thermobifida fusca YX]
gi|71917014|gb|AAZ56916.1| L-aspartate oxidase / nicotinate-nucleotide pyrophosphorylase
(carboxylating0 [Thermobifida fusca YX]
Length = 867
Score = 39.3 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLI--ESTIPKIRQAKALIGKRSISLEVDG 176
P+ P+ + D ID+I+ L G ++++ T+P++R+A AL+ R+ LE G
Sbjct: 775 PDIPLEVEVDRIDQIEPAL------AAGAEEILLDNFTVPELREAVALVAGRA-RLEASG 827
Query: 177 GVTSRNIKSLVQAGADLLVVGS 198
G+T + G D L VG+
Sbjct: 828 GLTLDRAADVAATGVDYLAVGA 849
>gi|147920721|ref|YP_685475.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [uncultured methanogenic archaeon RC-I]
gi|121690520|sp|Q0W644|FAEHP_UNCMA RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|110620871|emb|CAJ36149.1| formaldehyde activating hexulose-6-phosphate synthase [uncultured
methanogenic archaeon RC-I]
Length = 396
Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
IP+I++A G + + + V GGV N+++ ++ GAD+LVVG S N K
Sbjct: 322 NIPEIKKAA---GGKKLLVAVAGGVKVENVETALKGGADILVVGRSITNAK 369
>gi|302037067|ref|YP_003797389.1| nicotinate-nucleotide diphosphorylase [Candidatus Nitrospira
defluvii]
gi|300605131|emb|CBK41464.1| Nicotinate-nucleotide diphosphorylase (carboxylating) [Candidatus
Nitrospira defluvii]
Length = 293
Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+RQA ALI KR++ +EV GG+T + + + QAG D + VG+
Sbjct: 229 VRQAVALIKKRAL-VEVSGGITLQTVAGMAQAGVDFISVGA 268
>gi|332295344|ref|YP_004437267.1| Thiamine-phosphate pyrophosphorylase [Thermodesulfobium narugense
DSM 14796]
gi|332178447|gb|AEE14136.1| Thiamine-phosphate pyrophosphorylase [Thermodesulfobium narugense
DSM 14796]
Length = 335
Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ S+N K + AGAD + VGS F++ K I KRL
Sbjct: 289 GGINSKNAKEVFNAGADGICVGSGFWHAKDRIEEIKRL 326
>gi|91773931|ref|YP_566623.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanococcoides burtonii DSM 6242]
gi|121686647|sp|Q12UK3|FAEHP_METBU RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|91712946|gb|ABE52873.1| Fae/hps bifunctional enzyme [Methanococcoides burtonii DSM 6242]
Length = 396
Score = 38.5 bits (88), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 84/208 (40%), Gaps = 33/208 (15%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNIS-FGADVIRSLRSYSDSVFDCHLMISSIDS---HI 78
I NI K K H + G P I +G DVI +R F + ++D+
Sbjct: 187 ILNIIKQLPKSDHLILEAGT--PLIKRYGVDVISKIREVRPDAFIVADL-KTLDTGNLEA 243
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV-----AINPETPVAILE------ 127
++ADA D I S+ +L + KTG+ +N PVA+LE
Sbjct: 244 RMVADATADAIVV---SALAPIATLNKVIEEAHKTGIYAVMDTLNTPDPVAVLEQLDVLP 300
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKS 185
DV++ I I +G I KAL KRS + + V GGV I
Sbjct: 301 DVVELHRAIDIEGTAHAWGS----------IEGIKALAVKRSSKVLVAVAGGVRVDTISD 350
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGAD+LVVG + N K A R
Sbjct: 351 ALGAGADILVVGRAITNSKDVRQAADRF 378
>gi|7649308|gb|AAF65844.1|AF255725_1 ribulose-5-phosphate-3-epimerase [Pisum sativum]
Length = 54
Score = 38.5 bits (88), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINP 119
LMI D + AG DII+ H E S H+ R++ + ++G K GV +NP
Sbjct: 1 LMIVEPDQRVPDFIKAGADIISVHCEQSSTIHLHRAVNQVKSLGSKAGVVLNP 53
>gi|62738756|pdb|1YTD|A Chain A, Crystal Structure Of A Nicotinate
Phosphoribosyltransferase From Thermoplasma Acidophilum,
Native Structure
gi|62738757|pdb|1YTE|A Chain A, Crystal Structure Of A Nicotinate
Phosphoribosyltransferase From Thermoplasma Acidophilum,
Phosphoribosylpyrophosphate Bound Structure
gi|62738758|pdb|1YTK|A Chain A, Crystal Structure Of A Nicotinate
Phosphoribosyltransferase From Thermoplasma Acidophilum
With Nicotinate Mononucleotide
gi|114794692|pdb|2I1O|A Chain A, Crystal Structure Of A Nicotinate
Phosphoribosyltransferase From Thermoplasma Acidophilum
Length = 398
Score = 38.1 bits (87), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
++ D++D I + T + G E+ I ++R AL G+ I + V GG+ +K L
Sbjct: 232 EMFDKVDYIRLDTPSSRRGN---FEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLR 288
Query: 188 QAGADLLVVGSSFFNQK 204
+AGA+ VG+S + K
Sbjct: 289 EAGAEAFGVGTSISSAK 305
>gi|16082162|ref|NP_394603.1| nicotinate phosphoribosyltransferase [Thermoplasma acidophilum DSM
1728]
gi|10640457|emb|CAC12271.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 392
Score = 38.1 bits (87), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
++ D++D I + T + G E+ I ++R AL G+ I + V GG+ +K L
Sbjct: 226 EMFDKVDYIRLDTPSSRRGN---FEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLR 282
Query: 188 QAGADLLVVGSSFFNQK 204
+AGA+ VG+S + K
Sbjct: 283 EAGAEAFGVGTSISSAK 299
>gi|300709415|ref|YP_003735229.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Halalkalicoccus
jeotgali B3]
gi|299123098|gb|ADJ13437.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Halalkalicoccus
jeotgali B3]
Length = 242
Score = 38.1 bits (87), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 31/198 (15%)
Query: 28 KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM--ISSIDSHINIIADAG 85
+AGA+ +H +DG F A V L + DS L I + + I ++ D G
Sbjct: 44 EAGARTLHLVDLDGAFEGERENAAAVAAVLETV-DSELAVQLGGGIRTAEDAIELL-DRG 101
Query: 86 CD--IITFHPESSPHIRRSLRTIH----------------AMGKKTGVAINPETPVAILE 127
D I+ SP I R + H G G ++P A E
Sbjct: 102 VDRVILGTAAVESPEIVREISEEHENSVMVGLDAKEGEVVVSGWTEGTGLDPAEVAARYE 161
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS-RNIKSL 186
E+ I+ N GQ T P R A+A+ SI + GGV S +I++L
Sbjct: 162 ----ELGAGAILFTNVDVEGQLEGVKTDPVERVAEAV----SIPVVASGGVASLDDIRAL 213
Query: 187 VQAGADLLVVGSSFFNQK 204
AGAD +VVG++ + +
Sbjct: 214 KAAGADAVVVGTALYEGR 231
>gi|313904375|ref|ZP_07837752.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Eubacterium cellulosolvens 6]
gi|313470711|gb|EFR66036.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Eubacterium cellulosolvens 6]
Length = 268
Score = 38.1 bits (87), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ QAKA +G S L++ GG+ + N ++AGA ++V S F + G+ISY
Sbjct: 71 LEQAKAALGAWSGGLQIGGGIHADNAAEFLEAGASHVIVTSYVF-KNGQISY 121
>gi|262273798|ref|ZP_06051611.1| quinolinate phosphoribosyltransferase [decarboxylating] [Grimontia
hollisae CIP 101886]
gi|262222213|gb|EEY73525.1| quinolinate phosphoribosyltransferase [decarboxylating] [Grimontia
hollisae CIP 101886]
Length = 301
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
T +NP PV + + +DE L ++ G L T +R+A AL K ++L
Sbjct: 206 TAKQLNPGKPVEVETESLDE----LQQAIDAGADIVMLDNFTTEMMREAVAL-NKGRVAL 260
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGS 198
EV G VT I+ Q G D + VG+
Sbjct: 261 EVSGNVTLDTIRGFAQTGVDYISVGA 286
>gi|40074227|gb|AAR39392.1| 3-hexulose-6-phosphate synthase [Bacillus methanolicus MGA3]
Length = 211
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 85 GCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI--MTV 141
G DI+T + I+ ++ +GKK V + V LE+ ++D + + + V
Sbjct: 77 GADIVTILAAAEDVSIKGAVEEAKKLGKKILVDM---IAVKNLEERAKQVDEMGVDYICV 133
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ G+ Q + ++ + +++ KA++ ++ + GG+ + +++A DL++VG
Sbjct: 134 HAGYDLQAVGKNPLDDLKRIKAVV--KNAKTAIAGGIKLETLPEVIKAEPDLVIVGGGIA 191
Query: 202 NQKGEISYAKRLNDLKKSAL 221
NQ + + A+++N L K L
Sbjct: 192 NQTDKKAAAEKINKLVKQGL 211
>gi|330467267|ref|YP_004405010.1| mandelate racemase/muconate lactonizing protein [Verrucosispora
maris AB-18-032]
gi|328810238|gb|AEB44410.1| mandelate racemase/muconate lactonizing protein [Verrucosispora
maris AB-18-032]
Length = 355
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 160 QAKALIGKRSISLEVDGGVTS-----RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
Q G +I L VDG +++ ++++S V AG DL+V + ++++G ++ A+ L+
Sbjct: 128 QEAVAAGYTAIKLRVDGDLSAAVHLVQSVRSAVGAGVDLMVDANMAYHRRGALTLARELH 187
Query: 215 DLKKSAL 221
DL+ + L
Sbjct: 188 DLQVAWL 194
>gi|73663757|ref|YP_302537.1| 3-hexulose-6-phosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72496327|dbj|BAE19592.1| putative truncated 3-hexulose-6-phosphate synthase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 97
Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+D++D I V+ G+ Q +S + +R+ K++I ++ V GG+ IK +V
Sbjct: 7 LDDLDADYI-AVHTGYDLQAEGQSPLESLRKVKSVISNSKVA--VAGGIKPDTIKDIVAE 63
Query: 190 GADLLVVGSSFFNQKGEISYAKRLNDL 216
DL++VG N + AK+ D+
Sbjct: 64 NPDLIIVGGGIANADDPVEAAKQCRDI 90
>gi|123442893|ref|YP_001006868.1| hypothetical protein YE2677 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089854|emb|CAL12710.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 279
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV-----------AINPETPVAIL 126
I +IA +G D + H S ++ + H G I ETP +
Sbjct: 125 ILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPAEVA 184
Query: 127 E--DVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGGVTS 180
E ++E +DMI +MT G + + IP + + + AL+G S+ +GG+
Sbjct: 185 EVAKKMEELGVDMIGLMT---GMSYEGVSAGDIPDVIKQRLLALVGAVSVPTLAEGGINL 241
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
N K+ G ++LVVG++ N
Sbjct: 242 ENAKAFKNTGVNILVVGTAIDN 263
>gi|154309193|ref|XP_001553931.1| hypothetical protein BC1G_07491 [Botryotinia fuckeliana B05.10]
gi|150852534|gb|EDN27726.1| hypothetical protein BC1G_07491 [Botryotinia fuckeliana B05.10]
Length = 526
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
+ S + + I +G DI P S IR +R MGK +GV I PE +L+DVI
Sbjct: 402 LQSRNEKLAEILSSGSDISAAGPAFSA-IREKIRE---MGKLSGVPIEPEEQTKLLDDVI 457
Query: 131 DEIDMILIMTVNPGFGGQQLI 151
+ ++ + I V PG GG I
Sbjct: 458 ENVEGV-IGGVVPGAGGYDAI 477
>gi|317046914|ref|YP_004114562.1| nicotinate-nucleotide pyrophosphorylase [Pantoea sp. At-9b]
gi|316948531|gb|ADU68006.1| nicotinate-nucleotide pyrophosphorylase [Pantoea sp. At-9b]
Length = 298
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
+ + + P+ PV + + +DE+ L G L T+ +R+A AL +R++
Sbjct: 200 EKALWLQPDVPVEVEVETLDELQAAL----AAGADIVMLDNFTLEMMRKAAALTQRRAL- 254
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGS 198
LEV G VT+ + + Q G D + VG+
Sbjct: 255 LEVSGNVTAATLPQIAQTGVDYVSVGA 281
>gi|322834401|ref|YP_004214428.1| nicotinate-nucleotide pyrophosphorylase [Rahnella sp. Y9602]
gi|321169602|gb|ADW75301.1| nicotinate-nucleotide pyrophosphorylase [Rahnella sp. Y9602]
Length = 297
Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
+ I+ + PV + + +DE+ L + G L T+P +R+ AL R++ LEV
Sbjct: 204 LWIHADVPVEVEVESMDELQQAL----DAGADIIMLDNFTVPMMREGVALTAGRAL-LEV 258
Query: 175 DGGVTSRNIKSLVQAGADLLVVGS 198
G VT + ++ + G D + VG+
Sbjct: 259 SGNVTEKTLREFAETGVDYISVGA 282
>gi|253988611|ref|YP_003039967.1| quinolinate phosphoribosyltransferase [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253780061|emb|CAQ83222.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Photorhabdus asymbiotica]
Length = 296
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+P+ PV I + +DE LI+ + L TIP +++A A+ + ++LEV G
Sbjct: 206 HPDVPVEIEVETLDE----LILALKANVDIIMLDNFTIPMMKEAVAITSGK-VALEVSGN 260
Query: 178 VTSRNIKSLVQAGADLLVVGS 198
+T ++S + G D + VG+
Sbjct: 261 ITLNTLRSYAETGIDFISVGA 281
>gi|330860656|emb|CBX70951.1| unknown protein [Yersinia enterocolitica W22703]
Length = 279
Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV-----------AINPETPVAIL 126
I +IA +G D + H S ++ + H G I ETP +
Sbjct: 125 ILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPAEVA 184
Query: 127 E--DVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGGVTS 180
E ++E +DMI +MT G + + IP + + + AL+G S+ +GG+
Sbjct: 185 EVAKKMEELGVDMIGLMT---GMSYEGVGAGDIPDVIKQRLLALVGAVSVPTLAEGGINL 241
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
N K+ G ++LVVG++ N
Sbjct: 242 ENAKAFKNTGVNILVVGTAIDN 263
>gi|329929833|ref|ZP_08283509.1| N-(5'phosphoribosyl)anthranilate isomerase [Paenibacillus sp. HGF5]
gi|328935811|gb|EGG32272.1| N-(5'phosphoribosyl)anthranilate isomerase [Paenibacillus sp. HGF5]
Length = 224
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE----ID 134
++ D++ H + SP R ++ + V+I + P A +D ID
Sbjct: 76 ELLQKTALDVVQLHGQESPQFCREVKERFPVSVFKAVSIGSDRPEAERLSALDSYAGCID 135
Query: 135 MILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
++LI T +P +G G+ IP +Q ++ I L V GG+ N+ L+
Sbjct: 136 VLLIDTYDPMYGGGSGKTFAWDLIPAYQQWAE---RQGIPLFVAGGLDPDNVAHLI 188
>gi|296447567|ref|ZP_06889489.1| nicotinate-nucleotide pyrophosphorylase [Methylosinus trichosporium
OB3b]
gi|296254955|gb|EFH02060.1| nicotinate-nucleotide pyrophosphorylase [Methylosinus trichosporium
OB3b]
Length = 282
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
P +R+A ALIG R I+ E GGVT I ++ + G DL+ VG+
Sbjct: 226 PLLREAVALIGGRMIA-EASGGVTLETIAAIAETGVDLVSVGA 267
>gi|332157953|ref|YP_004423232.1| tryptophan synthase subunit alpha [Pyrococcus sp. NA2]
gi|331033416|gb|AEC51228.1| tryptophan synthase subunit alpha [Pyrococcus sp. NA2]
Length = 248
Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 21/181 (11%)
Query: 32 KQIHFDVMDGCFVPNISFGADVIRSLRSYSDS-----VFDCHLMISSIDSHINIIADAGC 86
++ H+ + F +F D++R+ R +SD + + + + I DAG
Sbjct: 52 QKSHYRALKNGFRLEDAF--DIVRNFRKHSDKPIVLMTYYNPVYRTGLRRFIEKAKDAGV 109
Query: 87 DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID-----MILIMTV 141
D + H + + G KT P TP ++ + EID + ++++
Sbjct: 110 DGMLIVDLPVLHSQEFVNVAREEGMKTVFLAAPNTP----DERLREIDRVTTGFVYLISL 165
Query: 142 NPGFGGQQLI-ESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSS 199
G ++ I E+ +++A+ + + L V GV+ R ++K L++AGAD +VVGS+
Sbjct: 166 YGTTGARERIPETAFNLLKRARKICRNK---LAVGFGVSKREHVKMLLEAGADGVVVGSA 222
Query: 200 F 200
Sbjct: 223 L 223
>gi|332161233|ref|YP_004297810.1| hypothetical protein YE105_C1611 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318605129|emb|CBY26627.1| hypothetical protein Y11_15541 [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665463|gb|ADZ42107.1| hypothetical protein YE105_C1611 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 266
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV-----------AINPETPVAIL 126
I +IA +G D + H S ++ + H G I ETP +
Sbjct: 112 ILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPAEVA 171
Query: 127 E--DVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGGVTS 180
E ++E +DMI +MT G + + IP + + + AL+G S+ +GG+
Sbjct: 172 EVAKKMEELGVDMIGLMT---GMSYEGVGAGDIPDVIKQRLLALVGAVSVPTLAEGGINL 228
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
N K+ G ++LVVG++ N
Sbjct: 229 ENAKAFKNTGVNILVVGTAIDN 250
>gi|73663457|ref|YP_302238.1| hexulose-6-phosphate synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119370764|sp|Q49VB7|HPS3_STAS1 RecName: Full=3-hexulose-6-phosphate synthase 3; Short=HPS 3;
AltName: Full=D-arabino-3-hexulose-6-phosphate
formaldehyde lyase 3
gi|72495972|dbj|BAE19293.1| putative hexulose-6-phosphate synthase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 210
Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 85 GCDIIT-FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI--LIMTV 141
G D++T I+ ++ H GK+ V + V L+ E+D + + V
Sbjct: 77 GADVVTILGVAEDASIKGAVEEAHKNGKELLVDM---IAVQDLQKRAKELDELGADYIAV 133
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ G+ Q ES + +RQ K++I ++ V GG+ IK +V DL+VVG
Sbjct: 134 HTGYDLQAEGESPLESLRQVKSVINNSKVA--VIGGIKPDTIKEVVAEEPDLVVVGGGIA 191
Query: 202 NQKGEISYAKRLND 215
N ++ AK D
Sbjct: 192 NADDPVAAAKACKD 205
>gi|218259990|ref|ZP_03475475.1| hypothetical protein PRABACTJOHN_01136 [Parabacteroides johnsonii
DSM 18315]
gi|218224810|gb|EEC97460.1| hypothetical protein PRABACTJOHN_01136 [Parabacteroides johnsonii
DSM 18315]
Length = 55
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+EVDGGV + K L++ GAD+LV GS F + + L +L
Sbjct: 11 IEVDGGVNMQTAKPLLEVGADVLVAGSFVFRSPDPLKTIRELKEL 55
>gi|238761168|ref|ZP_04622145.1| hypothetical protein ykris0001_35190 [Yersinia kristensenii ATCC
33638]
gi|238761421|ref|ZP_04622397.1| hypothetical protein ykris0001_21600 [Yersinia kristensenii ATCC
33638]
gi|238700395|gb|EEP93136.1| hypothetical protein ykris0001_21600 [Yersinia kristensenii ATCC
33638]
gi|238700648|gb|EEP93388.1| hypothetical protein ykris0001_35190 [Yersinia kristensenii ATCC
33638]
Length = 279
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV-----------AINPETP--VA 124
I +IA +G D + H S ++ + H G I ETP VA
Sbjct: 125 ILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPADVA 184
Query: 125 ILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGGVTS 180
+ ++E +DMI +MT G + + IP + + + AL+G S+ +GG+
Sbjct: 185 EVAKKMEELGVDMIGLMT---GMSYEGVGAGDIPDVIKQRLLALVGAVSVPTLAEGGINL 241
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
N K+ G ++LVVG++ N
Sbjct: 242 ENAKAFKDTGVNILVVGTAIDN 263
>gi|261406058|ref|YP_003242299.1| phosphoribosylanthranilate isomerase [Paenibacillus sp. Y412MC10]
gi|261282521|gb|ACX64492.1| Phosphoribosylanthranilate isomerase [Paenibacillus sp. Y412MC10]
Length = 224
Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE----ID 134
++ + D++ H + SP R ++ + V+I + P A +D ID
Sbjct: 76 ELLQETALDVVQLHGQESPQFCREVKERFPVSVFKAVSIGSDRPEAERLSALDSYAGCID 135
Query: 135 MILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+LI T +P +G G+ IP +Q ++ I L V GG+ N+ L+
Sbjct: 136 GLLIDTYDPVYGGGSGKTFAWDRIPAYQQWAE---RQGIPLFVAGGLDPDNVAHLI 188
>gi|288932475|ref|YP_003436535.1| formaldehyde-activating enzyme [Ferroglobus placidus DSM 10642]
gi|288894723|gb|ADC66260.1| formaldehyde-activating enzyme [Ferroglobus placidus DSM 10642]
Length = 394
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
ES P AK + K ++ + V GG+ N++ ++ GAD++VVG + K A+
Sbjct: 316 ESEKPPWMLAKEIKKKYNVLVAVAGGIRPENVEEVISYGADIIVVGRAITKAKDVEGAAR 375
Query: 212 R-LNDLK 217
R LN +K
Sbjct: 376 RFLNYMK 382
>gi|281501027|pdb|3L0G|A Chain A, Crystal Structure Of Nicotinate-Nucleotide
Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
Resolution
gi|281501028|pdb|3L0G|B Chain B, Crystal Structure Of Nicotinate-Nucleotide
Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
Resolution
gi|281501029|pdb|3L0G|C Chain C, Crystal Structure Of Nicotinate-Nucleotide
Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
Resolution
gi|281501030|pdb|3L0G|D Chain D, Crystal Structure Of Nicotinate-Nucleotide
Pyrophosphorylase From Ehrlichia Chaffeensis At 2.05a
Resolution
Length = 300
Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 34/149 (22%)
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
SY D++ D L+ D+HI A C IT + +R++L+ + +AI
Sbjct: 171 ESYRDNLCDGVLIK---DNHI-----ASCGSITLAIQ---RLRKNLKNEY-------IAI 212
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+ + E + + +DMIL+ + +I +I++A ++ +S+ LEV G
Sbjct: 213 ECDNISQVEESLSNNVDMILLDNM------------SISEIKKAVDIVNGKSV-LEVSGC 259
Query: 178 VTSRNIKSLVQAGADLLVVG---SSFFNQ 203
V RN++++ G D + +G +SF N+
Sbjct: 260 VNIRNVRNIALTGVDYISIGCITNSFQNK 288
>gi|319891539|ref|YP_004148414.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
pseudintermedius HKU10-03]
gi|317161235|gb|ADV04778.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
pseudintermedius HKU10-03]
Length = 212
Score = 36.6 bits (83), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 85 GCDIIT-FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI--LIMTV 141
G D++T I+ ++ H GK+ V + V LE EID + + V
Sbjct: 79 GADVVTILGVAEDASIKNAVEEAHKHGKELLVDL---IAVQDLEKRAKEIDALGADYIAV 135
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ G+ Q +S + +R+ K++I I+ V GG+ +K + G DL++VG
Sbjct: 136 HIGYDLQAEGQSPLESLRKVKSVIKNAKIA--VAGGIKPETVKEVADEGPDLIIVGGGIA 193
Query: 202 NQKGEISYAKRLND 215
N AK++ +
Sbjct: 194 NADDPREAAKQIRE 207
>gi|88658330|ref|YP_506859.1| nicotinate-nucleotide pyrophosphorylase [Ehrlichia chaffeensis str.
Arkansas]
gi|88599787|gb|ABD45256.1| nicotinate-nucleotide pyrophosphorylase [Ehrlichia chaffeensis str.
Arkansas]
Length = 279
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 34/149 (22%)
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
SY D++ D L+ D+HI A C IT + +R++L+ + +AI
Sbjct: 150 ESYRDNLCDGVLIK---DNHI-----ASCGSITLAIQ---RLRKNLKNEY-------IAI 191
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+ + E + + +DMIL+ + +I +I++A ++ +S+ LEV G
Sbjct: 192 ECDNISQVEESLSNNVDMILLDNM------------SISEIKKAVDIVNGKSV-LEVSGC 238
Query: 178 VTSRNIKSLVQAGADLLVVG---SSFFNQ 203
V RN++++ G D + +G +SF N+
Sbjct: 239 VNIRNVRNIALTGVDYISIGCITNSFQNK 267
>gi|37527501|ref|NP_930845.1| quinolinate phosphoribosyltransferase [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36786936|emb|CAE16010.1| nicotinate-nucleotide pyrophosphorylase [carboxylating]
(quinolinate phosphoribosyltransferase
[decarboxylating]) (QAPRTase) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 296
Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+P+ PV + + +DE LI+ + L TIP +++A A+ + ++LEV G
Sbjct: 206 HPDVPVEVEVETLDE----LILALKANVDIIMLDNFTIPMMKEAVAITSGK-VALEVSGN 260
Query: 178 VTSRNIKSLVQAGADLLVVGS 198
+T ++S + G D + VG+
Sbjct: 261 ITLDTLRSYAETGIDFISVGA 281
>gi|323465294|gb|ADX77447.1| 3-hexulose-6-phosphate synthase [Staphylococcus pseudintermedius
ED99]
Length = 212
Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 85 GCDIIT-FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI--LIMTV 141
G D++T I+ ++ H GK+ V + V LE EID + + V
Sbjct: 79 GADVVTILGVAEDASIKNAVEEAHKHGKELLVDL---IAVQDLEKRAKEIDALGADYIAV 135
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ G+ Q +S + +R+ K++I I+ V GG+ +K + G DL++VG
Sbjct: 136 HIGYDLQAEGQSPLESLRKVKSVIKNAKIA--VAGGIKPETVKEVADEGPDLIIVGGGIA 193
Query: 202 NQKGEISYAKRLND 215
N AK++ +
Sbjct: 194 NADDPREAAKQIRE 207
>gi|73662935|ref|YP_301716.1| hexulose-6-phosphate synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119370763|sp|Q49WT0|HPS2_STAS1 RecName: Full=3-hexulose-6-phosphate synthase 2; Short=HPS 2;
AltName: Full=D-arabino-3-hexulose-6-phosphate
formaldehyde lyase 2
gi|72495450|dbj|BAE18771.1| putative hexulose-6-phosphate synthase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 213
Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R+ K++I ++ V GG+ IK +V DL++VG
Sbjct: 131 IAVHTGYDLQAEGQSPLESLRKVKSVISNSKVA--VAGGIKPDTIKDIVAENPDLIIVGG 188
Query: 199 SFFNQKGEISYAKRLNDL 216
N + AK+ D+
Sbjct: 189 GIANADDPVEAAKQCRDI 206
>gi|157362978|ref|YP_001469745.1| N-acylglucosamine-6-phosphate 2-epimerase [Thermotoga lettingae
TMO]
gi|157313582|gb|ABV32681.1| N-acylglucosamine-6-phosphate 2-epimerase [Thermotoga lettingae
TMO]
Length = 222
Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIEST-------IPKIRQAKALIGKRSISLEVD 175
V I+ D+ DE D L+ + P F L T +P I + L K SI + +
Sbjct: 118 VGIIADIADEADAELVSALRPDFIATTLCGYTPYTLGCSLPNIELVRGLSRKMSIPIIAE 177
Query: 176 GGVTS-RNIKSLVQAGADLLVVGSS 199
GG T+ +++ Q GA +V+G++
Sbjct: 178 GGYTTLEEVQNAFQNGAYAVVIGTA 202
>gi|327482278|gb|AEA85588.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas stutzeri DSM
4166]
Length = 282
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEV 174
I P PV I + +DE++ L G G L E T+ +R A A+ R+ LE
Sbjct: 190 IAPGKPVEIEVESLDELEQAL------GAGADIVMLDELTLDDMRTAVAITAGRA-KLEA 242
Query: 175 DGGVTSRNIKSLVQAGADLLVVGS 198
GG++ ++S+ Q G D + +G+
Sbjct: 243 SGGISDDTLRSVAQTGVDYISIGA 266
>gi|238754452|ref|ZP_04615807.1| Nicotinate-nucleotide pyrophosphorylase [carboxylating] [Yersinia
ruckeri ATCC 29473]
gi|238707281|gb|EEP99643.1| Nicotinate-nucleotide pyrophosphorylase [carboxylating] [Yersinia
ruckeri ATCC 29473]
Length = 298
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
I+P+ PV + + +DE++ L + G L TIP + A L R+ LEV G
Sbjct: 205 IHPDVPVEVEVESLDELEQAL----DAGADIIMLDNFTIPMMHDAVKLTNHRA-QLEVSG 259
Query: 177 GVTSRNIKSLVQAGADLLVVGS 198
VT I+ + G D + VG+
Sbjct: 260 NVTLETIRRYAETGIDFISVGA 281
>gi|146283950|ref|YP_001174103.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas stutzeri
A1501]
gi|145572155|gb|ABP81261.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas stutzeri
A1501]
Length = 282
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEV 174
I P PV I + +DE++ L G G L E T+ +R A A+ R+ LE
Sbjct: 190 IAPGKPVEIEVESLDELEQAL------GAGADIVMLDELTLDDMRTAVAITAGRA-KLEA 242
Query: 175 DGGVTSRNIKSLVQAGADLLVVGS 198
GG++ ++S+ Q G D + +G+
Sbjct: 243 SGGISDDTLRSVAQTGVDYISIGA 266
>gi|14520674|ref|NP_126149.1| tryptophan synthase subunit alpha [Pyrococcus abyssi GE5]
gi|14423983|sp|Q9V1G9|TRPA_PYRAB RecName: Full=Tryptophan synthase alpha chain
gi|5457890|emb|CAB49380.1| trpA tryptophan synthase, subunit alpha (EC 4.2.1.20) [Pyrococcus
abyssi GE5]
Length = 248
Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 19/182 (10%)
Query: 32 KQIHFDVMDGCFVPNISFGADVIRSLRSYSD-----SVFDCHLMISSIDSHINIIADAGC 86
+Q HF + G F +F +++R R +SD + + + I D+G
Sbjct: 52 QQSHFRALKGGFKLEHAF--NIVREFRKHSDVPIVLMTYYNPVFRVGLREFIGKAKDSGV 109
Query: 87 DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID-----MILIMTV 141
D + H L G KT P TP ++ + EID + ++++
Sbjct: 110 DGMLIVDLPVMHASEFLEVAREEGIKTVFLAAPNTP----DERLKEIDKASTGFVYLISL 165
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSF 200
G + I T + + I K ++ V GV+ R +++ L+ AGA+ +VVGS+
Sbjct: 166 YGTTGARDKIPETAFNLLKRAKRICKNKVA--VGFGVSKREHVEMLLNAGANGVVVGSAL 223
Query: 201 FN 202
N
Sbjct: 224 IN 225
>gi|81427975|ref|YP_394974.1| hypothetical protein LSA0361 [Lactobacillus sakei subsp. sakei 23K]
gi|78609616|emb|CAI54662.1| Hypothetical protein LCA_0361 [Lactobacillus sakei subsp. sakei
23K]
Length = 268
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAK----ALIGKRSISLEVDG-GVTSRNIKSLVQAG 190
IL + G GQ+++ +P ++Q +I +I+ DG G+T ++ K+L+QAG
Sbjct: 3 ILFIGDTVGTMGQKMVNEYLPLLKQQYKPQVTIINGENIA---DGKGMTQKDYKNLLQAG 59
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AD + +G+ +N++ + + ++D KK
Sbjct: 60 ADAITMGNHTWNKRDILDF---IDDAKK 84
>gi|68171950|ref|ZP_00545262.1| Quinolinate phosphoribosyl transferase [Ehrlichia chaffeensis str.
Sapulpa]
gi|67998629|gb|EAM85370.1| Quinolinate phosphoribosyl transferase [Ehrlichia chaffeensis str.
Sapulpa]
Length = 124
Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H S I +++ + K +AI + + E + + +DMIL+ +
Sbjct: 11 HIASCGSITLAIQRLRKNLKNEYIAIECDNISQVEESLSNNVDMILLDNM---------- 60
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG---SSFFNQ 203
+I +I++A ++ +S+ LEV G V RN++++ G D + +G +SF N+
Sbjct: 61 --SISEIKKAVDIVNGKSV-LEVSGCVNIRNVRNIALTGVDYISIGCITNSFQNK 112
>gi|328954257|ref|YP_004371591.1| Glutamate-1-semialdehyde 2,1-aminomutase [Desulfobacca acetoxidans
DSM 11109]
gi|328454581|gb|AEB10410.1| Glutamate-1-semialdehyde 2,1-aminomutase [Desulfobacca acetoxidans
DSM 11109]
Length = 427
Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVA-ILEDVIDEIDMILIMTVNPGFGGQQLIES 153
+ P + +++ A G G E +A +L D + ++M+ + VN G E+
Sbjct: 68 AHPKVLEAVQKAAAAGTSYGAPTPAEVELADLLIDAVSGLEMVRL--VNSG------TEA 119
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
T+ +R A+A G++ I ++ DGG LVQAG+ +L G
Sbjct: 120 TMSALRLARAATGRKKI-IKFDGGYHGHADTLLVQAGSGVLTQG 162
>gi|312137569|ref|YP_004004905.1| lysyl-tRNA ligase lyss [Rhodococcus equi 103S]
gi|311886908|emb|CBH46216.1| lysyl-tRNA ligase LysS [Rhodococcus equi 103S]
Length = 1100
Score = 35.8 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 103 LRTIH-AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
++T+H A+ +K GV ++PETP+ +L+ + DE D+ + + G Q++ E +
Sbjct: 923 VKTMHGAVAEKLGVDVSPETPLEVLQKLCDENDIEYQKSWDAGAVAQEMYEHLV 976
>gi|325677462|ref|ZP_08157126.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
gi|325551709|gb|EGD21407.1| lysine--tRNA ligase [Rhodococcus equi ATCC 33707]
Length = 1121
Score = 35.8 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 103 LRTIH-AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
++T+H A+ +K GV ++PETP+ +L+ + DE D+ + + G Q++ E +
Sbjct: 944 VKTMHGAVAEKLGVDVSPETPLEVLQKLCDENDIEYQKSWDAGAVAQEMYEHLV 997
>gi|89098718|ref|ZP_01171600.1| orotidine 5'-phosphate decarboxylase [Bacillus sp. NRRL B-14911]
gi|89086680|gb|EAR65799.1| orotidine 5'-phosphate decarboxylase [Bacillus sp. NRRL B-14911]
Length = 238
Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF--- 65
P I+A DF+ E +S + K +++ V F G D++R L++ VF
Sbjct: 4 PLIIALDFAEKEEVLSFLGKFPEEKLFVKVGMELFYQE---GPDMVRELKAAGHEVFLDL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
H + +++ S + IA GCD++ H + ++ G G A + P+ I
Sbjct: 61 KLHDIPNTVGSAMRRIAGLGCDLVNVHAAGGSEMMKAALE----GLDEGTAAGKKRPLCI 116
>gi|150015753|ref|YP_001308007.1| hypothetical protein Cbei_0867 [Clostridium beijerinckii NCIMB
8052]
gi|149902218|gb|ABR33051.1| hypothetical protein Cbei_0867 [Clostridium beijerinckii NCIMB
8052]
Length = 294
Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
++++ GG+T+ IKS ++ G++ LV G+ FN K
Sbjct: 235 TVQMQGGITTETIKSAIKLGSEFLVCGTEIFNNK 268
>gi|114799016|ref|YP_761908.1| putative transaldolase [Hyphomonas neptunium ATCC 15444]
gi|123128350|sp|Q0BX85|TAL_HYPNA RecName: Full=Probable transaldolase
gi|114739190|gb|ABI77315.1| putative transaldolase [Hyphomonas neptunium ATCC 15444]
Length = 216
Score = 35.8 bits (81), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 50 GADVIRSLRS-YSDSVFDCHLMISSIDS--HINIIADAGCDIITFHPE------SSPHIR 100
G ++I+ +R Y + +F+ ++ +SI S H+ + A AG D++T P S P
Sbjct: 140 GMELIQEIRQIYDNYMFETEILAASIRSPNHVRLCALAGADVMTAPPAVIRSLVSHPLTD 199
Query: 101 RSLRTIHAMGKKTGVAI 117
+ L T A KK G+ +
Sbjct: 200 KGLETFLADAKKAGIEV 216
>gi|188532950|ref|YP_001906747.1| quinolinate phosphoribosyltransferase [Erwinia tasmaniensis Et1/99]
gi|188027992|emb|CAO95849.1| Nicotinate-nucleotide pyrophosphorylase [Erwinia tasmaniensis
Et1/99]
Length = 296
Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
++P+ PV I + ++E++ L G L T+ ++R A L R++ LEV G
Sbjct: 205 LHPDVPVEIEVESLEELEQAL----QAGADIVMLDNFTVEQMRDAVKLSDNRAL-LEVSG 259
Query: 177 GVTSRNIKSLVQAGADLLVVGS 198
VT + +++ + G D + VG+
Sbjct: 260 NVTDQTLRTFAETGVDYISVGA 281
>gi|289551626|ref|YP_003472530.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
lugdunensis HKU09-01]
gi|289181157|gb|ADC88402.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
lugdunensis HKU09-01]
Length = 210
Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R+ K++I ++ V GG+ IK +V DL++VG
Sbjct: 131 IAVHTGYDLQAEGQSPLDSLRKVKSVIKNSKVA--VAGGIKPDTIKEIVAENPDLVIVGG 188
Query: 199 SFFNQKGEISYAKRLND 215
N + + AK+ D
Sbjct: 189 GIANAEDPVEVAKQCRD 205
>gi|315659083|ref|ZP_07911949.1| 3-hexulose-6-phosphate synthase [Staphylococcus lugdunensis M23590]
gi|315495894|gb|EFU84223.1| 3-hexulose-6-phosphate synthase [Staphylococcus lugdunensis M23590]
Length = 213
Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R+ K++I ++ V GG+ IK +V DL++VG
Sbjct: 134 IAVHTGYDLQAEGQSPLDSLRKVKSVIKNSKVA--VAGGIKPDTIKEIVAENPDLVIVGG 191
Query: 199 SFFNQKGEISYAKRLND 215
N + + AK+ D
Sbjct: 192 GIANAEDPVEAAKQCRD 208
>gi|312793371|ref|YP_004026294.1| cys/met metabolism pyridoxal-phosphate-dependent protein
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180511|gb|ADQ40681.1| Cys/Met metabolism pyridoxal-phosphate-dependent protein
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 409
Score = 35.4 bits (80), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV-NPGFGGQQLIESTIPKIRQA 161
R+ +G KT A + + + + D+ +I I T+ NP +P IRQ
Sbjct: 114 FRSFENLGIKTRFAEDSSLE-SFEKHITDKTKVIFIETIGNPRL--------DVPNIRQI 164
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS-FFNQKG 205
L KR I+L VD VT+ + ++ GAD++V +S F N G
Sbjct: 165 AELARKRGIALIVDSTVTTPYLVKPIKLGADVVVHSTSKFINGSG 209
>gi|229550784|ref|ZP_04439509.1| possible 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
[Lactobacillus rhamnosus LMS2-1]
gi|229315849|gb|EEN81822.1| possible 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
[Lactobacillus rhamnosus LMS2-1]
Length = 195
Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 17/146 (11%)
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
++Y D V+ I + + + IA G + E +P I + R + A+
Sbjct: 43 KAYGDKVYIGVGTILNAEQASSAIA-VGAKFMLGPAEFTPDIFKIAREAKVI--TVPAAM 99
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+P V +L+ D + + T+ P F + + +GK+ L GG
Sbjct: 100 SPSEVVEMLDLGADIVKLFPASTLGPSF------------FKAIQGPLGKQK--LMAVGG 145
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ 203
V +N + ++GA L VGSS FNQ
Sbjct: 146 VNVKNARQFFESGASYLGVGSSMFNQ 171
>gi|254511929|ref|ZP_05123996.1| thiamine-phosphate pyrophosphorylase [Rhodobacteraceae bacterium
KLH11]
gi|221535640|gb|EEE38628.1| thiamine-phosphate pyrophosphorylase [Rhodobacteraceae bacterium
KLH11]
Length = 198
Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 23/152 (15%)
Query: 52 DVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
DV+R + S + H + ++ H I D GCD I E L+ I G
Sbjct: 37 DVMRRQIAISRDLCRAHDAVLVVNDHWQIAIDLGCDWIHLGQEDLDDA--DLKVIQKAGL 94
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIM-----TVNPGF----GGQQLIESTIPKIRQAK 162
K GV+ + + DE++ +L M + P + + + +P++ + K
Sbjct: 95 KLGVSTHDD----------DELERVLTMGPDYVALGPVYPTILKKMKWHQQGLPRVTEWK 144
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
A +G I L GG++ ++ AGAD++
Sbjct: 145 ARLG--DIPLVGIGGMSVERAAGVLDAGADIV 174
>gi|58616728|ref|YP_195927.1| nicotinate-nucleotide pyrophosphorylase [Ehrlichia ruminantium str.
Gardel]
gi|58416340|emb|CAI27453.1| Nicotinate-nucleotide pyrophosphorylase [Ehrlichia ruminantium str.
Gardel]
Length = 277
Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H S I +++ I K +A+ + + E +++ ++MIL+ +
Sbjct: 166 HIASCGSITLAIQRIKENLKDEYIAVECDNISQVEESLLNNVNMILLDNM---------- 215
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS---SFFNQ 203
+I +I QA +++ +SI LE G + RN++S+ G D + +G SF N+
Sbjct: 216 --SIAEIEQAVSIVNGKSI-LEASGCIDIRNVRSIAMTGVDYISIGCITHSFKNK 267
>gi|238789469|ref|ZP_04633254.1| hypothetical protein yfred0001_9110 [Yersinia frederiksenii ATCC
33641]
gi|238722419|gb|EEQ14074.1| hypothetical protein yfred0001_9110 [Yersinia frederiksenii ATCC
33641]
Length = 279
Score = 35.4 bits (80), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV-----------AINPETP--VA 124
I +IA +G D + H S ++ + H G I ETP VA
Sbjct: 125 ILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPADVA 184
Query: 125 ILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGGVTS 180
+ ++ +DMI +MT G + + IP+ + + AL+G S+ +GG+
Sbjct: 185 AVAKKMEALGVDMIGLMT---GMSYEGVTAGDIPEAIKQRLLALVGAVSVPTLAEGGINL 241
Query: 181 RNIKSLVQAGADLLVVGSSFFN 202
N K+ G ++LVVG++ N
Sbjct: 242 ENAKAFKDTGVNILVVGTAIDN 263
>gi|209885257|ref|YP_002289114.1| hypothetical protein OCAR_6135 [Oligotropha carboxidovorans OM5]
gi|209873453|gb|ACI93249.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
Length = 375
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMD---GCFVPNISFGADVI-RSLR 58
P+ + + A + R + + K K I FD++D G VPN+++ D RSL
Sbjct: 30 PAFRDLLVAFAKEEWRNANDRKRVPKGFDKSISFDLVDIEDGSAVPNLTWSRDTAQRSLP 89
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
+ D + + ++ S DS +N+I +AG SS HIR
Sbjct: 90 GFGDKLLE--VIHGSFDSVVNLIDEAGHQRFP-KSLSSEHIR 128
>gi|57238744|ref|YP_179880.1| nicotinate-nucleotide pyrophosphorylase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578665|ref|YP_196877.1| nicotinate-nucleotide pyrophosphorylase [Ehrlichia ruminantium str.
Welgevonden]
gi|57160823|emb|CAH57721.1| nicotinate-nucleotide pyrophosphorylase [carboxylating] [Ehrlichia
ruminantium str. Welgevonden]
gi|58417291|emb|CAI26495.1| Nicotinate-nucleotide pyrophosphorylase [Ehrlichia ruminantium str.
Welgevonden]
Length = 277
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H S I +++ I K +A+ + + E +++ ++MIL+ +
Sbjct: 166 HIASCGSITLAIQRIKENLKDEYIAVECDNISQVEESLLNNVNMILLDNM---------- 215
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS---SFFNQ 203
+I +I QA +++ +SI LE G + RN++S+ G D + +G SF N+
Sbjct: 216 --SITEIEQAVSIVNGKSI-LEASGCIDIRNVRSIAMTGVDYISIGCITHSFKNK 267
>gi|329941494|ref|ZP_08290759.1| GntR family transcriptional regulator [Streptomyces
griseoaurantiacus M045]
gi|329299211|gb|EGG43111.1| GntR family transcriptional regulator [Streptomyces
griseoaurantiacus M045]
Length = 443
Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFG------GQQLIESTIPKIRQAKALIGKRSISL 172
P+ PV + +D I+ +L+ + PG G + +P + G R++ +
Sbjct: 151 PDGPVMVASGSLDAIERVLVARLRPGDAVAVEDPGWGALLDLVPAL-------GLRTVPV 203
Query: 173 EVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
VD G ++++ + AGA LVV + N G A R +DL+
Sbjct: 204 RVDDEGPLPADVRAALSAGARALVVTARAQNPTGAAVGAARADDLR 249
>gi|284162161|ref|YP_003400784.1| formaldehyde-activating enzyme [Archaeoglobus profundus DSM 5631]
gi|284012158|gb|ADB58111.1| formaldehyde-activating enzyme [Archaeoglobus profundus DSM 5631]
Length = 393
Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
E P AK + K ++ + V GG+ N++ ++ AGAD+LVVG + + +
Sbjct: 314 EEAKPPWHLAKPVKEKFNVLVAVAGGIRVENVQEVISAGADILVVGRAITRARDVEGAVR 373
Query: 212 R-LNDLKK 218
R L+ LKK
Sbjct: 374 RFLSALKK 381
>gi|254519651|ref|ZP_05131707.1| 2-keto-3-deoxygluconate-6-phosphate aldolase [Clostridium sp.
7_2_43FAA]
gi|226913400|gb|EEH98601.1| 2-keto-3-deoxygluconate-6-phosphate aldolase [Clostridium sp.
7_2_43FAA]
Length = 203
Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
I+ KA +G +I + GGV++ N K ++ GAD L +GSS FN+
Sbjct: 137 IKDIKAPLG--NIKVMAVGGVSADNAKEFLENGADYLGIGSSLFNK 180
>gi|261368951|ref|ZP_05981834.1| molybdenum cofactor biosynthesis protein A [Subdoligranulum
variabile DSM 15176]
gi|282568904|gb|EFB74439.1| molybdenum cofactor biosynthesis protein A [Subdoligranulum
variabile DSM 15176]
Length = 320
Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG--FGGQQLIESTIPK 157
R +LR + M + GV + P + E++++ L + ++ GG+ L+ +P
Sbjct: 19 RCNLRCRYCMPAE-GVPLRPHGEILRYEEIVEIAKAALALGIDTFKLTGGEPLVRREVPA 77
Query: 158 IRQA-KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR---- 212
+ A KAL G R ++L +G + + +L+ AG D + V + + + +R
Sbjct: 78 LVAALKALPGTRQVTLTTNGLLLGAQLDALLAAGLDAVNVSLDTLDDEEYHALTRRDFPV 137
Query: 213 ---LNDLKKSA 220
L++L+++A
Sbjct: 138 ATVLDNLRRAA 148
>gi|222148638|ref|YP_002549595.1| nicotinate-nucleotide pyrophosphorylase [Agrobacterium vitis S4]
gi|221735624|gb|ACM36587.1| nicotinate-nucleotide pyrophosphorylase [Agrobacterium vitis S4]
Length = 285
Score = 35.0 bits (79), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 150 LIESTIP-KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
L+++ P ++R+A ++ RSI+ E GG+T + +++ Q+G DLL VG
Sbjct: 219 LLDNMTPEQLREAVEIVAGRSIT-EASGGITPQTARAVAQSGVDLLSVG 266
>gi|322435501|ref|YP_004217713.1| thiamine monophosphate synthase [Acidobacterium sp. MP5ACTX9]
gi|321163228|gb|ADW68933.1| thiamine monophosphate synthase [Acidobacterium sp. MP5ACTX9]
Length = 234
Score = 35.0 bits (79), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ +R+A+AL GK +++ GG+T N +S+V AGAD++ V + F
Sbjct: 161 LEGVRRARALTGKPLVAI---GGITLANARSVVDAGADMVAVITGLF 204
>gi|242372794|ref|ZP_04818368.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
M23864:W1]
gi|242349493|gb|EES41094.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
M23864:W1]
Length = 213
Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 85 GCDIIT-FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI--LIMTV 141
G D++T I+ ++ H GK+ V + V LE E+D + + V
Sbjct: 80 GADVVTILGVAEDASIKAAVEEAHKHGKELLVDM---IAVQDLEKRAKELDEMGADYIAV 136
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ G+ Q +S + +R K++I ++ V GG+ IK +V DL++VG
Sbjct: 137 HTGYDLQAEGQSPLDSLRTVKSVIKNSKVA--VAGGIKPDTIKDIVAEEPDLVIVGGGIA 194
Query: 202 NQKGEISYAKRLND 215
N + AK+ D
Sbjct: 195 NADDPVEAAKQCRD 208
>gi|254490176|ref|ZP_05103367.1| 3-hexulose-6-phosphate synthase [Methylophaga thiooxidans DMS010]
gi|224464662|gb|EEF80920.1| 3-hexulose-6-phosphate synthase [Methylophaga thiooxydans DMS010]
Length = 195
Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ + V GG+ I+S VQAGA ++VVG++ + AK L L +A
Sbjct: 144 NVKVSVAGGINKDTIQSTVQAGAAIVVVGAAIYGAPSPAESAKELRALVDAA 195
>gi|310816669|ref|YP_003964633.1| hypothetical protein EIO_2237 [Ketogulonicigenium vulgare Y25]
gi|308755404|gb|ADO43333.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 199
Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 144 GFGGQQLIESTIPKIRQAKAL----IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
G G++ + +P++R+A L + + S + G+T + K+ ++AGAD++ +G
Sbjct: 11 GRAGRRAVTENLPRLREAWRLDFVVVNGENASGGM--GLTGAHCKTFLEAGADVVTLGDH 68
Query: 200 FFNQKGEISY 209
F+QK + Y
Sbjct: 69 AFDQKDMLQY 78
>gi|285018056|ref|YP_003375767.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas albilineans
GPE PC73]
gi|283473274|emb|CBA15779.1| probable nicotinate-nucleotide pyrophosphorylase protein
[Xanthomonas albilineans]
Length = 292
Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 106 IHAMGK-----KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
IHA G T A P+ P+ I + +DE+ L + L++ P+ R+
Sbjct: 176 IHAAGSLSAAVATARAQWPQLPLVIEVETLDELREALSAGCE-----RILLDDFTPEQRR 230
Query: 161 AKALIG-----KRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
A I +R I LEV GGV I+++ + G D + +G+
Sbjct: 231 AAVAIASNEFHQRGIPLEVSGGVDLDTIRAIAEDGVDCISIGA 273
>gi|78223195|ref|YP_384942.1| nicotinate-nucleotide pyrophosphorylase [Geobacter metallireducens
GS-15]
gi|78194450|gb|ABB32217.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Geobacter
metallireducens GS-15]
Length = 276
Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+P + +A ALIG R++ +E GGV ++ + +AG D++ VG+
Sbjct: 217 LPTMTEAVALIGGRAL-VEASGGVNLETVRGIAEAGVDIISVGA 259
>gi|269104701|ref|ZP_06157397.1| molybdenum transport system protein modD [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268161341|gb|EEZ39838.1| molybdenum transport system protein modD [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 286
Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDG 176
PE + I D + D++ I++ P QL + +I + +A L+ +SI+L V G
Sbjct: 188 PENKITIEADSL--ADVVPIISAKPDI--IQLDKFSIEDVNRALELVNSATQSITLSVAG 243
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
GV NI+ G +L + + ++ Q +I N L+
Sbjct: 244 GVNIHNIEQFASTGVNLFITSAPYYAQPTDIKVIITANSLE 284
>gi|114766770|ref|ZP_01445707.1| Ser/Thr protein phosphatase family protein [Pelagibaca bermudensis
HTCC2601]
gi|114541027|gb|EAU44084.1| Ser/Thr protein phosphatase family protein [Roseovarius sp.
HTCC2601]
Length = 270
Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 144 GFGGQQLIESTIPKIRQAKAL----IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
G G+ I +PK+R+A L + + S + G+T+ + K +++AGAD++ +G
Sbjct: 11 GRAGRAAIAERLPKLREAWKLDFVVVNGENASNGM--GLTAEHAKGILEAGADVVTLGDH 68
Query: 200 FFNQKGEISY 209
F+QK +++
Sbjct: 69 AFDQKDMLTF 78
>gi|330446859|ref|ZP_08310510.1| nicotinate-nucleotide diphosphorylase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491050|dbj|GAA05007.1| nicotinate-nucleotide diphosphorylase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 295
Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
T +NP PV + + +DE L + G L T+ +R+A A K ++L
Sbjct: 200 TAKQLNPNKPVEVETESLDE----LKQAIEAGADIVMLDNFTLEMMREAVAF-NKGRVAL 254
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGS 198
E G +T NI+ + G D + VG+
Sbjct: 255 ENSGDITLSNIRECAETGVDYISVGA 280
>gi|156063140|ref|XP_001597492.1| hypothetical protein SS1G_01686 [Sclerotinia sclerotiorum 1980]
gi|154697022|gb|EDN96760.1| hypothetical protein SS1G_01686 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 297
Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
+H + +++ A ET +I ++VID + + ++ V PG G +L++ T K+ QA
Sbjct: 53 VHPLMRQSSHAKMTETAGSIAQNVIDMLPRLHVIVVGPGLGRDKLMQDTCVKVLQA 108
>gi|290473980|ref|YP_003466854.1| N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-
imidazolecarboxamide isomerase [Xenorhabdus bovienii
SS-2004]
gi|289173287|emb|CBJ80062.1| N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-
imidazolecarboxamide isomerase [Xenorhabdus bovienii
SS-2004]
Length = 245
Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 156 PKIRQA---KALIGKRSISLEVDGGVTSRN-IKSLVQAGADLLVVGSSFFNQ 203
P RQ + L+ S+ ++V GG+ S N IKSL++AGA +V+GS+ Q
Sbjct: 57 PTKRQMILLRELLAGVSVPVQVGGGIRSENDIKSLLEAGASRVVIGSTAITQ 108
>gi|197118702|ref|YP_002139129.1| quinolinate phosphoribosyltransferase (decarboxylating) [Geobacter
bemidjiensis Bem]
gi|197088062|gb|ACH39333.1| quinolinate phosphoribosyltransferase (decarboxylating) [Geobacter
bemidjiensis Bem]
Length = 276
Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ ++ +A +IGKR++ +E GGV + IKS+ Q G D++ VG+
Sbjct: 217 LEEMTKAVQMIGKRAL-VEASGGVNLQTIKSIAQTGVDIISVGA 259
Searching..................................................done
Results from round 2
>gi|254780975|ref|YP_003065388.1| D-ribulose-5 phosphate 3-epimerase protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040652|gb|ACT57448.1| D-ribulose-5 phosphate 3-epimerase protein [Candidatus Liberibacter
asiaticus str. psy62]
Length = 224
Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats.
Identities = 224/224 (100%), Positives = 224/224 (100%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY
Sbjct: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE
Sbjct: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS
Sbjct: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID
Sbjct: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
>gi|118593302|ref|ZP_01550687.1| probable d-ribulose-5-phosphate 3-epimerase protein [Stappia
aggregata IAM 12614]
gi|118434193|gb|EAV40849.1| probable d-ribulose-5-phosphate 3-epimerase protein [Stappia
aggregata IAM 12614]
Length = 223
Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats.
Identities = 114/220 (51%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSILA+DFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI LR +
Sbjct: 1 MPRDIKIAPSILASDFSKLGQEVRDVVEAGADWIHLDVMDGHFVPNITFGPDVIAKLRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFD HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I +GKK GV++NP
Sbjct: 61 TDKVFDTHLMIAPCDPYLEAFAKAGSDIITVHAEAGPHLDRSLQAIRNLGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++LE V+D +D+IL+MTVNPGFGGQ+ I+S + K R+ + +IG R I LE+DGGVT
Sbjct: 121 TPESVLEYVLDRLDLILVMTVNPGFGGQKFIQSQVEKTRRIRQMIGDRPIDLEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F SYA ++ ++K+A
Sbjct: 181 ETAPLVAAAGANVLVAGSAVFKGGTVESYAGNISAIRKAA 220
>gi|163758157|ref|ZP_02165245.1| putative pentose-5-phosphate-3-epimerase protein [Hoeflea
phototrophica DFL-43]
gi|162284446|gb|EDQ34729.1| putative pentose-5-phosphate-3-epimerase protein [Hoeflea
phototrophica DFL-43]
Length = 249
Score = 304 bits (778), Expect = 7e-81, Method: Composition-based stats.
Identities = 111/218 (50%), Positives = 155/218 (71%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I I PSIL+ADFSRLG++I + +AGA IH DVMDG FVPNI+FG +I+++R +
Sbjct: 31 SKPILIAPSILSADFSRLGDDIEGVMRAGADWIHLDVMDGHFVPNITFGPGIIKAVRPRT 90
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+VFDCHLMI D ++ ADAGCDIIT H E++ H+ RSL+ I A+GKK GV++NP T
Sbjct: 91 TAVFDCHLMIEPCDPYLEAFADAGCDIITVHAEATKHLDRSLQAIRALGKKAGVSLNPST 150
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P +++E V+D +D+IL+MTVNPGFGGQ I S + K+ + K +IG R I +E+DGGVT
Sbjct: 151 PESVIEYVLDRLDLILLMTVNPGFGGQAFIPSVVDKVARVKKMIGDRPIHIEIDGGVTPA 210
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+LV GS+ F GE +AK + ++++
Sbjct: 211 TAPLVTDAGADVLVAGSAVFKGNGETDWAKNITAIREA 248
>gi|226313310|ref|YP_002773204.1| ribulose-5-phosphate 3-epimerase [Brevibacillus brevis NBRC 100599]
gi|226096258|dbj|BAH44700.1| ribulose-5-phosphate 3-epimerase [Brevibacillus brevis NBRC 100599]
Length = 216
Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSADFARLGEEILDVEKGGADWIHVDVMDGHFVPNITIGPLIVEAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A +G D IT H E+ H+ R+L I G K GV +NP TP++
Sbjct: 62 LDVHLMIEEPDRYIPQFAKSGADWITVHQEACRHLHRTLYLIKEQGVKAGVVLNPATPIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---SLEVDGGVTSR 181
+E V+ ++DM+L+MTVNPGFGGQ+ I S +PK+ Q + ++ +R + +E+DGGV ++
Sbjct: 122 TIEPVLADLDMVLLMTVNPGFGGQKFIHSVVPKVAQLRQMLNERGLGHVEIEIDGGVNAQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGA +LV GS+ FNQ+ +
Sbjct: 182 TARLCEEAGATVLVAGSAVFNQENRGQAIAAIR 214
>gi|325293239|ref|YP_004279103.1| ribulose-phosphate 3-epimerase [Agrobacterium sp. H13-3]
gi|325061092|gb|ADY64783.1| ribulose-phosphate 3-epimerase [Agrobacterium sp. H13-3]
Length = 225
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 117/223 (52%), Positives = 168/223 (75%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I+I PSILA++F++LG+E++++T+AGA IH DVMDG FVPNISFG DVI++LR +
Sbjct: 1 MSLPIRIAPSILASNFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S++ FDCHLMI+ +D ++ A AGCD IT H E+ PH+ RSL+TI +G+K GV +NP
Sbjct: 61 SNAFFDCHLMIAPVDPYLEAFAKAGCDGITVHAEAGPHLHRSLQTIRTLGRKAGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++++E+V+D++D++LIM+VNPGFGGQ+ I + + KIR AKA+IG R I LEVDGGVT+
Sbjct: 121 TPLSVIENVLDDVDLVLIMSVNPGFGGQKFIPAMLDKIRAAKAMIGDRPIELEVDGGVTA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++V AGA+ LV GS+ F G Y K ++ L+ + A
Sbjct: 181 ETAGAIVAAGANALVAGSAVFKGDGVADYRKTVSLLRSVSEAA 223
>gi|86357885|ref|YP_469777.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli CFN 42]
gi|86281987|gb|ABC91050.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli CFN 42]
Length = 225
Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats.
Identities = 123/220 (55%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ ++T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRDVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS +D+++ A AGCD IT H ES PH+ RSL+TI +GKK GV +NP
Sbjct: 61 TSATFDCHLMISPVDNYLEAFAKAGCDRITVHAESGPHLHRSLQTIRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMTSKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F +Y + + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGGTVENYRRTVADLRRAA 220
>gi|228987003|ref|ZP_04147129.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157436|ref|ZP_04285514.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 4342]
gi|228626163|gb|EEK82912.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 4342]
gi|228772781|gb|EEM21221.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 214
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIQNPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV
Sbjct: 122 MIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|114705296|ref|ZP_01438204.1| putative pentose-5-phosphate-3-epimerase protein [Fulvimarina
pelagi HTCC2506]
gi|114540081|gb|EAU43201.1| putative pentose-5-phosphate-3-epimerase protein [Fulvimarina
pelagi HTCC2506]
Length = 220
Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats.
Identities = 108/218 (49%), Positives = 152/218 (69%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLGEEI + +AGA IH DVMDG +VPNI+FG +I+++R S
Sbjct: 1 MSEVLIAPSILSADFARLGEEIRAVDEAGADWIHLDVMDGHYVPNITFGPPIIKAVRGAS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLMI D ++ A+AGCD+IT H E++ H+ RSL I +G K GV++NP T
Sbjct: 61 KKVFDCHLMIEPCDPYLQAFAEAGCDVITVHAEATTHLARSLAAIRDLGVKAGVSLNPST 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P +++E VID++D+IL+MTVNPGFGGQ+ I + K+R+ K +IG R I +E+DGGVT+
Sbjct: 121 PESVIEYVIDQVDLILLMTVNPGFGGQKFIHPVVEKVRRVKRMIGDRDIRIEIDGGVTTE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+V AGAD+LV GS+ F SYA + ++++
Sbjct: 181 TAPLVVAAGADVLVAGSAVFKGGTPKSYAANMKAIREA 218
>gi|47569486|ref|ZP_00240166.1| ribulose-phosphate 3-epimerase [Bacillus cereus G9241]
gi|47553815|gb|EAL12186.1| ribulose-phosphate 3-epimerase [Bacillus cereus G9241]
Length = 214
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV
Sbjct: 122 MIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|229174526|ref|ZP_04302058.1| Ribulose-phosphate 3-epimerase [Bacillus cereus MM3]
gi|228609086|gb|EEK66376.1| Ribulose-phosphate 3-epimerase [Bacillus cereus MM3]
Length = 214
Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNTET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|222086125|ref|YP_002544657.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
gi|221723573|gb|ACM26729.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
Length = 228
Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 126/220 (57%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF++LG+E+ ++T+AGA IH DVMDG FVPNISFGADVI+SLRSY
Sbjct: 1 MTLPIRIAPSILAADFAKLGQEVKDVTEAGADWIHLDVMDGHFVPNISFGADVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS D ++ A AGCD IT H E+ H+ RSL+TI +GKK GV +NP
Sbjct: 61 TTATFDCHLMISPADPYLEAFAKAGCDRITVHAEAGVHLHRSLQTIRNLGKKIGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ILE+V+D+ID+ILIM+VNPGFGGQ+ I + KIR AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSILENVLDDIDLILIMSVNPGFGGQKFIPAMADKIRNAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F +Y + ++DL+ +A
Sbjct: 181 ETAPLITAAGANVLVAGSAIFKGGSVEAYKQTVSDLRAAA 220
>gi|163941598|ref|YP_001646482.1| ribulose-phosphate 3-epimerase [Bacillus weihenstephanensis KBAB4]
gi|229061463|ref|ZP_04198808.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH603]
gi|229134668|ref|ZP_04263477.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST196]
gi|229168600|ref|ZP_04296323.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH621]
gi|163863795|gb|ABY44854.1| Ribulose-phosphate 3-epimerase [Bacillus weihenstephanensis KBAB4]
gi|228615006|gb|EEK72108.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH621]
gi|228648714|gb|EEL04740.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST196]
gi|228717886|gb|EEL69534.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH603]
Length = 214
Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFSRLGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSRLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHDIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCIEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|229162796|ref|ZP_04290753.1| Ribulose-phosphate 3-epimerase [Bacillus cereus R309803]
gi|228620678|gb|EEK77547.1| Ribulose-phosphate 3-epimerase [Bacillus cereus R309803]
Length = 214
Score = 300 bits (770), Expect = 8e-80, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|30263863|ref|NP_846240.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Ames]
gi|42782952|ref|NP_980199.1| ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 10987]
gi|47529289|ref|YP_020638.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186710|ref|YP_029962.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Sterne]
gi|49478420|ref|YP_037921.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118479082|ref|YP_896233.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis str. Al
Hakam]
gi|165872286|ref|ZP_02216923.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0488]
gi|167641108|ref|ZP_02399363.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0193]
gi|170688814|ref|ZP_02880017.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0465]
gi|170708794|ref|ZP_02899230.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0389]
gi|177654929|ref|ZP_02936646.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0174]
gi|190565885|ref|ZP_03018804.1| ribulose-phosphate 3-epimerase [Bacillus anthracis Tsiankovskii-I]
gi|196038712|ref|ZP_03106020.1| ribulose-phosphate 3-epimerase [Bacillus cereus NVH0597-99]
gi|196047432|ref|ZP_03114644.1| ribulose-phosphate 3-epimerase [Bacillus cereus 03BB108]
gi|206976755|ref|ZP_03237659.1| ribulose-phosphate 3-epimerase [Bacillus cereus H3081.97]
gi|217961280|ref|YP_002339848.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH187]
gi|218904990|ref|YP_002452824.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH820]
gi|222097305|ref|YP_002531362.1| ribulose-phosphate 3-epimerase [Bacillus cereus Q1]
gi|225865841|ref|YP_002751219.1| ribulose-phosphate 3-epimerase [Bacillus cereus 03BB102]
gi|227813232|ref|YP_002813241.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. CDC 684]
gi|228916497|ref|ZP_04080063.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228928908|ref|ZP_04091940.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935174|ref|ZP_04098001.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947579|ref|ZP_04109869.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229092903|ref|ZP_04224037.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-42]
gi|229123374|ref|ZP_04252578.1| Ribulose-phosphate 3-epimerase [Bacillus cereus 95/8201]
gi|229140506|ref|ZP_04269061.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST26]
gi|229186100|ref|ZP_04313269.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BGSC 6E1]
gi|229197971|ref|ZP_04324685.1| Ribulose-phosphate 3-epimerase [Bacillus cereus m1293]
gi|229601030|ref|YP_002868097.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0248]
gi|254683431|ref|ZP_05147291.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. CNEVA-9066]
gi|254721392|ref|ZP_05183181.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A1055]
gi|254735899|ref|ZP_05193605.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Western
North America USA6153]
gi|254751043|ref|ZP_05203082.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Vollum]
gi|254756708|ref|ZP_05208737.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Australia
94]
gi|301055351|ref|YP_003793562.1| ribulose-phosphate 3-epimerase [Bacillus anthracis CI]
gi|30258507|gb|AAP27726.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Ames]
gi|42738879|gb|AAS42807.1| ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 10987]
gi|47504437|gb|AAT33113.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180637|gb|AAT56013.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Sterne]
gi|49329976|gb|AAT60622.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|118418307|gb|ABK86726.1| ribulose-5-phosphate 3-epimerase [Bacillus thuringiensis str. Al
Hakam]
gi|164711962|gb|EDR17502.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0488]
gi|167510888|gb|EDR86279.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0193]
gi|170126279|gb|EDS95170.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0389]
gi|170667169|gb|EDT17929.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0465]
gi|172080440|gb|EDT65527.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0174]
gi|190562804|gb|EDV16770.1| ribulose-phosphate 3-epimerase [Bacillus anthracis Tsiankovskii-I]
gi|196021740|gb|EDX60435.1| ribulose-phosphate 3-epimerase [Bacillus cereus 03BB108]
gi|196030435|gb|EDX69034.1| ribulose-phosphate 3-epimerase [Bacillus cereus NVH0597-99]
gi|206745065|gb|EDZ56468.1| ribulose-phosphate 3-epimerase [Bacillus cereus H3081.97]
gi|217063561|gb|ACJ77811.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH187]
gi|218537513|gb|ACK89911.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH820]
gi|221241363|gb|ACM14073.1| ribulose-phosphate 3-epimerase [Bacillus cereus Q1]
gi|225789555|gb|ACO29772.1| ribulose-phosphate 3-epimerase [Bacillus cereus 03BB102]
gi|227005075|gb|ACP14818.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. CDC 684]
gi|228585450|gb|EEK43554.1| Ribulose-phosphate 3-epimerase [Bacillus cereus m1293]
gi|228597276|gb|EEK54927.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BGSC 6E1]
gi|228643067|gb|EEK99343.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST26]
gi|228660150|gb|EEL15786.1| Ribulose-phosphate 3-epimerase [Bacillus cereus 95/8201]
gi|228690525|gb|EEL44308.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-42]
gi|228812099|gb|EEM58430.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824539|gb|EEM70344.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830715|gb|EEM76320.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843076|gb|EEM88158.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229265438|gb|ACQ47075.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0248]
gi|300377520|gb|ADK06424.1| ribulose-phosphate 3-epimerase [Bacillus cereus biovar anthracis
str. CI]
gi|324327758|gb|ADY23018.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 214
Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|153009704|ref|YP_001370919.1| ribulose-phosphate 3-epimerase [Ochrobactrum anthropi ATCC 49188]
gi|151561592|gb|ABS15090.1| Ribulose-phosphate 3-epimerase [Ochrobactrum anthropi ATCC 49188]
Length = 225
Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats.
Identities = 108/223 (48%), Positives = 155/223 (69%), Gaps = 1/223 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ ADAGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLAPFADAGCDLITIHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +VID++D++L+MTVNPGFGGQ+ I + KI++ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVIDDVDLVLVMTVNPGFGGQKFITPMLDKIKRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
S+V AGA++LV GS+ + SY + ++ +A A
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANIQAIRTAAQAA 222
>gi|190891970|ref|YP_001978512.1| D-ribulose-5 phosphate 3-epimerase [Rhizobium etli CIAT 652]
gi|190697249|gb|ACE91334.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli CIAT
652]
Length = 225
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 124/220 (56%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMIS +D ++ A AGCD IT H ES PH+ RSL+T+ +GKK GV +NP
Sbjct: 61 TDATFDCHLMISPVDDYLEAFAKAGCDRITVHAESGPHLHRSLQTVRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK++IG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAGKIAAAKSMIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F +Y K + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGGTVENYRKTVADLRQAA 220
>gi|167636416|ref|ZP_02394715.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0442]
gi|254739853|ref|ZP_05197546.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. Kruger B]
gi|167528158|gb|EDR90945.1| ribulose-phosphate 3-epimerase [Bacillus anthracis str. A0442]
Length = 214
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A G DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKVGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|52141629|ref|YP_085201.1| ribulose-phosphate 3-epimerase [Bacillus cereus E33L]
gi|229098329|ref|ZP_04229276.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-29]
gi|229117346|ref|ZP_04246724.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock1-3]
gi|51975098|gb|AAU16648.1| ribulose-phosphate 3-epimerase [Bacillus cereus E33L]
gi|228666246|gb|EEL21710.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock1-3]
gi|228685227|gb|EEL39158.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-29]
Length = 214
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRIIR 213
>gi|229031490|ref|ZP_04187490.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1271]
gi|228729779|gb|EEL80759.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1271]
Length = 214
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCIEAGANVLVAGSAVYNQKDRGEAIRIIR 213
>gi|196035873|ref|ZP_03103275.1| ribulose-phosphate 3-epimerase [Bacillus cereus W]
gi|195991522|gb|EDX55488.1| ribulose-phosphate 3-epimerase [Bacillus cereus W]
Length = 214
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 149/212 (70%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV ++
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|229013044|ref|ZP_04170209.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides DSM 2048]
gi|228748298|gb|EEL98158.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides DSM 2048]
Length = 214
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFSRLGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSRLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHDIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 TIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQIAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCIEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|89098699|ref|ZP_01171581.1| ribulose-phosphate 3-epimerase [Bacillus sp. NRRL B-14911]
gi|89086661|gb|EAR65780.1| ribulose-phosphate 3-epimerase [Bacillus sp. NRRL B-14911]
Length = 214
Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFSRLGEEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSADFSRLGEEIKDVERGGADYIHVDVMDGHFVPNITIGPLIVEAVRPITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+S H+ R++ I + G K GV +NP TP
Sbjct: 62 LDVHLMIENPDQYIEAFAKAGADYITVHAEASRHLHRTIHLIKSYGVKAGVVLNPATPAE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +I +IDM+L+MTVNPGFGGQ+ I S +PKIRQ K + ++ + +EVDGGV
Sbjct: 122 ALKHIIQDIDMVLLMTVNPGFGGQKFISSVLPKIRQVKEMAAEQGLDLEIEVDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K ++AGA++LV GS+ +NQK L
Sbjct: 182 AKLCIEAGANVLVAGSAVYNQKDRAKAIAALR 213
>gi|229104422|ref|ZP_04235091.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-28]
gi|228679120|gb|EEL33328.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-28]
Length = 214
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNVET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRIIR 213
>gi|229019058|ref|ZP_04175896.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1273]
gi|229025302|ref|ZP_04181721.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1272]
gi|228735993|gb|EEL86569.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1272]
gi|228742226|gb|EEL92388.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH1273]
Length = 214
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI++ ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKEVAEMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRIIR 213
>gi|152976226|ref|YP_001375743.1| ribulose-phosphate 3-epimerase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024978|gb|ABS22748.1| Ribulose-phosphate 3-epimerase [Bacillus cytotoxicus NVH 391-98]
Length = 214
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDHYIPTFAKAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
I+E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q +I +R++ +EVDGGV +
Sbjct: 122 IIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVSEMIKERNLQVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCIEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|75763206|ref|ZP_00742969.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899013|ref|YP_002447424.1| ribulose-phosphate 3-epimerase [Bacillus cereus G9842]
gi|228902364|ref|ZP_04066520.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis IBL 4222]
gi|228966809|ref|ZP_04127853.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|74489303|gb|EAO52756.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218546011|gb|ACK98405.1| ribulose-phosphate 3-epimerase [Bacillus cereus G9842]
gi|228792908|gb|EEM40466.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228857262|gb|EEN01766.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis IBL 4222]
Length = 214
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHAEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|206971355|ref|ZP_03232306.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH1134]
gi|218230927|ref|YP_002368661.1| ribulose-phosphate 3-epimerase [Bacillus cereus B4264]
gi|228909685|ref|ZP_04073508.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis IBL 200]
gi|228922614|ref|ZP_04085914.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954137|ref|ZP_04116165.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229047547|ref|ZP_04193137.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH676]
gi|229071358|ref|ZP_04204581.1| Ribulose-phosphate 3-epimerase [Bacillus cereus F65185]
gi|229081115|ref|ZP_04213625.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock4-2]
gi|229111331|ref|ZP_04240884.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock1-15]
gi|229146431|ref|ZP_04274802.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST24]
gi|229152059|ref|ZP_04280254.1| Ribulose-phosphate 3-epimerase [Bacillus cereus m1550]
gi|229180136|ref|ZP_04307480.1| Ribulose-phosphate 3-epimerase [Bacillus cereus 172560W]
gi|296504355|ref|YP_003666055.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis BMB171]
gi|206734127|gb|EDZ51298.1| ribulose-phosphate 3-epimerase [Bacillus cereus AH1134]
gi|218158884|gb|ACK58876.1| ribulose-phosphate 3-epimerase [Bacillus cereus B4264]
gi|228603345|gb|EEK60822.1| Ribulose-phosphate 3-epimerase [Bacillus cereus 172560W]
gi|228631408|gb|EEK88042.1| Ribulose-phosphate 3-epimerase [Bacillus cereus m1550]
gi|228637064|gb|EEK93523.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-ST24]
gi|228672107|gb|EEL27398.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock1-15]
gi|228702159|gb|EEL54635.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock4-2]
gi|228711812|gb|EEL63764.1| Ribulose-phosphate 3-epimerase [Bacillus cereus F65185]
gi|228723794|gb|EEL75149.1| Ribulose-phosphate 3-epimerase [Bacillus cereus AH676]
gi|228805457|gb|EEM52048.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228837043|gb|EEM82384.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228849974|gb|EEM94805.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis IBL 200]
gi|296325407|gb|ADH08335.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis BMB171]
Length = 214
Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|228960076|ref|ZP_04121740.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228799592|gb|EEM46545.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 214
Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K V+AGA++LV GS+ +NQK + +
Sbjct: 182 AKLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|229086413|ref|ZP_04218589.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-44]
gi|228696929|gb|EEL49738.1| Ribulose-phosphate 3-epimerase [Bacillus cereus Rock3-44]
Length = 214
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEACPHLHRTIELIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R + +EVDGGV +
Sbjct: 122 MIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVNERDLQVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|300024634|ref|YP_003757245.1| ribulose-phosphate 3-epimerase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526455|gb|ADJ24924.1| ribulose-phosphate 3-epimerase [Hyphomicrobium denitrificans ATCC
51888]
Length = 223
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 111/223 (49%), Positives = 153/223 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF +L +EI + AGA IH DVMDG FVPNI+FGA +I+++R
Sbjct: 1 MTRPVLIAPSILSADFGKLADEIRAVDAAGADWIHCDVMDGHFVPNITFGAPIIKAVRGA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S +FD HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I A+GKK GV++NP
Sbjct: 61 SKKIFDVHLMIAPADPYLADFAAAGADIITVHAEAGPHLDRSLQAIRALGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++E +D ID+IL+M+VNPGFGGQ I S + KIR+ KA++G R I +EVDGGVT
Sbjct: 121 TPENVIEYCLDRIDLILLMSVNPGFGGQSFIPSALEKIRRVKAMVGARPIDIEVDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+V+AGA++LV GS+ F E SYA + ++ + ++
Sbjct: 181 ETAPEVVKAGANVLVAGSAVFKGGSEKSYATNIAAIRNATKSV 223
>gi|124023384|ref|YP_001017691.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9303]
gi|123963670|gb|ABM78426.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9303]
Length = 264
Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ I PSIL+ADFSRLGE++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 40 TKSLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 99
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG D I E+ PH+ R+L I +GKK G +NP T
Sbjct: 100 SKPLDVHLMIVEPERYVGDFAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNPST 159
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ I++ + KIR + + ++ + +EVDGG+
Sbjct: 160 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRDLRRICDEQGLDPWIEVDGGIK 219
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ YA+ + ++ S
Sbjct: 220 ADNAWKVIEAGANAIVSGSGVFNQPD---YAEAIRGIRNS 256
>gi|17228277|ref|NP_484825.1| ribulose-phosphate 3-epimerase [Nostoc sp. PCC 7120]
gi|17130127|dbj|BAB72739.1| ribulose-phosphate 3-epimerase [Nostoc sp. PCC 7120]
Length = 235
Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 144/222 (64%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 7 EKPIVISPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 67 KKPLDVHLMIVEPEKYVEDFAKAGADIISVHCEHNASPHLHRTLGQIKELGKQAGVVLNP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D+ILIM+VNPGFGGQ I +PKIRQ + + +R + +EVDGG
Sbjct: 127 GTPLELIEYVLELCDLILIMSVNPGFGGQSFIPGVVPKIRQLRQMCDERGLDPWIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + N +++AGA+ +V GS+ FN K YA+ + +++ S
Sbjct: 187 LKANNTWQVLEAGANAIVAGSAVFNAKD---YAEAITNIRNS 225
>gi|289435161|ref|YP_003465033.1| ribulose-phosphate 3-epimerase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289171405|emb|CBH27949.1| ribulose-phosphate 3-epimerase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 218
Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K +I ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKQIIDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGA++ V GS + K S +L
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQSPIDKLRA 214
>gi|228940948|ref|ZP_04103507.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973877|ref|ZP_04134453.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980467|ref|ZP_04140777.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis Bt407]
gi|228779287|gb|EEM27544.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis Bt407]
gi|228785902|gb|EEM33905.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818784|gb|EEM64850.1| Ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941629|gb|AEA17525.1| ribulose-phosphate 3-epimerase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 214
Score = 297 bits (761), Expect = 7e-79, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I AG DIIT H E+ H+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFTQAGADIITVHVEACQHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|228992588|ref|ZP_04152515.1| Ribulose-phosphate 3-epimerase [Bacillus pseudomycoides DSM 12442]
gi|228998636|ref|ZP_04158223.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides Rock3-17]
gi|229006136|ref|ZP_04163823.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides Rock1-4]
gi|228755089|gb|EEM04447.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides Rock1-4]
gi|228761104|gb|EEM10063.1| Ribulose-phosphate 3-epimerase [Bacillus mycoides Rock3-17]
gi|228767222|gb|EEM15858.1| Ribulose-phosphate 3-epimerase [Bacillus pseudomycoides DSM 12442]
Length = 214
Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAKAGADIITVHVEVCPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 MIEHVLGDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLQVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|254470021|ref|ZP_05083425.1| ribulose-phosphate 3-epimerase [Pseudovibrio sp. JE062]
gi|211960332|gb|EEA95528.1| ribulose-phosphate 3-epimerase [Pseudovibrio sp. JE062]
Length = 222
Score = 297 bits (760), Expect = 9e-79, Method: Composition-based stats.
Identities = 107/220 (48%), Positives = 150/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+LA+DFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI LR +
Sbjct: 1 MAQPLVIAPSVLASDFSKLGQEVRDVVEAGADWIHLDVMDGHFVPNITFGPDVIAKLRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFD HLMI D ++ A AG D IT H E++ H+ RSL+ I A+GKK GV++NP
Sbjct: 61 TDKVFDTHLMIEPCDPYLEAFAKAGSDYITVHAEATTHLHRSLQAIRALGKKAGVSLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + LE V+D +D+IL+MTVNPGFGGQ+ I S I K+ + K++IG R I +++DGG+T
Sbjct: 121 THESYLEYVLDSVDLILVMTVNPGFGGQKFIHSQIEKVARIKSMIGDRPIRIQIDGGITP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD LV GS+ F SY + + ++ +A
Sbjct: 181 ETAPLVTKAGADTLVAGSAVFKGGTVESYRENITAIRTAA 220
>gi|30021948|ref|NP_833579.1| ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 14579]
gi|229129136|ref|ZP_04258109.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-Cer4]
gi|29897504|gb|AAP10780.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 14579]
gi|228654373|gb|EEL10238.1| Ribulose-phosphate 3-epimerase [Bacillus cereus BDRD-Cer4]
Length = 214
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYILTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|17987399|ref|NP_540033.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str. 16M]
gi|225627340|ref|ZP_03785377.1| ribulose-phosphate 3-epimerase [Brucella ceti str. Cudo]
gi|17983088|gb|AAL52297.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str. 16M]
gi|225617345|gb|EEH14390.1| ribulose-phosphate 3-epimerase [Brucella ceti str. Cudo]
Length = 272
Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 48 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 106
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 107 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 166
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 167 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 226
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 227 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 260
>gi|81299415|ref|YP_399623.1| ribulose-phosphate 3-epimerase [Synechococcus elongatus PCC 7942]
gi|81168296|gb|ABB56636.1| ribulose-5-phosphate 3-epimerase [Synechococcus elongatus PCC 7942]
Length = 247
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 143/224 (63%), Gaps = 3/224 (1%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT S+ I PSIL+ADFSRLG+++ + +AGA IH DVMDG FVPNI+ G ++ +LR
Sbjct: 21 MTQKSVVIAPSILSADFSRLGDDVRAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRP 80
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK+ GV +NP
Sbjct: 81 VTQKPLDVHLMIVEPEKYVPDFAKAGADIISVQAEACPHLHRNLAQIKDLGKQAGVVLNP 140
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TPV LE V++ D+ILIM+VNPGFGGQ I + +PKIR+ +A+ +R + +EVDGG
Sbjct: 141 STPVETLEYVLELCDLILIMSVNPGFGGQSFIPAVLPKIRKLRAMCDERGLDPWIEVDGG 200
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ + N +++AGA+ +V GS+ FN + + K+ L
Sbjct: 201 LKANNTWQVLEAGANAIVAGSAVFNAPDYAEAIAAIRNSKRPEL 244
>gi|75910871|ref|YP_325167.1| ribulose-phosphate 3-epimerase [Anabaena variabilis ATCC 29413]
gi|75704596|gb|ABA24272.1| ribulose-5-phosphate 3-epimerase [Anabaena variabilis ATCC 29413]
Length = 235
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 144/222 (64%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 7 EKPIVISPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 67 KKPLDVHLMIVEPEKYVEDFAKAGADIISVHCEHNASPHLHRTLGQIKELGKQAGVVLNP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D+ILIM+VNPGFGGQ I +PKIR+ + + +R + +EVDGG
Sbjct: 127 GTPLELIEYVLELCDLILIMSVNPGFGGQSFIPGVVPKIRKLRQMCDERGLDPWIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + N +++AGA+ +V GS+ FN K YA+ + +++ S
Sbjct: 187 LKANNTWQVLEAGANAIVAGSAVFNAKD---YAEAITNIRNS 225
>gi|284047700|ref|YP_003398039.1| ribulose-phosphate 3-epimerase [Acidaminococcus fermentans DSM
20731]
gi|283951921|gb|ADB46724.1| ribulose-phosphate 3-epimerase [Acidaminococcus fermentans DSM
20731]
Length = 213
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 143/211 (67%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL++DFSRLGEE++ I AGA H DVMDG FVPN++FGA V++SLR ++ F
Sbjct: 3 IIAPSILSSDFSRLGEEVARIQDAGADWCHIDVMDGQFVPNLTFGAPVVKSLRKRTEMFF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +++++ A AG D+I H E++ H+ R L++IH+ G + GVA+NP TP+
Sbjct: 63 DCHLMVENPENYVDSFAAAGADLICVHAEATHHLHRLLQSIHSKGIQAGVALNPATPLCQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+E+++ DMILIM+VNPGFGGQ+ I +++ KIR+ K +I +R + +EVDGGV
Sbjct: 123 IEEILPYADMILIMSVNPGFGGQKFIPTSVDKIRRLKQMIRERDLKTLIEVDGGVNGETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ +AGAD+LV GS F L
Sbjct: 183 KACREAGADVLVAGSFVFGAADMQEAVAALR 213
>gi|229192029|ref|ZP_04318999.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 10876]
gi|228591580|gb|EEK49429.1| Ribulose-phosphate 3-epimerase [Bacillus cereus ATCC 10876]
Length = 214
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGAHYIHVDVMDGHFVPNITIGPLIVEAIRPITSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DIIT H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDNYIPTFAQAGADIITVHVEACPHLHRTIQLIKSHGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+++IDM+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV +
Sbjct: 122 VIEHVLEDIDMVLLMTVNPGFGGQKFIHSVLPKIKQVADMVKERNLEVEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQK + +
Sbjct: 182 ARLCVEAGANVLVAGSAVYNQKDRGEAIRVIR 213
>gi|313632750|gb|EFR99718.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
gi|313637327|gb|EFS02812.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL S4-171]
Length = 218
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKQIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGA++ V GS + K S +L
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQSPIDKLRA 214
>gi|167465140|ref|ZP_02330229.1| ribulose-phosphate 3-epimerase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322384323|ref|ZP_08058021.1| ribulose-phosphate 3-epimerase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321150825|gb|EFX44262.1| ribulose-phosphate 3-epimerase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 220
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 141/219 (64%), Gaps = 3/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADFS+LG+EI+ + + GA IH DVMDG FVPN++ G ++ ++R ++
Sbjct: 2 VNIAPSILSADFSKLGQEIAEVERGGADWIHVDVMDGHFVPNLTLGPLIVEAIRPHTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D I+ H E+ H+ R+L I +G K GV +NP TP+
Sbjct: 62 LDVHLMIENPDQYIPAFAKAGADWISVHVEACRHLHRTLHLIKELGVKAGVVLNPATPLE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---SLEVDGGVTSR 181
++E V+ ++DM+L+MTVNPGFGGQ I + +PKI+ +A + +R + +EVDGG+ +
Sbjct: 122 MVEHVLGDLDMVLLMTVNPGFGGQSFIPTVVPKIKALRAKLLERGLGHVLIEVDGGIQEK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V+AG D+LV GS+ F ++ +R+ + A
Sbjct: 182 TASLVVEAGGDVLVAGSAVFGKEDRAEAIRRIKSAARQA 220
>gi|113476213|ref|YP_722274.1| ribulose-phosphate 3-epimerase [Trichodesmium erythraeum IMS101]
gi|110167261|gb|ABG51801.1| ribulose-5-phosphate 3-epimerase [Trichodesmium erythraeum IMS101]
Length = 236
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 145/226 (64%), Gaps = 7/226 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PSIL+ADFSRLG+E+ + +AGA IH DVMDG FVPNI+ G ++++LR +
Sbjct: 6 KKPIVISPSILSADFSRLGDEVRAVDQAGADWIHIDVMDGRFVPNITIGPLIVKALRPVT 65
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 66 KKPLDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V+D D++LIM+VNPGFGGQ I + I KIR+ + + R ++ +EVDGG
Sbjct: 126 STPLELIEYVLDLCDLVLIMSVNPGFGGQSFIPTVISKIRKLREMCDARGLNPWIEVDGG 185
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + N +++AGA+ +V GS+ F YA+ +N ++ S +
Sbjct: 186 LKTDNTWQVLEAGANAIVAGSAVFKAND---YAEAINGIRNSKRPV 228
>gi|23501737|ref|NP_697864.1| ribulose-phosphate 3-epimerase [Brucella suis 1330]
gi|161618812|ref|YP_001592699.1| ribulose-phosphate 3-epimerase [Brucella canis ATCC 23365]
gi|225852362|ref|YP_002732595.1| ribulose-phosphate 3-epimerase [Brucella melitensis ATCC 23457]
gi|254701614|ref|ZP_05163442.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 5 str. 513]
gi|254704160|ref|ZP_05165988.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 3 str. 686]
gi|254706939|ref|ZP_05168767.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M163/99/10]
gi|254709953|ref|ZP_05171764.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis B2/94]
gi|256031446|ref|ZP_05445060.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M292/94/1]
gi|256044524|ref|ZP_05447428.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113384|ref|ZP_05454238.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 3 str.
Ether]
gi|256159567|ref|ZP_05457334.1| ribulose-phosphate 3-epimerase [Brucella ceti M490/95/1]
gi|256254853|ref|ZP_05460389.1| ribulose-phosphate 3-epimerase [Brucella ceti B1/94]
gi|256264139|ref|ZP_05466671.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 2 str.
63/9]
gi|256369278|ref|YP_003106786.1| ribulose-phosphate 3-epimerase [Brucella microti CCM 4915]
gi|260168580|ref|ZP_05755391.1| ribulose-phosphate 3-epimerase [Brucella sp. F5/99]
gi|260563877|ref|ZP_05834363.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str. 16M]
gi|260566592|ref|ZP_05837062.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 4 str. 40]
gi|261222035|ref|ZP_05936316.1| ribulose-phosphate 3-epimerase [Brucella ceti B1/94]
gi|261314404|ref|ZP_05953601.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M163/99/10]
gi|261317500|ref|ZP_05956697.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis B2/94]
gi|261752166|ref|ZP_05995875.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 5 str. 513]
gi|261754827|ref|ZP_05998536.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 3 str. 686]
gi|261758053|ref|ZP_06001762.1| ribulose-phosphate 3-epimerase [Brucella sp. F5/99]
gi|265988535|ref|ZP_06101092.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M292/94/1]
gi|265990949|ref|ZP_06103506.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994786|ref|ZP_06107343.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 3 str.
Ether]
gi|265997999|ref|ZP_06110556.1| ribulose-phosphate 3-epimerase [Brucella ceti M490/95/1]
gi|294852203|ref|ZP_06792876.1| ribulose-phosphate 3-epimerase [Brucella sp. NVSL 07-0026]
gi|23347663|gb|AAN29779.1| ribulose-phosphate 3-epimerase [Brucella suis 1330]
gi|161335623|gb|ABX61928.1| ribulose-phosphate 3-epimerase [Brucella canis ATCC 23365]
gi|225640727|gb|ACO00641.1| ribulose-phosphate 3-epimerase [Brucella melitensis ATCC 23457]
gi|255999438|gb|ACU47837.1| ribulose-phosphate 3-epimerase [Brucella microti CCM 4915]
gi|260153893|gb|EEW88985.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str. 16M]
gi|260156110|gb|EEW91190.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 4 str. 40]
gi|260920619|gb|EEX87272.1| ribulose-phosphate 3-epimerase [Brucella ceti B1/94]
gi|261296723|gb|EEY00220.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis B2/94]
gi|261303430|gb|EEY06927.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M163/99/10]
gi|261738037|gb|EEY26033.1| ribulose-phosphate 3-epimerase [Brucella sp. F5/99]
gi|261741919|gb|EEY29845.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 5 str. 513]
gi|261744580|gb|EEY32506.1| ribulose-phosphate 3-epimerase [Brucella suis bv. 3 str. 686]
gi|262552467|gb|EEZ08457.1| ribulose-phosphate 3-epimerase [Brucella ceti M490/95/1]
gi|262765899|gb|EEZ11688.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 3 str.
Ether]
gi|263001733|gb|EEZ14308.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094358|gb|EEZ18203.1| ribulose-phosphate 3-epimerase [Brucella melitensis bv. 2 str.
63/9]
gi|264660732|gb|EEZ30993.1| ribulose-phosphate 3-epimerase [Brucella pinnipedialis M292/94/1]
gi|294820792|gb|EFG37791.1| ribulose-phosphate 3-epimerase [Brucella sp. NVSL 07-0026]
gi|326408868|gb|ADZ65933.1| ribulose-phosphate 3-epimerase [Brucella melitensis M28]
gi|326538586|gb|ADZ86801.1| ribulose-phosphate 3-epimerase [Brucella melitensis M5-90]
Length = 225
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|306841916|ref|ZP_07474596.1| ribulose-phosphate 3-epimerase [Brucella sp. BO2]
gi|306288046|gb|EFM59448.1| ribulose-phosphate 3-epimerase [Brucella sp. BO2]
Length = 225
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 107/214 (50%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ ADAGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFADAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|237815281|ref|ZP_04594279.1| ribulose-phosphate 3-epimerase [Brucella abortus str. 2308 A]
gi|237790118|gb|EEP64328.1| ribulose-phosphate 3-epimerase [Brucella abortus str. 2308 A]
Length = 272
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA H DVMDG FVPNI+FG V++++R
Sbjct: 48 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWAHIDVMDGHFVPNITFGPQVVKAIRPR 106
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 107 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 166
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 167 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 226
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 227 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 260
>gi|313623273|gb|EFR93517.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL J1-023]
Length = 218
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENYGADYIHVDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISTFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K AGA++ V GS + K + +L +
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 215
>gi|16800998|ref|NP_471266.1| ribulose-phosphate 3-epimerase [Listeria innocua Clip11262]
gi|16414433|emb|CAC97162.1| lin1932 [Listeria innocua Clip11262]
Length = 218
Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENYGADYIHVDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K AGA++ V GS + K + +L +
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 215
>gi|239826571|ref|YP_002949195.1| ribulose-phosphate 3-epimerase [Geobacillus sp. WCH70]
gi|239806864|gb|ACS23929.1| ribulose-phosphate 3-epimerase [Geobacillus sp. WCH70]
Length = 221
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 142/212 (66%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RL EEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSADFARLAEEIRDVEQGGADYIHVDVMDGHFVPNITIGPLIVEAIRPITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG D ++ H E+ PH+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEQPDRYIPAFAKAGADYLSVHVEACPHLHRTIHLIKEQGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ +ID++D++L+MTVNPGFGGQ+ I S +PKIRQ L+ +R + +EVDGG+ ++
Sbjct: 122 MIQHIIDDVDLVLLMTVNPGFGGQKFIPSVLPKIRQVAQLVKERGRFVEIEVDGGINAKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA++LV GS+ +N++ + + +
Sbjct: 182 ARLCMEAGANVLVAGSAIYNERDRAAAIRAIR 213
>gi|254718954|ref|ZP_05180765.1| ribulose-phosphate 3-epimerase [Brucella sp. 83/13]
gi|265983944|ref|ZP_06096679.1| ribulose-phosphate 3-epimerase [Brucella sp. 83/13]
gi|306838815|ref|ZP_07471646.1| ribulose-phosphate 3-epimerase [Brucella sp. NF 2653]
gi|264662536|gb|EEZ32797.1| ribulose-phosphate 3-epimerase [Brucella sp. 83/13]
gi|306406099|gb|EFM62347.1| ribulose-phosphate 3-epimerase [Brucella sp. NF 2653]
Length = 225
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 180 ETAGSVVAAGANILVAGSAIYKGNSVESYRANID 213
>gi|116873253|ref|YP_850034.1| ribulose-phosphate 3-epimerase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742131|emb|CAK21255.1| ribulose-phosphate 3-epimerase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 218
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K AGA++ V GS + K + +L +
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 215
>gi|148559803|ref|YP_001258825.1| ribulose-phosphate 3-epimerase [Brucella ovis ATCC 25840]
gi|148371060|gb|ABQ61039.1| ribulose-phosphate 3-epimerase [Brucella ovis ATCC 25840]
Length = 225
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 105/214 (49%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLG+E+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGKEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|256060955|ref|ZP_05451113.1| ribulose-phosphate 3-epimerase [Brucella neotomae 5K33]
gi|261324957|ref|ZP_05964154.1| ribulose-phosphate 3-epimerase [Brucella neotomae 5K33]
gi|261300937|gb|EEY04434.1| ribulose-phosphate 3-epimerase [Brucella neotomae 5K33]
Length = 225
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 105/214 (49%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ H RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGRHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|220921731|ref|YP_002497032.1| ribulose-phosphate 3-epimerase [Methylobacterium nodulans ORS 2060]
gi|219946337|gb|ACL56729.1| ribulose-phosphate 3-epimerase [Methylobacterium nodulans ORS 2060]
Length = 227
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 110/220 (50%), Positives = 153/220 (69%), Gaps = 1/220 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+RLGEE+ + AGA IH DVMDG FVPNI+ G DV+++LR +
Sbjct: 1 MTRPIVIAPSILSADFARLGEEVRAVVAAGADWIHVDVMDGHFVPNITIGPDVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FD HLMI+ D ++ A AG D IT H E+ PH+ R+L+TI A+GK+ GVAINP
Sbjct: 61 TDAHFDVHLMIAPADPYLEAFAKAGADTITVHAEAGPHLHRTLQTIRALGKRAGVAINPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP A +E V+D D++L MTVNPGFGGQ I S + + +A++G R I +EVDGG+T+
Sbjct: 121 TPAASVEPVLDLADLVLCMTVNPGFGGQSFIPSVCETVSRVRAMVGGRDIDIEVDGGITA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++V+AGA+ LV GS+ F G +YA + ++++A
Sbjct: 181 ETAPAVVRAGANALVAGSATFRG-GRDAYAPNIAAIRQAA 219
>gi|62289796|ref|YP_221589.1| Rpe, ribulose-phosphate 3-epimerase [Brucella abortus bv. 1 str.
9-941]
gi|82699723|ref|YP_414297.1| ribulose-phosphate 3-epimerase [Brucella melitensis biovar Abortus
2308]
gi|189024037|ref|YP_001934805.1| Ribulose-phosphate 3-epimerase [Brucella abortus S19]
gi|254689101|ref|ZP_05152355.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 6 str. 870]
gi|254693584|ref|ZP_05155412.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 3 str. Tulya]
gi|254697234|ref|ZP_05159062.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 2 str.
86/8/59]
gi|254730133|ref|ZP_05188711.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 4 str. 292]
gi|256257350|ref|ZP_05462886.1| Ribulose-phosphate 3-epimerase [Brucella abortus bv. 9 str. C68]
gi|260545457|ref|ZP_05821198.1| ribulose-phosphate 3-epimerase [Brucella abortus NCTC 8038]
gi|260754599|ref|ZP_05866947.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 6 str. 870]
gi|260757822|ref|ZP_05870170.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 4 str. 292]
gi|260761645|ref|ZP_05873988.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 2 str.
86/8/59]
gi|260883626|ref|ZP_05895240.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 9 str. C68]
gi|261213849|ref|ZP_05928130.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 3 str. Tulya]
gi|297248199|ref|ZP_06931917.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 5 str. B3196]
gi|62195928|gb|AAX74228.1| Rpe, ribulose-phosphate 3-epimerase [Brucella abortus bv. 1 str.
9-941]
gi|82615824|emb|CAJ10825.1| Ribulose-phosphate 3-epimerase [Brucella melitensis biovar Abortus
2308]
gi|189019609|gb|ACD72331.1| Ribulose-phosphate 3-epimerase [Brucella abortus S19]
gi|260096864|gb|EEW80739.1| ribulose-phosphate 3-epimerase [Brucella abortus NCTC 8038]
gi|260668140|gb|EEX55080.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 4 str. 292]
gi|260672077|gb|EEX58898.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 2 str.
86/8/59]
gi|260674707|gb|EEX61528.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 6 str. 870]
gi|260873154|gb|EEX80223.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 9 str. C68]
gi|260915456|gb|EEX82317.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 3 str. Tulya]
gi|297175368|gb|EFH34715.1| ribulose-phosphate 3-epimerase [Brucella abortus bv. 5 str. B3196]
Length = 225
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWAHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|163843121|ref|YP_001627525.1| ribulose-phosphate 3-epimerase [Brucella suis ATCC 23445]
gi|163673844|gb|ABY37955.1| ribulose-phosphate 3-epimerase [Brucella suis ATCC 23445]
Length = 225
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 105/214 (49%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++ R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVSDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|308173542|ref|YP_003920247.1| ribulose-5-phosphate 3-epimerase [Bacillus amyloliquefaciens DSM 7]
gi|307606406|emb|CBI42777.1| ribulose-5-phosphate 3-epimerase [Bacillus amyloliquefaciens DSM 7]
Length = 217
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 141/214 (65%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFASLGEEIKDVEKGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIENPDRYIPSFAKAGADILSVHAEACPHLHRTIQLIKEQGIKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
I+E VIDE+D++L+MTVNPGFGGQ+ I S +PKIRQ K + ++ +S +EVDGGV
Sbjct: 122 IIEHVIDELDLVLLMTVNPGFGGQRFIHSVLPKIRQVKQMAEEKGLSELLIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA+LLV GS+ +NQ + +
Sbjct: 182 TAPLCAEAGANLLVAGSAVYNQPDRKKAIAEIRN 215
>gi|218246455|ref|YP_002371826.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 8801]
gi|257059498|ref|YP_003137386.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 8802]
gi|218166933|gb|ACK65670.1| Ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 8801]
gi|256589664|gb|ACV00551.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 8802]
Length = 234
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 98/223 (43%), Positives = 143/223 (64%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I I PSIL+ADFSRLGEEI + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 5 TKPIVIAPSILSADFSRLGEEIQAVDKAGADWIHVDVMDGRFVPNITIGPLIVSAIRPYT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 65 QKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I + + KIR+ + + +R + +EVDGG
Sbjct: 125 STPLELIEYVLELCDLVLIMSVNPGFGGQSFIPAVVSKIRKLRQMCDERGLDPWIEVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ N +++AGA+ +V GS+ FN + + + K+ A
Sbjct: 185 LKGGNTWQVLEAGANAIVAGSAVFNAPNYAEAIEGIRNSKRPA 227
>gi|47093055|ref|ZP_00230833.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|226224421|ref|YP_002758528.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes Clip81459]
gi|254826140|ref|ZP_05231141.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|254852725|ref|ZP_05242073.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|254933290|ref|ZP_05266649.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|254993904|ref|ZP_05276094.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-064]
gi|255522567|ref|ZP_05389804.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-175]
gi|290893052|ref|ZP_06556041.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|300763869|ref|ZP_07073866.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|47018556|gb|EAL09311.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|225876883|emb|CAS05592.1| Putative ribulose-5-phosphate 3-epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258606048|gb|EEW18656.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|290557412|gb|EFD90937.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|293584850|gb|EFF96882.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|293595380|gb|EFG03141.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|300515605|gb|EFK42655.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|313608150|gb|EFR84202.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL F2-208]
gi|328473545|gb|EGF44382.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 220]
gi|332312259|gb|EGJ25354.1| Ribulose-phosphate 3-epimerase [Listeria monocytogenes str. Scott
A]
Length = 218
Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K AGA++ V GS + K + +L +
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 215
>gi|150390537|ref|YP_001320586.1| ribulose-phosphate 3-epimerase [Alkaliphilus metalliredigens QYMF]
gi|149950399|gb|ABR48927.1| Ribulose-phosphate 3-epimerase [Alkaliphilus metalliredigens QYMF]
Length = 220
Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQ+ PSIL+ADF+ L +EI + +AG +H DVMDG FVPNI+ G +I+SL++ +
Sbjct: 2 IQLAPSILSADFANLEQEIKKVEEAGCDMLHIDVMDGHFVPNITLGPPIIKSLKNKTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I +AG DIIT H E+ H+ R+++ I G K VA+NP TP+
Sbjct: 62 FDVHLMIENPDQYIAQFVEAGADIITVHSETCIHLHRTIQLIKGCGIKAAVALNPSTPLV 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E+V++E+DM+L+MTVNPGFGGQ+LI + + KI + K +I +R I ++VDGGV N
Sbjct: 122 MIENVLEELDMVLLMTVNPGFGGQKLIPNMLEKIARLKRMIDERGLKIDIQVDGGVNLEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + +AGA+++V GS+ FN KRL +
Sbjct: 182 IKQIAEAGANIIVAGSAIFNSTDIPETVKRLKE 214
>gi|47096539|ref|ZP_00234129.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|224500049|ref|ZP_03668398.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes Finland
1988]
gi|254829187|ref|ZP_05233874.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|254831580|ref|ZP_05236235.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 10403S]
gi|254899485|ref|ZP_05259409.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J0161]
gi|254912376|ref|ZP_05262388.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
gi|254936703|ref|ZP_05268400.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|284802264|ref|YP_003414129.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 08-5578]
gi|284995406|ref|YP_003417174.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 08-5923]
gi|47015071|gb|EAL06014.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|258601597|gb|EEW14922.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258609300|gb|EEW21908.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|284057826|gb|ADB68767.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 08-5578]
gi|284060873|gb|ADB71812.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 08-5923]
gi|293590358|gb|EFF98692.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
Length = 218
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ K+ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKEIVDKKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K AGA++ V GS + K + +L +
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 215
>gi|298491883|ref|YP_003722060.1| ribulose-phosphate 3-epimerase ['Nostoc azollae' 0708]
gi|298233801|gb|ADI64937.1| ribulose-phosphate 3-epimerase ['Nostoc azollae' 0708]
Length = 235
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 143/221 (64%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PSIL+ADFSRLG++I + KAGA IH DVMDG FVPNI+ G+ V+ ++R +
Sbjct: 7 KKPIVISPSILSADFSRLGDDIRAVDKAGADWIHVDVMDGRFVPNITIGSLVVEAIRPIT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 67 TKPLDVHLMIVEPEKYVEGFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I S +PKIRQ + + +R + +EVDGG
Sbjct: 127 GTPLELIEYVLELCDLVLIMSVNPGFGGQSFIPSVVPKIRQLRQMCDERGLDPWIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + N +++AGA+ +V GS+ FN K + + K+
Sbjct: 187 LKANNTWQVLEAGANAIVAGSAVFNAPDYAEAIKNIRNSKR 227
>gi|328553525|gb|AEB24017.1| ribulose-phosphate 3-epimerase [Bacillus amyloliquefaciens TA208]
gi|328911683|gb|AEB63279.1| ribulose-5-phosphate 3-epimerase [Bacillus amyloliquefaciens LL3]
Length = 217
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 141/214 (65%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFASLGEEIKDVEKGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIENPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGIKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
I+E VIDE+D++L+MTVNPGFGGQ+ I S +PKIRQ K + ++ +S +EVDGGV
Sbjct: 122 IIEHVIDELDLVLLMTVNPGFGGQRFIHSVLPKIRQVKQMAEEKGLSELLIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA+LLV GS+ +NQ + +
Sbjct: 182 TAPLCAEAGANLLVAGSAVYNQPDRKKAIAEIRN 215
>gi|284052726|ref|ZP_06382936.1| ribulose-phosphate 3-epimerase [Arthrospira platensis str. Paraca]
gi|291571673|dbj|BAI93945.1| ribulose-phosphate 3-epimerase [Arthrospira platensis NIES-39]
Length = 233
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 145/221 (65%), Gaps = 7/221 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
S+ I PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 6 KSVVIAPSILSADFSRLGEEIRAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPVTK 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A AG DII+ H E +SPH+ R+L I GK++GV +NP
Sbjct: 66 KPLDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLNLIRECGKQSGVVLNPS 125
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ ++E V+D D++LIM+VNPGFGGQ+ I + +PKIRQ + + +R + +EVDGG+
Sbjct: 126 TPLELIEYVLDVCDLVLIMSVNPGFGGQKFIPTVVPKIRQLRQMCDERGLDPWIEVDGGL 185
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ FN Y++ + ++ S
Sbjct: 186 KVDNAWQVLEAGANAIVAGSAVFNADN---YSQAIAGIRNS 223
>gi|217964029|ref|YP_002349707.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|217333299|gb|ACK39093.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|307571400|emb|CAR84579.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes L99]
Length = 218
Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGA++ V GS + K + +L
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRA 214
>gi|315282819|ref|ZP_07871142.1| ribulose-phosphate 3-epimerase [Listeria marthii FSL S4-120]
gi|313613548|gb|EFR87369.1| ribulose-phosphate 3-epimerase [Listeria marthii FSL S4-120]
Length = 218
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHDTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K AGA++ V GS + K + +L +
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 215
>gi|46908050|ref|YP_014439.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|46881320|gb|AAT04616.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
Length = 218
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRYYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ ++ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKKIVDEKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K AGA++ V GS + K + +L +
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 215
>gi|94268026|ref|ZP_01291064.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
gi|94270382|ref|ZP_01291727.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
gi|93450824|gb|EAT01859.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
gi|93451764|gb|EAT02526.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
Length = 225
Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 141/219 (64%), Gaps = 5/219 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGEEI + AGA IH DVMDG FVPN++ G V+ + R ++
Sbjct: 10 RLAPSILSADFARLGEEIRAVEAAGADIIHVDVMDGHFVPNLTIGPPVVAAARRVTELPL 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + ++ A AG D IT H E+ H+ R++ I +GK+ G+ +NP T +A
Sbjct: 70 DVHLMMVNPQDYVEDFARAGADWITIHVETGYHLHRTIHRIKELGKRAGLVLNPGTSLAS 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ ++ E+D++++M+VNPGFGGQ I S + KIRQ + +I +R + +E+DGGVT I
Sbjct: 130 LDYLLAEVDLVMLMSVNPGFGGQSFIPSALAKIRQLRQMIDQRGLKVEIEIDGGVTPATI 189
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AG D+ V GS+ F + YA + +L++ ALA
Sbjct: 190 GEIYRAGTDICVAGSAVFGRDD---YAGAITELRQQALA 225
>gi|210622421|ref|ZP_03293153.1| hypothetical protein CLOHIR_01101 [Clostridium hiranonis DSM 13275]
gi|210154237|gb|EEA85243.1| hypothetical protein CLOHIR_01101 [Clostridium hiranonis DSM 13275]
Length = 217
Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 145/216 (67%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+RL E++ + KAG + +H DVMDG FVPNI+ G +++SLR + V
Sbjct: 2 VKLAPSILSADFARLLEDVKKVEKAGCEYLHIDVMDGHFVPNITLGPGIVKSLRKDVNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D++I AGCDIIT H E+ H+ R+++ I + G K GV +NP T +
Sbjct: 62 FDAHLMIENPDNYIEEFVKAGCDIITVHVEACTHLHRTIQNIKSHGIKAGVVLNPATSLD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ V+D++DM+L+M+VNPGFGGQ I KIR+ + +I +R ++ +EVDGGV N
Sbjct: 122 TIKYVLDDVDMVLLMSVNPGFGGQSYIPCVTEKIRELRKMIDERGLNVEIEVDGGVKPSN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V+AGAD+ V GS+ F + + + L + K
Sbjct: 182 IKEVVEAGADVCVAGSAIFGKDDIDAAVRELRESAK 217
>gi|56419713|ref|YP_147031.1| ribulose-phosphate 3-epimerase [Geobacillus kaustophilus HTA426]
gi|56379555|dbj|BAD75463.1| ribulose-phosphate 3-epimerase [Geobacillus kaustophilus HTA426]
Length = 220
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RL EEI ++ + GA IH D+MDG FVPN++FG V+ ++R +
Sbjct: 4 IRIAPSILSADFARLAEEIRSVEEGGADWIHVDIMDGHFVPNLTFGPPVVAAIRPVTKLP 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D +I A AG D+I+ H E+ H+ R++ I G K GV +NP TPV
Sbjct: 64 LDVHLMIADPDRYIPAFAKAGADVISVHVEACVHLHRTIHFIKEQGVKAGVVLNPHTPVE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ VI ++D++L+MTVNPGFGGQ I + +PKIR+ + +++ + +EVDGG+ +
Sbjct: 124 MIRHVIGDVDLVLLMTVNPGFGGQAFIPAVVPKIREVARMASEQNKEVDIEVDGGINAET 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V+AGA++LV GS+ +N++ + + L +
Sbjct: 184 APLCVEAGANVLVAGSAIYNERDRAAAIRTLRE 216
>gi|306844057|ref|ZP_07476652.1| ribulose-phosphate 3-epimerase [Brucella sp. BO1]
gi|306275812|gb|EFM57536.1| ribulose-phosphate 3-epimerase [Brucella sp. BO1]
Length = 225
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 106/209 (50%), Positives = 149/209 (71%), Gaps = 1/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR+ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
S+V AGA++LV GS+ + SY
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESY 208
>gi|114328805|ref|YP_745962.1| ribulose-phosphate 3-epimerase [Granulibacter bethesdensis CGDNIH1]
gi|114316979|gb|ABI63039.1| ribulose-phosphate 3-epimerase [Granulibacter bethesdensis CGDNIH1]
Length = 224
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 109/219 (49%), Positives = 147/219 (67%), Gaps = 1/219 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I I PSIL+ADF+RLG E+S++ AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 5 SSEIIIAPSILSADFARLGAEVSDVIDAGADWIHVDVMDGHFVPNITIGPAVVQALRPLT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D V D HLMI+ D ++ A AG DIIT H E+ PH+ RSL I +GK+ GVAI P T
Sbjct: 65 DRVLDTHLMITPADPYLEAFAKAGSDIITIHAEAGPHVDRSLAHIRQLGKQAGVAICPGT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P + +E V+D +D+IL+MTV PGFGGQ I + + KIR+ +A+IG R I LEVDGG+T
Sbjct: 125 PESAIEYVLDRLDLILVMTVEPGFGGQSFIPAMVEKIRRVRAMIGNRPIRLEVDGGITPD 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I++ V+AGAD V GS+ F +Y + L+ +A
Sbjct: 185 TIRACVEAGADTFVAGSAVFKG-NRDAYENAITALRTNA 222
>gi|218442157|ref|YP_002380486.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7424]
gi|218174885|gb|ACK73618.1| Ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7424]
Length = 235
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 96/222 (43%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I I PSIL+ADFSRLGEEI + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 7 TKPIVISPSILSADFSRLGEEIQAVDKAGADWIHVDVMDGRFVPNITIGPLIVEAIRPYT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I GK+ GV +NP
Sbjct: 67 KKPLDVHLMIVEPEKYVPDFAKAGADIISVHAEHNASPHLHRTLGQIREFGKQAGVVLNP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I + KI++ + + ++ + +EVDGG
Sbjct: 127 STPLELIEYVLELCDLVLIMSVNPGFGGQSFIPEVVSKIQKLRQMCDEKGLDPWIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F Y+K + ++ S
Sbjct: 187 LKPDNTWQVLEAGANAIVAGSAVFKA---ADYSKAIEGIRHS 225
>gi|33865649|ref|NP_897208.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 8102]
gi|33632819|emb|CAE07630.1| ribulose-5-phosphate 3-epimerase [Synechococcus sp. WH 8102]
Length = 258
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 93/221 (42%), Positives = 137/221 (61%), Gaps = 5/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADFSRLG+E+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 34 TKPLVISPSILSADFSRLGDEVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 93
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 94 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKLAGAVLNPST 153
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ LE ++ D++LIM+VNPGFGGQ IE+ + KI + + +R + +EVDGGV
Sbjct: 154 RLDTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKISDLRRMCDERGLDPWIEVDGGVK 213
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ N +++AGA+ +V GS FNQ YA+ + ++ S+
Sbjct: 214 AGNAWKVIEAGANAIVSGSGVFNQPD---YAEAIKGIRNSS 251
>gi|186681977|ref|YP_001865173.1| ribulose-phosphate 3-epimerase [Nostoc punctiforme PCC 73102]
gi|186464429|gb|ACC80230.1| ribulose-phosphate 3-epimerase [Nostoc punctiforme PCC 73102]
Length = 235
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 143/221 (64%), Gaps = 7/221 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 8 KPIVISPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLIVEAIRPVTT 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GKK GV +NP
Sbjct: 68 KPLDVHLMIVEPEKYVEGFAKAGADIISVHCEHNASPHLHRTLGQIKELGKKAGVVLNPG 127
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
+P+ ++E V+D D++LIM+VNPGFGGQ I +PKIR+ + + +R + +EVDGG+
Sbjct: 128 SPLELIEYVLDLCDLVLIMSVNPGFGGQSFIPGVLPKIRKLRQMCDERGLDPWIEVDGGL 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ FN K YA+ + ++ S
Sbjct: 188 KANNTWQVLEAGANAIVAGSAVFNAKD---YAEAITSIRNS 225
>gi|15615065|ref|NP_243368.1| ribulose-phosphate 3-epimerase [Bacillus halodurans C-125]
gi|10175122|dbj|BAB06221.1| ribulose-phosphate 3-epimerase [Bacillus halodurans C-125]
Length = 216
Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG EI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFANLGNEIQDVERGGADYIHVDVMDGHFVPNITIGPLIVDAIRPVTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DIIT H E+ PH+ R+L I G K GV +NP TPV+
Sbjct: 62 LDVHLMIEQPDGYIPAFAKAGADIITVHVEACPHLHRTLHLIKESGVKAGVVLNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ V+ ++DM+L MTVNPGFGGQ+ I S +PK+++ +L ++ + +EVDGGV
Sbjct: 122 SIQHVLSDVDMVLFMTVNPGFGGQRFIPSVLPKLKELASLKKEQGLTFEIEVDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K V+AGA++LV GS+ FN++ + K +
Sbjct: 182 AKQCVEAGANVLVAGSAVFNEEDRAAAIKGIR 213
>gi|315303721|ref|ZP_07874233.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
gi|313627908|gb|EFR96529.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
Length = 218
Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFANLARDIKEVENCGADYIHVDVMDGHFVPNITFGPAVVKAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG D IT H E+ H+ R+L+ I G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDMYIPEFAKAGADYITVHVEACTHLHRTLQLIRTYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K +I ++ I +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKITAFKQIIDEKELDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGA++ V GS + K S +L
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQSPIDKLRA 214
>gi|225181335|ref|ZP_03734779.1| Ribulose-phosphate 3-epimerase [Dethiobacter alkaliphilus AHT 1]
gi|225167916|gb|EEG76723.1| Ribulose-phosphate 3-epimerase [Dethiobacter alkaliphilus AHT 1]
Length = 217
Score = 293 bits (752), Expect = 8e-78, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 145/214 (67%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADFSRL +++ + + GA +HFDVMDG FVPN++ G V++SLR+ +D
Sbjct: 2 VKIAPSLLSADFSRLADDVKKVEEGGAHWLHFDVMDGHFVPNLTMGPQVVKSLRNKTDLY 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + ++++ A AG D IT E+ H+ R L+ +G K GVA+NP TP++
Sbjct: 62 FDVHLMIENPENYLEAFAKAGADSITVSAEACTHLHRILQMTRGLGVKAGVALNPATPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E V+D++D++LIM+VNPGFGGQ+ I + +PKIR + ++G+R + ++VDGG+ +
Sbjct: 122 VIEYVLDDVDLVLIMSVNPGFGGQKFIPAAVPKIRALREMLGERPVDIQVDGGINAETAP 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGA +LV G++ F + I K L KK
Sbjct: 182 VVRDAGASVLVAGTAVFGEPDVIQAIKMLQTEKK 215
>gi|108758887|ref|YP_634422.1| ribulose-phosphate 3-epimerase [Myxococcus xanthus DK 1622]
gi|108462767|gb|ABF87952.1| ribulose-phosphate 3-epimerase [Myxococcus xanthus DK 1622]
Length = 219
Score = 293 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 92/221 (41%), Positives = 141/221 (63%), Gaps = 7/221 (3%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ ++I PS+L+ DF RL EE+ I AGA IH DVMDG FVPNI+ G V+ +++
Sbjct: 1 MSRRPVRISPSLLSCDFGRLAEEVRAIEAAGADWIHVDVMDGRFVPNITIGPVVVEAIKR 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLMI + ++ AG D++T H E+SPH+ R+L+ I G K V +NP
Sbjct: 61 VATKPLDVHLMIVEPERYVEAFVKAGADVLTVHVEASPHLHRTLQQIRNAGAKPAVVLNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---SLEVDG 176
TP++ +E+V+ ++DM+L+M+VNPGFGGQ IEST+ ++R+ + ++ R + +EVDG
Sbjct: 121 GTPLSAIEEVLGDVDMVLLMSVNPGFGGQSFIESTVERVRRLRGMLDARGLKDVDIEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G+ + K +V+AGA +LV GS F K YA+ + L+
Sbjct: 181 GINATTAKRVVEAGATVLVAGSYVFGSKD---YAEAIRSLR 218
>gi|94263589|ref|ZP_01287399.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
gi|93456009|gb|EAT06160.1| Ribulose-phosphate 3-epimerase [delta proteobacterium MLMS-1]
Length = 225
Score = 293 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 140/219 (63%), Gaps = 5/219 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGEEI AGA IH DVMDG FVPN++ G V+ + R ++
Sbjct: 10 RLAPSILSADFARLGEEIRAAEAAGADIIHVDVMDGHFVPNLTIGPPVVAAARRVTELPL 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + ++ A AG D IT H E+ H+ R++ I +GK+ G+ +NP T +A
Sbjct: 70 DVHLMMVNPQDYVEDFARAGADWITIHVETGYHLHRTIHRIKELGKRAGLVLNPGTSLAS 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ ++ E+D++++M+VNPGFGGQ I S + KIRQ + +I +R + +E+DGGVT I
Sbjct: 130 LDYLLAEVDLVMLMSVNPGFGGQSFIPSALAKIRQLRQMIDQRGLKVEIEIDGGVTPATI 189
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AG D+ V GS+ F + YA + +L++ ALA
Sbjct: 190 GEIYRAGTDICVAGSAVFGRDD---YAAAITELRQQALA 225
>gi|297530647|ref|YP_003671922.1| ribulose-phosphate 3-epimerase [Geobacillus sp. C56-T3]
gi|297253899|gb|ADI27345.1| ribulose-phosphate 3-epimerase [Geobacillus sp. C56-T3]
Length = 218
Score = 293 bits (752), Expect = 9e-78, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RL EEI ++ + GA IH D+MDG FVPN++FG V+ ++R +
Sbjct: 2 IRIAPSILSADFARLAEEIRSVEEGGADWIHVDIMDGHFVPNLTFGPPVVAAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D +I A AG D+I+ H E+ H+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIADPDRYIPAFAKAGADVISVHVEACVHLHRTIHFIKEQGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ VI ++D++L+MTVNPGFGGQ I + +PKIR+ + +++ + +EVDGG+ +
Sbjct: 122 MIRHVIGDVDLVLLMTVNPGFGGQAFIPAVVPKIREVARMASEQNKEVDIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ V+AGA++LV GS+ +N++ + + L
Sbjct: 182 ARLCVEAGANVLVAGSAIYNERDRAAAIRTLRK 214
>gi|254503382|ref|ZP_05115533.1| ribulose-phosphate 3-epimerase [Labrenzia alexandrii DFL-11]
gi|222439453|gb|EEE46132.1| ribulose-phosphate 3-epimerase [Labrenzia alexandrii DFL-11]
Length = 223
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 109/220 (49%), Positives = 151/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+LA+DFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI +R +
Sbjct: 1 MPREIIIAPSVLASDFSKLGQEVRDVVEAGADWIHLDVMDGHFVPNITFGPDVIAKMRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFD HLMI D ++ A AG DIIT H E++ H+ RSL+ I A+GKK GV++NP
Sbjct: 61 TDKVFDTHLMIEPCDPYLEAFAKAGSDIITVHAEATKHLDRSLQAIRALGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++LE V+D +D+IL+MTVNPGFGGQ+ I + + K + K +IG R I LE+DGGVT
Sbjct: 121 TPESVLEYVLDRLDLILVMTVNPGFGGQKFIGAMVEKTARIKQMIGDRPIDLEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F +Y +N ++ +A
Sbjct: 181 DTAPLVAAAGANVLVAGSAVFKGGTVDAYKTNINAIRTAA 220
>gi|254713953|ref|ZP_05175764.1| ribulose-phosphate 3-epimerase [Brucella ceti M644/93/1]
gi|254716988|ref|ZP_05178799.1| ribulose-phosphate 3-epimerase [Brucella ceti M13/05/1]
gi|261218794|ref|ZP_05933075.1| ribulose-phosphate 3-epimerase [Brucella ceti M13/05/1]
gi|261321707|ref|ZP_05960904.1| ribulose-phosphate 3-epimerase [Brucella ceti M644/93/1]
gi|260923883|gb|EEX90451.1| ribulose-phosphate 3-epimerase [Brucella ceti M13/05/1]
gi|261294397|gb|EEX97893.1| ribulose-phosphate 3-epimerase [Brucella ceti M644/93/1]
Length = 225
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAMLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A+AGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TKAFFDAHLMIAPCDPYLEPFAEAGCDLITVHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +V+D++D+IL+MTVNPGFGGQ+ I + KIR + ++G R I +EVDGG+T
Sbjct: 120 TPAEALTNVLDDLDLILVMTVNPGFGGQKFIAPMLDKIRCVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY ++
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANID 213
>gi|261419376|ref|YP_003253058.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y412MC61]
gi|319766191|ref|YP_004131692.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y412MC52]
gi|261375833|gb|ACX78576.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y412MC61]
gi|317111057|gb|ADU93549.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y412MC52]
Length = 218
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RL EEI ++ + GA IH D+MDG FVPN++FG V+ ++R +
Sbjct: 2 IRIAPSILSADFARLAEEIRSVEEGGADWIHVDIMDGHFVPNLTFGPPVVAAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D +I A AG D+I+ H E+ H+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIADPDRYIPAFAKAGADVISVHVEACVHLHRTIHFIKEQGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ VI ++D++L+MTVNPGFGGQ I + +PKIR+ + +++ + +EVDGG+ +
Sbjct: 122 MIRHVIGDVDLVLLMTVNPGFGGQAFIPAVVPKIREVARMASEQNKEVDIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V+AGA++LV GS+ +N++ + + L
Sbjct: 182 APLCVEAGANVLVAGSAIYNERDRAAAIRTLRK 214
>gi|315122607|ref|YP_004063096.1| D-ribulose-5 phosphate 3-epimerase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496009|gb|ADR52608.1| D-ribulose-5 phosphate 3-epimerase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 225
Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats.
Identities = 175/224 (78%), Positives = 200/224 (89%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M SIQIVPSILAADFSRLGEE+S+ITKAGAKQIHFDVMDG FVPNISFGADVI+SLRSY
Sbjct: 1 MPLSIQIVPSILAADFSRLGEEVSDITKAGAKQIHFDVMDGHFVPNISFGADVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD++FDCHLMISS+DSHI + ADAGCDIIT H E SPHIR+SLRTI AMGKK+G+A+NPE
Sbjct: 61 SDAIFDCHLMISSVDSHIKVFADAGCDIITLHAEFSPHIRQSLRTIRAMGKKSGIALNPE 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV++LE+VIDEIDMILIMTVNPGFGGQQLI T+PKIRQA+ LIGKR I+LEVDGG+ S
Sbjct: 121 TPVSVLENVIDEIDMILIMTVNPGFGGQQLINFTVPKIRQARELIGKRPIALEVDGGIKS 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+SL Q GA+L V GS+ FN+K + SY +RLN+LKKSAL ID
Sbjct: 181 GNIRSLAQEGANLFVAGSAIFNKKEKESYKQRLNELKKSALKID 224
>gi|209524284|ref|ZP_03272834.1| Ribulose-phosphate 3-epimerase [Arthrospira maxima CS-328]
gi|209495375|gb|EDZ95680.1| Ribulose-phosphate 3-epimerase [Arthrospira maxima CS-328]
Length = 281
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 142/220 (64%), Gaps = 4/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
S+ I PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 54 KSVVIAPSILSADFSRLGEEIRAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPVTK 113
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A AG DII+ H E +SPH+ R+L I GK++GV +NP
Sbjct: 114 KPLDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLNLIRECGKQSGVVLNPS 173
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ ++E V+D D++LIM+VNPGFGGQ+ I + +PKIRQ + + +R + +EVDGG+
Sbjct: 174 TPLDLIEYVLDVCDLVLIMSVNPGFGGQKFIPTVVPKIRQLRQMCDERGLDPWIEVDGGL 233
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +++AGA+ +V GS+ FN + + K+
Sbjct: 234 KIDNTWQVLEAGANAIVAGSAVFNADNYSEAIAGIRNSKR 273
>gi|148252061|ref|YP_001236646.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
gi|146404234|gb|ABQ32740.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
Length = 243
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 105/228 (46%), Positives = 148/228 (64%), Gaps = 5/228 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT SI+I PSIL+ADF+ G E I G +H DVMDG FVPNI+FG + R++R
Sbjct: 1 MTFDRSIKIAPSILSADFAAFGAECRAIEAQGCDWVHVDVMDGHFVPNITFGPQLCRAIR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ +V D HLMI+ +D +I+ A+AG D+IT H E+ PH+ R+L+ I A G K GV++N
Sbjct: 61 PHVKTVMDVHLMITPVDPYIHAFAEAGADVITAHVEAGPHLDRTLQAIRAAGAKAGVSLN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TP +E V+D ID++L+MTVNPGFGGQ IE+ +PKIR+ + ++G R I +EVDGGV
Sbjct: 121 PSTPAEAIEFVLDRIDLVLVMTVNPGFGGQSFIEAMVPKIRRLREMVGDRPIHIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN---QKGEISYAKRLNDLKKSALAI 223
T + AGAD+LV GS+ F Y + + ++++A A
Sbjct: 181 TPATAPLVAAAGADVLVAGSAVFKGGSAADPAPYGRNILAIREAATAA 228
>gi|86609495|ref|YP_478257.1| ribulose-phosphate 3-epimerase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558037|gb|ABD02994.1| ribulose-phosphate 3-epimerase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 236
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 146/221 (66%), Gaps = 7/221 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I I PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 11 KPIVIAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPLVVEALRPVTA 70
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI ++++ A AG DII+ H ES + H+ R+L I +GK+ GV +NP
Sbjct: 71 KPLDVHLMIVEPENYVADFAKAGADIISVHAESSSTIHLHRTLSQIKDLGKQAGVVLNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
+P+ +++ V+D +D++LIM+VNPGFGGQ I + +PKIRQ +A+ +R + +EVDGG+
Sbjct: 131 SPLELIQYVLDLVDLVLIMSVNPGFGGQSFIPAVVPKIRQLRAMCDERGLDPWIEVDGGI 190
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F K YA+ + ++ S
Sbjct: 191 KASNAWQVIEAGANAIVAGSAVFKAKD---YAEAIRSIRNS 228
>gi|282898047|ref|ZP_06306042.1| Ribulose-phosphate 3-epimerase [Raphidiopsis brookii D9]
gi|282899634|ref|ZP_06307598.1| Ribulose-phosphate 3-epimerase [Cylindrospermopsis raciborskii
CS-505]
gi|281195513|gb|EFA70446.1| Ribulose-phosphate 3-epimerase [Cylindrospermopsis raciborskii
CS-505]
gi|281197191|gb|EFA72092.1| Ribulose-phosphate 3-epimerase [Raphidiopsis brookii D9]
Length = 236
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 140/220 (63%), Gaps = 4/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I I PSIL+A+FSRLGE+I + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 8 KPIVIAPSILSANFSRLGEDIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVTT 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 68 KPLDVHLMIVEPEKYVEGFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGVVLNPG 127
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ ++E V++ D++LIM+VNPGFGGQ I S +PKIRQ + + ++ + +EVDGG+
Sbjct: 128 TPLQLIEYVLELCDLVLIMSVNPGFGGQSFIPSVVPKIRQLRQMCDEKGLDPWIEVDGGL 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ N +++AGA+ +V GS+ FN + + K+
Sbjct: 188 KANNTWQVLEAGANAIVAGSAVFNAPDYAQAIENIRHSKR 227
>gi|148242355|ref|YP_001227512.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RCC307]
gi|147850665|emb|CAK28159.1| Ribulose-phosphate 3-epimerase [Synechococcus sp. RCC307]
Length = 248
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 142/226 (62%), Gaps = 3/226 (1%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ S+ I PSIL+ADFS+LGE++ + +AGA IH DVMDG FVPNI+ G ++++LR
Sbjct: 22 MSQKSLVISPSILSADFSKLGEDVRAVDQAGADWIHVDVMDGRFVPNITIGPMIVKALRP 81
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP
Sbjct: 82 VTSKPLDVHLMIVEPEKYVEDFAKAGADIISVQVEACPHLHRNLAQIKDLGKKAGAVLNP 141
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ LE ++ D++L+M+VNPGFGGQ IE+ + KIR + + +R + +EVDGG
Sbjct: 142 GTPIDTLEYCLELCDLVLVMSVNPGFGGQSFIENQVDKIRDLRRMCDERGLDPWIEVDGG 201
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + N +++AGA+ +V GS FNQ + + + K+ LA
Sbjct: 202 IKAGNAWKVIEAGANAIVSGSGVFNQPSYAEAIEGIRNSKRPELAA 247
>gi|261405805|ref|YP_003242046.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. Y412MC10]
gi|261282268|gb|ACX64239.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. Y412MC10]
Length = 219
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 138/214 (64%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LG+EI +GA IH DVMDG FVPNI+ G +++++R ++
Sbjct: 2 IKIAPSILSADFAKLGQEIKEAEASGADWIHVDVMDGHFVPNITLGPPIVQAIRPHTGLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG D+IT H E+ PH+ R + I G K GVAINP TP
Sbjct: 62 LDVHLMIEQPELYIADFVKAGADLITVHAETCPHLHRVIHLIKEHGVKAGVAINPATPAH 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+L++V+ ++D++L+MTVNPGFGGQ IE T+ KI Q + I +I +EVDGG+T+
Sbjct: 122 VLQEVLPDVDLVLVMTVNPGFGGQAFIERTVNKIAQLREWISNSDNPNIHIEVDGGITAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+V+AGAD+LV GS+ F + + ++ D
Sbjct: 182 TAPLVVEAGADVLVAGSAVFGKPDRAAAIAQIRD 215
>gi|296282066|ref|ZP_06860064.1| pentose-5-phosphate-3-epimerase [Citromicrobium bathyomarinum
JL354]
Length = 221
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 109/219 (49%), Positives = 147/219 (67%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF+RLGEE+ ++ AGA IH DVMDG FVPN++ G V+++LR +
Sbjct: 1 MTVPL-IAPSILSADFARLGEEVRSVDAAGADWIHIDVMDGHFVPNLTIGPGVVKALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD FD HLM+S +D + A+AG D IT HPE+ PH R+L+TI ++GKK GV +NP
Sbjct: 60 SDKPFDVHLMVSPVDQWLEAFAEAGADHITIHPEAGPHTHRTLQTIRSLGKKAGVVLNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++LE +ID +D++L+M+VNPGFGGQ I+S + KI + +I R I LEVDGGV
Sbjct: 120 TSESVLEYLIDMVDLVLVMSVNPGFGGQSFIDSQLRKIEAIRTMIDATGREIWLEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ V AGAD+LV GS+ F G YA + LK
Sbjct: 180 DAETAPRCVAAGADVLVAGSATFRG-GPDRYAANIERLK 217
>gi|16330729|ref|NP_441457.1| ribulose-phosphate 3-epimerase [Synechocystis sp. PCC 6803]
gi|2829613|sp|P74061|RPE_SYNY3 RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|52695843|pdb|1TQJ|A Chain A, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695844|pdb|1TQJ|B Chain B, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695845|pdb|1TQJ|C Chain C, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695846|pdb|1TQJ|D Chain D, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695847|pdb|1TQJ|E Chain E, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|52695848|pdb|1TQJ|F Chain F, Crystal Structure Of D-Ribulose 5-Phosphate 3-Epimerase
From Synechocystis To 1.6 Angstrom Resolution
gi|1653221|dbj|BAA18137.1| pentose-5-phosphate-3-epimerase [Synechocystis sp. PCC 6803]
Length = 230
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/223 (44%), Positives = 141/223 (63%), Gaps = 7/223 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I + PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R
Sbjct: 1 MSKNIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAIN 118
+ D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GKK G +N
Sbjct: 61 TKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP+ LE V+ D+ILIM+VNPGFGGQ I +PKIR + + +R + +EVDG
Sbjct: 121 PSTPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ N +++AGA+ +V GS+ FN YA+ + ++ S
Sbjct: 181 GLKPNNTWQVLEAGANAIVAGSAVFNAPN---YAEAIAGVRNS 220
>gi|307302629|ref|ZP_07582385.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti BL225C]
gi|307318476|ref|ZP_07597910.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti AK83]
gi|306895816|gb|EFN26568.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti AK83]
gi|306902993|gb|EFN33584.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti BL225C]
Length = 225
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 115/220 (52%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI+SLR +
Sbjct: 1 MTHPIRIAPSILAADFSKLGQEVRDVAEAGADWIHLDVMDGHFVPNITFGPDVIKSLRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D + A AGCDIIT H E+ PH+ RSL+T+ ++GKK GV+INP
Sbjct: 61 TRATFDCHLMIAPADPFLEAFAKAGCDIITVHAEAGPHLHRSLQTVKSLGKKAGVSINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP + +E V+D +D+IL+MTVNPGFGGQ+ + +T KIR+ KA+IG R I +EVDGG+
Sbjct: 121 TPESAIEYVLDTVDLILVMTVNPGFGGQKFVGATEEKIRRIKAMIGSRPIEIEVDGGIAP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA++LV GS+ F +Y + L+ A
Sbjct: 181 DTAGVAAKAGANVLVAGSAIFKGDSVDAYRSAIEVLRTQA 220
>gi|78212783|ref|YP_381562.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9605]
gi|78197242|gb|ABB35007.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9605]
Length = 227
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 140/221 (63%), Gaps = 5/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFARLGEEVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKKAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IE+ + KIR + + ++ + +EVDGG+
Sbjct: 123 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKIRDLRRMCDEKGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ N +++AGA+ +V GS FNQ YA+ + ++ S+
Sbjct: 183 AGNAWKVIEAGANAIVSGSGVFNQPD---YAEAIKGIRNSS 220
>gi|87302820|ref|ZP_01085631.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 5701]
gi|87282703|gb|EAQ74661.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 5701]
Length = 227
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 90/221 (40%), Positives = 136/221 (61%), Gaps = 2/221 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLG+E+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVIAPSILSADFARLGDEVRAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG D I E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 SKPLDVHLMIVEPERYVGDFAKAGADHIYVQVEACPHLHRNLGQIKDLGKKAGAVLNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ I S + K+R+ + + +R + +EVDGG+
Sbjct: 123 PLETLEYCLELCDLVLIMSVNPGFGGQSFIPSAVEKVRRLRRMCDERGLDPWIEVDGGLK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ N +V+AGA+ +V GS+ FN + + + ++ A
Sbjct: 183 ANNTWQVVEAGANAIVAGSAVFNAPDYRAAIEGIRHSRRPA 223
>gi|297583991|ref|YP_003699771.1| ribulose-phosphate 3-epimerase [Bacillus selenitireducens MLS10]
gi|297142448|gb|ADH99205.1| ribulose-phosphate 3-epimerase [Bacillus selenitireducens MLS10]
Length = 214
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 141/212 (66%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSILAA+FS+LGEEI + AGA IH DVMDG FVPNI+FG + ++R +
Sbjct: 2 IKIAPSILAANFSKLGEEIQSAEAAGADYIHVDVMDGHFVPNITFGPLAVDAIRPLTSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I+ +AG D+I+ H E+ PH+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDQYISDFTNAGADLISVHVEACPHLHRTIQLIKSTGAKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E +++++D++L+MTVNPGFGGQ I S +PKI + KAL +R + +EVDGGV +
Sbjct: 122 AIEPILEDVDLVLLMTVNPGFGGQSFIHSVLPKIAEVKALADQRHPELEIEVDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGA++LV GS+ F + + L
Sbjct: 182 ARLCAEAGANVLVAGSAVFGKTDRKKAVEELR 213
>gi|154685995|ref|YP_001421156.1| ribulose-phosphate 3-epimerase [Bacillus amyloliquefaciens FZB42]
gi|154351846|gb|ABS73925.1| Rpe [Bacillus amyloliquefaciens FZB42]
Length = 216
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 102/218 (46%), Positives = 145/218 (66%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFASLGEEIKDVEKGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIENPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGVKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
++E VI+E+D++L+MTVNPGFGGQ+ I S +PKIRQ K L ++ +S +EVDGGV
Sbjct: 122 MIEHVIEELDLVLLMTVNPGFGGQRFIHSVLPKIRQVKQLAEEKGLSELLIEVDGGVNIE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA+LLV GS+ +NQ K + D++ +
Sbjct: 182 TAPLCTEAGANLLVAGSAVYNQPDR---KKAIADIRNA 216
>gi|116074711|ref|ZP_01471972.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RS9916]
gi|116067933|gb|EAU73686.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RS9916]
Length = 222
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 137/220 (62%), Gaps = 2/220 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFARLGEEVKAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IE+ + KIR + + ++ + +EVDGG+
Sbjct: 123 PIDTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKIRDLRRMCDEKGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ + + + D K+S
Sbjct: 183 GANAWKVIEAGANAIVSGSGVFNQPDYAAAIQGIRDSKRS 222
>gi|253575783|ref|ZP_04853118.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844826|gb|EES72839.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 224
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I I PSIL+A+F++LGEE++++ + GA +H DVMDG FVPN++FG V++++
Sbjct: 1 MSNNIYIAPSILSANFAKLGEEVADVERGGADWLHVDVMDGHFVPNLTFGPLVLQAIAPQ 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + +I A AG +IT H E+ H+ R L I G K GVAINP
Sbjct: 61 TKLPLDVHLMIEKPEEYIPAFAKAGAHLITVHAEACVHLHRVLHLIKEQGVKAGVAINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGG 177
TP + + +V++++D++L+MTVNPGFGGQ I T+ KIRQ KA + + +EVDGG
Sbjct: 121 TPASAVREVLEDVDLVLVMTVNPGFGGQAFIPGTLRKIRQLKAWKDELGLNDLRIEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + +V+AGAD+LV G++ F Q + + +
Sbjct: 181 IAAATAPLVVEAGADVLVAGNAVFGQADRRAAMAEIRE 218
>gi|119509054|ref|ZP_01628205.1| ribulose-phosphate 3-epimerase [Nodularia spumigena CCY9414]
gi|119466220|gb|EAW47106.1| ribulose-phosphate 3-epimerase [Nodularia spumigena CCY9414]
Length = 235
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 139/222 (62%), Gaps = 4/222 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 8 KPIVISPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVTT 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GKK GV +NP
Sbjct: 68 KPLDVHLMIVEPEKYVEDFAKAGADIISVHCEHNASPHLHRTLGQIRELGKKAGVVLNPG 127
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ ++E V+D D+ILIM+VNPGFGGQ I +PKIRQ + + +R + +EVDGG+
Sbjct: 128 TPLVLIEHVLDLCDLILIMSVNPGFGGQSFIPGVLPKIRQLRQMCDERGLDPWIEVDGGL 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ N +++AGA+ +V GS+ F + + K+ A
Sbjct: 188 KANNTWQVLEAGANAIVAGSAVFKAPDYAEAVSSIRNSKRPA 229
>gi|329926583|ref|ZP_08280996.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. HGF5]
gi|328939124|gb|EGG35487.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. HGF5]
Length = 219
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 138/214 (64%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LG+EI +GA IH DVMDG FVPNI+ G +++++R ++
Sbjct: 2 IKIAPSILSADFAKLGQEIKEAEASGADWIHVDVMDGHFVPNITLGPPIVQAIRPHTGLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG D+IT H E+ PH+ R + I G K GVAINP TP
Sbjct: 62 LDVHLMIEQPELYIADFVKAGADLITVHAETCPHLHRVIHLIKEHGVKAGVAINPATPAH 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+L++V+ ++D++L+MTVNPGFGGQ IE T+ KI Q + I +I +EVDGG+T+
Sbjct: 122 VLQEVLPDVDLVLVMTVNPGFGGQAFIERTVSKIAQLREWISNSDNPNIHIEVDGGITAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+V+AGAD+LV GS+ F + + ++ +
Sbjct: 182 TAPLVVEAGADVLVAGSAVFGKPDRAAAIAQIRN 215
>gi|328542605|ref|YP_004302714.1| d-ribulose-5-phosphate 3-epimerase protein [polymorphum gilvum
SL003B-26A1]
gi|326412351|gb|ADZ69414.1| Probable d-ribulose-5-phosphate 3-epimerase protein [Polymorphum
gilvum SL003B-26A1]
Length = 231
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 111/227 (48%), Positives = 160/227 (70%), Gaps = 4/227 (1%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT S I PS+LA+DFSRL +EI + AGA IH DVMDG FVPNI+FG DVI ++R
Sbjct: 1 MTQTSTLIAPSMLASDFSRLRDEIKAVVGAGADWIHLDVMDGHFVPNITFGPDVIAAMRP 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++D VFD HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I A+GKK GV++NP
Sbjct: 61 HTDKVFDTHLMIAPCDLYLEAFAKAGSDIITVHAEAGPHLDRSLQAIRALGKKAGVSLNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP +++E V+D +D++L+M+VNPGFGGQ+ I + + KI + KA+IG R I +EVDGGVT
Sbjct: 121 GTPESVIEYVLDRLDLVLVMSVNPGFGGQKFIPAVVDKIARIKAMIGDRPIDIEVDGGVT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLKKSALAI 223
+ + +AGA++LV GS+ F + YA+++ +++++ A+
Sbjct: 181 AETAPLVARAGANVLVAGSAVFKGGTPETADVYARQIAAIRQASDAV 227
>gi|16803858|ref|NP_465343.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes EGD-e]
gi|224501380|ref|ZP_03669687.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-561]
gi|16411272|emb|CAC99896.1| lmo1818 [Listeria monocytogenes EGD-e]
Length = 218
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFATLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++E+DM+L MTVNPGFGGQ+ I + KI K ++ K+ + +EVDGGV
Sbjct: 123 LQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKEIVDKKGLDIEIEVDGGVDHETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K AGA++ V GS + K + +L +
Sbjct: 183 KLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 215
>gi|158334572|ref|YP_001515744.1| ribulose-phosphate 3-epimerase [Acaryochloris marina MBIC11017]
gi|158304813|gb|ABW26430.1| ribulose-phosphate 3-epimerase [Acaryochloris marina MBIC11017]
Length = 235
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 136/220 (61%), Gaps = 4/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
S I PSIL+ADFSRLGEE+ + KAGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 8 KSTVISPSILSADFSRLGEEVRAVDKAGADWIHVDVMDGRFVPNITIGPLIVDALRPVTQ 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI D ++ A AG DII+ H E+ + H+ R+L I +GK GV +NP
Sbjct: 68 KPLDVHLMIVEPDRYVADFAKAGADIISVHAEASATTHLHRALGQIKELGKMAGVVLNPG 127
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + ++ V++ D++LIM+VNPGFGGQ I +PKIRQ + + +R + +EVDGG+
Sbjct: 128 TSLEQIDYVLELCDLVLIMSVNPGFGGQSFIPGVLPKIRQLRQMCDERGLDPWIEVDGGL 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ N +++AGA+ +V GS+ F K + + K+
Sbjct: 188 KANNTWQVLEAGANAIVAGSAVFKADDYAETIKAIRNSKR 227
>gi|15965509|ref|NP_385862.1| D-ribulose-5-phosphate 3-epimerase protein [Sinorhizobium meliloti
1021]
gi|15074690|emb|CAC46335.1| Probable D-ribulose-5-phosphate 3-epimerase [Sinorhizobium meliloti
1021]
Length = 226
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 115/220 (52%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADFS+LG+E+ ++ +AGA IH DVMDG FVPNI+FG DVI+SLR +
Sbjct: 2 MTHPIRIAPSILAADFSKLGQEVRDVAEAGADWIHLDVMDGHFVPNITFGPDVIKSLRPH 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D + A AGCDIIT H E+ PH+ RSL+T+ ++GKK GV+INP
Sbjct: 62 TRATFDCHLMIAPADPFLEAFAKAGCDIITVHAEAGPHLHRSLQTVKSLGKKAGVSINPA 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP + +E V+D +D+IL+MTVNPGFGGQ+ + +T KIR+ KA+IG R I +EVDGG+
Sbjct: 122 TPESAIEYVLDTVDLILVMTVNPGFGGQKFVGATEEKIRRIKAMIGSRPIEIEVDGGIAP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA++LV GS+ F +Y + L+ A
Sbjct: 182 DTAGVAAKAGANVLVAGSAIFKGDSVDAYRSAIEVLRTQA 221
>gi|222148777|ref|YP_002549734.1| ribulose-phosphate 3-epimerase [Agrobacterium vitis S4]
gi|221735763|gb|ACM36726.1| ribulose-phosphate 3-epimerase [Agrobacterium vitis S4]
Length = 225
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 123/220 (55%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + I PSILAA+FSRLG E++++ +AGA IH DVMDG FVPNISFG VI++LR +
Sbjct: 1 MTPPLLIAPSILAANFSRLGAEVADVVEAGADWIHLDVMDGHFVPNISFGPAVIKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFDCHLMI+ D + ADAGCD IT H E+ PH+ RSL+TI A+GKK GV+INP
Sbjct: 61 TKAVFDCHLMIAPADPFLAAFADAGCDYITVHAEAGPHLHRSLQTIRALGKKAGVSINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV++LE+VID++D+ILIM+VNPGFGGQ I + KI QA+ALIG R I+LEVDGG+T
Sbjct: 121 TPVSMLENVIDDVDLILIMSVNPGFGGQSFIPAAADKIAQARALIGDRPIALEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA++LV GS+ + +G +Y + + L+ +A
Sbjct: 181 ETAPIATKAGANVLVAGSAIYKGQGIDAYRETVTALRHAA 220
>gi|114763378|ref|ZP_01442785.1| ribulose-phosphate 3-epimerase [Pelagibaca bermudensis HTCC2601]
gi|114543916|gb|EAU46927.1| ribulose-phosphate 3-epimerase [Roseovarius sp. HTCC2601]
Length = 233
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 142/221 (64%), Gaps = 3/221 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RSIKIAPSILSADFANFGAEIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLMI+ +D +I A+AG D+IT H E+ PHI R+L+ I A G K GV +NP TP
Sbjct: 65 TFMDVHLMIAPVDPYIEAYAEAGADMITAHVEAGPHIHRTLQAIRAQGVKAGVVLNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ DV+D DM+LIMTVNPGFGGQ+ I S + K R+ + +IG R I +++DGG+T
Sbjct: 125 ADAVADVLDLCDMVLIMTVNPGFGGQKFIHSGVEKTRKIRHMIGDRPIHIQIDGGITPET 184
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSA 220
+V+AGAD+LV GS+ F Y + + ++++A
Sbjct: 185 APLVVEAGADVLVAGSAVFKGGSVDTPEVYGQNMRAIREAA 225
>gi|260426049|ref|ZP_05780028.1| ribulose-phosphate 3-epimerase [Citreicella sp. SE45]
gi|260420541|gb|EEX13792.1| ribulose-phosphate 3-epimerase [Citreicella sp. SE45]
Length = 233
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 140/219 (63%), Gaps = 3/219 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G EI I K GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RSIKIAPSILSADFANFGAEIRAIEKQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLMI+ +D +I A+AG D+IT H E+ PHI R+L+ I A G K GV +NP TP
Sbjct: 65 TFMDVHLMIAPVDPYIEAYAEAGADMITAHIEAGPHIHRTLQAIRAQGVKAGVVLNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
DV+D DM+LIMTVNPGFGGQ+ I S + K R+ + +IG R I +++DGG+T
Sbjct: 125 AEACADVLDLCDMVLIMTVNPGFGGQKFIHSGVEKTRKVRQMIGDRPIHIQIDGGITPET 184
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKK 218
+V+AGAD+LV GS+ F Y + + +++
Sbjct: 185 APLVVEAGADVLVAGSAVFKGGSVDTPEVYGQNMRAIRE 223
>gi|260435784|ref|ZP_05789754.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 8109]
gi|260413658|gb|EEX06954.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 8109]
Length = 227
Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 139/220 (63%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFARLGEEVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKKAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IES + KIR + + ++ + +EVDGG+
Sbjct: 123 PIDTLEYCLELCDLVLIMSVNPGFGGQSFIESQVQKIRDLRRMCDEKGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ YA+ + ++ S
Sbjct: 183 AGNAWKVIEAGANAIVSGSGVFNQPD---YAEAIKGIRNS 219
>gi|254412122|ref|ZP_05025897.1| ribulose-phosphate 3-epimerase [Microcoleus chthonoplastes PCC
7420]
gi|196181088|gb|EDX76077.1| ribulose-phosphate 3-epimerase [Microcoleus chthonoplastes PCC
7420]
Length = 235
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 96/221 (43%), Positives = 144/221 (65%), Gaps = 7/221 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I + PSIL+ADFSRLGE++ + AGA IH DVMDG FVPNI+ G ++++LR ++
Sbjct: 8 KPIVVAPSILSADFSRLGEQVQAVDAAGADWIHVDVMDGRFVPNITIGPLIVKALRPVTE 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A+AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 68 KPLDVHLMIVEPEKYVEDFAEAGADIISVHAEHNASPHLHRTLTQIQELGKQAGVVLNPS 127
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ +++ V+D D++LIM+VNPGFGGQ I +PKIR+ + + +R + +EVDGG+
Sbjct: 128 TPLELIDYVLDVCDLVLIMSVNPGFGGQSFIPGVLPKIRKLRQICDERGLDPWIEVDGGL 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS F Q YAK + ++ S
Sbjct: 188 KADNTWQVLEAGANAIVSGSGVFKQDD---YAKAITGIRNS 225
>gi|95928559|ref|ZP_01311306.1| Ribulose-phosphate 3-epimerase [Desulfuromonas acetoxidans DSM 684]
gi|95135349|gb|EAT17001.1| Ribulose-phosphate 3-epimerase [Desulfuromonas acetoxidans DSM 684]
Length = 217
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 108/213 (50%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RLG EI + +AGA IH DVMDG FVPNI+ GA V+ +LR ++
Sbjct: 2 IKISPSILSADFARLGAEIRTVEQAGADYIHVDVMDGHFVPNITIGAPVVGALRQVTELP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DIIT H E+ PH+ R+++ IH++GKK GV+INP TP
Sbjct: 62 LDVHLMIENPDLYIPDFAKAGSDIITVHQEAVPHLHRTVQLIHSLGKKAGVSINPATPAG 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
LE ++ E+D++L+MTVNPGFGGQ I +T+ KI Q + +I + R I LEVDGGV + N
Sbjct: 122 ALEVIMAEVDLVLVMTVNPGFGGQSFIPATLNKITQLREMIDRTGRDIELEVDGGVKADN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + AGAD+ V GS+ FN + L D
Sbjct: 182 IGEIAAAGADVFVAGSAVFNAPDYTQAIQALRD 214
>gi|220907411|ref|YP_002482722.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7425]
gi|219864022|gb|ACL44361.1| Ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7425]
Length = 238
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 143/221 (64%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ S+ I PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 5 SKSVVIAPSILSADFSRLGEEIRAVDQAGADWIHVDVMDGRFVPNITIGPLIVEAIRPVT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E ++ H+ R+L I +GK+ GV +NP
Sbjct: 65 TKPLDVHLMIVEPERYVADFAKAGADIISVHAESSATIHLHRTLCQIKELGKQAGVVLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
+P+ ++E V++ D+ILIM+VNPGFGGQ I S +PKIRQ + + +R + +EVDGG
Sbjct: 125 ASPLELIEYVLEVCDLILIMSVNPGFGGQGFISSVVPKIRQLRQMCDERGLDPWIEVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + N +++AGA+ +V GS+ FN + + + K+
Sbjct: 185 LKANNTWQVLEAGANAIVAGSAVFNAPDYATAIAGIRNSKR 225
>gi|172035714|ref|YP_001802215.1| ribulose-phosphate 3-epimerase [Cyanothece sp. ATCC 51142]
gi|171697168|gb|ACB50149.1| ribulose-phosphate 3-epimerase [Cyanothece sp. ATCC 51142]
Length = 233
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 143/226 (63%), Gaps = 10/226 (4%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
MT S + I PSIL+ADFSRLG EI + KAGA IH DVMDG FVPNI+ G ++ ++
Sbjct: 1 MTQSTKSTVISPSILSADFSRLGAEIEAVDKAGADWIHVDVMDGRFVPNITIGPLIVDAI 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGV 115
R Y+ D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV
Sbjct: 61 RPYTKKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIRELGKQAGV 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LE 173
+NP TP+ ++E V++ D++LIM+VNPGFGGQ I + KIR+ + + ++ + +E
Sbjct: 121 VLNPSTPLDLIEYVLELCDLVLIMSVNPGFGGQSFIPEMVTKIRKLRQMCDEKGLDPWIE 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
VDGG+ N +++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 181 VDGGLKPANTWQVLEAGANAIVAGSAVFKADD---YAEAIEGIRNS 223
>gi|148239637|ref|YP_001225024.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 7803]
gi|147848176|emb|CAK23727.1| Ribulose-phosphate 3-epimerase [Synechococcus sp. WH 7803]
Length = 227
Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 138/219 (63%), Gaps = 2/219 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ + PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKSLVVSPSILSADFSRLGEEVKAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK+ G +NP T
Sbjct: 63 TKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKQAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
++ LE ++ D++LIM+VNPGFGGQ IE+ + KIR + + ++ + +EVDGGV
Sbjct: 123 SLSTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKIRDLRRMCDEKGLDPWIEVDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +++AGA+ +V GS FNQ + + + D K+
Sbjct: 183 GGNAWKVIEAGANAIVSGSGVFNQPDYAAAIQGIRDSKR 221
>gi|115375781|ref|ZP_01463034.1| ribulose-phosphate 3-epimerase [Stigmatella aurantiaca DW4/3-1]
gi|310824081|ref|YP_003956439.1| ribulose-phosphate 3-epimerase [Stigmatella aurantiaca DW4/3-1]
gi|115367255|gb|EAU66237.1| ribulose-phosphate 3-epimerase [Stigmatella aurantiaca DW4/3-1]
gi|309397153|gb|ADO74612.1| Ribulose-phosphate 3-epimerase [Stigmatella aurantiaca DW4/3-1]
Length = 217
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 142/219 (64%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PS+L+ DFSRL EE+ + AGA IH DVMDG FVPNI+ G ++++++
Sbjct: 1 MSRRVLISPSLLSCDFSRLAEEVRAVEAAGADWIHVDVMDGRFVPNITLGPVIVQAIKRV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + +I A AG +++T H E+SPH+ R+L+ I G K V +NP
Sbjct: 61 ATKPLDVHLMIVEPERYIEAFAKAGANLLTVHVEASPHLHRTLQQIRQAGAKPSVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TP++ +E+V+ E++M+L+M+VNPGFGGQ IE+++ K+R+ +A++ R + +EVDGG+
Sbjct: 121 TPLSAIEEVLGEVEMVLVMSVNPGFGGQSFIEASVDKVRRLRAMLDARGLNTDIEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +V AGA +LV GS F K YAK + L+
Sbjct: 181 NEETARRVVDAGASVLVAGSHVFGAKD---YAKAIASLR 216
>gi|126660277|ref|ZP_01731392.1| ribulose-phosphate 3-epimerase [Cyanothece sp. CCY0110]
gi|126618452|gb|EAZ89206.1| ribulose-phosphate 3-epimerase [Cyanothece sp. CCY0110]
Length = 233
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 143/226 (63%), Gaps = 10/226 (4%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
MT S + I PSIL+ADFSRLG EI + KAGA IH DVMDG FVPNI+ G ++ ++
Sbjct: 1 MTQSTKSTVISPSILSADFSRLGAEIEAVDKAGADWIHVDVMDGRFVPNITIGPLIVDAI 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGV 115
R Y+ D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV
Sbjct: 61 RPYTKKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIRELGKQAGV 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LE 173
+NP TP+ ++E V++ D++LIM+VNPGFGGQ I + KIR+ + + ++ + +E
Sbjct: 121 VLNPSTPLDLIEYVLELCDLVLIMSVNPGFGGQSFIPEMVGKIRKLRQMCDEKGLDPWIE 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
VDGG+ N +++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 181 VDGGLKPGNTWQVLEAGANAIVAGSAVFKADD---YAEAIEGIRNS 223
>gi|315646183|ref|ZP_07899303.1| ribulose-phosphate 3-epimerase [Paenibacillus vortex V453]
gi|315278382|gb|EFU41698.1| ribulose-phosphate 3-epimerase [Paenibacillus vortex V453]
Length = 219
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 137/214 (64%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LG+EI + GA IH DVMDG FVPNI+ G +++++R ++
Sbjct: 2 IKIAPSILSADFAKLGQEIKDAEAGGADWIHVDVMDGHFVPNITLGPPIVQAIRPHTSLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG D+IT H E+ PH+ R + I G K GVAINP TP
Sbjct: 62 LDVHLMIEQPELYIADFVKAGADLITVHAETCPHLHRVIHLIKEHGVKAGVAINPATPAH 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR 181
+L++V+ ++D++L+MTVNPGFGGQ IE T+ KI Q + I +I +EVDGG+T+
Sbjct: 122 VLQEVLPDLDLVLVMTVNPGFGGQAFIERTVNKISQLREWISSSDFPNIHIEVDGGITAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+V+AGAD+LV GS+ F + + + +
Sbjct: 182 TAPLVVEAGADVLVAGSAVFGKPDRAAAIANIRN 215
>gi|138894699|ref|YP_001125152.1| ribulose-phosphate 3-epimerase [Geobacillus thermodenitrificans
NG80-2]
gi|196247681|ref|ZP_03146383.1| Ribulose-phosphate 3-epimerase [Geobacillus sp. G11MC16]
gi|134266212|gb|ABO66407.1| Putative ribulose-5-phosphate 3-epimerase [Geobacillus
thermodenitrificans NG80-2]
gi|196212465|gb|EDY07222.1| Ribulose-phosphate 3-epimerase [Geobacillus sp. G11MC16]
Length = 218
Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RL EEI ++ + GA IH DVMDG FVPN++ G ++ ++R +
Sbjct: 2 IRIAPSILSADFARLAEEIRSVEEGGADWIHVDVMDGHFVPNLTLGPPIVAAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D +I +AG D+I+ H E+ H+ R++ I K GV +NP TPV
Sbjct: 62 LDVHLMITDPDRYIPAFVEAGADLISVHVEACVHLHRTIHFIKEQSVKAGVVLNPHTPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ VI ++D++L+M+VNPGFGGQ I + +PKIR+ L +++ I +EVDGGV ++
Sbjct: 122 MIRHVIADVDLVLLMSVNPGFGGQAFIPAVVPKIREVARLANEQNKKIDIEVDGGVNAKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V+AGA++LV GS+ +N + + L +
Sbjct: 182 APLCVEAGANVLVAGSAIYNNPDRAAAIRALRE 214
>gi|22299912|ref|NP_683159.1| ribulose-phosphate 3-epimerase [Thermosynechococcus elongatus BP-1]
gi|22296097|dbj|BAC09921.1| pentose-5-phosphate-3-epimerase [Thermosynechococcus elongatus
BP-1]
Length = 231
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 142/221 (64%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 3 AKPVVIAPSILSADFSRLGEEIQAVDRAGADWIHVDVMDGRFVPNITIGPLIVEAIRPLT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 63 QKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLCQIRELGKQAGVVLNP 122
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
+P+ ++E V++ D++LIM+VNPGFGGQ+ I + +PKIR+ + L +R + +EVDGG
Sbjct: 123 SSPLELIEYVLEVCDLVLIMSVNPGFGGQKFIPAVLPKIRRLRQLCEERGLDPWIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ N +++AGA+ +V GS+ FN + + + K+
Sbjct: 183 LKVDNTWQVLEAGANAIVAGSAVFNAPDYAAAIAGIRNSKR 223
>gi|307150066|ref|YP_003885450.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7822]
gi|306980294|gb|ADN12175.1| ribulose-phosphate 3-epimerase [Cyanothece sp. PCC 7822]
Length = 235
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 142/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ SI + PSIL+ADFSRLGEEI I KAGA +H DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 7 SKSIVVAPSILSADFSRLGEEIQAIDKAGADWVHVDVMDGRFVPNITIGPLIVEAIRPYT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I GK+ GV +NP
Sbjct: 67 KKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIRECGKQAGVVLNP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ +E V++ D++LIM+VNPGFGGQ I +PKI++ + + +R + +EVDGG
Sbjct: 127 STPLDFIEYVLELCDLVLIMSVNPGFGGQSFIPEVVPKIQKLRQMCDERGLDPWIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F Y+K + ++ S
Sbjct: 187 LKPDNTWQVLEAGANAIVAGSAVFKASD---YSKAIEGIRHS 225
>gi|295706325|ref|YP_003599400.1| ribulose-phosphate 3-epimerase [Bacillus megaterium DSM 319]
gi|294803984|gb|ADF41050.1| ribulose-phosphate 3-epimerase [Bacillus megaterium DSM 319]
Length = 218
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 138/211 (65%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+FS+L EEI + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 3 KIAPSILSANFSKLAEEIREVEAGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D ++ + A AG DI+T H E+ H+ R+++ I G K GVA+NP TP+ +
Sbjct: 63 DVHLMIENPDQYVPMFAKAGADILTVHAEACTHLHRTIQLIKEHGMKAGVALNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
++ ++++ID+IL+MTVNPGFGGQ I + +PKI Q LI R +S+ EVDGG+
Sbjct: 123 VKHILEDIDLILLMTVNPGFGGQNFIPNVLPKIEQISQLIEIRHLSIEVEVDGGINEETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQ+ ++
Sbjct: 183 RKCVEAGANVLVAGSAIYNQEDRAGAISQIR 213
>gi|319649615|ref|ZP_08003771.1| ribulose-phosphate 3-epimerase [Bacillus sp. 2_A_57_CT2]
gi|317398777|gb|EFV79459.1| ribulose-phosphate 3-epimerase [Bacillus sp. 2_A_57_CT2]
Length = 216
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGEEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSADFSKLGEEIKDVERGGADYIHVDVMDGHFVPNITIGPLIVDAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A+AG D IT H E+ H+ R++ I + G K GV +NP TPV
Sbjct: 62 LDVHLMIENPDNYIEAFANAGADYITVHAEACKHLHRTIHFIKSFGVKAGVVLNPATPVN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++E +ID+IDM+L+MTVNPGFGGQ+ I +PKI+ K + + +I +EVDGGV
Sbjct: 122 MIEHIIDDIDMVLLMTVNPGFGGQKFIPGVLPKIKAVKEMADAKGLNIEIEVDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA++LV GS+ +NQK L
Sbjct: 182 AQLCIEAGANVLVAGSAIYNQKDRAVAIAALK 213
>gi|294500977|ref|YP_003564677.1| ribulose-phosphate 3-epimerase [Bacillus megaterium QM B1551]
gi|294350914|gb|ADE71243.1| ribulose-phosphate 3-epimerase [Bacillus megaterium QM B1551]
Length = 218
Score = 291 bits (745), Expect = 6e-77, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 138/211 (65%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+FS+L EEI + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 3 KIAPSILSANFSKLAEEIREVEAGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D ++ + A AG DI+T H E+ H+ R+++ I G K GVA+NP TP+ +
Sbjct: 63 DVHLMIENPDQYVPMFAKAGADILTVHAEACTHLHRTIQLIKEHGMKAGVALNPATPIDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
++ ++++ID+IL+MTVNPGFGGQ I S +PKI Q LI R +S+ EVDGG+
Sbjct: 123 VKHILEDIDLILLMTVNPGFGGQNFIPSVLPKIEQISQLIEIRHLSIEVEVDGGINEETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+AGA++LV GS+ +NQ+ ++
Sbjct: 183 RKCVEAGANVLVAGSAIYNQEDRAGAISQIR 213
>gi|92118133|ref|YP_577862.1| ribulose-phosphate 3-epimerase [Nitrobacter hamburgensis X14]
gi|91801027|gb|ABE63402.1| ribulose-5-phosphate 3-epimerase [Nitrobacter hamburgensis X14]
Length = 233
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 104/215 (48%), Positives = 145/215 (67%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + + GA IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 8 RPLVIAPSILASDFSKLGEEVRAVDQGGADWIHLDVMDGHFVPNISYGPDVIKAMRPHTK 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMIS D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP
Sbjct: 68 KIFDAHLMISPCDPYLEAFAKAGCDHITVHVEAGPHLHRSLQAIRALGKKAGVSLNPATP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
++ +E V+D +D++L+M+VNPGFGGQ+ I S + KIR +A+ R I +EVDGGV
Sbjct: 128 LSTIEYVLDMVDLVLVMSVNPGFGGQKFITSALDKIRDLRAMTAGRPIDIEVDGGVAPDV 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AGA+ V GS+ F SY ++ ++
Sbjct: 188 AGELGAAGANAFVAGSAVFKGGTMESYKANMDAIR 222
>gi|159029148|emb|CAO87508.1| rpe [Microcystis aeruginosa PCC 7806]
Length = 235
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 142/221 (64%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ SI + PSIL+ADFS+LG +I + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 7 SKSIVVSPSILSADFSKLGADIEAVDKAGADWIHVDVMDGRFVPNITIGPLIVSAIRPYT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 67 KKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLCQIRELGKQAGVVLNP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V+ D++LIM+VNPGFGGQ I +PKIRQ + + ++ + +EVDGG
Sbjct: 127 STPLDLIEYVLHLCDLVLIMSVNPGFGGQSFIPEVVPKIRQLRQICDEKGLDPWIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ N +++AGA+ +V GS+ FN + + + + K+
Sbjct: 187 LKPANTWQVLEAGANAIVAGSAVFNAPDYAAAIEGIRNSKR 227
>gi|41057048|ref|NP_957651.1| ribulose-phosphate 3-epimerase [Bacillus methanolicus]
gi|40074233|gb|AAR39397.1| putative ribulose-5-phosphate 3-epimerase [Bacillus methanolicus
MGA3]
Length = 214
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 145/213 (68%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+A+F+RL EEI ++ + GA IH DVMDG FVPNI+ G ++ ++R ++
Sbjct: 2 IKIAPSILSANFARLEEEIKDVERGGADYIHVDVMDGHFVPNITIGPLIVEAIRPVTNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ H+ R+++ I + G K GV +NP TPV+
Sbjct: 62 LDVHLMIENPDQYIGTFAKAGADILSVHVEACTHLHRTIQYIKSEGIKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E VI+++D++L+MTVNPGFGGQ I S +PKI+Q ++ ++++ +EVDGGV
Sbjct: 122 MIEHVIEDVDLVLLMTVNPGFGGQSFIHSVLPKIKQVANIVKEKNLQVEIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K V+AGA++LV GS+ +NQ+ ++ +
Sbjct: 182 AKLCVEAGANVLVAGSAIYNQEDRSQAIAKIRN 214
>gi|117926923|ref|YP_867540.1| ribulose-5-phosphate 3-epimerase [Magnetococcus sp. MC-1]
gi|117610679|gb|ABK46134.1| ribulose-5-phosphate 3-epimerase [Magnetococcus sp. MC-1]
Length = 224
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 102/213 (47%), Positives = 142/213 (66%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RLGEEI + AGA IH DVMDG FVPN++ G V+ S+R +
Sbjct: 2 IKIAPSILSADFARLGEEIRMVEAAGADYIHVDVMDGHFVPNLTMGPPVVASIRKVATKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMIS +D +I A AG DIIT H E++ H+ R+L I GKK GV+INP TPV+
Sbjct: 62 LDVHLMISPVDPYIEAFAQAGSDIITVHAEATHHLDRTLNLIKEYGKKAGVSINPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+E+V+ +DM+L+M+VNPGFGGQ I ++ K+RQ + +I + R I L+VDGGV N
Sbjct: 122 AIENVMHLVDMVLVMSVNPGFGGQSFIPHSLNKVRQVREMINRQDRPIELQVDGGVKPDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS+ F+Q + ++
Sbjct: 182 IAKIAEAGANVFVAGSAIFSQPDYRAVMDSMHK 214
>gi|227822070|ref|YP_002826041.1| Rpe; ribulose-phosphate 3-epimerase [Sinorhizobium fredii NGR234]
gi|227341070|gb|ACP25288.1| Rpe; ribulose-phosphate 3-epimerase [Sinorhizobium fredii NGR234]
Length = 224
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 116/220 (52%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAA+FS+LG+E+ ++ AGA IH DVMDG FVPNI+FG DVI+SLRSY
Sbjct: 1 MTHPIRIAPSILAANFSKLGQEVRDVVDAGADWIHLDVMDGHFVPNITFGPDVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMI+ DS + A AGCDI+T H E+ PH+ RSL+T+ A+GKK GV++NP
Sbjct: 61 TDATFDCHLMIAPADSFLEAFAKAGCDILTVHAEAGPHLHRSLQTVKALGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP + LE V+D +D+IL+MTVNPGFGGQ+ I KIR+ KA++G R I +EVDGG+
Sbjct: 121 TPESALEYVLDSLDLILVMTVNPGFGGQKFISVMEEKIRRIKAMVGDRPIEIEVDGGIAP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F +Y + ++ A
Sbjct: 181 ETAGVVTGAGANVLVAGSAIFKGGSVEAYRAAIEAIRTPA 220
>gi|322418096|ref|YP_004197319.1| ribulose-phosphate 3-epimerase [Geobacter sp. M18]
gi|320124483|gb|ADW12043.1| ribulose-phosphate 3-epimerase [Geobacter sp. M18]
Length = 221
Score = 290 bits (744), Expect = 7e-77, Method: Composition-based stats.
Identities = 105/217 (48%), Positives = 146/217 (67%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEEI I AGA +H DVMDG FVPNI+ G ++ + R +
Sbjct: 3 KIAPSILSADFARLGEEIRAIEAAGADYVHIDVMDGQFVPNITIGPLIVEAARRVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ D +I A AG DII H E++ H+ R+++ I ++GKK GV++NP TP++
Sbjct: 63 DVHLMIADPDRYIPDFAKAGSDIIVVHAEATNHLHRTIQLIRSLGKKAGVSLNPATPLSA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++E+D+IL+MTVNPGFGGQ IE+ IPKI+ +A + +R + LEVDGGV NI
Sbjct: 123 LDYVMEELDLILLMTVNPGFGGQSFIEACIPKIQALRATMDRRGVEAELEVDGGVKIDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ FN YA + +LK+ A
Sbjct: 183 ARIAHAGADVFVAGSAVFNSPD---YAATIAELKRRA 216
>gi|288958368|ref|YP_003448709.1| ribulose-phosphate 3-epimerase [Azospirillum sp. B510]
gi|288910676|dbj|BAI72165.1| ribulose-phosphate 3-epimerase [Azospirillum sp. B510]
Length = 217
Score = 290 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 105/218 (48%), Positives = 152/218 (69%), Gaps = 3/218 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSIL+ADF+RLGEE+ + AGA IH DVMDG FVPN++ G V+++LR +S
Sbjct: 1 MRAVKISPSILSADFARLGEEVRAVDAAGADYIHIDVMDGHFVPNLTIGPGVVKALRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFD HLMIS +D + A AG DIIT HPE+ PH+ R+++ I ++GKK GV++NP T
Sbjct: 61 AKVFDVHLMISPVDLFVPDFAKAGADIITVHPEAGPHLHRTIQLIKSLGKKAGVSLNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
PV ++ V++++D++L+MTVNPGFGGQ I+S +PKIR+ +A I + I LEVDGG+
Sbjct: 121 PVDAIQHVLEDVDLVLVMTVNPGFGGQSFIKSQLPKIRELRARIDAIGKPIDLEVDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ ++AGAD+LV G++ F G YA + L+
Sbjct: 181 PETARLAIEAGADVLVAGTATFTG-GPDQYAANIKALR 217
>gi|118591568|ref|ZP_01548965.1| Pentose-5-phosphate-3-epimerase [Stappia aggregata IAM 12614]
gi|118435896|gb|EAV42540.1| Pentose-5-phosphate-3-epimerase [Stappia aggregata IAM 12614]
Length = 233
Score = 290 bits (744), Expect = 8e-77, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 146/225 (64%), Gaps = 5/225 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT PSI+I PSIL+ADF+ G EI I + G +H DVMDG FVPN++FG + +++R
Sbjct: 1 MTFEPSIRIAPSILSADFADFGAEIRAIEQQGCDWVHVDVMDGHFVPNLTFGPQLCKAIR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ +V D HLMI+ +D +I A+AG DIIT H E+ PH R+L+ I A GKK G+A+N
Sbjct: 61 PHITTVMDVHLMIAPVDPYIEAFAEAGADIITAHLEAGPHPHRTLQAIRATGKKAGLALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TPV + ++D D+IL+MTVNPGFGGQ+ I++ + +IR+ KALIG R I +EVDGG+
Sbjct: 121 PGTPVEAADPLLDLCDLILVMTVNPGFGGQKFIQTQVDQIRRLKALIGDRPILIEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKKSA 220
+ AGA +LV GS+ F Y + L+++A
Sbjct: 181 DPATAPLVADAGARVLVAGSAVFRGGSVQVPSVYGDNIRTLREAA 225
>gi|302389597|ref|YP_003825418.1| ribulose-5-phosphate 3-epimerase [Thermosediminibacter oceani DSM
16646]
gi|302200225|gb|ADL07795.1| ribulose-5-phosphate 3-epimerase [Thermosediminibacter oceani DSM
16646]
Length = 218
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRL +E+ + AGA +H DVMDG FVPNI+ G VI SLR F
Sbjct: 3 KIAPSILSADFSRLQDEVKKVEDAGADLLHIDVMDGHFVPNITIGPPVISSLRRRCSLPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +++ AG DI+T H ES+ HI R +++I G VA+NP TP+ +
Sbjct: 63 DVHLMIENPERYVDDFIKAGADILTVHVESTVHINRLVQSIRDKGVLPAVALNPGTPLNV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ +++++ M+L+MTVNPGFGGQ I+ + KI++ K+LI R++ ++VDGG+ N
Sbjct: 123 LDYILEDVYMVLLMTVNPGFGGQSFIKGMLRKIKELKSLIESRNLDVLIQVDGGINENNA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++ AGAD+LV GS+ +N S ++L +L
Sbjct: 183 REVISAGADILVAGSAVYNSPDPASVIRKLKNL 215
>gi|239831733|ref|ZP_04680062.1| ribulose-phosphate 3-epimerase [Ochrobactrum intermedium LMG 3301]
gi|239824000|gb|EEQ95568.1| ribulose-phosphate 3-epimerase [Ochrobactrum intermedium LMG 3301]
Length = 225
Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats.
Identities = 105/214 (49%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPNI+FG V++++R
Sbjct: 1 MRP-IAIAPSILSADFARLGEEVDAVLEAGADWVHIDVMDGHFVPNITFGPQVVKAIRPR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+++ FD HLMI+ D ++ ADAGCD+IT H E+ PH RSL++I A+GKK G+A+NP
Sbjct: 60 TEAFFDAHLMIAPCDPYLAPFADAGCDLITIHAEAGPHTHRSLQSIRALGKKAGLALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP L +VI+++D++L+MTVNPGFGGQ+ I + KI++ + ++G R I +EVDGG+T
Sbjct: 120 TPAEALANVIEDVDLVLVMTVNPGFGGQKFIAPMLDKIKRVREMVGDRPIDIEVDGGITP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V AGA++LV GS+ + SY +
Sbjct: 180 ETAGSVVAAGANILVAGSAVYKGNSVESYRANIQ 213
>gi|134299572|ref|YP_001113068.1| ribulose-phosphate 3-epimerase [Desulfotomaculum reducens MI-1]
gi|134052272|gb|ABO50243.1| ribulose-5-phosphate 3-epimerase [Desulfotomaculum reducens MI-1]
Length = 218
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 147/220 (66%), Gaps = 5/220 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ L + + + +AGA+ +H DVMDG FVPNI+ G ++++LR S+ V
Sbjct: 2 IKIAPSILSADFANLAQSVQVVEQAGAEYLHIDVMDGHFVPNITIGPLIVKALRPNSNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ D+++ AG D++ H E+ PH+ RSL I +G K GVA+NP TP+
Sbjct: 62 FDVHLMINNPDAYVPEFIKAGADLVCVHAEACPHLHRSLSQIKELGAKVGVALNPHTPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D++L+MTVNPGFGGQ+ I +PKI+ +I +R + +E+DGG+ +
Sbjct: 122 VIEYVLPMLDLVLLMTVNPGFGGQKFIPEVLPKIKMLSNMIQERGLATEIEIDGGINTET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ QAGA++LV GS+ F A+ + D++KSA A
Sbjct: 182 APLVAQAGANVLVAGSAIFGATNP---AQAVADIRKSAGA 218
>gi|149182350|ref|ZP_01860828.1| ribulose-phosphate 3-epimerase [Bacillus sp. SG-1]
gi|148849969|gb|EDL64141.1| ribulose-phosphate 3-epimerase [Bacillus sp. SG-1]
Length = 218
Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 141/216 (65%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +EI ++ GA IH DVMDG FVPNI+ G +++++R +D
Sbjct: 2 VKIAPSILSADFANLAKEIKDVESGGADYIHVDVMDGHFVPNITLGPMIVKAVRPITDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A+AG D IT H E++PH+ R+++ I + G K G +NP TPV
Sbjct: 62 LDVHLMIENPDQYIEAFAEAGSDYITVHAEATPHLHRTIQLIKSRGIKAGAVLNPGTPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ VI+++DM+L+MTVNPGFGGQ I+S +PKIR+ L + S+ +EVDGG+T+
Sbjct: 122 MIKHVIEDLDMVLLMTVNPGFGGQSFIQSVVPKIREVHELAQQFNPSMEIEVDGGITAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K AGA + V GS+ +N++ + + +
Sbjct: 182 AKVCADAGATVFVAGSAIYNKEDREQAISAIREAAE 217
>gi|119493918|ref|ZP_01624481.1| ribulose-phosphate 3-epimerase [Lyngbya sp. PCC 8106]
gi|119452358|gb|EAW33551.1| ribulose-phosphate 3-epimerase [Lyngbya sp. PCC 8106]
Length = 233
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/226 (42%), Positives = 142/226 (62%), Gaps = 10/226 (4%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
MT S + I PSIL+ADFSRLG+E+ + +AGA IH DVMDG FVPNI+ G ++ +L
Sbjct: 1 MTQSKKQTVISPSILSADFSRLGDEVRAVDEAGADWIHVDVMDGRFVPNITIGPLIVEAL 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGV 115
R + D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV
Sbjct: 61 RPVTRKPLDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLGQIKELGKQAGV 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LE 173
+NP TP+ ++E +D D++LIM+VNPGFGGQ I + KI++ + + +R + +E
Sbjct: 121 VLNPGTPLELIEYSLDLCDLVLIMSVNPGFGGQSFIPGVVSKIQKLRQMCDQRGLDPWIE 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
VDGG+ N +++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 181 VDGGLKVNNTWQVLEAGANAIVAGSAVFKASD---YAEAIAGIRNS 223
>gi|149185151|ref|ZP_01863468.1| Ribulose-phosphate 3-epimerase [Erythrobacter sp. SD-21]
gi|148831262|gb|EDL49696.1| Ribulose-phosphate 3-epimerase [Erythrobacter sp. SD-21]
Length = 220
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 147/219 (67%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG +VPNI+ G V+++LR +
Sbjct: 1 MTVPL-ISPSILSADFARLGEEVRAVDEAGADWIHIDVMDGHYVPNITIGPAVVKALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMI +D ++ A+AG DIIT HPE+ PHI R+L+ I +GK+ GV +NP
Sbjct: 60 TKKPFDVHLMIEPVDPYLEAFAEAGADIITVHPEAGPHIHRTLQAIKNLGKQAGVVLNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +I+E+D++L+M+VNPGFGGQ I S + KI + +I + + I LEVDGGV
Sbjct: 120 TPAKMLDYLIEEVDLVLVMSVNPGFGGQSFIHSQLRKIEAIRKMIDQCGKDIRLEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V+AGAD+LV GS+ F G YA + LK
Sbjct: 180 DPTTAPLCVEAGADVLVAGSATFRG-GPEKYASNIAALK 217
>gi|229541133|ref|ZP_04430193.1| ribulose-phosphate 3-epimerase [Bacillus coagulans 36D1]
gi|229325553|gb|EEN91228.1| ribulose-phosphate 3-epimerase [Bacillus coagulans 36D1]
Length = 216
Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F++LGEEI ++ + GA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 2 VKIAPSILSANFAKLGEEIKDVEEGGADWIHIDVMDGHFVPNITMGPLVVGAVRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D ++ A AG D I+ H E+ H+ R+++ I ++G GV +NP TPV
Sbjct: 62 LDVHLMIENPDQYLEAFAKAGADTISVHVEACRHLHRTIQEIRSLGVNPGVVLNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ ++ ++ ++L+MTVNPGFGGQ IES +PKI + L ++ + +EVDGG+
Sbjct: 122 WIAPILGDVGLVLLMTVNPGFGGQAFIESVVPKIEKLHRLKKEQGLAFDIEVDGGIHPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ QAGA +LV GS+ F K + L
Sbjct: 182 AQKCTQAGATVLVAGSNIFKSKNRKKAIQALK 213
>gi|166368910|ref|YP_001661183.1| ribulose-phosphate 3-epimerase [Microcystis aeruginosa NIES-843]
gi|166091283|dbj|BAG05991.1| pentose-5-phosphate-3-epimerase [Microcystis aeruginosa NIES-843]
Length = 235
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 141/221 (63%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ SI + PSIL+ADFS+LG +I + KAGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 7 SKSIVVSPSILSADFSKLGADIEAVDKAGADWIHVDVMDGRFVPNITIGPLIVSAIRPYT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 67 KKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLCQIRELGKQAGVVLNP 126
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V+ D++LIM+VNPGFGGQ I +PKI Q + + +R + +EVDGG
Sbjct: 127 STPLDLIEYVLHLCDLVLIMSVNPGFGGQSFIPEVVPKILQLRQMCDERGLDPWIEVDGG 186
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ N +++AGA+ +V GS+ FN + + + + K+
Sbjct: 187 LKPANTWQVLEAGANAIVAGSAVFNAPDYATAIEGIRNSKR 227
>gi|317969819|ref|ZP_07971209.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CB0205]
Length = 222
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ I PSIL+ADFSRLGE++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKSLVISPSILSADFSRLGEDVRAVDEAGADWIHVDVMDGRFVPNITIGPMIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ H+ R+L I +GK G +NP T
Sbjct: 63 KKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACTHLHRNLAQIKDLGKMAGAVLNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IES + KIR + + ++ + +EVDGG+
Sbjct: 123 PIDTLEYCLELCDLVLIMSVNPGFGGQSFIESQVQKIRDLRRMCDEKGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ SYA + ++ S
Sbjct: 183 AENAWKVIEAGANAIVSGSGVFNQP---SYADAMTGIRNS 219
>gi|300864874|ref|ZP_07109721.1| ribulose-phosphate 3-epimerase [Oscillatoria sp. PCC 6506]
gi|300337116|emb|CBN54871.1| ribulose-phosphate 3-epimerase [Oscillatoria sp. PCC 6506]
Length = 233
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 97/225 (43%), Positives = 143/225 (63%), Gaps = 7/225 (3%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
MT S + I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G ++ ++
Sbjct: 1 MTQSRKSTVISPSILSADFSRLGDEIRAVDLAGADWIHVDVMDGRFVPNITIGPLIVEAI 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGV 115
R + D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV
Sbjct: 61 RPVTSKPLDVHLMIVEPEKYVEDFAKAGADIISVHAEHNASPHLHRTLGQIRELGKQAGV 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LE 173
+NP TP+ ++E V++ D+ILIM+VNPGFGGQ I + +PKIR+ + + +R + +E
Sbjct: 121 VLNPSTPLELIEHVLELCDLILIMSVNPGFGGQSFIPTVVPKIRKLRQMCDERGLDPWIE 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
VDGG+ N +++AGA+ +V GS+ F K + + + K+
Sbjct: 181 VDGGLKVDNTWQVLEAGANAIVAGSAVFKAKDYAAAIEGIRHSKR 225
>gi|86604814|ref|YP_473577.1| ribulose-phosphate 3-epimerase [Synechococcus sp. JA-3-3Ab]
gi|86553356|gb|ABC98314.1| ribulose-phosphate 3-epimerase [Synechococcus sp. JA-3-3Ab]
Length = 236
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 143/223 (64%), Gaps = 4/223 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I + PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 11 KPIVVAPSILSADFSRLGEEVRAVDEAGADWIHVDVMDGRFVPNITIGPLVVEALRPVTA 70
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A AG DII+ H E S+ H+ R+L I +GK+ GV +NP
Sbjct: 71 KPLDVHLMIVEPEKYVADFAKAGADIISVHAESSSTIHLHRTLGQIKDLGKQAGVVLNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
+P+ +++ V+D +D++LIM+VNPGFGGQ I + +PKIRQ +AL +R + +EVDGG+
Sbjct: 131 SPLELIQYVLDLVDLVLIMSVNPGFGGQSFIPAVVPKIRQLRALCDERGLDPWIEVDGGI 190
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ N +++AGA+ +V GS+ F K + + ++ L
Sbjct: 191 KASNAWQVIEAGANAIVAGSAVFKAKDYGEAIRAIRHSRRPEL 233
>gi|251797733|ref|YP_003012464.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. JDR-2]
gi|247545359|gb|ACT02378.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. JDR-2]
Length = 214
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+RLG+EI +AGA IH DVMDG FVPN++FG VI ++R + F
Sbjct: 3 IIAPSILSADFARLGDEIKAAEEAGADWIHVDVMDGHFVPNLTFGPPVIAAVRPATKLPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + I A AG D IT H E++ H+ R+++ I +G GVA+NP TP+++
Sbjct: 63 DVHLMIERPELSIPSYAAAGADRITVHAEATVHLHRTIQQIKDLGLPAGVALNPGTPLSV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---SLEVDGGVTSRN 182
LE ++ ++D+ILIMTVNPGFGGQ IE ++ K+RQ + ++ +R + ++VDGG+ S
Sbjct: 123 LEHILGDVDLILIMTVNPGFGGQAFIEESLNKLRQLRKMLNERGLGHVHVQVDGGINSVT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K +V+AGA++LV G++ F ++ + L
Sbjct: 183 AKQVVEAGANVLVAGNAVFGERDRAAAIAALR 214
>gi|288553109|ref|YP_003425044.1| ribulose-phosphate 3-epimerase [Bacillus pseudofirmus OF4]
gi|288544269|gb|ADC48152.1| ribulose-phosphate 3-epimerase [Bacillus pseudofirmus OF4]
Length = 215
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+A+F+ LGE+I + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSANFATLGEDIKEVEAGGADYIHVDVMDGHFVPNITIGPLIVDAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A +G DIIT H E+ PH+ R++ I G K GV +NP TP
Sbjct: 62 LDVHLMIENPDQYIPQFAKSGADIITVHVEACPHLHRTIHLIKENGCKAGVVLNPHTPFD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++++DMIL MTVNPGFGGQ I S +PKI++A + I ++ + +EVDGGV
Sbjct: 122 AVKPIVEDLDMILFMTVNPGFGGQSFISSVLPKIKEASSYIKEKGLDVEIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K V+AGA++LV GS+ +N++ +
Sbjct: 182 AKQCVEAGANVLVAGSAIYNKEDRAKAIADIR 213
>gi|218671602|ref|ZP_03521272.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli GR56]
Length = 225
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 124/220 (56%), Positives = 163/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMIS +D ++ A AGCD IT H ES PH+ RSL+T+ +GKK GV +NP
Sbjct: 61 TDATFDCHLMISPVDDYLEAFAKAGCDRITVHAESGPHLHRSLQTVRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAAKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F Y + + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGDTVEDYRRTVTDLRQAA 220
>gi|197119889|ref|YP_002140316.1| ribulose-phosphate 3-epimerase [Geobacter bemidjiensis Bem]
gi|253702183|ref|YP_003023372.1| ribulose-phosphate 3-epimerase [Geobacter sp. M21]
gi|197089249|gb|ACH40520.1| ribulose-phosphate 3-epimerase [Geobacter bemidjiensis Bem]
gi|251777033|gb|ACT19614.1| ribulose-phosphate 3-epimerase [Geobacter sp. M21]
Length = 221
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 105/217 (48%), Positives = 145/217 (66%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEEI I GA +H DVMDG FVPNI+ G ++ + R +
Sbjct: 3 KIAPSILSADFARLGEEIKAIEAGGADYVHIDVMDGQFVPNITIGPLIVEAARRVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E++ H+ R+++ I ++GKK GV++NP TP+ +
Sbjct: 63 DVHLMIDNPDRYIPDFAKAGSDIIVVHAEATNHLHRTVQLIKSLGKKAGVSLNPATPLNL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++++D+IL+MTVNPGFGGQ IE+ IPKI+ +A + +R I LEVDGGV NI
Sbjct: 123 LDYVMEDLDLILLMTVNPGFGGQSFIEACIPKIQALRATMDRRGIEAELEVDGGVKIDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ FN YA + +LKK A
Sbjct: 183 ARISHAGADVFVAGSAVFNSPD---YAATIAELKKKA 216
>gi|295399769|ref|ZP_06809750.1| ribulose-phosphate 3-epimerase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978172|gb|EFG53769.1| ribulose-phosphate 3-epimerase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 216
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 142/212 (66%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F++L EEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSANFAQLAEEIRDVERGGADYIHVDVMDGHFVPNITIGPLIVEAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I + A AG D ++ H E+ PH+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPVFAKAGADYLSVHVEACPHLHRTVHLIKEHGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ +ID+ID++L+MTVNPGFGGQ+ I S +PKIRQ L+ ++ + +EVDGG+ +
Sbjct: 122 MIQHMIDDIDLVLLMTVNPGFGGQKFIPSVLPKIRQVAQLVKEKGRFVEIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA++LV GS+ +N++ + + +
Sbjct: 182 ARFCIEAGANVLVAGSAIYNERDRAAAIRAIR 213
>gi|33862842|ref|NP_894402.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9313]
gi|33634758|emb|CAE20744.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9313]
Length = 227
Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats.
Identities = 92/220 (41%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADFSRLGE++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVIAPSILSADFSRLGEDVQAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG D I E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 SKPLDVHLMIVEPERYVGDFAKAGADHIYVQVEACPHLHRNLAQIKDLGKKAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ I++ + KIR+ + + ++ + +EVDGG+
Sbjct: 123 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRELRRICDEQGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ YA+ + ++ S
Sbjct: 183 ADNAWKVIEAGANAIVSGSGVFNQPD---YAEAIRGIRNS 219
>gi|67921815|ref|ZP_00515332.1| Ribulose-phosphate 3-epimerase [Crocosphaera watsonii WH 8501]
gi|67856407|gb|EAM51649.1| Ribulose-phosphate 3-epimerase [Crocosphaera watsonii WH 8501]
Length = 233
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 95/222 (42%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S I PSIL+ADFSRLG EI + +AGA IH DVMDG FVPNI+ G ++ ++R Y+
Sbjct: 5 TKSTVISPSILSADFSRLGAEIKAVDQAGADWIHVDVMDGRFVPNITIGPLIVDAIRPYT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 65 QKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLGQIRELGKQAGVVLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++E V++ D++LIM+VNPGFGGQ I + KIR+ + + ++ + +EVDGG
Sbjct: 125 STPLDLIEYVLELCDLVLIMSVNPGFGGQSFIPEMVSKIRKLRQMCDEKGLDPWIEVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS+ F YA+ + ++ S
Sbjct: 185 LKPNNTWQVLEAGANAIVAGSAVFKA---ADYAEAIEGIRNS 223
>gi|205373326|ref|ZP_03226130.1| ribulose-phosphate 3-epimerase [Bacillus coahuilensis m4-4]
Length = 216
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+L +EI + GA IH DVMDG FVPNI+ G +++++R ++
Sbjct: 1 MKIAPSILSADFSQLKKEIQEVENGGADYIHIDVMDGHFVPNITIGPLIVKAVRPHTSLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I+ AG DIIT H E+ PHI R+++ I G K GV +NP TP++
Sbjct: 61 LDVHLMIEKPELYIDEFVSAGADIITVHIEACPHIHRTIQQIKGHGIKAGVVLNPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ ++++IDM+LIMTVNPGFGGQQ IE I KIR+ + I R + +EVDGG+
Sbjct: 121 SIQHILEDIDMVLIMTVNPGFGGQQFIEGMIEKIRELRNTINARGLDIEIEVDGGINEDT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I+S + AGAD+ V GS+ +N + + RL K
Sbjct: 181 IQSCLHAGADVFVAGSAVYNHQDRKAAITRLKQAVK 216
>gi|327190557|gb|EGE57651.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli
CNPAF512]
Length = 225
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 125/220 (56%), Positives = 164/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMIS +D ++ A AGCD IT H ES PH+ RSL+T+ +GKK GV +NP
Sbjct: 61 TDATFDCHLMISPVDDYLEAFAKAGCDRITVHAESGPHLHRSLQTVRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAAKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F +Y K + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGGTVENYRKTVADLRQAA 220
>gi|85709898|ref|ZP_01040963.1| ribulose-phosphate 3-epimerase [Erythrobacter sp. NAP1]
gi|85688608|gb|EAQ28612.1| ribulose-phosphate 3-epimerase [Erythrobacter sp. NAP1]
Length = 220
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 113/213 (53%), Positives = 151/213 (70%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE+ + AGA IH DVMDG FVPN++ G DV+++LR +SD FD
Sbjct: 6 ISPSILSADFARLGEEVRAVDAAGADWIHIDVMDGHFVPNLTIGPDVVKALRPHSDKTFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS +D ++ A+AG DIIT HPE+ PHI R+L+ I ++GKK G INP TPV +L
Sbjct: 66 VHLMISPVDPYLEAFAEAGADIITVHPEAGPHIHRTLQAIRSLGKKAGAVINPGTPVEVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
++++D +D+IL+M+VNPGFGGQ I S + K+R+ +A+I K R I LEVDGGV +
Sbjct: 126 DNIMDMVDLILVMSVNPGFGGQSFIHSQLEKVRRIRAMIEKTGREIHLEVDGGVNPDTAR 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V+AGAD+LV GS+ F G YA + LK
Sbjct: 186 LCVEAGADVLVAGSATFKG-GPDHYAANIAALK 217
>gi|312112801|ref|YP_004010397.1| ribulose-phosphate 3-epimerase [Rhodomicrobium vannielii ATCC
17100]
gi|311217930|gb|ADP69298.1| ribulose-phosphate 3-epimerase [Rhodomicrobium vannielii ATCC
17100]
Length = 221
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 106/221 (47%), Positives = 149/221 (67%), Gaps = 3/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+R GEE+ I +AGA +H DVMDG FVPNI+FG ++ +R +
Sbjct: 1 MSSLPLIAPSILSADFARFGEEVRAIDEAGADWVHVDVMDGHFVPNITFGPRLVECIRPW 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + D HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I ++GKK GV++NP
Sbjct: 61 TKKLLDVHLMIAPADPYLEAFAKAGSDIITVHAEAGPHLDRSLQVIRSLGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +++E V+D+ID++L+M+VNPGFGGQ + S + K+R+ A+I R I+LEVDGGVT
Sbjct: 121 TPESVIEYVLDKIDLVLVMSVNPGFGGQAFLPSQVEKVRRIAAMIQGRPIALEVDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
LVQAGA LV GS+ F YAK + ++ + L
Sbjct: 181 ETAPLLVQAGATALVAGSAVFKGG---EYAKNIAAIRDACL 218
>gi|83310478|ref|YP_420742.1| Pentose-5-phosphate-3-epimerase [Magnetospirillum magneticum AMB-1]
gi|82945319|dbj|BAE50183.1| Pentose-5-phosphate-3-epimerase [Magnetospirillum magneticum AMB-1]
Length = 230
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 106/215 (49%), Positives = 152/215 (70%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+ADF+RLGEE+ I +AG +H DVMDG FVPN++FG +I+++R Y+
Sbjct: 19 TVKIAPSILSADFARLGEEVKAIDEAGCDWVHIDVMDGHFVPNLTFGPAIIKAIRPYTTK 78
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI +I A AG DII H E+ H+ RSL+ I ++GKK GV++NP TP
Sbjct: 79 VFDVHLMIDPAQPYIEDYAKAGADIIVVHAEADKHLDRSLQLIRSLGKKAGVSLNPSTPE 138
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++++ V+D++D++L+M+VNPGFGGQ IE+ + KI + KA+IG R I LEVDGGVT+ N
Sbjct: 139 SVIQYVMDKLDLVLVMSVNPGFGGQSFIEAQLDKIARIKAMIGTRPIDLEVDGGVTADNA 198
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+V AGA++LV GS+ F K YA + L++
Sbjct: 199 HRVVAAGANVLVAGSAVFKTKD---YAANIAALRR 230
>gi|209549512|ref|YP_002281429.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535268|gb|ACI55203.1| Ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 225
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 124/220 (56%), Positives = 163/220 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLRSY
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS +D ++ A AGCD IT H E+ PH+ RSL+TI +GKK GV +NP
Sbjct: 61 TSATFDCHLMISPVDDYLEAFAKAGCDRITVHAEAGPHLHRSLQTIRNLGKKVGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAAKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ ++ +AG ++LV GS+ F Y + + DL+++A
Sbjct: 181 ETVSAITRAGGNVLVAGSAIFKGATVEDYRRTIADLRQAA 220
>gi|116252344|ref|YP_768182.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv. viciae
3841]
gi|115256992|emb|CAK08086.1| putative ribulose-phosphate 3-epimerase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 225
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 124/220 (56%), Positives = 161/220 (73%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ ++T AGA IH DVMDG FVPNISFG DVI+SLRSY
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRDVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS +D ++ A AGCD IT H E+ PH+ RSL+TI +GKK GV INP
Sbjct: 61 TSATFDCHLMISPVDDYLEAFAKAGCDRITVHAEAGPHLHRSLQTIRNLGKKVGVTINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I LEVDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAKKIAAAKSLIGDRPIELEVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG ++LV GS+ F Y + + DL+++A
Sbjct: 181 ETAPDIARAGGNVLVAGSAIFKGDTVEDYRRTVADLRQAA 220
>gi|241204845|ref|YP_002975941.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858735|gb|ACS56402.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 225
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 123/220 (55%), Positives = 162/220 (73%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ ++T AGA IH DVMDG FVPNISFG DVI+SLRSY
Sbjct: 1 MTLPIRIAPSILAADFARLGEEVRDVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRSY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMIS +D ++ A AGCD IT H E+ PH+ RSL+TI +GKK GV INP
Sbjct: 61 TSATFDCHLMISPVDDYLEAFAKAGCDRITVHAEAGPHLHRSLQTIRNLGKKVGVTINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++ +E+V+D++D+ILIM+VNPGFGGQ+ I + KI AK+LIG R I L+VDGGVT
Sbjct: 121 TPLSAIENVLDDVDLILIMSVNPGFGGQKFIPAMAKKIAAAKSLIGDRPIELQVDGGVTV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +AG ++LV GS+ F Y + + DL+++A
Sbjct: 181 ETAPAIARAGGNVLVAGSAIFKGDTVEDYRRTVADLRQAA 220
>gi|87124325|ref|ZP_01080174.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RS9917]
gi|86167897|gb|EAQ69155.1| ribulose-phosphate 3-epimerase [Synechococcus sp. RS9917]
Length = 227
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 136/219 (62%), Gaps = 2/219 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFARLGEEVKAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK+ G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLAQIKDLGKQAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ I++ + KIR + + + + +EVDGGV
Sbjct: 123 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRDLRRMCEAKGLDPWIEVDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +++AGA+ +V GS FNQ + + + + K+
Sbjct: 183 GANAWKVIEAGANAIVSGSGVFNQPDYAAAIEGIRNSKR 221
>gi|110678440|ref|YP_681447.1| ribulose-5-phosphate 3-epimerase [Roseobacter denitrificans OCh
114]
gi|109454556|gb|ABG30761.1| ribulose-5-phosphate 3-epimerase [Roseobacter denitrificans OCh
114]
Length = 230
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 140/224 (62%), Gaps = 3/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S +I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 4 NRSFKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPSTCAAIRPHI 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLMI+ +D +I+ A AG D+IT H E+ PHI R+++ I A G K GVA+NP T
Sbjct: 64 KTVMDVHLMIAPVDPYIDAFAKAGADVITAHVEAGPHIHRTMQAIRAAGAKAGVALNPGT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P + +E ++D +D++ +MTVNPGFGGQ+ I S + K+RQ +A+IG R I +E+DGGV
Sbjct: 124 PASSVEYLLDMVDLVCVMTVNPGFGGQKFIHSQVEKVRQLRAMIGDRPIHIEIDGGVDPT 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALA 222
+ AGAD+LV GS+ F Y + ++ + L+
Sbjct: 184 TAPLVAAAGADVLVAGSAVFRGGSVSNPAPYGANIKAIRDAVLS 227
>gi|83945788|ref|ZP_00958131.1| ribulose-phosphate 3-epimerase [Oceanicaulis alexandrii HTCC2633]
gi|83850791|gb|EAP88653.1| ribulose-phosphate 3-epimerase [Oceanicaulis alexandrii HTCC2633]
Length = 220
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 147/219 (67%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PSIL+ADF+RLG+E+ I AGA IH DVMDG FVPN++ G V+++LR +
Sbjct: 1 MARSTIISPSILSADFARLGDEVKAIDAAGADWIHIDVMDGHFVPNLTIGPAVVKALRPW 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD FD HLMIS +D+++ A+AG D+IT HPE+ PH R+++TI + G K G A+NP
Sbjct: 61 SDQPFDVHLMISPVDAYVADFAEAGADMITAHPEAGPHFHRTVQTIKSHGVKAGAALNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
+ + +++ V+DE+D++LIM+VNPGFGGQ + S + KI + I +R + +EVDGGV
Sbjct: 121 SSLDMIDYVLDELDLVLIMSVNPGFGGQSFLTSQLRKIETLRKTIERRGLDTMIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + + AGAD LV GS+ F G +YA + L+
Sbjct: 181 NPQTAQHCINAGADALVAGSAVFKG-GPGAYAGNIAALR 218
>gi|307296991|ref|ZP_07576807.1| ribulose-phosphate 3-epimerase [Sphingobium chlorophenolicum L-1]
gi|306877517|gb|EFN08745.1| ribulose-phosphate 3-epimerase [Sphingobium chlorophenolicum L-1]
Length = 220
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 150/219 (68%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+RLGEE+ I +AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTSPILISPSILSADFARLGEEVRAIDEAGADWIHIDVMDGHFVPNITIGPGVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D ++N A+AG DI+T HPE+ PHI RS++ I ++G + GV +NP
Sbjct: 61 TKKPFDVHLMISPVDQYLNAFAEAGADILTVHPEAGPHIHRSIQHIKSLGVQAGVVLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +ID++D+IL+M+VNPGFGGQ I + + KI + +I K R I L+VDGG+
Sbjct: 121 TPAKMLDYLIDDVDLILVMSVNPGFGGQSFITNQLRKIEAIRKMIEKSGRDIRLQVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++AGAD+LV G++ F G +YA + L+
Sbjct: 181 DFTTAPLAIEAGADVLVAGTATFRG-GASAYAGNIRTLR 218
>gi|157692259|ref|YP_001486721.1| ribulose-phosphate 3-epimerase [Bacillus pumilus SAFR-032]
gi|157681017|gb|ABV62161.1| ribulose-phosphate 3-epimerase [Bacillus pumilus SAFR-032]
Length = 216
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 140/214 (65%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ L ++I ++ + GA IH DVMDG FVPN++FG +V+ ++R ++
Sbjct: 2 VYIAPSILSADFANLEKDIRDVEQGGADYIHIDVMDGHFVPNMTFGPNVVEAIRPHTRLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DII+ H E+ PH+ R+++ I G K GV +NP TPV+
Sbjct: 62 LDVHLMIEQPDRYIPAFAKAGADIISVHVEACPHLHRTIQHIKEQGVKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+E V++++D++L MTVNPGFGGQ I S + K+++ KAL ++ ++ +E+DGGV
Sbjct: 122 HIEHVLEDVDLVLFMTVNPGFGGQAFIPSVLKKVKEVKALSEQKGLTDLLIEIDGGVNVE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
KS +AGA+LLV GS+ + + + + +
Sbjct: 182 TAKSCKEAGANLLVAGSAVYGEDNRAVAIQAIRE 215
>gi|254431669|ref|ZP_05045372.1| ribulose-phosphate 3-epimerase [Cyanobium sp. PCC 7001]
gi|197626122|gb|EDY38681.1| ribulose-phosphate 3-epimerase [Cyanobium sp. PCC 7001]
Length = 270
Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 140/220 (63%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ + PSIL+ADFSRLG+++ + AGA IH DVMDG FVPNI+ G ++++LR +
Sbjct: 46 TKSLVVSPSILSADFSRLGDDVRAVDAAGADWIHVDVMDGRFVPNITIGPLIVQALRPVT 105
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 106 TKPLDVHLMIVEPEKYVADFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPST 165
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++L+M+VNPGFGGQ IES + KIR + + + + +EVDGG+
Sbjct: 166 PIDTLEYCLELCDLVLVMSVNPGFGGQSFIESQVDKIRDLRRMCDAKGLDPWIEVDGGIK 225
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N +++AGA+ +V GS FNQ SYA+ + +++S
Sbjct: 226 AENAWKVIEAGANAIVSGSGVFNQP---SYAEAITGIRQS 262
>gi|23098966|ref|NP_692432.1| ribulose-phosphate 3-epimerase [Oceanobacillus iheyensis HTE831]
gi|22777194|dbj|BAC13467.1| ribulose-phosphate 3-epimerase [Oceanobacillus iheyensis HTE831]
Length = 218
Score = 288 bits (739), Expect = 3e-76, Method: Composition-based stats.
Identities = 99/215 (46%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF++LG+EI + +AGA IH DVMDG FVPNI+ G V+ ++R +D
Sbjct: 3 KIAPSILSADFAKLGQEIKEVEEAGADYIHVDVMDGHFVPNITIGPLVVEAIRPITDLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D++I A+AG IIT H E+ H+ R+L+ I + G K GV INP TPV +
Sbjct: 63 DVHLMIENPDAYIPAFAEAGASIITVHQEACVHLHRTLQLIRSHGVKPGVVINPATPVEM 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ ++ E+D+ILIMTVNPGFGGQ I+ T KI+Q K S +EVDGGV +
Sbjct: 123 IKPILAEVDLILIMTVNPGFGGQSFIQETTSKIKQLADWREKYKLSYEIEVDGGVNEKTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+GAD+LV GS+ FN + + L + K
Sbjct: 183 GICTTSGADVLVAGSAIFNHENRKQAIELLREKAK 217
>gi|254448929|ref|ZP_05062384.1| ribulose-phosphate 3-epimerase [gamma proteobacterium HTCC5015]
gi|198261466|gb|EDY85756.1| ribulose-phosphate 3-epimerase [gamma proteobacterium HTCC5015]
Length = 224
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 105/227 (46%), Positives = 149/227 (65%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKQPYKIAPSILSADLARLGEDVDRVLAAGADIVHFDVMDNHYVPNLTFGPSVCQALRDY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G ++G+ NP
Sbjct: 61 GITAPIDAHLMVKPVDDLIPAFAKAGADFITFHPEASEHIDRSLQLIKDSGCQSGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++DMIL+M+VNPG+GGQ I T+ K+R+A+ALI + R I LE+DGG
Sbjct: 121 ATPLDYLKHVLDKVDMILLMSVNPGYGGQSFIPGTLDKLREARALIDESGRDIRLEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V + NI+ + +AGAD V GS+ FN SY + + ++K +D
Sbjct: 181 VKTDNIREIAEAGADTFVAGSAIFNAP---SYEEAIAQMRKELAGVD 224
>gi|94498063|ref|ZP_01304626.1| Ribulose-phosphate 3-epimerase [Sphingomonas sp. SKA58]
gi|94422498|gb|EAT07536.1| Ribulose-phosphate 3-epimerase [Sphingomonas sp. SKA58]
Length = 220
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 105/219 (47%), Positives = 148/219 (67%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+RLGEE+ I +AG +H DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTHPILISPSILSADFARLGEEVRAIDEAGCDWLHIDVMDGHFVPNITIGPAVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMIS +D +++ AG DIIT HPE+ PHI R+++ I ++G K GV +NP
Sbjct: 61 SQKPFDVHLMISPVDPYLDAFVQAGADIITVHPEAGPHIHRTVQHIKSLGVKAGVVLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +ID++D+IL+M+VNPGFGGQ IE+ + KI + +I K R I L+VDGG+
Sbjct: 121 TPAKMLDYLIDDVDLILVMSVNPGFGGQSFIENQLRKIEAIRKMIDKSGRDIRLQVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+LV G++ F G+ +YA + L+
Sbjct: 181 DLNTAPRAIAAGADVLVAGTATFRG-GQSAYADNIRQLR 218
>gi|299821755|ref|ZP_07053643.1| ribulose-phosphate 3-epimerase [Listeria grayi DSM 20601]
gi|299817420|gb|EFI84656.1| ribulose-phosphate 3-epimerase [Listeria grayi DSM 20601]
Length = 218
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L ++I + + GA +H DVMDG FVPNI+FG ++ ++R +
Sbjct: 3 KIAPSILSADFANLAKDIKEVEELGADYLHVDVMDGHFVPNITFGPLMVEAIRPITKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D++I A AG D I+ H E++ H+ RSL+ I + K +NP TP+
Sbjct: 63 DVHLMIEDPDAYIPAFAKAGADFISVHVEATRHLHRSLQLIRSYDVKAAAVLNPATPIDT 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V+ E+DM+L MTVNPGFGGQ I + KI+ K LI ++ I +EVDGGV +
Sbjct: 123 LQHVLHELDMVLFMTVNPGFGGQVFIPEVLEKIKAFKQLITEKGLDIKIEVDGGVNEKTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGAD+ V GS + K + L +
Sbjct: 183 RLCKEAGADIFVAGSYVYGSKDRSIPIETLRN 214
>gi|194014352|ref|ZP_03052969.1| ribulose-phosphate 3-epimerase [Bacillus pumilus ATCC 7061]
gi|194013378|gb|EDW22943.1| ribulose-phosphate 3-epimerase [Bacillus pumilus ATCC 7061]
Length = 216
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 142/214 (66%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ L ++I ++ + GA IH DVMDG FVPN++FG +V+ ++R ++
Sbjct: 2 VYIAPSILSADFANLEKDIRDVEQGGADYIHIDVMDGHFVPNMTFGPNVVEAIRPHTRLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DII+ H E+ PH+ R+++ + G K GV +NP TPV+
Sbjct: 62 LDVHLMIEQPDRYIPAFAKAGADIISVHVEACPHLHRTIQHMKEQGVKAGVVLNPHTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+E +++++D++L MTVNPGFGGQ I S + K+++ KAL ++ ++ +E+DGGV
Sbjct: 122 HIEHILEDVDLVLFMTVNPGFGGQAFIPSVLTKVKEVKALSEQKGLTDLLIEIDGGVNVE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
KS +AGA+LLV GS+ + ++ + + + +
Sbjct: 182 TAKSCKEAGANLLVAGSAVYGKENRAAAIQAIRE 215
>gi|294010237|ref|YP_003543697.1| ribulose-phosphate 3-epimerase [Sphingobium japonicum UT26S]
gi|292673567|dbj|BAI95085.1| ribulose-phosphate 3-epimerase [Sphingobium japonicum UT26S]
Length = 220
Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 150/219 (68%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+RLGEE+ I +AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTSPILISPSILSADFARLGEEVRAIDEAGADWIHIDVMDGHFVPNITIGPGVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D ++N A+AG DI+T HPE+ PHI RS++ I ++G + GV +NP
Sbjct: 61 TKKPFDVHLMISPVDQYLNAFAEAGADILTVHPEAGPHIHRSIQHIKSLGVQAGVVLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +ID++D+IL+M+VNPGFGGQ I + + KI + +I K R I L+VDGG+
Sbjct: 121 TPAKMLDYLIDDVDLILVMSVNPGFGGQSFIANQLRKIEAIRKMIEKSGRDIRLQVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++AGAD+LV G++ F G +YA + L+
Sbjct: 181 DFTTAPLAIEAGADVLVAGTATFRG-GASAYADNIRTLR 218
>gi|323489541|ref|ZP_08094768.1| ribulose-phosphate 3-epimerase [Planococcus donghaensis MPA1U2]
gi|323396672|gb|EGA89491.1| ribulose-phosphate 3-epimerase [Planococcus donghaensis MPA1U2]
Length = 221
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 145/220 (65%), Gaps = 2/220 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSILAADF++LGEE+ + KAGA IH DVMDG FVPNISFGA V+ ++R +
Sbjct: 2 IKIAPSILAADFAKLGEEVVEVEKAGADWIHVDVMDGHFVPNISFGAIVLNAIRPLTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I AG D IT H E+ PH+ R+++ I + G K GV +NP TP+
Sbjct: 62 MDVHLMIENPDLYIEEFGKAGADYITVHVEACPHLHRTIQLIRSFGVKPGVVLNPHTPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ ++++ID++L MTVNPGFGGQ+ I S +PK++Q +I ++ SI +E+DGG+
Sbjct: 122 TIQHILEDIDLVLFMTVNPGFGGQKFIHSVVPKVKQLSDIIKEKELSIEIEIDGGINEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I + +AGA + V GS+ +++K + + + A++
Sbjct: 182 IVACAEAGATVFVAGSAIYSKKDRAEALQAIRKAGEEAIS 221
>gi|312111721|ref|YP_003990037.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y4.1MC1]
gi|311216822|gb|ADP75426.1| ribulose-phosphate 3-epimerase [Geobacillus sp. Y4.1MC1]
Length = 216
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 141/212 (66%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F++L EEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSANFAQLAEEIRDVERGGADYIHVDVMDGHFVPNITIGPLIVEAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I + A AG D ++ H E+ PH+ R++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPVFAKAGADYLSVHVEACPHLHRTVHLIKEHGVKAGVVLNPHTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ +ID+ID++L+MTVNPGFGGQ+ I S +PKIRQ L+ ++ + +EVDGG+ +
Sbjct: 122 MIQHMIDDIDLVLLMTVNPGFGGQKFIPSVLPKIRQVAQLVKEKGRFVEIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA +LV GS+ +N++ + + +
Sbjct: 182 ARFCIEAGATVLVAGSAIYNERDRAAAIRAIR 213
>gi|85375337|ref|YP_459399.1| pentose-5-phosphate-3-epimerase [Erythrobacter litoralis HTCC2594]
gi|84788420|gb|ABC64602.1| pentose-5-phosphate-3-epimerase [Erythrobacter litoralis HTCC2594]
Length = 221
Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats.
Identities = 112/219 (51%), Positives = 150/219 (68%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ +I AGA IH DVMDG +VPNI+ G V+++LR +
Sbjct: 1 MVPPL-ISPSILSADFARLGEEVRSIDAAGADWIHVDVMDGHYVPNITIGPAVVKALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D FD HLMI+ ID ++ A+AG DIIT HPE+ PHI R+L+ I A+ KK GV +NP
Sbjct: 60 TDKPFDVHLMIAPIDPYLEAFAEAGADIITVHPEAGPHIHRTLQAIRALDKKAGVVLNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV +L++++D D++L+M+VNPGFGGQ I+S + KI + + I R I LEVDGGV
Sbjct: 120 TPVEVLDNLMDLADLVLVMSVNPGFGGQSFIDSQLGKIEKIRKRIDATGRDIHLEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ V AGAD+LV GS+ F GE YA + LK
Sbjct: 180 NPDTARQCVDAGADVLVAGSATFKG-GEERYAANIRALK 217
>gi|113953634|ref|YP_730887.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9311]
gi|113880985|gb|ABI45943.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9311]
Length = 223
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 140/221 (63%), Gaps = 3/221 (1%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ S+ + PSIL+ADFSRLGE++ + +AGA IH DVMDG FVPNI+ G ++ +LR
Sbjct: 1 MSRQSLVVSPSILSADFSRLGEDVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRP 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLMI ++++ A AG DII+ E+ PH+ R+L I +GK G +NP
Sbjct: 61 VTKKPLDVHLMIVQPENYVEDFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ LE ++ D++LIM+VNPGFGGQ I++ + KIR + + ++ + +EVDGG
Sbjct: 121 STPLDTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRDLRRMCDEKGLDPWIEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V + N +++AGA+ +V GS FNQ + + + + K+
Sbjct: 181 VKAANAWKVIEAGANAIVSGSGVFNQPDYAAAIQGIRNSKR 221
>gi|161526027|ref|YP_001581039.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans ATCC
17616]
gi|189349256|ref|YP_001944884.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans ATCC
17616]
gi|221201752|ref|ZP_03574790.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD2M]
gi|221207173|ref|ZP_03580183.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD2]
gi|221213302|ref|ZP_03586277.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD1]
gi|160343456|gb|ABX16542.1| Ribulose-phosphate 3-epimerase [Burkholderia multivorans ATCC
17616]
gi|189333278|dbj|BAG42348.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans ATCC
17616]
gi|221166754|gb|EED99225.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD1]
gi|221172761|gb|EEE05198.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD2]
gi|221178568|gb|EEE10977.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans CGD2M]
Length = 228
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 101/230 (43%), Positives = 143/230 (62%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLTLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDYVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y K +++++ + A++
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRKVIDEMRAALAAVE 226
>gi|15603484|ref|NP_246558.1| ribulose-phosphate 3-epimerase [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12722019|gb|AAK03703.1| Dod [Pasteurella multocida subsp. multocida str. Pm70]
Length = 238
Score = 287 bits (736), Expect = 7e-76, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 146/227 (64%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+AD +RLGE++ + GA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 15 MMKPYLIAPSILSADLARLGEDVEQVLTCGADVIHFDVMDNHYVPNLTFGPAICQALRHY 74
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPE++ HI RSL+ I G K+G+ NP
Sbjct: 75 GITAPIDVHLMVKPVDRLIPDFAKAGANYITFHPEATEHIDRSLQLIRDCGCKSGLVFNP 134
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+R+A+ I + + EVDGG
Sbjct: 135 ATPLSYLDYVMDKVDVILLMSVNPGFGGQSFIPSTLDKLREARQRIDESGFDIRLEVDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + +AGAD+ V GS+ F+Q Y K ++++++ ++
Sbjct: 195 VKVSNIADIARAGADMFVAGSAIFDQPD---YQKVIDEMRQQLATVE 238
>gi|15240250|ref|NP_200949.1| RPE; catalytic/ ribulose-phosphate 3-epimerase [Arabidopsis
thaliana]
gi|30697525|ref|NP_851240.1| RPE; catalytic/ ribulose-phosphate 3-epimerase [Arabidopsis
thaliana]
gi|4102703|gb|AAD09954.1| ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|9757862|dbj|BAB08496.1| ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|15027997|gb|AAK76529.1| putative ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|20259209|gb|AAM14320.1| putative ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|332010080|gb|AED97463.1| D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
gi|332010081|gb|AED97464.1| D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana]
Length = 281
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 93/227 (40%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 55 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 114
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 115 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNP 174
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 175 GTPLSAIEYVLDMVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGG 234
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK-SALAI 223
VT N +++AGA+ LV GS+ F K K + K+ +A+A+
Sbjct: 235 VTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPAAVAV 281
>gi|256821377|ref|YP_003145340.1| ribulose-phosphate 3-epimerase [Kangiella koreensis DSM 16069]
gi|256794916|gb|ACV25572.1| ribulose-phosphate 3-epimerase [Kangiella koreensis DSM 16069]
Length = 225
Score = 287 bits (735), Expect = 7e-76, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 144/219 (65%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I I PSIL+ADF+RLGEE+ N+ KAGA +HFDVMD +VPN++ G V +LR++ +
Sbjct: 4 IVIAPSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYVPNLTIGPMVCEALRNHGIKA 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG ITFHPE+S H+ R++ I G K G+ +NP TP+
Sbjct: 64 PIDVHLMVEPVDRIIPDFAKAGASYITFHPEASKHVDRTIGLIKEQGCKAGIVLNPATPL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
++L+ VI+++DM+L+M+VNPGFGGQ I T+ K +Q + LI +R + + E+DGGV
Sbjct: 124 SVLDYVIEKLDMVLLMSVNPGFGGQSFIPHTLQKCQQVRRLIDERGLDIRLEIDGGVKVD 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI+ + GAD V GS+ FN Y K ++ +K++A
Sbjct: 184 NIEEIAACGADTFVAGSAVFNADD---YGKVIHTMKENA 219
>gi|148554857|ref|YP_001262439.1| ribulose-5-phosphate 3-epimerase [Sphingomonas wittichii RW1]
gi|148500047|gb|ABQ68301.1| ribulose-5-phosphate 3-epimerase [Sphingomonas wittichii RW1]
Length = 220
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 104/221 (47%), Positives = 150/221 (67%), Gaps = 3/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF++LGEE+ I AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTSPVLISPSILSADFAKLGEEVRAIDAAGADWIHVDVMDGHFVPNITIGPAVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D+ + A+AG DIIT HPE+ PH+ R+++ I +GKK GV++NP
Sbjct: 61 TTKPFDVHLMISPVDAFLEDFANAGADIITVHPEAGPHVHRTIQRIKGLGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +++++D++L+M+VNPGFGGQ IES + KI + +I K + I LEVDGGV
Sbjct: 121 TPAKMLDYILEDVDLVLVMSVNPGFGGQSFIESQLRKIEAIRKMIDKSGKDIHLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ ++ AGA LV G++ F G YA + L+K+
Sbjct: 181 DANTAPRVIAAGATALVAGTATFRG-GPSQYAANIAGLRKA 220
>gi|150376074|ref|YP_001312670.1| ribulose-phosphate 3-epimerase [Sinorhizobium medicae WSM419]
gi|150030621|gb|ABR62737.1| Ribulose-phosphate 3-epimerase [Sinorhizobium medicae WSM419]
Length = 228
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 109/220 (49%), Positives = 153/220 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+FG VI++LR
Sbjct: 1 MNETTIIAPSVLSADFSRLGEEVEAVCRAGADWIHLDVMDGHFVPNITFGPPVIKALRDR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFDCHLMI+ ++ A AGCDIIT H E++ H+ R+L+ I +G K GV++NP
Sbjct: 61 TDKVFDCHLMIAPPTPYLGAFACAGCDIITVHAEATTHLDRTLQAIRDVGCKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +++E V+D +D++L+MTVNPGFGGQ I + I K+R+ K+LIG R I +E+DGGVT
Sbjct: 121 TPESVIEYVLDRLDLVLLMTVNPGFGGQDFIPAVIEKVRRVKSLIGNRPIHIEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV GS+ F E YA+ + ++ ++
Sbjct: 181 ETAPLVAAAGADVLVAGSAVFKGGSEEHYARNITAIRAAS 220
>gi|113869265|ref|YP_727754.1| ribulose-phosphate 3-epimerase [Ralstonia eutropha H16]
gi|113528041|emb|CAJ94386.1| Ribulose-phosphate 3-epimerase [Ralstonia eutropha H16]
Length = 233
Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 141/223 (63%), Gaps = 7/223 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP+ +I PSIL+ADF+RLGEE+ +T+AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 TPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHV 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG +IITFHPE+S H+ RSL I G + G+ NP T
Sbjct: 63 TAPIDVHLMVRPVDRIIPDFAKAGANIITFHPEASEHVDRSLALIRDHGCQAGLVFNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ V+D +D+IL+M+VNPGFGGQ I T+ K+R + I + R+I LEVD
Sbjct: 123 PLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDEYTARTGRTILLEVD 182
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLK 217
GGV NI + AGAD V GS+ F + + Y ++ L+
Sbjct: 183 GGVKVDNIAEIAAAGADTFVAGSAVFGKPDADGGYRGIISALR 225
>gi|318041352|ref|ZP_07973308.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CB0101]
Length = 227
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 92/224 (41%), Positives = 138/224 (61%), Gaps = 5/224 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + I PSIL+ADFSRLG+++ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKPLVISPSILSADFSRLGDDVRAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ H+ R+L I +GK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVADFAKAGADIISVQVEACTHLHRNLAQIKDLGKMAGAVLNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++L+M+VNPGFGGQ IE+ + KIR + + +R + +EVDGG+
Sbjct: 123 PIDTLEYCLELCDLVLVMSVNPGFGGQSFIENQVQKIRDLRRMCDERGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ N +++AGA+ +V GS FNQ SYA + ++ S +
Sbjct: 183 AENAWKVIEAGANAIVSGSGVFNQP---SYADAITGIRNSKRPV 223
>gi|257469504|ref|ZP_05633596.1| ribulose-phosphate 3-epimerase [Fusobacterium ulcerans ATCC 49185]
gi|317063748|ref|ZP_07928233.1| ribulose-phosphate 3-epimerase [Fusobacterium ulcerans ATCC 49185]
gi|313689424|gb|EFS26259.1| ribulose-phosphate 3-epimerase [Fusobacterium ulcerans ATCC 49185]
Length = 213
Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats.
Identities = 108/218 (49%), Positives = 152/218 (69%), Gaps = 6/218 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL+ADFSRLGEE++ I KAGA +H DVMDG FVPNI+FGA VI+++R+
Sbjct: 1 MNNDIKIAPSILSADFSRLGEEVTAIDKAGADYVHIDVMDGMFVPNITFGAPVIKAIRNK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ VFD HLMI + +I+ AG DIIT H ES+ H+ R ++ I A G K GV++NP
Sbjct: 61 TKLVFDVHLMIEKPERYIDDFVKAGADIITVHAESTVHLHRVIQQIKAHGIKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +L+ VI++IDM+LIM+VNPGFGGQ+ I S + KI+ + L + + ++VDGG+T+
Sbjct: 121 TPVDVLKYVINDIDMVLIMSVNPGFGGQKFINSALDKIKDVRVL--SKDVDIQVDGGITA 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I ++AGA++ V GS F+ Y +R+N LK+
Sbjct: 179 DTIGKCIEAGANIFVAGSYVFSG----DYEERINSLKR 212
>gi|86160387|ref|YP_467172.1| ribulose-5-phosphate 3-epimerase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776898|gb|ABC83735.1| ribulose-5-phosphate 3-epimerase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 224
Score = 287 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 92/222 (41%), Positives = 138/222 (62%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL+ADF RL EE+ + AGA IH DVMDG FVPNI+ G V+ ++R
Sbjct: 1 MALPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + ++ A AG D+++ H E SPH+ R+L+ I A G + VA+NP
Sbjct: 61 TRLPVDAHLMIVEPEKYVEAFAKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
T ++ +E V+ + +M+L+MTVNPGFGGQ+ IE+ K+R+ +A+ R + +EVDGGV
Sbjct: 121 TDLSAIEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRRLRAMADARGLALEIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV G++ F Y + ++ L+ +A
Sbjct: 181 KPETAGKVAAAGANVLVAGTAVFGAPD---YRQAISSLRAAA 219
>gi|94312107|ref|YP_585317.1| ribulose-phosphate 3-epimerase [Cupriavidus metallidurans CH34]
gi|93355959|gb|ABF10048.1| D-ribulose-5-phosphate 3-epimerase [Cupriavidus metallidurans CH34]
Length = 266
Score = 287 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 101/229 (44%), Positives = 139/229 (60%), Gaps = 7/229 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+P+ +I PSIL+ADF+RLGEE+ +T+AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 36 SPTFRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHV 95
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG +IITFHPE+S HI RSL I G + G+ NP T
Sbjct: 96 TAPIDVHLMVRPVDRIIPDFARAGANIITFHPEASDHIDRSLALIRDNGCQAGLVFNPAT 155
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ V+D +D+IL+M+VNPGFGGQ I T+ K+R + I R I LEVD
Sbjct: 156 PLHYLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDAYTARTGRRILLEVD 215
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSALAI 223
GGV NI + AGAD V GS+ F + + Y + L+ +
Sbjct: 216 GGVKVDNIAEIAAAGADTFVAGSAVFGKPDADGGYKGVIGALRAELATV 264
>gi|163732752|ref|ZP_02140197.1| ribulose-5-phosphate 3-epimerase [Roseobacter litoralis Och 149]
gi|161394112|gb|EDQ18436.1| ribulose-5-phosphate 3-epimerase [Roseobacter litoralis Och 149]
Length = 230
Score = 287 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 99/224 (44%), Positives = 142/224 (63%), Gaps = 3/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S++I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 4 NRSLKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPSTCAAIRPHI 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLMI+ +D +I+ A AG D+IT H E+ PHI R+++ I A G K GVA+NP T
Sbjct: 64 KTVMDVHLMIAPVDPYIDAFAKAGADVITAHVEAGPHIHRTMQAIRAAGAKAGVALNPGT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P + +E ++D +D++ +MTVNPGFGGQ+ I S + K+RQ +A+IG R I +E+DGGV
Sbjct: 124 PASSVEYLLDMVDLVCVMTVNPGFGGQKFIHSQVEKVRQLRAMIGDRPIHIEIDGGVDPA 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKKSALA 222
+V AGAD+LV GS+ F Y + ++ + L+
Sbjct: 184 TAPLVVAAGADVLVAGSAVFRGGSVSKPAPYGANIKAIRDAVLS 227
>gi|126739771|ref|ZP_01755462.1| ribulose-phosphate 3-epimerase [Roseobacter sp. SK209-2-6]
gi|126719003|gb|EBA15714.1| ribulose-phosphate 3-epimerase [Roseobacter sp. SK209-2-6]
Length = 229
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 145/221 (65%), Gaps = 4/221 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RQIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPMAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMIS +DS+I+ ADAG D++T H E+ PHI R+L+ I A G K GVA+NP TP
Sbjct: 65 TVMDVHLMISPVDSYIDAYADAGADVLTAHIEAGPHIHRTLQAIRAAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQ+ I+ T KIRQ + +IG R + +E+DGGV +
Sbjct: 125 AEAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-SKIRQLRQMIGDRPVHIEIDGGVDPKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ F + Y K + +++ +A
Sbjct: 184 APLVAEAGADVLVAGSAVFRGGSVENPDVYGKNIKEIRDAA 224
>gi|254246440|ref|ZP_04939761.1| Ribulose-phosphate 3-epimerase [Burkholderia cenocepacia PC184]
gi|124871216|gb|EAY62932.1| Ribulose-phosphate 3-epimerase [Burkholderia cenocepacia PC184]
Length = 228
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 101/230 (43%), Positives = 142/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y K +N+++ + ++
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRKVINEMRAALATVE 226
>gi|327441105|dbj|BAK17470.1| pentose-5-phosphate-3-epimerase [Solibacillus silvestris StLB046]
Length = 221
Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 147/221 (66%), Gaps = 5/221 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSILAADF++LG+E+ + AGA+ IH DVMDG FVPNISFGA + ++R S
Sbjct: 2 IKIAPSILAADFAKLGQEVKEVEAAGAELIHIDVMDGHFVPNISFGAIALEAIRPLSTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 62 MDVHLMIENPDQYIEQFAKAGADYITVHVEACRHLHRTIQLIRSHGVKPGVVLNPHTPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ +++++DM+L MTVNPGFGGQ+ IES +PK+ +I +R +I +E+DGG+ +
Sbjct: 122 TIQHILEDVDMVLFMTVNPGFGGQKFIESVVPKVEALSEIIKERGLNIEIEIDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I +AGA + V GS+ ++++ A+ L ++K++ LA
Sbjct: 182 IVPCAKAGATVFVAGSAIYSKEDR---AQALQEIKQAGLAA 219
>gi|310779112|ref|YP_003967445.1| ribulose-5-phosphate 3-epimerase [Ilyobacter polytropus DSM 2926]
gi|309748435|gb|ADO83097.1| ribulose-5-phosphate 3-epimerase [Ilyobacter polytropus DSM 2926]
Length = 209
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 154/214 (71%), Gaps = 6/214 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI++IT+AGA IH DVMDG FVPNISFG VI+S+R S+
Sbjct: 2 IKIAPSILSADFSKLGEEITSITEAGADMIHIDVMDGMFVPNISFGPVVIKSIRDKSNLC 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + +I+ AG D+IT H ES+ H+ R+++ I A G K V++NP T V
Sbjct: 62 FDVHLMIENPERYIDEFVKAGADLITVHAESTTHLHRTIQQIKAHGVKAAVSLNPATSVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ +IDE+DM+L+M+VNPGFGGQ+ I ST+ KI++ +++ +I ++VDGG+T + +K
Sbjct: 122 SLKYIIDELDMVLLMSVNPGFGGQKFIPSTLEKIKEVRSMNA--NIDIQVDGGITDKTVK 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++AGA++ V GS F+ +Y +R+ LKK
Sbjct: 180 GCIEAGANVFVAGSYVFSG----NYKERIESLKK 209
>gi|87198130|ref|YP_495387.1| ribulose-5-phosphate 3-epimerase [Novosphingobium aromaticivorans
DSM 12444]
gi|87133811|gb|ABD24553.1| ribulose-5-phosphate 3-epimerase [Novosphingobium aromaticivorans
DSM 12444]
Length = 219
Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats.
Identities = 116/219 (52%), Positives = 153/219 (69%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF+RLGEE+ I AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTP--LISPSILSADFARLGEEVRAIDAAGADWIHVDVMDGHFVPNITIGPMVVKALRPH 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D ++ ADAG DIIT HPE+ PHI R+++ I A+GKK GV++NP
Sbjct: 59 TTKPFDVHLMISPVDGYLQAFADAGADIITVHPEAGPHIHRTVQAIKALGKKAGVSLNPG 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +ID++D++L+M+VNPGFGGQ I S + KI + +I K R I LEVDGGV
Sbjct: 119 TPAKMLDYLIDDVDLVLVMSVNPGFGGQSFISSQLRKIEAVRKMIDKSGRDIHLEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+R I+S V AGAD+LV G++ F G YA + LK
Sbjct: 179 DTRTIRSCVDAGADVLVAGTATFKG-GPSQYAANIAALK 216
>gi|49475718|ref|YP_033759.1| Pentose (ribulose)-5-phosphate-3-epimerase [Bartonella henselae
str. Houston-1]
gi|49238525|emb|CAF27761.1| Pentose (ribulose)-5-phosphate-3-epimerase [Bartonella henselae
str. Houston-1]
Length = 224
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 105/220 (47%), Positives = 151/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS+LA++FS+LG+E+ ++ AGA IH D+MDG FVPNI+FG DV+++LR
Sbjct: 1 MPRSHLIAPSLLASNFSKLGQEVFDVIDAGADWIHLDIMDGHFVPNITFGPDVVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++FD HLMI+ D ++ A AG DIIT H E+ H+ RSL+ I +GKK G+AINP
Sbjct: 61 TKAIFDVHLMIAPADPYLEAFAKAGADIITIHAEAGLHLHRSLQKIKEIGKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+IL+MTVNPGFGGQ I KI++ K++I R I LEVDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILVMTVNPGFGGQNFIPEIKDKIKRIKSMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGA++ V GS+ + + Y R+N L+++A
Sbjct: 181 DTIGITAKAGANVFVAGSAIYKDGNKELYKTRINALRQAA 220
>gi|23013910|ref|ZP_00053758.1| COG0036: Pentose-5-phosphate-3-epimerase [Magnetospirillum
magnetotacticum MS-1]
Length = 213
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 105/215 (48%), Positives = 150/215 (69%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL+ADF+RLGEE+ I +AG +H DVMDG FVPN++FG +I+++R Y+
Sbjct: 2 TVKIAPSILSADFARLGEEVKAIDEAGCDWVHIDVMDGHFVPNLTFGPAIIKAIRPYTTK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI +I A AG DII H E+ H+ RSL+ I ++GKK GV++NP TP
Sbjct: 62 VFDVHLMIDPAQPYIEDYAKAGADIIVVHAEADKHLDRSLQLIRSLGKKAGVSLNPATPE 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+++E V+D++D++L+M+VNPGFGGQ IE+ + KI + K +IG R I LEVDGGVT+ N
Sbjct: 122 SVIEYVMDKLDLVLVMSVNPGFGGQSFIEAQLDKITRIKKMIGHRMIDLEVDGGVTADNA 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGA++LV GS+ F K YA + L++
Sbjct: 182 HRVAAAGANVLVAGSAVFKTKD---YAANIAALRR 213
>gi|2499728|sp|Q43843|RPE_SOLTU RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
AltName: Full=Pentose-5-phosphate 3-epimerase;
Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
Precursor
gi|902739|emb|CAA90426.1| pentose-5-phosphate-3-epimerase [Solanum tuberosum]
Length = 280
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 140/227 (61%), Gaps = 5/227 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+FS+LGE++ I +AG IH DVMDG FVPNI+ G V+ SLR +
Sbjct: 54 KSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT 113
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI D + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 114 DLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNP 173
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ +E V+D +D++LIM+VNPGFGGQ IES + KI + + +R ++ +EVDGG
Sbjct: 174 GTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGG 233
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK-SALAI 223
V +N +++AGA+ LV GS+ F K + K+ A+A+
Sbjct: 234 VGPKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKTSKRPEAVAV 280
>gi|296331154|ref|ZP_06873628.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674310|ref|YP_003865982.1| ribulose-5-phosphate 3-epimerase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151798|gb|EFG92673.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412554|gb|ADM37673.1| ribulose-5-phosphate 3-epimerase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 217
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LG EI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGVKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSR 181
++E V D++D++L+MTVNPGFGGQ+ I S +PKI++ K + +R + +EVDGGV
Sbjct: 122 VIEHVFDDLDLVLLMTVNPGFGGQKFIHSVLPKIKEVKRMADERGKKDLLIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++AGA+LLV GS+ + Q +
Sbjct: 182 TAPLVIEAGANLLVAGSAVYGQPDRKKAISEIR 214
>gi|149913651|ref|ZP_01902184.1| Pentose-5-phosphate-3-epimerase [Roseobacter sp. AzwK-3b]
gi|149812771|gb|EDM72600.1| Pentose-5-phosphate-3-epimerase [Roseobacter sp. AzwK-3b]
Length = 280
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 140/220 (63%), Gaps = 3/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
S++I PSIL+ADF+ G EI + GA IH DVMDG FVPN++FG + ++R +
Sbjct: 56 RSLKIAPSILSADFANFGAEIRAVEAEGADWIHVDVMDGHFVPNLTFGPPMCAAIRPHIK 115
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ A AG DI+T H E+ PH+ R+L+ I G K G+A+NP T
Sbjct: 116 TVMDVHLMIAPVDPYIDAFAAAGADILTAHLEAGPHVHRTLQAIRGAGCKAGLALNPGTG 175
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +E ++D +D+I +MTVNPGFGGQ+ I S I K+R+ + +IG R I +E+DGG+T
Sbjct: 176 IGDIEHLLDMVDLICVMTVNPGFGGQKFIHSQIEKVRRLRQMIGDRPIHIEIDGGITPET 235
Query: 183 IKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKS 219
+ QAGAD+LV GS+ F Y + +K +
Sbjct: 236 APLMTQAGADVLVAGSAVFKGGSVSNPAPYGDNIRAIKAA 275
>gi|332705968|ref|ZP_08426041.1| ribulose-5-phosphate 3-epimerase [Lyngbya majuscula 3L]
gi|332355228|gb|EGJ34695.1| ribulose-5-phosphate 3-epimerase [Lyngbya majuscula 3L]
Length = 235
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 142/221 (64%), Gaps = 7/221 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSIL+ADFSRLGEEI + AGA IH DVMDG FVPNI+ G V++++R +
Sbjct: 8 KQVVISPSILSADFSRLGEEIKAVDAAGADWIHVDVMDGRFVPNITIGPLVVKAIRPITQ 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A+AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 68 KPLDVHLMIVEPEKYVADFAEAGADIISVHAEHNASPHLHRTLCQIRELGKQAGVVLNPS 127
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
+ + ++E V++ D+ILIM+VNPGFGGQ I +PKIR+ + + +R + +EVDGG+
Sbjct: 128 SSLDLIEYVLEVCDLILIMSVNPGFGGQSFITEVVPKIRKLRQMCDERGLSPWIEVDGGL 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS+ F YA+ ++ ++ S
Sbjct: 188 KVNNTWQVLEAGANAIVAGSAVFKAPD---YAEAISGIRNS 225
>gi|114321981|ref|YP_743664.1| ribulose-5-phosphate 3-epimerase [Alkalilimnicola ehrlichii MLHE-1]
gi|114228375|gb|ABI58174.1| ribulose-5-phosphate 3-epimerase [Alkalilimnicola ehrlichii MLHE-1]
Length = 230
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 147/227 (64%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MT-DYKIAPSILSADFARLGEEVDNVLSAGADMVHFDVMDNHYVPNLTIGPLVCEALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLMI +D I A+AG + ITFHPE+S H+ RSL+ + G K G+ NP
Sbjct: 60 GVTAPIDVHLMIKPVDRIIPDFAEAGANYITFHPEASEHVDRSLQLVRDCGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V++++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LEVDGG
Sbjct: 120 ATPLDVLKYVMEKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI+++ +AGAD V GS+ F Y K + ++ +
Sbjct: 180 VKVDNIRAVAEAGADTFVAGSAIFGTDD---YRKTIESMRAELAQAE 223
>gi|308804970|ref|XP_003079797.1| GLUCOSE INHIBITED DIVISION PROTEIN A (ISS) [Ostreococcus tauri]
gi|116058254|emb|CAL53443.1| GLUCOSE INHIBITED DIVISION PROTEIN A (ISS) [Ostreococcus tauri]
Length = 920
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/205 (46%), Positives = 141/205 (68%), Gaps = 4/205 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
SI + PSIL+A+F++LGEEI I KAGA+ +H DVMDG FVPNI+ G V+ ++R +
Sbjct: 42 KKSIIVSPSILSANFAKLGEEIEAIDKAGAEWVHVDVMDGRFVPNITIGPLVVDAIRPVT 101
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D V DCHLMI + + A AG DII+ H E ++ H+ R++ I +G K GV +NP
Sbjct: 102 DKVLDCHLMIVEPELRVADFAKAGADIISVHAEGAATIHLHRTINQIKDLGCKAGVVLNP 161
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+++L+ +I+E+D+IL+M+VNPGFGGQ IES + KI + KA+ + ++ +EVDGG
Sbjct: 162 GTPISVLDYIIEEVDLILVMSVNPGFGGQSFIESQVEKIAKIKAMCDAKGVNPWIEVDGG 221
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN 202
V+ N +++AGA+ LV GS+ F
Sbjct: 222 VSPANAYKVIEAGANALVAGSAVFK 246
>gi|170076952|ref|YP_001733590.1| ribulose-phosphate 3-epimerase [Synechococcus sp. PCC 7002]
gi|169884621|gb|ACA98334.1| ribulose-phosphate 3-epimerase [Synechococcus sp. PCC 7002]
Length = 229
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 102/224 (45%), Positives = 143/224 (63%), Gaps = 5/224 (2%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT I + PSIL+ADFSRLGEEI + +AGA IH DVMDG FVPNI+ G ++ ++R
Sbjct: 1 MTDKKIVVSPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEAIRP 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAI 117
Y+ D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GKK+GV +
Sbjct: 61 YTKKPLDVHLMIVEPEKYVANFAKAGADIISVHAEHNASPHLHRTLCQIRELGKKSGVVL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
NP TP+ I+E V+D D+ILIM+VNPGFGGQ I S + KI + +A+ +R + +EVD
Sbjct: 121 NPSTPLDIIEHVLDVCDLILIMSVNPGFGGQSFIPSMVNKIEKLRAMCDERGLDPWIEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GG+ N ++ AGA+ +V GS+ F + + + KKS
Sbjct: 181 GGIKPANAWQVIDAGANAIVAGSAVFKAPSYAEAIEGIRNSKKS 224
>gi|170731861|ref|YP_001763808.1| ribulose-phosphate 3-epimerase [Burkholderia cenocepacia MC0-3]
gi|206558807|ref|YP_002229567.1| ribulose-phosphate 3-epimerase [Burkholderia cenocepacia J2315]
gi|169815103|gb|ACA89686.1| Ribulose-phosphate 3-epimerase [Burkholderia cenocepacia MC0-3]
gi|198034844|emb|CAR50712.1| putative ribulose-phosphate 3-epimerase [Burkholderia cenocepacia
J2315]
Length = 228
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 142/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y K +++++ + ++
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRKVIDEMRAALATVE 226
>gi|78221294|ref|YP_383041.1| ribulose-5-phosphate 3-epimerase [Geobacter metallireducens GS-15]
gi|78192549|gb|ABB30316.1| ribulose-5-phosphate 3-epimerase [Geobacter metallireducens GS-15]
Length = 221
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 104/217 (47%), Positives = 150/217 (69%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R ++
Sbjct: 3 KIAPSILSADFSRLGDEVRAVAAAGADYIHVDVMDGHFVPNITIGPPVVEAVRKVTELPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E+S H+ R+++ I ++GKK GV++NP TP+++
Sbjct: 63 DVHLMIENPDRYIPDFAKAGSDIIVVHAEASVHLHRTIQLIKSLGKKAGVSLNPATPLSV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE V+DE+D++L+MTVNPGFGGQ IE+ +PKI+ +A++ +R + LEVDGGV NI
Sbjct: 123 LEYVLDELDLVLLMTVNPGFGGQSFIEACLPKIQALRAMLDRRGCNAELEVDGGVKIDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++ V GS+ F K Y + + +LK+ A
Sbjct: 183 DRIAHAGANVFVAGSAVFGSKD---YKETIKELKRRA 216
>gi|134294625|ref|YP_001118360.1| ribulose-phosphate 3-epimerase [Burkholderia vietnamiensis G4]
gi|134137782|gb|ABO53525.1| ribulose-5-phosphate 3-epimerase [Burkholderia vietnamiensis G4]
Length = 228
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 142/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y K +++++ + ++
Sbjct: 180 DGGVKTDNIAEIAAAGADTFVAGSAIFGKPD---YRKVIDEMRAALATVE 226
>gi|311029979|ref|ZP_07708069.1| ribulose-phosphate 3-epimerase [Bacillus sp. m3-13]
Length = 217
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG++I ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFANLGKDILDVEQGGADYIHIDVMDGHFVPNITIGPLIVEAVRPITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I A AG DII+ H E+ H+ R+++ I + G K GV INP TPV
Sbjct: 62 LDVHLMIENPDAYIADFAKAGADIISVHVEACRHLHRTIQHIKSQGVKAGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+ +++++D++L+MTVNPGFGGQ I +PKI+Q +L +R I +EVDGGV
Sbjct: 122 SIIPILNDVDLVLLMTVNPGFGGQAFIHDVLPKIKQVASLAEERGLSIDIEVDGGVNPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K V AGA++LV GS+ +N++ +
Sbjct: 182 AKLCVDAGANVLVAGSAIYNKEDRKQAISSIRS 214
>gi|295696047|ref|YP_003589285.1| ribulose-phosphate 3-epimerase [Bacillus tusciae DSM 2912]
gi|295411649|gb|ADG06141.1| ribulose-phosphate 3-epimerase [Bacillus tusciae DSM 2912]
Length = 221
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 139/216 (64%), Gaps = 1/216 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PSIL+ADF+RL EE+ ++T+AGA IH DVMDG FVPNI+ G V+ SLR
Sbjct: 1 MRRSVMMAPSILSADFARLAEEVESVTRAGANWIHVDVMDGQFVPNITIGPPVVASLRRV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLMI++ D +I A AG D IT H E+ PH+ R++++I A G K GVA+NP
Sbjct: 61 TDLPLDVHLMIANPDRYIEDFARAGADRITVHVEACPHLHRTIQSIRATGAKPGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVT 179
TP ++ V+++++++L+MTVNPGFGGQ + T+ KI + G R + +EVDGG+
Sbjct: 121 TPPEMVRWVLEDVELVLVMTVNPGFGGQAFLPRTVEKIPLLREWAGDRDDLYVEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V+AGAD+LV GS+ F + + +
Sbjct: 181 PSTAPKAVKAGADVLVAGSAVFGRADRKKALGDILE 216
>gi|254303676|ref|ZP_04971034.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323868|gb|EDK89118.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 215
Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 143/220 (65%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTNGIKIAPSILSSDFSKLGEEVIAIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K G+++NP
Sbjct: 61 TKLVFDVHLMIDKPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGISLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKMRA--DIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ Y +R++ LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----DYKERIDLLKLKA 214
>gi|330961048|gb|EGH61308.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 224
Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 107/225 (47%), Positives = 145/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ SA A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRAELASARA 224
>gi|167587609|ref|ZP_02379997.1| ribulose-phosphate 3-epimerase [Burkholderia ubonensis Bu]
Length = 228
Score = 285 bits (731), Expect = 3e-75, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+ +A I R I LEV
Sbjct: 120 TPLNYLDYVMDRLDFVLLMSVNPGFGGQSFIPETLNKLRETRARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV + NI + AGAD V GS+ F + Y K +++++ +
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRKVIDEMRSQLATV 225
>gi|113460321|ref|YP_718382.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 129PT]
gi|170718563|ref|YP_001783397.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
gi|112822364|gb|ABI24453.1| ribulose-5-phosphate 3-epimerase [Haemophilus somnus 129PT]
gi|168826692|gb|ACA32063.1| Ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
Length = 228
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 105/222 (47%), Positives = 151/222 (68%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + I PSIL+A+ +RLGE++ N+ K+GA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 1 MTPYL-IAPSILSANLARLGEDVENVLKSGADVIHFDVMDNHYVPNLTFGPAICKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GIKAPIDVHLMVKPVDRIIPDFAKAGADYITFHPEASEHIDRSLQLIRDCGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D+ID+IL+M+VNPGFGGQ I ST+ K++QA+ +I + + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKIDVILLMSVNPGFGGQAFIPSTLEKLKQARKIIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI + QAGAD+ V GS+ F+Q Y K ++++++
Sbjct: 180 VKVNNIAEIAQAGADMFVAGSAIFDQPD---YKKVIDEMRQQ 218
>gi|298485314|ref|ZP_07003406.1| Ribulose-phosphate 3-epimerase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160164|gb|EFI01193.1| Ribulose-phosphate 3-epimerase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 224
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 105/225 (46%), Positives = 146/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI + R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDESGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ ++ A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRAELAASRA 224
>gi|84514528|ref|ZP_01001892.1| Pentose-5-phosphate-3-epimerase [Loktanella vestfoldensis SKA53]
gi|84511579|gb|EAQ08032.1| Pentose-5-phosphate-3-epimerase [Loktanella vestfoldensis SKA53]
Length = 227
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 138/223 (61%), Gaps = 3/223 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 5 RSIKIAPSILSADFANFGAECRAIEAQGADWVHVDVMDGHFVPNITFGPATCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI+ +D +I A AG DIIT H E+ PHI R+++ I G K GVA+NP TP
Sbjct: 65 GVMDVHLMIAPVDPYIEAFAKAGADIITAHVEAGPHIHRTMQAIRGAGAKAGVALNPATP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
A +E ++D +D++ +MTVNPGFGGQ+ I S + K+RQ +A+IG R I +E+DGGV
Sbjct: 125 AAAVEYLLDMVDLVCVMTVNPGFGGQKFIHSQVEKVRQLRAMIGDRPIHIEIDGGVDPLT 184
Query: 183 IKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALA 222
+ AGAD+LV GS+ F Y + ++ +A A
Sbjct: 185 APLVAAAGADVLVAGSAVFRGGSVSDPAPYGANIRAIRDAAKA 227
>gi|218710785|ref|YP_002418406.1| ribulose-phosphate 3-epimerase [Vibrio splendidus LGP32]
gi|218323804|emb|CAV20161.1| Ribulose-phosphate 3-epimerase [Vibrio splendidus LGP32]
Length = 251
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 28 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 87
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 88 ITAPIDVHLMVKPVDSIVPEFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPA 147
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI + R I LE+DGGV
Sbjct: 148 TPLSCLDYILDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDESGRDIRLEIDGGV 207
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+ + +AGAD+ V GS+ FNQ Y + +++++ ++
Sbjct: 208 KVDNIREIAEAGADMFVAGSAIFNQPN---YKEVIDEMRAELAKVN 250
>gi|116070676|ref|ZP_01467945.1| ribulose-phosphate 3-epimerase [Synechococcus sp. BL107]
gi|116066081|gb|EAU71838.1| ribulose-phosphate 3-epimerase [Synechococcus sp. BL107]
Length = 221
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 135/220 (61%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S+ + PSIL+ADFS+LG E+ + KAGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 AKSLVVSPSILSADFSKLGAEVEAVDKAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLGQIKDLGKKAGAVLNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ D++LIM+VNPGFGGQ IE+ + KI + + R + +EVDGG+
Sbjct: 123 PLDTLEYCLELCDLVLIMSVNPGFGGQSFIENQVQKISDLRKMCDARGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ YAK + ++ S
Sbjct: 183 GSNAWKVIEAGANAIVSGSGVFNQPD---YAKAIEGIRTS 219
>gi|15889141|ref|NP_354822.1| ribulose-phosphate 3-epimerase [Agrobacterium tumefaciens str. C58]
gi|15156953|gb|AAK87607.1| ribulose-phosphate 3-epimerase [Agrobacterium tumefaciens str. C58]
Length = 225
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 119/222 (53%), Positives = 166/222 (74%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I+I PSILAA+F++LG+E++++T+AGA IH DVMDG FVPNISFG DVI++LR +
Sbjct: 1 MSLPIRIAPSILAANFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S + FDCHLMI +D ++ A AGCD IT H E+ PH+ RSL+TI +G+K GV +NP
Sbjct: 61 SMAFFDCHLMIEPVDPYLEAFAKAGCDSITVHAEAGPHLHRSLQTIRGLGRKAGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP++++E+V+D++D+ILIM+VNPGFGGQ+ I + + KIR AKA+IG R I LEVDGGVT+
Sbjct: 121 TPLSVIENVLDDVDLILIMSVNPGFGGQKFIPAMLDKIRAAKAMIGDRPIDLEVDGGVTA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+++ AGA+ LV GS+ F G Y K + L+ +A A
Sbjct: 181 ETAGAIIAAGANALVAGSAVFKGDGVADYRKTVAQLRMAAEA 222
>gi|325132572|gb|EGC55265.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M6190]
gi|325136270|gb|EGC58878.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M0579]
Length = 272
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 151/226 (66%), Gaps = 8/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 31 MT-AYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 89
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 90 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 149
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ + R I++EV
Sbjct: 150 TPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEV 209
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
DGG+ + NI ++ +AGAD V GS+ F + + + +L+KS
Sbjct: 210 DGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKS 255
>gi|260431222|ref|ZP_05785193.1| ribulose-phosphate 3-epimerase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415050|gb|EEX08309.1| ribulose-phosphate 3-epimerase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 229
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 139/221 (62%), Gaps = 4/221 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RKIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I ADAG D +T H E+ PH R+L+ I A G K GVA+NP TP
Sbjct: 65 TVMDVHLMITPVDPYIQAYADAGADYLTAHVEAGPHTHRTLQAIRAAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+E ++D D++ +MTVNPGFGGQ+ I+ T K+R+ + +IG R + +E+DGGV +
Sbjct: 125 AEAVEHLLDLADLVCVMTVNPGFGGQKFIDMT-AKVRRLREMIGDRPVHIEIDGGVDTTT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSA 220
+ AGAD+LV GS+ F Y + + ++ +A
Sbjct: 184 APLVAAAGADVLVAGSAVFKGGSVANPEIYGQNIRAIRAAA 224
>gi|311068100|ref|YP_003973023.1| ribulose-phosphate 3-epimerase [Bacillus atrophaeus 1942]
gi|310868617|gb|ADP32092.1| ribulose-phosphate 3-epimerase [Bacillus atrophaeus 1942]
Length = 216
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 143/218 (65%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LG+EI ++ + GA IH DVMDG FVPNI+ G ++ ++R ++
Sbjct: 2 IKVAPSILSADFASLGKEIKDVEQGGADYIHIDVMDGHFVPNITIGPLIVEAVRPVTELP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG D+I+ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADVISVHAEACPHLHRTIQLIKEHGVKAGVVLNPHTPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+++ VI+E+D++L+MTVNPGFGGQ+ I S +PKI + + L GK I +EVDGGV
Sbjct: 122 MIKHVIEELDLVLLMTVNPGFGGQKFIHSVLPKISEVRRLADVKGKNEILIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++AGA+LLV GS+ + Q K ++D++ S
Sbjct: 182 TAPLCIEAGANLLVAGSAIYGQNDR---KKAISDIRGS 216
>gi|170743524|ref|YP_001772179.1| ribulose-phosphate 3-epimerase [Methylobacterium sp. 4-46]
gi|168197798|gb|ACA19745.1| Ribulose-phosphate 3-epimerase [Methylobacterium sp. 4-46]
Length = 227
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 110/220 (50%), Positives = 153/220 (69%), Gaps = 1/220 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF+RLGEEI ++ AGA IH DVMDG FVPNI+ G DV+R+LR +
Sbjct: 1 MTRPLVIAPSILSADFARLGEEIRDVVAAGADWIHVDVMDGHFVPNITIGPDVVRALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ D ++ A AG D IT H E+ PHI RSL+TI A+GK+ GVAINP
Sbjct: 61 TRAPFDVHLMIAPADPYLEAFAGAGADTITVHAEAGPHIHRSLQTIRALGKRAGVAINPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+P +++E ++D D++L MTVNPGFGGQ I S + + +A+ G R+I +EVDGGVT+
Sbjct: 121 SPASLVEPLLDLADLVLCMTVNPGFGGQSFIGSVCETVARVRAMAGGRAIDIEVDGGVTA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++V+AGA+ LV GS+ F G +YA + ++ +A
Sbjct: 181 ETAPAVVRAGANALVAGSATFRG-GRDAYAANIAAIRGAA 219
>gi|73542705|ref|YP_297225.1| ribulose-phosphate 3-epimerase [Ralstonia eutropha JMP134]
gi|72120118|gb|AAZ62381.1| ribulose-5-phosphate 3-epimerase [Ralstonia eutropha JMP134]
Length = 233
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 139/223 (62%), Gaps = 7/223 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP+ +I PSIL+ADF+RLGEE+ +T+AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 3 TPTYRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHV 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D I A AG +IITFHPE+S H+ RSL I G + G+ NP T
Sbjct: 63 TAPIDVHLMVRPVDRIIPDFAKAGANIITFHPEASEHVDRSLALIRDNGCQAGLVFNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ V+D +D+IL+M+VNPGFGGQ I T+ K+R + I R I LEVD
Sbjct: 123 PLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDAYTERTGRKILLEVD 182
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLK 217
GGV NI + AGAD V GS+ F + + Y ++ L+
Sbjct: 183 GGVKVDNIAEIAAAGADTFVAGSAVFGKPDADGGYRGIISALR 225
>gi|254467231|ref|ZP_05080642.1| ribulose-phosphate 3-epimerase [Rhodobacterales bacterium Y4I]
gi|206688139|gb|EDZ48621.1| ribulose-phosphate 3-epimerase [Rhodobacterales bacterium Y4I]
Length = 229
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 141/220 (64%), Gaps = 4/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RKIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPQAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIDAYADAGADVLTAHFEAGPHIHRTLQAIRGAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+E ++D D++ +MTVNPGFGGQ+ I+ T KIR+ +A+IG R + +E+DGGV
Sbjct: 125 AEAVEHLLDLTDLVCVMTVNPGFGGQKFIDMT-AKIRRLRAMIGDRPVHIEIDGGVDPAT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKKS 219
+ +AGAD+LV GS+ F Y + + ++ +
Sbjct: 184 APLVAEAGADVLVAGSAVFKGGSVSTPEVYGENIRKIRSA 223
>gi|84500485|ref|ZP_00998734.1| Pentose-5-phosphate-3-epimerase [Oceanicola batsensis HTCC2597]
gi|84391438|gb|EAQ03770.1| Pentose-5-phosphate-3-epimerase [Oceanicola batsensis HTCC2597]
Length = 229
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+++I PSIL+ADF+ G EI + GA IH DVMDG FVPN++FG +++++R +
Sbjct: 5 RNLKIAPSILSADFANFGAEIDAVEAQGADWIHVDVMDGHFVPNLTFGPPLVKAIRKHVR 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIEAFADAGADVLTAHVEAGPHIHRTLQAIKGAGMKAGVALNPATP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D++ +MTVNPGFGGQ I S I K+RQ + +IG R I +E+DGG+T
Sbjct: 125 AEAVRHLLDLTDLVCVMTVNPGFGGQSFIHSQIDKVRQLREMIGDRPIHIEIDGGITPAT 184
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKS 219
+ + GAD+LV GS+ F Y + ++ S
Sbjct: 185 APLMREVGADVLVAGSAVFKGGSVDDPAPYGANIRAIRTS 224
>gi|262375630|ref|ZP_06068862.1| ribulose-phosphate 3-epimerase [Acinetobacter lwoffii SH145]
gi|262309233|gb|EEY90364.1| ribulose-phosphate 3-epimerase [Acinetobacter lwoffii SH145]
Length = 228
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 106/218 (48%), Positives = 147/218 (67%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGEE+ N+ +AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEEVENVLEAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVKPVDRMIGDFLEAGADIITFHPEASDHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ LI R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLDKLRQARKLIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
VT NI+ + +AGAD+ V GS+ F + + +
Sbjct: 181 VTPSNIREIAEAGADMFVAGSAIFGKPDYKAVIDEMRA 218
>gi|51892493|ref|YP_075184.1| ribulose-5-phosphate 3-epimerase [Symbiobacterium thermophilum IAM
14863]
gi|51856182|dbj|BAD40340.1| ribulose-5-phosphate 3-epimerase [Symbiobacterium thermophilum IAM
14863]
Length = 220
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 135/214 (63%), Gaps = 4/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF+ LG E++ I AGA H DVMDG FVPNI+FG VI LR S
Sbjct: 1 MKVAPSLLSADFAALGAELAAIEAAGADWAHLDVMDGHFVPNITFGPPVIAKLRPRSKLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I AG D+IT H E+ H+ R L I G K GVA+NP TPV+
Sbjct: 61 FDAHLMIRHPERYIGDFVKAGADLITVHAEACDHLHRVLGQIREAGVKAGVALNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI----SLEVDGGVTS 180
+L V+D +D++LIMTVNPGFGGQ+ I++ +PK+RQA+A++ + + ++VDGGV
Sbjct: 121 VLAHVLDMVDLVLIMTVNPGFGGQRFIDACLPKVRQARAMLAEAGLADRVEIQVDGGVDP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
V+AGA +LV G++ F + + L
Sbjct: 181 HTAPRCVEAGATVLVAGTAVFGKDDYAAAIAALR 214
>gi|325523898|gb|EGD02117.1| ribulose-phosphate 3-epimerase [Burkholderia sp. TJI49]
Length = 228
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 141/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLTLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+ +A + R I LEV
Sbjct: 120 TPLNYLDHVMDRLDYVLLMSVNPGFGGQSFIPETLNKLRETRARLDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y K ++D++ + ++
Sbjct: 180 DGGVKTDNIAEIAAAGADTFVAGSAIFGKPD---YRKVIDDMRAALATVE 226
>gi|257083208|ref|ZP_05577569.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Fly1]
gi|256991238|gb|EEU78540.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Fly1]
Length = 217
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI RSL+ I G K GV INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRSLQMIKNAGVKAGVTINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE+++ KI Q K + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA++ V GS +N + L
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAENPQERIDALRA 213
>gi|212639610|ref|YP_002316130.1| pentose-5-phosphate-3-epimerase [Anoxybacillus flavithermus WK1]
gi|212561090|gb|ACJ34145.1| Pentose-5-phosphate-3-epimerase [Anoxybacillus flavithermus WK1]
Length = 218
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F++LGEEI ++ + GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 VKIAPSILSANFAKLGEEIIDVERGGADYIHVDVMDGHFVPNITIGPLIVEAIRPVTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG D +T H E+ PH+ R++ I G K GVA+NP TP++
Sbjct: 62 LDVHLMIEQPDRYIPTFAKAGADYLTVHVEACPHLHRTIHLIKEHGVKAGVALNPHTPIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E VI+++D++L MTVNPGFGGQ I + +PKI +L+ +R + +EVDGG+ +
Sbjct: 122 MIEHVIEDLDLVLFMTVNPGFGGQSFIPAVLPKIHAFSSLVRERGVSVEIEVDGGIHAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K V+AGA++LV GS+ +NQ + + +
Sbjct: 182 AKLCVEAGANVLVAGSAIYNQADRAKAIRAIRE 214
>gi|194476747|ref|YP_002048926.1| ribulose-phosphate 3-epimerase [Paulinella chromatophora]
gi|171191754|gb|ACB42716.1| ribulose-phosphate 3-epimerase [Paulinella chromatophora]
Length = 222
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 137/219 (62%), Gaps = 2/219 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ I PSIL+ADFSRLGE++ + KAGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKSLMISPSILSADFSRLGEDVVAVDKAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 63 KKPLDVHLMIIEPERYVADFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
++ L+ ++ D++LIM+VNPGFGGQ I+S + KIR+ + + +R + +EVDGGV
Sbjct: 123 SLSSLDYCLELCDLVLIMSVNPGFGGQSFIDSQVNKIRELRRICDERGLDPWIEVDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +++AGA+ +V GS F+Q + + + +K
Sbjct: 183 GSNAWKVIEAGANAIVSGSGIFSQSNYAEAIQGIRNSRK 221
>gi|296133288|ref|YP_003640535.1| ribulose-phosphate 3-epimerase [Thermincola sp. JR]
gi|296031866|gb|ADG82634.1| ribulose-phosphate 3-epimerase [Thermincola potens JR]
Length = 222
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 147/213 (69%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGE+++ + KAG + +H DVMDG FVPNI+ G V+++LR +S V
Sbjct: 2 VKIAPSILSADFARLGEQVAVVEKAGVEYLHIDVMDGHFVPNITIGPLVVKALRPHSKLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS D ++ A AG DII H E+ H+ RS++ I A+GKK V++NP TP+
Sbjct: 62 FDVHLMISEPDRYVEEFARAGADIIGIHAETCLHLHRSIQNIKALGKKVCVSLNPATPLT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
+E V+ ++DM+L+MTVNPGFGGQ+ I + +PKIR + +I ++I +E+DGG+ +
Sbjct: 122 AIEYVLPDLDMVLLMTVNPGFGGQKFIPAVLPKIRALREMINVLGKNIDIEIDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +V+ GA++LV GS+ F + + + +
Sbjct: 182 ARQVVEVGANVLVAGSAIFGAEDIPAAVAGIRN 214
>gi|294783161|ref|ZP_06748485.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 1_1_41FAA]
gi|294480039|gb|EFG27816.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 1_1_41FAA]
Length = 215
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 143/220 (65%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA IH DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTKGIKIAPSILSSDFSKLGEELVAIDKAGADYIHIDVMDGEFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDRPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + I +EVDGG+T
Sbjct: 121 TSEDVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKMRA--DIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ Y +R++ LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----DYKERIDLLKSKA 214
>gi|121533691|ref|ZP_01665518.1| Ribulose-phosphate 3-epimerase [Thermosinus carboxydivorans Nor1]
gi|121307682|gb|EAX48597.1| Ribulose-phosphate 3-epimerase [Thermosinus carboxydivorans Nor1]
Length = 216
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 141/214 (65%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+LAADF+RL EE+ + + GA +H D+MDG FVPN++FGA V+ +LR S
Sbjct: 2 VKIAPSLLAADFTRLAEEVLKVEQGGADLLHLDIMDGHFVPNLTFGAPVVAALRQVSKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ HIN AG D+IT H E+ PH+ R L+TI G + G+A+NP TP+
Sbjct: 62 FDVHLMITNPQDHINAFIKAGADLITVHAETHPHLHRLLQTIKDQGVRAGIALNPSTPLV 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E+V+ +DM+L+M+VNPGFGGQQ I + + KIR+ + +I +R++ +EVDGG+ +
Sbjct: 122 TIEEVLPYVDMVLLMSVNPGFGGQQFISTVLDKIRRLRQMITERNLPVVIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++ AGA +LV GS+ + L L
Sbjct: 182 APAVIAAGATILVAGSAVYGAVDAAQAIASLKGL 215
>gi|194290852|ref|YP_002006759.1| ribulose-phosphate 3-epimerase [Cupriavidus taiwanensis LMG 19424]
gi|193224687|emb|CAQ70698.1| D-ribulose-5-phosphate 3-epimerase [Cupriavidus taiwanensis LMG
19424]
Length = 233
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 102/225 (45%), Positives = 142/225 (63%), Gaps = 8/225 (3%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT P+ +I PSIL+ADF+RLGEE+ +T+AGA IHFDVMD +VPN++ G V ++R
Sbjct: 1 MTQPTFRIAPSILSADFARLGEEVRRVTEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRP 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ + D HLM+ +D I A AG +IITFHPE+S H+ RSL I G + G+ NP
Sbjct: 61 HVSAPIDVHLMVRPVDRIIPDFAKAGANIITFHPEASEHVDRSLALIRDHGCQAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +D+IL+M+VNPGFGGQ I T+ K+R + I R+I LE
Sbjct: 121 ATPLHHLDHVMDRLDVILLMSVNPGFGGQSFIPETLNKLRAVRQRIDAYTARTGRTILLE 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLK 217
VDGGV NI + +AGAD V GS+ F + + Y ++ L+
Sbjct: 181 VDGGVKVDNIAEIARAGADTFVAGSAVFGKPDADGGYRGIISALR 225
>gi|159903537|ref|YP_001550881.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9211]
gi|159888713|gb|ABX08927.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9211]
Length = 221
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 133/219 (60%), Gaps = 2/219 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S+ I PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 1 MKSLAIAPSILSADFSRLGEEVKAVDEAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG D I E+ H+ R+L I +GKK G +NP T
Sbjct: 61 KKPLDVHLMIVEPEKYVADFAKAGADHIYVQVETCQHLHRNLAQIKDLGKKAGAVLNPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ LE ++ D++LIM+VNPGFGGQ IE+ + KIR + + +R + +EVDGG+
Sbjct: 121 KIDTLEYCLELCDLVLIMSVNPGFGGQSFIENQVDKIRDLRTICQERGLDPWIEVDGGIK 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ N +++AGA+ +V GS FNQ K + + K+
Sbjct: 181 AGNAWKVIEAGANAIVSGSGIFNQPDYAQAIKGIRESKR 219
>gi|2833386|sp|Q43157|RPE_SPIOL RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
AltName: Full=Pentose-5-phosphate 3-epimerase;
Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
Precursor
gi|1162980|gb|AAC41677.1| ribulose-5-phosphate 3-epimerase [Spinacia oleracea]
gi|3264788|gb|AAC24708.1| ribulose-phosphate 3-epimerase [Spinacia oleracea]
gi|1587969|prf||2207382A D-ribulose-5-phosphate 3-epimerase
Length = 285
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 137/221 (61%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 59 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 118
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 119 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNP 178
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 179 GTPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGG 238
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
VT N +++AGA+ LV GS+ F K K + K+
Sbjct: 239 VTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKR 279
>gi|225023765|ref|ZP_03712957.1| hypothetical protein EIKCOROL_00629 [Eikenella corrodens ATCC
23834]
gi|224943459|gb|EEG24668.1| hypothetical protein EIKCOROL_00629 [Eikenella corrodens ATCC
23834]
Length = 227
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 142/220 (64%), Gaps = 9/220 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ + AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVQRVIAAGADWIHFDVMDNHYVPNLTFGPMVCAALKPYATVPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG DIITFH E+S HI RSL I G + G+ +NP TPV +
Sbjct: 65 DVHLMVEPVDEMIQAFAKAGADIITFHLEASRHIDRSLSLIRDSGCRAGLVLNPATPVYV 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG------KRSISLEVDGGVT 179
LE V+D++D++L+M+VNPGFGGQ+ I T+ KI Q ++L R I +EVDGG+
Sbjct: 125 LEHVLDKLDVVLLMSVNPGFGGQKFIPHTLEKIEQVRSLTDLYAAESGRRILIEVDGGIK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + AGAD V GS+ FNQ YA + ++++
Sbjct: 185 ADNIAEVAAAGADTFVAGSAIFNQPD---YAAVITEMRRQ 221
>gi|34763687|ref|ZP_00144612.1| Ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27886577|gb|EAA23792.1| Ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 215
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTNGIKIAPSILSSDFSKLGEEVVAIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDKPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKMRA--DIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK V AGA++ V GS F+ +Y +R++ LK A
Sbjct: 179 ETIKVCVDAGANIFVAGSYVFSG----NYKERIDLLKIKA 214
>gi|3264790|gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expression vector
pFL505]
Length = 285
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 137/221 (61%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 59 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 118
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 119 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNP 178
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 179 GTPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGG 238
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
VT N +++AGA+ LV GS+ F K K + K+
Sbjct: 239 VTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKR 279
>gi|59801173|ref|YP_207885.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae FA
1090]
gi|59718068|gb|AAW89473.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae FA
1090]
Length = 230
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 109/229 (47%), Positives = 154/229 (67%), Gaps = 8/229 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-AYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EV
Sbjct: 120 TPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEGKSGRRIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSALA 222
DGG+ + NI ++ +AGAD V GS+ F + + + +L+K+A A
Sbjct: 180 DGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIAAMRAELEKAARA 228
>gi|229918586|ref|YP_002887232.1| ribulose-phosphate 3-epimerase [Exiguobacterium sp. AT1b]
gi|229470015|gb|ACQ71787.1| ribulose-phosphate 3-epimerase [Exiguobacterium sp. AT1b]
Length = 218
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSILAADF+ L E+ + AGA IHFDVMDG FVPNIS G V+ SLR SD V
Sbjct: 2 IKIAPSILAADFANLEAEVKAVQDAGADYIHFDVMDGQFVPNISIGLPVLASLRKKSDMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ AG DI+T H E++ H+ R L+ I A G K GV +NP TP++
Sbjct: 62 LDVHLMIDQPERYVEDFVKAGADIVTVHVEATNHLHRVLQQIKAAGAKCGVVLNPHTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+E ++ ++DM+L+MTVNPGFGGQ IES +PKI L R +E+DGGV
Sbjct: 122 TIEHILQDVDMVLLMTVNPGFGGQAFIESVVPKISALSQLRKDRQLDFEIEIDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K + AGAD+LV GS+ +NQ + +
Sbjct: 182 AKRCIDAGADVLVAGSAIYNQPDYKAAIDSIR 213
>gi|328950440|ref|YP_004367775.1| ribulose-phosphate 3-epimerase [Marinithermus hydrothermalis DSM
14884]
gi|328450764|gb|AEB11665.1| ribulose-phosphate 3-epimerase [Marinithermus hydrothermalis DSM
14884]
Length = 223
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 144/218 (66%), Gaps = 4/218 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+ADF+RLGEE+ AGA +IH DVMDG FVPN++ G V+ +LR +
Sbjct: 3 KIEIAPSILSADFARLGEEVREAEAAGADRIHVDVMDGRFVPNLTMGVVVVEALRRVTRL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLMI + + A AG D++ HPE++PH R+++ I +G + G+A+NP TP+
Sbjct: 63 PLEVHLMIVEPERFLEAFARAGADLLIVHPEATPHAHRAIQQIKELGVRAGLAVNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
A ED++ E+D L+MTVNPGFGGQ+ +E ++P++ + +A+ + + +EVDGG+
Sbjct: 123 AWFEDLLPELDQALLMTVNPGFGGQRFLEQSLPRLERLRAMRDRLNPACRIEVDGGINPE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+VQAGA++LV GSS FN S A+ LN L++S
Sbjct: 183 TAPRVVQAGAEVLVAGSSVFNA--RASVAENLNALRRS 218
>gi|66047838|ref|YP_237679.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. syringae
B728a]
gi|289676187|ref|ZP_06497077.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. syringae
FF5]
gi|63258545|gb|AAY39641.1| Ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. syringae
B728a]
gi|330901995|gb|EGH33320.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330970828|gb|EGH70894.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 224
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 145/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ S+ A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRTELASSRA 224
>gi|255262456|ref|ZP_05341798.1| ribulose-phosphate 3-epimerase [Thalassiobium sp. R2A62]
gi|255104791|gb|EET47465.1| ribulose-phosphate 3-epimerase [Thalassiobium sp. R2A62]
Length = 225
Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 136/220 (61%), Gaps = 3/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 5 RSIKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPATCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI+ +D +I A +G D+IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 GVMDVHLMIAPVDPYIEAFAASGADVITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V +E ++D +D++ +MTVNPGFGGQ I S I K+ + +++IG R I +E+DGGVT
Sbjct: 125 VETVEYLLDMVDLVCLMTVNPGFGGQSFIHSQIEKVAKLRSMIGDRPIHIEIDGGVTPVT 184
Query: 183 IKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKS 219
+ AGAD+LV GS+ F Y + + ++ +
Sbjct: 185 APLVAAAGADVLVAGSAVFKGGSVSNPAPYGENIRAIRSA 224
>gi|294811533|ref|ZP_06770176.1| Ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|294324132|gb|EFG05775.1| Ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
Length = 256
Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 134/223 (60%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ ++QI PSIL+ADFSRL +E + GA +H DVMD FVPN++ G V+ SL +
Sbjct: 28 SMAVQINPSILSADFSRLADEAKAVD--GADWLHVDVMDNHFVPNLTLGVPVVESLGRAT 85
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D+ DCHLMI+ D +AG +TFH E++ R R I A G + +A+ P T
Sbjct: 86 DTPLDCHLMIADPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPAT 145
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LIGK + L+VDGGV+
Sbjct: 146 PIEPYEDLLPELDMLLIMTVEPGFGGQSFLDIMLPKIRRTRELIGKHGLELWLQVDGGVS 205
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + L + ++ LA
Sbjct: 206 DATIERCAEAGADVFVAGSAVYGADDPARAVRALREKAEATLA 248
>gi|169831738|ref|YP_001717720.1| ribulose-phosphate 3-epimerase [Candidatus Desulforudis audaxviator
MP104C]
gi|169638582|gb|ACA60088.1| Ribulose-phosphate 3-epimerase [Candidatus Desulforudis audaxviator
MP104C]
Length = 219
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF RL EEI + +AGA +H DVMDG FVPNIS G V+ SLR S V
Sbjct: 2 IKIAPSILSADFGRLAEEIRKVEEAGADYLHIDVMDGHFVPNISIGPPVVASLRPQSSLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + ++ A+AG DI+T H E++ H+ R+LR I G + GVA+NP TP
Sbjct: 62 FDVHLMIEAPERYVAAFAEAGADILTVHFEAARHLDRTLRLIREHGMRAGVALNPATPPG 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + +PKI + ++ ++ + LEVDGG+
Sbjct: 122 MVEYVLPLVDQVLVMTVNPGFGGQKFLPEVVPKIAGLRRMVERQGVGTDLEVDGGIDPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++V+AGA++LV GS+ + + +RL
Sbjct: 182 APAVVRAGANVLVAGSAVYGAADAAAMVQRLRA 214
>gi|171318009|ref|ZP_02907181.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria MEX-5]
gi|171096795|gb|EDT41672.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria MEX-5]
Length = 228
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 141/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y +++++ + ++
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRTVIDEMRAALGTVE 226
>gi|115350495|ref|YP_772334.1| ribulose-phosphate 3-epimerase [Burkholderia ambifaria AMMD]
gi|170700449|ref|ZP_02891456.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria IOP40-10]
gi|172059526|ref|YP_001807178.1| ribulose-phosphate 3-epimerase [Burkholderia ambifaria MC40-6]
gi|115280483|gb|ABI86000.1| ribulose-5-phosphate 3-epimerase [Burkholderia ambifaria AMMD]
gi|170134661|gb|EDT02982.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria IOP40-10]
gi|171992043|gb|ACB62962.1| Ribulose-phosphate 3-epimerase [Burkholderia ambifaria MC40-6]
Length = 228
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 141/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y +++++ + ++
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRTVIDEMRAALATVE 226
>gi|29377574|ref|NP_816728.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis V583]
gi|227517275|ref|ZP_03947324.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0104]
gi|227554538|ref|ZP_03984585.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HH22]
gi|229547457|ref|ZP_04436182.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|255970690|ref|ZP_05421276.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T1]
gi|255974270|ref|ZP_05424856.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T2]
gi|256618127|ref|ZP_05474973.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 4200]
gi|256761057|ref|ZP_05501637.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T3]
gi|256854789|ref|ZP_05560153.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T8]
gi|256958395|ref|ZP_05562566.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DS5]
gi|256960464|ref|ZP_05564635.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|256962957|ref|ZP_05567128.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HIP11704]
gi|257078294|ref|ZP_05572655.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis JH1]
gi|257088229|ref|ZP_05582590.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis D6]
gi|257091360|ref|ZP_05585721.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis CH188]
gi|257417243|ref|ZP_05594237.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis AR01/DG]
gi|257417962|ref|ZP_05594956.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T11]
gi|257420436|ref|ZP_05597426.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis X98]
gi|293385122|ref|ZP_06630948.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|293389095|ref|ZP_06633567.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|294779985|ref|ZP_06745365.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis PC1.1]
gi|300861589|ref|ZP_07107673.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TUSoD Ef11]
gi|307270567|ref|ZP_07551865.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX4248]
gi|307273617|ref|ZP_07554845.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0855]
gi|307276661|ref|ZP_07557779.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX2134]
gi|307284857|ref|ZP_07565013.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0860]
gi|307288883|ref|ZP_07568856.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0109]
gi|307292135|ref|ZP_07572001.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0411]
gi|312902132|ref|ZP_07761392.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0470]
gi|312905424|ref|ZP_07764538.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0635]
gi|312906694|ref|ZP_07765694.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DAPTO 512]
gi|312910844|ref|ZP_07769680.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DAPTO 516]
gi|312953213|ref|ZP_07772059.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0102]
gi|29345041|gb|AAO82798.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis V583]
gi|227075282|gb|EEI13245.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0104]
gi|227176336|gb|EEI57308.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HH22]
gi|229307489|gb|EEN73476.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|255961708|gb|EET94184.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T1]
gi|255967142|gb|EET97764.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T2]
gi|256597654|gb|EEU16830.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 4200]
gi|256682308|gb|EEU22003.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T3]
gi|256710349|gb|EEU25393.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T8]
gi|256948891|gb|EEU65523.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DS5]
gi|256950960|gb|EEU67592.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|256953453|gb|EEU70085.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HIP11704]
gi|256986324|gb|EEU73626.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis JH1]
gi|256996259|gb|EEU83561.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis D6]
gi|257000172|gb|EEU86692.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis CH188]
gi|257159071|gb|EEU89031.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ARO1/DG]
gi|257159790|gb|EEU89750.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T11]
gi|257162260|gb|EEU92220.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis X98]
gi|291077599|gb|EFE14963.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|291081563|gb|EFE18526.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|294452966|gb|EFG21388.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis PC1.1]
gi|295114429|emb|CBL33066.1| ribulose-5-phosphate 3-epimerase [Enterococcus sp. 7L76]
gi|300849050|gb|EFK76803.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TUSoD Ef11]
gi|306496788|gb|EFM66339.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0411]
gi|306500155|gb|EFM69499.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0109]
gi|306503116|gb|EFM72373.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0860]
gi|306506771|gb|EFM75923.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX2134]
gi|306509630|gb|EFM78672.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0855]
gi|306513148|gb|EFM81782.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX4248]
gi|310627342|gb|EFQ10625.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DAPTO 512]
gi|310628830|gb|EFQ12113.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0102]
gi|310631153|gb|EFQ14436.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0635]
gi|311288867|gb|EFQ67423.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DAPTO 516]
gi|311290796|gb|EFQ69352.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0470]
gi|315026435|gb|EFT38367.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX2137]
gi|315028359|gb|EFT40291.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX4000]
gi|315031803|gb|EFT43735.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0017]
gi|315034819|gb|EFT46751.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0027]
gi|315144151|gb|EFT88167.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX2141]
gi|315150895|gb|EFT94911.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0012]
gi|315152782|gb|EFT96798.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0031]
gi|315154703|gb|EFT98719.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0043]
gi|315159383|gb|EFU03400.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0312]
gi|315161206|gb|EFU05223.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0645]
gi|315167218|gb|EFU11235.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1341]
gi|315171204|gb|EFU15221.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1342]
gi|315172957|gb|EFU16974.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1346]
gi|315573266|gb|EFU85457.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0309B]
gi|315577122|gb|EFU89313.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0630]
gi|315581160|gb|EFU93351.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX0309A]
gi|323479046|gb|ADX78485.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis 62]
gi|327536235|gb|AEA95069.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis OG1RF]
gi|329576768|gb|EGG58261.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1467]
Length = 217
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI R+L+ I G K GV INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQMIKNAGVKAGVTINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE+++ KI Q K + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA++ V GS +N + L
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAENPQERIDALRA 213
>gi|88808515|ref|ZP_01124025.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 7805]
gi|88787503|gb|EAR18660.1| ribulose-phosphate 3-epimerase [Synechococcus sp. WH 7805]
Length = 227
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 138/219 (63%), Gaps = 2/219 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ + PSIL+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 TKSLVVSPSILSADFSRLGEEVKAVDQAGADWIHVDVMDGRFVPNITIGPLIVDALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GK G +NP T
Sbjct: 63 AKPLDVHLMIVEPEKYVADFAKAGADIISVQVEACPHLHRNLAQIKDLGKMAGAVLNPST 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P++ LE ++ D++LIM+VNPGFGGQ I++ + KIR + + ++ + +EVDGGV
Sbjct: 123 PLSTLEYCLELCDLVLIMSVNPGFGGQSFIDNQVQKIRDLRRMCEEKGVDPWIEVDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N +++AGA+ +V GS FNQ + + + D K+
Sbjct: 183 GGNAWKVIEAGANAIVSGSGVFNQPDYAAAIQGIRDSKR 221
>gi|254253353|ref|ZP_04946671.1| Ribulose-phosphate 3-epimerase [Burkholderia dolosa AUO158]
gi|124895962|gb|EAY69842.1| Ribulose-phosphate 3-epimerase [Burkholderia dolosa AUO158]
Length = 228
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 101/230 (43%), Positives = 142/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYIERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y K ++D++ + ++
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRKVIDDMRAALATVE 226
>gi|77917856|ref|YP_355671.1| ribulose-phosphate 3-epimerase [Pelobacter carbinolicus DSM 2380]
gi|77543939|gb|ABA87501.1| ribulose-5-phosphate 3-epimerase [Pelobacter carbinolicus DSM 2380]
Length = 221
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 106/218 (48%), Positives = 146/218 (66%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFSRLGEEI+ I K GA +H DVMDG FVPNI+ G V+ + R +D
Sbjct: 2 IKIAPSILSADFSRLGEEIAAIDKGGADYVHIDVMDGHFVPNITIGPLVVEAARRVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DIIT H E+ PH+ R+++ IH++GKK GV+INP TP+
Sbjct: 62 LDVHLMIENPDRYIPDFAKAGADIITVHYEAVPHLHRTVQLIHSLGKKAGVSINPATPIN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
L+ +++E++++LIM+VNPGFGGQQ I + +PKI + I +R + LEVDGGV N
Sbjct: 122 CLDVILEELELVLIMSVNPGFGGQQFIPACLPKIEALRNTIERRGLSVELEVDGGVKLDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + AGA ++V GS+ + YA + LK +A
Sbjct: 182 IARIAGAGAQVMVAGSAVYGTDD---YAATIASLKTAA 216
>gi|293375002|ref|ZP_06621297.1| ribulose-phosphate 3-epimerase [Turicibacter sanguinis PC909]
gi|292646412|gb|EFF64427.1| ribulose-phosphate 3-epimerase [Turicibacter sanguinis PC909]
Length = 214
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILAADFS L EE+ + GA IH DVMDG FVPNI+ G +++ LR ++
Sbjct: 2 LKIAPSILAADFSMLAEEVKCVDALGADYIHIDVMDGHFVPNITLGPGIVKCLRPHTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I +AG DIIT H E+ H+ R+L+ I GV +NP TP+
Sbjct: 62 FDVHLMIEEPDQYIKEFVEAGADIITVHVEACRHLHRTLQLIKQYNIACGVVLNPHTPLE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+++ V++++D IL+M+VNPGFGGQ I ++ KI + +EVDGGV
Sbjct: 122 MIKHVLNDVDWILVMSVNPGFGGQSFISDSLNKIATLNQWREEFGYEYLIEVDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ QAGAD++V GS+ FN +++
Sbjct: 182 ARLCEQAGADVVVAGSAVFNAPDRKLAIQKIK 213
>gi|296533618|ref|ZP_06896181.1| ribulose-phosphate 3-epimerase [Roseomonas cervicalis ATCC 49957]
gi|296266056|gb|EFH12118.1| ribulose-phosphate 3-epimerase [Roseomonas cervicalis ATCC 49957]
Length = 220
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 103/216 (47%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ ++I PS+LAADF+RLGEE++ I AGA +H D+MDG FVPNISFG V+++LR +
Sbjct: 1 MSRPVKIAPSLLAADFARLGEEVAAIDAAGADWLHLDIMDGHFVPNISFGPSVVKALRRH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMI+ D ++ A+AG + I+ HPE+ PH+ RSL+TI A+G GV +NP
Sbjct: 61 TRMCFDVHLMIAPADPYLAAFAEAGAERISLHPEAGPHLHRSLQTIRALGASPGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV+ +E V+D +D+IL+MTVNPGFGGQ I+S +PKI + +I R I+L++DGGV
Sbjct: 121 TPVSAIEHVMDLVDLILVMTVNPGFGGQSFIDSQLPKIATLRRMIEATGRDIALQIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
T + ++AGAD+LV G++ F + L
Sbjct: 181 TVKTAPRCIEAGADVLVAGTAVFGAPDYAAAIAALR 216
>gi|189461479|ref|ZP_03010264.1| hypothetical protein BACCOP_02138 [Bacteroides coprocola DSM 17136]
gi|189431813|gb|EDV00798.1| hypothetical protein BACCOP_02138 [Bacteroides coprocola DSM 17136]
Length = 219
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 134/219 (61%), Gaps = 2/219 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++I PS+L+A+F+ L E+I I + A +H D+MDG FVPNIS G V++ +
Sbjct: 1 MKNELKISPSLLSANFANLKEDIEKINHSDADWLHIDIMDGVFVPNISVGFPVLKYVAEL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+ D HLMI + I + + G ++ H E+ H+ R ++ I G + GV +NP
Sbjct: 61 SEKPLDVHLMIVQPEKFIREVKELGTMMMNVHYEACTHLHRVVQQIKDAGMRAGVTLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV++L D+I ++DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI + +EVDGGV
Sbjct: 121 TPVSMLTDIISDVDMVLLMSVNPGFGGQKFIPHTLTKVRELRELIDRSGSQALIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
LV+AGAD+LV G++ F + +RL +LK
Sbjct: 181 NLETGSQLVEAGADVLVAGNAVFKAPDMVDIIRRLKELK 219
>gi|78065099|ref|YP_367868.1| ribulose-phosphate 3-epimerase [Burkholderia sp. 383]
gi|77965844|gb|ABB07224.1| ribulose-5-phosphate 3-epimerase [Burkholderia sp. 383]
Length = 228
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 141/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y +++++ + ++
Sbjct: 180 DGGVKTDNIAEIAAAGADTFVAGSAIFGKPD---YRTVIDEMRAALATVE 226
>gi|257080483|ref|ZP_05574844.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis E1Sol]
gi|256988513|gb|EEU75815.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis E1Sol]
Length = 217
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI R+L+ I G K GV+INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQMIKNAGVKAGVSINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE+++ KI Q K + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA++ V GS +N + L
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAENPQERIDALRA 213
>gi|254423519|ref|ZP_05037237.1| ribulose-phosphate 3-epimerase [Synechococcus sp. PCC 7335]
gi|196191008|gb|EDX85972.1| ribulose-phosphate 3-epimerase [Synechococcus sp. PCC 7335]
Length = 233
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 93/225 (41%), Positives = 142/225 (63%), Gaps = 4/225 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSIL+ADFSRLGEEI + KAGA IH DVMDG FVPNI+ G ++ ++R +++
Sbjct: 8 KPVVISPSILSADFSRLGEEIRAVDKAGADWIHVDVMDGRFVPNITIGPMIVDAVRPHTE 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI + ++ A AG DII+ H E +SPH+ R+L I +GK+ GV +NP
Sbjct: 68 KPLDVHLMIVEPEKYVEDFAKAGADIISVHCEHNASPHLHRTLGQIKELGKQAGVVLNPG 127
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + ++E ++ D+ILIM+VNPGFGGQ I + K+++ +A+ +R + +EVDGG+
Sbjct: 128 TNLDMIEYSLELCDLILIMSVNPGFGGQSFIPGMVSKVQKLRAMCDERGLDPWIEVDGGL 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
S N +++AGA+ +V GS+ F + + + ++ LA
Sbjct: 188 KSHNTWQVLEAGANAIVAGSAVFKADDYAEAIESIRNSRRPELAA 232
>gi|16078642|ref|NP_389461.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309454|ref|ZP_03591301.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313779|ref|ZP_03595584.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318703|ref|ZP_03599997.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322974|ref|ZP_03604268.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321315345|ref|YP_004207632.1| ribulose-phosphate 3-epimerase [Bacillus subtilis BSn5]
gi|6647758|sp|O34557|RPE_BACSU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2337808|emb|CAA74252.1| putative CfxE protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633951|emb|CAB13452.1| ribulose-5-phosphate 3-epimerase [Bacillus subtilis subsp. subtilis
str. 168]
gi|291484131|dbj|BAI85206.1| ribulose-phosphate 3-epimerase [Bacillus subtilis subsp. natto
BEST195]
gi|320021619|gb|ADV96605.1| ribulose-phosphate 3-epimerase [Bacillus subtilis BSn5]
Length = 217
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LG EI ++ K GA IH DVMDG FVPNI+ G ++ ++R +D
Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADILSVHAEACPHLHRTIQLIKEQGVKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSR 181
++E V D++D++L+MTVNPGFGGQ+ I S +PKI++ K + ++ + +EVDGGV
Sbjct: 122 VIEHVFDDLDLVLLMTVNPGFGGQKFIHSVLPKIKEVKRMADEKGKKDLLIEVDGGVNKE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++AGA+LLV GS+ + Q +
Sbjct: 182 TAPLVIEAGANLLVAGSAVYGQSDRKKAISEIR 214
>gi|301301416|ref|ZP_07207554.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300850968|gb|EFK78714.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 215
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 139/216 (64%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ + AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADILNLGTDVQKVEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PHI R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHIHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K +AGA + V GS FN E A+R+N L+
Sbjct: 181 VKLCREAGATVAVAGSYVFNSGNETH-AERINKLRN 215
>gi|302185928|ref|ZP_07262601.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. syringae
642]
Length = 224
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 145/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLTSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ S+ A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRTELASSRA 224
>gi|114768780|ref|ZP_01446406.1| ribulose-phosphate 3-epimerase [alpha proteobacterium HTCC2255]
gi|114549697|gb|EAU52578.1| ribulose-phosphate 3-epimerase [alpha proteobacterium HTCC2255]
Length = 228
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 105/218 (48%), Positives = 143/218 (65%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF++LG+EI+++ AGA IH D MDG FVPN++ G +V+ ++R Y
Sbjct: 8 NRPLVIAPSILSADFAKLGDEITSVEAAGADWIHVDPMDGHFVPNLTIGPNVVAAIRPYV 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLMIS D ++ A AG DIIT H ES PH+ RSL+ I + G K GVA+N T
Sbjct: 68 KTVMDVHLMISPADPYLEAFAKAGSDIITVHAESGPHLDRSLQAIRSYGCKAGVALNITT 127
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P++++E +D+ID+ILIMT+NPGFGGQ+ S I KI A+ +IG R I LEVDGGV
Sbjct: 128 PLSVIEYCLDKIDLILIMTINPGFGGQKFTYSMIDKISAARKMIGDRPIWLEVDGGVDPD 187
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGA++LV GS+ F + Y +N +K S
Sbjct: 188 TAPLCWNAGANVLVAGSAVFKDGSQEQYQDNINAIKNS 225
>gi|121997839|ref|YP_001002626.1| ribulose-phosphate 3-epimerase [Halorhodospira halophila SL1]
gi|121589244|gb|ABM61824.1| ribulose-5-phosphate 3-epimerase [Halorhodospira halophila SL1]
Length = 226
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 141/220 (64%), Gaps = 6/220 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG+E++ + +AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILSADFARLGDEVNAVLQAGADVIHFDVMDNHYVPNLTIGPLVCQALRDHGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +D I A AG D ITFHPE+S H+ RSL I G K G+ NP TP+
Sbjct: 66 DVHLMIKPVDRIIPDFAAAGADWITFHPEASEHVDRSLSLIREHGCKAGLVFNPATPLDC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L V D++DM+L+M+VNPGFGGQ+ I T+ KIR+A+ LI + LEVDGG+ + NI
Sbjct: 126 LRYVADKVDMVLLMSVNPGFGGQKFIPGTVDKIREARRLIDELNPGARLEVDGGIKAENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + +AGAD V GS+ F Y + + D++K A
Sbjct: 186 RQVAEAGADTFVAGSAVFGADD---YGQAIADMRKELEAA 222
>gi|78184803|ref|YP_377238.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9902]
gi|78169097|gb|ABB26194.1| ribulose-5-phosphate 3-epimerase [Synechococcus sp. CC9902]
Length = 221
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 135/220 (61%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S+ + PSIL+ADFS+LG E+ + KAGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 3 AKSLVVSPSILSADFSKLGAEVEAVDKAGADWIHVDVMDGRFVPNITIGPLIVEALRPVT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A AG DII+ E+ PH+ R+L I +GKK G +NP T
Sbjct: 63 QKPLDVHLMIVEPEKYVPDFAKAGADIISVQVEACPHLHRNLGQIKDLGKKAGAVLNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ L+ ++ D++LIM+VNPGFGGQ IE+ + KI + + R + +EVDGG+
Sbjct: 123 PLDTLDYCLELCDLVLIMSVNPGFGGQSFIENQVQKISDLRKMCDARGLDPWIEVDGGIK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ +V GS FNQ YAK + ++ S
Sbjct: 183 GSNAWKVIEAGANAIVSGSGVFNQPD---YAKAIEGIRTS 219
>gi|229548026|ref|ZP_04436751.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 29200]
gi|229306902|gb|EEN72898.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 29200]
Length = 217
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI R+L+ I G K GV INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQMIKNAGVKAGVTINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE ++ KI Q K + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIEKSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA++ V GS +N + L
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAENPQERIDALRA 213
>gi|90962920|ref|YP_536835.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius UCC118]
gi|90822114|gb|ABE00752.1| Ribulose-phosphate 3-epimerase [Lactobacillus salivarius UCC118]
gi|300215399|gb|ADJ79812.1| Ribulose-phosphate 3-epimerase [Lactobacillus salivarius CECT 5713]
Length = 215
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 139/216 (64%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ + AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADMLNLGADVQKVEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PHI R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHIHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K +AGA + V GS FN E A+R+N L+
Sbjct: 181 VKLCREAGATVAVAGSYVFNSGNETH-AERINKLRN 215
>gi|328954550|ref|YP_004371884.1| ribulose-phosphate 3-epimerase [Desulfobacca acetoxidans DSM 11109]
gi|328454874|gb|AEB10703.1| ribulose-phosphate 3-epimerase [Desulfobacca acetoxidans DSM 11109]
Length = 231
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 98/217 (45%), Positives = 141/217 (64%), Gaps = 2/217 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADFS LG+E+ + +AGA IH DVMDG FVPNI+ G VI++LR +D F
Sbjct: 3 IIAPSILSADFSCLGKEVRAVVEAGADWIHIDVMDGHFVPNITIGPPVIKALRKITDLPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + +I +AG +II+ H E+S H+ R+L I +G K GV +NP TP+
Sbjct: 63 DVHLMIAQPEGYIADFVEAGANIISVHVEASTHLHRTLTEIRRLGCKPGVVLNPATPLET 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+ V++E+DM+L+MTVNPGFGGQ+ I + PKI + + +I + ++ ++EVDGG I
Sbjct: 123 ITYVLEEVDMVLLMTVNPGFGGQEFINAVSPKIEKLREIIDRLNLPVAIEVDGGANLETI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+ V GS+ FNQ + RL + A
Sbjct: 183 AIMARAGADIFVAGSAIFNQPDYKAAISRLRTVVDRA 219
>gi|15806418|ref|NP_295124.1| ribulose-phosphate 3-epimerase [Deinococcus radiodurans R1]
gi|6459156|gb|AAF10970.1|AE001985_7 ribulose-phosphate 3-epimerase [Deinococcus radiodurans R1]
Length = 299
Score = 284 bits (727), Expect = 7e-75, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 137/216 (63%), Gaps = 4/216 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++++ PSIL+ DFSRLGEE+ I AGA H DVMDG FVPNISFG ++ + R S
Sbjct: 83 ARAVKLAPSILSCDFSRLGEELQAI--AGADWAHVDVMDGAFVPNISFGLPILAAARRAS 140
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLMI + ++ A+AG D IT H E++ HI R+++ I +GKK GV +NP T
Sbjct: 141 NLPMDVHLMIERPERYLRDFAEAGADSITVHVEATQHIHRAVQQIKELGKKAGVTLNPGT 200
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ + ++ ++D++L+M+VNPGFGGQ+ I ++ ++R + + + L+VDGGVT
Sbjct: 201 PLEAVRPLLADVDLVLVMSVNPGFGGQKFIPASTERVRTLRGWLDEVNPQAELQVDGGVT 260
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N + L +AGA LV GS+ + G + +RL D
Sbjct: 261 PANARLLAEAGATCLVAGSAVYGADGGAAGVQRLRD 296
>gi|302132248|ref|ZP_07258238.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 224
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 104/218 (47%), Positives = 143/218 (65%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V +NI+ + AGAD V GS+ FN +++
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRA 217
>gi|254475585|ref|ZP_05088971.1| ribulose-phosphate 3-epimerase [Ruegeria sp. R11]
gi|214029828|gb|EEB70663.1| ribulose-phosphate 3-epimerase [Ruegeria sp. R11]
Length = 229
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 97/224 (43%), Positives = 143/224 (63%), Gaps = 4/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RQIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPMAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQ+ I+ T KIR + +IG R I +E+DGGV +
Sbjct: 125 AEAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-GKIRALRDMIGDRPIHIEIDGGVDPKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSALAI 223
+ +AGAD+LV GS+ F +Y + + +++ +A +
Sbjct: 184 APLVAEAGADVLVAGSAVFKGGSVDNPEAYGENIRNIRAAANGV 227
>gi|297797095|ref|XP_002866432.1| hypothetical protein ARALYDRAFT_919384 [Arabidopsis lyrata subsp.
lyrata]
gi|297312267|gb|EFH42691.1| hypothetical protein ARALYDRAFT_919384 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 93/227 (40%), Positives = 141/227 (62%), Gaps = 5/227 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 55 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 114
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 115 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNP 174
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 175 GTPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGG 234
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK-SALAI 223
VT N +++AGA+ LV GS+ F K K + K+ A+A+
Sbjct: 235 VTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPEAVAV 281
>gi|237739711|ref|ZP_04570192.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 2_1_31]
gi|229423319|gb|EEO38366.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 2_1_31]
Length = 215
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 142/217 (65%), Gaps = 6/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA IH DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTKGIKIAPSILSSDFSKLGEELVAIDKAGADYIHIDVMDGEFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDRPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + I +EVDGG+T
Sbjct: 121 TSEDVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKMRA--DIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
IK AGA++ V GS F+ Y +R++ LK
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----DYKERIDLLK 211
>gi|237737097|ref|ZP_04567578.1| ribulose-phosphate 3-epimerase [Fusobacterium mortiferum ATCC 9817]
gi|229420959|gb|EEO36006.1| ribulose-phosphate 3-epimerase [Fusobacterium mortiferum ATCC 9817]
Length = 212
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 106/217 (48%), Positives = 155/217 (71%), Gaps = 6/217 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I+I PSIL+ADFS+LGEE+ I KAGA +H DVMDG FVPN++FGA VI+++R+ +
Sbjct: 1 MSNIKIAPSILSADFSKLGEEVIAIDKAGADYVHIDVMDGIFVPNLTFGAPVIKAIRNKT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D VFD HLMI + +I A+AG DII H ES+ H+ R ++ I A GKK GV++NP T
Sbjct: 61 DLVFDVHLMIDRPERYIEDFANAGADIIVVHAESTIHLHRVIQQIKATGKKAGVSLNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +L+ +ID++DM+L+M+VNPGFGGQ+ IES + KI+ +AL +++ ++VDGG+T +
Sbjct: 121 PVDVLKYIIDDLDMVLVMSVNPGFGGQKFIESAVQKIKDVRAL--SKTVDIQVDGGITDK 178
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I ++AGA++ V GS F+ Y +R+ LK+
Sbjct: 179 TIGRCIEAGANVFVAGSYVFSG----DYKERIESLKR 211
>gi|330945653|gb|EGH47134.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 224
Score = 283 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 145/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASARDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ S+ A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRTELASSRA 224
>gi|325843352|ref|ZP_08167935.1| ribulose-phosphate 3-epimerase [Turicibacter sp. HGF1]
gi|325489381|gb|EGC91754.1| ribulose-phosphate 3-epimerase [Turicibacter sp. HGF1]
Length = 214
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILAADFS L EE+ + GA IH DVMDG FVPNI+ G +++ LR ++
Sbjct: 2 LKIAPSILAADFSMLAEEVKCVDALGADYIHIDVMDGHFVPNITLGPGIVKCLRPHTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I +AG DIIT H E+ H+ R+L+ I GV +NP TP+
Sbjct: 62 FDVHLMIEEPDQYIKEFVEAGADIITVHVEACRHLHRTLQLIKQYNIACGVVLNPHTPLE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+++ V++++D IL+M+VNPGFGGQ I ++ KI + +EVDGGV
Sbjct: 122 MIKHVLNDVDWILVMSVNPGFGGQSFISDSLNKITTLNQWREEFGYEYLIEVDGGVNEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ QAGAD++V GS+ FN +++
Sbjct: 182 ARLCEQAGADVVVAGSAVFNAPDRKLAIQKIK 213
>gi|323141169|ref|ZP_08076070.1| ribulose-phosphate 3-epimerase [Phascolarctobacterium sp. YIT
12067]
gi|322414312|gb|EFY05130.1| ribulose-phosphate 3-epimerase [Phascolarctobacterium sp. YIT
12067]
Length = 214
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 136/212 (64%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +EI I AGA +H DVMDG FVPN++FGA V++ +R +D
Sbjct: 3 IKVAPSILSADFAYLADEIKKIEAAGADWVHIDVMDGQFVPNLTFGAPVVKKIRKVTDLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLM+ + + +I AG D I H E++ H+ R ++ I A G K GVA+NP T +
Sbjct: 63 FDCHLMVENPEKYIADFKAAGADQIVVHVETTKHLHRCIQQIKAEGMKAGVALNPATSLG 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E+++ +DM+L+MTVNPGFGGQ IE +PKI + A+I +R + ++VDGGV +
Sbjct: 123 TVEEILPYVDMVLLMTVNPGFGGQSFIEGVVPKIERLHAMITERGLNVDIQVDGGVNAET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K + AGA++LV GS + + + L
Sbjct: 183 SKLVKAAGANVLVAGSYVYGAEDTAAAIASLK 214
>gi|19704015|ref|NP_603577.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296327590|ref|ZP_06870136.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|19714203|gb|AAL94876.1| Ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296155416|gb|EFG96187.1| ribulose-phosphate 3-epimerase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 215
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE++ I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTNGIKIAPSILSSDFSKLGEEVAAIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +FD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K G+++NP
Sbjct: 61 TGLIFDVHLMIDKPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGIKAGISLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKMRV--DIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK V AGA++ V GS F+ +Y +R++ LK A
Sbjct: 179 ETIKVCVDAGANIFVAGSYVFSG----NYKERIDLLKLKA 214
>gi|28867794|ref|NP_790413.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213967660|ref|ZP_03395807.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato T1]
gi|301381524|ref|ZP_07229942.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
Max13]
gi|302062594|ref|ZP_07254135.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
K40]
gi|28851029|gb|AAO54108.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213927436|gb|EEB60984.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tomato T1]
gi|330878380|gb|EGH12529.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|331017616|gb|EGH97672.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 224
Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 104/218 (47%), Positives = 142/218 (65%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + AGAD V GS+ FN +++
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRA 217
>gi|163738986|ref|ZP_02146399.1| Ribulose-phosphate 3-epimerase [Phaeobacter gallaeciensis BS107]
gi|161387791|gb|EDQ12147.1| Ribulose-phosphate 3-epimerase [Phaeobacter gallaeciensis BS107]
Length = 229
Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RSIKIAPSILSADFANFGQEIQAIESQGADWVHIDVMDGHFVPNLTFGPMAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I A G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRAAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQ+ I+ T K+R +A+IG R + +E+DGGV +
Sbjct: 125 AEAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-SKVRSLRAMIGDRPVHIEIDGGVDPKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSALAI 223
+ +AGAD+LV GS+ F Y + + +++ +A +
Sbjct: 184 APLVAEAGADVLVAGSAVFKGGSVDTPEVYGENIRNIRAAASGV 227
>gi|261344690|ref|ZP_05972334.1| ribulose-phosphate 3-epimerase [Providencia rustigianii DSM 4541]
gi|282567610|gb|EFB73145.1| ribulose-phosphate 3-epimerase [Providencia rustigianii DSM 4541]
Length = 224
Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 96/225 (42%), Positives = 137/225 (60%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++FGA + +LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTFGAPICEALRKYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG I+FHPE+S H+ R+L+ I G G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGATHISFHPEASEHVDRTLQLIKESGCTAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++DMIL+M+VNPGFGGQ I T+ K+RQ + +I + + EVDGGV
Sbjct: 121 TPLSYLDYVMDKVDMILLMSVNPGFGGQSFIPQTLNKLRQVRKMIDESGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD V GS+ F Q Y ++ ++K +
Sbjct: 181 KVDNIAEIAAAGADTFVAGSAIFGQPD---YKAVIDAMRKELQKV 222
>gi|126730301|ref|ZP_01746112.1| ribulose-phosphate 3-epimerase [Sagittula stellata E-37]
gi|126709034|gb|EBA08089.1| ribulose-phosphate 3-epimerase [Sagittula stellata E-37]
Length = 230
Score = 283 bits (726), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/218 (44%), Positives = 141/218 (64%), Gaps = 4/218 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
S++I PSIL+ADF+ G EI I GA IH DVMDG FVPN++FG +++ R +
Sbjct: 5 RSVKIAPSILSADFADFGREIQAIEAQGADWIHVDVMDGHFVPNLTFGPPAVKAFRKHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ A+AG DI+T H E+ PH R+L+ I A G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIDAYAEAGADILTAHVEAGPHTHRTLQAIRAAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+E ++D D++ +MTVNPGFGGQ+ I+ T K+R +A+IG R + +E+DGGVT
Sbjct: 125 AQAVEHLLDLADLVCVMTVNPGFGGQKFIDMT-GKVRALRAMIGDRPVHIEIDGGVTPET 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLK 217
+V+AGAD+LV GS+ F Y + + ++
Sbjct: 184 APLVVEAGADVLVAGSAVFKGGSVDNPAPYGENIRAIR 221
>gi|290473144|ref|YP_003466005.1| D-ribulose-5-phosphate 3-epimerase [Xenorhabdus bovienii SS-2004]
gi|289172438|emb|CBJ79205.1| D-ribulose-5-phosphate 3-epimerase [Xenorhabdus bovienii SS-2004]
Length = 224
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 140/221 (63%), Gaps = 6/221 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++L Y
Sbjct: 1 MKKDFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALCDY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 GITAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGF GQ I T+ K+RQ + +I + + EVDGG
Sbjct: 121 ATPLSYLDYVLDKLDVILLMSVNPGFSGQSFIPETLNKLRQVRKIIDESGYDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + NI+ QAGAD+ V GS+ F+Q Y ++++++
Sbjct: 181 IKANNIREAAQAGADMFVAGSAIFSQPD---YKTVIDEMRR 218
>gi|332703764|ref|ZP_08423852.1| ribulose-phosphate 3-epimerase [Desulfovibrio africanus str. Walvis
Bay]
gi|332553913|gb|EGJ50957.1| ribulose-phosphate 3-epimerase [Desulfovibrio africanus str. Walvis
Bay]
Length = 240
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/203 (44%), Positives = 138/203 (67%), Gaps = 2/203 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PS+L+ADF RL +E++ + + G + +H+DVMDG FVPNI+FG VI++LR+ S
Sbjct: 14 AKKIILSPSLLSADFGRLADELAALEEGGIEWVHWDVMDGVFVPNITFGPPVIKALRNRS 73
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FDCHLM+ + +IN DAG ++I H E++ H+ R++ I G K VA+NP T
Sbjct: 74 KLFFDCHLMVIKPERYINDFLDAGANLICVHAEATSHLERTVSQIREAGIKAAVALNPAT 133
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+A +E ++ E+DM+LIM+VNPGFGGQ I ++ KIR+ + +I ++ ++VDGG+T
Sbjct: 134 SLASIEYLLPELDMVLIMSVNPGFGGQVFIPFSLEKIRRLRKMIDEQGAKTLIQVDGGIT 193
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
NI +V AGA+++V GSSFF
Sbjct: 194 PENIAPIVDAGAEVIVSGSSFFK 216
>gi|330963859|gb|EGH64119.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 224
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 104/218 (47%), Positives = 142/218 (65%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + AGAD V GS+ FN +++
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRA 217
>gi|224124194|ref|XP_002330128.1| predicted protein [Populus trichocarpa]
gi|222871262|gb|EEF08393.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/227 (40%), Positives = 141/227 (62%), Gaps = 5/227 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 60 KSDIIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 119
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E ++ H+ R+L I ++G K GV +NP
Sbjct: 120 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTATIHLHRTLNMIKSLGAKAGVVLNP 179
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + + ++ ++ +EVDGG
Sbjct: 180 ATPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISELRRMCVEKGVNPWIEVDGG 239
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK-SALAI 223
V +N +++AGA+ LV GS+ F + + K+ A+A+
Sbjct: 240 VGPKNAYKVIEAGANALVAGSAVFGAPDYAEAIRGIKSSKRPEAVAV 286
>gi|169827069|ref|YP_001697227.1| ribulose-phosphate 3-epimerase [Lysinibacillus sphaericus C3-41]
gi|168991557|gb|ACA39097.1| Ribulose-phosphate 3-epimerase [Lysinibacillus sphaericus C3-41]
Length = 222
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 147/219 (67%), Gaps = 2/219 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSILAA+F++LGEE+ + +AGAK IH DVMDG FVPNISFG+ V+ ++R +D
Sbjct: 2 IQIAPSILAANFAKLGEEVKEVEQAGAKLIHIDVMDGHFVPNISFGSIVLDAIRPLTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 62 LDVHLMIENPDQYIEQFAQAGADYITVHAEACRHLHRTIQLIRSYGIKAGVVLNPHTPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ V+++IDM+L+MTVNPGFGGQ+ I S +PKI LI +R + +E+DGG+T+
Sbjct: 122 SIQHVLEDIDMVLLMTVNPGFGGQKFIHSVVPKIEALSTLIKERGLDIAIEIDGGITAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I QAGA + V GS+ ++++ + + + ++A+
Sbjct: 182 IVPCAQAGATIFVAGSAIYSKEDRTAALQEILAAGEAAI 220
>gi|86140257|ref|ZP_01058818.1| ribulose-phosphate 3-epimerase [Roseobacter sp. MED193]
gi|85823060|gb|EAQ43274.1| ribulose-phosphate 3-epimerase [Roseobacter sp. MED193]
Length = 245
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 143/221 (64%), Gaps = 4/221 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 21 RKIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPMAVKAFRPHVK 80
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMIS +D++I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 81 TVMDVHLMISPVDAYIDAYADAGADVLTAHIEAGPHIHRTLQAIRGAGMKAGVALNPGTP 140
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQQ I+ T K+RQ + +IG R + +E+DGGV +
Sbjct: 141 AEAVSHLLDLTDLICVMTVNPGFGGQQFIDMT-AKVRQLRQMIGDRPVHIEIDGGVDPKT 199
Query: 183 IKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKKSA 220
+V+AGAD+LV GS+ F Y + + ++ +A
Sbjct: 200 APLVVEAGADVLVAGSAVFKGGSVSTPEVYGENMRAIRAAA 240
>gi|317129253|ref|YP_004095535.1| ribulose-phosphate 3-epimerase [Bacillus cellulosilyticus DSM 2522]
gi|315474201|gb|ADU30804.1| ribulose-phosphate 3-epimerase [Bacillus cellulosilyticus DSM 2522]
Length = 218
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 143/212 (67%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+A+FS+LGEEI ++ K GA IH DVMDG FVPNI+ G+ V+ ++R +
Sbjct: 2 IKVAPSILSANFSKLGEEIIDVEKGGADYIHIDVMDGHFVPNITMGSLVVNAIRPLTKLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D I A AG DII+ H E++PH+ R+++ I +G K GV +NP TP++
Sbjct: 62 LDVHLMIENPDLFIEDFAKAGADIISVHVEATPHLHRTIQHIKDLGVKPGVVLNPATPIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L +I+++D+IL+MTVNPGFGGQ I S IPKI Q K L+ ++ I +EVDGGV
Sbjct: 122 SLYHIIEDVDLILLMTVNPGFGGQSFIPSVIPKIVQVKELVSKVEKDIDIEVDGGVNPDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++AGA++LV GS+ +N K + + +
Sbjct: 182 ARQCIEAGANVLVAGSAIYNSKNRRTAIENIR 213
>gi|304393425|ref|ZP_07375353.1| ribulose-phosphate 3-epimerase [Ahrensia sp. R2A130]
gi|303294432|gb|EFL88804.1| ribulose-phosphate 3-epimerase [Ahrensia sp. R2A130]
Length = 223
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 105/220 (47%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT + I PSIL+ADFSRLG+EI + +AG +H DVMDG FVPNI+FGA +++++R+
Sbjct: 1 MTDRPLLIAPSILSADFSRLGDEIEAVMEAGGDWVHLDVMDGHFVPNITFGAPIVKAVRN 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ +VFDCHLMI D+++ A+AG DIIT H E++ H+ RSL+ I +G K GVA+NP
Sbjct: 61 RTKAVFDCHLMIEPTDAYLKDFAEAGADIITVHAEATRHLDRSLQAIRDLGAKAGVALNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP + + V+D +D+IL+MTVNPGFGGQ I + + K+ + + +IG R I +E+DGGVT
Sbjct: 121 ATPESEIAYVLDRVDLILLMTVNPGFGGQAFIPAVVDKVARVREMIGDRPIHIEIDGGVT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+LV GS+ F YA ++ ++KS
Sbjct: 181 PTTAPMVFGAGADVLVAGSAVFKGGTLAHYASNIDAIRKS 220
>gi|330955081|gb|EGH55341.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae Cit 7]
Length = 224
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 145/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLGFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ S+ A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRTELASSRA 224
>gi|257483123|ref|ZP_05637164.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289627673|ref|ZP_06460627.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289648992|ref|ZP_06480335.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330868507|gb|EGH03216.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330985781|gb|EGH83884.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|331011645|gb|EGH91701.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 224
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 105/225 (46%), Positives = 145/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ ++ A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRAELAASRA 224
>gi|312795923|ref|YP_004028845.1| Ribulose-phosphate 3-epimerase [Burkholderia rhizoxinica HKI 454]
gi|312167698|emb|CBW74701.1| Ribulose-phosphate 3-epimerase (EC 5.1.3.1) [Burkholderia
rhizoxinica HKI 454]
Length = 235
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 97/224 (43%), Positives = 138/224 (61%), Gaps = 9/224 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 12 KMTFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCEAIRPHV 71
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP T
Sbjct: 72 NVPIDVHLMVRPVDRLVPDFARAGANVISFHPEASDHIDRTLSLIRDHGCKAGLVFNPAT 131
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
+ L+ V++ ID++LIM+VNPGFGGQ I + K+R+A+ I R I LEVD
Sbjct: 132 SLNYLDHVMERIDLVLIMSVNPGFGGQSFIPEALNKLREARRRINAYAAQTGREIHLEVD 191
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GGV + NI + AGAD V GS+ F Q Y + +N ++ +
Sbjct: 192 GGVKADNIAQIAAAGADTFVAGSAIFGQPD---YRQVINQMRAA 232
>gi|315146588|gb|EFT90604.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX4244]
gi|315164410|gb|EFU08427.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1302]
Length = 217
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G +++ ++R +
Sbjct: 1 MKLAPSILSADFANLERDIRLVEELGADYIHVDVMDGQFVPNITLGPNIVSAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN A+AG DIIT H E++PHI R+L+ I G K GV INP TP++
Sbjct: 61 LDVHLMIVQPENYINAFAEAGADIITVHQEATPHIHRALQIIKNAGVKAGVTINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E+V+D D +L+MTVNPGFGGQ IE+++ KI Q K + +EVDGG+
Sbjct: 121 MIENVLDLADQVLVMTVNPGFGGQSFIENSLEKIAQLKEWKETKGYTYEIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA++ V GS +N + L
Sbjct: 181 AARCKEAGAEVFVAGSYIYNAENPQERIDALRA 213
>gi|284928778|ref|YP_003421300.1| ribulose-5-phosphate 3-epimerase [cyanobacterium UCYN-A]
gi|284809237|gb|ADB94942.1| ribulose-5-phosphate 3-epimerase [cyanobacterium UCYN-A]
Length = 228
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 141/226 (62%), Gaps = 7/226 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PSIL+ADFS L EEI + KAGA IH DVMDG FVPNI+ G V+ ++R Y+
Sbjct: 5 NKPIVISPSILSADFSCLREEIELVDKAGADWIHIDVMDGRFVPNITIGPLVVEAIRPYT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + +I +AG DII+ H E +S H+ R+L I +GKK GV +NP
Sbjct: 65 KKPLDVHLMIVEPEKYITDFVNAGADIISIHAENNASLHLHRTLGQIKELGKKAGVVLNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ +E V++ D+ILIM+VNPGFGGQ I + + KI Q + + K+ + +EVDGG
Sbjct: 125 ATPLTSIEHVLEICDLILIMSVNPGFGGQSFIPTMLDKIYQLRQICNKKGLDPWIEVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ N +++AGA+ +V GS+ F +YA+ + +++S +I
Sbjct: 185 LKPENTWKVIEAGANSIVAGSAIFKS---ANYAEAIRGIRESKSSI 227
>gi|90420024|ref|ZP_01227933.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Aurantimonas manganoxydans SI85-9A1]
gi|90336065|gb|EAS49813.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Aurantimonas manganoxydans SI85-9A1]
Length = 226
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 107/209 (51%), Positives = 147/209 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF+RLGEE++ + +AGA IH DVMDG FVPNI+FG VI+++R
Sbjct: 1 MAKPVIIAPSILSADFARLGEEVAAVDQAGADWIHLDVMDGHFVPNITFGPPVIKAVRGA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S +FDCHLMI DS++ A+AGCD IT H E++ H+ RSL+ I +GKK GV++NP
Sbjct: 61 SQKIFDCHLMIEPCDSYLEAFAEAGCDYITVHAEATKHLDRSLQAIRNLGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++ V+D +D++L+MTVNPGFGGQ I S + K+R+ KA+IG R I +E+DGGVT
Sbjct: 121 TPEDVIAYVLDRLDLVLLMTVNPGFGGQAFIPSVVEKVRRVKAMIGDRDIHIEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+V+AGA++LV GS+ F Y
Sbjct: 181 ETAPLVVEAGANVLVAGSAVFKGGTPEHY 209
>gi|301155034|emb|CBW14497.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus parainfluenzae
T3T1]
Length = 223
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GIKAPIDVHLMVKPVDRIIPDFAKAGADYITFHPEASEHIDRSLQLIRDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ + ST+ K++QA+ LI + + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVILLMSVNPGFGGQSFLPSTLRKLQQARRLIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKEDNIAEIAAAGADMFVAGSAIFGKPD---YKQIIDQMRAQLASV 222
>gi|293572648|ref|ZP_06683616.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E980]
gi|291607234|gb|EFF36588.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E980]
Length = 216
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + + ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKITELADLRKENNWSYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|323701789|ref|ZP_08113460.1| ribulose-phosphate 3-epimerase [Desulfotomaculum nigrificans DSM
574]
gi|323533325|gb|EGB23193.1| ribulose-phosphate 3-epimerase [Desulfotomaculum nigrificans DSM
574]
Length = 219
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 87/221 (39%), Positives = 141/221 (63%), Gaps = 5/221 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L + + + +AGA+ +H DVMDG FVPNI+ G ++++LR S+
Sbjct: 2 VKIAPSILSADFANLAQAVQVVEQAGAEYLHIDVMDGHFVPNITIGPLIVKALRPRSNMF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I+ AG D++ H E+ H+ R + + +G K GVA+NP TP+
Sbjct: 62 FDVHLMIEQPDRYISDFVKAGADLVCVHAEACTHLHRCVSQVKELGAKVGVALNPHTPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
I+E ++ +D++L+MTVNPGFGGQ+ I +PKI++ +I ++ + +EVDGG+ S
Sbjct: 122 IIEYILPMLDLVLLMTVNPGFGGQKFIPEVLPKIKRLSQIIKEQGLATEIEVDGGINSET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ AGA++LV GS+ F + + D++K+A +
Sbjct: 182 ATLVTGAGANVLVAGSAIFGADNP---GQAVKDIRKAAANL 219
>gi|300215487|gb|ADJ79900.1| Ribulose-phosphate 3-epimerase [Lactobacillus salivarius CECT 5713]
Length = 215
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 139/216 (64%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ I AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADMLNLGADVQKIEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PHI R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHIHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K +AGA + V GS FN E A+R+N L+
Sbjct: 181 VKLCREAGATVAVAGSYVFNSGNETH-AERINKLRN 215
>gi|218528983|ref|YP_002419799.1| ribulose-phosphate 3-epimerase [Methylobacterium chloromethanicum
CM4]
gi|218521286|gb|ACK81871.1| Ribulose-phosphate 3-epimerase [Methylobacterium chloromethanicum
CM4]
Length = 227
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 4 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP + +
Sbjct: 64 VHLMIAPADPYLAAFAEAGSDAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D +D++L+MTVNPGFGGQ I S++ + + KA+ RSI + VDGG+T
Sbjct: 124 EPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPETAGPA 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
QAGA++LV GS+ F G Y K + ++++A +
Sbjct: 184 AQAGANILVAGSAAFKG-GATQYEKNVAAIREAAQSA 219
>gi|315635245|ref|ZP_07890522.1| ribulose-phosphate 3-epimerase [Aggregatibacter segnis ATCC 33393]
gi|315475991|gb|EFU66746.1| ribulose-phosphate 3-epimerase [Aggregatibacter segnis ATCC 33393]
Length = 224
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 150/226 (66%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ N+ K G +HFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVENVLKCGGDVVHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPESS HI R+L+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGASYITFHPESSEHIDRTLQLIRDNGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++QA+ I + + + EVDGG
Sbjct: 120 ATPLSYLDYVMDKVDIILLMSVNPGFGGQSFIPATLEKLKQARKRIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI + +AGAD+ V GS+ F+Q Y K ++++++ A+
Sbjct: 180 VKASNIAEIARAGADMFVAGSAIFDQPD---YKKVIDEMRQQLAAV 222
>gi|227552682|ref|ZP_03982731.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX1330]
gi|257888650|ref|ZP_05668303.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,141,733]
gi|257897394|ref|ZP_05677047.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com12]
gi|293378846|ref|ZP_06625001.1| ribulose-phosphate 3-epimerase [Enterococcus faecium PC4.1]
gi|227178187|gb|EEI59159.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX1330]
gi|257824704|gb|EEV51636.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,141,733]
gi|257833959|gb|EEV60380.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com12]
gi|292642387|gb|EFF60542.1| ribulose-phosphate 3-epimerase [Enterococcus faecium PC4.1]
Length = 216
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + + ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKIAELADLRKENNWSYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKVCKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|126649669|ref|ZP_01721905.1| ribulose-phosphate 3-epimerase [Bacillus sp. B14905]
gi|126593388|gb|EAZ87333.1| ribulose-phosphate 3-epimerase [Bacillus sp. B14905]
Length = 223
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 148/219 (67%), Gaps = 2/219 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSILAA+F++LGEE+ + +AGAK IH DVMDG FVPNISFG+ V+ ++R +D
Sbjct: 3 IQIAPSILAANFAKLGEEVKEVEQAGAKLIHIDVMDGHFVPNISFGSIVLDAIRPLTDLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 63 LDVHLMIENPDQYIEQFAQAGADYITVHVEACRHLHRTIQLIRSYGIKAGVVLNPHTPIE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ V+++IDM+L+MTVNPGFGGQ+ I S +PKI +LI +R + +E+DGG+T+
Sbjct: 123 SIQHVLEDIDMVLLMTVNPGFGGQKFIHSVVPKIEALSSLIKERGLDIAIEIDGGITAET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I QAGA + V GS+ ++++ + + + ++A+
Sbjct: 183 IVPCAQAGATIFVAGSAIYSKEDRTAALQEILAAGEAAI 221
>gi|254510559|ref|ZP_05122626.1| ribulose-phosphate 3-epimerase [Rhodobacteraceae bacterium KLH11]
gi|221534270|gb|EEE37258.1| ribulose-phosphate 3-epimerase [Rhodobacteraceae bacterium KLH11]
Length = 229
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 99/224 (44%), Positives = 142/224 (63%), Gaps = 4/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RSIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMIS +D +I ADAG D++T H E+ PH R+L+ I A G K G+A+NP TP
Sbjct: 65 TVMDVHLMISPVDPYIQAYADAGADVLTAHVEAGPHSHRTLQAIRAAGMKAGIALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+E ++D D+I +MTVNPGFGGQ+ I+ T KI + +A+IG R I +E+DGGV +
Sbjct: 125 AEAVEHLLDLTDLICVMTVNPGFGGQKFIDMT-AKISRLRAMIGDRPIHIEIDGGVDPKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
+ AGAD+LV GS+ F Y + ++ +A ++
Sbjct: 184 APLVAAAGADVLVAGSAVFKGGSVANPSIYGDNIRAVRAAAESV 227
>gi|150396702|ref|YP_001327169.1| ribulose-phosphate 3-epimerase [Sinorhizobium medicae WSM419]
gi|150028217|gb|ABR60334.1| Ribulose-phosphate 3-epimerase [Sinorhizobium medicae WSM419]
Length = 226
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 116/220 (52%), Positives = 157/220 (71%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADFS+LG+E+ ++T+AGA IH DVMDG FVPNI+FG DVI+SLR +
Sbjct: 2 MTHPIRIAPSILAADFSKLGQEVRDVTQAGADWIHLDVMDGHFVPNITFGPDVIKSLRPH 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D + A AGCDIIT H E+ PH+ RSL+T+ ++GKK GV++NP
Sbjct: 62 TQATFDCHLMIAPADPFLEAFAKAGCDIITVHAEAGPHLHRSLQTVRSLGKKAGVSLNPA 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP LE V+D +D++L+MTVNPGFGGQ+ +++T KIR+ KA+IG R I +EVDGG+
Sbjct: 122 TPEDALEYVLDTVDLVLVMTVNPGFGGQKFVDATEEKIRRIKAMIGSRPIEIEVDGGIAP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA++LV GS+ F SY + L+ A
Sbjct: 182 ETAAVAAKAGANVLVAGSAIFKGGSVESYRGAIETLRARA 221
>gi|253582227|ref|ZP_04859450.1| ribulose-phosphate 3-epimerase [Fusobacterium varium ATCC 27725]
gi|251835766|gb|EES64304.1| ribulose-phosphate 3-epimerase [Fusobacterium varium ATCC 27725]
Length = 218
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 108/217 (49%), Positives = 152/217 (70%), Gaps = 6/217 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I++ PSIL+ADFS+LGEE+ I KAGA IH DVMDG FVPNI+FGA VI+S+R+ +
Sbjct: 7 MSNIKVAPSILSADFSKLGEEVIAIDKAGADYIHIDVMDGMFVPNITFGAPVIKSIRNKT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFD HLMI + +I+ AG DIIT H ES+ H+ R ++ I A G K GV++NP T
Sbjct: 67 KLVFDVHLMIEKPERYIDDFVKAGADIITVHAESTVHLHRVIQQIKAYGIKAGVSLNPST 126
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +L+ +I++IDM+LIM+VNPGFGGQ+ I S I KI+ + L +S+ ++VDGG+T+
Sbjct: 127 PVDVLKYIINDIDMVLIMSVNPGFGGQKFINSAIDKIKDVRKL--NKSVDIQVDGGITAD 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I ++AGA++ V GS F+ Y +R+N LK+
Sbjct: 185 TIGKCIEAGANIFVAGSYVFSG----DYKERINSLKR 217
>gi|225457361|ref|XP_002284772.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 282
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 140/226 (61%), Gaps = 7/226 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 56 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVGALRPVT 115
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 116 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNP 175
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 176 ATPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRICAEKGVNPWIEVDGG 235
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V N +++AGA+ LV GS+ F K YA+ + +K S +
Sbjct: 236 VGPANAYKVIEAGANALVAGSAVFGAKD---YAEAIKGIKTSKRPV 278
>gi|332518973|ref|ZP_08395440.1| ribulose-phosphate 3-epimerase [Lacinutrix algicola 5H-3-7-4]
gi|332044821|gb|EGI81014.1| ribulose-phosphate 3-epimerase [Lacinutrix algicola 5H-3-7-4]
Length = 220
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 3/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PS+LAADF L + + + A H DVMDG FVPNIS+G VI++++ +
Sbjct: 1 MSKKL-IAPSMLAADFGNLQRDTEMVNNSDADWFHIDVMDGHFVPNISYGMPVIQAIKKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + +I A G DIIT H ES+ H+ R+LR I G K GV +N
Sbjct: 60 ATKPLDVHLMIEKPERYIEEFAKVGADIITVHHESTVHLHRTLRQIKDAGCKAGVVLNIT 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++LED++ E M+L+M++NPGFGGQ+ T +I++ + +I ++ + +E+DGGV
Sbjct: 120 TPVSVLEDILPECYMVLLMSINPGFGGQKFENVTYQRIKKLRKMIDEQGLDTKIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
T +NIK LV+AGAD+ V GS F + K L L S
Sbjct: 180 TDKNIKQLVEAGADVFVAGSHVFKSSNQPDTIKNLKALANS 220
>gi|20807941|ref|NP_623112.1| Pentose-5-phosphate-3-epimerase [Thermoanaerobacter tengcongensis
MB4]
gi|20516511|gb|AAM24716.1| Pentose-5-phosphate-3-epimerase [Thermoanaerobacter tengcongensis
MB4]
Length = 216
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 140/213 (65%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +++ I + A +H DVMDG FVPNI+ G+ V+++LR Y+
Sbjct: 1 MKIAPSILSADFANLLQDVKEIEE-DADLLHIDVMDGHFVPNITIGSVVVKALRQYTSLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I AG DIIT H E+ H+ R+++ I K GVA+NP TP+
Sbjct: 60 FDVHLMIENPDLYIEDFVKAGADIITVHQEACVHLHRTIQRIKGHEVKAGVALNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
L+ +++ +D++L+MTVNPGFGGQ+ I+S + KI++ + + ++ +EVDGG+ +N
Sbjct: 120 TLKYILEYVDLVLVMTVNPGFGGQKFIDSMLKKIKELDEMRKEMNLSFEIEVDGGINIKN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK +V+AGAD++V GS+ F S K +
Sbjct: 180 IKQVVEAGADIIVAGSAIFESPDPSSTIKEFRE 212
>gi|325576670|ref|ZP_08147357.1| ribulose-phosphate 3-epimerase [Haemophilus parainfluenzae ATCC
33392]
gi|325161117|gb|EGC73233.1| ribulose-phosphate 3-epimerase [Haemophilus parainfluenzae ATCC
33392]
Length = 223
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GIKAPIDVHLMVKPVDRIIPDFAKAGADYITFHPEASEHIDRSLQLIREHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ + ST+ K++QA+ LI + + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVILLMSVNPGFGGQSFLPSTLKKLQQARRLIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKVNNIAEIAAAGADMFVAGSAIFGKPD---YKQIIDQMRAQLASV 222
>gi|251793625|ref|YP_003008355.1| ribulose-phosphate 3-epimerase [Aggregatibacter aphrophilus NJ8700]
gi|247535022|gb|ACS98268.1| ribulose-phosphate 3-epimerase [Aggregatibacter aphrophilus NJ8700]
Length = 224
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 150/226 (66%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ N+ K G IHFDVMD +VPN++FG V ++LR+Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVENVLKCGGDVIHFDVMDNHYVPNLTFGPAVCKALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPE+S HI R+L+ + G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPEASEHIDRTLQLLRDNGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++Q + I + + + EVDGG
Sbjct: 120 ATPLSYLDYVMDKVDVILLMSVNPGFGGQSFIPATLDKLKQVRKRIDESGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + +AGAD+ V GS+ F+Q Y K ++++++ A+
Sbjct: 180 VKVSNIAEIARAGADMFVAGSAIFDQPD---YKKVIDEMRQQLAAV 222
>gi|294669711|ref|ZP_06734778.1| hypothetical protein NEIELOOT_01612 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308624|gb|EFE49867.1| hypothetical protein NEIELOOT_01612 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 237
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I PSIL+ADF+RLGEE+ ++ +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 11 MQKFRIAPSILSADFARLGEEVGSVVEAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYA 70
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ +D I A AG DIITFHPE+S H+ RSL I G + G+ +NP T
Sbjct: 71 SVPVDVHLMVEPVDDLIVAFAKAGADIITFHPEASRHVDRSLSLIREHGCQAGLVLNPAT 130
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
V++LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +AL+ + R I+LEVD
Sbjct: 131 SVSVLENVLDRLDMVLLMSVNPGFGGQGFIPHTLEKIRRTRALLDEYQAAAGRRIALEVD 190
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
GG+ NI + AGAD V GS+ F Q + ++ +L KSA
Sbjct: 191 GGIKVGNIAEVAAAGADTFVAGSAIFGQPDYKAVIGQMRAELAKSA 236
>gi|212709410|ref|ZP_03317538.1| hypothetical protein PROVALCAL_00449 [Providencia alcalifaciens DSM
30120]
gi|212687925|gb|EEB47453.1| hypothetical protein PROVALCAL_00449 [Providencia alcalifaciens DSM
30120]
Length = 224
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 141/225 (62%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA IHFDVMD +VPN++FGA + ++LR+Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDTAKVLAAGADIIHFDVMDNHYVPNLTFGAPICKALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG I+FHPE+S HI R+L+ I G G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGATHISFHPEASEHIDRTLQLIKENGCTAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++DMIL+M+VNPGFGGQ I T+ K+RQ + LI + + EVDGGV
Sbjct: 121 TPLSYLDYVMDKVDMILLMSVNPGFGGQSFIPQTLNKLRQVRKLIDESGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD V GS+ F + Y K ++++++ +
Sbjct: 181 KVNNIAEIAAAGADTFVAGSAIF---DQSDYKKVIDEMRQELKKV 222
>gi|197106962|ref|YP_002132339.1| ribulose-phosphate 3-epimerase [Phenylobacterium zucineum HLK1]
gi|196480382|gb|ACG79910.1| ribulose-phosphate 3-epimerase [Phenylobacterium zucineum HLK1]
Length = 219
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 135/219 (61%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSILA+DFSRLGEE+ I AGA +H DVMDG FVPNI+ G DV+++LR +
Sbjct: 1 MAARTIIAPSILASDFSRLGEEVRAIEAAGADWVHVDVMDGHFVPNITIGPDVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMI+ D ++ AG DII+ HPE+ PH+ R+L+ I +G K GV +NP
Sbjct: 61 AKIPFDVHLMIAPADPYLEGFRAAGADIISVHPEAGPHLHRTLKRIRELGAKAGVVLNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T LE ++++ID++L+M+VNPGFGGQ I + K+ + + +I + EVDGGV
Sbjct: 121 TDPGPLEWILEDIDLVLVMSVNPGFGGQSFIPGQLRKVERLRRMIDAAGADIILEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
T + AGA LV GS+ F G YA + L+
Sbjct: 181 TPETAPRCIAAGATALVAGSAVFKG-GPDRYAANIAALR 218
>gi|237744726|ref|ZP_04575207.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 7_1]
gi|260494591|ref|ZP_05814721.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_33]
gi|229431955|gb|EEO42167.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 7_1]
gi|260197753|gb|EEW95270.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_33]
Length = 215
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 145/220 (65%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL++DFS+LGEE+ I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MINGIKIAPSILSSDFSKLGEEVVAIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDKPERYIENFVKAGADIVVVHSESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RTDIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ +Y +R+N LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----NYKERINLLKLKA 214
>gi|300721140|ref|YP_003710408.1| D-ribulose-5-phosphate 3-epimerase [Xenorhabdus nematophila ATCC
19061]
gi|297627625|emb|CBJ88146.1| D-ribulose-5-phosphate 3-epimerase [Xenorhabdus nematophila ATCC
19061]
Length = 224
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 137/220 (62%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKQDFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRHY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 61 GITAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHIDRTLQLIREHGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I + EVDGG
Sbjct: 121 ATPLRYLDYVLDKLDVILLMSVNPGFGGQSFIPETLKKLRQVRKIIDDSGYDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ NI QAGAD+ V GS+ F+Q Y +++++
Sbjct: 181 IKPSNIAEAAQAGADMFVAGSAIFSQPD---YKAVIDEMR 217
>gi|254436914|ref|ZP_05050408.1| ribulose-phosphate 3-epimerase [Octadecabacter antarcticus 307]
gi|198252360|gb|EDY76674.1| ribulose-phosphate 3-epimerase [Octadecabacter antarcticus 307]
Length = 276
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 99/224 (44%), Positives = 144/224 (64%), Gaps = 3/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ LG EI I GA IH D MDG FVPN++ G +V+ ++R +
Sbjct: 52 RSIKIAPSILSADFANLGAEIQAIEAQGADWIHVDPMDGHFVPNLTIGPNVVAAIRPHVT 111
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLMIS D +I A AG D+IT H E+ PH+ RSL+++ A GK GVA+N TP
Sbjct: 112 TFMDVHLMISPADPYIGAFAKAGSDMITVHAEAGPHLHRSLQSVRAEGKMAGVALNMTTP 171
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + D++D+IDMILIMT+NPGFGGQ+ + I K+ + +A+IG R I ++VDGG+ S
Sbjct: 172 LDHVVDILDDIDMILIMTINPGFGGQKFTHAMIDKVARCRAMIGDRPIHIQVDGGIDSTT 231
Query: 183 IKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKKSALAI 223
+ +AGA++LV GS+ F Y + ++ +A ++
Sbjct: 232 APLVAKAGANVLVAGSAVFRGGSVAQPDVYGDNIRAIRDAAQSV 275
>gi|323138372|ref|ZP_08073442.1| ribulose-phosphate 3-epimerase [Methylocystis sp. ATCC 49242]
gi|322396319|gb|EFX98850.1| ribulose-phosphate 3-epimerase [Methylocystis sp. ATCC 49242]
Length = 226
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 113/209 (54%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF++LGEE + AGA IH DVMDG FVPNI+FG V+ +LR ++
Sbjct: 4 ILIAPSILSADFAKLGEETRAMEAAGADWIHLDVMDGHFVPNITFGPAVVAALRPHTTLS 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMIS ID +I ADAG DIIT H E PH+ RSL+ I A GKK GV++NP T +
Sbjct: 64 LDVHLMISPIDPYIGAFADAGADIITVHAEGGPHLHRSLQAIRARGKKAGVSLNPATHES 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ V+DEID++L+M+VNPGFGGQ I S + KIR + +IG+R I LEVDGGVT +
Sbjct: 124 ALQYVLDEIDLVLVMSVNPGFGGQSFIPSQLEKIRAIREMIGRRPIRLEVDGGVTPQTAT 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++V+AGAD LV GS+ F G +YA +
Sbjct: 184 AIVEAGADALVAGSAAFRG-GPSAYAGNI 211
>gi|194098682|ref|YP_002001744.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
NCCP11945]
gi|239998990|ref|ZP_04718914.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
35/02]
gi|240014100|ref|ZP_04721013.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
DGI18]
gi|240016535|ref|ZP_04723075.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
FA6140]
gi|240080659|ref|ZP_04725202.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
FA19]
gi|240112976|ref|ZP_04727466.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
MS11]
gi|240115730|ref|ZP_04729792.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
PID18]
gi|240118026|ref|ZP_04732088.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
PID1]
gi|240121662|ref|ZP_04734624.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
PID24-1]
gi|240123580|ref|ZP_04736536.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
PID332]
gi|240125762|ref|ZP_04738648.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
SK-92-679]
gi|240128284|ref|ZP_04740945.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
SK-93-1035]
gi|254493781|ref|ZP_05106952.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae 1291]
gi|260440458|ref|ZP_05794274.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
DGI2]
gi|268594838|ref|ZP_06129005.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae 35/02]
gi|268596782|ref|ZP_06130949.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae FA19]
gi|268599056|ref|ZP_06133223.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae MS11]
gi|268601409|ref|ZP_06135576.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID18]
gi|268603740|ref|ZP_06137907.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID1]
gi|268682209|ref|ZP_06149071.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID332]
gi|268684360|ref|ZP_06151222.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae SK-92-679]
gi|268686681|ref|ZP_06153543.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae SK-93-1035]
gi|291043757|ref|ZP_06569473.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae DGI2]
gi|293399042|ref|ZP_06643207.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae F62]
gi|193933972|gb|ACF29796.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
NCCP11945]
gi|226512821|gb|EEH62166.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae 1291]
gi|268548227|gb|EEZ43645.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae 35/02]
gi|268550570|gb|EEZ45589.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae FA19]
gi|268583187|gb|EEZ47863.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae MS11]
gi|268585540|gb|EEZ50216.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID18]
gi|268587871|gb|EEZ52547.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID1]
gi|268622493|gb|EEZ54893.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae PID332]
gi|268624644|gb|EEZ57044.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae SK-92-679]
gi|268626965|gb|EEZ59365.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae SK-93-1035]
gi|291012220|gb|EFE04209.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae DGI2]
gi|291610456|gb|EFF39566.1| ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae F62]
gi|317164282|gb|ADV07823.1| putative ribulose-phosphate 3-epimerase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 227
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 153/227 (67%), Gaps = 8/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-AYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EV
Sbjct: 120 TPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEGKSGRRIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
DGG+ + NI ++ +AGAD V GS+ F + + + +L+K+A
Sbjct: 180 DGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIAAMRAELEKAA 226
>gi|251787914|ref|YP_003002635.1| ribulose-phosphate 3-epimerase [Dickeya zeae Ech1591]
gi|247536535|gb|ACT05156.1| ribulose-phosphate 3-epimerase [Dickeya zeae Ech1591]
Length = 225
Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 144/226 (63%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V++SLR+Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTARVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE+S H+ R+L+ I + G K G+ NP
Sbjct: 60 GITAPVDVHLMVKPVDRLIPDFAEAGASFITFHPEASEHVDRTLQLIKSHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
T ++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + + EVDGG
Sbjct: 120 ATSLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRRIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F Q Y ++ +++ A+
Sbjct: 180 VKVDNIAQIAAAGADMFVAGSAIFGQPD---YRAVIDSMRQELKAV 222
>gi|330980946|gb|EGH79049.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 224
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 105/220 (47%), Positives = 145/220 (65%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI+ + AGAD V GS+ FN Y + ++ ++
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPD---YREVIDKMR 216
>gi|282877777|ref|ZP_06286590.1| ribulose-phosphate 3-epimerase [Prevotella buccalis ATCC 35310]
gi|281300093|gb|EFA92449.1| ribulose-phosphate 3-epimerase [Prevotella buccalis ATCC 35310]
Length = 230
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 136/220 (61%), Gaps = 2/220 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PS+L+ADF+ L ++ I ++ A +H DVMDG FVPNISFG VI ++
Sbjct: 1 MKNILISPSLLSADFTNLKSDVEMINRSEADWLHMDVMDGVFVPNISFGFPVISAVSKIC 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + +I A AG I++ E+ H+ R+++ IHA G K GV +NP T
Sbjct: 61 KKPLDVHLMIVQPERYIEQTAKAGAYIMSVQYEACTHLHRTIQQIHAAGMKAGVVLNPST 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV +LED+I ++D++L+M+VNPGFGGQ IE+TI K+++ + L+ + +EVDGGV
Sbjct: 121 PVHLLEDIICDVDLVLLMSVNPGFGGQTFIENTINKVKRLRKLMDECGSKALIEVDGGVQ 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
LVQAGAD+LV GS F + + K+L L S
Sbjct: 181 GETAPRLVQAGADVLVSGSYVFKSEDPENTIKQLKSLSTS 220
>gi|291280493|ref|YP_003497328.1| ribulose-phosphate 3-epimerase [Deferribacter desulfuricans SSM1]
gi|290755195|dbj|BAI81572.1| ribulose-phosphate 3-epimerase [Deferribacter desulfuricans SSM1]
Length = 212
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 141/215 (65%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADFSRLGEEI + KAGA IH DVMDG FVPNI+ G V++S+R +
Sbjct: 1 MIIAPSILSADFSRLGEEIKLVEKAGADWIHIDVMDGRFVPNITIGPVVVKSIRKVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I AG DIIT H E++ H+ R + I +G K GV+INP T ++
Sbjct: 61 FDAHLMIVEPEKYIEDFVKAGADIITVHVEATNHLHRLVENIKMLGAKAGVSINPATSLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+E+++ +DMIL+M+VNPGFGGQ+ IE+++ KI++ K +I + I +EVDGGV N
Sbjct: 121 TIEEILPFVDMILVMSVNPGFGGQKFIETSLQKIKRLKEMIKNIGKDILIEVDGGVNDSN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K L AG D+LV GS F Y ++++ LK
Sbjct: 181 AKLLRDAGCDVLVAGSYIFGSDN---YKEKIDSLK 212
>gi|310642733|ref|YP_003947491.1| had-superfamily hydrolase, subfamily iib [Paenibacillus polymyxa
SC2]
gi|309247683|gb|ADO57250.1| HAD-superfamily hydrolase, subfamily IIB [Paenibacillus polymyxa
SC2]
Length = 222
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 130/214 (60%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLG E++ + AGA IH DVMDG FV NI+ G +++++R ++
Sbjct: 2 LKIAPSILSADFARLGSEVAEVQAAGADWIHVDVMDGHFVSNITLGPPIVQAIRPHTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG +IIT H E+ H+ + I G GVA+NP T
Sbjct: 62 LDVHLMIEQPERYIGDFVKAGANIITVHAEACVHLHGVIHLIKQQGALAGVALNPGTSPY 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTSR 181
+++V+ +DMIL+MTVNPGFGGQ I T+ KIRQ +A + + + +EVDGG+
Sbjct: 122 AIKEVLPNVDMILVMTVNPGFGGQSFIPETLNKIRQIRAWLNELGRPDVHIEVDGGIAEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ +AGAD+LV GS+ + + + + D
Sbjct: 182 TAPAVFEAGADVLVAGSAVYGRADRAAAITAIRD 215
>gi|69245432|ref|ZP_00603427.1| Ribulose-phosphate 3-epimerase [Enterococcus faecium DO]
gi|257879843|ref|ZP_05659496.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,230,933]
gi|257886033|ref|ZP_05665686.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,501]
gi|257891684|ref|ZP_05671337.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,410]
gi|257894159|ref|ZP_05673812.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,408]
gi|258614270|ref|ZP_05712040.1| ribulose-phosphate 3-epimerase [Enterococcus faecium DO]
gi|260559516|ref|ZP_05831697.1| ribulose-phosphate 3-epimerase [Enterococcus faecium C68]
gi|261206667|ref|ZP_05921365.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TC 6]
gi|289565028|ref|ZP_06445482.1| ribulose-phosphate 3-epimerase [Enterococcus faecium D344SRF]
gi|293563690|ref|ZP_06678131.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1162]
gi|293570102|ref|ZP_06681182.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1071]
gi|294614912|ref|ZP_06694803.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1636]
gi|294618616|ref|ZP_06698155.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1679]
gi|314938226|ref|ZP_07845526.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133a04]
gi|314943123|ref|ZP_07849921.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133C]
gi|314949320|ref|ZP_07852662.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0082]
gi|314952254|ref|ZP_07855268.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133A]
gi|314992110|ref|ZP_07857560.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133B]
gi|314996292|ref|ZP_07861348.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133a01]
gi|68195814|gb|EAN10250.1| Ribulose-phosphate 3-epimerase [Enterococcus faecium DO]
gi|257814071|gb|EEV42829.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,230,933]
gi|257821889|gb|EEV49019.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,501]
gi|257828044|gb|EEV54670.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,410]
gi|257830538|gb|EEV57145.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,408]
gi|260074615|gb|EEW62936.1| ribulose-phosphate 3-epimerase [Enterococcus faecium C68]
gi|260079160|gb|EEW66853.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TC 6]
gi|289163235|gb|EFD11081.1| ribulose-phosphate 3-epimerase [Enterococcus faecium D344SRF]
gi|291587474|gb|EFF19358.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1071]
gi|291592198|gb|EFF23816.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1636]
gi|291595135|gb|EFF26473.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1679]
gi|291604374|gb|EFF33867.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1162]
gi|313589536|gb|EFR68381.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133a01]
gi|313593324|gb|EFR72169.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133B]
gi|313595596|gb|EFR74441.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133A]
gi|313598131|gb|EFR76976.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133C]
gi|313642422|gb|EFS07002.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0133a04]
gi|313644269|gb|EFS08849.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX0082]
Length = 216
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + + ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKITELADLRRENNWTYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|262066607|ref|ZP_06026219.1| ribulose-phosphate 3-epimerase [Fusobacterium periodonticum ATCC
33693]
gi|291379671|gb|EFE87189.1| ribulose-phosphate 3-epimerase [Fusobacterium periodonticum ATCC
33693]
Length = 215
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 144/220 (65%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA IH DVMDG FVPN++FG VI+ +R
Sbjct: 1 MTKGIKIAPSILSSDFSKLGEELVAIDKAGADYIHIDVMDGEFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I A+G K GV++NP
Sbjct: 61 TELVFDVHLMIDRPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKALGVKVGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + I +EVDGG+T
Sbjct: 121 TSEDVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKMRA--DIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ Y +R++ LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----DYKERIDLLKAKA 214
>gi|296314236|ref|ZP_06864177.1| ribulose-phosphate 3-epimerase [Neisseria polysaccharea ATCC 43768]
gi|296839031|gb|EFH22969.1| ribulose-phosphate 3-epimerase [Neisseria polysaccharea ATCC 43768]
Length = 227
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 150/227 (66%), Gaps = 8/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-TYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG------KRSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ R I++EV
Sbjct: 120 TPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDCYEEKSGRRIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
DGG+ + NI ++ +AGAD V GS+ F + + + +LKK A
Sbjct: 180 DGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELKKVA 226
>gi|253987551|ref|YP_003038907.1| ribulose-phosphate 3-epimerase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779001|emb|CAQ82161.1| ribulose-phosphate 3-epimerase [Photorhabdus asymbiotica]
Length = 230
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 139/221 (62%), Gaps = 6/221 (2%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M ++ I PSIL+ADF+RLG + + + AGA +HFDVMD +VPN++FG V ++L
Sbjct: 1 MEKIMKDFLIAPSILSADFARLGADTAEVLAAGADVVHFDVMDNHYVPNLTFGPMVCQAL 60
Query: 58 RSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
R+Y + D HLM+ +D I A AG ITFHPE+S HI RSL+ I G K G+
Sbjct: 61 RNYGITAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHIDRSLQLIKEYGCKAGLV 120
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EV 174
NP TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I K + EV
Sbjct: 121 FNPATPLSYLDYVLDKLDVILLMSVNPGFGGQSFIPRTLDKLRQVRKIIDKSGYDIRLEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGG+ + NI +AGAD+ V GS+ F+Q + +
Sbjct: 181 DGGIKTSNIAQAAEAGADMFVAGSAIFSQSDYKTVIDNMRS 221
>gi|15677116|ref|NP_274268.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis MC58]
gi|254805024|ref|YP_003083245.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis alpha14]
gi|304387494|ref|ZP_07369683.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis ATCC 13091]
gi|7226484|gb|AAF41625.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis MC58]
gi|254668566|emb|CBA06051.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis alpha14]
gi|254670096|emb|CBA05016.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis alpha153]
gi|254673910|emb|CBA09694.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis alpha275]
gi|304338381|gb|EFM04502.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis ATCC 13091]
gi|325128350|gb|EGC51234.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis N1568]
gi|325140526|gb|EGC63047.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis CU385]
gi|325144611|gb|EGC66910.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M01-240013]
gi|325204228|gb|ADY99681.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M01-240355]
gi|325205979|gb|ADZ01432.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M04-240196]
gi|325208184|gb|ADZ03636.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis NZ-05/33]
Length = 242
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 151/226 (66%), Gaps = 8/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-TYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ + R I++EV
Sbjct: 120 TPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
DGG+ + NI ++ +AGAD V GS+ F + + + +L+KS
Sbjct: 180 DGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKS 225
>gi|257882569|ref|ZP_05662222.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,502]
gi|294623692|ref|ZP_06702525.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
gi|257818227|gb|EEV45555.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,502]
gi|291596907|gb|EFF28125.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
Length = 216
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGRFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + + ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKITELADLRRENNWTYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|192361209|ref|YP_001983126.1| ribulose-phosphate 3-epimerase [Cellvibrio japonicus Ueda107]
gi|190687374|gb|ACE85052.1| ribulose-phosphate 3-epimerase [Cellvibrio japonicus Ueda107]
Length = 233
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 147/221 (66%), Gaps = 6/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I PSIL+ADF+RLGEE+S + AGA IHFDVMD +VPN++FG V ++LR+Y
Sbjct: 12 KRDFKIAPSILSADFARLGEEVSAVLAAGADIIHFDVMDNHYVPNLTFGPMVCKALRNYG 71
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I ADAG ITFHPE+S H+ RSL+ I G K G+ +NP
Sbjct: 72 ITAPIDVHLMVEPVDDLIVQFADAGATYITFHPEASRHLDRSLQLIKGKGCKAGLVLNPA 131
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
+ + ++ V++++DM+L+M+VNPGFGGQQ I + K+R+A+ALI + + + EVDGGV
Sbjct: 132 SSLEQIKYVLEKLDMLLLMSVNPGFGGQQFIPYVLDKLREARALIDRSGLPIRLEVDGGV 191
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI+++ +AGAD V GS+ F + YA+ + +++
Sbjct: 192 GLSNIRAVAEAGADTFVAGSAIFGAED---YAQVIREMRAQ 229
>gi|320355023|ref|YP_004196362.1| ribulose-5-phosphate 3-epimerase [Desulfobulbus propionicus DSM
2032]
gi|320123525|gb|ADW19071.1| ribulose-5-phosphate 3-epimerase [Desulfobulbus propionicus DSM
2032]
Length = 244
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 131/216 (60%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S I PSIL+ADFSRLG+EI + AGA IH DVMDG FVPNI+ G ++++ R+ +
Sbjct: 25 MRSTMIAPSILSADFSRLGDEIRAVEAAGADVIHVDVMDGHFVPNITIGPLIVKAARAAT 84
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI+ D ++ DAG D +T H E+ H+ R+L I A GKK G +NP T
Sbjct: 85 TLPLDVHLMITDPDRYLQDFIDAGADWVTVHVEACTHLHRTLSFIRARGKKAGAVLNPAT 144
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
+ LE V+ E+D++++M+VNPGFGGQ IES++ KI + + ++ +EVDGG++
Sbjct: 145 SLTTLEYVLAEVDLVMLMSVNPGFGGQSFIESSLDKIARLRRMLDAVNPEAGIEVDGGIS 204
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + AGA++ V GS+ + + + +
Sbjct: 205 PATIGRVADAGANIFVAGSAIYGHDDYQAAIHTMKE 240
>gi|227891997|ref|ZP_04009802.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius ATCC
11741]
gi|227866201|gb|EEJ73622.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius ATCC
11741]
Length = 215
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 138/216 (63%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ + AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADMLNLGADVQKVEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PH+ R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHLHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K + GA + V GS FN E A+R+N L+
Sbjct: 181 VKLCRETGATVAVAGSYVFNSGNETH-AERINKLRN 215
>gi|164687795|ref|ZP_02211823.1| hypothetical protein CLOBAR_01439 [Clostridium bartlettii DSM
16795]
gi|164603070|gb|EDQ96535.1| hypothetical protein CLOBAR_01439 [Clostridium bartlettii DSM
16795]
Length = 218
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 144/213 (67%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+RL E++ + KAG + +H DVMDG FVPNI+ G +++SLR + V
Sbjct: 2 IKLAPSILSADFARLLEDVKKVEKAGCEYLHIDVMDGHFVPNITLGPGIVKSLRKDVNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D++I ADAGCDII H E+ H+ R+++ I + G K GVA+NP TP+
Sbjct: 62 FDAHLMIENPDNYIKEFADAGCDIIVVHQEACTHLHRTIQNIKSHGIKAGVALNPATPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+ ++DM+L+M+VNPGFGGQ I KI++ KALI K + I +EVDGGV N
Sbjct: 122 TIKYVLQDVDMVLLMSVNPGFGGQSYIPVVTEKIKELKALIDKMNLDIDIEVDGGVKPSN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +V AGA+++V GS+ FN K L +
Sbjct: 182 IAEVVNAGANVIVAGSAIFNAGNIDEAVKSLRE 214
>gi|89094165|ref|ZP_01167108.1| ribulose-phosphate 3-epimerase [Oceanospirillum sp. MED92]
gi|89081640|gb|EAR60869.1| ribulose-phosphate 3-epimerase [Oceanospirillum sp. MED92]
Length = 224
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 99/217 (45%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P +I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MPDFKIAPSILSADFARLGEEVENVLSAGADIVHFDVMDNHYVPNLTIGPMVCSALRKHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I +AG ITFHPE S HI RSL+ I G K+G+ NP
Sbjct: 61 IQAPIDVHLMVKPVDRLIGDFIEAGASYITFHPEGSEHIDRSLQMIRDGGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ LE V+D++DM+L+M+VNPGFGGQ+ I T+ K+RQA+ +I + + E+DGGV
Sbjct: 121 TPLSHLEYVLDKVDMVLLMSVNPGFGGQKFIPGTLDKLRQARKIIDESGYDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIK + +AGAD V GS+ FN ++ +
Sbjct: 181 GVGNIKEIAEAGADTFVAGSAIFNTDDYADTIAQMRE 217
>gi|84390814|ref|ZP_00991506.1| ribulose-phosphate 3-epimerase [Vibrio splendidus 12B01]
gi|84376617|gb|EAP93494.1| ribulose-phosphate 3-epimerase [Vibrio splendidus 12B01]
Length = 224
Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDSIVPEFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI + R I LE+DGGV
Sbjct: 121 TPLSCLDYILDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+ + +AGAD+ V GS+ FNQ Y + +++++ ++
Sbjct: 181 NVDNIREIAEAGADMFVAGSAIFNQPD---YKEVIDEMRAELAKVN 223
>gi|330891213|gb|EGH23874.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. mori str.
301020]
Length = 224
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 105/225 (46%), Positives = 144/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN ++ ++ A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIAKMRAELAASRA 224
>gi|297617054|ref|YP_003702213.1| ribulose-phosphate 3-epimerase [Syntrophothermus lipocalidus DSM
12680]
gi|297144891|gb|ADI01648.1| ribulose-phosphate 3-epimerase [Syntrophothermus lipocalidus DSM
12680]
Length = 218
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+A+F+ L E+ + KAGA +H DVMDG FVPN++ G V++ LR + +
Sbjct: 2 ILIAPSILSANFAHLAREVKVVEKAGADWLHVDVMDGHFVPNLTIGPQVVKDLRQETGLL 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D ++ AG DIIT H E+S H+ R++ I ++G G+A+NP TP+
Sbjct: 62 FDVHLMIDNPDDYVQAFYQAGADIITVHAEASVHLHRTVSNIKSLGIMAGIALNPATPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+ ++ E+D++LIM+VNPGFGGQ+ I+ + KI + ++ +R + ++VDGG+ +
Sbjct: 122 VLDFILGEVDLVLIMSVNPGFGGQEFIQESTRKISMLRQMLNERGLKAYIQVDGGINAAT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
VQ+GAD+LV GS F L +
Sbjct: 182 AALCVQSGADVLVAGSYIFKSPEPEKAILTLKE 214
>gi|256026521|ref|ZP_05440355.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D11]
gi|289764534|ref|ZP_06523912.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D11]
gi|289716089|gb|EFD80101.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D11]
Length = 215
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL++DFS+LGEE+ +I KAGA +H DVMDG FVPN++FG VI+ +R
Sbjct: 1 MINGIKIAPSILSSDFSKLGEEVIDIDKAGADYVHIDVMDGQFVPNLTFGPPVIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDKPERYIEDFVKAGADIVVVHSESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFIPAVVEKIKAIKKM--RTDIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK AGA++ V GS F+ +Y +R+N LK A
Sbjct: 179 ETIKVCADAGANIFVAGSYVFSG----NYKERINLLKLKA 214
>gi|237741656|ref|ZP_04572137.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 4_1_13]
gi|256844980|ref|ZP_05550438.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_36A2]
gi|294785733|ref|ZP_06751021.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_27]
gi|229429304|gb|EEO39516.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 4_1_13]
gi|256718539|gb|EEU32094.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_36A2]
gi|294487447|gb|EFG34809.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_27]
Length = 215
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSIL++DFS+LGEE+ I KAGA +H DVMDG FVPN++FG +I+ +R
Sbjct: 1 MTNGIKIAPSILSSDFSKLGEEVVAIDKAGADYVHIDVMDGQFVPNLTFGPPIIKCIRKC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ VFD HLMI + +I AG DI+ H ES+ H+ R ++ I + G K GV++NP
Sbjct: 61 TELVFDVHLMIDKPERYIEDFVKAGADIVVVHAESTIHLHRVIQQIKSFGVKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +L+ VI++IDM+L+M+VNPGFGGQ+ I + + KI+ K + I +EVDGG+T
Sbjct: 121 TPEEVLKYVINDIDMVLVMSVNPGFGGQKFISAVVEKIKAIKKMRA--DIDIEVDGGITD 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK V AGA++ V GS F+ +Y +R++ LK A
Sbjct: 179 ETIKVCVDAGANIFVAGSYVFSG----NYKERIDLLKIKA 214
>gi|54307505|ref|YP_128525.1| ribulose-phosphate 3-epimerase [Photobacterium profundum SS9]
gi|46911925|emb|CAG18723.1| putative ribulose-phosphate 3-epimerase [Photobacterium profundum
SS9]
Length = 220
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 94/222 (42%), Positives = 143/222 (64%), Gaps = 6/222 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y +
Sbjct: 1 MIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYGITAP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG +ITFH E++ H+ R+L+ I G + GV NP TP+
Sbjct: 61 IDVHLMVKPVDRIIPDFAKAGATMITFHAEATEHLDRTLQLIKECGCQAGVVFNPATPLH 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
L+ V+D++DMIL+M+VNPGFGGQ I +T+ K+R+ + I + E+DGGV + N
Sbjct: 121 HLDYVMDKVDMILLMSVNPGFGGQSFIPNTLDKLREVRQRIDASGYDIRLEIDGGVKADN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
I+ + +AGAD+ V GS+ FNQ Y +++++ ++
Sbjct: 181 IREIAEAGADMFVAGSAIFNQPD---YKAAIDEMRAELAKVE 219
>gi|116782122|gb|ABK22378.1| unknown [Picea sitchensis]
Length = 292
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 139/219 (63%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F+ LGE++ + AG +H DVMDG FVPNI+ G V+ +LR +D
Sbjct: 69 IIVSPSILSANFATLGEQVKAVELAGCDWVHVDVMDGRFVPNITIGPLVVAALRPVTDLP 128
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D + AG DI++ H E S+ H+ R++ I ++G K GV +NP TP
Sbjct: 129 LDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATP 188
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + +R ++ +EVDGGVT
Sbjct: 189 LSCIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRMCAERGVNPWIEVDGGVTP 248
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++AGA+ LV GS+ F K YA+ + +K S
Sbjct: 249 SNAYKVIEAGANALVAGSAVFGAKD---YAEAIKGIKTS 284
>gi|50083912|ref|YP_045422.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter sp. ADP1]
gi|49529888|emb|CAG67600.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter sp. ADP1]
Length = 228
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 103/222 (46%), Positives = 148/222 (66%), Gaps = 4/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + +AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVERVLEAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I DAG DIITFHPE++ HI RSL+ I A G K G+ NP
Sbjct: 61 GIQAPIDVHLMVSPVDRMIGDFLDAGADIITFHPEATDHIDRSLQLIKAGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ +I + + EVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLRQARKMIDASGLDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKK 218
V NI+ + +AGAD+ V GS+ F + + + +L K
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGKPDYKAVIDEMRVELAK 222
>gi|229592939|ref|YP_002875058.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens SBW25]
gi|229364805|emb|CAY52822.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens SBW25]
Length = 224
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 107/225 (47%), Positives = 146/225 (64%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDKVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I DAG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITAPIDAHLMVSPVDRIIGDFVDAGATYITFHPEASLHVDRTLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+++LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLSVLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V +NI+ + AGAD V GS+ FN ++ + ALA
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFNAPDYQEVIDKMR--AELALA 222
>gi|304320156|ref|YP_003853799.1| ribulose-phosphate 3-epimerase [Parvularcula bermudensis HTCC2503]
gi|303299059|gb|ADM08658.1| ribulose-phosphate 3-epimerase [Parvularcula bermudensis HTCC2503]
Length = 245
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 149/220 (67%), Gaps = 3/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ I PSIL+ADF++LG+E+ IT+AGA IH DVMDG FVPNI+ G V+++LR +S
Sbjct: 22 MPTPLISPSILSADFAQLGQEVRAITEAGADMIHVDVMDGHFVPNITIGPSVVKALRPHS 81
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLMI+ +D ++ A AG I++ HPE+ PH+ RSL+TI +G K G+A+NP T
Sbjct: 82 SLPFDVHLMIAPVDPYLEAFAKAGASILSIHPEAGPHLHRSLQTIRQLGVKPGLALNPAT 141
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ + V+DEID+IL+M+VNPGFGGQ+ I+ + +I + + ++ R I++EVDGG+T
Sbjct: 142 PLETVTPVLDEIDLILVMSVNPGFGGQKFIDGQLARIERLRRMVDATGRDITIEVDGGIT 201
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ ++ AGA LV G++ F G SY + LK +
Sbjct: 202 PETARRVLDAGATALVAGTAVFK-DGPDSYRANIAALKAA 240
>gi|304404149|ref|ZP_07385811.1| ribulose-phosphate 3-epimerase [Paenibacillus curdlanolyticus YK9]
gi|304347127|gb|EFM12959.1| ribulose-phosphate 3-epimerase [Paenibacillus curdlanolyticus YK9]
Length = 214
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 90/200 (45%), Positives = 131/200 (65%), Gaps = 3/200 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+A+FS+LGE++ + KAG IH DVMDG FVPN++FG V+ S+R Y+ F
Sbjct: 3 IIAPSILSANFSKLGEDVQSAEKAGGDWIHIDVMDGHFVPNLTFGPIVVESVRPYTKLPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +I AG D IT H E+ H+ R + I G GVAINP TP++
Sbjct: 63 DVHLMIEKPELYIPAFVKAGADRITVHAEACVHLHRVVHLIKEHGLPAGVAINPGTPLSA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---SLEVDGGVTSRN 182
+E V+D++D++LIMTVNPGFGGQ I ++ +IRQ + ++ +R + +++VDGG+ +
Sbjct: 123 VEPVLDDLDLVLIMTVNPGFGGQSFIPQSVGRIRQLRTMLQERGLEHMNVQVDGGMNAET 182
Query: 183 IKSLVQAGADLLVVGSSFFN 202
K + AGA++LV GS +
Sbjct: 183 AKLVRDAGANVLVAGSYVYG 202
>gi|83720157|ref|YP_443414.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis E264]
gi|83653982|gb|ABC38045.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis E264]
Length = 243
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 141/229 (61%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 16 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 74
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 75 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPA 134
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D++LIM+VNPGFGGQ I + K+R A+A I R I LE+
Sbjct: 135 TPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLRAARARIDAYTARTGREIHLEI 194
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV + NI + AGAD V GS+ F + Y + + +++ + A+
Sbjct: 195 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRQVIGEMRDALAAV 240
>gi|307945572|ref|ZP_07660908.1| ribulose-phosphate 3-epimerase [Roseibium sp. TrichSKD4]
gi|307771445|gb|EFO30670.1| ribulose-phosphate 3-epimerase [Roseibium sp. TrichSKD4]
Length = 223
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 108/220 (49%), Positives = 152/220 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PSILA+DFS+LG+E+ N+ +AGA IH DVMDG FVPNI+FG DVI LR +
Sbjct: 1 MSKDVLIAPSILASDFSKLGQEVRNVVEAGADWIHLDVMDGHFVPNITFGPDVIAKLRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFD HLMI+ D ++ A AG DIIT H E+ PH+ RSL+ I +GKK GV++NP
Sbjct: 61 TDKVFDTHLMIAPCDPYLEAFAKAGSDIITVHAEAGPHLDRSLQAIRNLGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++E V+D +D++L+MTVNPGFGGQ+ I + K+++ K +IG R I +E+DGGVT
Sbjct: 121 TPENVIEYVLDRLDLVLLMTVNPGFGGQKFIHPVVEKVKRIKDMIGDRRIDIEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F SY ++ ++ +A
Sbjct: 181 ETAPLVAAAGANVLVAGSAVFKGDSVESYRTNIDAIRSAA 220
>gi|160939805|ref|ZP_02087152.1| hypothetical protein CLOBOL_04696 [Clostridium bolteae ATCC
BAA-613]
gi|158437239|gb|EDP15004.1| hypothetical protein CLOBOL_04696 [Clostridium bolteae ATCC
BAA-613]
Length = 221
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 145/215 (67%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSILAADF+RLGE++ + AGA+ +H DVMDG FVP+ISFG VI+SLR + +VF
Sbjct: 4 KLAPSILAADFTRLGEQVKEVYGAGAEYLHLDVMDGAFVPSISFGMPVIKSLRPCTRAVF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ ++ + + G DIIT E+ H+ R + I G K GVA+NP TPV
Sbjct: 64 DVHMMVEEPGRYVEDMKNCGADIITVQAEACTHLDRVVNQIKEAGLKAGVALNPATPVRS 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
LE ++ ++DM+LIMTVNPGFGGQ+ I T+ K+R+ K ++ ++ + ++VDGGV + N+
Sbjct: 124 LECILGQLDMVLIMTVNPGFGGQKFIPYTLDKVRELKNMLNEQGLKTDIQVDGGVNAGNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +++AGA++ V GS+ F + + ++ LK+
Sbjct: 184 REIIEAGANIFVAGSAVFGRDPSARTREFMDILKE 218
>gi|293553680|ref|ZP_06674304.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1039]
gi|291602255|gb|EFF32483.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1039]
Length = 216
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ V+ D +L+MTVNPGFGGQ IE T+ KI + L + + ++EVDGG+
Sbjct: 121 MIKHVLPLADQVLVMTVNPGFGGQSFIEETVEKITELADLRRENNWTYAIEVDGGIVPDT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|22127808|ref|NP_671231.1| ribulose-phosphate 3-epimerase [Yersinia pestis KIM 10]
gi|45440019|ref|NP_991558.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Microtus
str. 91001]
gi|165928023|ref|ZP_02223855.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936169|ref|ZP_02224738.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. IP275]
gi|167399079|ref|ZP_02304603.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419005|ref|ZP_02310758.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|21960939|gb|AAM87482.1|AE013998_6 D-ribulose-5-phosphate 3-epimerase [Yersinia pestis KIM 10]
gi|45434874|gb|AAS60435.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Microtus
str. 91001]
gi|165915783|gb|EDR34391.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165919972|gb|EDR37273.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|166962999|gb|EDR59020.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051583|gb|EDR62991.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
UG05-0454]
Length = 229
Score = 282 bits (721), Expect = 4e-74, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 141/227 (62%), Gaps = 7/227 (3%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M ++ I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++L
Sbjct: 1 MEKRMKKYLIAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCKAL 60
Query: 58 RSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
R Y + D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+
Sbjct: 61 RDYGITAPIDVHLMVKPVDRIVPDFAKAGATYITFHPEASEHVDRTLQLIKESGCKAGLV 120
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EV 174
NP TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EV
Sbjct: 121 FNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
DGGV NI+ + AGAD+ V GS+ FNQ + + +L +A
Sbjct: 181 DGGVKVENIRQIAAAGADMFVAGSAIFNQPDYAAVIDAMRNELAMAA 227
>gi|271502307|ref|YP_003335333.1| ribulose-phosphate 3-epimerase [Dickeya dadantii Ech586]
gi|270345862|gb|ACZ78627.1| ribulose-phosphate 3-epimerase [Dickeya dadantii Ech586]
Length = 225
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 138/218 (63%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTARALAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE+S H+ R+L+ I + G K G+ NP
Sbjct: 60 GITAPVDVHLMVKPVDRLIPDFAEAGASFITFHPEASEHVDRTLQLIKSHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
T ++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + + EVDGG
Sbjct: 120 ATSLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD+ V GS+ F Q + ++
Sbjct: 180 VKVDNIAQIAAAGADMFVAGSAIFGQPDYRAVVDKMRQ 217
>gi|255318302|ref|ZP_05359537.1| ribulose-phosphate 3-epimerase [Acinetobacter radioresistens SK82]
gi|262379047|ref|ZP_06072203.1| ribulose-phosphate 3-epimerase [Acinetobacter radioresistens SH164]
gi|255304614|gb|EET83796.1| ribulose-phosphate 3-epimerase [Acinetobacter radioresistens SK82]
gi|262298504|gb|EEY86417.1| ribulose-phosphate 3-epimerase [Acinetobacter radioresistens SH164]
Length = 228
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 102/227 (44%), Positives = 145/227 (63%), Gaps = 3/227 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE + + AGA +HFDVMD +VPN++FGA V ++L+ Y
Sbjct: 1 MSKPYLIAPSILSADFARLGENVEKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKKY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I DAG DIITFHPE+S HI RSL+ I + G + G+ NP
Sbjct: 61 GIQAPIDVHLMVSPVDRIIGDFLDAGADIITFHPEASDHIDRSLQLIKSGGAQAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQ + +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLRQVRKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI+ + +AGAD+ V GS+ F + + + +++
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGKPDYKNVIDEMRAELNKVGSVE 227
>gi|163741772|ref|ZP_02149162.1| ribulose-phosphate 3-epimerase [Phaeobacter gallaeciensis 2.10]
gi|161384945|gb|EDQ09324.1| ribulose-phosphate 3-epimerase [Phaeobacter gallaeciensis 2.10]
Length = 229
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 143/224 (63%), Gaps = 4/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RSIKIAPSILSADFANFGQEIQTIESQGADWVHIDVMDGHFVPNLTFGPMAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I A G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIDAYADAGADVLTAHIEAGPHIHRTLQAIRAAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQ+ I+ T KIR +++IG R + +E+DGGV
Sbjct: 125 AEAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-SKIRSLRSMIGDRPVHIEIDGGVDPST 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSALAI 223
+ +AGAD+LV GS+ F Y + +++ +A +
Sbjct: 184 APLVAEAGADVLVAGSAVFKGGSVNDPDVYGANIRNIRDAANGV 227
>gi|149377965|ref|ZP_01895691.1| ribulose-phosphate 3-epimerase [Marinobacter algicola DG893]
gi|149357739|gb|EDM46235.1| ribulose-phosphate 3-epimerase [Marinobacter algicola DG893]
Length = 228
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 103/218 (47%), Positives = 142/218 (65%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P QI PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNP-FQIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCEALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I + DAG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDDLIRMFIDAGASYITFHPEASNHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ ++ V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ I R+I LE+DGG
Sbjct: 120 ATPLHYIDHVMDKLDMILLMSVNPGFGGQKFIPGTLDKLREARRRIDASGRNIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V + NI+ + +AGAD V GS+ FN + +
Sbjct: 180 VKTDNIREIAEAGADTFVAGSAIFNTDDYKATIDNMRA 217
>gi|161621820|ref|YP_171630.2| ribulose-phosphate 3-epimerase [Synechococcus elongatus PCC 6301]
Length = 222
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMI 71
L+ADFSRLG+++ + +AGA IH DVMDG FVPNI+ G ++ +LR + D HLMI
Sbjct: 8 LSADFSRLGDDVRAVDQAGADWIHVDVMDGRFVPNITIGPLIVEALRPVTQKPLDVHLMI 67
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+ ++ A AG DII+ E+ PH+ R+L I +GK+ GV +NP TPV LE V++
Sbjct: 68 VEPEKYVPDFAKAGADIISVQAEACPHLHRNLAQIKDLGKQAGVVLNPSTPVETLEYVLE 127
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQA 189
D+ILIM+VNPGFGGQ I + +PKIR+ +A+ +R + +EVDGG+ + N +++A
Sbjct: 128 LCDLILIMSVNPGFGGQSFIPAVLPKIRKLRAMCDERGLDPWIEVDGGLKANNTWQVLEA 187
Query: 190 GADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
GA+ +V GS+ FN + + K+ L
Sbjct: 188 GANAIVAGSAVFNAPDYAEAIAAIRNSKRPEL 219
>gi|292489890|ref|YP_003532780.1| D-ribulose-5-phosphate 3-epimerase [Erwinia amylovora CFBP1430]
gi|292900928|ref|YP_003540297.1| ribulose-phosphate 3-epimerase [Erwinia amylovora ATCC 49946]
gi|291200776|emb|CBJ47910.1| ribulose-phosphate 3-epimerase [Erwinia amylovora ATCC 49946]
gi|291555327|emb|CBA23671.1| D-ribulose-5-phosphate 3-epimerase [Erwinia amylovora CFBP1430]
gi|312174074|emb|CBX82327.1| D-ribulose-5-phosphate 3-epimerase [Erwinia amylovora ATCC
BAA-2158]
Length = 228
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 138/219 (63%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ +NP
Sbjct: 61 VTAPIDVHLMVKPVDRLVPDFAKAGASYITFHPEASEHVDRTLQLIREHGCKAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++IL+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + + EVDGGV
Sbjct: 121 TPLSILDYVMDKLDVILLMSVNPGFGGQSFIPGTLNKLRQVRQLIDQSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGA++ V GS+ F Y K +ND++
Sbjct: 181 KVDNIGEIAAAGANMFVAGSAIFGHPD---YKKVINDMR 216
>gi|59712895|ref|YP_205671.1| ribulose-phosphate 3-epimerase [Vibrio fischeri ES114]
gi|59480996|gb|AAW86783.1| D-ribulose-5-phosphate 3-epimerase [Vibrio fischeri ES114]
Length = 225
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 148/225 (65%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + +GA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLASGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS + A AG +ITFH E+S HI R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDSIVPEFAKAGATMITFHVEASEHIDRTLQLIKEHGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE ++D++DMIL+M+VNPGFGGQ I +T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLSCLEYIMDKVDMILLMSVNPGFGGQSFIPNTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI+ + +AGAD+ V GS+ FNQ Y + +++++ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFNQPN---YKEVIDEMRAELAKV 222
>gi|262037438|ref|ZP_06010901.1| ribulose-phosphate 3-epimerase [Leptotrichia goodfellowii F0264]
gi|261748528|gb|EEY35904.1| ribulose-phosphate 3-epimerase [Leptotrichia goodfellowii F0264]
Length = 211
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 104/217 (47%), Positives = 149/217 (68%), Gaps = 6/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I I PS+LAADFS L EI + KAGA+ +H DVMDG FVPNISFGA VI S+R +
Sbjct: 1 MSKKIIIAPSLLAADFSDLKNEIEKVEKAGAEYLHLDVMDGTFVPNISFGAPVISSIRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+ VFD HLM+ + D I DAG DIIT H E++ H+ R+++ I + GKK G+++NP
Sbjct: 61 SNLVFDVHLMVENPDRFIKDFVDAGADIITVHVEATKHLNRTVQLIKSYGKKVGISLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ +++ + IDM+LIMTVNPGFGGQ IE+ KI++ +AL +I +EVDGG+ +
Sbjct: 121 TPLEMIKHELKNIDMVLIMTVNPGFGGQAFIENMTDKIKELRAL--DANIDIEVDGGINT 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K + ++GA++LV GS F+ +Y ++++ LK
Sbjct: 179 ETGKKVKESGANILVAGSYIFSG----NYKEKIDSLK 211
>gi|295677787|ref|YP_003606311.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1002]
gi|295437630|gb|ADG16800.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1002]
Length = 254
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 138/228 (60%), Gaps = 11/228 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 28 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 86
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 87 VDVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASEHIDRTLSLIRDHGCKAGLVFNPA 146
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T + L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEV
Sbjct: 147 TSLNYLDHVMDKVDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYNERTGRDIHLEV 206
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGGV NI + AGAD V GS+ F Q ++ +ALA
Sbjct: 207 DGGVKVDNIAEIAAAGADTFVAGSAIFGQPDHKVVIDKMR----AALA 250
>gi|99078681|ref|YP_611939.1| ribulose-5-phosphate 3-epimerase [Ruegeria sp. TM1040]
gi|99035819|gb|ABF62677.1| ribulose-5-phosphate 3-epimerase [Ruegeria sp. TM1040]
Length = 226
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 144/223 (64%), Gaps = 4/223 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RSIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPAAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I A G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRAAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQ+ I+ T KIR + +IG R + +E+DGGV
Sbjct: 125 AEAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-AKIRSLREMIGDRPVHIEIDGGVDPTT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSALA 222
+V+AGAD+LV GS+ F + Y + + ++ +A A
Sbjct: 184 APLVVEAGADVLVAGSAVFRGGSVEAPEVYGENIRKIRAAANA 226
>gi|90962780|ref|YP_536695.1| ribulose-phosphate 3-epimerase [Lactobacillus salivarius UCC118]
gi|90821974|gb|ABE00612.1| Ribulose-phosphate 3-epimerase [Lactobacillus salivarius UCC118]
Length = 215
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 138/216 (63%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+AD LG ++ + AGA+ +H D+MDG FVPN+SFGA+V+++LR S V
Sbjct: 1 MKIAPSILSADMLNLGADVQKVEDAGAEYLHIDIMDGNFVPNLSFGANVVKALRPQSKMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ + AG DI+ H E++PHI R+L I K V INP TPV+
Sbjct: 61 FDVHLMVNNPENWVEDFIKAGADIVGVHYEATPHIHRALDLIKKNNAKAEVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+ +D +L+MTV+PGFGGQ+ I T+ KIRQ + +R++ +EVDGG+
Sbjct: 121 AIESVLSIVDQVLVMTVDPGFGGQKFIPETLEKIRQLHQIKEERNLNFDIEVDGGINEET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K + GA + V GS FN E A+R+N L+
Sbjct: 181 VKLCRETGATVAVAGSYVFNSGNETH-AERINKLRN 215
>gi|283480134|emb|CAY76050.1| D-ribulose-5-phosphate 3-epimerase [Erwinia pyrifoliae DSM 12163]
Length = 259
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 138/219 (63%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y
Sbjct: 32 MKQFLIAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYG 91
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ +NP
Sbjct: 92 VTAPIDVHLMVKPVDRLVPDFAKAGASYITFHPEASEHVDRTLQLIREHGCKAGLVLNPA 151
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++IL+ V+D++D+ILIM+VNPGFGGQ I T+ K+RQ + LI + + EVDGGV
Sbjct: 152 TPLSILDYVMDKLDVILIMSVNPGFGGQSFIPGTLNKLRQVRKLIDQSGYDIRLEVDGGV 211
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F Y K ++D++
Sbjct: 212 KVDNIGEIAAAGADMFVAGSAIFGHPD---YKKVIDDMR 247
>gi|121634937|ref|YP_975182.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis FAM18]
gi|161870087|ref|YP_001599257.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis 053442]
gi|120866643|emb|CAM10394.1| putative ribulose-phosphate 3-epimerase [Neisseria meningitidis
FAM18]
gi|161595640|gb|ABX73300.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis 053442]
gi|261392494|emb|CAX50045.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase;
PPE; R5P3E) [Neisseria meningitidis 8013]
gi|308389337|gb|ADO31657.1| putative ribulose-phosphate 3-epimerase [Neisseria meningitidis
alpha710]
gi|325130309|gb|EGC53076.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis OX99.30304]
gi|325134508|gb|EGC57153.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M13399]
gi|325138345|gb|EGC60914.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis ES14902]
gi|325142485|gb|EGC64889.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis 961-5945]
gi|325198378|gb|ADY93834.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis G2136]
gi|325202062|gb|ADY97516.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis M01-240149]
Length = 242
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 151/226 (66%), Gaps = 8/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-AYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ + R I++EV
Sbjct: 120 TPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRVRAMLDRYEAQSGRHIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
DGG+ + NI ++ +AGAD V GS+ F + + + +L+KS
Sbjct: 180 DGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAMRAELEKS 225
>gi|307946969|ref|ZP_07662304.1| ribulose-phosphate 3-epimerase [Roseibium sp. TrichSKD4]
gi|307770633|gb|EFO29859.1| ribulose-phosphate 3-epimerase [Roseibium sp. TrichSKD4]
Length = 233
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 97/224 (43%), Positives = 141/224 (62%), Gaps = 5/224 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT S++I PSIL+ADF+ G+EI I G +H DVMDG FVPN++FG + +++R
Sbjct: 1 MTFDRSLKIAPSILSADFANFGKEIEAIEAEGCDWVHVDVMDGHFVPNLTFGPPLCKAIR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ +V D HLMI+ +D +I A+AG DIIT H E+ PH R+L+ I A GKK G+A+N
Sbjct: 61 KHIKTVMDVHLMIAPVDPYIEAFAEAGADIITAHLEAGPHTHRTLQAIRATGKKAGLALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TPV ++D D+ IMTVNPGFGGQ+ I + + ++R+ +A+IG R I +E+DGGV
Sbjct: 121 PGTPVEAAAPLLDLCDLACIMTVNPGFGGQKFIHTQVEQVRKLRAMIGDRPIHIEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKS 219
+ +AGAD+LV GS+ F Y + ++ +
Sbjct: 181 DPVTAPLVAEAGADVLVAGSAVFKGGSVDQPDVYGANIAAIRSA 224
>gi|259415600|ref|ZP_05739521.1| ribulose-phosphate 3-epimerase [Silicibacter sp. TrichCH4B]
gi|259348830|gb|EEW60592.1| ribulose-phosphate 3-epimerase [Silicibacter sp. TrichCH4B]
Length = 227
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 142/224 (63%), Gaps = 4/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RSIKIAPSILSADFANFGQEIRAIEAEGADWVHVDVMDGHFVPNLTFGPAAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQ+ I+ T KIR + +IG R + +E+DGGV
Sbjct: 125 AEAVAHLLDLTDLICVMTVNPGFGGQKFIDMT-AKIRSLREMIGDRPVHIEIDGGVDPST 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSALAI 223
+V+AGAD+LV GS+ F Y + + ++++A
Sbjct: 184 APLVVEAGADVLVAGSAVFRGGSVDAPQVYGENIRKIREAATTA 227
>gi|237803375|ref|ZP_04590960.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|237806727|ref|ZP_04593431.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025356|gb|EGI05412.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331027841|gb|EGI07896.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 224
Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats.
Identities = 108/225 (48%), Positives = 144/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSCGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ IH G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIHEGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN ++ SA A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIDKMRVELASARA 224
>gi|294085585|ref|YP_003552345.1| putative pentose-5-phosphate-3-epimerase protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292665160|gb|ADE40261.1| putative pentose-5-phosphate-3-epimerase protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 221
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 148/219 (67%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I I PSILA+DFSRLG+EI + +AGA IH DVMDG FVPN++FG +I++LR+
Sbjct: 1 MSHEIIIAPSILASDFSRLGDEIKAVDQAGADWIHLDVMDGHFVPNLTFGPPIIKALRNT 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D +FD HLM+S+ D + A AG + +T H E+ H+ R+L I +G K GVA+NP
Sbjct: 61 TDKIFDAHLMVSNPDVLLADYAAAGANYVTVHAEACDHLDRTLSHIRELGCKAGVALNPH 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP A+++ V+D +D++L+MTVNPGFGGQ I + + KI +I R I +EVDGG+T+
Sbjct: 121 TPAAVIQHVMDRLDLVLVMTVNPGFGGQVFIPAMVEKIATINDMIDGRDIIIEVDGGITA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++V+AGA +LV GS+ F + SY+ + ++ +
Sbjct: 181 ETAGAVVRAGAQVLVAGSAIFKGDNQASYSGNIARIRDA 219
>gi|297155756|gb|ADI05468.1| ribulose-phosphate 3-epimerase [Streptomyces bingchenggensis BCW-1]
Length = 244
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 91/224 (40%), Positives = 131/224 (58%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++QI PSIL+ADFSRL EE + GA +H DVMD FVPN++ G V+ +L +
Sbjct: 11 AMAVQINPSILSADFSRLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVEALGKAT 68
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D+ DCHLMI D +AG +TFH E++ R R I A G + +A+ P T
Sbjct: 69 DTPLDCHLMIEDPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPAT 128
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ED++ E+DM+L+MTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV
Sbjct: 129 PIDQYEDLLPELDMVLVMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLEMWLQVDGGVA 188
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ I+ +AGAD+ V GS+ + + + L L + A I
Sbjct: 189 ASTIERCAEAGADVFVAGSAVYGAQDPAKAVEELRGLARQATPI 232
>gi|85711886|ref|ZP_01042941.1| D-ribulose-5-phosphate 3-epimerase [Idiomarina baltica OS145]
gi|85694283|gb|EAQ32226.1| D-ribulose-5-phosphate 3-epimerase [Idiomarina baltica OS145]
Length = 221
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 147/225 (65%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MQP--LIAPSILSADFARLGEEVNNVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDY 58
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG II+FHPE+S H+ R+++TI G + G+ NP
Sbjct: 59 GVTAPIDVHLMVKPVDRIVPDFAAAGASIISFHPEASEHVDRTIQTIKEHGCQAGLVFNP 118
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D+ID+IL+M+VNPGFGGQ+ I T+ K+RQ + I R I LEVDGG
Sbjct: 119 ATPLHYLDYVMDKIDLILLMSVNPGFGGQKFIPGTLDKLRQVRERIDASGRDIRLEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + QAGAD+ V GS+ FN YA+ + +K++ A
Sbjct: 179 VNCDNIGEIAQAGADMFVAGSAIFNADD---YAEVIRTMKQAINA 220
>gi|302541073|ref|ZP_07293415.1| ribulose-phosphate 3-epimerase [Streptomyces hygroscopicus ATCC
53653]
gi|302458691|gb|EFL21784.1| ribulose-phosphate 3-epimerase [Streptomyces himastatinicus ATCC
53653]
Length = 230
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PSIL+ADFSRL +E + GA +H DVMD FVPN++ G V+ +L +D+
Sbjct: 1 MQINPSILSADFSRLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVEALGKATDTP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 59 MDCHLMIEDPDRWAPAYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARAAMALKPATPIE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
ED++ E+DM+L+MTV PGFGGQ ++ +PKIR+ + LI + + L+VDGGV++
Sbjct: 119 PYEDLLPELDMLLVMTVEPGFGGQAFLDIMLPKIRRTRELISRHGLEMWLQVDGGVSAST 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ + + + L L ++A
Sbjct: 179 IERCAEAGADVFVAGSAVYGAEDPDKAVRELRALAENA 216
>gi|225075156|ref|ZP_03718355.1| hypothetical protein NEIFLAOT_00156 [Neisseria flavescens
NRL30031/H210]
gi|224953331|gb|EEG34540.1| hypothetical protein NEIFLAOT_00156 [Neisseria flavescens
NRL30031/H210]
Length = 226
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 102/224 (45%), Positives = 150/224 (66%), Gaps = 9/224 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYATVPV 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I+ A AG +IITFHPE+S H+ RSL I G + G+ +NP TPV I
Sbjct: 65 DVHLMVEPVDDLIHAFAKAGANIITFHPEASRHVDRSLGLIKEYGCQAGLVLNPATPVNI 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE+V+D++DM+L+M+VNPGFGGQ I +T+ KIR+ + ++ + R I+LEVDGGV
Sbjct: 125 LENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYERQSGRHIALEVDGGVK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ NI + AGAD V GS+ F + Y ++++++ +
Sbjct: 185 TDNIAEIAAAGADTFVAGSAIFGKPD---YKAVIDEMRQQLAQV 225
>gi|172057930|ref|YP_001814390.1| ribulose-phosphate 3-epimerase [Exiguobacterium sibiricum 255-15]
gi|171990451|gb|ACB61373.1| Ribulose-phosphate 3-epimerase [Exiguobacterium sibiricum 255-15]
Length = 218
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 143/218 (65%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ L ++ + AGA IHFDVMDG FVPNISFG V+ SLR +D +
Sbjct: 2 IKIAPSILSADFANLERDVKAVKAAGADYIHFDVMDGQFVPNISFGLPVLSSLRQKTDMI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI ++ + +AG DI+TFH E++ H+ R L+ I A G K GV +NP TP++
Sbjct: 62 LDVHLMIDRPENFVEAFVEAGADIVTFHVEATNHVHRVLQQIKAAGAKAGVVLNPHTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V++E+DM+L+MTVNPGFGGQ I + K+ Q AL + + +E+DGGV +
Sbjct: 122 MIEHVLEEVDMVLLMTVNPGFGGQAFIPGVMKKLSQLAALKAEHDLSFEIEIDGGVNAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
K ++ GA++LV GS+ +N Y++ + ++ +A
Sbjct: 182 AKLCIENGANVLVAGSAIYNAPD---YSEAITSIRNAA 216
>gi|89053281|ref|YP_508732.1| ribulose-5-phosphate 3-epimerase [Jannaschia sp. CCS1]
gi|88862830|gb|ABD53707.1| ribulose-5-phosphate 3-epimerase [Jannaschia sp. CCS1]
Length = 226
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 145/220 (65%), Gaps = 4/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSILAADF+ G E+ + GA IH DVMDG FVPN++FG ++++LR +
Sbjct: 5 RSIKIAPSILAADFANFGAEVRAVEDQGADWIHIDVMDGHFVPNLTFGPPMVKALRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMIS +D++I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 TVMDVHLMISPVDAYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + +V+D D++ +MTVNPGFGGQ I+ T KI + + +IG R + +E+DGGV ++
Sbjct: 125 ASAVAEVLDLCDLVCVMTVNPGFGGQSFIDMT-GKIAELRTMIGDREVHIEIDGGVDAKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKS 219
+ +AGAD+LV GS+ F + Y + + ++ S
Sbjct: 184 APLVARAGADVLVAGSAVFRGGSVEDPAPYGENIRTIRAS 223
>gi|241758781|ref|ZP_04756894.1| ribulose-phosphate 3-epimerase [Neisseria flavescens SK114]
gi|241320989|gb|EER57202.1| ribulose-phosphate 3-epimerase [Neisseria flavescens SK114]
Length = 226
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 102/224 (45%), Positives = 150/224 (66%), Gaps = 9/224 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYATVPV 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I+ A AG +IITFHPE+S H+ RSL I G + G+ +NP TPV I
Sbjct: 65 DVHLMVEPVDDLIHAFAKAGANIITFHPEASRHVDRSLGLIKEYGCQAGLVLNPATPVNI 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE+V+D++DM+L+M+VNPGFGGQ I +T+ KIR+ + ++ + R I+LEVDGGV
Sbjct: 125 LENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYERQNGRHIALEVDGGVK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ NI + AGAD V GS+ F + Y ++++++ +
Sbjct: 185 TDNIAEIAAAGADTFVAGSAIFGKPD---YKAVIDEMRQQLAQV 225
>gi|90413589|ref|ZP_01221579.1| ribulose-phosphate 3-epimerase [Photobacterium profundum 3TCK]
gi|90325362|gb|EAS41851.1| ribulose-phosphate 3-epimerase [Photobacterium profundum 3TCK]
Length = 224
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 143/226 (63%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E++ H+ R+L+ I G + GV NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGATMITFHAEATEHLDRTLQLIKECGCQAGVVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ L+ V+D+IDMIL+M+VNPGFGGQ I +T+ K+R+ + I + E+DGGV
Sbjct: 121 TPLHHLDYVMDKIDMILLMSVNPGFGGQSFIPNTLDKLREVRQRIDASGYDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+ NI+ + +AGAD+ V GS+ FN+ Y +++++ ++
Sbjct: 181 KADNIREIAEAGADMFVAGSAIFNKPD---YKAAIDEMRAELAKVE 223
>gi|86147333|ref|ZP_01065647.1| ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
gi|85834898|gb|EAQ53042.1| ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
Length = 224
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 146/219 (66%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDSIVPEFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI + R I LE+DGGV
Sbjct: 121 TPLSCLDYILDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI+ + +AGAD+ V GS+ FNQ Y + +++++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFNQPD---YKEVIDEMR 216
>gi|187479703|ref|YP_787728.1| ribulose-phosphate 3-epimerase [Bordetella avium 197N]
gi|115424290|emb|CAJ50843.1| ribulose-phosphate 3-epimerase [Bordetella avium 197N]
Length = 241
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 101/216 (46%), Positives = 141/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 16 RIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPHVQVPI 75
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + + A AG DIITFHPE+S H+ R+L I G K G+ NP TP++
Sbjct: 76 DVHLMVEPVDEIVPMFAKAGADIITFHPEASRHVDRTLALIRDNGCKAGLVFNPATPLSY 135
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
++ V+D++D++L+M+VNPGFGGQ I +T+ K+RQA+A I + I LEVDGGV
Sbjct: 136 MDYVMDKLDIVLLMSVNPGFGGQAFIPATLDKLRQARARIDAWTQAGGQPILLEVDGGVK 195
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ NI + +AGAD V GS+ F + S K L D
Sbjct: 196 TDNIAEIRRAGADTFVAGSAIFGKPDYASVIKTLRD 231
>gi|222054191|ref|YP_002536553.1| Ribulose-phosphate 3-epimerase [Geobacter sp. FRC-32]
gi|221563480|gb|ACM19452.1| Ribulose-phosphate 3-epimerase [Geobacter sp. FRC-32]
Length = 221
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 99/217 (45%), Positives = 142/217 (65%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 3 KIAPSILSADFSRLGDEVRAVEAAGADYIHIDVMDGSFVPNITIGPLVVEAVRRVTRLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E++ H+ R+++ I + GKK GV++NP T +
Sbjct: 63 DVHLMIDAPDRYIGEFAKAGADIIVVHAEATNHLHRTVQLIKSFGKKAGVSLNPATSLHC 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ ++DE+D++L+MTVNPGFGGQ I++ +PKI+ + L+ K+ + LEVDGGV NI
Sbjct: 123 LDHILDELDLVLLMTVNPGFGGQSFIDACLPKIQALRGLLDKKGLETELEVDGGVKEANI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ F YA + ++K A
Sbjct: 183 AQIAHAGADVFVAGSAVFGSSD---YAATIAEMKLRA 216
>gi|167564222|ref|ZP_02357138.1| ribulose-phosphate 3-epimerase [Burkholderia oklahomensis EO147]
gi|167571373|ref|ZP_02364247.1| ribulose-phosphate 3-epimerase [Burkholderia oklahomensis C6786]
Length = 228
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 141/229 (61%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LE+
Sbjct: 120 TPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEI 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV + NI + AGAD V GS+ F + Y + + +++ + +
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRQVIGEMRDALATV 225
>gi|26987156|ref|NP_742581.1| ribulose-phosphate 3-epimerase [Pseudomonas putida KT2440]
gi|24981789|gb|AAN66045.1|AE016233_11 ribulose-phosphate 3-epimerase [Pseudomonas putida KT2440]
Length = 255
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 141/225 (62%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 32 MQPYA-IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCTALRKY 90
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 91 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIKDGGCKAGLVFNP 150
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ V+D+IDM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 151 ATSLDALKYVMDKIDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 210
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN ++ + ALA
Sbjct: 211 VNVNNIREIAAAGADTFVAGSAIFNAPDYQEVIAKMR--AELALA 253
>gi|198284919|ref|YP_002221240.1| Ribulose-phosphate 3-epimerase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667831|ref|YP_002427600.1| ribulose-phosphate 3-epimerase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198249440|gb|ACH85033.1| Ribulose-phosphate 3-epimerase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520044|gb|ACK80630.1| ribulose-phosphate 3-epimerase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 220
Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 145/221 (65%), Gaps = 6/221 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ + +AGA IH DVMD FVPN++ G V +++ +
Sbjct: 1 MT-QFKISPSILSADFARLGEEVRAVDEAGADYIHIDVMDNHFVPNLTIGPLVAAAIKPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMIS +DS I A AG DIIT HPE++ H+ R+++ IH++G K GV++NP
Sbjct: 60 TQKPLDVHLMISPVDSIIPDFAKAGADIITVHPEATIHLDRTIQLIHSLGCKAGVSLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TP+ +L+ V++ +D++L+M+VNPGFGGQ IE T+ KI + I I LEVDGGV
Sbjct: 120 TPLDVLDYVLESLDLVLVMSVNPGFGGQSFIEYTLRKIEAIRKRIEATGKAIELEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N++ + AGAD+ V GS+ +N YA + +K+
Sbjct: 180 KVDNVRRVADAGADVFVAGSAIYNTPD---YAATIAAFRKA 217
>gi|238754124|ref|ZP_04615482.1| Ribulose-phosphate 3-epimerase [Yersinia ruckeri ATCC 29473]
gi|238707620|gb|EEP99979.1| Ribulose-phosphate 3-epimerase [Yersinia ruckeri ATCC 29473]
Length = 231
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 139/225 (61%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 8 MKKFLIAPSILSADFARLGEDTAKVIAAGADVVHFDVMDNHYVPNLTMGPMVCQALRDYG 67
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP
Sbjct: 68 ITAPIDVHLMVKPVDRIVPDFAKAGASYISFHPEASEHVDRTLQLIKDHGCKAGLVFNPA 127
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + I + + EVDGGV
Sbjct: 128 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRQRIDESGYDIRLEVDGGV 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI+ + AGAD+ V GS+ F + YA ++ ++ A+
Sbjct: 188 KVDNIREVAAAGADMFVAGSAIFGKPD---YAAVIDAMRSELAAV 229
>gi|91776822|ref|YP_546578.1| ribulose-5-phosphate 3-epimerase [Methylobacillus flagellatus KT]
gi|91710809|gb|ABE50737.1| ribulose-5-phosphate 3-epimerase [Methylobacillus flagellatus KT]
Length = 232
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 100/232 (43%), Positives = 145/232 (62%), Gaps = 9/232 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+A+F++LG+EI+++ +GA +HFDVMD +VPN++ G V ++R
Sbjct: 1 MAKPFRIAPSILSANFAKLGQEITDVITSGADIVHFDVMDNHYVPNLTIGPLVCEAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D++ D HLM+ +D I A AG +IITFHPE+S HI RSL I G K+G+ NP
Sbjct: 61 TDAIIDVHLMVKPVDRIIPDFAKAGANIITFHPEASDHIDRSLSLIRDNGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP++ L+ V+D+IDM+L+M+VNPGFGGQ+ I T+ K+R+A+A I R I LE+
Sbjct: 121 TPLSYLDYVMDKIDMVLLMSVNPGFGGQKFIPGTLDKLREARARIDAYTEKTGREIWLEI 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
DGGV NI + +AGAD V GS+ F Y + L+ +
Sbjct: 181 DGGVNPSNIAEIARAGADTFVAGSAVFGAGKDTDPNRYDTVIGALRAELAKV 232
>gi|37523117|ref|NP_926494.1| ribulose-phosphate 3-epimerase [Gloeobacter violaceus PCC 7421]
gi|35214120|dbj|BAC91489.1| ribulose-phosphate 3-epimerase [Gloeobacter violaceus PCC 7421]
Length = 233
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 144/223 (64%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PSIL+ADF+RLGEEI I +AGA IH DVMDG FVPNI+ G +++++R
Sbjct: 1 MAKPVVVAPSILSADFARLGEEIHAIDEAGADWIHVDVMDGRFVPNITIGPLIVKAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAIN 118
+ V D HLMI + +I A AG DIIT H E S+ H+ R+L I +GK+ GV++N
Sbjct: 61 TQKVLDVHLMIVEPEKYIADFAKAGADIITVHCEHNSTVHLHRALSQIKELGKQAGVSLN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP++++E V+D D++L+M+VNPGFGGQ I +PKI + K++ +R + +EVDG
Sbjct: 121 PSTPLSLIEYVLDLCDLVLVMSVNPGFGGQSFIPQVLPKIARLKSMCEERGLDPWIEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ N +++ GA+ +V GS F G YA+ + ++ S
Sbjct: 181 GLKPSNTWQVLEVGANAIVSGSGVFGV-GPARYAEAIEGVRAS 222
>gi|119385299|ref|YP_916355.1| ribulose-phosphate 3-epimerase [Paracoccus denitrificans PD1222]
gi|119375066|gb|ABL70659.1| ribulose-5-phosphate 3-epimerase [Paracoccus denitrificans PD1222]
Length = 244
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 93/205 (45%), Positives = 134/205 (65%), Gaps = 2/205 (0%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT I+I PSIL+ADF+ G+E + GA +H DVMDG FVPN++FG + +++R
Sbjct: 15 MTFDRRIKIAPSILSADFANFGQECRAVEDQGADWVHVDVMDGHFVPNLTFGPAMCKAIR 74
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ V D HLMI+ +D +I A+AG DIIT H E+ PH+ R+L+ I G + G+A+N
Sbjct: 75 PHIRGVMDVHLMIAPVDPYIEAFAEAGSDIITAHVEAGPHVHRTLQAIRGAGARAGLALN 134
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TP ++D++D+I +MTVNPGFGGQ+ I S I K+R+ +A+IG R + +E+DGGV
Sbjct: 135 PGTPADAARPLLDDVDLICVMTVNPGFGGQKFIHSQIEKVRELRAMIGDRPVHIEIDGGV 194
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQ 203
+ AGAD+LV GS+ F
Sbjct: 195 DPTTAPLVAAAGADVLVAGSAVFRG 219
>gi|260463402|ref|ZP_05811602.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
gi|259030727|gb|EEW32003.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
Length = 235
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 108/220 (49%), Positives = 152/220 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PS+LA+DFSRLG+E+ + AGA IH DVMDG FVPNI+FG VI+++RS
Sbjct: 11 MSKKTLIAPSVLASDFSRLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRSR 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D ++ ADAGCD +T H E+ PH+ RSL+TI +GKK GV++NP
Sbjct: 71 TKAFFDCHLMIAPADPYLAAFADAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP + +E V+D +D+ILIMTVNPGFGGQ I + K+R+ KALIG R I +E+DGG+++
Sbjct: 131 TPESAVEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRRVKALIGDRPIRIEIDGGISA 190
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV G++ F +Y + ++ +A
Sbjct: 191 ETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAA 230
>gi|260913446|ref|ZP_05919924.1| ribulose-phosphate 3-epimerase [Pasteurella dagmatis ATCC 43325]
gi|260632386|gb|EEX50559.1| ribulose-phosphate 3-epimerase [Pasteurella dagmatis ATCC 43325]
Length = 222
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 146/226 (64%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ N+ +GA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVQNVLNSGADIIHFDVMDNHYVPNLTFGPPICKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE++ HI RSL+ + G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEATEHIDRSLQLVRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+R+ + I + EVDGG
Sbjct: 120 ATPLSYLDYVMDKVDVILLMSVNPGFGGQSFIPSTLDKLREVRKRIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + +AGAD+ V GS+ F+Q Y K ++++++ +
Sbjct: 180 VKVNNIAEIAKAGADMFVAGSAIFDQPD---YKKVIDEMRQQLATV 222
>gi|257899954|ref|ZP_05679607.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com15]
gi|257837866|gb|EEV62940.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com15]
Length = 216
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 1 MKIAPSILSADFANLQRDIELVEKGGADYIHVDVMDGQFVPNITLGPNIVQAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I A AG DIIT H E++PHI R+L+ ++G K GV INP TPV+
Sbjct: 61 LDVHLMIVDPENYIPAFAKAGADIITVHVEATPHIHRALQMTKSLGVKAGVVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+++ V+ + +L+MTVNPGFGGQ IE T+ KI + L + + ++EVDGG+
Sbjct: 121 MIKHVLPLANQVLVMTVNPGFGGQSFIEETVEKITELADLRKENNWSYAIEVDGGIVPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGAD+ V GS + + + +RL +
Sbjct: 181 AKICKDAGADVFVAGSYIYGAENPVGQIERLKE 213
>gi|220936040|ref|YP_002514939.1| Ribulose-phosphate 3-epimerase [Thioalkalivibrio sp. HL-EbGR7]
gi|219997350|gb|ACL73952.1| Ribulose-phosphate 3-epimerase [Thioalkalivibrio sp. HL-EbGR7]
Length = 229
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 139/223 (62%), Gaps = 6/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MAKPDLIAPSILSADFARLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCEALRKH 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 61 GVTAPIDVHLMVKPVDRIIPDFAKAGASYITFHPEASEHIDRTLQLIKGEGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++DMIL+M+VNPGFGGQ+ I +T+ K+R+A+ I + + + E+DGG
Sbjct: 121 ATPLSYLDYVMDKVDMILLMSVNPGFGGQKFIPATLDKLREARKRIDESGLDIRLEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLK 217
V + NI+ + AGAD V GS+ F Y + ++
Sbjct: 181 VKADNIREIKAAGADTFVAGSAIFGAASKDDPHHYESIIKQMR 223
>gi|120556421|ref|YP_960772.1| ribulose-phosphate 3-epimerase [Marinobacter aquaeolei VT8]
gi|120326270|gb|ABM20585.1| ribulose-5-phosphate 3-epimerase [Marinobacter aquaeolei VT8]
Length = 228
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 146/226 (64%), Gaps = 4/226 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNPYL-IAPSILSADFARLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCEALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I + DAG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDDLIRMFIDAGASYITFHPEASNHIDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
TP++ ++ V+D++DM+L+M+VNPGFGGQ+ I T+ K+++A+ I +I LE+DGG
Sbjct: 120 ATPLSYMDYVMDKLDMVLLMSVNPGFGGQKFIPGTLDKLKEARKKIDASNYNIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI+ + +AGAD V GS+ FN + + + + A +
Sbjct: 180 VKTDNIREIAEAGADTFVAGSAIFNTPDYKATIDAMREELEQARKV 225
>gi|302035778|ref|YP_003796100.1| d-ribulose-5-phosphate 3-epimerase [Candidatus Nitrospira defluvii]
gi|300603842|emb|CBK40174.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Nitrospira defluvii]
Length = 234
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 140/215 (65%), Gaps = 2/215 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+++I PSIL+ADF+RL EE++ + AGA +H DVMDG FVPN++ G ++ +LR +
Sbjct: 4 RTVRIAPSILSADFARLAEEVARVEDAGADWLHIDVMDGHFVPNLTVGPPIVEALRKVTT 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+++ D+ I A+AG D +T H E+ PH+ R++++I G K GV +NP TP
Sbjct: 64 LPLDVHLMMTNPDAFIGEFAEAGADYLTVHVETCPHLHRTVQSIKERGVKAGVTLNPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
L +++ + D+ILIM+VNPGFGGQ+ I S++ KI + +ALI + LEVDGGV
Sbjct: 124 AGTLSEIVRDADLILIMSVNPGFGGQKFIASSLHKIAEVRALIDRSGSRALLEVDGGVKP 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N+K ++ AGA++LV GS+ F+ + L
Sbjct: 184 DNVKEILAAGAEVLVAGSAVFSTDDYTAAITALRA 218
>gi|298290444|ref|YP_003692383.1| ribulose-phosphate 3-epimerase [Starkeya novella DSM 506]
gi|296926955|gb|ADH87764.1| ribulose-phosphate 3-epimerase [Starkeya novella DSM 506]
Length = 226
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 102/197 (51%), Positives = 139/197 (70%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA+DF+RLGEE+ + AGA IH DVMDG FVPNI+FG DVI+++R ++D VFD
Sbjct: 4 IAPSMLASDFARLGEEVRAVDAAGADWIHLDVMDGHFVPNITFGPDVIKAMRPHTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ ++ +I A AG DIIT E++ H+ R L+ I ++GKK GVA+NP T ++L
Sbjct: 64 VHLMIAPVEPYIEAFAKAGADIITVQAEATDHLDRCLQLIRSLGKKAGVALNPATHESVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
V+++ D+IL MTVNPGFGGQ I +PK+ + +A+IG R I LEVDGGVT
Sbjct: 124 AYVLEKTDLILAMTVNPGFGGQAFIPDVVPKLHRLRAMIGGRPIHLEVDGGVTPETAPLC 183
Query: 187 VQAGADLLVVGSSFFNQ 203
+AGA++LV GS+ F
Sbjct: 184 TEAGANVLVAGSAVFKG 200
>gi|269120652|ref|YP_003308829.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268614530|gb|ACZ08898.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 211
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 146/213 (68%), Gaps = 6/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PS+LAADFS L EE+ ++ KAGA IH D+MDG FVPNISFGA VI+ LR S V
Sbjct: 2 IKVAPSVLAADFSILKEELVSLEKAGADYIHLDIMDGNFVPNISFGAPVIKELRKCSKLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + +I +AG DIIT H ES+ H+ R++ I + G K GV +NP TPV
Sbjct: 62 FDVHLMVEMPERYIEDFVNAGADIITVHVESTKHLDRTIELIKSYGIKAGVTLNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ +I+++DM+L+M+VNPGFGGQ IE ++ KI++ K + + + +EVDGG+T K
Sbjct: 122 SLKYIINKVDMVLVMSVNPGFGGQSFIEYSLDKIKEIKNM--RPDVDIEVDGGITDITAK 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+++AGA++LV GS FN Y ++++ L+
Sbjct: 180 RVIEAGANVLVAGSYVFNG----DYKEKIDSLR 208
>gi|167838029|ref|ZP_02464888.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis MSMB43]
Length = 228
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 142/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D++LIM+VNPGFGGQ I + K+R A+A I R I LE+
Sbjct: 120 TPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLRDARARIDAHAARTGREIHLEI 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F Q Y + + +++ + A++
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGQPD---YRQVIGEMRDALAAVE 226
>gi|260574365|ref|ZP_05842369.1| ribulose-phosphate 3-epimerase [Rhodobacter sp. SW2]
gi|259023261|gb|EEW26553.1| ribulose-phosphate 3-epimerase [Rhodobacter sp. SW2]
Length = 229
Score = 280 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G E I GA +H DVMDG FVPN++FG + ++R +
Sbjct: 4 RSIKISPSILSADFANFGAECRAIEAQGADWVHVDVMDGHFVPNLTFGPAMCAAIRPHIK 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMIS +D++I A AG DIIT H E+ PHI R+L+ I G K GV++NP T
Sbjct: 64 GVMDVHLMISPVDAYIEAFAKAGSDIITAHLEAGPHIHRTLQAIRGAGAKAGVSLNPGTG 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + ++D +DM+L+MTVNPGFGGQ+ I S + K+R+ + +IG R I +++DGG+T
Sbjct: 124 LEDMPYLLDMVDMVLVMTVNPGFGGQKFIHSQVDKVRRLREMIGDRPIHIQIDGGITPET 183
Query: 183 IKSLVQAGADLLVVGSSFFNQK---GEISYAKR 212
+ AGAD+LV GS+ F Y +
Sbjct: 184 APLVAAAGADVLVAGSAVFKGGSVSNPAPYGEN 216
>gi|319638450|ref|ZP_07993212.1| ribulose-phosphate 3-epimerase [Neisseria mucosa C102]
gi|317400199|gb|EFV80858.1| ribulose-phosphate 3-epimerase [Neisseria mucosa C102]
Length = 226
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 149/220 (67%), Gaps = 9/220 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y+
Sbjct: 5 RIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPYATVPV 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I+ A AG +IITFHPE+S H+ RSL I G + G+ +NP TPV I
Sbjct: 65 DVHLMVEPVDDLIHAFAKAGANIITFHPEASRHVDRSLGLIKEYGCQAGLVLNPATPVNI 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE+V+D++DM+L+M+VNPGFGGQ I +T+ KIR+ + ++ + R I+LEVDGGV
Sbjct: 125 LENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYEWQSGRHIALEVDGGVK 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + AGAD V GS+ F + Y ++++++
Sbjct: 185 TDNIAEIAAAGADTFVAGSAIFGKPD---YKAVIDEMRQQ 221
>gi|71737951|ref|YP_272946.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558504|gb|AAZ37715.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326023|gb|EFW82081.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320332042|gb|EFW87978.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881737|gb|EGH15886.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 224
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 105/225 (46%), Positives = 145/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGAIYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ ++ A
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRAELAASRA 224
>gi|297181773|gb|ADI17954.1| pentose-5-phosphate-3-epimerase [uncultured Desulfobacterales
bacterium HF0200_07G10]
Length = 255
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 103/215 (47%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSILAADFS+LG+E+ + +AGA IH DVMDG FVPNI+ G V+ ++R ++
Sbjct: 42 VIIAPSILAADFSKLGDEVKAVEQAGADWIHVDVMDGHFVPNITIGPMVVEAIRKVTELP 101
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +++I AG DIIT H E+ PH+ R+++ I GV +NP TP++
Sbjct: 102 LDVHLMIENANNYIGEFISAGSDIITVHVEACPHLNRTVQLIKDQEVMVGVVLNPATPLS 161
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
LE+++ EIDM+LIM+VNPGFGGQ+ I S + KI ++ I+LEVDGGVT N
Sbjct: 162 SLEEILHEIDMVLIMSVNPGFGGQKFIPSMMDKIENLSEIMTHYDHPIALEVDGGVTPDN 221
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +VQAGA +LV GSS FN K Y K +N L+
Sbjct: 222 AEDIVQAGASVLVAGSSIFNTKD---YKKAINSLR 253
>gi|301169282|emb|CBW28879.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae 10810]
Length = 224
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPD---YKQVIDQMRTQLASV 222
>gi|167648735|ref|YP_001686398.1| ribulose-phosphate 3-epimerase [Caulobacter sp. K31]
gi|167351165|gb|ABZ73900.1| Ribulose-phosphate 3-epimerase [Caulobacter sp. K31]
Length = 221
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 141/219 (64%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSILA+DF++LGEE++ I AGA +H DVMDG FVPNI+ G D+++++R +
Sbjct: 3 MTAPL-IAPSILASDFAKLGEEVAAIEAAGADWVHVDVMDGHFVPNITLGPDIVKAIRPH 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS D ++ AG D+I+ HPE+ PH+ RSL+ I +G K GV NP
Sbjct: 62 AKIPFDVHLMISPADPYLEAFRAAGADLISIHPEAGPHLHRSLKRIRELGAKAGVVFNPS 121
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + +E +++++D++L+M+VNPGFGGQ I + K+ + ++ +R + +EVDGGV
Sbjct: 122 TSIDHVEWILEDVDLLLVMSVNPGFGGQSFIPGQLRKVEALRKMVDQRGLDIIIEVDGGV 181
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
T V AGA LV GS+ F G +YA + LK
Sbjct: 182 TPATAPQCVAAGATALVAGSAVFKG-GPDAYAANIRALK 219
>gi|126700194|ref|YP_001089091.1| ribulose-phosphate 3-epimerase [Clostridium difficile 630]
gi|254976166|ref|ZP_05272638.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-66c26]
gi|255093556|ref|ZP_05323034.1| ribulose-phosphate 3-epimerase [Clostridium difficile CIP 107932]
gi|255307608|ref|ZP_05351779.1| ribulose-phosphate 3-epimerase [Clostridium difficile ATCC 43255]
gi|255315299|ref|ZP_05356882.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-76w55]
gi|255517967|ref|ZP_05385643.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-97b34]
gi|255651083|ref|ZP_05397985.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-37x79]
gi|260684148|ref|YP_003215433.1| ribulose-phosphate 3-epimerase [Clostridium difficile CD196]
gi|260687807|ref|YP_003218941.1| ribulose-phosphate 3-epimerase [Clostridium difficile R20291]
gi|306520936|ref|ZP_07407283.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-32g58]
gi|115251631|emb|CAJ69464.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Clostridium difficile]
gi|260210311|emb|CBA64627.1| ribulose-phosphate 3-epimerase [Clostridium difficile CD196]
gi|260213824|emb|CBE05804.1| ribulose-phosphate 3-epimerase [Clostridium difficile R20291]
Length = 223
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 147/219 (67%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
I++ PSIL+ADF++L E++ + AG + +H DVMDG FVPNI+ G V++SL+ +
Sbjct: 2 IKLAPSILSADFAKLLEDVRKVESAGCEYLHIDVMDGHFVPNITLGPLVVKSLKKENINM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + D +I AGCDIIT H E+ H+ R+++ I + G K GV +NP TPV
Sbjct: 62 VFDAHLMIENPDQYIEEFVKAGCDIITVHQEACVHLHRTIQNIKSHGIKAGVVLNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++ V+ ++DM+L+M+VNPGFGGQ I + KI++ KA+I + +I +EVDGG++ +
Sbjct: 122 DTIKHVLPDLDMVLLMSVNPGFGGQSFIPCVLDKIKELKAIIDSQGLNIDIEVDGGISPK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ +VQAGA+++V GS+ F + +N +K+A
Sbjct: 182 NVAEVVQAGANVIVAGSAIFGSDD---IQETVNLFRKNA 217
>gi|262373406|ref|ZP_06066685.1| ribulose-phosphate 3-epimerase [Acinetobacter junii SH205]
gi|262313431|gb|EEY94516.1| ribulose-phosphate 3-epimerase [Acinetobacter junii SH205]
Length = 228
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 102/218 (46%), Positives = 146/218 (66%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAGICKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE++ HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVSPVDRMIGDFLEAGADIITFHPEATDHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLRQARQIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + +AGAD+ V GS+ F Q + ++
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKTVIDQMRA 218
>gi|167582459|ref|ZP_02375333.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis TXDOH]
gi|167620551|ref|ZP_02389182.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis Bt4]
gi|257137808|ref|ZP_05586070.1| ribulose-phosphate 3-epimerase [Burkholderia thailandensis E264]
Length = 228
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 141/229 (61%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D++LIM+VNPGFGGQ I + K+R A+A I R I LE+
Sbjct: 120 TPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLRAARARIDAYTARTGREIHLEI 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV + NI + AGAD V GS+ F + Y + + +++ + A+
Sbjct: 180 DGGVKADNIAEIAAAGADTFVAGSAIFGKPD---YRQVIGEMRDALAAV 225
>gi|126725016|ref|ZP_01740859.1| Pentose-5-phosphate-3-epimerase [Rhodobacterales bacterium
HTCC2150]
gi|126706180|gb|EBA05270.1| Pentose-5-phosphate-3-epimerase [Rhodobacterales bacterium
HTCC2150]
Length = 228
Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats.
Identities = 98/218 (44%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
S++I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 8 RSVKIAPSILSADFANFGAECEAIEAQGADWVHIDVMDGHFVPNITFGPSTCAAIRPHIK 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLMI+++D +I A +G D IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 68 GIMDVHLMIATVDPYIEAFAKSGADFITAHVEAGPHIHRTLQAIRGAGCKAGVALNPGTP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V+ +E+++ +D++ +MTVNPGFGGQ IES + K R +A+IG R I +E+DGGV+
Sbjct: 128 VSAVENLLGMVDLVCVMTVNPGFGGQSFIESQVEKTRVLRAMIGDRPIHIEIDGGVSPLT 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLK 217
KS+V AGAD+LV GS+ F Y + + ++
Sbjct: 188 AKSVVDAGADVLVAGSAVFKGGSVSKPEVYGENMRAIR 225
>gi|103488603|ref|YP_618164.1| ribulose-phosphate 3-epimerase [Sphingopyxis alaskensis RB2256]
gi|98978680|gb|ABF54831.1| ribulose-5-phosphate 3-epimerase [Sphingopyxis alaskensis RB2256]
Length = 223
Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 151/219 (68%), Gaps = 3/219 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+++I PSIL+ADF++LGEE+ I AGA +H DVMDG FVPN++ G V+++LR +S
Sbjct: 6 PAVRIAPSILSADFAKLGEEVRAIEAAGADWVHIDVMDGHFVPNLTIGPMVVKALRPHSS 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMIS +D ++ A AG DIIT HPE+ PHI R+++ I ++GK+ GV++NP TP
Sbjct: 66 LPFDVHLMISPVDHFLDAFAAAGADIITVHPEAGPHIHRTVQHIKSLGKQAGVSLNPATP 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+L+ +ID+ID++LIM+VNPGFGGQ I S + KI K +I K R I LEVDGG+ +
Sbjct: 126 AKMLDYLIDDIDLVLIMSVNPGFGGQSFIASQLRKIEAVKKMIEKSGRDIRLEVDGGIDA 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+LV G++ F G +YA + L+ +
Sbjct: 186 ATAPRAISAGADVLVAGTATFKG-GPGAYADNIRRLRGA 223
>gi|315640407|ref|ZP_07895518.1| ribulose-phosphate 3-epimerase [Enterococcus italicus DSM 15952]
gi|315483832|gb|EFU74317.1| ribulose-phosphate 3-epimerase [Enterococcus italicus DSM 15952]
Length = 218
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 132/217 (60%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 MKIAPSILSADFANLQRDIEFVEKHGADYIHVDVMDGQFVPNITFGPAVVQAIRPITKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + I+ A AG DII H E++PH+ R+++ I A K V INP TPV
Sbjct: 63 LDVHLMIVNPERFIHEFAKAGADIIGVHIEATPHLHRAIQMIKAENVKAEVVINPGTPVE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+ +D IL+MTVNPGFGGQ + KIR+ L + +EVDGG+ +
Sbjct: 123 AIKYVLPLVDQILVMTVNPGFGGQSFLPEMADKIRELAKLKEQYGYHYDIEVDGGIDDQT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ +AGA++ V GS + + +R+N LK++
Sbjct: 183 IRVCAEAGANVFVAGSYIYGAQHPE---ERINALKEA 216
>gi|302392187|ref|YP_003828007.1| ribulose-phosphate 3-epimerase [Acetohalobium arabaticum DSM 5501]
gi|302204264|gb|ADL12942.1| ribulose-phosphate 3-epimerase [Acetohalobium arabaticum DSM 5501]
Length = 215
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 139/213 (65%), Gaps = 4/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILAADFS L EEI ++K A+ +H DVMDG FVPNI+ G V+ ++ +D +
Sbjct: 2 VKIAPSILAADFSNLEEEIKQVSK--AEYLHLDVMDGHFVPNITIGPLVVEAISDKTDQL 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I AD+G ++IT H E+ PH+ R+++ I K GVA+NP TP+
Sbjct: 60 LDAHLMIENPDQYIPDFADSGAELITVHAEACPHLHRTVQNIKEQEVKAGVALNPATPLT 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ ++ E+D++L+MTVNPGFGGQ+ IE +PKI + + I + + I ++VDGG+ N
Sbjct: 120 ALDHILPELDLVLLMTVNPGFGGQKFIEDMLPKINRLRKRIEQNNLDIDIQVDGGIKPYN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +V+AGA+++V GS+ F L +
Sbjct: 180 VDRVVEAGANVIVAGSAIFGSDDPGQAVVDLQE 212
>gi|68249166|ref|YP_248278.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 86-028NP]
gi|68057365|gb|AAX87618.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 86-028NP]
Length = 234
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 143/225 (63%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 11 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 70 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 130 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F + ++ S A
Sbjct: 190 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKQVIDQIRTQLASVSA 234
>gi|150026088|ref|YP_001296914.1| ribulose-phosphate 3-epimerase [Flavobacterium psychrophilum
JIP02/86]
gi|149772629|emb|CAL44112.1| Ribulose-phosphate 3-epimerase [Flavobacterium psychrophilum
JIP02/86]
Length = 219
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 135/218 (61%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ I PS+LAADF+ L +I I + A H DVMDG FVPNIS+G VI +++ +
Sbjct: 1 MNNTL-IAPSVLAADFANLQRDIEMINNSQADWFHIDVMDGHFVPNISYGMPVIEAIKKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + +I A G DIIT H ES+ H+ R+L I G K GV +N
Sbjct: 60 ATKPLDVHLMIEKPERYIEEFAKIGADIITVHYESTVHLHRTLTQIKNAGCKAGVVLNLT 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++LED++ E M+LIM++NPGFGGQ+ E T K+R+ + +I + + +E+DGGV
Sbjct: 120 TPVSVLEDILSECYMVLIMSINPGFGGQKFEEITYNKVRKLRKMITDQGLHTLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
T +N K LV+AGA++LV GS F + L +L
Sbjct: 180 TDKNAKQLVEAGANVLVAGSYVFKAQSPAQAIIDLKNL 217
>gi|20339362|gb|AAM19354.1|AF369887_1 ribulose-5-phosphate-3-epimerase [Pisum sativum]
Length = 281
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 93/221 (42%), Positives = 138/221 (62%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 55 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHIDVMDGRFVPNITIGPLVVDALRPVT 114
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI D + AG DII+ H E S+ H+ R++ + ++G K GV +NP
Sbjct: 115 DLPLDVHLMIVEPDQRVPDFIKAGADIISVHCEQSSTIHLHRAVNQVKSLGAKAGVVLNP 174
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGG
Sbjct: 175 GTPLSAIEYVLDVVDLVLIMSVNPGFGGQSFIESHVKKIAELRRLCVEKGVNPWIEVDGG 234
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
VT N +++AGA+ LV GS+ F K K + K+
Sbjct: 235 VTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKR 275
>gi|289209524|ref|YP_003461590.1| ribulose-phosphate 3-epimerase [Thioalkalivibrio sp. K90mix]
gi|288945155|gb|ADC72854.1| ribulose-phosphate 3-epimerase [Thioalkalivibrio sp. K90mix]
Length = 229
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 143/223 (64%), Gaps = 6/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MAQPDFIAPSILSADFARLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCDALRKH 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S HI R+L+ IH+ G K G+ NP
Sbjct: 61 GVTAPIDVHLMVKPVDRIIPDFAQAGASYITFHPEASDHIDRTLQLIHSEGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ LE V+D++DMIL+M+VNPGFGGQ+ I +T+ K+R A+ +I + R I LE+DGG
Sbjct: 121 ATPLSYLEYVMDKVDMILLMSVNPGFGGQKFIPATLDKLRAARKMIEESGRDIRLEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLK 217
V + NI+ + AGAD V GS+ F + Y + ++
Sbjct: 181 VKADNIREIKAAGADTFVAGSAIFGAGNDADANRYNSIIQQMR 223
>gi|260553838|ref|ZP_05826107.1| ribulose-phosphate 3-epimerase [Acinetobacter sp. RUH2624]
gi|260405048|gb|EEW98549.1| ribulose-phosphate 3-epimerase [Acinetobacter sp. RUH2624]
Length = 228
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 103/218 (47%), Positives = 144/218 (66%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L+ Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKKY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GVKAPIDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + +AGAD+ V GS+ F Q ++
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKVVIDQMRA 218
>gi|209516527|ref|ZP_03265381.1| Ribulose-phosphate 3-epimerase [Burkholderia sp. H160]
gi|209502968|gb|EEA02970.1| Ribulose-phosphate 3-epimerase [Burkholderia sp. H160]
Length = 238
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 138/228 (60%), Gaps = 11/228 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 12 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 71 VDVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLSLIRDHGCKAGLVFNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T + L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEV
Sbjct: 131 TSLNYLDHVMDKVDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYNERTGRDIHLEV 190
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGGV NI + AGAD V GS+ F Q ++ +ALA
Sbjct: 191 DGGVKVDNIAEIAAAGADTFVAGSAIFGQPDHKVVIDKMR----AALA 234
>gi|238026113|ref|YP_002910344.1| ribulose-phosphate 3-epimerase [Burkholderia glumae BGR1]
gi|237875307|gb|ACR27640.1| Ribulose-phosphate 3-epimerase [Burkholderia glumae BGR1]
Length = 228
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 100/229 (43%), Positives = 139/229 (60%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANVISFHPEGSDHIDRTLSLIKDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDLVLIMSVNPGFGGQSFIPEALRKVREARAKIDAYRERTGREIHLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV NI + AGAD V GS+ F + Y +++++ S +
Sbjct: 180 DGGVKVDNIAEIAAAGADTFVAGSAIFGKPD---YRAVIDEMRASLAGV 225
>gi|167037723|ref|YP_001665301.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167040384|ref|YP_001663369.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X514]
gi|256752278|ref|ZP_05493141.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914468|ref|ZP_07131784.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X561]
gi|307724296|ref|YP_003904047.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X513]
gi|320116138|ref|YP_004186297.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166854624|gb|ABY93033.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X514]
gi|166856557|gb|ABY94965.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|256748846|gb|EEU61887.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889403|gb|EFK84549.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X561]
gi|307581357|gb|ADN54756.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter sp. X513]
gi|319929229|gb|ADV79914.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 216
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 96/217 (44%), Positives = 144/217 (66%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F+ L E+I I K A +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKIAPSILSANFANLLEDIKKIEK-DADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I A++G DIIT H E+ H+ R+++ I GKK GV++NP TP+
Sbjct: 60 FDVHLMIENPDLYIEEFANSGADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ ++ ++DMILIMTVNPGFGGQ+ I+S + KI + K + ++ +EVDGG+ N
Sbjct: 120 TLKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMREDLGLNFEIEVDGGINLYN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K +V+AGAD++V GS+ F A+ + + +K+
Sbjct: 180 VKEVVEAGADIIVAGSAIFESSNP---AQTIKEFRKA 213
>gi|260582730|ref|ZP_05850517.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae NT127]
gi|260094180|gb|EEW78081.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae NT127]
Length = 234
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 143/225 (63%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 11 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 70 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 130 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F + ++ S A
Sbjct: 190 VKVDNIAEIAAAGADMFVAGSAIFGKPNYKQVIDQIRTQLASVSA 234
>gi|261867075|ref|YP_003254997.1| ribulose-phosphate 3-epimerase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412407|gb|ACX81778.1| ribulose-phosphate 3-epimerase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 224
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 145/226 (64%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ + K G IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVEKVLKCGGDVIHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S HI R+L+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGASYITFHPEASEHIDRTLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++QA+ I + EVDGG
Sbjct: 120 ATPLSYLDYVMDKVDIILLMSVNPGFGGQSFIPATLDKLKQARKRIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + +AGAD+ V GS+ F+Q Y K ++++++ +
Sbjct: 180 VKVSNIAEVARAGADMFVAGSAIFDQPD---YQKVIDEMRQQLATV 222
>gi|294649428|ref|ZP_06726856.1| ribulose-phosphate 3-epimerase [Acinetobacter haemolyticus ATCC
19194]
gi|292824685|gb|EFF83460.1| ribulose-phosphate 3-epimerase [Acinetobacter haemolyticus ATCC
19194]
Length = 228
Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats.
Identities = 103/218 (47%), Positives = 146/218 (66%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++L+SY
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAHICKALKSY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE++ HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVSPVDRMIGDFLEAGADIITFHPEATEHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLDKLRQARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + +AGAD+ V GS+ F Q + ++
Sbjct: 181 VGPANIREVAEAGADMFVAGSAIFGQPDYKTVIDQMRA 218
>gi|145631755|ref|ZP_01787516.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae R3021]
gi|145635347|ref|ZP_01791049.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittAA]
gi|144982616|gb|EDJ90162.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae R3021]
gi|145267353|gb|EDK07355.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittAA]
Length = 224
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPN---YKQVIDQMRTQLASV 222
>gi|163787529|ref|ZP_02181976.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Flavobacteriales bacterium ALC-1]
gi|159877417|gb|EDP71474.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Flavobacteriales bacterium ALC-1]
Length = 220
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 93/221 (42%), Positives = 132/221 (59%), Gaps = 3/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+LAADF L + + + A H DVMDG FVPNIS+G VI +++ +
Sbjct: 1 MASKL-IAPSMLAADFGNLQRDTEMVNNSDADWFHIDVMDGHFVPNISYGMPVIAAIKKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + +I A G DIIT H ES+ H+ R+LR I G K G+ +N
Sbjct: 60 ATKPLDVHLMIEKPERYIEEFAKVGADIITVHYESTVHLHRTLRQIKDTGCKAGIVLNIT 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ +LED++ E MIL+M++NPGFGGQ+ + T +I+ + +I + + +E+DGGV
Sbjct: 120 TPLNVLEDILPECYMILLMSINPGFGGQKFEDITYKRIKNLRKMIDDQGLDTRIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
T +NIK LV+AGAD V GS F + K L +L S
Sbjct: 180 TDKNIKKLVEAGADTFVAGSHVFKSDNPTATIKNLKNLANS 220
>gi|297733953|emb|CBI15200.3| unnamed protein product [Vitis vinifera]
Length = 290
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 56 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVGALRPVT 115
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 116 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNP 175
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 176 ATPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRICAEKGVNPWIEVDGG 235
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
V N +++AGA+ LV GS+ F K
Sbjct: 236 VGPANAYKVIEAGANALVAGSAVFGAKDYAE 266
>gi|51598036|ref|YP_072227.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis IP
32953]
gi|108809305|ref|YP_653221.1| ribulose-phosphate 3-epimerase [Yersinia pestis Antiqua]
gi|108814070|ref|YP_649837.1| ribulose-phosphate 3-epimerase [Yersinia pestis Nepal516]
gi|145597405|ref|YP_001161480.1| ribulose-phosphate 3-epimerase [Yersinia pestis Pestoides F]
gi|150260837|ref|ZP_01917565.1| ribulose-phosphate 3-epimerase [Yersinia pestis CA88-4125]
gi|153950747|ref|YP_001402910.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis IP
31758]
gi|162419892|ref|YP_001608039.1| ribulose-phosphate 3-epimerase [Yersinia pestis Angola]
gi|166010606|ref|ZP_02231504.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213375|ref|ZP_02239410.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167425716|ref|ZP_02317469.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167468239|ref|ZP_02332943.1| ribulose-phosphate 3-epimerase [Yersinia pestis FV-1]
gi|170022490|ref|YP_001718995.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis YPIII]
gi|186897235|ref|YP_001874347.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis PB1/+]
gi|218927366|ref|YP_002345241.1| ribulose-phosphate 3-epimerase [Yersinia pestis CO92]
gi|229836364|ref|ZP_04456531.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis Pestoides A]
gi|229840011|ref|ZP_04460170.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842092|ref|ZP_04462247.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904607|ref|ZP_04519718.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis Nepal516]
gi|270488179|ref|ZP_06205253.1| ribulose-phosphate 3-epimerase [Yersinia pestis KIM D27]
gi|294502244|ref|YP_003566306.1| ribulose-phosphate 3-epimerase [Yersinia pestis Z176003]
gi|51591318|emb|CAH22984.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis IP
32953]
gi|108777718|gb|ABG20237.1| ribulose-5-phosphate 3-epimerase [Yersinia pestis Nepal516]
gi|108781218|gb|ABG15276.1| ribulose-5-phosphate 3-epimerase [Yersinia pestis Antiqua]
gi|115345977|emb|CAL18841.1| ribulose-phosphate 3-epimerase [Yersinia pestis CO92]
gi|145209101|gb|ABP38508.1| ribulose-5-phosphate 3-epimerase [Yersinia pestis Pestoides F]
gi|149290245|gb|EDM40322.1| ribulose-phosphate 3-epimerase [Yersinia pestis CA88-4125]
gi|152962242|gb|ABS49703.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis IP
31758]
gi|162352707|gb|ABX86655.1| ribulose-phosphate 3-epimerase [Yersinia pestis Angola]
gi|165990696|gb|EDR42997.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205673|gb|EDR50153.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167055406|gb|EDR65200.1| ribulose-phosphate 3-epimerase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749024|gb|ACA66542.1| Ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis YPIII]
gi|186700261|gb|ACC90890.1| ribulose-phosphate 3-epimerase [Yersinia pseudotuberculosis PB1/+]
gi|229678725|gb|EEO74830.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis Nepal516]
gi|229690402|gb|EEO82456.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696377|gb|EEO86424.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706432|gb|EEO92439.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis Pestoides A]
gi|262360324|gb|ACY57045.1| ribulose-phosphate 3-epimerase [Yersinia pestis D106004]
gi|262364275|gb|ACY60832.1| ribulose-phosphate 3-epimerase [Yersinia pestis D182038]
gi|270336683|gb|EFA47460.1| ribulose-phosphate 3-epimerase [Yersinia pestis KIM D27]
gi|294352703|gb|ADE63044.1| ribulose-phosphate 3-epimerase [Yersinia pestis Z176003]
gi|320013289|gb|ADV96860.1| D-ribulose-5-phosphate 3-epimerase [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 225
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 138/223 (61%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKYLIAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYITFHPEASEHVDRTLQLIKESGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ FNQ + + +L +A
Sbjct: 181 KVENIRQIAAAGADMFVAGSAIFNQPDYAAVIDAMRNELAMAA 223
>gi|145637926|ref|ZP_01793568.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittHH]
gi|145268866|gb|EDK08827.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittHH]
Length = 224
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKVNNIAEIAAAGADMFVAGSAIFGKPD---YKQVIDQMRTQLASV 222
>gi|114797584|ref|YP_762043.1| ribulose-phosphate 3-epimerase [Hyphomonas neptunium ATCC 15444]
gi|114737758|gb|ABI75883.1| ribulose-phosphate 3-epimerase [Hyphomonas neptunium ATCC 15444]
Length = 222
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 104/224 (46%), Positives = 144/224 (64%), Gaps = 4/224 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF++LGEEI I AGA IH DVMDG FVPN++FG VI LR +
Sbjct: 1 MKP-VLISPSILSADFAKLGEEIRAIDAAGADMIHVDVMDGHFVPNLTFGPPVIEKLRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +FD HLMI+ +D I A AG DI+T HPE+ H+ R+++ I A G + GVA+NP
Sbjct: 60 TKKLFDVHLMIAPVDPFIQDFAKAGADILTVHPEAGAHLHRTIQAIRAAGMRPGVALNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +++E VI +ID++L+M+VNPGFGGQ IES + K+ Q + +I R I LE+DGG+
Sbjct: 120 TPASVIEPVIGDIDLVLVMSVNPGFGGQSFIESQLRKVEQLRRMIDASGRDIILEIDGGL 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + AG +V GS+ F G +YA + L+ A
Sbjct: 180 NAETAPRAIAAGVTAIVAGSAVFKG-GPDAYAANIRALRPQVNA 222
>gi|56695681|ref|YP_166032.1| ribulose-phosphate 3-epimerase [Ruegeria pomeroyi DSS-3]
gi|56677418|gb|AAV94084.1| ribulose-phosphate 3-epimerase [Ruegeria pomeroyi DSS-3]
Length = 229
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/224 (43%), Positives = 141/224 (62%), Gaps = 4/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G EI I GA +H DVMDG FVPN++FG +++ R Y
Sbjct: 5 RKIKIAPSILSADFANFGAEIRAIEAEGADWVHVDVMDGHFVPNLTFGPMAVKAFRPYVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 TVMDVHLMIAPVDPYIDAYADAGADVLTAHIEAGPHIHRTLQAIRGAGMKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQ+ I+ T KI + + +IG R + +E+DGGV +
Sbjct: 125 AESVAHLLDLTDLICVMTVNPGFGGQKFIDMT-AKIARLRQMIGDRPVHIEIDGGVDPKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSALAI 223
+ QAGAD+LV GS+ F Y + + +++ +A +
Sbjct: 184 APLVAQAGADVLVAGSAVFRGGSVDNPGVYGQNIAEIRAAAEGV 227
>gi|326389537|ref|ZP_08211104.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter ethanolicus JW
200]
gi|325994542|gb|EGD52967.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter ethanolicus JW
200]
Length = 216
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 140/213 (65%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F+ L E++ I K A +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKIAPSILSANFANLLEDVKKIEK-DADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I A++G DIIT H E+ H+ R+++ I GKK GV++NP TP+
Sbjct: 60 FDVHLMIENPDLYIEEFANSGADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ ++ ++DMILIMTVNPGFGGQ+ I+S + KI + K + ++ +EVDGG+ N
Sbjct: 120 TLKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMREDLGLNFEIEVDGGINLYN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K +V+AGAD++V GS+ F+ K +
Sbjct: 180 VKEVVEAGADIIVAGSAIFDSSNPAQTIKEFRE 212
>gi|302561753|ref|ZP_07314095.1| ribulose-phosphate 3-epimerase [Streptomyces griseoflavus Tu4000]
gi|302479371|gb|EFL42464.1| ribulose-phosphate 3-epimerase [Streptomyces griseoflavus Tu4000]
Length = 228
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 94/224 (41%), Positives = 133/224 (59%), Gaps = 6/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P QI PSIL+ADF+RL +E + AGA +H DVMD FVPN++ G V+ SL
Sbjct: 1 MAP--QISPSILSADFARLSDEAKAV--AGADWLHVDVMDNHFVPNLTLGVPVVESLARA 56
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ DCHLMI + D +AG +TFH E++ R R I A G + +A+ P
Sbjct: 57 TDTPLDCHLMIEAPDRWAPQFVEAGAGSVTFHVEAATAPVRLAREIRAKGARASMALRPA 116
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV
Sbjct: 117 TPVEPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGV 176
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
++ I+ AGAD+ V GS+ + + L + ++A A
Sbjct: 177 SAATIEQCADAGADVFVAGSAVYGAADPADAVRALRNQAEAATA 220
>gi|319788091|ref|YP_004147566.1| ribulose-phosphate 3-epimerase [Pseudoxanthomonas suwonensis 11-1]
gi|317466603|gb|ADV28335.1| ribulose-phosphate 3-epimerase [Pseudoxanthomonas suwonensis 11-1]
Length = 228
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 149/226 (65%), Gaps = 5/226 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P++ I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTV-IAPSILSADFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG ++I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GVQAFIDVHLMVEPVDRIVPDFAAAGANLISFHPEASRHVHRTIQLIRSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV L+ V++++D++++M+VNPGFGGQ I ST+ K+R +A+I K + I LE+DGG
Sbjct: 120 ATPVEALDWVLEDLDLVMLMSVNPGFGGQAFIPSTLDKLRAVRAMIDKTGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKSALA 222
V + NI + AGAD V GS+ F + YA + +K + A
Sbjct: 180 VKADNIGQIAAAGADTFVAGSAIFAEPRTREHYADVVGRMKAAVAA 225
>gi|197335900|ref|YP_002157083.1| ribulose-phosphate 3-epimerase [Vibrio fischeri MJ11]
gi|197317390|gb|ACH66837.1| ribulose-phosphate 3-epimerase [Vibrio fischeri MJ11]
Length = 225
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 147/225 (65%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + +GA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLASGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS + A AG +ITFH E+S HI R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDSIVPEFAKAGATMITFHVEASEHIDRTLQLIKEHGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE ++D++DMIL+M+VNPGFGGQ I +T+ K+R + +I R I LE+DGGV
Sbjct: 121 TPLSCLEYIMDKVDMILLMSVNPGFGGQSFIPNTLDKLRAVRKMIDDSGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI+ + +AGAD+ V GS+ FNQ Y + +++++ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFNQPN---YKEVIDEMRAELAKV 222
>gi|302790491|ref|XP_002977013.1| hypothetical protein SELMODRAFT_228435 [Selaginella moellendorffii]
gi|302797983|ref|XP_002980752.1| hypothetical protein SELMODRAFT_154018 [Selaginella moellendorffii]
gi|300151758|gb|EFJ18403.1| hypothetical protein SELMODRAFT_154018 [Selaginella moellendorffii]
gi|300155491|gb|EFJ22123.1| hypothetical protein SELMODRAFT_228435 [Selaginella moellendorffii]
Length = 283
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 141/226 (62%), Gaps = 7/226 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ SLR +
Sbjct: 57 KKDVIVSPSILSANFSKLGEQVKAVEAAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPVT 116
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + A AG DII+ H E S+ H+ R++ I +G K GV +NP
Sbjct: 117 DLPLDVHLMIVEPEQRVPDFAKAGADIISVHCENASTIHLHRTINQIKDLGCKAGVVLNP 176
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ +E V++ +D++LIM+VNPGFGGQ IES + KI K L ++ ++ +EVDGG
Sbjct: 177 ATPLGAIEYVLEVVDLVLIMSVNPGFGGQSFIESQVKKISDLKRLCAEKGVNPWIEVDGG 236
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
VT N +++AGA+ +V GS+ F K SY++ + +K S +
Sbjct: 237 VTPSNAYKVIEAGANAVVAGSAVFGAK---SYSEAIKGIKTSKKPV 279
>gi|255101739|ref|ZP_05330716.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-63q42]
Length = 223
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 147/219 (67%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
I++ PSIL+ADF++L E++ + AG + +H DVMDG FVPNI+ G V++SL+ +
Sbjct: 2 IKLAPSILSADFAKLLEDVRKVESAGCEYLHIDVMDGHFVPNITLGPLVVKSLKKENINM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + D +I AGCDIIT H E+ H+ R+++ I + G K GV +NP TPV
Sbjct: 62 VFDAHLMIENPDQYIEEFVKAGCDIITVHQEACVHLHRTIQNIKSHGIKAGVVLNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++ V+ ++DM+L+M+VNPGFGGQ I + KI++ KA+I + +I +EVDGG++ +
Sbjct: 122 DTIKHVLPDLDMVLLMSVNPGFGGQSFIPCVLDKIKELKAIIDSQGLNIDIEVDGGISPK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ +VQAGA+++V GS+ F + +N +K+A
Sbjct: 182 NVAEVVQAGANIIVAGSAIFGSDD---IQETVNLFRKNA 217
>gi|268592442|ref|ZP_06126663.1| ribulose-phosphate 3-epimerase [Providencia rettgeri DSM 1131]
gi|291312232|gb|EFE52685.1| ribulose-phosphate 3-epimerase [Providencia rettgeri DSM 1131]
Length = 224
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 137/217 (63%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKNFLIAPSILSADFARLGEDTANVLAAGADIVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG I+FHPE+S H+ RSL+ I G G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGATHISFHPEASEHVDRSLQLIREHGCTAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++DMIL+M+VNPGFGGQ I T+ K+RQ + LI + + EVDGGV
Sbjct: 121 TPLSYLDYVMDKVDMILLMSVNPGFGGQSFIPQTLNKLRQVRKLIDESGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + AGAD V GS+ F+Q + + +
Sbjct: 181 KVNNIAEIAAAGADTFVAGSAIFDQPDYKTVIDAMRN 217
>gi|259910036|ref|YP_002650392.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Erwinia pyrifoliae Ep1/96]
gi|224965658|emb|CAX57190.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Erwinia pyrifoliae Ep1/96]
gi|310765638|gb|ADP10588.1| D-ribulose-5-phosphate 3-epimerase [Erwinia sp. Ejp617]
Length = 228
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 138/219 (63%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ +NP
Sbjct: 61 VTAPIDVHLMVKPVDRLVPDFAKAGASYITFHPEASEHVDRTLQLIREHGCKAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++IL+ V+D++D+ILIM+VNPGFGGQ I T+ K+RQ + LI + + EVDGGV
Sbjct: 121 TPLSILDYVMDKLDVILIMSVNPGFGGQSFIPGTLNKLRQVRKLIDQSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F Y K ++D++
Sbjct: 181 KVDNIGEIAAAGADMFVAGSAIFGHPD---YKKVIDDMR 216
>gi|293391449|ref|ZP_06635783.1| ribulose-phosphate 3-epimerase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951983|gb|EFE02102.1| ribulose-phosphate 3-epimerase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 224
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 145/226 (64%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ + K G IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVEKVLKCGGDVIHFDVMDNHYVPNLTFGPAVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE++ HI R+L+ I G K+G+ NP
Sbjct: 60 GISAPIDVHLMVKPVDRIIPDFAKAGASYITFHPEATEHIDRTLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++QA+ I + EVDGG
Sbjct: 120 ATPLSYLDYVMDKVDIILLMSVNPGFGGQSFIPATLDKLKQARKRIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + +AGAD+ V GS+ F+Q Y K ++++++ +
Sbjct: 180 VKVSNIAEVARAGADMFVAGSAIFDQPD---YQKVIDEMRQQLATV 222
>gi|307244455|ref|ZP_07526564.1| ribulose-phosphate 3-epimerase [Peptostreptococcus stomatis DSM
17678]
gi|306492148|gb|EFM64192.1| ribulose-phosphate 3-epimerase [Peptostreptococcus stomatis DSM
17678]
Length = 218
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 151/217 (69%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF+RL E + AG + +H DVMDG FVPNI+FGA +I+SLR + V
Sbjct: 1 MKLAPSVLSADFARLLESCKKVEAAGCEYLHLDVMDGHFVPNITFGAPIIKSLRKDLNMV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS D + +A AGCDIIT H E+ H+ R+++ I + G K GV +NP TPV
Sbjct: 61 FDAHLMISDPDKFLPDLAAAGCDIITVHYETCTHLHRTIQNIKSHGIKAGVVLNPATPVC 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+++ V+ ++DM+L+M+VNPGFGGQ+ I + K+++ + +I + + +EVDGGVTS N
Sbjct: 121 MIKHVLGDLDMVLLMSVNPGFGGQKFIPEVLDKVKELRKMIDDKGLDIEIEVDGGVTSEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
IK+LV AGAD+LV GS+ F ++ K + DL+K+
Sbjct: 181 IKALVDAGADVLVAGSAIFGKEDID---KAVMDLRKA 214
>gi|319404179|emb|CBI77772.1| ribulose-phosphate 3-epimerase [Bartonella rochalimae ATCC
BAA-1498]
Length = 224
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 112/221 (50%), Positives = 154/221 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+LA+DFS+LG+E+S++ AGA IH D+MDG FVPNI+FG DV+++LR
Sbjct: 1 MSRSHLIAPSLLASDFSKLGQELSDVLDAGADWIHLDIMDGHFVPNITFGPDVVKALRPQ 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFD HLMI +D ++ A AG DIIT H ESS H+ RSL+ I AMGKK G+AINP
Sbjct: 61 TKAVFDVHLMIKPVDPYLESFAKAGSDIITIHAESSTHLHRSLQMIKAMGKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +LE ++D++D+ILIMTVNPGFGGQ I KI++ K +I R I LEVDGG+T
Sbjct: 121 TSEHVLEYLLDQLDLILIMTVNPGFGGQNFIPDMEDKIKRVKNMIANRPIDLEVDGGITI 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGKTAKAGANVFVAGSAIYKNGNKELYKTRINALRQAAI 221
>gi|117618311|ref|YP_857676.1| ribulose-phosphate 3-epimerase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559718|gb|ABK36666.1| ribulose-phosphate 3-epimerase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 270
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/220 (45%), Positives = 142/220 (64%), Gaps = 5/220 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT I PSIL+ADF+RLG++++ + AGA +HFDVMD +VPN++ G V ++LR
Sbjct: 44 MTLMKDFLIAPSILSADFARLGDDVAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALR 103
Query: 59 SYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
Y ++ D HLM+ +D I A AG +ITFHPE+S H+ RSL I G + G+ +
Sbjct: 104 DYGIEAPIDVHLMVKPVDRIIPDFAKAGASLITFHPEASDHVDRSLGLIKEQGCQAGLVL 163
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVD 175
NP TP+ LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + R I LE+D
Sbjct: 164 NPATPLTCLEYVMDKLDVILLMSVNPGFGGQSFIPGTLDKLRQVRRLIDESGRDIRLEID 223
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV NI+ + QAGAD+ V GS+ F++ + +
Sbjct: 224 GGVKVDNIREIAQAGADMFVAGSAIFSRPDYKAVIDEMRA 263
>gi|299535927|ref|ZP_07049247.1| ribulose-phosphate 3-epimerase [Lysinibacillus fusiformis ZC1]
gi|298728679|gb|EFI69234.1| ribulose-phosphate 3-epimerase [Lysinibacillus fusiformis ZC1]
Length = 223
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 144/219 (65%), Gaps = 2/219 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSILAA+F+ LGEE+ + +AGA+ IH DVMDG FVPNISFG+ V+ ++R +
Sbjct: 3 IQIAPSILAANFANLGEEVKEVEQAGAQLIHIDVMDGHFVPNISFGSIVLDAIRPLTKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG D IT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 63 LDVHLMIENPDQYIEQFAKAGADYITVHVEACHHLHRTIQLIRSFGVKAGVVLNPHTPIE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ ++++IDM+L+MTVNPGFGGQ+ I S + KI +I +R + +E+DGG+T+
Sbjct: 123 SIQHILEDIDMVLLMTVNPGFGGQKFIHSVVSKIEALSTIIKERGLDIAIEIDGGITAET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I QAGA + V GS+ ++++ + + + ++A+
Sbjct: 183 IVPCAQAGATIFVAGSAIYSKEDRTAALQEILLAGEAAI 221
>gi|237809353|ref|YP_002893793.1| ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
gi|237501614|gb|ACQ94207.1| ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
Length = 226
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 145/223 (65%), Gaps = 4/223 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+++N+ AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 3 MKPYL-IAPSILSADFARLGEDVANVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 61
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H R+L+ I G + G+ +NP
Sbjct: 62 GITAPIDVHLMVKPVDRIIPDFAKAGASIITFHPEASEHPDRTLQLIKEHGCQAGLVLNP 121
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + I + R I LEVDGG
Sbjct: 122 ATSLHYLDHVMDKLDIILLMSVNPGFGGQSFIPATLDKLRQVRQRIQQSGRDIRLEVDGG 181
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V + NI+ + AGAD+ V GS+ F+Q + R+ SA
Sbjct: 182 VKTDNIRQIADAGADMFVAGSAIFDQPDYAAVIARMRQELDSA 224
>gi|238751127|ref|ZP_04612622.1| Ribulose-phosphate 3-epimerase [Yersinia rohdei ATCC 43380]
gi|238710605|gb|EEQ02828.1| Ribulose-phosphate 3-epimerase [Yersinia rohdei ATCC 43380]
Length = 225
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/223 (44%), Positives = 140/223 (62%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKNFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTFGPMVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG I+FHPE+S H+ R+L+ I G K G+ +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFARAGATYISFHPEASEHVDRTLQLIKESGCKAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T ++ LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TSLSYLEYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ FNQ + + +L SA
Sbjct: 181 KVDNIRQIAAAGADMFVAGSAIFNQPDYATVIDAMRSELAMSA 223
>gi|237749110|ref|ZP_04579590.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes OXCC13]
gi|229380472|gb|EEO30563.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes OXCC13]
Length = 226
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 143/225 (63%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+ LG E+ N+ KAGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QYRIAPSILSADFAELGNEVRNVVKAGADMIHFDVMDNHYVPNLTMGPMVCAAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D D HLM+ +D I A AG +II+FHPE+S HI R+L+ IH G K G+ NP
Sbjct: 60 VDVPIDVHLMVKPVDRIIPDFAKAGANIISFHPEASEHIDRTLQLIHDNGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L V+D++D+ILIM+VNPGFGGQ I + KI +A+I R I LEVDGGV
Sbjct: 120 TPLDYLLHVMDKLDLILIMSVNPGFGGQSFIPHALKKIETVRAMIDSSGRQIMLEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD V GS+ F+Q YA+ + ++++ ++
Sbjct: 180 KVDNIAEIAAAGADTFVAGSAIFSQPD---YARVIREMREQLASV 221
>gi|311696177|gb|ADP99050.1| ribulose-phosphate 3-epimerase-like protein [marine bacterium HP15]
Length = 228
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 145/226 (64%), Gaps = 4/226 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNPYL-IAPSILSADFARLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCEALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I + DAG ITFHPE++ HI RSL+ I G + G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDDLIRMFIDAGASYITFHPEATNHIDRSLQLIRDGGCQAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
TP+ ++ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ I +I LE+DGG
Sbjct: 120 ATPLHYMDHVMDKLDMVLMMSVNPGFGGQKFIPGTLDKLREARKRIDASNYNIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI+ + +AGAD V GS+ FN + + + + A +
Sbjct: 180 VKTENIREIAEAGADTFVAGSAIFNTDDYKTTIDAMREELEQARRV 225
>gi|147817756|emb|CAN66664.1| hypothetical protein VITISV_031724 [Vitis vinifera]
Length = 312
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 56 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVGALRPVT 115
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 116 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNP 175
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 176 ATPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRICAEKGVNPWIEVDGG 235
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
V N +++AGA+ LV GS+ F K
Sbjct: 236 VGPANAYKVIEAGANALVAGSAVFGAKDYAE 266
>gi|260584624|ref|ZP_05852370.1| ribulose-phosphate 3-epimerase [Granulicatella elegans ATCC 700633]
gi|260157647|gb|EEW92717.1| ribulose-phosphate 3-epimerase [Granulicatella elegans ATCC 700633]
Length = 214
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 125/213 (58%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+A+F+ LGE++ + + GA IH D MDG FVPN++ G +++ LR +
Sbjct: 1 MKVAPSILSANFATLGEDVKKVEQLGADWIHIDAMDGQFVPNLTLGPNIVEGLRPITTLT 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+ + + A AG D I+ H E++ HI R+L+ I + G K G+ INP TPV+
Sbjct: 61 LDCHLMVQEPERFVKEFAKAGADYISVHIEATNHIHRTLQLIKSEGVKAGIVINPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ V+ +D++L+MTVNPGFGGQ I T+ K+R+ L + +EVDGGV +
Sbjct: 121 AISAVLGMVDLVLVMTVNPGFGGQAFIPETLDKVRELVELREEYGYHYLIEVDGGVNGQT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K +AG D+ V GS + + +
Sbjct: 181 AKLCREAGVDVAVAGSYVYYADDIKKAIDSIKE 213
>gi|312963404|ref|ZP_07777886.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens WH6]
gi|311282210|gb|EFQ60809.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens WH6]
Length = 224
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 145/225 (64%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLASGADFVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITAPIDAHLMVSPVDRIIGDFIEAGATYITFHPEASLHVDRTLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN ++ + ALA
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPNYQEVIDKMR--AELALA 222
>gi|255656554|ref|ZP_05401963.1| ribulose-phosphate 3-epimerase [Clostridium difficile QCD-23m63]
gi|296449994|ref|ZP_06891758.1| ribulose-phosphate 3-epimerase [Clostridium difficile NAP08]
gi|296878375|ref|ZP_06902383.1| ribulose-phosphate 3-epimerase [Clostridium difficile NAP07]
gi|296261264|gb|EFH08095.1| ribulose-phosphate 3-epimerase [Clostridium difficile NAP08]
gi|296430673|gb|EFH16512.1| ribulose-phosphate 3-epimerase [Clostridium difficile NAP07]
Length = 223
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 147/219 (67%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
I++ PSIL+ADF++L E++ + AG + +H DVMDG FVPNI+ G V++SL+ +
Sbjct: 2 IKLAPSILSADFAKLLEDVRKVESAGCEYLHIDVMDGHFVPNITLGPLVVKSLKKENINM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + D +I AGCDIIT H E+ H+ R+++ I + G K GV +NP TP+
Sbjct: 62 VFDAHLMIENPDQYIEEFVKAGCDIITVHQEACVHLHRTIQNIKSHGIKAGVVLNPATPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++ V+ ++DM+L+M+VNPGFGGQ I + KI++ KA+I + +I +EVDGG++ +
Sbjct: 122 DTIKHVLPDLDMVLLMSVNPGFGGQSFIPCVLDKIKELKAIIDSQGLNIDIEVDGGISPK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ +VQAGA+++V GS+ F + +N +K+A
Sbjct: 182 NVDKVVQAGANVIVAGSAIFGSDD---IQETVNLFRKNA 217
>gi|148979188|ref|ZP_01815367.1| ribulose-phosphate 3-epimerase [Vibrionales bacterium SWAT-3]
gi|145961946|gb|EDK27236.1| ribulose-phosphate 3-epimerase [Vibrionales bacterium SWAT-3]
Length = 224
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ + A AG +ITFH E+S HI R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDNIVPEFAKAGASMITFHVEASEHIDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI + R I LE+DGGV
Sbjct: 121 TPLSCLDYIMDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+ + +AGAD+ V GS+ FNQ Y + +++++ ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFNQPD---YKEVIDEMRAELAKVN 223
>gi|16263936|ref|NP_436728.1| putative pentose-5-phosphate-3-epimerase protein [Sinorhizobium
meliloti 1021]
gi|307316435|ref|ZP_07595878.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti AK83]
gi|15140060|emb|CAC48588.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti 1021]
gi|306897633|gb|EFN28376.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti AK83]
Length = 228
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 106/209 (50%), Positives = 144/209 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PS+L+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+FG VI++LR
Sbjct: 1 MNEKTIIAPSVLSADFSRLGEEVEAVCRAGADWIHLDVMDGHFVPNITFGPPVIKALRDR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFDCHLMI ++ A AGCDIIT H E++ H+ RSL+ I +G K GV++NP
Sbjct: 61 TDKVFDCHLMIEPPTPYLGAFACAGCDIITVHAEATTHLDRSLQAIRDVGCKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +++E V+D +D++L+MTVNPGFGGQ I + + K+R+ +++IG R I +E+DGGVT
Sbjct: 121 TPESVIEYVLDRLDLVLLMTVNPGFGGQDFIPAVVDKVRRVRSMIGGRPIHIEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ AGAD+LV GS+ F E Y
Sbjct: 181 ETAPLVAAAGADVLVAGSAVFKGGSEEHY 209
>gi|332850601|ref|ZP_08432864.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6013150]
gi|332865685|ref|ZP_08436507.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6013113]
gi|332730593|gb|EGJ61908.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6013150]
gi|332735158|gb|EGJ66239.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6013113]
Length = 235
Score = 279 bits (715), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/218 (45%), Positives = 143/218 (65%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I + EVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGCDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + +AGAD+ V GS+ F Q ++
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKVVIDQMRA 218
>gi|260912232|ref|ZP_05918784.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 472 str.
F0295]
gi|260633666|gb|EEX51804.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 472 str.
F0295]
Length = 230
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 133/218 (61%), Gaps = 2/218 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PS+L+ADF L E+ I ++ A +H DVMDG FVPNISFG V+ ++
Sbjct: 13 MMKKPLIAPSLLSADFLNLNAEVEMINESEADWLHMDVMDGVFVPNISFGFPVLEAVGKA 72
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D H MI +++I A AG ++ H E+ H+ R++ IH G K GVA+NP
Sbjct: 73 CKKPMDVHFMIVHPENYIEQTAKAGAMLMCVHQEACVHLHRTVAKIHETGMKAGVALNPS 132
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++LED+I+++D++L+M+VNPGFGGQ+ IE+T+ K+++ + LI +EVDGGV
Sbjct: 133 TPVSVLEDIINDVDLVLLMSVNPGFGGQKFIENTLNKVKRLRQLIDSTGSKALIEVDGGV 192
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ L++AGAD+LV G+ F +L L
Sbjct: 193 QAQTAPLLIEAGADVLVAGNYVFKSATPKETIHQLKSL 230
>gi|237728705|ref|ZP_04559186.1| ribulose-phosphate 3-epimerase [Citrobacter sp. 30_2]
gi|283835780|ref|ZP_06355521.1| hypothetical protein CIT292_10174 [Citrobacter youngae ATCC 29220]
gi|226909327|gb|EEH95245.1| ribulose-phosphate 3-epimerase [Citrobacter sp. 30_2]
gi|291067945|gb|EFE06054.1| ribulose-phosphate 3-epimerase [Citrobacter youngae ATCC 29220]
Length = 225
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 140/220 (63%), Gaps = 6/220 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTARALTAGADVVHFDVMDNHYVPNLTIGPMVLKSLRKYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ AGAD+ V GS+ F+Q Y K +++++ +
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMRNELAKV 222
>gi|186477444|ref|YP_001858914.1| ribulose-phosphate 3-epimerase [Burkholderia phymatum STM815]
gi|184193903|gb|ACC71868.1| Ribulose-phosphate 3-epimerase [Burkholderia phymatum STM815]
Length = 227
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANVISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDKLDLVLIMSVNPGFGGQSFIPEALNKLREARAKINAYKEKTGREIHLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV NI + AGAD V GS+ F Y ++ ++ + ++
Sbjct: 180 DGGVKVDNIAEIAAAGADTFVAGSAIFGHPD---YKAVIDKMRGALASV 225
>gi|183600690|ref|ZP_02962183.1| hypothetical protein PROSTU_04282 [Providencia stuartii ATCC 25827]
gi|188019792|gb|EDU57832.1| hypothetical protein PROSTU_04282 [Providencia stuartii ATCC 25827]
Length = 224
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 138/225 (61%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG + I+FH E+S H+ R+L+ I G G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGANHISFHVEASEHVDRTLQLIKEHGCTAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ LE V+D++DMIL+M+VNPGFGGQ I T+ K+RQ + +I + + E+DGGV
Sbjct: 121 TPLSHLEYVMDKVDMILLMSVNPGFGGQSFIPHTLTKLRQVRKMIDESGYDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD V GS+ F Q Y ++ ++K +
Sbjct: 181 KVDNIAEIAAAGADTFVAGSAIFGQPD---YKTVIDQMRKELQKV 222
>gi|330815422|ref|YP_004359127.1| Ribulose-phosphate 3-epimerase [Burkholderia gladioli BSR3]
gi|327367815|gb|AEA59171.1| Ribulose-phosphate 3-epimerase [Burkholderia gladioli BSR3]
Length = 228
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 101/229 (44%), Positives = 139/229 (60%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANVISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D+ILIM+VNPGFGGQ I + KIR+A+A I R I LEV
Sbjct: 120 TPLHYLDHVMDRLDLILIMSVNPGFGGQSFIPEALRKIREARAKIDAYRERTGREIHLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV NI + AGAD V GS+ F + Y +++++ + +
Sbjct: 180 DGGVKVDNIAEIAAAGADTFVAGSAIFGKPD---YKAVIDEMRTALAGV 225
>gi|291612752|ref|YP_003522909.1| ribulose-phosphate 3-epimerase [Sideroxydans lithotrophicus ES-1]
gi|291582864|gb|ADE10522.1| ribulose-phosphate 3-epimerase [Sideroxydans lithotrophicus ES-1]
Length = 228
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 93/218 (42%), Positives = 134/218 (61%), Gaps = 6/218 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
QI PSIL+A+F++LGEE+ N+ +GA +HFDVMD +VPN++ G V +LR + +
Sbjct: 3 QIAPSILSANFAKLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGVTAP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG ITFHPE+S HI R++ I G K G+ NP TP+
Sbjct: 63 IDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHIDRTIGLIKESGCKAGLVFNPATPLD 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
+LE + ++DM+L+M+VNPGFGGQ+ I + K R + +I K + LE+DGGV N
Sbjct: 123 VLEYTLPKLDMVLLMSVNPGFGGQKFIPYVLDKARAVRKMIDAGKYNCRLEIDGGVGPAN 182
Query: 183 IKSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLK 217
IK + +AG D V GS+ F N + Y + +L+
Sbjct: 183 IKEVAEAGVDTFVAGSAVFSKYNANDKNRYDTIIGELR 220
>gi|148825155|ref|YP_001289908.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittEE]
gi|148715315|gb|ABQ97525.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittEE]
Length = 224
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 144/225 (64%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F + ++ S +A
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKQVIDQMRTQLASVIA 224
>gi|188535315|ref|YP_001909112.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Erwinia tasmaniensis Et1/99]
gi|188030357|emb|CAO98248.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Erwinia tasmaniensis Et1/99]
Length = 228
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 137/219 (62%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTARALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ +NP
Sbjct: 61 VTAPIDVHLMVKPVDRLVPDFAKAGASYITFHPEASEHVDRTLQLIREHGCKAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++IL+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + I + EVDGGV
Sbjct: 121 TPLSILDYVMDKLDVILLMSVNPGFGGQSFIPGTLNKLRQVRERIDHSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ NI + AGAD+ V GS+ F Y K ++D++
Sbjct: 181 KADNIGEIAAAGADMFVAGSAIFGHPN---YKKVIDDMR 216
>gi|269103986|ref|ZP_06156683.1| ribulose-phosphate 3-epimerase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163884|gb|EEZ42380.1| ribulose-phosphate 3-epimerase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 224
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 138/217 (63%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + +GA +HFDVMD +VPN++FGA + ++LR+Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLASGADVVHFDVMDNHYVPNLTFGAPICQALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D+ D HLM+ +D I A AG +ITFH E++ H+ R+L+ I G K GV NP
Sbjct: 61 IDAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEATEHLDRTLQLIKEHGCKAGVVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ L+ ++D+IDMIL+M+VNPGFGGQ I +T+ K+R+ + I + + E+DGGV
Sbjct: 121 TPLHHLDYIMDKIDMILLMSVNPGFGGQSFIPATLDKLREVRRRIDESGYDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + +AGAD+ V GS+ F Q ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPDYKEVIDQMRA 217
>gi|262195808|ref|YP_003267017.1| ribulose-phosphate 3-epimerase [Haliangium ochraceum DSM 14365]
gi|262079155|gb|ACY15124.1| ribulose-phosphate 3-epimerase [Haliangium ochraceum DSM 14365]
Length = 234
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 91/207 (43%), Positives = 136/207 (65%), Gaps = 2/207 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ SI I PSIL+ADF+RLGEE+ + +AGA +H DVMDG FVPN++ G V+ ++R+
Sbjct: 1 MSRSILIAPSILSADFARLGEEVRALAEAGADMLHVDVMDGHFVPNLTIGPPVVAAVRAC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM+ + D ++ A+AG DII H E+ PH+ R++ I+ +GK+ V +NP
Sbjct: 61 TELPLDVHLMVQNADDYLERYAEAGADIIAVHAEACPHLHRTVGAINELGKRACVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T + + V++ + M+L+M+VNPGFGGQ I + +PKIR + +I +R + + EVDGGV
Sbjct: 121 TSLDSVRYVLEGLSMVLLMSVNPGFGGQSFIPAVLPKIRALREMIAERKLDIDVEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKG 205
N +V AGA+ LV GS F G
Sbjct: 181 KIDNTAEVVAAGANALVSGSGIFRHPG 207
>gi|149928488|ref|ZP_01916722.1| Ribulose-phosphate 3-epimerase [Limnobacter sp. MED105]
gi|149822791|gb|EDM82043.1| Ribulose-phosphate 3-epimerase [Limnobacter sp. MED105]
Length = 226
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 90/221 (40%), Positives = 137/221 (61%), Gaps = 7/221 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNPFV-IAPSILSADFARLGEEVKNVIAAGADWVHFDVMDNHYVPNLTIGPLVCEALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++ D HLM+ +D I A AG ++I+ HPE + H+ R+L I G + G+ +NP
Sbjct: 60 TTAMIDVHLMVRPVDRIIPDFAKAGANLISVHPEGTDHLDRTLGLIRDSGCQAGIVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR------SISLEV 174
TP++ ++ V+D++D+IL+M+VNPGFGGQ I + K+ + + I +I LEV
Sbjct: 120 TPISWVDHVMDKLDLILVMSVNPGFGGQSFIPQALVKLAELRKRIDAHVAKGGQNIRLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGGV NI + +AGAD V GS+ F + + ++
Sbjct: 180 DGGVKPDNIAQIARAGADTFVAGSAIFGKPDYKAVIDQMRA 220
>gi|134093490|ref|YP_001098565.1| ribulose-phosphate 3-epimerase [Herminiimonas arsenicoxydans]
gi|133737393|emb|CAL60436.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Herminiimonas arsenicoxydans]
Length = 221
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 138/216 (63%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
PS +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MPSYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ +D + A AG +IITFHPE+S H+ R+L+ I G K G+ NP T
Sbjct: 61 QVPIDVHLMVKPVDRIVPDFAKAGANIITFHPEASEHVDRTLQLIRDNGCKAGLVFNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ LE V+D++D+IL+M+VNPGFGGQ I T+ KI + LI + R I LEVDGG+
Sbjct: 121 PLHYLEHVMDKLDIILLMSVNPGFGGQSFIPHTLKKIAAVRKLIDESGRDIMLEVDGGIK 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI++ +AGAD V GS+ F + + + +
Sbjct: 181 VDNIEAAARAGADTFVAGSAIFGKPDYKAVIDAMRN 216
>gi|238788955|ref|ZP_04632745.1| Ribulose-phosphate 3-epimerase [Yersinia frederiksenii ATCC 33641]
gi|238722982|gb|EEQ14632.1| Ribulose-phosphate 3-epimerase [Yersinia frederiksenii ATCC 33641]
Length = 225
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 138/223 (61%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ FNQ + + +L SA
Sbjct: 181 KVDNIRQIAAAGADMFVAGSAIFNQPDYAAVIDAMRSELAMSA 223
>gi|145640540|ref|ZP_01796124.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae R3021]
gi|145275126|gb|EDK14988.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 22.4-21]
Length = 224
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 146/226 (64%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLELIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPD---YKQVIDQMRTQLASV 222
>gi|295687551|ref|YP_003591244.1| ribulose-phosphate 3-epimerase [Caulobacter segnis ATCC 21756]
gi|295429454|gb|ADG08626.1| ribulose-phosphate 3-epimerase [Caulobacter segnis ATCC 21756]
Length = 219
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 140/219 (63%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSILA+DF+RLGEE++ I AGA +H DVMDG FVPNI+ G D+++++R +
Sbjct: 1 MTAPL-IAPSILASDFARLGEEVAAIEAAGADWVHVDVMDGHFVPNITLGPDIVKAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS D ++ AG DII+ HPE+ PH+ RSL+ I +G K GV NP
Sbjct: 60 AKIPFDVHLMISPADPYLEAFRAAGADIISIHPEAGPHLHRSLKRIRELGAKAGVVFNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T + +E +++++D++L+M+VNPGFGGQ I + K+ + +I K + + EVDGGV
Sbjct: 120 TSIDHVEWILEDVDLLLVMSVNPGFGGQSFIPGQLRKVEALRKMIDKAGLDILLEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
T V AGA LV GS+ F G +YA + LK
Sbjct: 180 TPVTAPQCVAAGATALVAGSAVFKG-GREAYAANIRALK 217
>gi|262393104|ref|YP_003284958.1| ribulose-phosphate 3-epimerase [Vibrio sp. Ex25]
gi|262336698|gb|ACY50493.1| ribulose-phosphate 3-epimerase [Vibrio sp. Ex25]
Length = 223
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 143/219 (65%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASDHVDRTLQLIKEHGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+A LE ++D++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLASLEFIMDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI+ + +AGAD+ V GS+ F Q Y + ++ ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPD---YKQVIDQMR 216
>gi|168210631|ref|ZP_02636256.1| ribulose-phosphate 3-epimerase [Clostridium perfringens B str. ATCC
3626]
gi|170711300|gb|EDT23482.1| ribulose-phosphate 3-epimerase [Clostridium perfringens B str. ATCC
3626]
Length = 217
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 147/214 (68%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIPYSLDKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIK +V+AGA++LV GS+ F + K L +
Sbjct: 182 NIKKIVEAGANVLVAGSAVFKEDKIEENIKALRE 215
>gi|229815382|ref|ZP_04445717.1| hypothetical protein COLINT_02429 [Collinsella intestinalis DSM
13280]
gi|229809162|gb|EEP44929.1| hypothetical protein COLINT_02429 [Collinsella intestinalis DSM
13280]
Length = 226
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 142/217 (65%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ SIQI PSIL+AD + L ++ I + A IH DVMDG FVPN+S+G ++++ +S
Sbjct: 1 MSASIQISPSILSADMANLAHDLKRI--SNADLIHVDVMDGHFVPNLSYGTAIVKACKSA 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLM+S+ D +N DAG D++T H E+S H+ R++ I + G K GV +NP
Sbjct: 59 TDIPLDVHLMVSNPDDTVNWYIDAGADLVTVHYEASTHLHRTVSHIKSRGCKAGVVLNPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LED++DE+DM+L+M+VNPGFGGQ+ I T+ K+R+ +A+ + + +E+DGGV
Sbjct: 119 TPVDVLEDILDELDMVLLMSVNPGFGGQKFIPRTLDKLRRLRAMCVEHGVDPLIEIDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ N + L AGA +LV GS+ F + + +
Sbjct: 179 GAGNAEELGAAGATVLVAGSAVFGAEDPAQAVEDIRQ 215
>gi|18310718|ref|NP_562652.1| ribulose-phosphate 3-epimerase [Clostridium perfringens str. 13]
gi|168214213|ref|ZP_02639838.1| ribulose-phosphate 3-epimerase [Clostridium perfringens CPE str.
F4969]
gi|168217023|ref|ZP_02642648.1| ribulose-phosphate 3-epimerase [Clostridium perfringens NCTC 8239]
gi|182625878|ref|ZP_02953644.1| ribulose-phosphate 3-epimerase [Clostridium perfringens D str.
JGS1721]
gi|18145399|dbj|BAB81442.1| ribulose-phosphate 3-epimerase [Clostridium perfringens str. 13]
gi|170714293|gb|EDT26475.1| ribulose-phosphate 3-epimerase [Clostridium perfringens CPE str.
F4969]
gi|177908912|gb|EDT71404.1| ribulose-phosphate 3-epimerase [Clostridium perfringens D str.
JGS1721]
gi|182380927|gb|EDT78406.1| ribulose-phosphate 3-epimerase [Clostridium perfringens NCTC 8239]
Length = 217
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 147/214 (68%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIPYSLDKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIK +V+AGA++LV GS+ F + K L +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKEDKIEENIKALRE 215
>gi|88861003|ref|ZP_01135638.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas tunicata D2]
gi|88816931|gb|EAR26751.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas tunicata D2]
Length = 223
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 103/217 (47%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MSKFLIAPSILSADFARLGQDVEAVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS I + ADAG IITFHPE+S H+ R+L+ I G + G+ +NP
Sbjct: 61 ITAPIDVHLMVKPVDSLIPMFADAGASIITFHPEASEHVDRTLQLIKDHGCQAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++ LE V+D +D+IL+M+VNPGFGGQ I T+ K+RQ KALI R+I LEVDGGV
Sbjct: 121 TSLSYLEHVMDRLDVILLMSVNPGFGGQSFIPHTLEKLRQVKALINASGRNIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIK + +AGAD+ V GS+ FNQ ++
Sbjct: 181 NVDNIKEIAEAGADMFVAGSAIFNQPDYKGVIDQMRA 217
>gi|307823232|ref|ZP_07653462.1| ribulose-phosphate 3-epimerase [Methylobacter tundripaludum SV96]
gi|307736007|gb|EFO06854.1| ribulose-phosphate 3-epimerase [Methylobacter tundripaludum SV96]
Length = 223
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 143/221 (64%), Gaps = 7/221 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F++LGEE+ N+ KAGA +HFDVMD FVPN++ G V +LR + +
Sbjct: 6 IAPSILSANFAKLGEEVDNVLKAGADVVHFDVMDNHFVPNLTIGPLVCEALRKHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG IITFHPE+S HI R+L+ I G K G+ NP TP+
Sbjct: 66 DVHLMVEPVDRLIPDFAKAGASIITFHPEASVHIDRTLQLIKDCGCKAGLVFNPGTPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I S + K+R+ + I + + E+DGGV NI
Sbjct: 126 LDYVMDKLDMILLMSVNPGFGGQSFIPSALDKLREVRTRIDNSGLDIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK-KSALAI 223
+ + AGAD V GS+ F+Q Y K +++++ + A A+
Sbjct: 186 REIKAAGADTFVAGSAIFSQPD---YKKVIDEMRAELAKAV 223
>gi|121729034|ref|ZP_01682035.1| ribulose-phosphate 3-epimerase [Vibrio cholerae V52]
gi|147674230|ref|YP_001218118.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O395]
gi|121628682|gb|EAX61153.1| ribulose-phosphate 3-epimerase [Vibrio cholerae V52]
gi|146316113|gb|ABQ20652.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O395]
gi|227014513|gb|ACP10723.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O395]
Length = 236
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 13 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 72
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 73 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 132
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 133 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGV 192
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 193 KVENIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 236
>gi|15642620|ref|NP_232253.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121588099|ref|ZP_01677847.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 2740-80]
gi|153819037|ref|ZP_01971704.1| ribulose-phosphate 3-epimerase [Vibrio cholerae NCTC 8457]
gi|153821554|ref|ZP_01974221.1| ribulose-phosphate 3-epimerase [Vibrio cholerae B33]
gi|153825097|ref|ZP_01977764.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MZO-2]
gi|153830049|ref|ZP_01982716.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 623-39]
gi|183179608|ref|ZP_02957819.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MZO-3]
gi|227082741|ref|YP_002811292.1| ribulose-phosphate 3-epimerase [Vibrio cholerae M66-2]
gi|254226800|ref|ZP_04920373.1| ribulose-phosphate 3-epimerase [Vibrio cholerae V51]
gi|254285819|ref|ZP_04960781.1| ribulose-phosphate 3-epimerase [Vibrio cholerae AM-19226]
gi|254851164|ref|ZP_05240514.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MO10]
gi|297581465|ref|ZP_06943388.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC385]
gi|298500552|ref|ZP_07010356.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MAK 757]
gi|9657215|gb|AAF95766.1| ribulose-phosphate 3-epimerase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547642|gb|EAX57739.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 2740-80]
gi|125620693|gb|EAZ49054.1| ribulose-phosphate 3-epimerase [Vibrio cholerae V51]
gi|126510418|gb|EAZ73012.1| ribulose-phosphate 3-epimerase [Vibrio cholerae NCTC 8457]
gi|126520939|gb|EAZ78162.1| ribulose-phosphate 3-epimerase [Vibrio cholerae B33]
gi|148874448|gb|EDL72583.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 623-39]
gi|149741243|gb|EDM55285.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MZO-2]
gi|150424001|gb|EDN15940.1| ribulose-phosphate 3-epimerase [Vibrio cholerae AM-19226]
gi|183013019|gb|EDT88319.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MZO-3]
gi|227010629|gb|ACP06841.1| ribulose-phosphate 3-epimerase [Vibrio cholerae M66-2]
gi|254846869|gb|EET25283.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MO10]
gi|297534303|gb|EFH73141.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC385]
gi|297540721|gb|EFH76778.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MAK 757]
Length = 236
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 13 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 72
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 73 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 132
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 133 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGV 192
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 193 KVENIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 236
>gi|118581642|ref|YP_902892.1| ribulose-phosphate 3-epimerase [Pelobacter propionicus DSM 2379]
gi|118504352|gb|ABL00835.1| ribulose-5-phosphate 3-epimerase [Pelobacter propionicus DSM 2379]
Length = 221
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 141/218 (64%), Gaps = 2/218 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLGEEI ++ AGA +H DVMDG FVPNI+ G V+ + R +D
Sbjct: 3 KIAPSILSADFSRLGEEIRSLEAAGADYVHVDVMDGHFVPNITIGPLVVEAARRVTDLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E+ H+ R+++ I ++GK+ GVA+NP TP+
Sbjct: 63 DVHLMIENPDRYIPDFAAAGADIIVVHAEAVYHLHRTVQLIRSLGKRPGVALNPATPLQC 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
LE V+D++D++L+MTVNPGFGGQ I+ +PKI +A++ +R LEVDGGV NI
Sbjct: 123 LEYVLDDLDLVLLMTVNPGFGGQSFIDGCLPKIHALRAMLDRRGCEAELEVDGGVKISNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ AGAD+ V GS+ F + + + L + L
Sbjct: 183 AQVSHAGADVFVAGSAVFGSQDYGATIAEMKRLAREPL 220
>gi|193076498|gb|ABO11149.2| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii ATCC
17978]
Length = 228
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 149/227 (65%), Gaps = 3/227 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI+ + +AGAD+ V GS+ F Q + ++ ++D
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKAVIDQMRAELAKVGSVD 227
>gi|187925466|ref|YP_001897108.1| ribulose-phosphate 3-epimerase [Burkholderia phytofirmans PsJN]
gi|187716660|gb|ACD17884.1| Ribulose-phosphate 3-epimerase [Burkholderia phytofirmans PsJN]
Length = 238
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 140/228 (61%), Gaps = 11/228 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 12 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 71 VDVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T ++ L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I + R I LEV
Sbjct: 131 TSLSHLDYVMDKVDLVLIMSVNPGFGGQSFIPEALVKLREARKRINEYKERTGREIHLEV 190
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGGV NI + AGAD V GS+ F Q +++ +ALA
Sbjct: 191 DGGVKVDNIAEIAAAGADTFVAGSAIFGQPDHKVVIEKMR----AALA 234
>gi|209696132|ref|YP_002264062.1| ribulose-phosphate 3-epimerase [Aliivibrio salmonicida LFI1238]
gi|208010085|emb|CAQ80410.1| ribulose-phosphate 3-epimerase [Aliivibrio salmonicida LFI1238]
Length = 225
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/225 (44%), Positives = 147/225 (65%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + +GA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVDKVLASGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDSIVPEFAKAGATMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ ++D++DMIL+M+VNPGFGGQ I ST+ K+R + LI R I LE+DGGV
Sbjct: 121 TPLSCLDYILDKVDMILLMSVNPGFGGQSFIPSTLDKLRAVRKLIDDSGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI+ + +AGAD+ V GS+ FNQ Y + +++++ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFNQPN---YKEVIDEMRAELAKV 222
>gi|145638525|ref|ZP_01794134.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittII]
gi|145272120|gb|EDK12028.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittII]
gi|309750029|gb|ADO80013.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae R2866]
Length = 224
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 146/226 (64%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG ++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGNDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPD---YKQVIDQMRTQLASV 222
>gi|332976462|gb|EGK13308.1| ribulose-phosphate 3-epimerase [Desmospora sp. 8437]
Length = 225
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 133/221 (60%), Gaps = 3/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGEEI+++ +AGA IH DVMDG FVPN++ G ++ ++R +
Sbjct: 2 VKIAPSILSADFARLGEEIADVERAGADWIHVDVMDGHFVPNLTIGPLIVEAIRPRTRLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I A AG D I+ H E PH+ R+L I G K GV +NP TP
Sbjct: 62 LDVHLMIEEPDRYIPAFAQAGADWISVHQEVCPHLHRTLHLIKEQGVKAGVVLNPATPAE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---SLEVDGGVTSR 181
+L+ ++ ++D++L+MTVNPGFGGQ I + KIR+ ++ + + LEVDGGV
Sbjct: 122 VLQPILPDLDLVLLMTVNPGFGGQAFIPGVLDKIRRVHRMLEEAGLSGVELEVDGGVNPD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGA +LV GS+ F +K L +S LA
Sbjct: 182 TAAETAAAGASVLVAGSAVFGRKDRGEAISALRGGAESGLA 222
>gi|325265994|ref|ZP_08132680.1| ribulose-phosphate 3-epimerase [Kingella denitrificans ATCC 33394]
gi|324982632|gb|EGC18258.1| ribulose-phosphate 3-epimerase [Kingella denitrificans ATCC 33394]
Length = 225
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 104/220 (47%), Positives = 146/220 (66%), Gaps = 9/220 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ + AGA IHFDVMD +VPN++FG + ++LR S
Sbjct: 4 RIAPSILSADFTRLGEEVRRVIDAGADLIHFDVMDNHYVPNLTFGPMICQALRPVSTVPI 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I +AG DII+FHPE+S HI RSL+ I GK+ G+ +NP TPV +
Sbjct: 64 DVHLMVEPVDDMIRAFIEAGADIISFHPEASRHIDRSLQLIKNAGKQAGLVLNPATPVHV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE V+D++DM+L+M+VNPGFGGQ I T+ K+R+ ++L+ R I LEVDGGV
Sbjct: 124 LEHVLDKLDMVLLMSVNPGFGGQSFIPHTLDKLRRVRSLLDHYQAQTGRRIVLEVDGGVK 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + QAGAD V GS+ F Q Y + +++++
Sbjct: 184 AGNIAEIAQAGADTFVAGSAIFGQSD---YDAVIREMRQA 220
>gi|149191614|ref|ZP_01869859.1| ribulose-phosphate 3-epimerase [Vibrio shilonii AK1]
gi|148834572|gb|EDL51564.1| ribulose-phosphate 3-epimerase [Vibrio shilonii AK1]
Length = 225
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 149/226 (65%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS + A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDSIVPDFAKAGASMITFHVEASEHVDRTLQLIKEHGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ ++D++D+IL+M+VNPGFGGQ I ST+ K+R+ + I R+I LE+DGGV
Sbjct: 121 TPLSCLDYIMDKVDLILLMSVNPGFGGQSFIPSTLDKLREVRKRIDASGRNIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+ + +AGAD+ V GS+ FN+ Y + +++++ ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFNRPD---YKEVIDEMRAELAKVN 223
>gi|148827758|ref|YP_001292511.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittGG]
gi|148719000|gb|ABR00128.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittGG]
Length = 224
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F ++ Y + ++ ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKQD---YKQVIDQMRTQLASV 222
>gi|145628948|ref|ZP_01784748.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 22.1-21]
gi|144979418|gb|EDJ89104.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 22.1-21]
Length = 224
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GISAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPD---YKQVIDQMRTQLASV 222
>gi|123444146|ref|YP_001008116.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122091107|emb|CAL13990.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 225
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 98/223 (43%), Positives = 138/223 (61%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYITFHPEASEHVDRTLQLIKESGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ FNQ + + +L SA
Sbjct: 181 KVDNIRDIAAAGADMFVAGSAIFNQPDYAAVIDAMRSELAMSA 223
>gi|83593737|ref|YP_427489.1| ribulose-5-phosphate 3-epimerase [Rhodospirillum rubrum ATCC 11170]
gi|83576651|gb|ABC23202.1| ribulose-5-phosphate 3-epimerase [Rhodospirillum rubrum ATCC 11170]
Length = 228
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 142/226 (62%), Gaps = 2/226 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I+I PS+L+ADF+ LG + + GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MTRAIRIAPSLLSADFAFLGRDAQAMADGGADILHFDVMDNHYVPNLTVGPLVCAALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM +D I+ A+AG D+ITFHPE+S H+ RS++ I G K GVA+NP
Sbjct: 61 TSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
+P+++L+ +++++D++LIM+VNPGFGGQ I S +PKI + I + ++EVDGGV
Sbjct: 121 SPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALRKRIDDAGLPVAIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
N ++L AGAD+LV GS+ F + +S L +
Sbjct: 181 NPANARALGAAGADILVAGSAIFGASDRAKAIASIRGAAESGLGQE 226
>gi|84684589|ref|ZP_01012490.1| ribulose-phosphate 3-epimerase [Maritimibacter alkaliphilus
HTCC2654]
gi|84667568|gb|EAQ14037.1| ribulose-phosphate 3-epimerase [Rhodobacterales bacterium HTCC2654]
Length = 231
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 140/222 (63%), Gaps = 6/222 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT SI+I PSIL+ADF+ GEEI I GA +H DVMDG FVPN++FG +++ R
Sbjct: 1 MTFDRSIKIAPSILSADFANFGEEIRAIEAQGADWVHVDVMDGHFVPNLTFGPPAVKAFR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ +V D HLMI+ +D +I+ A+AG DI+T H E+ PH R+L+ I G K GVA+N
Sbjct: 61 PHVKTVMDVHLMIAPVDPYIDAYAEAGADILTAHIEAGPHTHRTLQAIRGAGMKAGVALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TP +E ++D D+I +MTVNPGFGGQ+ I+ T K+R+ + +IG R + +E+DGGV
Sbjct: 121 PGTPADAVEHLLDLTDLICVMTVNPGFGGQKFIDMT-AKVRRLREMIGDRPVHIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLK 217
+V+AGAD LV GS+ F Y + ++
Sbjct: 180 DPTTAPLVVEAGADALVAGSAVFKGGSVGNPDVYGDNIRAIR 221
>gi|258620500|ref|ZP_05715538.1| Ribulose-phosphate 3-epimerase [Vibrio mimicus VM573]
gi|258587379|gb|EEW12090.1| Ribulose-phosphate 3-epimerase [Vibrio mimicus VM573]
Length = 224
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 144/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 224
>gi|308069669|ref|YP_003871274.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Paenibacillus polymyxa E681]
gi|305858948|gb|ADM70736.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Paenibacillus polymyxa E681]
Length = 222
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 86/201 (42%), Positives = 124/201 (61%), Gaps = 3/201 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLG E++ GA IH DVMDG FV NI+ G +++++R ++
Sbjct: 2 LKIAPSILSADFARLGSEVAEAEAGGADWIHVDVMDGHFVSNITLGPPIVQAIRPHTTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I AG +IIT H E+ H+ L I G GVA+NP T
Sbjct: 62 LDVHLMIEHPERYIGNFVKAGANIITVHAEACVHLHGVLHLIKQQGALAGVALNPGTSPY 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTSR 181
+++V+ +DMIL+MTVNPGFGGQ I T+ KIRQ +A + + + +EVDGG+
Sbjct: 122 AIKEVLPNVDMILVMTVNPGFGGQSFIPETLNKIRQIRAWLNELGRPDVHIEVDGGIAEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFN 202
++ +AGAD+LV GS+ F
Sbjct: 182 TAPAVFEAGADVLVAGSAVFG 202
>gi|262273419|ref|ZP_06051233.1| ribulose-phosphate 3-epimerase [Grimontia hollisae CIP 101886]
gi|262222397|gb|EEY73708.1| ribulose-phosphate 3-epimerase [Grimontia hollisae CIP 101886]
Length = 224
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 98/217 (45%), Positives = 137/217 (63%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S HI RSL+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHAEASEHIDRSLQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ V+D++DMIL+M+VNPGFGGQ I T+ K+R+ + I + R I LE+DGGV
Sbjct: 121 TPLHYLDHVMDKLDMILLMSVNPGFGGQSFIPETLNKLREVRRRIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + +AGAD+ V GS+ F Q + +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPDYKAVIDEMRA 217
>gi|312882790|ref|ZP_07742524.1| ribulose-phosphate 3-epimerase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369574|gb|EFP97092.1| ribulose-phosphate 3-epimerase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 223
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/219 (46%), Positives = 143/219 (65%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+AD +RLGE++ + AGA IHFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADMARLGEDVEKVLSAGADVIHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMAKPVDRLIPDFAKAGASMITFHIEASEHVDRTLQLIKECGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE ++D +D+IL+M+VNPGFGGQ I ST+ K+R + LI + R+I LEVDGGV
Sbjct: 121 TPLSSLEYIMDRLDLILLMSVNPGFGGQSFIPSTLDKLRSVRRLIEQSGRNIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NIK + +AGAD+ V GS+ F+Q Y + ++ ++
Sbjct: 181 KIDNIKEIAEAGADMFVAGSAIFDQPD---YKQVIDQMR 216
>gi|157148969|ref|YP_001456288.1| ribulose-phosphate 3-epimerase [Citrobacter koseri ATCC BAA-895]
gi|157086174|gb|ABV15852.1| hypothetical protein CKO_04807 [Citrobacter koseri ATCC BAA-895]
Length = 225
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRKYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPHTLEKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|91785316|ref|YP_560522.1| ribulose-phosphate 3-epimerase [Burkholderia xenovorans LB400]
gi|296159461|ref|ZP_06842285.1| ribulose-phosphate 3-epimerase [Burkholderia sp. Ch1-1]
gi|91689270|gb|ABE32470.1| ribulose-5-phosphate 3-epimerase [Burkholderia xenovorans LB400]
gi|295890169|gb|EFG69963.1| ribulose-phosphate 3-epimerase [Burkholderia sp. Ch1-1]
Length = 227
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 138/228 (60%), Gaps = 11/228 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VDVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T + L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEV
Sbjct: 120 TSLNYLDHVMDKVDLVLIMSVNPGFGGQSFIPEALNKLREARQRINAYTERTGREIHLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGGV NI + AGAD V GS+ F Q +++ +ALA
Sbjct: 180 DGGVKVDNIAEIAAAGADTFVAGSAIFGQPDHKVVIEKMR----AALA 223
>gi|238763774|ref|ZP_04624733.1| Ribulose-phosphate 3-epimerase [Yersinia kristensenii ATCC 33638]
gi|238698076|gb|EEP90834.1| Ribulose-phosphate 3-epimerase [Yersinia kristensenii ATCC 33638]
Length = 225
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLG++ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGDDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ F+Q S + +L KSA
Sbjct: 181 KVDNIRDIAAAGADMFVAGSAIFSQPDYKSVIDAMRSELAKSA 223
>gi|226953577|ref|ZP_03824041.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter sp. ATCC 27244]
gi|226835671|gb|EEH68054.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter sp. ATCC 27244]
Length = 228
Score = 278 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 103/218 (47%), Positives = 146/218 (66%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++L+SY
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAHICKALKSY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE++ HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVSPVDRMIGDFLEAGADIITFHPEATEHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+RQA+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLDKLRQARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + +AGAD+ V GS+ F Q + ++
Sbjct: 181 VGPANIREVAEAGADMFVAGSAIFGQADYKTVIDQMRA 218
>gi|295097002|emb|CBK86092.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 225
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 142/225 (63%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V+++LR+Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD+ V GS+ F+Q Y K ++++++ +
Sbjct: 181 KVNNIGEIAAAGADMFVAGSAIFDQPD---YKKVIDEMRRELAKV 222
>gi|323494818|ref|ZP_08099915.1| ribulose-phosphate 3-epimerase [Vibrio brasiliensis LMG 20546]
gi|323310926|gb|EGA64093.1| ribulose-phosphate 3-epimerase [Vibrio brasiliensis LMG 20546]
Length = 223
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ + A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDNIVPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE ++D++DMIL+M+VNPGFGGQ I +T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLSHLEYIMDKVDMILLMSVNPGFGGQSFIPNTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NIK + +AGAD+ V GS+ FNQ Y + ++ ++ ++
Sbjct: 181 KVDNIKEIAEAGADMFVAGSAIFNQPD---YKEVIDQMRAELAKVN 223
>gi|262170126|ref|ZP_06037815.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC27]
gi|262021534|gb|EEY40246.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC27]
Length = 224
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 181 KVENIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 224
>gi|89895429|ref|YP_518916.1| hypothetical protein DSY2683 [Desulfitobacterium hafniense Y51]
gi|89334877|dbj|BAE84472.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 232
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 146/218 (66%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG++++ + KAGA+ +H DVMDG FVPNI+ G V+++LR YS
Sbjct: 10 IKIAPSILSADFAHLGDQVALVEKAGAEVLHIDVMDGHFVPNITIGPLVVKALRPYSQMR 69
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + I A AG D IT H E++PHI R+++ I +G GV+INP TP+
Sbjct: 70 FDVHLMIEHPERFIEEFAKAGADHITVHLEATPHIHRAIQQIKGLGLTAGVSINPATPLD 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ ++DE+DM+LIM+VNPGFGGQ+ I + +PKI + + S +EVDGG+
Sbjct: 130 GIKYILDELDMVLIMSVNPGFGGQKFIPAVLPKIEVLHRHLDQMQSSCEIEVDGGINLDT 189
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++V+AGA++LV G++ F A+ + +L+++A
Sbjct: 190 APAVVKAGANILVAGAAVFACADP---ARAVQELREAA 224
>gi|255744408|ref|ZP_05418360.1| ribulose-phosphate 3-epimerase [Vibrio cholera CIRS 101]
gi|262158479|ref|ZP_06029594.1| ribulose-phosphate 3-epimerase [Vibrio cholerae INDRE 91/1]
gi|262190839|ref|ZP_06049061.1| ribulose-phosphate 3-epimerase [Vibrio cholerae CT 5369-93]
gi|255737933|gb|EET93326.1| ribulose-phosphate 3-epimerase [Vibrio cholera CIRS 101]
gi|262029640|gb|EEY48289.1| ribulose-phosphate 3-epimerase [Vibrio cholerae INDRE 91/1]
gi|262033288|gb|EEY51804.1| ribulose-phosphate 3-epimerase [Vibrio cholerae CT 5369-93]
gi|327485105|gb|AEA79512.1| Ribulose-phosphate 3-epimerase [Vibrio cholerae LMA3894-4]
Length = 224
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 181 KVENIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 224
>gi|145633478|ref|ZP_01789207.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 3655]
gi|229846656|ref|ZP_04466764.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 7P49H1]
gi|144985847|gb|EDJ92455.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 3655]
gi|229810749|gb|EEP46467.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 7P49H1]
Length = 224
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 143/225 (63%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F + ++ S A
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKQVIDQIRTQLASVSA 224
>gi|262170439|ref|ZP_06038117.1| ribulose-phosphate 3-epimerase [Vibrio mimicus MB-451]
gi|261891515|gb|EEY37501.1| ribulose-phosphate 3-epimerase [Vibrio mimicus MB-451]
Length = 224
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 144/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPNYQAVIEQMRAELAKAKI 224
>gi|149201187|ref|ZP_01878162.1| Pentose-5-phosphate-3-epimerase [Roseovarius sp. TM1035]
gi|149145520|gb|EDM33546.1| Pentose-5-phosphate-3-epimerase [Roseovarius sp. TM1035]
Length = 233
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 139/214 (64%), Gaps = 3/214 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T SI+I PSIL+ADF+ G EI I G +H DVMDG FVPN++FG + ++R +
Sbjct: 4 TRSIKIAPSILSADFANFGAEIRAIEAEGCDWVHVDVMDGHFVPNLTFGPPLCAAIRPHI 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLMIS +D +I+ A AG D++T H E+ PHI R+L+ I G K G+A+NP T
Sbjct: 64 KTVMDVHLMISPVDPYIDAFAQAGADVLTAHLEAGPHIHRTLQAIRGAGCKAGLALNPGT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +E ++D +D+I +MTVNPGFGGQ+ I S I K+++ +A+IG R I +E+DGG+T++
Sbjct: 124 GIDAVEHLLDMVDLICVMTVNPGFGGQKFIHSQIDKVKRLRAMIGDRPIHIEIDGGITTQ 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQ---KGEISYAKR 212
+ AGAD+LV GS+ F Y +
Sbjct: 184 TAPLMAAAGADVLVAGSAVFKGGSVDNPGVYGEN 217
>gi|218778412|ref|YP_002429730.1| Ribulose-phosphate 3-epimerase [Desulfatibacillum alkenivorans
AK-01]
gi|218759796|gb|ACL02262.1| Ribulose-5-phosphate-epimerase [Desulfatibacillum alkenivorans
AK-01]
Length = 219
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 134/217 (61%), Gaps = 2/217 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+RLGEE+ + KAGA IH DVMDG FVPNI+ G V +++ +D
Sbjct: 3 IIAPSILSADFARLGEEVQAVEKAGADWIHVDVMDGRFVPNITIGPVVCKAVNRVTDLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ AG D IT ES+ H+ R++ I +G K GV +NP TP++
Sbjct: 63 DVHLMIKQPELYVEDFVKAGADYITIQVESTTHLNRTVNLIRELGAKPGVVLNPTTPLSS 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE V++ +D++++M+VNPGFGGQ+ I++++ K + +I + ++ +E+DGG+ S+ I
Sbjct: 123 LEWVLEYVDLVMLMSVNPGFGGQKFIDNSLRKTEELANMIQSKGLNALIELDGGINSKTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
KS AG D V GS+ F + + K L A
Sbjct: 183 KSASDAGCDAFVAGSAIFGSEDYTATIKEFRTLLGEA 219
>gi|86141298|ref|ZP_01059844.1| ribulose-phosphate 3-epimerase [Leeuwenhoekiella blandensis MED217]
gi|85831857|gb|EAQ50312.1| ribulose-phosphate 3-epimerase [Leeuwenhoekiella blandensis MED217]
Length = 219
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + PSILAADF+ L EI + + A +H DVMDG FVPNISFG V++++ +
Sbjct: 1 MTPKY-VAPSILAADFANLESEIKMVNSSDADWLHVDVMDGVFVPNISFGMPVVQAISKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ V D HLMI D +I A G + +T H E+ H+ R+L+ I A G K GVA+NP
Sbjct: 60 NKKVMDVHLMIVDPDRYIKTFAQLGSNNLTVHYEACTHLHRTLQAIKAEGMKAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV++L+DVI++ID ++IM+VNPGFGGQ IE+T K+R+ K +I + +E+DGGV
Sbjct: 120 TPVSLLKDVINDIDQVIIMSVNPGFGGQSFIENTYKKVRELKEIILTHNASTRIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
T N + L+ GAD+LV GS F ++ + L L
Sbjct: 180 TDANAQELINCGADVLVAGSYIFKASDPVNTIENLKKL 217
>gi|118340552|gb|ABK80602.1| putative ribulose-phosphate 3-epimerase [uncultured marine
Nitrospinaceae bacterium]
Length = 221
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 143/217 (65%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSILA+DFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R ++
Sbjct: 8 VIVAPSILASDFSRLGDEVKAVEHAGADWIHIDVMDGHFVPNITIGPSVVEAIRKVTELP 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D++I AG DIIT H E+ PH+ R+++ I GV +NP TP++
Sbjct: 68 LDVHLMIENADNYIGEFISAGSDIITVHVEACPHLNRTIQLIKDQDIMAGVVLNPATPLS 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
LE+++ EID++L+M+VNPGFGGQ+ I S + KI+ + + I+LEVDGG+TS N
Sbjct: 128 SLEEILHEIDIVLLMSVNPGFGGQKFIPSMLDKIQNLSEITSHYENPIALEVDGGITSEN 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+VQAGA +LV GS+ FN K Y K + L++S
Sbjct: 188 AGDIVQAGASVLVAGSAVFNSKD---YKKAIYSLRQS 221
>gi|110800106|ref|YP_696422.1| ribulose-phosphate 3-epimerase [Clostridium perfringens ATCC 13124]
gi|110674753|gb|ABG83740.1| ribulose-phosphate 3-epimerase [Clostridium perfringens ATCC 13124]
Length = 217
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 147/214 (68%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSVDMVLIMSVNPGFGGQSFIPYSLNKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIK +V+AGA++LV GS+ F + K L +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKEDKIEENIKALRE 215
>gi|478182|pir||F47019 ribulose-phosphate 3-epimerase (EC 5.1.3.1) - Alcaligenes eutrophus
plasmid pHG1
Length = 241
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 144/225 (64%), Gaps = 7/225 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+I++ PSIL+ADF+RLGEE+ I GA +HFDVMD +VPN++ G V ++R
Sbjct: 14 RAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPLVS 73
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D+ I + A AG ++I+FHPE+S H+ R++ I G K G+ +NP TP
Sbjct: 74 IPIDVHLMVEPVDALIPMFAKAGANLISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATP 133
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDG 176
++ L+ +D++D++L+M+VNPGFGGQ I + K+RQA+A I + R + LE+DG
Sbjct: 134 LSWLDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVAAGGRPVWLEIDG 193
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSA 220
GV + NI + +AGAD V GS+ F + Y L+ L+++A
Sbjct: 194 GVKADNITEIARAGADTFVAGSAVFGAPDADGGYRGILHRLREAA 238
>gi|116749384|ref|YP_846071.1| ribulose-phosphate 3-epimerase [Syntrophobacter fumaroxidans MPOB]
gi|116698448|gb|ABK17636.1| ribulose-5-phosphate 3-epimerase [Syntrophobacter fumaroxidans
MPOB]
Length = 229
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 134/219 (61%), Gaps = 5/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++ SIL+ADF +L EE+ + +AG IH DVMDG FVPNI+ G DV++++R +
Sbjct: 11 KRKSKLSASILSADFGKLAEEVKAVERAGTDWIHVDVMDGHFVPNITIGPDVVKAIRGVT 70
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + +I AG + H E SPH+ R+++ I +G + V +NP T
Sbjct: 71 ALPLDVHLMIEKPERYIEAFIRAGAHYLGVHAEVSPHLHRTVQRIRELGARPVVTLNPST 130
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P+ +EDV+ +IDM+L+MTVNPGFGGQ+ I S +PKIR+ + +I + + LEVDGGV
Sbjct: 131 PLCAVEDVLGDIDMVLLMTVNPGFGGQKFIPSMLPKIRRCREMIDESRLPVLLEVDGGVN 190
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I LV AG D+ V GS+ F YA+ +N L +
Sbjct: 191 RGTIDDLVDAGVDVFVAGSAVFAGND---YARNVNGLVE 226
>gi|50123009|ref|YP_052176.1| ribulose-phosphate 3-epimerase [Pectobacterium atrosepticum
SCRI1043]
gi|49613535|emb|CAG76986.1| ribulose-phosphate 3-epimerase [Pectobacterium atrosepticum
SCRI1043]
Length = 225
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 141/218 (64%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTTNVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI + EVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI ++ +AGAD+ V GS+ F + ++ +
Sbjct: 180 VKVENIGAIAEAGADMFVAGSAIFGHPDYRAVIDQMRN 217
>gi|52426385|ref|YP_089522.1| ribulose-phosphate 3-epimerase [Mannheimia succiniciproducens
MBEL55E]
gi|52308437|gb|AAU38937.1| Rpe protein [Mannheimia succiniciproducens MBEL55E]
Length = 224
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 103/225 (45%), Positives = 145/225 (64%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S I PSIL+AD +RLGE++ N+ KAGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKSYLIAPSILSADLARLGEDVENVLKAGADVIHFDVMDNHYVPNLTFGPAVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG D ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRLIPDFAKAGADYITFHPEASEHIDRSLQLIRNSGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T ++ L+ V+D+ID+IL+M+VNPGFGGQ I +T+ K+++A+ I + + EVDGGV
Sbjct: 121 TSLSYLDYVMDKIDVILLMSVNPGFGGQSFIPATMQKLQEARRRIDESGFDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD+ V GS+ F+Q Y K +N++++ +
Sbjct: 181 KINNIAEIAAAGADMFVAGSAIFDQPD---YRKVINEMRQELAKV 222
>gi|309972283|gb|ADO95484.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae R2846]
Length = 224
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 145/226 (64%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG ++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGNDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITEPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F + Y + ++ ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPD---YKQVIDQMRTQLASV 222
>gi|229521691|ref|ZP_04411109.1| ribulose-phosphate 3-epimerase [Vibrio cholerae TM 11079-80]
gi|229341285|gb|EEO06289.1| ribulose-phosphate 3-epimerase [Vibrio cholerae TM 11079-80]
Length = 233
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 10 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 69
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 70 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 129
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 130 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGV 189
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 190 KVENIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 233
>gi|229507323|ref|ZP_04396828.1| ribulose-phosphate 3-epimerase [Vibrio cholerae BX 330286]
gi|229509753|ref|ZP_04399234.1| ribulose-phosphate 3-epimerase [Vibrio cholerae B33]
gi|229513548|ref|ZP_04403012.1| ribulose-phosphate 3-epimerase [Vibrio cholerae TMA 21]
gi|229516878|ref|ZP_04406324.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC9]
gi|229527446|ref|ZP_04416838.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 12129(1)]
gi|229606829|ref|YP_002877477.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MJ-1236]
gi|229335078|gb|EEO00563.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 12129(1)]
gi|229345941|gb|EEO10913.1| ribulose-phosphate 3-epimerase [Vibrio cholerae RC9]
gi|229349425|gb|EEO14381.1| ribulose-phosphate 3-epimerase [Vibrio cholerae TMA 21]
gi|229353227|gb|EEO18166.1| ribulose-phosphate 3-epimerase [Vibrio cholerae B33]
gi|229354828|gb|EEO19749.1| ribulose-phosphate 3-epimerase [Vibrio cholerae BX 330286]
gi|229369484|gb|ACQ59907.1| ribulose-phosphate 3-epimerase [Vibrio cholerae MJ-1236]
Length = 233
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 10 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 69
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 70 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 129
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 130 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGV 189
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 190 KVENIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 233
>gi|323498125|ref|ZP_08103129.1| ribulose-phosphate 3-epimerase [Vibrio sinaloensis DSM 21326]
gi|323316836|gb|EGA69843.1| ribulose-phosphate 3-epimerase [Vibrio sinaloensis DSM 21326]
Length = 223
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 146/226 (64%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADMARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE +ID++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLSHLEYIIDKVDMILLMSVNPGFGGQSFIPKTLDKLRAVRQMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NIK + +AGAD+ V GS+ FNQ Y + +++++ ++
Sbjct: 181 KVENIKEIAEAGADMFVAGSAIFNQPD---YKQVIDEMRAELAKVN 223
>gi|329938918|ref|ZP_08288292.1| ribulose-phosphate 3-epimerase [Streptomyces griseoaurantiacus
M045]
gi|329301803|gb|EGG45696.1| ribulose-phosphate 3-epimerase [Streptomyces griseoaurantiacus
M045]
Length = 228
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 134/221 (60%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFARLAEEARAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGASSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LIGK + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLIGKHGLDLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + + + L ++ A
Sbjct: 180 TIERCAEAGADVFVAGSAVYGAEDPAAAVRALRAQAENVTA 220
>gi|317404600|gb|EFV85004.1| ribulose-phosphate 3-epimerase [Achromobacter xylosoxidans C54]
Length = 239
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 139/221 (62%), Gaps = 6/221 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 9 MSTTTRITPSILSADFARLGEEVRDVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPH 68
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D+ + + A AG + I+FHPE+S H+ R+L I G K G+ NP
Sbjct: 69 VSVPIDVHLMVEPVDALVPMFAKAGANYISFHPEASRHVDRTLSLIRENGCKAGLVFNPA 128
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP++ L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+A I I L+V
Sbjct: 129 TPLSYLDHVMDKVDLVLIMSVNPGFGGQSFIPGALAKLREARARIDAWTQAGGHEIVLQV 188
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGGV NI + +AGAD V GS+ F + K + +
Sbjct: 189 DGGVKIDNIAEIRRAGADTFVAGSAIFGKPDYPGIIKSMRE 229
>gi|307300212|ref|ZP_07579997.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti BL225C]
gi|306905101|gb|EFN35684.1| ribulose-phosphate 3-epimerase [Sinorhizobium meliloti BL225C]
Length = 228
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 107/209 (51%), Positives = 144/209 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PS+L+ADFSRLGEE+ + +AGA IH DVMDG FVPNI+FG VI++LR
Sbjct: 1 MNEKTIIAPSVLSADFSRLGEEVEAVCRAGADWIHLDVMDGHFVPNITFGPPVIKALRDR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFDCHLMI ++ A AGCDIIT H E++ H+ RSL+ I +G K GV++NP
Sbjct: 61 TDKVFDCHLMIEPPTPYLGAFACAGCDIITVHAEATTHLDRSLQAIRDVGCKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +++E V+D +D++L+MTVNPGFGGQ I + + K+R+ K++IG R I +E+DGGVT
Sbjct: 121 TPESVIEYVLDRLDLVLLMTVNPGFGGQDFIPAVVDKVRRVKSMIGGRPIHIEIDGGVTP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ AGAD+LV GS+ F E Y
Sbjct: 181 ETAPLVAAAGADVLVAGSAVFKGGSEEHY 209
>gi|300718761|ref|YP_003743564.1| Ribulose-phosphate 3-epimerase [Erwinia billingiae Eb661]
gi|299064597|emb|CAX61717.1| Ribulose-phosphate 3-epimerase [Erwinia billingiae Eb661]
Length = 228
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 137/219 (62%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y
Sbjct: 1 MKQFLLAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG ITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRLIPDFAKAGASYITFHPEASEHVDRSLQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T ++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + + EVDGGV
Sbjct: 121 TSLSYLDYVMDKVDVILLMSVNPGFGGQSFIPGTLDKLRQVRKLIDQSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F G+ Y K ++D++
Sbjct: 181 KVENIAEIADAGADMFVAGSAIF---GKADYKKVIDDMR 216
>gi|153003321|ref|YP_001377646.1| ribulose-phosphate 3-epimerase [Anaeromyxobacter sp. Fw109-5]
gi|152026894|gb|ABS24662.1| Ribulose-phosphate 3-epimerase [Anaeromyxobacter sp. Fw109-5]
Length = 230
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 95/210 (45%), Positives = 136/210 (64%), Gaps = 2/210 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I+I PSIL+ADF RL EE+ I AGA +H DVMDG FVPNI+ G V+ ++R +
Sbjct: 4 PPIRIAPSILSADFGRLAEEVRAIEAAGADVVHVDVMDGRFVPNITIGPLVVEAVRKVTK 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A AG D+++ H E+SPH+ R+L+ I A G + VA+NP TP
Sbjct: 64 LPIDVHLMIVEPERYVEAFAKAGADLLSVHAEASPHLHRTLQAIRAAGARPAVALNPSTP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
++ +E VI+E +M+L+MTVNPGFGGQ+ IE+ K+RQ +AL R+ + +EVDGGV +
Sbjct: 124 LSAVEWVIEECEMVLVMTVNPGFGGQRYIEACTDKLRQLRALADARNPSLEIEVDGGVNA 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ AGA+LLV G++ F +
Sbjct: 184 ERAGLVAGAGANLLVAGTAVFGAPDYRAAI 213
>gi|88812492|ref|ZP_01127741.1| Ribulose-phosphate 3-epimerase [Nitrococcus mobilis Nb-231]
gi|88790278|gb|EAR21396.1| Ribulose-phosphate 3-epimerase [Nitrococcus mobilis Nb-231]
Length = 224
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 142/223 (63%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++ PSIL+A+F+RLG+E+ + AGA +HFDVMD +VPN++ G V ++LR
Sbjct: 1 MRDFKVAPSILSANFARLGDEVRRVLDAGADMVHFDVMDNHYVPNLTIGPVVCKALRDEG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ + A AG ITFHPE+S H+ R+L+ I G + G+ NP
Sbjct: 61 ITADIDVHLMVKPVDNIVPAFAKAGASWITFHPEASEHVDRTLQLIRDNGCRAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TP+ L V+D++DM+LIM+VNPGFGGQ I S + K+R+A++LI +R I LE+DGG+
Sbjct: 121 TPLDYLRYVLDKVDMVLIMSVNPGFGGQAFIPSALDKLREARSLIDASQRPIRLEIDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
+ NI++ +AGAD V GS+ F + + +L K+A
Sbjct: 181 KTDNIRAAAEAGADTFVAGSAIFGVEDYQQVISEMRAELAKAA 223
>gi|327479290|gb|AEA82600.1| ribulose-phosphate 3-epimerase [Pseudomonas stutzeri DSM 4166]
Length = 224
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 105/225 (46%), Positives = 146/225 (64%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+A+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MQP-FAIAPSILSANFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVKPVDRMIGDFLEAGATYITFHPEASEHIDRSLQLIKDGGAKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V +NI+ + AGAD V GS+ FNQ + ++ + ALA
Sbjct: 180 VNPKNIREIAAAGADTFVAGSAIFNQPDYKAVIDQMR--AELALA 222
>gi|269925408|ref|YP_003322031.1| ribulose-phosphate 3-epimerase [Thermobaculum terrenum ATCC
BAA-798]
gi|269789068|gb|ACZ41209.1| ribulose-phosphate 3-epimerase [Thermobaculum terrenum ATCC
BAA-798]
Length = 232
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 89/219 (40%), Positives = 137/219 (62%), Gaps = 5/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++I PSIL+ADF+RLGE++ AGA IH+DVMDG FVPNIS G + +++ +
Sbjct: 8 KLKIAPSILSADFTRLGEQVQEAEAAGADYIHYDVMDGHFVPNISMGPYIAEAVKRSTSL 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D +I AG DIIT H E+ H+ R++ I +G K GVAINP TP
Sbjct: 68 PLDVHLMIEDPDRYIPDFVSAGADIITVHYEAVVHLHRTVMRIRDLGAKAGVAINPSTPP 127
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
+L++++ +++IL+M+VNPGFGGQ I +++ K+++ + +I R + EVDGG+
Sbjct: 128 FMLDEILPFVNLILVMSVNPGFGGQHFIPTSLQKLKRLRMMIDDRRYDIELEVDGGIDPN 187
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +GA +LV GS+ F Q S + + +++SA
Sbjct: 188 TAEPVAASGARVLVAGSAIFGQG---SIEENIRAIRESA 223
>gi|74318248|ref|YP_315988.1| ribulose-5-phosphate 3-epimerase [Thiobacillus denitrificans ATCC
25259]
gi|74057743|gb|AAZ98183.1| ribulose-phosphate 3-epimerase [Thiobacillus denitrificans ATCC
25259]
Length = 227
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 133/226 (58%), Gaps = 6/226 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
+ +I PSIL+A+F+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 2 TYRIAPSILSANFARLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGVT 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ +D I A AG ITFHPE+S HI R++ I G K G+ NP TP
Sbjct: 62 APIDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHIDRTIGLIKENGCKAGLVFNPATP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ +LE +D++DM+L+M+VNPGFGGQ+ I + K R + +I R + LE+DGGV
Sbjct: 122 LDVLEYTLDKLDMVLLMSVNPGFGGQKFIPYVLDKARAVRKMIDDRGLDVSLEIDGGVGP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSALAI 223
NI + +AG D V GS+ F Y + ++ +
Sbjct: 182 ANIAEVARAGVDTFVAGSAVFGAAKEGDPQRYNSIIAAMRAELAKV 227
>gi|220928960|ref|YP_002505869.1| ribulose-phosphate 3-epimerase [Clostridium cellulolyticum H10]
gi|219999288|gb|ACL75889.1| ribulose-phosphate 3-epimerase [Clostridium cellulolyticum H10]
Length = 222
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS LG EI I K GA IH DVMDG FVPNI+ G V++ LR Y+D
Sbjct: 2 IKIAPSILSADFSCLGSEIEKIDKNGADIIHIDVMDGHFVPNITIGPGVVKCLRKYTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+S+ D +I A AG DIIT H E++ H+ R+++ I GKK GVA+NP TP+
Sbjct: 62 FDVHLMVSNPDEYIEQFAQAGADIITVHAEATKHLNRTIQIIKNCGKKAGVALNPATPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+ V+ ++DM+LIMTVNPGFGGQ + + KI K ++ + ++ +EVDGG+ N
Sbjct: 122 VLDFVLQDVDMVLIMTVNPGFGGQSYLPHSTKKISDLKNMMIRNTLVADIEVDGGIDVNN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + +AGA+++V GS+ F Q + L
Sbjct: 182 INVVTKAGANVIVAGSAVFKQDNVGEAIRSLK 213
>gi|219669859|ref|YP_002460294.1| ribulose-phosphate 3-epimerase [Desulfitobacterium hafniense DCB-2]
gi|219540119|gb|ACL21858.1| Ribulose-phosphate 3-epimerase [Desulfitobacterium hafniense DCB-2]
Length = 224
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 146/218 (66%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG++++ + KAGA+ +H DVMDG FVPNI+ G V+++LR YS
Sbjct: 2 IKIAPSILSADFAHLGDQVALVEKAGAEVLHIDVMDGHFVPNITIGPLVVKALRPYSQMR 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + I A AG D IT H E++PHI R+++ I +G GV+INP TP+
Sbjct: 62 FDVHLMIEHPERFIEEFAKAGADHITVHLEATPHIHRAIQQIKGLGLTAGVSINPATPLD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ ++DE+DM+LIM+VNPGFGGQ+ I + +PKI + + S +EVDGG+
Sbjct: 122 GIKYILDELDMVLIMSVNPGFGGQKFIPAVLPKIEVLHRHLDQMQSSCEIEVDGGINLDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++V+AGA++LV G++ F A+ + +L+++A
Sbjct: 182 APAVVKAGANILVAGAAVFACADP---ARAVQELREAA 216
>gi|298530757|ref|ZP_07018159.1| ribulose-phosphate 3-epimerase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510131|gb|EFI34035.1| ribulose-phosphate 3-epimerase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 225
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 136/219 (62%), Gaps = 5/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + PS+LA+DFS L E+S + +AG +H+DVMDG FVPNI+FG +I R S
Sbjct: 6 ELILSPSLLASDFSNLAGELSALEEAGLTWVHWDVMDGSFVPNITFGPPIIAGCRKKSRL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI D ++ AG D++ H E+ H+ R+L I +G + VA+NP TP+
Sbjct: 66 FFDVHLMIEEPDRYLEDFVRAGADLLCVHAEACRHLERTLSEIARLGARPAVALNPHTPL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ILE V+ +DM+LIM+VNPGFGGQ+ I ++ KIR+ K++I R ++VDGGVT
Sbjct: 126 EILEYVLPRLDMVLIMSVNPGFGGQKFIPFSMEKIRRLKSMIAARDCKTLIQVDGGVTPE 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N LVQ GAD+LV GS+FF Y +RL +A
Sbjct: 186 NTGELVQCGADVLVSGSAFFAHP---PYRERLKTFINAA 221
>gi|320181873|gb|EFW56779.1| Ribulose-phosphate 3-epimerase [Shigella boydii ATCC 9905]
Length = 224
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVLDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|313679674|ref|YP_004057413.1| ribulose-5-phosphate 3-epimerase [Oceanithermus profundus DSM
14977]
gi|313152389|gb|ADR36240.1| ribulose-5-phosphate 3-epimerase [Oceanithermus profundus DSM
14977]
Length = 219
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 92/218 (42%), Positives = 137/218 (62%), Gaps = 4/218 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +++ AGA IH DVMDG FVPNI+ G V+ +LR + D
Sbjct: 4 IAPSILSADFARLADQVRAAEAAGADWIHVDVMDGRFVPNITMGFVVVEALRPVTRLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ AG D++T H E++ H+ R+L+ I + G + G+A+NP TP+
Sbjct: 64 VHLMIVEPERYVERFVAAGADVVTVHVEATAHVHRTLQLIRSAGARAGLAVNPATPLDWF 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
EDV+ E+D+ L+M+VNPGFGGQ+ I ++ ++ + AL + +EVDGGV N
Sbjct: 124 EDVLGELDLALLMSVNPGFGGQRFIPRSLERLERLAALRDRVNPEARIEVDGGVGPGNAA 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
LV+ GAD+LV GS+ F G + A+ L+ L+ +A A
Sbjct: 184 ELVRRGADVLVAGSAVFGGDGTV--AENLSALRDAAQA 219
>gi|168207263|ref|ZP_02633268.1| ribulose-phosphate 3-epimerase [Clostridium perfringens E str.
JGS1987]
gi|170661353|gb|EDT14036.1| ribulose-phosphate 3-epimerase [Clostridium perfringens E str.
JGS1987]
Length = 217
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 148/214 (69%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPERYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIAYSLDKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIK +V+AGA++LV GS+ F + K L +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKEDKIEENIKALRE 215
>gi|319942232|ref|ZP_08016548.1| hypothetical protein HMPREF9464_01767 [Sutterella wadsworthensis
3_1_45B]
gi|319804285|gb|EFW01177.1| hypothetical protein HMPREF9464_01767 [Sutterella wadsworthensis
3_1_45B]
Length = 229
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 145/228 (63%), Gaps = 7/228 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V++++R Y
Sbjct: 1 MRTCRIAPSILSADFARLGEEVRDVAAAGADWIHFDVMDNHYVPNLTVGPLVLKAIRPYV 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI +D+ + +AG DIITFH E++ H+ R+L+ I G K G+ NP T
Sbjct: 61 SIPIDVHLMIEPVDALVPSFIEAGADIITFHCEATKHVDRTLQLIRKGGVKAGLVFNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+ L+ +D+ID++L+M+VNPGFGGQ IESTI K+ + + + R I+LEVD
Sbjct: 121 PLDYLDYELDQIDVVLLMSVNPGFGGQSFIESTIEKLARVREKLDAYKAQTGREIALEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
GGV NI + AGAD V GS+ F YA+ + +K SA+A+
Sbjct: 181 GGVKPANIARIAAAGADTFVAGSAVFGAGSAQGYAEVIRSMK-SAVAV 227
>gi|254461896|ref|ZP_05075312.1| ribulose-phosphate 3-epimerase [Rhodobacterales bacterium HTCC2083]
gi|206678485|gb|EDZ42972.1| ribulose-phosphate 3-epimerase [Rhodobacteraceae bacterium
HTCC2083]
Length = 225
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 141/220 (64%), Gaps = 4/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
S++I PSIL+A+F+ G EI + GA IH DVMDG FVPN+SFGA ++R +
Sbjct: 5 RSVKIAPSILSANFANFGAEIEAVEAQGADWIHVDVMDGHFVPNLSFGATTCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
++ D HLMIS +D++I+ A+AG D IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 TMMDVHLMISPVDAYIDGFAEAGADFITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +E ++D D+I +MTVNPGFGGQ+ I PKI + +A+IG R + +E+DGGVT
Sbjct: 125 ASAVEHLLDICDLICVMTVNPGFGGQKFIPLA-PKIAELRAMIGDRPVHIEIDGGVTPDT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKS 219
KS V AGAD+LV GS+ F Y + ++ S
Sbjct: 184 AKSCVDAGADVLVAGSAVFKGGSVSNPAPYGDNIRAIRAS 223
>gi|308048050|ref|YP_003911616.1| ribulose-5-phosphate 3-epimerase [Ferrimonas balearica DSM 9799]
gi|307630240|gb|ADN74542.1| ribulose-5-phosphate 3-epimerase [Ferrimonas balearica DSM 9799]
Length = 224
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 147/222 (66%), Gaps = 6/222 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I PSIL+ADF+RLGEE++N+ AGA +HFDVMD +VPN++ G V ++LR+Y ++
Sbjct: 4 FLIAPSILSADFARLGEEVANVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRNYGIEA 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG IITFHPE+S H+ R+L+ I + G + G+ +NP TP+
Sbjct: 64 PIDVHLMVKPVDRIIPDFAKAGASIITFHPEASEHVDRTLQLIKSEGCQAGLVLNPATPL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L+ V+D++D+IL+M+VNPGFGGQ I T+ KIRQ + I R+I LE+DGGV +
Sbjct: 124 HHLDYVMDKLDVILLMSVNPGFGGQSFIPHTLDKIRQVRERIDASGRNIRLEIDGGVKAD 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD+ V GS+ F + Y ++ +++ ++
Sbjct: 184 NIAEIAAAGADMFVAGSAIFGKPD---YKAEIDKMREQLASV 222
>gi|291619217|ref|YP_003521959.1| Rpe [Pantoea ananatis LMG 20103]
gi|291154247|gb|ADD78831.1| Rpe [Pantoea ananatis LMG 20103]
Length = 231
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 142/224 (63%), Gaps = 9/224 (4%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M ++ + PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++L
Sbjct: 1 MENRMKQYLLAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKAL 60
Query: 58 RSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
R Y + D HLM+ +D+ I A AG ITFHPE+S H+ R+L+ I G K G+
Sbjct: 61 RDYGITAPIDVHLMVKPVDALIPEFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGLV 120
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEV 174
NP TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + SI LEV
Sbjct: 121 FNPATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLREARKRIDQSGYSIRLEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
DGGV NI + AGAD+ V GS+ F Y K ++D++
Sbjct: 181 DGGVKIDNIGQIAAAGADMFVAGSAIFGHPD---YKKVIDDMRN 221
>gi|254508173|ref|ZP_05120298.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus 16]
gi|219548895|gb|EED25895.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus 16]
Length = 223
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 145/226 (64%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADMARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEYGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE +ID++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLSHLEYIIDKVDMILLMSVNPGFGGQSFIPKTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NIK + +AGAD+ V GS+ FNQ Y + ++ ++ ++
Sbjct: 181 KVENIKEIAEAGADMFVAGSAIFNQPD---YKEVIDQMRAELAKVN 223
>gi|51244647|ref|YP_064531.1| ribulose-phosphate 3-epimerase [Desulfotalea psychrophila LSv54]
gi|50875684|emb|CAG35524.1| probable ribulose-phosphate 3-epimerase [Desulfotalea psychrophila
LSv54]
Length = 228
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 92/221 (41%), Positives = 139/221 (62%), Gaps = 5/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
SI+I PSIL+ADF+RLGEEI + +AGA+ IH DVMDG FVPNI+ G V+ + R +
Sbjct: 1 MQSIKIAPSILSADFTRLGEEIEAVDRAGAEVIHIDVMDGHFVPNITIGPLVVEAARRVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D V D HLMIS D +++ AG D +T H E+ H+ R++ I +G K G +NP T
Sbjct: 61 DKVLDVHLMISDADRYVDSFVKAGADWVTVHVETCTHLHRTVSRIKELGAKAGAVLNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+A L+ +++++D++++M+VNPGFGGQ I ST+ K Q I + +E+DGG+
Sbjct: 121 SLASLDFILEDLDLVMLMSVNPGFGGQSFIPSTLEKSWQLHQRIQSLGLEIGIEIDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I +AGA++ V GS+ + Y++ + +LKK A
Sbjct: 181 AATIADATEAGANIFVAGSAVYGSSD---YSETIAELKKLA 218
>gi|260581012|ref|ZP_05848835.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae RdAW]
gi|1573553|gb|AAC22224.1| ribulose-phosphate 3-epimerase (dod) [Haemophilus influenzae Rd
KW20]
gi|260092371|gb|EEW76311.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae RdAW]
Length = 234
Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats.
Identities = 99/225 (44%), Positives = 142/225 (63%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 11 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 70 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
P++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 130 AMPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F + ++ S A
Sbjct: 190 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKQVIDQIRTQLASVSA 234
>gi|169342691|ref|ZP_02863732.1| ribulose-phosphate 3-epimerase [Clostridium perfringens C str.
JGS1495]
gi|169299197|gb|EDS81267.1| ribulose-phosphate 3-epimerase [Clostridium perfringens C str.
JGS1495]
Length = 217
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 147/214 (68%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H E+ HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYEADRHIDRTINYIKSKGCKVGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV +
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIPYSLDKIKEVKEMAKACGKEDLLIQVDGGVGAN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIK +V+AGA++LV GS+ F + K L +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKEDKIEENIKALRE 215
>gi|320530193|ref|ZP_08031263.1| ribulose-phosphate 3-epimerase [Selenomonas artemidis F0399]
gi|320137626|gb|EFW29538.1| ribulose-phosphate 3-epimerase [Selenomonas artemidis F0399]
Length = 255
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 139/214 (64%), Gaps = 2/214 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I I PSIL+ADF+ LG ++ + +AGA +H DVMDG FVPN++ G+ V+ SLR S+
Sbjct: 41 RPIIIAPSILSADFANLGADVRRVEEAGADYLHIDVMDGTFVPNLTIGSCVVESLRKVSN 100
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VFD HLM+ +++I+ A AG D ITFH E++ H R ++ I A G + GVA+NP T
Sbjct: 101 LVFDVHLMVEHPETYIDSFARAGADNITFHVEATRHPHRLIQQIKAAGCRAGVALNPGTS 160
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA--LIGKRSISLEVDGGVTS 180
+ LE++ID++DM+L+MTVNPGFGGQ+ IE+ + KI + + ++ + VDGG+ +
Sbjct: 161 IYTLEELIDDLDMVLLMTVNPGFGGQKFIENMVGKIHALYHTVMENELNVDIAVDGGINA 220
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+S+ AGA++LV GS+ + + + L
Sbjct: 221 ETSESVRSAGANVLVAGSAVYGAPDLAAVIRALR 254
>gi|239932446|ref|ZP_04689399.1| ribulose-phosphate 3-epimerase [Streptomyces ghanaensis ATCC 14672]
gi|291440811|ref|ZP_06580201.1| ribulose-phosphate 3-epimerase [Streptomyces ghanaensis ATCC 14672]
gi|291343706|gb|EFE70662.1| ribulose-phosphate 3-epimerase [Streptomyces ghanaensis ATCC 14672]
Length = 228
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 132/221 (59%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHVEAATAPVRLAREIRAKGARASMALRPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELINKHGLQLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ AGAD+ V GS+ + + + L ++A A
Sbjct: 180 TIERCADAGADVFVAGSAVYGAEDPAEAVRALRHQAEAATA 220
>gi|229524605|ref|ZP_04414010.1| ribulose-phosphate 3-epimerase [Vibrio cholerae bv. albensis VL426]
gi|229338186|gb|EEO03203.1| ribulose-phosphate 3-epimerase [Vibrio cholerae bv. albensis VL426]
Length = 233
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 10 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 69
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 70 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVETSEHVDRTLQLIKECGCQAGVVLNPA 129
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 130 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGV 189
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 190 KVENIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 233
>gi|328472352|gb|EGF43222.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus 10329]
Length = 223
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 146/226 (64%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASDHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+A LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLAHLEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+ + +AGAD+ V GS+ F+Q Y + ++ ++ ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFSQPD---YKQVIDQMRTELAQVE 223
>gi|319407196|emb|CBI80835.1| ribulose-phosphate 3-epimerase [Bartonella sp. 1-1C]
Length = 224
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 112/221 (50%), Positives = 153/221 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+LA+DFS+LG+E+S++ AGA IH D+MDG FVPNISFG DV+++LR
Sbjct: 1 MSRSHLIAPSLLASDFSKLGQELSDVLDAGADWIHLDIMDGHFVPNISFGPDVVKALRPQ 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFD HLMI +D ++ A AG DIIT H ESS H+ RSL+ I AM KK G+AINP
Sbjct: 61 TKAVFDVHLMIKPVDPYLESFAKAGSDIITIHAESSTHLHRSLQMIKAMDKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +LE ++D++D+ILIMTVNPGFGGQ I KI++ K +I R I LEVDGG+T
Sbjct: 121 TSEHVLEYLLDQLDLILIMTVNPGFGGQNFIPDMEDKIKRIKNMIANRPIDLEVDGGITI 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGKTAKAGANVFVAGSAIYKNGNKELYKTRINALRQAAI 221
>gi|260555604|ref|ZP_05827824.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii ATCC 19606]
gi|260410515|gb|EEX03813.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii ATCC 19606]
Length = 228
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 148/227 (65%), Gaps = 3/227 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASYHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI+ + +AGAD+ V GS+ F Q ++ ++D
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKVVIDQMRAELAKVGSVD 227
>gi|261211194|ref|ZP_05925483.1| ribulose-phosphate 3-epimerase [Vibrio sp. RC341]
gi|260839695|gb|EEX66306.1| ribulose-phosphate 3-epimerase [Vibrio sp. RC341]
Length = 224
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 224
>gi|297567604|ref|YP_003686575.1| ketose-bisphosphate aldolase class-II [Meiothermus silvanus DSM
9946]
gi|296852053|gb|ADH65067.1| ketose-bisphosphate aldolase class-II [Meiothermus silvanus DSM
9946]
Length = 224
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 137/211 (64%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL ADF+RLGE+I +AG IH DVMDG FVPN++FG V+ ++R +
Sbjct: 5 RIAPSILTADFARLGEQIREAEEAGVDWIHLDVMDGRFVPNLTFGPLVVEAIRGVTRLPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + ++ A AG D+ITFH E++PH R L+ I +GK+ G+A+NP TP+
Sbjct: 65 DVHLMIAEPERYLEDFARAGADLITFHAEATPHAHRGLQRIKELGKRAGLAVNPGTPLEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L ++ E+D+ L+M+VNPGFGGQ+ I +T +I++ L + LEVDGG+ N
Sbjct: 125 LTHLLPELDLALVMSVNPGFGGQRYIPATTDRIKRLANLKAHLNPECLLEVDGGIKPENA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGAD+LVVGS+ FN++ +RL
Sbjct: 185 AEIYRAGADVLVVGSALFNRQPLAHNLERLK 215
>gi|307326813|ref|ZP_07606005.1| ribulose-phosphate 3-epimerase [Streptomyces violaceusniger Tu
4113]
gi|306887576|gb|EFN18570.1| ribulose-phosphate 3-epimerase [Streptomyces violaceusniger Tu
4113]
Length = 224
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 89/219 (40%), Positives = 130/219 (59%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADFSRL +E + GA +H DVMD FVPN++ G V+ SL +++
Sbjct: 2 ALQINPSILSADFSRLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLGKVTET 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIDDPDRWAPQYIEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
ED++ E+DM+L+MTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLVMTVEPGFGGQAFLDIMLPKIRRTRQLIDKHGLQMWLQVDGGVSAA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ + + L L + A
Sbjct: 180 TIERCAEAGADVFVAGSAVYGADDPAKAVQALRRLAEKA 218
>gi|4930130|pdb|1RPX|A Chain A, D-Ribulose-5-Phosphate 3-Epimerase From Solanum Tuberosum
Chloroplasts
gi|4930131|pdb|1RPX|B Chain B, D-Ribulose-5-Phosphate 3-Epimerase From Solanum Tuberosum
Chloroplasts
gi|4930132|pdb|1RPX|C Chain C, D-Ribulose-5-Phosphate 3-Epimerase From Solanum Tuberosum
Chloroplasts
Length = 230
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+FS+LGE++ I +AG IH DVMDG FVPNI+ G V+ SLR +
Sbjct: 8 KSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI D + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 68 DLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNP 127
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ +E V+D +D++LIM+VNPGFGGQ IES + KI + + +R ++ +EVDGG
Sbjct: 128 GTPLTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGG 187
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V +N +++AGA+ LV GS+ F K + K+
Sbjct: 188 VGPKNAYKVIEAGANALVAGSAVFGAPDYAEAIKGIKTSKR 228
>gi|258515516|ref|YP_003191738.1| ribulose-phosphate 3-epimerase [Desulfotomaculum acetoxidans DSM
771]
gi|257779221|gb|ACV63115.1| ribulose-phosphate 3-epimerase [Desulfotomaculum acetoxidans DSM
771]
Length = 231
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 131/217 (60%), Gaps = 2/217 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS L E++ + AG +H DVMDG FVPNI+ G +++LR +S
Sbjct: 2 IKIAPSILSADFSMLKEDVQRVEAAGVDWLHIDVMDGHFVPNITMGPVAVQALRPHSKLF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + I+ AG D+IT H E+ H+ R+L I G K GVA+NP T
Sbjct: 62 FDVHLMIEKPEQFIDQFVRAGADLITVHAEACTHLHRTLALIKEKGIKAGVALNPSTHQD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E V+ +D++L+MTVNPGFGGQ I I KI++ K ++ ++++ ++VDGG+ +
Sbjct: 122 TIEYVLSMVDLVLLMTVNPGFGGQAFIPEIIGKIKKVKTMLEHQNVNSEIQVDGGINIKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGA +LV GS+ F + + + K+
Sbjct: 182 APLVARAGATVLVAGSAIFGAQDPAVAVEEIRKAAKA 218
>gi|110803689|ref|YP_699022.1| ribulose-phosphate 3-epimerase [Clostridium perfringens SM101]
gi|110684190|gb|ABG87560.1| ribulose-phosphate 3-epimerase [Clostridium perfringens SM101]
Length = 217
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 99/214 (46%), Positives = 146/214 (68%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGE++ + K GA+ +H DVMDG FVPNISFG +++++R+ S+ V
Sbjct: 2 VKIAPSILSADFSILGEQVKRVEKGGAEFLHIDVMDGHFVPNISFGFPIMKAIRNLSNLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++ AG D+IT H ES HI R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPGRYVDEFISAGADLITVHYESDRHIDRTINYIKSKGCKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+L+++I +DM+LIM+VNPGFGGQ I ++ KI++ K + GK + ++VDGGV
Sbjct: 122 MLKNLIPSLDMVLIMSVNPGFGGQSFIPYSLDKIKEVKEIAKACGKEDLLIQVDGGVGEN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIK +V+AGA++LV GS+ F + K L +
Sbjct: 182 NIKEIVEAGANVLVAGSAVFKEDKIEENIKALRE 215
>gi|296105078|ref|YP_003615224.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059537|gb|ADF64275.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 225
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 96/225 (42%), Positives = 143/225 (63%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ +N AGA +HFDVMD +VPN++ G V+++LR+Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTANALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPHTLDKLREVRRRIDESGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD+ V GS+ F+Q Y K ++++++ +
Sbjct: 181 KVNNIGEIAAAGADMFVAGSAIFDQPD---YKKVIDEMRRELAKV 222
>gi|153874595|ref|ZP_02002755.1| Ribulose-phosphate 3-epimerase [Beggiatoa sp. PS]
gi|152068942|gb|EDN67246.1| Ribulose-phosphate 3-epimerase [Beggiatoa sp. PS]
Length = 223
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 141/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ I PSIL+ADF+RLG+E++N+ ++GA +HFDVMD +VPN++ G + +LR +
Sbjct: 1 MPNYMIAPSILSADFARLGDEVTNVLQSGADIVHFDVMDNHYVPNLTIGPLICEALRKHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG ITFHPE S HI RSL+ +H G K+G+ NP
Sbjct: 61 VTAPIDVHLMVKPVDRIIPDFAKAGATYITFHPEGSEHIDRSLQLVHDCGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ V+D++DM+L+M+VNPGFGGQ I +T+ K+R+A+ LI R I LE+DGGV
Sbjct: 121 TPLDYLKYVMDKVDMVLLMSVNPGFGGQSFIPATLDKLREARQLIDSSGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + +AGAD V GS+ F+ + +
Sbjct: 181 KVNNIREIAEAGADTFVAGSAIFSTSDYKATIAAMRA 217
>gi|13473989|ref|NP_105557.1| pentose(ribulose)-5-phosphate-3-epimerase [Mesorhizobium loti
MAFF303099]
gi|14024740|dbj|BAB51343.1| pentose (ribulose)-5-phosphate-3-epimerase [Mesorhizobium loti
MAFF303099]
Length = 225
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 106/220 (48%), Positives = 151/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PS+LA+DFS+LG+E+ + AGA IH DVMDG FVPNI+FG VI+++R+
Sbjct: 1 MSTKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D ++ A+AGCD +T H E+ PH+ RSL+TI +GKK GV++NP
Sbjct: 61 TKAFFDCHLMIAPADPYLAAFAEAGCDGMTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++E V+D +D+ILIMTVNPGFGGQ I + K+R+ KALIG R I +E+DGGV+
Sbjct: 121 TPETMIEYVLDRLDLILIMTVNPGFGGQAFIPGIVDKVRRVKALIGDRPIRIEIDGGVSP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV G++ F +Y + ++ +A
Sbjct: 181 ETAPLVTAAGADVLVAGAAIFKGGSVEAYRANIEAIRTAA 220
>gi|332799415|ref|YP_004460914.1| ribulose-phosphate 3-epimerase [Tepidanaerobacter sp. Re1]
gi|332697150|gb|AEE91607.1| ribulose-phosphate 3-epimerase [Tepidanaerobacter sp. Re1]
Length = 216
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF L EEI + GA +H DVMDG FVPNI+ G VI SL+ +
Sbjct: 2 VKVAPSILSADFCCLSEEIKKVENGGADLLHIDVMDGHFVPNITLGPPVISSLKGKTYLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + HI+ AG DIIT H ES+ H+ R + I G K GVA+NP TP++
Sbjct: 62 FDVHLMIENPEKHIDDFIKAGADIITVHVESTVHLNRLVNYIKNKGIKPGVALNPSTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
L+ ++D+I MILIM+VNPGFGGQ+ I + KIR K +I I +EVDGG+ N
Sbjct: 122 SLQYILDDIYMILIMSVNPGFGGQKFIPKMLEKIRDLKRVILQENPEILIEVDGGINEEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++AGAD+LV GS+ + ++L
Sbjct: 182 APDIIKAGADILVAGSAIYLSSNPGDVIEKLK 213
>gi|323692056|ref|ZP_08106303.1| ribulose-phosphate 3-epimerase [Clostridium symbiosum WAL-14673]
gi|323503856|gb|EGB19671.1| ribulose-phosphate 3-epimerase [Clostridium symbiosum WAL-14673]
Length = 222
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 93/221 (42%), Positives = 145/221 (65%), Gaps = 3/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL ADF RLGE++ + +AGA IH D+MDG FVP+ISFG +I SLRS ++
Sbjct: 2 IILAPSILGADFKRLGEQVQEVDRAGAPYIHLDIMDGTFVPSISFGMPLIESLRSCTNKT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ +++ + AG D+I H E+ H+ R++ I G TGVA+NP TPV+
Sbjct: 62 FDVHMMVEEPGRYVDDMKKAGADLICVHQEACTHLDRTINQIKEAGLMTGVALNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
L +++++DM+LIM+VNPGFGGQ+ I T+ KIR+ + L ++ + S++VDGG++ N
Sbjct: 122 TLSCILEQVDMVLIMSVNPGFGGQKFIPYTLGKIRELRNLCNEKGLATSIQVDGGISPAN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++ +++AGAD++V GS+ F K D+ + A+
Sbjct: 182 VRDVIEAGADVIVAGSAVFKG-NPTENVKTFLDIFEEYAAV 221
>gi|163754265|ref|ZP_02161388.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Kordia algicida OT-1]
gi|161326479|gb|EDP97805.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Kordia algicida OT-1]
Length = 219
Score = 277 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 142/218 (65%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSILAADF+ L +I + ++ A H D+MDG FVPNISFG V++++ +
Sbjct: 1 MSTK-RIAPSILAADFANLQRDIEMVNQSEADWFHIDIMDGVFVPNISFGMPVLKAINKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D +I AD G D++T H E+ H+ R+L+ I A G K GVA+NP
Sbjct: 60 ATKTIDVHLMIVDPDRYIQTFADLGADVLTVHYEACTHLHRTLQAIKAAGMKAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
T V +LEDVI++ID++ IM+VNPGFGGQ IE+T K+++ KALI ++ +E+DGGV
Sbjct: 120 TNVNLLEDVINDIDLVCIMSVNPGFGGQSFIENTYQKVKKLKALITEKGAATEIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+N K+LV AGAD+LV GS F + + + L +
Sbjct: 180 NDKNAKALVDAGADVLVAGSFVFRSENPTATIQNLKKI 217
>gi|169797103|ref|YP_001714896.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii AYE]
gi|184156969|ref|YP_001845308.1| Pentose-5-phosphate-3-epimerase [Acinetobacter baumannii ACICU]
gi|213156490|ref|YP_002318151.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB0057]
gi|215484566|ref|YP_002326801.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB307-0294]
gi|239501362|ref|ZP_04660672.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB900]
gi|301345564|ref|ZP_07226305.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB056]
gi|301512153|ref|ZP_07237390.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB058]
gi|301596807|ref|ZP_07241815.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB059]
gi|332875807|ref|ZP_08443602.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6014059]
gi|169150030|emb|CAM87924.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii AYE]
gi|183208563|gb|ACC55961.1| Pentose-5-phosphate-3-epimerase [Acinetobacter baumannii ACICU]
gi|213055650|gb|ACJ40552.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB0057]
gi|213987232|gb|ACJ57531.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii AB307-0294]
gi|322506866|gb|ADX02320.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii 1656-2]
gi|323516736|gb|ADX91117.1| Pentose-5-phosphate-3-epimerase [Acinetobacter baumannii
TCDC-AB0715]
gi|325124617|gb|ADY84140.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter calcoaceticus
PHEA-2]
gi|332735987|gb|EGJ67019.1| ribulose-phosphate 3-epimerase [Acinetobacter baumannii 6014059]
Length = 228
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 148/227 (65%), Gaps = 3/227 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI+ + +AGAD+ V GS+ F Q ++ ++D
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKVVIDQMRAELAKVGSVD 227
>gi|153214882|ref|ZP_01949680.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 1587]
gi|124115041|gb|EAY33861.1| ribulose-phosphate 3-epimerase [Vibrio cholerae 1587]
Length = 236
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 13 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGASICKALRDYG 72
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 73 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 132
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 133 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRPIRLEIDGGV 192
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 193 KVENIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 236
>gi|307132892|ref|YP_003884908.1| D-ribulose-5-phosphate 3-epimerase [Dickeya dadantii 3937]
gi|306530421|gb|ADN00352.1| D-ribulose-5-phosphate 3-epimerase [Dickeya dadantii 3937]
Length = 225
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 140/226 (61%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTAQALAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITAPVDVHLMVKPVDRLIPDFAEAGASFITFHPEASEHVDRTLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
T ++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + EVDGG
Sbjct: 120 ATSLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F Q Y + +++ A+
Sbjct: 180 VKVDNIAQIAAAGADMFVAGSAIFGQPD---YRAVIAHMRQELEAV 222
>gi|239978380|ref|ZP_04700904.1| ribulose-phosphate 3-epimerase [Streptomyces albus J1074]
gi|291450275|ref|ZP_06589665.1| ribulose-phosphate 3-epimerase [Streptomyces albus J1074]
gi|291353224|gb|EFE80126.1| ribulose-phosphate 3-epimerase [Streptomyces albus J1074]
Length = 228
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 89/221 (40%), Positives = 132/221 (59%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +++
Sbjct: 2 AAQINPSILSADFARLADEARAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATET 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P T +
Sbjct: 60 PLDCHLMIEDPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARAAMALKPATAI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
E+++ E+DM+LIMTV PGFGGQ ++ T+PKIR+ + LIG+ + L+VDGGV++
Sbjct: 120 EPYEELLPELDMVLIMTVEPGFGGQSFLDLTLPKIRRTRELIGRHGLDLWLQVDGGVSAA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + + L D + A A
Sbjct: 180 TIERCAEAGADVFVAGSAVYGAEDPAEAVRSLRDSARKATA 220
>gi|77461341|ref|YP_350848.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens Pf0-1]
gi|77385344|gb|ABA76857.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens Pf0-1]
Length = 224
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 105/226 (46%), Positives = 150/226 (66%), Gaps = 8/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLAAGADFVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D + +AG ITFHPE++ H+ RSL+ I G K+G+ NP
Sbjct: 60 GVTAPIDAHLMVSPVDRIVGDFIEAGATYITFHPEATLHVDRSLQLIREGGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ VID++DM+L+M+VNPGFGGQ+ I T+ K+R+A+A+I R I LE+DGG
Sbjct: 120 ATPLDVLKYVIDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARAIIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK-KSALA 222
V NI+ + AGAD V GS+ FN Y + ++ ++ + ALA
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPN---YQEVIDKMRSELALA 222
>gi|258625712|ref|ZP_05720591.1| Ribulose-phosphate 3-epimerase [Vibrio mimicus VM603]
gi|262166645|ref|ZP_06034382.1| ribulose-phosphate 3-epimerase [Vibrio mimicus VM223]
gi|258581950|gb|EEW06820.1| Ribulose-phosphate 3-epimerase [Vibrio mimicus VM603]
gi|262026361|gb|EEY45029.1| ribulose-phosphate 3-epimerase [Vibrio mimicus VM223]
Length = 224
Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 144/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERIKQSGRQIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPDYHAVIEQMRAELAKAKI 224
>gi|149370111|ref|ZP_01889962.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[unidentified eubacterium SCB49]
gi|149356602|gb|EDM45158.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[unidentified eubacterium SCB49]
Length = 219
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 133/217 (61%), Gaps = 2/217 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PS+LAADF+ L ++ + + A H DVMDG FVPNIS+G VI++++ ++
Sbjct: 1 MSNIIIAPSMLAADFANLQRDVEMVNASEADWFHIDVMDGHFVPNISYGMPVIQAIKKHA 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + +I A G DIIT H ES+ H+ R+L I G K GV +N T
Sbjct: 61 TKPLDVHLMIEKPERYIEEFAKVGADIITVHYESTVHLHRTLTQIEDAGCKAGVVLNLTT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV++LED++ + M+LIM++NPGFGGQ+ E T K+++ + +I ++ + +E+DGGVT
Sbjct: 121 PVSVLEDILPKCYMVLIMSINPGFGGQKFEEITYNKVKKLRKMIDEQGLDTHIEIDGGVT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+N K L+ AGA LV GS F + K + L
Sbjct: 181 DKNAKKLMDAGATALVAGSYIFKSENPTETIKGMKKL 217
>gi|194434640|ref|ZP_03066895.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 1012]
gi|194417099|gb|EDX33213.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 1012]
gi|332085531|gb|EGI90697.1| ribulose-phosphate 3-epimerase [Shigella boydii 5216-82]
gi|332085843|gb|EGI91007.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 155-74]
Length = 225
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVLDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|56461424|ref|YP_156705.1| D-ribulose-5-phosphate 3-epimerase [Idiomarina loihiensis L2TR]
gi|56180434|gb|AAV83156.1| D-ribulose-5-phosphate 3-epimerase [Idiomarina loihiensis L2TR]
Length = 224
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 103/218 (47%), Positives = 142/218 (65%), Gaps = 5/218 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKP--LIAPSILSADFARLGEEVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 58
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ D HLM+ +D I A+AG IITFHPE+S H+ R+L+ IH G + G+ +NP
Sbjct: 59 GIEAPIDVHLMVKPVDRIIPDFAEAGASIITFHPEASDHVDRTLQLIHEQGCQAGLVLNP 118
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+R + I R I LEVDGG
Sbjct: 119 ATPLHYLDHVMDKVDVILLMSVNPGFGGQSFIPSTLDKLRAVRKRIKASGRDIRLEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + +AGAD+ V GS+ FN S + + D
Sbjct: 179 VKVSNIGEIAEAGADMFVAGSAIFNADDYASVIRTMRD 216
>gi|91227278|ref|ZP_01261703.1| ribulose-phosphate 3-epimerase [Vibrio alginolyticus 12G01]
gi|269964443|ref|ZP_06178684.1| Ribulose-phosphate 3-epimerase [Vibrio alginolyticus 40B]
gi|91188672|gb|EAS74961.1| ribulose-phosphate 3-epimerase [Vibrio alginolyticus 12G01]
gi|269830781|gb|EEZ84999.1| Ribulose-phosphate 3-epimerase [Vibrio alginolyticus 40B]
Length = 223
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASDHVDRTLQLIKEHGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+A LE ++D++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLASLEFIMDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + +AGAD+ V GS+ F + ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGEPDYKQVIDQMRA 217
>gi|319783970|ref|YP_004143446.1| ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169858|gb|ADV13396.1| ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 228
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 111/220 (50%), Positives = 156/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PS+L+ADFSRLG+E+ + +AGA IH DVMDG FVPNI+FG VI+++R
Sbjct: 1 MVTGTIIAPSVLSADFSRLGDEVEAVVRAGADWIHLDVMDGHFVPNITFGPPVIKAIRDR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D +FDCHLMI+ D ++ ADAGCDIIT H E+ PH+ RSL+ I +GKK GV++NP
Sbjct: 61 TDKIFDCHLMIAPADPYLAAFADAGCDIITVHAEAGPHLDRSLQAIKNLGKKAGVSLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +++E V+D +D++L+MTVNPGFGGQ I + I KIR+ KAL+G R I +E+DGGVT+
Sbjct: 121 TPESVIEYVLDRLDLVLLMTVNPGFGGQAFISAVIEKIRRIKALVGHRPIDIEIDGGVTA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV GS+ F E +Y + ++++A
Sbjct: 181 ETAPLVAAAGANVLVAGSAVFKGGAEAAYRANIGTIRQAA 220
>gi|326440080|ref|ZP_08214814.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
Length = 228
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 92/221 (41%), Positives = 133/221 (60%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADFSRL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFSRLADEAKAVD--GADWLHVDVMDNHFVPNLTLGVPVVESLGRATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI+ D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIADPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LIGK + L+VDGGV+
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQSFLDIMLPKIRRTRELIGKHGLELWLQVDGGVSDA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + L + ++ LA
Sbjct: 180 TIERCAEAGADVFVAGSAVYGADDPARAVRALREKAEATLA 220
>gi|182420437|ref|ZP_02951656.1| ribulose-phosphate 3-epimerase [Clostridium butyricum 5521]
gi|237668736|ref|ZP_04528720.1| ribulose-phosphate 3-epimerase [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182375723|gb|EDT73323.1| ribulose-phosphate 3-epimerase [Clostridium butyricum 5521]
gi|237657084|gb|EEP54640.1| ribulose-phosphate 3-epimerase [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 214
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE++ +I K GA+ IH DVMDG FVPNISFG +I+S+R +D V
Sbjct: 2 VKIAPSILSADFSKLGEDVKSIDKGGAEFIHIDVMDGSFVPNISFGFPIIKSIRKITDKV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I+ +AG D+IT H E+ HI R++ I + GK GVA+NP TPV+
Sbjct: 62 FDVHLMIDNPSHYIDDFIEAGADLITVHYEADRHIDRTINYIKSKGKMAGVALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+L+++I +DM+LIM+VNPGFGGQ+ I ++ KI + K L K + + ++VDGG+ N
Sbjct: 122 VLKNLIPNLDMVLIMSVNPGFGGQKFIPYSLDKINEVKQLSEKLNPELLIQVDGGIGCGN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K ++ AGA++LV GS+ FN K L
Sbjct: 182 AKEVIDAGANVLVAGSAVFNGGDVSENIKALR 213
>gi|256424410|ref|YP_003125063.1| ribulose-phosphate 3-epimerase [Chitinophaga pinensis DSM 2588]
gi|256039318|gb|ACU62862.1| ribulose-phosphate 3-epimerase [Chitinophaga pinensis DSM 2588]
Length = 219
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 141/215 (65%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA++F LG+E+ + ++ A +H DVMDG FVPNISFG VI LR + FD
Sbjct: 8 IAPSLLASNFLELGKEVEMLNRSEADWLHLDVMDGRFVPNISFGLPVISQLRKATTKTFD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + AG D++T H E+ H+ R+++ I ++G K GVA+NP TPV +L
Sbjct: 68 VHLMIEEPEKYAEDFKKAGADLLTVHYEACTHLHRNIQQIKSLGMKAGVALNPHTPVHLL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E++I++ID++LIM+VNPGFGGQ I+ ++ KIRQ + +I +EVDGG+T N
Sbjct: 128 ENIINDIDLVLIMSVNPGFGGQHFIQRSLDKIRQTREMINHYKAHALIEVDGGITLDNAA 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
S++ AGA++LV GSS F K + ++ L+K+
Sbjct: 188 SILDAGANVLVAGSSVFASKDPEA---TISALRKA 219
>gi|197286857|ref|YP_002152729.1| ribulose-phosphate 3-epimerase [Proteus mirabilis HI4320]
gi|227354956|ref|ZP_03839367.1| ribulose-phosphate 3-epimerase [Proteus mirabilis ATCC 29906]
gi|194684344|emb|CAR45963.1| ribulose-phosphate 3-epimerase [Proteus mirabilis HI4320]
gi|227164743|gb|EEI49590.1| ribulose-phosphate 3-epimerase [Proteus mirabilis ATCC 29906]
Length = 224
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 141/220 (64%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++FGA + ++LR+Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDTEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG I+FH E+S H+ R+++ I G K G+ +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAQAGATYISFHAEASEHVDRTIQLIKDCGCKAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I + E+DGGV
Sbjct: 121 TPLNYLDYVMDKLDLILLMSVNPGFGGQSFIPKTLDKLRQVRKMIDDGGYDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
NI + QAGAD+ V GS+ FNQ Y + ++++++
Sbjct: 181 KVDNIAEIAQAGADMFVAGSAIFNQPD---YKQVIDNMRR 217
>gi|32307592|gb|AAP79201.1| ribulose-5-phosphate 3-epimerase [Bigelowiella natans]
Length = 321
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 97/228 (42%), Positives = 144/228 (63%), Gaps = 10/228 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
+ I PSIL+A+F++LGE++ + GA +HFDVMD +VPN++ G V ++LR +
Sbjct: 93 KMLIAPSILSANFAKLGEDVDRVLADGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVT 152
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+S +D I AG ITFHPE+S H+ RSL+ I G K G+ NP TP
Sbjct: 153 APIDVHLMVSPVDRIIPDFIAAGASYITFHPEASLHVDRSLQMIKDAGLKCGLVFNPATP 212
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDG 176
+ ILE VID++D++L+M+VNPGFGGQ+ I +T+ K ++A+ALI R I LE+DG
Sbjct: 213 LDILEYVIDKVDIVLLMSVNPGFGGQKFIPNTLEKAKKARALIDAEMARSGRKIRLEIDG 272
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
GV+ NIK + AG D+ V GS+ FN Y + ++ ++ ++
Sbjct: 273 GVSPANIKEVAAAGVDMFVAGSAIFNTPD---YKETIDTMRAELAQVE 317
>gi|302874755|ref|YP_003843388.1| ribulose-phosphate 3-epimerase [Clostridium cellulovorans 743B]
gi|307690630|ref|ZP_07633076.1| ribulose-phosphate 3-epimerase [Clostridium cellulovorans 743B]
gi|302577612|gb|ADL51624.1| ribulose-phosphate 3-epimerase [Clostridium cellulovorans 743B]
Length = 217
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 103/217 (47%), Positives = 145/217 (66%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGE++ N+ KAGA IH DVMDG FVPNISFG VI S+R + +
Sbjct: 2 IKISPSILSADFSKLGEDVINLEKAGADMIHIDVMDGNFVPNISFGMPVINSIRPLTKAT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I D G DIIT H E+ HI ++ I + G K GVA+NP T +
Sbjct: 62 FDVHLMIEEPSKYIKQFVDLGGDIITIHYEADRHIDSTINMIKSYGVKAGVALNPGTSTS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+L+D+I E+DM+LIMTVNPGFGGQ+ IE T+ KIR+ + + K + ++VDGG+ N
Sbjct: 122 LLKDIIREVDMVLIMTVNPGFGGQKFIEYTLEKIREVREMADKLNPDLLIQVDGGIGREN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ +V+AGA+++V GS+ F + + + L+ +
Sbjct: 182 IRKVVEAGANVIVAGSAVFKEN---RIKENIEALRTA 215
>gi|299771480|ref|YP_003733506.1| ribulose-phosphate 3-epimerase [Acinetobacter sp. DR1]
gi|298701568|gb|ADI92133.1| ribulose-phosphate 3-epimerase [Acinetobacter sp. DR1]
Length = 228
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 104/218 (47%), Positives = 145/218 (66%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D ILIM+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILIMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + +AGAD+ V GS+ F Q ++
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKVVIDQMRA 218
>gi|163850424|ref|YP_001638467.1| ribulose-phosphate 3-epimerase [Methylobacterium extorquens PA1]
gi|163662029|gb|ABY29396.1| Ribulose-phosphate 3-epimerase [Methylobacterium extorquens PA1]
Length = 234
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 11 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP + +
Sbjct: 71 VHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASAI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D +D++L+MTVNPGFGGQ I S++ + + KA+ RSI + VDGG+T
Sbjct: 131 EPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPETAGPA 190
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
QAGA++LV GS+ F G Y K + ++++A +
Sbjct: 191 AQAGANILVAGSAAFKG-GPTQYEKNVAAIREAAQSA 226
>gi|15595804|ref|NP_249298.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PAO1]
gi|107099593|ref|ZP_01363511.1| hypothetical protein PaerPA_01000606 [Pseudomonas aeruginosa PACS2]
gi|116054335|ref|YP_788780.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889348|ref|YP_002438212.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa LESB58]
gi|254237179|ref|ZP_04930502.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa C3719]
gi|296387115|ref|ZP_06876614.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PAb1]
gi|313111747|ref|ZP_07797540.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa 39016]
gi|9946481|gb|AAG03996.1|AE004497_3 ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PAO1]
gi|115589556|gb|ABJ15571.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169110|gb|EAZ54621.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa C3719]
gi|218769571|emb|CAW25331.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa LESB58]
gi|310884042|gb|EFQ42636.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa 39016]
Length = 224
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 145/223 (65%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVSAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLEVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
V +NI+ + AGAD V GS+ FN + ++ +L ++
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFNAPDYAEVIRAMHAELAQA 222
>gi|254000217|ref|YP_003052280.1| ribulose-phosphate 3-epimerase [Methylovorus sp. SIP3-4]
gi|313202183|ref|YP_004040841.1| ribulose-phosphate 3-epimerase [Methylovorus sp. MP688]
gi|253986896|gb|ACT51753.1| ribulose-phosphate 3-epimerase [Methylovorus sp. SIP3-4]
gi|312441499|gb|ADQ85605.1| ribulose-phosphate 3-epimerase [Methylovorus sp. MP688]
Length = 232
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 101/232 (43%), Positives = 147/232 (63%), Gaps = 9/232 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+A+F++LG+EIS++ +GA +HFDVMD +VPN++ G V ++R
Sbjct: 1 MAKPFRIAPSILSANFAKLGQEISDVITSGADIVHFDVMDNHYVPNLTIGPLVCEAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D++ D HLM+ +D I A AG +IITFHPE+S HI RSL + +G K+G+ NP
Sbjct: 61 TDAIIDVHLMVKPVDRIIPDFAKAGANIITFHPEASDHIDRSLSLVRELGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K+RQA+A I R I LE+
Sbjct: 121 TPLDYLDYVMDKVDMILLMSVNPGFGGQKFIPGTLDKLRQARARIDAYTEKTGREIWLEI 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
DGGV + NI + +AGAD V GS+ F Y + +L+ +
Sbjct: 181 DGGVNTANIAEIARAGADTFVAGSAVFGAGKDTDPNRYDTIIGNLRAELAKV 232
>gi|70732919|ref|YP_262690.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens Pf-5]
gi|68347218|gb|AAY94824.1| ribulose-phosphate 3-epimerase [Pseudomonas fluorescens Pf-5]
Length = 224
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 145/225 (64%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM++ +D I +AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDAHLMVTPVDRIIGDFIEAGATYITFHPEATLHVDRSLQMIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN +++ + ALA
Sbjct: 180 VNVGNIREIAAAGADTFVAGSAIFNAPNYQEVIEKMR--AELALA 222
>gi|313894840|ref|ZP_07828400.1| ribulose-phosphate 3-epimerase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976521|gb|EFR41976.1| ribulose-phosphate 3-epimerase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 255
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 91/215 (42%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PSIL+ADF+ LG ++ + +AGA +H DVMDG FVPN++ G+ V+ SLR S
Sbjct: 40 ERPIIIAPSILSADFANLGADVRRVEEAGADYLHIDVMDGTFVPNLTIGSCVVESLRKVS 99
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ VFD HLM+ +++I+ A AG D ITFH E++ H R ++ I A G + GVA+NP T
Sbjct: 100 NLVFDVHLMVEHPETYIDSFARAGADNITFHVEATRHPHRLIQQIKAAGCRAGVALNPGT 159
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA--LIGKRSISLEVDGGVT 179
+ LE++ID++DM+L+MTVNPGFGGQ+ IE+ + KI + + ++ + VDGG+
Sbjct: 160 SIYTLEELIDDLDMVLLMTVNPGFGGQKFIENMVGKIHALYHTVMENELNVDIAVDGGIN 219
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +S+ AGA++LV GS+ + + + L
Sbjct: 220 AETSESVRSAGANVLVAGSAVYGAPDLAAAIRALR 254
>gi|28198099|ref|NP_778413.1| ribulose-phosphate 3-epimerase [Xylella fastidiosa Temecula1]
gi|182680727|ref|YP_001828887.1| ribulose-phosphate 3-epimerase [Xylella fastidiosa M23]
gi|28056159|gb|AAO28062.1| D-ribulose-5-phosphate 3-epimerase [Xylella fastidiosa Temecula1]
gi|182630837|gb|ACB91613.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa M23]
gi|307579192|gb|ADN63161.1| ribulose-phosphate 3-epimerase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 223
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 142/225 (63%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY
Sbjct: 1 MSNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG +I+FH E+S H+ R+++ I + G G+ NP
Sbjct: 61 ITAPIDVHLMVEPVDRIVPDFAQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TPV +L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + I R + L+VDGGV
Sbjct: 121 TPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLGRPVRLQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI ++ +AGAD V GS+ F+ + YA + ++ + A+
Sbjct: 181 GIDNIGAIAEAGADTFVAGSAIFHARD---YADVVAQMRAAVAAV 222
>gi|28899515|ref|NP_799120.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus RIMD
2210633]
gi|260366346|ref|ZP_05778792.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus K5030]
gi|260879407|ref|ZP_05891762.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AN-5034]
gi|260896874|ref|ZP_05905370.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus Peru-466]
gi|260902020|ref|ZP_05910415.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AQ4037]
gi|28807751|dbj|BAC61004.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus RIMD
2210633]
gi|308086289|gb|EFO35984.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus Peru-466]
gi|308089707|gb|EFO39402.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AN-5034]
gi|308109414|gb|EFO46954.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AQ4037]
gi|308112695|gb|EFO50235.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus K5030]
Length = 223
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 146/226 (64%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASDHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+A LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLAHLEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+ + +AGAD+ V GS+ F Q + Y + ++ ++ ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQ---LDYKQVIDQMRTELAQVE 223
>gi|163815230|ref|ZP_02206607.1| hypothetical protein COPEUT_01390 [Coprococcus eutactus ATCC 27759]
gi|158449425|gb|EDP26420.1| hypothetical protein COPEUT_01390 [Coprococcus eutactus ATCC 27759]
Length = 228
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 91/220 (41%), Positives = 142/220 (64%), Gaps = 2/220 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I + PS+L+ DF+ + + I + +A +H DVMDG FVPNISFGA VI+ LR
Sbjct: 1 MGKEIILSPSLLSVDFAHIADGIKELDRAEVPALHLDVMDGAFVPNISFGAPVIKCLRKE 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ +FD HLM+ +I+ AG D +T H E H+ R++ I G K GVA+NP
Sbjct: 61 TNMIFDVHLMVEEPVRYIDDFKKAGADWVTVHAECCKHLHRTITAIKEAGMKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++++ V+DE+DM+L+M+VNPGFGGQ I S++ KI + + LI +R++ +EVDGGV
Sbjct: 121 TPVSVIDYVLDEVDMVLVMSVNPGFGGQSFIPSSLRKIVEVRKLIDERNLDVRIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+N+ ++++GAD++V GS+ FN + K + ++
Sbjct: 181 NLKNVGEVIKSGADVIVAGSAVFNGDIYENSTKFMEKFRE 220
>gi|221639193|ref|YP_002525455.1| Ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides KD131]
gi|221159974|gb|ACM00954.1| Ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides KD131]
Length = 236
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 92/201 (45%), Positives = 129/201 (64%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R +
Sbjct: 5 RRIKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G+K G+A+NP T
Sbjct: 65 GVMDVHLMIAPVDPYIEAFAAAGADVITAHLEAGPHIHRTLQAIRGTGRKAGLALNPGTG 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + ++D +D++ IMTVNPGFGGQ+ I S + K+R +A+IG R I +E+DGGVT
Sbjct: 125 LDAVSHLLDLLDLVCIMTVNPGFGGQKFIASQVDKVRDLRAMIGDRPIHIEIDGGVTPET 184
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ AGAD+LV GS+ F
Sbjct: 185 APLVAAAGADVLVAGSAVFKG 205
>gi|158320469|ref|YP_001512976.1| ribulose-phosphate 3-epimerase [Alkaliphilus oremlandii OhILAs]
gi|158140668|gb|ABW18980.1| Ribulose-phosphate 3-epimerase [Alkaliphilus oremlandii OhILAs]
Length = 217
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFS L ++ + AG +H DVMDG FVPNI+ G ++ SL+ +
Sbjct: 1 MKLAPSILSADFSNLIGDVKRVEDAGCDMLHIDVMDGHFVPNITIGPLIVESLQGKTTLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I A AG II+ H E+ H+ R+++ I A K VA+NP TP+
Sbjct: 61 FDVHLMIEDPDQYIPQFAKAGAHIISVHSEACVHLHRTIQLIKAHNVKAAVALNPGTPLN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++E V++++DM+LIMTVNPGFGGQ IE I KIR K +I R I ++VDGG+ N
Sbjct: 121 VIEHVLEDLDMVLIMTVNPGFGGQSFIEPMIEKIRSLKKIIEDRGLSIDIQVDGGIKVDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K ++ AGA+++V GS+ F + + +
Sbjct: 181 VKKVIDAGANIIVAGSAIFGSENIPEIVTKFRE 213
>gi|288940027|ref|YP_003442267.1| ribulose-phosphate 3-epimerase [Allochromatium vinosum DSM 180]
gi|288895399|gb|ADC61235.1| ribulose-phosphate 3-epimerase [Allochromatium vinosum DSM 180]
Length = 230
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 92/229 (40%), Positives = 141/229 (61%), Gaps = 6/229 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ I PSIL+A+F++LGEE+ N+ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MPADLIAPSILSANFAKLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCEALRKHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG ITFHPE+S H+ R+L+ I G K+G+ NP
Sbjct: 61 VTAPIDVHLMVKPVDRLIPDFAKAGATYITFHPEASEHVDRTLQLIRDSGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ L+ V++++DMIL+M+VNPGFGGQ I + + K+R+ + +I + + E+DGGV
Sbjct: 121 TPLTYLDYVLEKVDMILLMSVNPGFGGQSFIPTALDKLREVREIIDDSGLDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAID 224
+ NI + AGAD V GS F Q Y + +++++ +D
Sbjct: 181 KADNIAEIKAAGADTFVSGSGLFGQGRDSDPNRYDSIVAEMRRALARVD 229
>gi|225018181|ref|ZP_03707373.1| hypothetical protein CLOSTMETH_02118 [Clostridium methylpentosum
DSM 5476]
gi|224949178|gb|EEG30387.1| hypothetical protein CLOSTMETH_02118 [Clostridium methylpentosum
DSM 5476]
Length = 234
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PS+L+ADF+ L +E + +AGA +H DVMDG FVPN++ GA V+ LR S
Sbjct: 25 EIKISPSMLSADFANLEQEARRMEQAGADMLHIDVMDGHFVPNLTLGAPVLACLRQKSGM 84
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMIS +I+ AG D+ITFH ES +R + A G + G+ + P+TP+
Sbjct: 85 FLDVHLMISDPLRYIDDFVKAGADLITFHVESDSDPAECIRRLRAHGVQVGITLKPDTPL 144
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E +D++DM L+MTV PGFGGQ + + K+R + + ++VDGG+ +
Sbjct: 145 TAIEPYLDQVDMALVMTVEPGFGGQSFLPEMMDKVRALRT--ARPVFDIQVDGGINEQTA 202
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K+ VQAGA++LV GS F L
Sbjct: 203 KTAVQAGANILVAGSYVFGAPDAAQAIASLKQ 234
>gi|330812115|ref|YP_004356577.1| ribulose-phosphate 3-epimerase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380223|gb|AEA71573.1| putative ribulose-phosphate 3-epimerase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 224
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 145/225 (64%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D + +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GITAPIDAHLMVSPVDRIVGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMILLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V +NI+ + AGAD V GS+ FN ++ + ALA
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFNAPNYEEVIAQMR--AELALA 222
>gi|323527454|ref|YP_004229607.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1001]
gi|323384456|gb|ADX56547.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1001]
Length = 242
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 7/221 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 12 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 71 VDVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T + L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEV
Sbjct: 131 TSLNYLDHVMDKLDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYKARTGREIHLEV 190
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGGV NI + AGAD V GS+ F Q ++
Sbjct: 191 DGGVKVDNIAEIAAAGADTFVAGSAIFGQPDHKVVIDKMRA 231
>gi|226327384|ref|ZP_03802902.1| hypothetical protein PROPEN_01254 [Proteus penneri ATCC 35198]
gi|225203910|gb|EEG86264.1| hypothetical protein PROPEN_01254 [Proteus penneri ATCC 35198]
Length = 223
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 96/221 (43%), Positives = 140/221 (63%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++FGA + ++LR+Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDTEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A+AG I+FH E+S H+ R+++ I G K G+ +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAEAGATYISFHAEASDHVDRTIQLIKDCGCKAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + +I + E+DGGV
Sbjct: 121 TPLNYLDYVMDKLDLILLMSVNPGFGGQSFIPNTLDKLRQVRKMIDDGGYDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL-NDLKK 218
NI + QAGAD+ V GS+ FNQ + +LKK
Sbjct: 181 KVDNIAEIAQAGADMFVAGSAIFNQPDYKHVIDNMRRELKK 221
>gi|83950690|ref|ZP_00959423.1| ribulose-phosphate 3-epimerase [Roseovarius nubinhibens ISM]
gi|83838589|gb|EAP77885.1| ribulose-phosphate 3-epimerase [Roseovarius nubinhibens ISM]
Length = 229
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 141/224 (62%), Gaps = 4/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+I+I PSIL+ADF+ G+EI I GA +H DVMDG FVPN++FG +++ R +
Sbjct: 5 RAIKIAPSILSADFANFGQEIQAIEAQGADWVHVDVMDGHFVPNLTFGPQAVKAFRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMI+ +D +I+ ADAG D++T H E+ PHI R+L+ I G K GVA+NP T
Sbjct: 65 TVMDVHLMIAPVDPYIDAYADAGADVLTAHVEAGPHIHRTLQAIRGAGMKAGVALNPGTS 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++D D+I +MTVNPGFGGQ+ I+ T KI + +A+IG R + +E+DGGVT
Sbjct: 125 ADAVAHLLDLTDVICVMTVNPGFGGQKFIDMT-AKIAELRAMIGDRPVHIEIDGGVTPET 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKKSALAI 223
+V AGAD+LV GS F Y + + ++ +A A
Sbjct: 184 APLVVAAGADVLVAGSGVFKGGSVAKPEVYGENIRAIRSAAEAA 227
>gi|227326816|ref|ZP_03830840.1| ribulose-phosphate 3-epimerase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 225
Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 140/218 (64%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTANVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI + EVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI ++ +AGAD+ V GS+ F + ++
Sbjct: 180 VKVENIGAIAEAGADMFVAGSAIFGHPDYRAVIDQMRS 217
>gi|332188793|ref|ZP_08390504.1| ribulose-phosphate 3-epimerase [Sphingomonas sp. S17]
gi|332011192|gb|EGI53286.1| ribulose-phosphate 3-epimerase [Sphingomonas sp. S17]
Length = 215
Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 105/215 (48%), Positives = 146/215 (67%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+RLGEE+ I AGA IH DVMDG FVPNI+ G V+++LR ++
Sbjct: 1 MRIAPSILSADFARLGEEVRAIDAAGADWIHIDVMDGHFVPNITIGPAVVKALRPHTAKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS ID++++ A+AG D IT HPE+ PHI R+++ I +GK+ GV +NP TP
Sbjct: 61 FDVHLMISPIDAYLDAFAEAGADTITVHPEAGPHIHRTIQHIKGLGKRAGVVLNPATPAK 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+L+ +ID +D++L+M+VNPGFGGQ IES + KI + +I R+I LEVDGGV
Sbjct: 121 MLDYLIDMVDLVLVMSVNPGFGGQSFIESQLKKISAIRKMIEHSGRAIDLEVDGGVDPHW 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K ++AGAD LV G++ F G Y + L+
Sbjct: 181 AKRCIEAGADALVAGTAAFRG-GPSQYTANIAALR 214
>gi|304397805|ref|ZP_07379681.1| ribulose-phosphate 3-epimerase [Pantoea sp. aB]
gi|304354516|gb|EFM18887.1| ribulose-phosphate 3-epimerase [Pantoea sp. aB]
Length = 227
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 139/215 (64%), Gaps = 6/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDALIPEFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + ++ EVDGGV NI
Sbjct: 126 LDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLREARRRIDQSGYNIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + AGAD+ V GS+ F Y K ++D++
Sbjct: 186 REIAAAGADMFVAGSAIFGHPD---YKKVIDDMRN 217
>gi|260772073|ref|ZP_05880990.1| ribulose-phosphate 3-epimerase [Vibrio metschnikovii CIP 69.14]
gi|260612940|gb|EEX38142.1| ribulose-phosphate 3-epimerase [Vibrio metschnikovii CIP 69.14]
Length = 226
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 96/226 (42%), Positives = 145/226 (64%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLG+++ + AGA IHFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGDDVDKVLAAGADVIHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A+AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVEPVDRIIPDFANAGASMITFHVEASKHVDRTLQLIKEHGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + RSI LE+DGGV
Sbjct: 121 TPLSHLDYIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRERITQSGRSIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
NI+ + QAGAD+ V GS+ F + Y ++ ++ ++
Sbjct: 181 KVENIREIAQAGADMFVAGSAIFGEPD---YKAVIDAMRSELAGVE 223
>gi|254467871|ref|ZP_05081277.1| ribulose-phosphate 3-epimerase [beta proteobacterium KB13]
gi|207086681|gb|EDZ63964.1| ribulose-phosphate 3-epimerase [beta proteobacterium KB13]
Length = 232
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 144/228 (63%), Gaps = 9/228 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL+ADF++LG+E+S++ +GA +HFDVMD +VPN++ G V ++R
Sbjct: 1 MSKDFRIAPSILSADFAKLGQEVSDVITSGADIVHFDVMDNHYVPNLTIGPLVCEAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D++ D HLMI +D I A AG +IITFHPE+S HI RSL + G K+G+ NP
Sbjct: 61 TDAIIDVHLMIEPVDRIIPDFAKAGANIITFHPEASNHIDRSLSLVRDQGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D++DM+L+M+VNPGFGGQ+ + S + K++ A+ I R I LE+
Sbjct: 121 TPLDYLDYVMDKVDMVLLMSVNPGFGGQKFLPSALEKLKAARKKIDAYTQETGREIWLEI 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKS 219
DGGV + NI + +AGAD V GS+ F Y + L+ S
Sbjct: 181 DGGVNANNIADIARAGADTFVAGSAVFGAANDSDPNRYNTIIKQLRDS 228
>gi|326203172|ref|ZP_08193038.1| ribulose-phosphate 3-epimerase [Clostridium papyrosolvens DSM 2782]
gi|325986818|gb|EGD47648.1| ribulose-phosphate 3-epimerase [Clostridium papyrosolvens DSM 2782]
Length = 222
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 105/221 (47%), Positives = 146/221 (66%), Gaps = 4/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS LG EI I K GA IH DVMDG FVPNI+ G V++ LR Y+
Sbjct: 2 IKIAPSILSADFSCLGSEIEKIDKNGADIIHIDVMDGHFVPNITIGPGVVKCLRKYTQKT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS+ D +I A AG DIIT H E++ H+ R+++ I GKK GVA+NP TP+
Sbjct: 62 FDVHLMISNPDEYIEQFAQAGADIITVHAEATKHLNRTIQLIKNCGKKAGVALNPATPLT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+ V+ ++DM+LIMTVNPGFGGQ + + KI K ++ + ++ +EVDGG+ + N
Sbjct: 122 VLDFVLQDVDMVLIMTVNPGFGGQSYLPQSTKKISDLKNMMIRNTLVADIEVDGGIDANN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAK--RLNDLKKSAL 221
I + +AGA+++V GS+ F Q + +LN +SAL
Sbjct: 182 INIVTKAGANVIVAGSAVFKQDDVGEAIRGLKLNSYNRSAL 222
>gi|9105012|gb|AAF83021.1|AE003874_5 D-ribulose-5-phosphate 3-epimerase [Xylella fastidiosa 9a5c]
Length = 239
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 93/225 (41%), Positives = 139/225 (61%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY
Sbjct: 17 MSNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYG 76
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + AG +I+FH E+S H+ R+++ I + G G+ NP
Sbjct: 77 ITAPIDVHLMVEPVDRIVPDFTQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPA 136
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TPV +L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + I R + LEVDGGV
Sbjct: 137 TPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLGRPVRLEVDGGV 196
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI ++ +AGAD V GS+ F+ Y + ++ + A+
Sbjct: 197 GIDNIGAIAEAGADTFVAGSAIFHAPD---YGDVIAHMRAAVAAV 238
>gi|170723944|ref|YP_001751632.1| ribulose-phosphate 3-epimerase [Pseudomonas putida W619]
gi|169761947|gb|ACA75263.1| Ribulose-phosphate 3-epimerase [Pseudomonas putida W619]
Length = 224
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 141/223 (63%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPYA-IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCTALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGASYITFHPEASQHIDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATSLDALKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
V NI+ + AGAD V GS+ FN ++ +L ++
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYQEVIAKMRAELAQA 222
>gi|226946673|ref|YP_002801746.1| ribulose-phosphate 3-epimerase [Azotobacter vinelandii DJ]
gi|226721600|gb|ACO80771.1| ribulose-phosphate 3-epimerase [Azotobacter vinelandii DJ]
Length = 224
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 137/218 (62%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDRVLAAGADIVHFDVMDNHYVPNLTIGPMVCTALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG ITFHPE+S HI RSL+ I G + G+ NP
Sbjct: 60 GIQAPIDVHLMVKPVDRIIGDFLEAGASYITFHPEASEHIDRSLQLIRDGGARAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDCLKYVMDKLDMLLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V +NI + AGAD V GS+ F Q + +
Sbjct: 180 VNVKNIGEIAAAGADTFVAGSAIFGQPDYKAVIDAMRA 217
>gi|206575915|ref|YP_002236241.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae 342]
gi|206564973|gb|ACI06749.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae 342]
Length = 225
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV + NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGVKASNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F Q Y K ++ ++
Sbjct: 186 GEIAAAGADMFVAGSAIFGQPD---YKKVIDQMR 216
>gi|53803277|ref|YP_114988.1| ribulose-phosphate 3-epimerase [Methylococcus capsulatus str. Bath]
gi|53757038|gb|AAU91329.1| ribulose-phosphate 3-epimerase [Methylococcus capsulatus str. Bath]
Length = 230
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 137/220 (62%), Gaps = 6/220 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PSIL+ADF+RLGEE+ ++ K+GA +HFDVMD +VPN++ G V +LR +
Sbjct: 3 EFWIAPSILSADFARLGEEVDDVLKSGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGVT 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ +D I A AG ITFHPE+S HI RSL+ + G KTG+ NP TP
Sbjct: 63 APIDVHLMVKPVDRIIPDFAKAGASYITFHPEASEHIDRSLQLVKDSGCKTGLVFNPATP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ L+ V+D++DMIL+M+VNPGFGGQ I + K+R+ + I R+I LE+DGGV +
Sbjct: 123 LNYLDHVMDKLDMILLMSVNPGFGGQSFIPYVLDKVRECRRRIDASGRNIRLEIDGGVNA 182
Query: 181 RNIKSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLK 217
RNI+ + AG D V GS+ F + Y + L+
Sbjct: 183 RNIREIAAAGCDTFVAGSAVFGAGKAEDPNRYDSIIRALR 222
>gi|319780462|ref|YP_004139938.1| ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166350|gb|ADV09888.1| ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 225
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 104/220 (47%), Positives = 154/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PS+LA+DFS+LG+E+ + AGA IH DVMDG FVPNI+FG VI+++R+
Sbjct: 1 MSRKTLIAPSVLASDFSKLGDEVEAVAAAGADWIHLDVMDGHFVPNITFGPPVIKAIRNR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FDCHLMI+ D ++ A+AGCD +T H E+ PH+ RSL+TI +GKK GV++NP
Sbjct: 61 TKAFFDCHLMIAPADPYLAAFAEAGCDGLTVHAEAGPHLDRSLQTIRNLGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +++E V+D +D+ILIMTVNPGFGGQ I + + K+ + KAL+G R I +E+DGGV++
Sbjct: 121 TPESVVEYVLDRLDLILIMTVNPGFGGQAFIPAIVDKVTRVKALVGGRPIRIEIDGGVSA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV G++ F +Y + + ++ +A
Sbjct: 181 ETAPLVTAAGADVLVAGAAIFKGGSVEAYRQNIQAIRTAA 220
>gi|253690240|ref|YP_003019430.1| ribulose-phosphate 3-epimerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756818|gb|ACT14894.1| ribulose-phosphate 3-epimerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 225
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 141/218 (64%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTANVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI + EVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI ++ +AGAD+ V GS+ F + ++ +
Sbjct: 180 VKVENIGAIAEAGADMFVAGSAIFGHPDYRAVIDKMRN 217
>gi|114571464|ref|YP_758144.1| ribulose-5-phosphate 3-epimerase [Maricaulis maris MCS10]
gi|114341926|gb|ABI67206.1| ribulose-5-phosphate 3-epimerase [Maricaulis maris MCS10]
Length = 219
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 106/220 (48%), Positives = 146/220 (66%), Gaps = 3/220 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF++LG+E+ I AGA IH DVMDG FVPN++ G V+++LR +
Sbjct: 1 MVNPAIISPSILSADFAKLGDEVRAIDAAGADWIHIDVMDGHFVPNLTIGPAVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMI+ +D +I ADAG DIIT HPE+ PH R+++ I A G K G A+NP
Sbjct: 61 SKKPFDVHLMITPVDPYIQAFADAGADIITAHPEAGPHFHRTVQAIKATGAKAGAALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +++ V+DE+D+IL+M+VNPGFGGQ I S + KI KA I +R +S +EVDGGV
Sbjct: 121 TPVEVIDYVLDELDLILVMSVNPGFGGQSFITSQLKKIEALKARIDQRGLSTMIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + + AGA LV GS+ F G +Y ++ L++
Sbjct: 181 NPQTARDCLDAGASALVAGSAVFKG-GPDAYRDNISALRR 219
>gi|332558220|ref|ZP_08412542.1| ribulose-phosphate 3-epimerase [Rhodobacter sphaeroides WS8N]
gi|332275932|gb|EGJ21247.1| ribulose-phosphate 3-epimerase [Rhodobacter sphaeroides WS8N]
Length = 236
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 92/201 (45%), Positives = 129/201 (64%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R +
Sbjct: 5 RRIKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G+K G+A+NP T
Sbjct: 65 GVMDVHLMIAPVDPYIEAFAAAGADVITAHLEAGPHIHRTLQAIRGTGRKAGLALNPGTG 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + ++D +D++ IMTVNPGFGGQ+ I S + K+R +A+IG R I +E+DGGVT
Sbjct: 125 LDAVSHLLDLLDLVCIMTVNPGFGGQKFIASQVDKVRDLRAMIGDRPIHIEIDGGVTPET 184
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ AGAD+LV GS+ F
Sbjct: 185 APLVAAAGADVLVAGSAVFKG 205
>gi|157377391|ref|YP_001475991.1| ribulose-phosphate 3-epimerase [Shewanella sediminis HAW-EB3]
gi|157319765|gb|ABV38863.1| Ribulose-phosphate 3-epimerase [Shewanella sediminis HAW-EB3]
Length = 224
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 139/223 (62%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRMIPDFAKAGATFITFHPEASEHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI + EVDGG
Sbjct: 120 GTPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRKLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
V NI + AGAD+ V GS+ FN+ + + +L KS
Sbjct: 180 VKVDNIGEIAAAGADMFVAGSAIFNKPDYKAVIDEMRVELAKS 222
>gi|82703486|ref|YP_413052.1| ribulose-phosphate 3-epimerase [Nitrosospira multiformis ATCC
25196]
gi|82411551|gb|ABB75660.1| ribulose-5-phosphate 3-epimerase [Nitrosospira multiformis ATCC
25196]
Length = 227
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 141/223 (63%), Gaps = 5/223 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+F++LGEE+S + +GA IHFDVMD +VPN++ G V ++R +D++
Sbjct: 5 RIAPSILSANFAKLGEEVSAVIDSGADFIHFDVMDNHYVPNLTIGPLVCEAIRPVTDAII 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG +II+FHPE++ HI R++ I G G+ NP TP+
Sbjct: 65 DVHLMVEPVDRIVPDFAKAGANIISFHPEATRHIDRTIGLIKEQGCMAGLVFNPATPLNY 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D++LIM+VNPGFGGQ+ I +PK+R+ + I + RSI LE+DGGV NI
Sbjct: 125 LDHVLDKLDLVLIMSVNPGFGGQKFIPEALPKLREVRRRIDESGRSILLEIDGGVKVDNI 184
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLKKSALAI 223
+ +AGAD V GS+ + Y L+ L+ +
Sbjct: 185 AEIARAGADTFVAGSAIYSAGKDSDPHRYDTILSALRAELKKV 227
>gi|119899616|ref|YP_934829.1| putative ribulose-phosphate 3-epimerase [Azoarcus sp. BH72]
gi|119672029|emb|CAL95943.1| putative ribulose-phosphate 3-epimerase [Azoarcus sp. BH72]
Length = 233
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 139/228 (60%), Gaps = 9/228 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSIL+A+F+RLGEE+S + +GA IHFDVMD +VPN++ G V +LR + +
Sbjct: 2 FRIAPSILSANFARLGEEVSQVVASGADWIHFDVMDNHYVPNLTIGPLVCEALRPVTTAP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG +IITFHPE+S HI RSL I G + G+ NP TP+
Sbjct: 62 IDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRSLGLIRDSGCQAGLVFNPATPLH 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGV 178
++ V+D++D++L+M+VNPGFGGQ+ I T+ K+R A+A + R I LE+DGGV
Sbjct: 122 YMDHVMDKLDVVLLMSVNPGFGGQKFIPETLNKLRAARARLDAYEAQSGRRILLEIDGGV 181
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
NI + +AGAD V GS+ F Y + L+ A+
Sbjct: 182 KVDNIAEIARAGADTFVAGSAVFGAGKDSDPNRYDGVIGALRAELAAV 229
>gi|303256154|ref|ZP_07342170.1| ribulose-phosphate 3-epimerase [Burkholderiales bacterium 1_1_47]
gi|331000400|ref|ZP_08324076.1| ribulose-phosphate 3-epimerase [Parasutterella excrementihominis
YIT 11859]
gi|302860883|gb|EFL83958.1| ribulose-phosphate 3-epimerase [Burkholderiales bacterium 1_1_47]
gi|329571933|gb|EGG53610.1| ribulose-phosphate 3-epimerase [Parasutterella excrementihominis
YIT 11859]
Length = 231
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 100/224 (44%), Positives = 147/224 (65%), Gaps = 10/224 (4%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT +I PSIL+ADF+ LG+E+ ++ AGA IHFDVMD +VPN++ G V +++R
Sbjct: 5 MTKTKYRIAPSILSADFANLGKEVQDVIAAGADWIHFDVMDNHYVPNLTVGPMVCKAIRP 64
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
Y+++ D HLM+ ++D + + A AG +IITFHPE+S H+ R+LR I G K G+A+NP
Sbjct: 65 YTEAPIDVHLMVEAVDEIVPLFAKAGANIITFHPEASRHVDRTLRLIRDCGCKAGLALNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
T + L +D IDM+L+M+VNPGFGGQ I +TI K+++ ++L+ R + LE
Sbjct: 125 ATSLEYLHYELDNIDMVLLMSVNPGFGGQSFIPTTIGKLQECRSLLDSYAEVSGRKVLLE 184
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
VDGGV NI+ + AGAD V GS+ FN E Y ++D++
Sbjct: 185 VDGGVKKSNIREIAAAGADTFVAGSAIFN---EADYKAVIDDMR 225
>gi|209967299|ref|YP_002300214.1| ribulose-phosphate 3-epimerase [Rhodospirillum centenum SW]
gi|209960765|gb|ACJ01402.1| ribulose-phosphate 3-epimerase [Rhodospirillum centenum SW]
Length = 243
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 92/221 (41%), Positives = 139/221 (62%), Gaps = 7/221 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RLGEE+ + +AG IHFDVMD +VPN++ G V ++R + +
Sbjct: 10 RLAPSILSADFARLGEEVQRVVEAGCDVIHFDVMDNHYVPNLTIGPLVCEAIRPCTKAPI 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ + + A AG DII+FHPE+S H+ R+L I G + G+ +NP TP+
Sbjct: 70 DVHLMVRPVDALVPMFAKAGADIISFHPEASDHVDRTLALIRDQGCRAGLVLNPATPLHH 129
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEVDGGVT 179
L+ V+D +D+IL+M+VNPGFGGQ I S + KI + I + I LEVDGG+
Sbjct: 130 LDHVMDRLDLILVMSVNPGFGGQSFIPSALDKIAAIRRRIDAHTERTGAEIWLEVDGGIK 189
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKS 219
NI+++ AGAD V GS+ F + + Y + + L+ +
Sbjct: 190 PSNIRAVADAGADTFVAGSAIFGARDADGGYHEVVRALRAA 230
>gi|269961471|ref|ZP_06175835.1| Ribulose-phosphate 3-epimerase [Vibrio harveyi 1DA3]
gi|269833848|gb|EEZ87943.1| Ribulose-phosphate 3-epimerase [Vibrio harveyi 1DA3]
Length = 223
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 142/222 (63%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLSHLEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND-LKKS 219
NI+ + +AGAD+ V GS+ F ++ D L K+
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGHPDYKQVIDQMRDELAKA 222
>gi|114775450|ref|ZP_01451018.1| ribulose-phosphate 3-epimerase [Mariprofundus ferrooxydans PV-1]
gi|114553561|gb|EAU55942.1| ribulose-phosphate 3-epimerase [Mariprofundus ferrooxydans PV-1]
Length = 222
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 141/218 (64%), Gaps = 2/218 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF++LGEEI I + G IHFDVMDG FVP I+ G +V +++RS+
Sbjct: 1 MKKDLVIAPSILSADFAKLGEEIRAIDEGGCDWIHFDVMDGSFVPPITIGDNVCKAIRSH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM++ D+ + A+AG DIIT H E+ H+ R+L+ I ++GKK GV++NP
Sbjct: 61 TSKPIDVHLMVNHPDTQVEFFANAGADIITVHQEACTHLERTLQLIRSLGKKAGVSLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV+ ++ V+ +D++L+M+VNPG+GGQ I + PKIRQA+ ++ LEVDGGV
Sbjct: 121 TPVSTIQHVLHCVDLVLLMSVNPGYGGQSYIHAVTPKIRQARKMLDDAGCDAWLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ I + AGAD LV GS+ +N + L L
Sbjct: 181 NVKTIAEVSAAGADALVAGSAVYNTPDYAAAIAELRAL 218
>gi|293609196|ref|ZP_06691499.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829769|gb|EFF88131.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 228
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 105/227 (46%), Positives = 148/227 (65%), Gaps = 3/227 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D ILIM+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILIMSVNPGFGGQKFIPMTLEKLREARKVIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI+ + +AGAD+ V GS+ F Q ++ ++D
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKVVIDQMRAELAKVGSVD 227
>gi|332524773|ref|ZP_08400970.1| ribulose-phosphate 3-epimerase [Rubrivivax benzoatilyticus JA2]
gi|332108079|gb|EGJ09303.1| ribulose-phosphate 3-epimerase [Rubrivivax benzoatilyticus JA2]
Length = 220
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/217 (45%), Positives = 145/217 (66%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PS+L+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++LR +
Sbjct: 1 MT-TYRIAPSLLSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTFGPMVCQALRKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+++ D HLM+ +D+ A AG D+++FHP++S H+ R+L+ I A G + G+ NP
Sbjct: 60 TEAPIDVHLMVQPVDALATAFAKAGADLVSFHPDASTHVDRTLQLIKAEGCQAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
P+ +LE VID++D++LIM+VNPGFGGQ I+S + KI +A+ +I R I LEVDGG+
Sbjct: 120 EPLDVLEWVIDKVDLVLIMSVNPGFGGQSFIDSALRKIEKARRIIDASGRDIRLEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + AGAD V GS+ F Q + +
Sbjct: 180 KVDNIRRVADAGADTFVAGSAIFGQPDYAAVIAAMRA 216
>gi|237746956|ref|ZP_04577436.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes HOxBLS]
gi|229378307|gb|EEO28398.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes HOxBLS]
Length = 227
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 99/217 (45%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF++LG+E+ ++ AGA IHFDVMD +VPN++ G V ++R
Sbjct: 1 MT-TYRIAPSILSADFAQLGKEVRDVVAAGADMIHFDVMDNHYVPNLTIGPMVCSAIRPL 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG DII+FHPE+S HI R+L+ IH G K G+ NP
Sbjct: 60 VKVPIDVHLMVKPVDRLVPDFAKAGADIISFHPEASEHIDRTLQLIHDNGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L V+D++D+ILIM+VNPGFGGQ I + KI A+A+I R I LEVDGG+
Sbjct: 120 TPLDYLLHVMDKLDLILIMSVNPGFGGQSFIPHALKKIETARAMIDSSGRQIMLEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD V GS+ FN+ + +++ +
Sbjct: 180 KVENIAEVARAGADTFVSGSAIFNEPDYATVIRQMRE 216
>gi|254559679|ref|YP_003066774.1| D-ribulose-5-phosphate 3-epimerase [Methylobacterium extorquens
DM4]
gi|254266957|emb|CAX22756.1| D-ribulose-5-phosphate 3-epimerase [Methylobacterium extorquens
DM4]
Length = 227
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 4 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP + +
Sbjct: 64 VHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D +D++L+MTVNPGFGGQ I S++ + + KA+ RSI + VDGG+T
Sbjct: 124 EPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPETAGPA 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
QAGA++LV GS+ F G Y K + ++++A +
Sbjct: 184 AQAGANILVAGSAAFKG-GPTQYEKNVAAIREAAQSA 219
>gi|317049883|ref|YP_004117531.1| ribulose-phosphate 3-epimerase [Pantoea sp. At-9b]
gi|316951500|gb|ADU70975.1| ribulose-phosphate 3-epimerase [Pantoea sp. At-9b]
Length = 227
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 136/219 (62%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y
Sbjct: 1 MKQFLLAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDELIPAFAKAGASYITFHPEASQHVDRTLQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQA+ LI + + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLRQARRLIDQSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F Y K ++ ++
Sbjct: 181 KIDNIGQIAAAGADMFVAGSAIFGHPD---YKKVIDAMR 216
>gi|288928321|ref|ZP_06422168.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 317 str.
F0108]
gi|288331155|gb|EFC69739.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 317 str.
F0108]
Length = 217
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ADF L E+ I ++ A +H DVMDG FVPNISFG V+ ++
Sbjct: 1 MKKPL-IAPSLLSADFLNLNAEVQMINESEADWLHMDVMDGTFVPNISFGFPVLDAVGKA 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D H MI +++I A AG ++ H E+ H+ R++ IH G K GVA+NP
Sbjct: 60 CKKPMDVHFMIVHPENYIEQTAKAGAMLMCVHQEACVHLHRTVAKIHETGMKAGVALNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LED+I+++D++L+M+VNPGFGGQ+ IE+T+ K+++ + LI +EVDGGV
Sbjct: 120 TPVNVLEDIINDVDLVLLMSVNPGFGGQKFIENTLNKVKRLRQLIDSTGSKALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ L++AGAD+LV G+ F +L L
Sbjct: 180 QAQTAPLLIEAGADVLVAGNYVFKSANPKETIHQLKSL 217
>gi|311277679|ref|YP_003939910.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae SCF1]
gi|308746874|gb|ADO46626.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae SCF1]
Length = 225
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 141/225 (62%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRKYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAAAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + AGAD+ V GS+ F+Q Y K ++++++ +
Sbjct: 181 KVSNIAEIAAAGADMFVAGSAIFDQPD---YRKVVDEMRRELAKV 222
>gi|161505951|ref|YP_001573063.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160867298|gb|ABX23921.1| hypothetical protein SARI_04132 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 225
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGSSIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F + Y + +++++
Sbjct: 186 GEIAAAGADMFVAGSAIF---DKPDYKQVIDEMR 216
>gi|238783120|ref|ZP_04627146.1| Ribulose-phosphate 3-epimerase [Yersinia bercovieri ATCC 43970]
gi|238715916|gb|EEQ07902.1| Ribulose-phosphate 3-epimerase [Yersinia bercovieri ATCC 43970]
Length = 225
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 138/223 (61%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ F+Q + + +L SA
Sbjct: 181 KVDNIRQIAAAGADMFVAGSAIFSQPDYAAVIDAMRSELAMSA 223
>gi|238758718|ref|ZP_04619892.1| Ribulose-phosphate 3-epimerase [Yersinia aldovae ATCC 35236]
gi|238703015|gb|EEP95558.1| Ribulose-phosphate 3-epimerase [Yersinia aldovae ATCC 35236]
Length = 225
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 138/223 (61%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ FNQ + + +L SA
Sbjct: 181 KVDNIRDIAAAGADMFVAGSAIFNQPDYAAVIDAMRSELAMSA 223
>gi|323487014|ref|ZP_08092326.1| hypothetical protein HMPREF9474_04077 [Clostridium symbiosum
WAL-14163]
gi|323399662|gb|EGA92048.1| hypothetical protein HMPREF9474_04077 [Clostridium symbiosum
WAL-14163]
Length = 222
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 144/218 (66%), Gaps = 2/218 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL ADF RLGE++ + +AGA IH D+MDG FVP+ISFG +I SLRS ++
Sbjct: 2 IILAPSILGADFKRLGEQVQEVDRAGAPYIHLDIMDGTFVPSISFGMPLIESLRSCTNKT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ +++ + AG D+I H E+ H+ R++ I G TGVA+NP TPV+
Sbjct: 62 FDVHMMVEEPGRYVDDMKKAGADLICVHQEACTHLDRTINQIKEAGLMTGVALNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
L +++++DM+LIM+VNPGFGGQ+ I T+ KIR+ + L ++ + ++VDGG++ N
Sbjct: 122 TLSCILEQVDMVLIMSVNPGFGGQKFIPYTLGKIRELRNLCNEKGLATRIQVDGGISPAN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ +++AGAD++V GS+ F + L+ ++ A
Sbjct: 182 VRDVIEAGADVIVAGSAVFKGNPTENVKTFLDIFEEYA 219
>gi|254453062|ref|ZP_05066499.1| ribulose-phosphate 3-epimerase [Octadecabacter antarcticus 238]
gi|198267468|gb|EDY91738.1| ribulose-phosphate 3-epimerase [Octadecabacter antarcticus 238]
Length = 229
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 141/224 (62%), Gaps = 3/224 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ LG EI I GA IH D MDG FVPN++ G +V+ ++R +
Sbjct: 5 RSIKIAPSILSADFANLGAEIQAIEARGADWIHVDPMDGHFVPNLTIGPNVVAAIRPHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLMIS D +I A AG D+IT H E+ PH+ RSL+++ A GK GVA+N TP
Sbjct: 65 TFMDVHLMISPADPYIGAFAKAGSDMITVHAEAGPHLHRSLQSVRAEGKMAGVALNMTTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + D++D+IDMILIMT+NPGFGGQ+ + I K+ + +A+I R I ++VDGG+
Sbjct: 125 LDHVADILDDIDMILIMTINPGFGGQKFTHAMIDKVARCRAMIADRPIHIQVDGGIDPTT 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLKKSALAI 223
+ +AGA++LV GS+ F Y + ++ +A A
Sbjct: 185 APLVAKAGANVLVAGSAVFRGGSVAQPNIYGDNIRAIRDAAQAA 228
>gi|255020283|ref|ZP_05292351.1| Ribulose-phosphate 3-epimerase [Acidithiobacillus caldus ATCC
51756]
gi|254970203|gb|EET27697.1| Ribulose-phosphate 3-epimerase [Acidithiobacillus caldus ATCC
51756]
Length = 219
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I PSIL+ADF+RLGEE+ + +AGA IH DVMD FVPN++ G V++++R ++
Sbjct: 1 MSQFKISPSILSADFARLGEEVRAVDEAGADYIHVDVMDNHFVPNLTIGPVVVQAIRPHT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI+ +D+ I A AG +IIT HPE++ H+ RS++ I ++G K GV++NP T
Sbjct: 61 QKPLDVHLMITPVDAIIPEFAKAGANIITVHPEATIHLDRSIQLIKSLGCKAGVSLNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
P+++L+ +++ ID++L+M+VNPGFGGQ I+ ++ KI + I I LEVDGGV
Sbjct: 121 PLSVLDYILESIDLVLVMSVNPGFGGQSFIDYSLRKIEAIRKRIDATGKAIELEVDGGVK 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N++ + AGAD+ V GS+ +N +
Sbjct: 181 VDNVRRVADAGADVFVAGSAIYNTPDYRATIAAFRS 216
>gi|163744412|ref|ZP_02151772.1| ribulose-phosphate 3-epimerase [Oceanibulbus indolifex HEL-45]
gi|161381230|gb|EDQ05639.1| ribulose-phosphate 3-epimerase [Oceanibulbus indolifex HEL-45]
Length = 229
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 4/221 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSILAADF+ G E I GA +H DVMDG FVPNI+FG + ++R +
Sbjct: 5 RSIKIAPSILAADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPAMCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMIS +D +I+ A AG D+IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 GVMDVHLMISPVDPYIDAFAKAGADVITAHVEAGPHIHRTLQAIRGAGVKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + D++D D+I +MTVNPGFGGQ+ I+ T KIR + +IG R I +E+DGGV +
Sbjct: 125 ASAVADILDMTDLICVMTVNPGFGGQKFIDMT-AKIRTLREMIGDRPIHIEIDGGVDPKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSA 220
+ QAGAD+LV GS+ F Y + + ++ +A
Sbjct: 184 APLVAQAGADVLVAGSAAFKGGSVSNPAPYGENIRAIRAAA 224
>gi|261380240|ref|ZP_05984813.1| ribulose-phosphate 3-epimerase [Neisseria subflava NJ9703]
gi|284797097|gb|EFC52444.1| ribulose-phosphate 3-epimerase [Neisseria subflava NJ9703]
Length = 216
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 106/211 (50%), Positives = 145/211 (68%), Gaps = 7/211 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-DYRIAPSILSADFARLGEEVAEVIRAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I+ A AG +IITFHPE+S HI RSL I G + G+ +NP
Sbjct: 60 ATVPVDVHLMVEPVDDLIHAFAKAGANIITFHPEASRHIDRSLGLIKEYGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV ILE+V+D++DM+L+M+VNPGFGGQ I +T+ KIR+ + ++ + R I+LEV
Sbjct: 120 TPVNILENVLDKLDMVLLMSVNPGFGGQSFIPNTLVKIRKVREMLDEYERQSGRHIALEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
DGGV + NI + AGAD V GS+ F Q G
Sbjct: 180 DGGVKTDNIAEIAAAGADTFVAGSAIFWQTG 210
>gi|255282552|ref|ZP_05347107.1| ribulose-phosphate 3-epimerase [Bryantella formatexigens DSM 14469]
gi|255266845|gb|EET60050.1| ribulose-phosphate 3-epimerase [Bryantella formatexigens DSM 14469]
Length = 217
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF LGE+I +AGA IH DVMDG FVP+ISFG V+ S+R + +FD
Sbjct: 5 LAPSILAADFCVLGEQIREADEAGADYIHIDVMDGMFVPSISFGMPVVSSIRRATGKLFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ + ++ A G D IT H E H+ R+L+ I +G + GVA+NP TP++ L
Sbjct: 65 VHMMVQDPERYLKDFAACGADSITVHAECCRHLDRTLQEIRELGLRAGVALNPATPLSYL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
+ V+D+ DM+L+MTVNPGFGGQ IES++ KIR + + + + +EVDGG+ + +
Sbjct: 125 DYVLDKTDMVLLMTVNPGFGGQAFIESSLEKIRTLRQRLDAQGLETDIEVDGGINRKTLP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+++AGA+++V GS+ F K + +LK+
Sbjct: 185 RVLEAGANVIVAGSAVFGG----DICKNVKELKE 214
>gi|332528012|ref|ZP_08404046.1| ribulose-phosphate 3-epimerase [Rubrivivax benzoatilyticus JA2]
gi|332112586|gb|EGJ12379.1| ribulose-phosphate 3-epimerase [Rubrivivax benzoatilyticus JA2]
Length = 225
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ + AGA IHFDVMD +VPN++FG V ++LR ++++
Sbjct: 3 RIAPSILSADFARLGEEVRAVVAAGADWIHFDVMDNHYVPNLTFGPMVCQALRKHTEAPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ A AG D+++FHP++S H+ R+L+ I A G + G+ NP P+ +
Sbjct: 63 DVHLMVQPVDALATAFAKAGADLVSFHPDASTHVDRTLQLIKAEGCQAGLVFNPAEPLDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE VID++D++LIM+VNPGFGGQ I+S + KI +A+ I R I LEVDGG+ NI
Sbjct: 123 LEWVIDKVDLVLIMSVNPGFGGQSFIDSALRKIEKARRTIDASGRDIRLEVDGGIKVDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + AGAD V GS+ F Q + +
Sbjct: 183 RRVADAGADTFVAGSAIFGQPDYAAVIAAMRA 214
>gi|260774705|ref|ZP_05883609.1| ribulose-phosphate 3-epimerase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609361|gb|EEX35512.1| ribulose-phosphate 3-epimerase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 223
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 143/222 (64%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADMARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE ++D+IDMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLSHLEYIMDKIDMILLMSVNPGFGGQSFIPKTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
NI+ + +AGAD+ V GS+ FNQ ++ +L K+
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFNQPDYKEVIDQMRAELAKA 222
>gi|85704806|ref|ZP_01035907.1| Pentose-5-phosphate-3-epimerase [Roseovarius sp. 217]
gi|85670624|gb|EAQ25484.1| Pentose-5-phosphate-3-epimerase [Roseovarius sp. 217]
Length = 233
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 3/214 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
SI+I PSIL+ADF+ G EI I G +H DVMDG FVPN++FG + ++R +
Sbjct: 4 NRSIKIAPSILSADFANFGAEIRAIEAEGCDWVHVDVMDGHFVPNLTFGPPLCAAIRPHI 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLMIS +D +I+ A AG DI+T H E+ PHI R+L+ I G K G+A+NP T
Sbjct: 64 KTVMDVHLMISPVDPYIDAFAQAGADILTAHLEAGPHIHRTLQAIRGAGCKAGLALNPGT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ ++ ++D +D+I +MTVNPGFGGQ+ I S I K+++ +A+IG R I +E+DGG+T+
Sbjct: 124 GIDAVDHLLDMVDLICVMTVNPGFGGQKFIHSQIDKVKRLRAMIGDRPIHIEIDGGITTE 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQ---KGEISYAKR 212
+ AGAD+LV GS+ F Y +
Sbjct: 184 TAPLMAAAGADVLVAGSAVFKGGSVDNPAVYGEN 217
>gi|116695334|ref|YP_840910.1| ribulose-phosphate 3-epimerase [Ralstonia eutropha H16]
gi|729235|sp|P40117|RPEC_RALEH RecName: Full=Ribulose-phosphate 3-epimerase, chromosomal; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|304019|gb|AAA21962.1| D-ribulose-5-phosphate 3 epimerase [Ralstonia eutropha H16]
gi|113529833|emb|CAJ96180.1| Ribulose-phosphate 3-epimerase [Ralstonia eutropha H16]
Length = 241
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 144/225 (64%), Gaps = 7/225 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+I++ PSIL+ADF+RLGEE+ I GA +HFDVMD +VPN++ G V ++R
Sbjct: 14 RAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPLVS 73
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D+ I + A AG +II+FHPE+S H+ R++ I G K G+ +NP TP
Sbjct: 74 IPIDVHLMVEPVDALIPLFAKAGANIISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATP 133
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDG 176
+ L+ +D++D++L+M+VNPGFGGQ I + K+RQA+A I + R + LE+DG
Sbjct: 134 LGWLDHTLDQLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVDAGGRPVWLEIDG 193
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSA 220
GV + NI ++ +AGAD V GS+ F + Y+ L L+++A
Sbjct: 194 GVKADNIAAIARAGADTFVAGSAVFGAPDADGGYSSILYRLREAA 238
>gi|307731096|ref|YP_003908320.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1003]
gi|307585631|gb|ADN59029.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1003]
Length = 227
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 137/228 (60%), Gaps = 11/228 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VDVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T + L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEV
Sbjct: 120 TSLNYLDHVMDKLDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYKERTGREIHLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGGV NI + AGAD V GS+ F Q ++ +ALA
Sbjct: 180 DGGVKVDNIAEIAAAGADTFVAGSAIFGQPDHKVVIDKMR----AALA 223
>gi|226355692|ref|YP_002785432.1| ribulose-phosphate 3-epimerase [Deinococcus deserti VCD115]
gi|226317682|gb|ACO45678.1| putative ribulose-phosphate 3-epimerase [Deinococcus deserti
VCD115]
Length = 235
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 137/214 (64%), Gaps = 4/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++ PS+LA DF+RLGEE+ I GA H DVMDG FVPNISFG ++ + R S
Sbjct: 21 PVKLAPSLLACDFARLGEELQAIQ--GADWAHVDVMDGAFVPNISFGLPILAAARRASSL 78
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A+AG D +T H ES+PH+ R+++ I +GKK GV +NP TP+
Sbjct: 79 FMDVHLMIQHPERYLRDFAEAGADGLTVHVESTPHLHRAVQQIRELGKKAGVTLNPGTPL 138
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
L V+ ++D++LIM+VNPGFGGQ+ I S++ +IR + + ++VDGGVT +
Sbjct: 139 EALRPVLADVDLVLIMSVNPGFGGQKFIPSSLERIRTLRRWLDDLGSAAEIQVDGGVTPQ 198
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N +++V AGA LV GS+ + G + +RL +
Sbjct: 199 NARAVVHAGATCLVAGSAVYGPDGAQAGLERLRE 232
>gi|297569928|ref|YP_003691272.1| ribulose-phosphate 3-epimerase [Desulfurivibrio alkaliphilus AHT2]
gi|296925843|gb|ADH86653.1| ribulose-phosphate 3-epimerase [Desulfurivibrio alkaliphilus AHT2]
Length = 225
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE++ AGA IH DVMDG FVPNI+ G V+ ++R +D D
Sbjct: 12 IAPSILSADFARLGEEVTAAAAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKITDLPLD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + H+ A AG D IT H E+ H+ R++ I +GKK GV +NP TP+ L
Sbjct: 72 VHLMIEEPERHLEAFAAAGADWITVHVETGYHLHRTVHKIKELGKKAGVVLNPATPLNAL 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ ++ ++D++++M+VNPGFGGQ I S + K R K +I +R + +E+DGGV+ ++I
Sbjct: 132 DYLLADVDLVMLMSVNPGFGGQSFIPSALEKTRALKQMITERGLQTAIEIDGGVSPKSIG 191
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ +AGA++ V GS+ F Q + + + ++
Sbjct: 192 AIREAGANIFVAGSAIFGQPDYAAVIRAMKEI 223
>gi|188590694|ref|YP_001920568.1| ribulose-phosphate 3-epimerase [Clostridium botulinum E3 str.
Alaska E43]
gi|251778393|ref|ZP_04821313.1| ribulose-phosphate 3-epimerase [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|188500975|gb|ACD54111.1| ribulose-phosphate 3-epimerase [Clostridium botulinum E3 str.
Alaska E43]
gi|243082708|gb|EES48598.1| ribulose-phosphate 3-epimerase [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 214
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 148/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFSRLGE+I I KAGA+ IH DVMDG FVPNISFG +++S+R+ ++ V
Sbjct: 2 VKIAPSILSADFSRLGEDIERIDKAGAEFIHIDVMDGSFVPNISFGFPIMKSIRNKTEKV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I+ +AG D+IT H E+ HI R+++ I + GK+ +A+NP TP
Sbjct: 62 FDVHLMIENPSKYIDDFIEAGADLITVHYEADRHIDRTIQYIKSKGKRAAIALNPGTPTM 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRN 182
+L+D+I ++DM+LIM+VNPGFGGQ+ I ++ KI++ K + S+ ++VDGGV S N
Sbjct: 122 VLKDLIPQLDMVLIMSVNPGFGGQKFIPYSLEKIKEVKEMSKHSNPSLLIQVDGGVDSSN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +V+AGA+++V GS+ F + L
Sbjct: 182 ISEVVEAGANVIVAGSAVFKGGNIEENIEALR 213
>gi|297195551|ref|ZP_06912949.1| ribulose-phosphate 3-epimerase [Streptomyces pristinaespiralis ATCC
25486]
gi|197721373|gb|EDY65281.1| ribulose-phosphate 3-epimerase [Streptomyces pristinaespiralis ATCC
25486]
Length = 228
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 129/214 (60%), Gaps = 4/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADFSRL EE + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFSRLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLAKATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEDPDRWAPRYIEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALRPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLQLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ +AGAD+ V GS+ + ++L D
Sbjct: 180 TIEQCAEAGADVFVAGSAVYGADDPAEAVRKLRD 213
>gi|262281470|ref|ZP_06059250.1| ribulose-phosphate 3-epimerase [Acinetobacter calcoaceticus
RUH2202]
gi|262257058|gb|EEY75796.1| ribulose-phosphate 3-epimerase [Acinetobacter calcoaceticus
RUH2202]
Length = 228
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 148/227 (65%), Gaps = 3/227 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGICKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D ILIM+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILIMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI+ + +AGAD+ V GS+ F Q ++ ++D
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKVVIDQMRAELAKVGSVD 227
>gi|126462198|ref|YP_001043312.1| ribulose-phosphate 3-epimerase [Rhodobacter sphaeroides ATCC 17029]
gi|126103862|gb|ABN76540.1| ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides ATCC
17029]
Length = 236
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 92/201 (45%), Positives = 129/201 (64%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R +
Sbjct: 5 RRIKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G+K G+A+NP T
Sbjct: 65 GVMDVHLMIAPVDPYIEAFAAAGADVITAHLEAGPHIHRTLQAIRGTGRKAGLALNPGTG 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + ++D +D++ IMTVNPGFGGQ+ I S + K+R +A+IG R I +E+DGGVT
Sbjct: 125 LDAVSHLLDLLDLVCIMTVNPGFGGQKFIASQVDKVRDLRAMIGDRPIHIEIDGGVTPET 184
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ AGAD+LV GS+ F
Sbjct: 185 APLVAAAGADVLVAGSAVFKG 205
>gi|115450991|ref|NP_001049096.1| Os03g0169100 [Oryza sativa Japonica Group]
gi|109940150|sp|Q9ZTP5|RPE_ORYSJ RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
AltName: Full=Pentose-5-phosphate 3-epimerase;
Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
Precursor
gi|19071636|gb|AAL84303.1|AC073556_20 ribulose-5-phosphate-3-epimerase [Oryza sativa Japonica Group]
gi|108706393|gb|ABF94188.1| Ribulose-phosphate 3-epimerase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113547567|dbj|BAF11010.1| Os03g0169100 [Oryza sativa Japonica Group]
gi|215692683|dbj|BAG88103.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215694711|dbj|BAG89902.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708731|dbj|BAG94000.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192168|gb|EEC74595.1| hypothetical protein OsI_10180 [Oryza sativa Indica Group]
gi|222624266|gb|EEE58398.1| hypothetical protein OsJ_09567 [Oryza sativa Japonica Group]
Length = 274
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 140/226 (61%), Gaps = 7/226 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 48 KNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 107
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 108 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNP 167
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++ V+D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGG
Sbjct: 168 ATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRLCAEKGVNPWIEVDGG 227
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V +N +++AGA+ +V GS+ F YA+ + +K S +
Sbjct: 228 VGPKNAYKVIEAGANAIVAGSAVFGAPD---YAEAIKGIKTSQKPV 270
>gi|152972265|ref|YP_001337411.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896854|ref|YP_002921599.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae NTUH-K2044]
gi|150957114|gb|ABR79144.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549181|dbj|BAH65532.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 225
Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV + NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGVKASNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F Q Y + ++ ++
Sbjct: 186 GEIAAAGADMFVAGSAIFGQPD---YKQVIDQMR 216
>gi|16124356|ref|NP_418920.1| ribulose-phosphate 3-epimerase [Caulobacter crescentus CB15]
gi|221233039|ref|YP_002515475.1| ribulose-phosphate 3-epimerase [Caulobacter crescentus NA1000]
gi|13421204|gb|AAK22088.1| ribulose-phosphate 3-epimerase [Caulobacter crescentus CB15]
gi|220962211|gb|ACL93567.1| ribulose-phosphate 3-epimerase [Caulobacter crescentus NA1000]
Length = 226
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 140/219 (63%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSILA+DF++LGEE++ I AGA +H DVMDG FVPNI+ G D+++++R +
Sbjct: 8 MTAPI-IAPSILASDFAKLGEEVAAIEAAGADWVHVDVMDGHFVPNITLGPDIVKAIRPH 66
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS D ++ AG D+I+ HPE+ PH+ RSL+ I +G K GV NP
Sbjct: 67 AKIPFDVHLMISPADPYLEAFRAAGADLISIHPEAGPHLHRSLKRIRELGAKAGVVFNPS 126
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + +E +++++D++L+M+VNPGFGGQ I + K+ + ++ K + +EVDGGV
Sbjct: 127 TGIDHVEWILEDVDLLLVMSVNPGFGGQSFIPGQLRKVEALRKMVDKAGLDIIIEVDGGV 186
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
T V AGA LV GS+ F G +YA + LK
Sbjct: 187 TPVTAPQCVAAGATALVAGSAVFKG-GPAAYADNIRALK 224
>gi|121602542|ref|YP_989143.1| ribulose-phosphate 3-epimerase [Bartonella bacilliformis KC583]
gi|120614719|gb|ABM45320.1| ribulose-phosphate 3-epimerase [Bartonella bacilliformis KC583]
Length = 230
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 112/220 (50%), Positives = 155/220 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS+L+ADFS+LG+EIS++ AGA +H D+MDG FVPNI+FG D +++LR
Sbjct: 1 MVHSPIIAPSLLSADFSKLGQEISDVVDAGADWLHLDIMDGHFVPNITFGPDTVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S +VFD HLMIS +D ++ A AG DIIT H E+ PHI RSL+ I MGKK G+AINP
Sbjct: 61 SKAVFDVHLMISPVDPYLEAFAKAGADIITIHAEAGPHIHRSLQIIKIMGKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFGGQ I KI++ K +I RSI LEVDGG++
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGGQNFIPEMKDKIKRIKNMIANRSIDLEVDGGISV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + +AGA++ V GS+ + + Y R+++L+++A
Sbjct: 181 DTIGTAAKAGANVFVAGSAIYKNGNKDLYKTRISELRQAA 220
>gi|71276385|ref|ZP_00652662.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Dixon]
gi|71898632|ref|ZP_00680802.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Ann-1]
gi|170729410|ref|YP_001774843.1| ribulose-phosphate 3-epimerase [Xylella fastidiosa M12]
gi|71162847|gb|EAO12572.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Dixon]
gi|71731579|gb|EAO33640.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Ann-1]
gi|167964203|gb|ACA11213.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa M12]
Length = 223
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 140/225 (62%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY
Sbjct: 1 MSNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG +I+FH E+S H+ R+++ I + G G+ NP
Sbjct: 61 ITAPIDVHLMVEPVDRIVPDFAQAGASMISFHIEASRHVHRTIQLIKSHGCMAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TPV +L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + I R + LEVDGGV
Sbjct: 121 TPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLGRPVRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI ++ +AGAD V GS+ F+ + Y + ++ A+
Sbjct: 181 GIDNIGAIAEAGADTFVAGSAIFHARD---YGDVIAQMRAVVAAV 222
>gi|310659151|ref|YP_003936872.1| d-ribulose-5-phosphate 3-epimerase [Clostridium sticklandii DSM
519]
gi|308825929|emb|CBH21967.1| D-ribulose-5-phosphate 3-epimerase [Clostridium sticklandii]
Length = 218
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 102/213 (47%), Positives = 145/213 (68%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADFS L +I + AG + +H DVMDG FVPNI+ G VI +L+ D V
Sbjct: 2 IKLAPSILSADFSNLLSDIKVVEDAGCEYLHIDVMDGHFVPNITIGPPVINALKGKIDMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I +DAG D+I H E+ H+ R++++I A+GKK GVA+NP TP+
Sbjct: 62 FDVHLMIENPDKYIEAFSDAGADLIVVHQEACTHLHRTIQSIKALGKKAGVALNPATPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
++ +I +IDM+LIMTVNPGFGGQ+ IES IPKI++ K+L K +I ++VDGG+T N
Sbjct: 122 TIKHIIHDIDMVLIMTVNPGFGGQKFIESMIPKIKELKSLCLKENVNIDIQVDGGITPEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K +V AGA+++V GS+ F K +
Sbjct: 182 VKKVVSAGANIIVAGSAIFGSNDIKQTVKLFRE 214
>gi|126664686|ref|ZP_01735670.1| ribulose-phosphate 3-epimerase [Marinobacter sp. ELB17]
gi|126631012|gb|EBA01626.1| ribulose-phosphate 3-epimerase [Marinobacter sp. ELB17]
Length = 228
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 142/226 (62%), Gaps = 4/226 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MNPYL-IAPSILSADFARLGEEVDNVLAAGADVVHFDVMDNHYVPNLTIGPMVCEALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I DAG ITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDDLIRKFMDAGASYITFHPEASQHVDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
T + ++ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ I +I LE+DGG
Sbjct: 120 ATSLQYMDYVMDKLDMVLVMSVNPGFGGQKFIPGTLDKLREARKRIDASDYNIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI+ + +AGAD V GS+ FN + + + A I
Sbjct: 180 VKTDNIREIAEAGADTFVAGSAIFNTDDYKATIDAMRAELEHASKI 225
>gi|238792892|ref|ZP_04636522.1| Ribulose-phosphate 3-epimerase [Yersinia intermedia ATCC 29909]
gi|238727746|gb|EEQ19270.1| Ribulose-phosphate 3-epimerase [Yersinia intermedia ATCC 29909]
Length = 225
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITVPIDVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDASGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ F+Q + + +L SA
Sbjct: 181 KVDNIRQIAAAGADMFVAGSAIFSQPDYAAVIDAMRSELAMSA 223
>gi|327395547|dbj|BAK12969.1| ribulose-phosphate 3-epimerase Rpe [Pantoea ananatis AJ13355]
Length = 227
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 139/215 (64%), Gaps = 6/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDALIPEFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + SI LEVDGGV NI
Sbjct: 126 LDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLREARKRIDQSGYSIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGAD+ V GS+ F Y K ++D++
Sbjct: 186 GQIAAAGADMFVAGSAIFGHPD---YKKVIDDMRN 217
>gi|145298157|ref|YP_001140998.1| ribulose-phosphate 3-epimerase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850929|gb|ABO89250.1| ribulose-phosphate 3-epimerase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 224
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLG++++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGDDVARVLTAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM+ +D + A AG ++ITFHPE+S H+ R+L I G + G+ +NP
Sbjct: 61 IKALIDVHLMVKPVDRIVPDFAKAGANLITFHPEASDHVDRTLGLIKEQGCQAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++ LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + R I LE+DGGV
Sbjct: 121 TSLSCLEYVMDKLDVILLMSVNPGFGGQSFIPGTLDKLRQVRRLIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+++ +AGAD+ V GS+ F+Q + ++
Sbjct: 181 KVDNIRAIAEAGADMFVAGSAIFSQPDYKAVIDQMRA 217
>gi|262045220|ref|ZP_06018246.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330012383|ref|ZP_08307362.1| ribulose-phosphate 3-epimerase [Klebsiella sp. MS 92-3]
gi|259037430|gb|EEW38675.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328533844|gb|EGF60519.1| ribulose-phosphate 3-epimerase [Klebsiella sp. MS 92-3]
Length = 227
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 8 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ RSL+ I G K G+ NP TP++
Sbjct: 68 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATPLSY 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV + NI
Sbjct: 128 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGVKASNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F Q Y + ++ ++
Sbjct: 188 GEIAAAGADMFVAGSAIFGQPD---YKQVIDQMR 218
>gi|212634890|ref|YP_002311415.1| Ribulose-phosphate 3-epimerase [Shewanella piezotolerans WP3]
gi|212556374|gb|ACJ28828.1| Ribulose-phosphate 3-epimerase [Shewanella piezotolerans WP3]
Length = 224
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 143/227 (62%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRLIPDFAKAGASIITFHPEASEHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI + EVDGG
Sbjct: 120 GTPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRKLIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ FN+ Y +++++ +++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNKPD---YKAVIDEMRAELASVE 223
>gi|148259838|ref|YP_001233965.1| ribulose-phosphate 3-epimerase [Acidiphilium cryptum JF-5]
gi|146401519|gb|ABQ30046.1| ribulose-5-phosphate 3-epimerase [Acidiphilium cryptum JF-5]
Length = 225
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 105/217 (48%), Positives = 146/217 (67%), Gaps = 1/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ LG E + +AGA +H DVMDG FVPN++FG VI ++R + D+VFD
Sbjct: 9 IAPSILSADFATLGAEARAVIEAGADWVHIDVMDGHFVPNLTFGPPVIGAVRKHVDAVFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D I+ +AG DIIT H E+ PH+ R++++I A G + GVA+ P TP A L
Sbjct: 69 VHLMIAPVDPFIDAFVEAGADIITVHAEACPHLDRTVQSIRARGCRAGVALCPATPEAAL 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
V+D +D++L+MTVNPGFGGQ + S +PKIR+ + +I R I LE+DGG+T
Sbjct: 129 SYVLDAVDLVLVMTVNPGFGGQTFLRSQLPKIRRIREMIAGRDIRLELDGGITPETAPDA 188
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V AGAD+LV GSS F G +YA + L+ +A+
Sbjct: 189 VAAGADVLVAGSSVFRG-GRAAYAANIAALRAGGMAL 224
>gi|262401914|ref|ZP_06078479.1| ribulose-phosphate 3-epimerase [Vibrio sp. RC586]
gi|262351886|gb|EEZ01017.1| ribulose-phosphate 3-epimerase [Vibrio sp. RC586]
Length = 224
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 145/224 (64%), Gaps = 4/224 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVAKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G + GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKECGCQAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++D+IL+M+VNPGFGGQ I T+ K+R + I + R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDLILLMSVNPGFGGQSFISHTLDKLRAVRERIKQSGRPIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSAL 221
NI+ + +AGAD+ V GS+ F Q + +++ +L K+ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPDYQAVIEQMRAELAKAKI 224
>gi|261823286|ref|YP_003261392.1| ribulose-phosphate 3-epimerase [Pectobacterium wasabiae WPP163]
gi|261607299|gb|ACX89785.1| ribulose-phosphate 3-epimerase [Pectobacterium wasabiae WPP163]
Length = 225
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 141/218 (64%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTANVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI + EVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI ++ +AGAD+ V GS+ F + ++ +
Sbjct: 180 VKVDNIGAIAEAGADMFVAGSAIFGHPDYRTVIDQMRN 217
>gi|227112147|ref|ZP_03825803.1| ribulose-phosphate 3-epimerase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 225
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 140/218 (64%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTANVLAAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG ITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFANAGASFITFHPEATDHLDRSLQLIKDHGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI + EVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPSTLDKLRQVRRLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI ++ +AGAD+ V GS+ F + ++
Sbjct: 180 VKVDNIGAIAEAGADMFVAGSAIFGHPDYRAVIDQMRS 217
>gi|56477798|ref|YP_159387.1| ribulose-phosphate 3-epimerase [Aromatoleum aromaticum EbN1]
gi|56313841|emb|CAI08486.1| Ribulose-phosphate 3-epimerase [Aromatoleum aromaticum EbN1]
Length = 231
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 95/227 (41%), Positives = 138/227 (60%), Gaps = 9/227 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R ++ +
Sbjct: 3 RIAPSLLSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHTSAPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG +IITFHPE+S H+ R+L+ I G + G+ NP TP+
Sbjct: 63 DVHLMVKPVDRIVPDFAKAGANIITFHPEASEHVDRTLQLIRDCGCQAGLVFNPATPLHH 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
L+ V+D ID++L+M+VNPGFGGQ+ I T+PK+R A+ + R I L++DGGV
Sbjct: 123 LDHVLDSIDIVLLMSVNPGFGGQKFIPGTLPKLRAAREKLDAYEAASGRRILLQIDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
NI + AGAD V GS+ F Y + L+ +
Sbjct: 183 VDNIAQIAAAGADTFVAGSAVFGAGRDADPHRYDSVIAALRAELAKV 229
>gi|238926262|ref|ZP_04658022.1| ribulose-phosphate 3-epimerase [Selenomonas flueggei ATCC 43531]
gi|238885942|gb|EEQ49580.1| ribulose-phosphate 3-epimerase [Selenomonas flueggei ATCC 43531]
Length = 236
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/215 (46%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+ LG E+ + +AGA+ IH DVMDG FVPNI+ GA V+ SLR S
Sbjct: 21 ERPTIIAPSILSADFANLGAEVRRVEEAGAEYIHIDVMDGTFVPNITMGACVVESLRKVS 80
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+VFD HLM+ ++HI A AG DIITFH E++ H R ++ I A G + GVA+NP T
Sbjct: 81 KAVFDVHLMVEHPETHIESFARAGADIITFHVEATRHAHRVIQQIKAAGCRAGVALNPGT 140
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
+ LE++ID++DM+L+MTVNPGFGGQ+ IE+T+ KI I + ++ +EVDGG+
Sbjct: 141 SIYTLEELIDDVDMVLLMTVNPGFGGQKFIENTLGKIHALYHTIEGNELNVDIEVDGGIN 200
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +S+ AGA++LV GS + + L
Sbjct: 201 AETAESVRSAGANVLVAGSYIYGAADVSAAIASLR 235
>gi|332971601|gb|EGK10551.1| ribulose-phosphate 3-epimerase [Kingella kingae ATCC 23330]
Length = 224
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 105/216 (48%), Positives = 142/216 (65%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + +LR ++
Sbjct: 4 RIAPSILSADFARLGEEVRNVIAAGADLIHFDVMDNHYVPNLTFGPMICAALRPHATMPI 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D IN AG DIITFHPE+S HI RSL+ I GK+ G+ +NP TP+ I
Sbjct: 64 DVHLMVEPVDDMINAFLHAGADIITFHPEASKHIDRSLQLIKNAGKQAGLVLNPATPIHI 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
LE V+D++DM+L+M+VNPGFGGQ I T+ K+RQ + L+ R I+LEVDGG+
Sbjct: 124 LEHVLDKLDMVLLMSVNPGFGGQAFIPHTLDKLRQTRQLLDAYQAQTGRRIALEVDGGIK 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ NI QAGAD V GS+ F +++ D
Sbjct: 184 TDNIAQAAQAGADTFVAGSAIFGAADYAQVIQQMRD 219
>gi|325276058|ref|ZP_08141871.1| ribulose-phosphate 3-epimerase [Pseudomonas sp. TJI-51]
gi|324098812|gb|EGB96845.1| ribulose-phosphate 3-epimerase [Pseudomonas sp. TJI-51]
Length = 224
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 141/223 (63%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPYA-IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIKDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ V+D+IDM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATSLDALKYVMDKIDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
V NI+ + AGAD V GS+ FN ++ +L ++
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYQEVIAKMRAELAQA 222
>gi|308188402|ref|YP_003932533.1| D-ribulose-5-phosphate 3-epimerase [Pantoea vagans C9-1]
gi|308058912|gb|ADO11084.1| D-ribulose-5-phosphate 3-epimerase [Pantoea vagans C9-1]
Length = 227
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 139/215 (64%), Gaps = 6/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+ + AG +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 LAPSILSADFARLGEDTAKALAAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDALIPEFAKAGATYITFHPEASEHVDRTLQLIKEHGCKAGMVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + ++ EVDGGV NI
Sbjct: 126 LDYVMDKLDIILLMSVNPGFGGQSFIPGTLDKLREARRRIDQSGYNIRLEVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + AGAD+ V GS+ F Y K ++D++
Sbjct: 186 REIAAAGADMFVAGSAIFGHPD---YKKVIDDMRN 217
>gi|224026560|ref|ZP_03644926.1| hypothetical protein BACCOPRO_03317 [Bacteroides coprophilus DSM
18228]
gi|224019796|gb|EEF77794.1| hypothetical protein BACCOPRO_03317 [Bacteroides coprophilus DSM
18228]
Length = 219
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 133/219 (60%), Gaps = 2/219 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+L+ADF L ++ I + A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKNEILISPSLLSADFGNLKADLDKINASEADWLHIDIMDGVFVPNISFGFPVLKYVAEL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + I + D G ++ H E+ PH+ R ++ I G K GV +NP
Sbjct: 61 SKKPLDVHLMIVQPEKFIREVKDLGAMMMNVHFEACPHLHRVVQQIKEAGMKAGVTLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++L D+I+E+DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI +EVDGGV
Sbjct: 121 TPVSMLADIIEEVDMVLLMSVNPGFGGQKFIPHTLKKVRELRELITATGSHALIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ SL++AGAD+LV G++ F I +L ++K
Sbjct: 181 NLQTAPSLIEAGADVLVAGNAVFKADDMIGTIHQLKNMK 219
>gi|94987857|ref|YP_595958.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS9429]
gi|94991739|ref|YP_599838.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS2096]
gi|94541365|gb|ABF31414.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS9429]
gi|94545247|gb|ABF35294.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS2096]
Length = 220
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGTLQKIKAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P LE ++D +D +LIMTVNPGFGGQ I + K+ ++ + +EVDGGV
Sbjct: 121 PATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ I++ +AGA++ V GS F +S + L
Sbjct: 181 NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215
>gi|254488272|ref|ZP_05101477.1| ribulose-phosphate 3-epimerase [Roseobacter sp. GAI101]
gi|214045141|gb|EEB85779.1| ribulose-phosphate 3-epimerase [Roseobacter sp. GAI101]
Length = 229
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 142/228 (62%), Gaps = 6/228 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT SI+I PSILAADF+ G E + + GA +H DVMDG FVPNISFG ++R
Sbjct: 1 MTFDRSIKIAPSILAADFANFGAECAAVEAQGADWVHVDVMDGHFVPNISFGPTTCAAIR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ + D HLMI+ +D +I+ A AG D IT H E+ PHI R+L+ I G K GVA+N
Sbjct: 61 PHIKGIMDVHLMIAPVDPYIDAFAQAGADFITAHVEAGPHIHRTLQAIRGAGAKAGVALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TP + +E ++D D++ +MTVNPGFGGQ+ I+ T KI+ +A+IG R + +E+DGGV
Sbjct: 121 PGTPASAVEHLLDITDLVCVMTVNPGFGGQKFIDMT-DKIKTLRAMIGDRPVHIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
++ +AGAD+LV GS+ F Y + ++++A +
Sbjct: 180 DVNTAPTVAKAGADVLVAGSAVFRGGSVTNPGPYGDNIRAIREAASGV 227
>gi|262369161|ref|ZP_06062490.1| ribulose-phosphate 3-epimerase [Acinetobacter johnsonii SH046]
gi|262316839|gb|EEY97877.1| ribulose-phosphate 3-epimerase [Acinetobacter johnsonii SH046]
Length = 228
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 102/226 (45%), Positives = 151/226 (66%), Gaps = 6/226 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ ++ AGA +HFDVMD +VPN++FGA + ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVEHVLAAGADVVHFDVMDNHYVPNLTFGAGICKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GIKAPIDVHLMVKPVDRMIGDFLEAGADIITFHPEASDHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLDKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V+ NI+ + +AGAD+ V GS+ F + Y ++D++ +
Sbjct: 181 VSPANIREIAEAGADMFVAGSAIFGKPD---YKVVIDDMRAELAKV 223
>gi|229822827|ref|ZP_04448897.1| hypothetical protein GCWU000282_00116 [Catonella morbi ATCC 51271]
gi|229787640|gb|EEP23754.1| hypothetical protein GCWU000282_00116 [Catonella morbi ATCC 51271]
Length = 215
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PS+L+ADF+ L + I + +AGA +H D+MDG FVPNISFG + + LR+ S V
Sbjct: 1 MYIAPSMLSADFNNLAQSIRMVEEAGADYLHIDIMDGDFVPNISFGPMLYQGLRAQSKLV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+++ + +++ + AG D++T H E++PHI R+L+ I A G K GV INP T VA
Sbjct: 61 FDVHMMVTNPERYVDQVVKAGADVVTVHVEATPHIHRALQLIKAAGAKAGVVINPGTSVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+E V+ ++D +L+MTVNPGFGGQ I +T+ K+RQ L K S +EVDGGV +
Sbjct: 121 AIEAVLGQVDQVLVMTVNPGFGGQAFIPATLDKVRQLADLRQKQGYSYLIEVDGGVNDKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+LV GS F + + L DL
Sbjct: 181 AADCLAAGADILVAGSYVFGHSDPVQAIQTLKDLA 215
>gi|261254107|ref|ZP_05946680.1| ribulose-phosphate 3-epimerase [Vibrio orientalis CIP 102891]
gi|260937498|gb|EEX93487.1| ribulose-phosphate 3-epimerase [Vibrio orientalis CIP 102891]
Length = 223
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/225 (44%), Positives = 145/225 (64%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+AD +RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADMARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE ++D++DMIL+M+VNPGFGGQ I +T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLSHLEYIMDKVDMILLMSVNPGFGGQSFIPNTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NIK + +AGAD+ V GS+ FNQ Y + ++ ++ +
Sbjct: 181 KVDNIKEIAEAGADMFVAGSAIFNQPD---YKQVIDQMRAELAKV 222
>gi|152985747|ref|YP_001346146.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PA7]
gi|150960905|gb|ABR82930.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa PA7]
Length = 224
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 145/223 (65%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVSAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
V +NI+ + AGAD V GS+ FN + ++ +L ++
Sbjct: 180 VNVKNIREIAAAGADTFVAGSAIFNAPDYAEVIRAMHAELAQA 222
>gi|30995386|ref|NP_438723.2| ribulose-phosphate 3-epimerase [Haemophilus influenzae Rd KW20]
gi|1169388|sp|P44756|RPE_HAEIN RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
Length = 224
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/225 (44%), Positives = 142/225 (63%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
P++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 AMPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS+ F + ++ S A
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKQVIDQIRTQLASVSA 224
>gi|89068142|ref|ZP_01155559.1| Pentose-5-phosphate-3-epimerase [Oceanicola granulosus HTCC2516]
gi|89046381|gb|EAR52438.1| Pentose-5-phosphate-3-epimerase [Oceanicola granulosus HTCC2516]
Length = 226
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 142/222 (63%), Gaps = 3/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSILAADF+ G E+ + GA IH DVMDG FVPN++FG ++++LR +
Sbjct: 3 ERRVAIAPSILAADFADFGREVRAVEDQGADMIHVDVMDGHFVPNLTFGPQMVKALRPHV 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLMI+ +D +I+ A+AG DI++ H E+ PHI R+L+ I G K G+A+NP T
Sbjct: 63 KTVMDVHLMIAPVDPYIDAYAEAGADILSAHYEAGPHIHRTLQAIRGHGMKAGLALNPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV + V+D D +L+MTVNPGFGGQ +ES + +IR+ +A+IG R I++ +DGGV +R
Sbjct: 123 PVEVAGPVLDLCDTVLVMTVNPGFGGQSFLESQLEQIRRLRAMIGDRPITIGIDGGVDTR 182
Query: 182 NIKSLVQAGADLLVVGSSFFN---QKGEISYAKRLNDLKKSA 220
AG D+LV GS+ F Y + + L+++A
Sbjct: 183 TAPLAAAAGGDMLVAGSAIFKHGSADDPAPYGEAITALREAA 224
>gi|83954650|ref|ZP_00963361.1| Pentose-5-phosphate-3-epimerase [Sulfitobacter sp. NAS-14.1]
gi|83840934|gb|EAP80105.1| Pentose-5-phosphate-3-epimerase [Sulfitobacter sp. NAS-14.1]
Length = 229
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 104/228 (45%), Positives = 141/228 (61%), Gaps = 6/228 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT SI+I PSILAADF+ G E I GA +H DVMDG FVPNISFG ++R
Sbjct: 1 MTFDRSIKIAPSILAADFANFGAECEAIEAQGADWVHVDVMDGHFVPNISFGPTTCAAIR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ V D HLMI +D +I+ A AG D+IT H E+ PHI R+L+ I G K GVA+N
Sbjct: 61 PHIKGVMDVHLMIEPVDPYIDAFAKAGADVITAHVEAGPHIHRTLQAIRGAGAKAGVALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TP A +E ++D D++ +MTVNPGFGGQ+ I+ + KIR +A+IG R + +E+DGGV
Sbjct: 121 PGTPAAAVEHLLDVADLVCVMTVNPGFGGQKFIDMS-DKIRTLRAMIGDRPVHIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
S+ QAGAD+LV GS+ F Y + + ++ +A +
Sbjct: 180 DVNTASSVAQAGADVLVAGSAVFRGGSVSNPSPYGENIRAIRAAAEGV 227
>gi|257414256|ref|ZP_05591959.1| ribulose-phosphate 3-epimerase [Roseburia intestinalis L1-82]
gi|257200639|gb|EEU98923.1| ribulose-phosphate 3-epimerase [Roseburia intestinalis L1-82]
gi|291541048|emb|CBL14159.1| ribulose-phosphate 3-epimerase [Roseburia intestinalis XB6B4]
Length = 225
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/214 (46%), Positives = 150/214 (70%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFSRLGE+I + +AGA+ +H DVMDG FVP+ISFG VIR++R+ +D +FD
Sbjct: 12 LSPSILSADFSRLGEQIKELDEAGAQYVHIDVMDGMFVPSISFGMPVIRAIRACTDRIFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I+ A+AG D+IT H ES H+ R++ I G GVAINP TPV+ +
Sbjct: 72 VHLMIEEPGRYIDEFAEAGADLITVHAESCRHLDRTIEKIKEKGLLAGVAINPATPVSAI 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
V++++DM+L+MTVNPGFGGQ+LI T+ K+R+ + ++ ++ + +EVDGGV N++
Sbjct: 132 SCVLEKVDMVLVMTVNPGFGGQKLIPYTVEKVRELRKIVDEKGLKTDIEVDGGVNLSNVE 191
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L+ AGA+++V GS+ F+ + + LN + +
Sbjct: 192 ELMDAGANIIVAGSAIFSGDVTENTIRFLNIINE 225
>gi|298242782|ref|ZP_06966589.1| ribulose-phosphate 3-epimerase [Ktedonobacter racemifer DSM 44963]
gi|297555836|gb|EFH89700.1| ribulose-phosphate 3-epimerase [Ktedonobacter racemifer DSM 44963]
Length = 222
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 150/220 (68%), Gaps = 4/220 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++IVPSIL+ADF+RLGE++ + GA +I DVMDG FVPNI+ G V+ ++R +
Sbjct: 2 VEIVPSILSADFTRLGEQVRDAETGGAGRIQIDVMDGHFVPNITMGPLVVEAVRRSTRLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLMI++ +I A AG D+I H E PH+ R ++ + A G++ GVA+NP TPV
Sbjct: 62 LEAHLMITNPQEYIQTFAQAGADVIIVHQEVCPHLHRVIQQVKATGRRVGVALNPSTPVF 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+DV+ +DM+LIMTVNPGFGGQ I T+PKI + + ++ +R++ +EVDGG++ +
Sbjct: 122 LLKDVLSLLDMVLIMTVNPGFGGQDFIPETLPKIVELRRMLAERNLSCDIEVDGGISEKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
S+V+AGA+LLV GSS +NQ + + + L+++A +
Sbjct: 182 AASVVKAGANLLVAGSSVYNQ--RETVKQAIERLQRAATS 219
>gi|149921432|ref|ZP_01909885.1| ribulose-phosphate 3-epimerase [Plesiocystis pacifica SIR-1]
gi|149817752|gb|EDM77217.1| ribulose-phosphate 3-epimerase [Plesiocystis pacifica SIR-1]
Length = 230
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 138/222 (62%), Gaps = 9/222 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLG+E+ I + GA IH DVMDG FVPN++ G V+++LR + D
Sbjct: 4 IAPSILSADFARLGDEVRAIDEGGADWIHVDVMDGRFVPNLTIGPMVVKALRPVTAKFMD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK------TGVAINPE 120
CHLMI + ++ A AG D IT H E+ PH+ R+L+ IHA+ GV++NP
Sbjct: 64 CHLMIVEPEKYVAEFASAGADGITVHAEACPHLHRNLQQIHALPHHGGERVRAGVSLNPH 123
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV ++ V++ D++LIM+VNPGFGGQ+ I++ PKIR + I R + ++VDGGV
Sbjct: 124 TPVDVVMHVLELCDLVLIMSVNPGFGGQKFIDAVRPKIRTLREAITARGLSTRIQVDGGV 183
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKS 219
T NI L GAD+ V GS+ F K YA + L+ +
Sbjct: 184 TQDNIGELAGDGADVFVAGSAVFRSKYHPGDYAGAIAGLRSA 225
>gi|169634258|ref|YP_001707994.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii SDF]
gi|169153050|emb|CAP02113.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii]
Length = 228
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 148/227 (65%), Gaps = 3/227 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++L++Y
Sbjct: 1 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG DIITFHPE+S HI RSL+ I + G K G+ NP
Sbjct: 61 GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K+R+A+ +I R I LEVDGG
Sbjct: 121 ATPLHYLDHVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI+ + +AGAD+ V GS+ F Q ++ ++D
Sbjct: 181 VGPANIREIAEAGADMFVAGSAIFGQPDYKVMIDQMRAELAKVGSVD 227
>gi|77463344|ref|YP_352848.1| ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides 2.4.1]
gi|77387762|gb|ABA78947.1| ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides 2.4.1]
Length = 236
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 92/201 (45%), Positives = 129/201 (64%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R +
Sbjct: 5 RRIKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G+K G+A+NP T
Sbjct: 65 GVMDVHLMIAPVDPYIEAFAAAGADVITAHLEAGPHIHRTLQAIRGTGRKAGLALNPGTG 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + ++D +D++ IMTVNPGFGGQ+ I S + K+R +A+IG R I +E+DGGVT
Sbjct: 125 LDAVGHLLDLLDLVCIMTVNPGFGGQKFIASQVDKVRDLRAMIGDRPIHIEIDGGVTPET 184
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ AGAD+LV GS+ F
Sbjct: 185 APLVAAAGADVLVAGSAVFKG 205
>gi|319775513|ref|YP_004138001.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae F3047]
gi|319897918|ref|YP_004136115.1| d-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae F3031]
gi|329122445|ref|ZP_08251032.1| ribulose-phosphate 3-epimerase [Haemophilus aegyptius ATCC 11116]
gi|317433424|emb|CBY81805.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae F3031]
gi|317450104|emb|CBY86318.1| D-ribulose-5-phosphate 3-epimerase [Haemophilus influenzae F3047]
gi|327473727|gb|EGF19146.1| ribulose-phosphate 3-epimerase [Haemophilus aegyptius ATCC 11116]
Length = 224
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 146/220 (66%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG+ V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGSAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI + AGAD+ V GS+ F + Y + ++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPD---YKQVIDQMR 216
>gi|291166477|gb|EFE28523.1| ribulose-phosphate 3-epimerase [Filifactor alocis ATCC 35896]
Length = 219
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 138/218 (63%), Gaps = 2/218 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADFS+L E + + AG + +H DVMDG FVPNI+FGA V LR S+
Sbjct: 2 IKLAPSILSADFSQLAESVKAVENAGCEYLHIDVMDGHFVPNITFGAVVFEKLRKKSNMT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLMI D ++ AG DIIT H E+ H+ R++ I +G K GVAINP T
Sbjct: 62 FDCHLMIEQPDLYLEDFVKAGADIITVHQEACVHLNRTIHHIKELGCKAGVAINPATSPQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
LE V+ ++DM+LIM+VNPGFGGQ+ I ++ KI++ K +I ++ ++VDGGV+ N
Sbjct: 122 ALEYVLQDVDMVLIMSVNPGFGGQKFIPQSLDKIKKLKQMIDAKNYNVDIQVDGGVSVDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +V AGA+++V GS+ F + L D + +
Sbjct: 182 IHDIVTAGANIVVAGSAIFGKDNIQKAVSNLRDSAEQS 219
>gi|15803889|ref|NP_289925.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 EDL933]
gi|15833482|ref|NP_312255.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
Sakai]
gi|16131264|ref|NP_417845.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|24114649|ref|NP_709159.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2a str. 301]
gi|26249980|ref|NP_756020.1| ribulose-phosphate 3-epimerase [Escherichia coli CFT073]
gi|30065330|ref|NP_839501.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2a str. 2457T]
gi|74313891|ref|YP_312310.1| ribulose-phosphate 3-epimerase [Shigella sonnei Ss046]
gi|82545741|ref|YP_409688.1| ribulose-phosphate 3-epimerase [Shigella boydii Sb227]
gi|89110624|ref|AP_004404.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. W3110]
gi|91212858|ref|YP_542844.1| ribulose-phosphate 3-epimerase [Escherichia coli UTI89]
gi|110643620|ref|YP_671350.1| ribulose-phosphate 3-epimerase [Escherichia coli 536]
gi|110807218|ref|YP_690738.1| ribulose-phosphate 3-epimerase [Shigella flexneri 5 str. 8401]
gi|117625654|ref|YP_858977.1| ribulose-phosphate 3-epimerase [Escherichia coli APEC O1]
gi|157155929|ref|YP_001464840.1| ribulose-phosphate 3-epimerase [Escherichia coli E24377A]
gi|157162862|ref|YP_001460180.1| ribulose-phosphate 3-epimerase [Escherichia coli HS]
gi|168751803|ref|ZP_02776825.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4113]
gi|168753135|ref|ZP_02778142.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4401]
gi|168759407|ref|ZP_02784414.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4501]
gi|168765730|ref|ZP_02790737.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4486]
gi|168772726|ref|ZP_02797733.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4196]
gi|168779466|ref|ZP_02804473.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4076]
gi|168785187|ref|ZP_02810194.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC869]
gi|168797153|ref|ZP_02822160.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC508]
gi|170018378|ref|YP_001723332.1| ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|170082903|ref|YP_001732223.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|170680384|ref|YP_001745629.1| ribulose-phosphate 3-epimerase [Escherichia coli SMS-3-5]
gi|187730135|ref|YP_001882061.1| ribulose-phosphate 3-epimerase [Shigella boydii CDC 3083-94]
gi|188493881|ref|ZP_03001151.1| ribulose-phosphate 3-epimerase [Escherichia coli 53638]
gi|191167882|ref|ZP_03029686.1| ribulose-phosphate 3-epimerase [Escherichia coli B7A]
gi|191171526|ref|ZP_03033074.1| ribulose-phosphate 3-epimerase [Escherichia coli F11]
gi|193061664|ref|ZP_03042761.1| ribulose-phosphate 3-epimerase [Escherichia coli E22]
gi|193068854|ref|ZP_03049814.1| ribulose-phosphate 3-epimerase [Escherichia coli E110019]
gi|194427003|ref|ZP_03059555.1| ribulose-phosphate 3-epimerase [Escherichia coli B171]
gi|194439475|ref|ZP_03071550.1| ribulose-phosphate 3-epimerase [Escherichia coli 101-1]
gi|195934874|ref|ZP_03080256.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4024]
gi|208807259|ref|ZP_03249596.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4206]
gi|208813861|ref|ZP_03255190.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4045]
gi|208820658|ref|ZP_03260978.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4042]
gi|209397258|ref|YP_002272820.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4115]
gi|209920838|ref|YP_002294922.1| ribulose-phosphate 3-epimerase [Escherichia coli SE11]
gi|215488667|ref|YP_002331098.1| ribulose-phosphate 3-epimerase [Escherichia coli O127:H6 str.
E2348/69]
gi|217326586|ref|ZP_03442670.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
TW14588]
gi|218555931|ref|YP_002388844.1| ribulose-phosphate 3-epimerase [Escherichia coli IAI1]
gi|218560443|ref|YP_002393356.1| ribulose-phosphate 3-epimerase [Escherichia coli S88]
gi|218691662|ref|YP_002399874.1| ribulose-phosphate 3-epimerase [Escherichia coli ED1a]
gi|218697066|ref|YP_002404733.1| ribulose-phosphate 3-epimerase [Escherichia coli 55989]
gi|218702129|ref|YP_002409758.1| ribulose-phosphate 3-epimerase [Escherichia coli IAI39]
gi|218706976|ref|YP_002414495.1| ribulose-phosphate 3-epimerase [Escherichia coli UMN026]
gi|227883516|ref|ZP_04001321.1| ribulose-phosphate 3-epimerase [Escherichia coli 83972]
gi|237703113|ref|ZP_04533594.1| ribulose-phosphate 3-epimerase [Escherichia sp. 3_2_53FAA]
gi|238902477|ref|YP_002928273.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli BW2952]
gi|253771787|ref|YP_003034618.1| ribulose-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038550|ref|ZP_04872606.1| ribulose-phosphate 3-epimerase [Escherichia sp. 1_1_43]
gi|254163314|ref|YP_003046422.1| ribulose-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|254795300|ref|YP_003080137.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
TW14359]
gi|256020730|ref|ZP_05434595.1| ribulose-phosphate 3-epimerase [Shigella sp. D9]
gi|256025887|ref|ZP_05439752.1| ribulose-phosphate 3-epimerase [Escherichia sp. 4_1_40B]
gi|260846170|ref|YP_003223948.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O103:H2 str.
12009]
gi|260857493|ref|YP_003231384.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O26:H11 str.
11368]
gi|260870112|ref|YP_003236514.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O111:H- str.
11128]
gi|261224668|ref|ZP_05938949.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254437|ref|ZP_05946970.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
FRIK966]
gi|291284722|ref|YP_003501540.1| Ribulose-phosphate 3-epimerase [Escherichia coli O55:H7 str.
CB9615]
gi|293406964|ref|ZP_06650888.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1412]
gi|293412802|ref|ZP_06655470.1| ribulose-phosphate 3-epimerase [Escherichia coli B354]
gi|293416786|ref|ZP_06659423.1| ribulose-phosphate 3-epimerase [Escherichia coli B185]
gi|293453693|ref|ZP_06664112.1| ribulose-phosphate 3-epimerase [Escherichia coli B088]
gi|297519193|ref|ZP_06937579.1| ribulose-phosphate 3-epimerase [Escherichia coli OP50]
gi|298382706|ref|ZP_06992301.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1302]
gi|300815420|ref|ZP_07095645.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 107-1]
gi|300822822|ref|ZP_07102958.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 119-7]
gi|300896542|ref|ZP_07115064.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 198-1]
gi|300907476|ref|ZP_07125120.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 84-1]
gi|300919337|ref|ZP_07135848.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 115-1]
gi|300926932|ref|ZP_07142695.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 182-1]
gi|300931087|ref|ZP_07146440.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 187-1]
gi|300937323|ref|ZP_07152163.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
gi|300946875|ref|ZP_07161115.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300956709|ref|ZP_07168981.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 175-1]
gi|300974832|ref|ZP_07172740.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 45-1]
gi|300987076|ref|ZP_07177985.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 200-1]
gi|301019631|ref|ZP_07183789.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 69-1]
gi|301023159|ref|ZP_07186961.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|301050412|ref|ZP_07197298.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 185-1]
gi|301302261|ref|ZP_07208393.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 124-1]
gi|301329682|ref|ZP_07222435.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 78-1]
gi|301645821|ref|ZP_07245737.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 146-1]
gi|306816276|ref|ZP_07450414.1| ribulose-phosphate 3-epimerase [Escherichia coli NC101]
gi|307311952|ref|ZP_07591590.1| ribulose-phosphate 3-epimerase [Escherichia coli W]
gi|309794650|ref|ZP_07689072.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 145-7]
gi|312968308|ref|ZP_07782518.1| ribulose-phosphate 3-epimerase [Escherichia coli 2362-75]
gi|312972351|ref|ZP_07786525.1| ribulose-phosphate 3-epimerase [Escherichia coli 1827-70]
gi|331649182|ref|ZP_08350268.1| ribulose-phosphate 3-epimerase [Escherichia coli M605]
gi|331654962|ref|ZP_08355961.1| ribulose-phosphate 3-epimerase [Escherichia coli M718]
gi|331659674|ref|ZP_08360612.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
gi|331664988|ref|ZP_08365889.1| ribulose-phosphate 3-epimerase [Escherichia coli TA143]
gi|331670204|ref|ZP_08371043.1| ribulose-phosphate 3-epimerase [Escherichia coli TA271]
gi|331674878|ref|ZP_08375635.1| ribulose-phosphate 3-epimerase [Escherichia coli TA280]
gi|331679446|ref|ZP_08380116.1| ribulose-phosphate 3-epimerase [Escherichia coli H591]
gi|331685024|ref|ZP_08385610.1| ribulose-phosphate 3-epimerase [Escherichia coli H299]
gi|332281930|ref|ZP_08394343.1| ribulose-phosphate 3-epimerase [Shigella sp. D9]
gi|84028110|sp|P0AG09|RPE_ECO57 RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|84028150|sp|P0AG08|RPE_ECOL6 RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|84028157|sp|P0AG07|RPE_ECOLI RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|84028158|sp|P0AG10|RPE_SHIFL RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|12518006|gb|AAG58486.1|AE005560_12 D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EDL933]
gi|26110409|gb|AAN82594.1|AE016768_12 Ribulose-phosphate 3-epimerase [Escherichia coli CFT073]
gi|606320|gb|AAA58183.1| 24 kD protein [Escherichia coli str. K-12 substr. MG1655]
gi|1789788|gb|AAC76411.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|13363702|dbj|BAB37651.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
Sakai]
gi|24053853|gb|AAN44866.1| D-ribulose-5-phosphate 3-epimerase [Shigella flexneri 2a str. 301]
gi|30043592|gb|AAP19312.1| D-ribulose-5-phosphate 3-epimerase [Shigella flexneri 2a str.
2457T]
gi|73857368|gb|AAZ90075.1| D-ribulose-5-phosphate 3-epimerase [Shigella sonnei Ss046]
gi|81247152|gb|ABB67860.1| D-ribulose-5-phosphate 3-epimerase [Shigella boydii Sb227]
gi|85676655|dbj|BAE77905.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K12
substr. W3110]
gi|91074432|gb|ABE09313.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli UTI89]
gi|110345212|gb|ABG71449.1| ribulose-phosphate 3-epimerase [Escherichia coli 536]
gi|110616766|gb|ABF05433.1| D-ribulose-5-phosphate 3-epimerase [Shigella flexneri 5 str. 8401]
gi|115514778|gb|ABJ02853.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli APEC O1]
gi|157068542|gb|ABV07797.1| ribulose-phosphate 3-epimerase [Escherichia coli HS]
gi|157077959|gb|ABV17667.1| ribulose-phosphate 3-epimerase [Escherichia coli E24377A]
gi|169753306|gb|ACA76005.1| Ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|169890738|gb|ACB04445.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|170518102|gb|ACB16280.1| ribulose-phosphate 3-epimerase [Escherichia coli SMS-3-5]
gi|187427127|gb|ACD06401.1| ribulose-phosphate 3-epimerase [Shigella boydii CDC 3083-94]
gi|187771378|gb|EDU35222.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4196]
gi|188014200|gb|EDU52322.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4113]
gi|188489080|gb|EDU64183.1| ribulose-phosphate 3-epimerase [Escherichia coli 53638]
gi|189002650|gb|EDU71636.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4076]
gi|189359178|gb|EDU77597.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4401]
gi|189364543|gb|EDU82962.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4486]
gi|189369699|gb|EDU88115.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4501]
gi|189374480|gb|EDU92896.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC869]
gi|189380033|gb|EDU98449.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC508]
gi|190902055|gb|EDV61800.1| ribulose-phosphate 3-epimerase [Escherichia coli B7A]
gi|190908153|gb|EDV67744.1| ribulose-phosphate 3-epimerase [Escherichia coli F11]
gi|192932454|gb|EDV85051.1| ribulose-phosphate 3-epimerase [Escherichia coli E22]
gi|192957930|gb|EDV88373.1| ribulose-phosphate 3-epimerase [Escherichia coli E110019]
gi|194414964|gb|EDX31234.1| ribulose-phosphate 3-epimerase [Escherichia coli B171]
gi|194421561|gb|EDX37573.1| ribulose-phosphate 3-epimerase [Escherichia coli 101-1]
gi|208727060|gb|EDZ76661.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4206]
gi|208735138|gb|EDZ83825.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4045]
gi|208740781|gb|EDZ88463.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4042]
gi|209158658|gb|ACI36091.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC4115]
gi|209756678|gb|ACI76651.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209756680|gb|ACI76652.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209756682|gb|ACI76653.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209756684|gb|ACI76654.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209756686|gb|ACI76655.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli]
gi|209914097|dbj|BAG79171.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli SE11]
gi|215266739|emb|CAS11178.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O127:H6 str.
E2348/69]
gi|217322807|gb|EEC31231.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
TW14588]
gi|218353798|emb|CAV00133.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli 55989]
gi|218362699|emb|CAR00325.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli IAI1]
gi|218367212|emb|CAR04986.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli S88]
gi|218372115|emb|CAR19977.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli IAI39]
gi|218429226|emb|CAR10036.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli ED1a]
gi|218434073|emb|CAR14990.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli UMN026]
gi|222035088|emb|CAP77833.1| ribulose-phosphate 3-epimerase [Escherichia coli LF82]
gi|226839056|gb|EEH71079.1| ribulose-phosphate 3-epimerase [Escherichia sp. 1_1_43]
gi|226902377|gb|EEH88636.1| ribulose-phosphate 3-epimerase [Escherichia sp. 3_2_53FAA]
gi|227839395|gb|EEJ49861.1| ribulose-phosphate 3-epimerase [Escherichia coli 83972]
gi|238861006|gb|ACR63004.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli BW2952]
gi|242378912|emb|CAQ33707.1| ribulose phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|253322831|gb|ACT27433.1| ribulose-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975215|gb|ACT40886.1| ribulose-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|253979371|gb|ACT45041.1| ribulose-phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|254594700|gb|ACT74061.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O157:H7 str.
TW14359]
gi|257756142|dbj|BAI27644.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O26:H11 str.
11368]
gi|257761317|dbj|BAI32814.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O103:H2 str.
12009]
gi|257766468|dbj|BAI37963.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli O111:H- str.
11128]
gi|260447595|gb|ACX38017.1| Ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|281180417|dbj|BAI56747.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli SE15]
gi|281602734|gb|ADA75718.1| D-ribulose-5-phosphate 3-epimerase [Shigella flexneri 2002017]
gi|284923378|emb|CBG36472.1| ribulose-phosphate 3-epimerase [Escherichia coli 042]
gi|290764595|gb|ADD58556.1| Ribulose-phosphate 3-epimerase [Escherichia coli O55:H7 str.
CB9615]
gi|291321819|gb|EFE61250.1| ribulose-phosphate 3-epimerase [Escherichia coli B088]
gi|291425775|gb|EFE98809.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1412]
gi|291431362|gb|EFF04347.1| ribulose-phosphate 3-epimerase [Escherichia coli B185]
gi|291468449|gb|EFF10942.1| ribulose-phosphate 3-epimerase [Escherichia coli B354]
gi|294491368|gb|ADE90124.1| ribulose-phosphate 3-epimerase [Escherichia coli IHE3034]
gi|298276542|gb|EFI18060.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1302]
gi|299880945|gb|EFI89156.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|300297880|gb|EFJ54265.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 185-1]
gi|300306291|gb|EFJ60811.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 200-1]
gi|300316493|gb|EFJ66277.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 175-1]
gi|300359615|gb|EFJ75485.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 198-1]
gi|300399153|gb|EFJ82691.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 69-1]
gi|300400786|gb|EFJ84324.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 84-1]
gi|300410464|gb|EFJ94002.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 45-1]
gi|300413593|gb|EFJ96903.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 115-1]
gi|300417071|gb|EFK00382.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 182-1]
gi|300453484|gb|EFK17104.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300457606|gb|EFK21099.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
gi|300461070|gb|EFK24563.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 187-1]
gi|300524588|gb|EFK45657.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 119-7]
gi|300532312|gb|EFK53374.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 107-1]
gi|300842424|gb|EFK70184.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 124-1]
gi|300844261|gb|EFK72021.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 78-1]
gi|301075935|gb|EFK90741.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 146-1]
gi|305850672|gb|EFM51129.1| ribulose-phosphate 3-epimerase [Escherichia coli NC101]
gi|306908096|gb|EFN38596.1| ribulose-phosphate 3-epimerase [Escherichia coli W]
gi|307555469|gb|ADN48244.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli ABU 83972]
gi|307628447|gb|ADN72751.1| ribulose-phosphate 3-epimerase [Escherichia coli UM146]
gi|308121700|gb|EFO58962.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 145-7]
gi|309703797|emb|CBJ03138.1| ribulose-phosphate 3-epimerase [Escherichia coli ETEC H10407]
gi|310334728|gb|EFQ00933.1| ribulose-phosphate 3-epimerase [Escherichia coli 1827-70]
gi|312287133|gb|EFR15043.1| ribulose-phosphate 3-epimerase [Escherichia coli 2362-75]
gi|312947934|gb|ADR28761.1| ribulose-phosphate 3-epimerase [Escherichia coli O83:H1 str. NRG
857C]
gi|313647318|gb|EFS11770.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2a str. 2457T]
gi|315062663|gb|ADT76990.1| D-ribulose-5-phosphate 3-epimerase [Escherichia coli W]
gi|315137962|dbj|BAJ45121.1| ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|315255973|gb|EFU35941.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 85-1]
gi|315286002|gb|EFU45440.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 110-3]
gi|315291633|gb|EFU50989.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 153-1]
gi|315295886|gb|EFU55199.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 16-3]
gi|315619005|gb|EFU99588.1| ribulose-phosphate 3-epimerase [Escherichia coli 3431]
gi|320175751|gb|EFW50837.1| Ribulose-phosphate 3-epimerase [Shigella dysenteriae CDC 74-1112]
gi|320186746|gb|EFW61469.1| Ribulose-phosphate 3-epimerase [Shigella flexneri CDC 796-83]
gi|320191604|gb|EFW66254.1| Ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
EC1212]
gi|320199554|gb|EFW74144.1| Ribulose-phosphate 3-epimerase [Escherichia coli EC4100B]
gi|320639668|gb|EFX09262.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
G5101]
gi|320645167|gb|EFX14183.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H- str.
493-89]
gi|320650478|gb|EFX18944.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H- str. H
2687]
gi|320655669|gb|EFX23592.1| ribulose-phosphate 3-epimerase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661454|gb|EFX28869.1| ribulose-phosphate 3-epimerase [Escherichia coli O55:H7 str. USDA
5905]
gi|320666476|gb|EFX33459.1| ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str.
LSU-61]
gi|323154215|gb|EFZ40418.1| ribulose-phosphate 3-epimerase [Escherichia coli EPECa14]
gi|323162770|gb|EFZ48607.1| ribulose-phosphate 3-epimerase [Escherichia coli E128010]
gi|323164944|gb|EFZ50735.1| ribulose-phosphate 3-epimerase [Shigella sonnei 53G]
gi|323174015|gb|EFZ59643.1| ribulose-phosphate 3-epimerase [Escherichia coli LT-68]
gi|323179090|gb|EFZ64664.1| ribulose-phosphate 3-epimerase [Escherichia coli 1180]
gi|323182845|gb|EFZ68246.1| ribulose-phosphate 3-epimerase [Escherichia coli 1357]
gi|323189029|gb|EFZ74313.1| ribulose-phosphate 3-epimerase [Escherichia coli RN587/1]
gi|323376749|gb|ADX49017.1| ribulose-phosphate 3-epimerase [Escherichia coli KO11]
gi|323934624|gb|EGB31024.1| ribulose-phosphate 3-epimerase [Escherichia coli E1520]
gi|323939395|gb|EGB35606.1| ribulose-phosphate 3-epimerase [Escherichia coli E482]
gi|323944392|gb|EGB40467.1| ribulose-phosphate 3-epimerase [Escherichia coli H120]
gi|323950043|gb|EGB45926.1| ribulose-phosphate 3-epimerase [Escherichia coli H252]
gi|323954677|gb|EGB50459.1| ribulose-phosphate 3-epimerase [Escherichia coli H263]
gi|323959614|gb|EGB55266.1| ribulose-phosphate 3-epimerase [Escherichia coli H489]
gi|323966196|gb|EGB61632.1| ribulose-phosphate 3-epimerase [Escherichia coli M863]
gi|323969984|gb|EGB65259.1| ribulose-phosphate 3-epimerase [Escherichia coli TA007]
gi|323974813|gb|EGB69925.1| ribulose-phosphate 3-epimerase [Escherichia coli TW10509]
gi|324009439|gb|EGB78658.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 57-2]
gi|324014637|gb|EGB83856.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 60-1]
gi|324018735|gb|EGB87954.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 117-3]
gi|324111696|gb|EGC05676.1| ribulose-phosphate 3-epimerase [Escherichia fergusonii B253]
gi|324116421|gb|EGC10340.1| ribulose-phosphate 3-epimerase [Escherichia coli E1167]
gi|325498927|gb|EGC96786.1| ribulose-phosphate 3-epimerase [Escherichia fergusonii ECD227]
gi|326337653|gb|EGD61488.1| Ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str. 1044]
gi|326344596|gb|EGD68345.1| Ribulose-phosphate 3-epimerase [Escherichia coli O157:H7 str. 1125]
gi|327251015|gb|EGE62708.1| ribulose-phosphate 3-epimerase [Escherichia coli STEC_7v]
gi|330909419|gb|EGH37933.1| ribulose-phosphate 3-epimerase [Escherichia coli AA86]
gi|331041680|gb|EGI13824.1| ribulose-phosphate 3-epimerase [Escherichia coli M605]
gi|331046977|gb|EGI19055.1| ribulose-phosphate 3-epimerase [Escherichia coli M718]
gi|331052889|gb|EGI24922.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
gi|331057498|gb|EGI29484.1| ribulose-phosphate 3-epimerase [Escherichia coli TA143]
gi|331062266|gb|EGI34186.1| ribulose-phosphate 3-epimerase [Escherichia coli TA271]
gi|331067787|gb|EGI39185.1| ribulose-phosphate 3-epimerase [Escherichia coli TA280]
gi|331072618|gb|EGI43943.1| ribulose-phosphate 3-epimerase [Escherichia coli H591]
gi|331077395|gb|EGI48607.1| ribulose-phosphate 3-epimerase [Escherichia coli H299]
gi|332090443|gb|EGI95541.1| ribulose-phosphate 3-epimerase [Shigella boydii 3594-74]
gi|332104282|gb|EGJ07628.1| ribulose-phosphate 3-epimerase [Shigella sp. D9]
gi|332345337|gb|AEE58671.1| ribulose-phosphate 3-epimerase [Escherichia coli UMNK88]
gi|332750369|gb|EGJ80780.1| ribulose-phosphate 3-epimerase [Shigella flexneri 4343-70]
gi|332750884|gb|EGJ81291.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2747-71]
gi|332763632|gb|EGJ93871.1| ribulose-phosphate 3-epimerase [Shigella flexneri 2930-71]
gi|332996427|gb|EGK16054.1| ribulose-phosphate 3-epimerase [Shigella flexneri VA-6]
gi|333012402|gb|EGK31783.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-304]
gi|333013077|gb|EGK32453.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-227]
Length = 225
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|258511310|ref|YP_003184744.1| ribulose-phosphate 3-epimerase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478036|gb|ACV58355.1| ribulose-phosphate 3-epimerase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 217
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 86/217 (39%), Positives = 140/217 (64%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL++DF+RL +E+ + +AG IH DVMDG FVPN++ G ++++LR + + F
Sbjct: 1 MIAPSILSSDFARLRDEVDEVIRAGCDWIHIDVMDGHFVPNLTLGPPIVKALRRHVQATF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ S + I DAG DI+T H E++PH+ R+L+ I GK+ G+A+NP T
Sbjct: 61 DVHLMVESPEHWIPAFVDAGADILTVHYEATPHVHRALQMIRESGKRAGLALNPGTSPDG 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTSRN 182
L ++ ++D++L+MTVNPGFGGQ L+ ST+ K+ + + ++ + + + +EVDGG+ +
Sbjct: 121 LSYLLADVDLVLVMTVNPGFGGQSLVPSTLAKVAEVRRMLDEAGRQDVHVEVDGGIHAGT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKK 218
I+ AGAD+ V GS+ F++ + L L++
Sbjct: 181 IRQARDAGADVFVAGSAVFDEPDRALAIESLRAALRE 217
>gi|254429468|ref|ZP_05043175.1| ribulose-phosphate 3-epimerase [Alcanivorax sp. DG881]
gi|196195637|gb|EDX90596.1| ribulose-phosphate 3-epimerase [Alcanivorax sp. DG881]
Length = 224
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSILAA+F+RLGEE + AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 8 IAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I++ A+AG ITFHPE+S H+ RSL+ I + G K G+ +NP T
Sbjct: 68 DVHLMVSPVDDLISMFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLNPATRPDC 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D++DMIL+M+VNPG+GGQ+ I ST+ K R + LI R I LEVDGGV+ +NI
Sbjct: 128 LEYVMDKLDMILLMSVNPGYGGQKFIPSTLDKTRAVRQLIDASGRDIRLEVDGGVSEKNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + AGAD V GS+ F + + +++ D
Sbjct: 188 REVAAAGADTFVAGSAIFGKDDYAAVIQQMRD 219
>gi|297198308|ref|ZP_06915705.1| ribulose-phosphate 3-epimerase [Streptomyces sviceus ATCC 29083]
gi|197715561|gb|EDY59595.1| ribulose-phosphate 3-epimerase [Streptomyces sviceus ATCC 29083]
Length = 228
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 90/221 (40%), Positives = 130/221 (58%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGASSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ AGAD+ V GS+ + + L + + A A
Sbjct: 180 TIERCADAGADVFVAGSAVYGASDPAEAVRALRNQAEGATA 220
>gi|198276887|ref|ZP_03209418.1| hypothetical protein BACPLE_03092 [Bacteroides plebeius DSM 17135]
gi|198270412|gb|EDY94682.1| hypothetical protein BACPLE_03092 [Bacteroides plebeius DSM 17135]
Length = 218
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PS+L+A+F+ L ++ I ++ A +H D+MDG FVPNISFG V++ + S
Sbjct: 3 KIMVAPSLLSANFADLKSDLEKINQSEADWLHLDIMDGVFVPNISFGFPVLKYVAEISQK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + I + + G ++ H E+ PH+ R ++ I G K GV +NP TPV
Sbjct: 63 PLDVHLMIVQPEKFIREVKNLGAMMMNVHYEACPHLHRVIQQIKEAGMKAGVTLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LED+I E+DM+L+M+VNPGFGGQ+ I +T KI Q + +I + S +EVDGGV
Sbjct: 123 SVLEDIITEVDMVLLMSVNPGFGGQKFIPNTFKKIAQLREMITRNGASALIEVDGGVNQE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N L +AGAD+LV GSS FN I ++L
Sbjct: 183 NAPLLRRAGADVLVAGSSVFNSPDMIKAIQQLK 215
>gi|221070088|ref|ZP_03546193.1| Ribulose-phosphate 3-epimerase [Comamonas testosteroni KF-1]
gi|220715111|gb|EED70479.1| Ribulose-phosphate 3-epimerase [Comamonas testosteroni KF-1]
Length = 226
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 148/227 (65%), Gaps = 11/227 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + ++L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPH 60
Query: 61 S------DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S D HLM+ +D A AG D I+FHP++S H+ RS++ I + G K G
Sbjct: 61 SVTLDGKPVPIDVHLMVQPVDDLATAFAKAGADYISFHPDASQHVHRSIQNIKSHGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP TP+ +L+ VI++ID+IL+M+VNPGFGGQ I+ST+ K+ A+ I + I L
Sbjct: 121 LVFNPATPLDVLDWVIEDIDLILLMSVNPGFGGQSFIDSTLRKVEAARKRIEASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
EVDGG+ NI+++ AGAD V GS+ F + Y ++ ++K+
Sbjct: 181 EVDGGIKEANIRAVADAGADTFVAGSAIFGKPD---YKAVIDTMRKN 224
>gi|330505247|ref|YP_004382116.1| ribulose-phosphate 3-epimerase [Pseudomonas mendocina NK-01]
gi|328919533|gb|AEB60364.1| ribulose-phosphate 3-epimerase [Pseudomonas mendocina NK-01]
Length = 224
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 106/218 (48%), Positives = 143/218 (65%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG ITFHPE+S HI RSL+ I A G K G+ NP
Sbjct: 60 GITAPIDAHLMVKPVDRIIGDFIEAGASYITFHPEASEHIDRSLQLIKAGGAKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMILLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V +NI+ + +AGAD V GS+ FNQ + +
Sbjct: 180 VNVQNIREIAEAGADTFVAGSAIFNQPDYKAVIDAMRA 217
>gi|283787979|ref|YP_003367844.1| ribulose-phosphate 3-epimerase [Citrobacter rodentium ICC168]
gi|282951433|emb|CBG91132.1| ribulose-phosphate 3-epimerase [Citrobacter rodentium ICC168]
Length = 225
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS-VF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRKYGIAAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G + G+ NP TP++
Sbjct: 66 DVHLMVEPVDRIVPDFAAAGASIITFHPEASGHVDRTLQLIKEHGCQAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLNKLREVRRRIDESGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|303248515|ref|ZP_07334773.1| ribulose-phosphate 3-epimerase [Desulfovibrio fructosovorans JJ]
gi|302490135|gb|EFL50055.1| ribulose-phosphate 3-epimerase [Desulfovibrio fructosovorans JJ]
Length = 224
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 89/224 (39%), Positives = 141/224 (62%), Gaps = 5/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + PS+L++DF RL +E++ + AG + +H DVMDG FVPNI+FG +I ++R
Sbjct: 1 MPAPFILSPSLLSSDFGRLADELAALEGAGLRWVHLDVMDGLFVPNITFGPPIIAAMRRR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMI + ++ +AG D+I H E++ H+ R++ I +G GVA+NP
Sbjct: 61 SKLYFDTHLMIERPERYLAAFREAGSDLICVHAEATVHLERAVSEIRRLGAAPGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TP++ +E ++ +++M+L+MTVNPGFGGQ I + K++ A+ +R + ++VDGGV
Sbjct: 121 TPLSQVEYLLPQLEMVLVMTVNPGFGGQSFIPFCLDKVKDLAAMRRERDLSFRIQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ N +LV AGAD+LV GS+FF Y +RL+ + +A
Sbjct: 181 SPDNTAALVAAGADVLVSGSAFFGHP---PYKERLDVFQAAAAT 221
>gi|146309013|ref|YP_001189478.1| ribulose-phosphate 3-epimerase [Pseudomonas mendocina ymp]
gi|145577214|gb|ABP86746.1| ribulose-5-phosphate 3-epimerase [Pseudomonas mendocina ymp]
Length = 224
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 106/218 (48%), Positives = 143/218 (65%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCAALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I +AG ITFHPE+S HI RSL+ I A G K G+ NP
Sbjct: 60 GITAPIDAHLMVKPVDRIIGDFIEAGASYITFHPEASEHIDRSLQLIKAGGAKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATPLDVLKYVMDKVDMILLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V +NI+ + +AGAD V GS+ FNQ + +
Sbjct: 180 VNVQNIREIAEAGADTFVAGSAIFNQPDYKAVIDAMRA 217
>gi|29833422|ref|NP_828056.1| ribulose-phosphate 3-epimerase [Streptomyces avermitilis MA-4680]
gi|29610545|dbj|BAC74591.1| putative ribulose-phosphate 3-epimerase [Streptomyces avermitilis
MA-4680]
Length = 228
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 89/222 (40%), Positives = 131/222 (59%), Gaps = 4/222 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 2 AVQINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPIVEALARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEDADRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD+ V GS+ + + L + A A+
Sbjct: 180 TIERCAEAGADVFVAGSAVYGAADPADAVRALRTQAEGATAL 221
>gi|148545701|ref|YP_001265803.1| ribulose-phosphate 3-epimerase [Pseudomonas putida F1]
gi|167031462|ref|YP_001666693.1| ribulose-phosphate 3-epimerase [Pseudomonas putida GB-1]
gi|148509759|gb|ABQ76619.1| ribulose-5-phosphate 3-epimerase [Pseudomonas putida F1]
gi|166857950|gb|ABY96357.1| Ribulose-phosphate 3-epimerase [Pseudomonas putida GB-1]
gi|313496781|gb|ADR58147.1| Rpe [Pseudomonas putida BIRD-1]
Length = 224
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 141/225 (62%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPYA-IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCTALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIKDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ V+D+IDM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATSLDALKYVMDKIDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN ++ + ALA
Sbjct: 180 VNVNNIREIAAAGADTFVAGSAIFNAPDYQEVIAKMR--AELALA 222
>gi|295698877|ref|YP_003606770.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1002]
gi|295438090|gb|ADG17259.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1002]
Length = 235
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 142/229 (62%), Gaps = 9/229 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+ADF+RL +EI ++T AGA IH DVMD +VPN++ G V ++R Y+
Sbjct: 1 MREFLIAPSLLSADFARLADEIRDVTVAGADWIHLDVMDNHYVPNLTVGPLVCSAIRPYT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLM + +D ++ A+AG ++I+FHPE++ H+ R++ I + G + G+A+NP T
Sbjct: 61 SLPFDVHLMTTPVDPLVSAFAEAGANLISFHPEATLHVHRTIELIRSHGARAGLALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG------KRSISLEVD 175
P+ +L+ V++ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVD
Sbjct: 121 PLTVLDHVLEMLDVVLVMSVNPGFGGQAFITETLDKLRLLRERVETTMQRTGRPLLIEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
GGV + NI + AGAD+ V GS+ F A+ + ++ +D
Sbjct: 181 GGVKASNIARVATAGADVFVAGSAVFGASDR---AQAIRGMRGELATVD 226
>gi|298292117|ref|YP_003694056.1| ribulose-phosphate 3-epimerase [Starkeya novella DSM 506]
gi|296928628|gb|ADH89437.1| ribulose-phosphate 3-epimerase [Starkeya novella DSM 506]
Length = 228
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 112/222 (50%), Positives = 152/222 (68%), Gaps = 2/222 (0%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT + I PSILA+DF+R GEE+ + AGA IH DVMDG FVPNISFG DV++++R
Sbjct: 1 MTQRPLIISPSILASDFARFGEEVRAVDAAGADWIHIDVMDGHFVPNISFGPDVVKAIRP 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S FD HLMI+ +D ++ A AG D I+ H E+ PH+ RSL+ I A+GKK GVAINP
Sbjct: 61 LSSKPFDVHLMIAPVDPYLEAFAKAGADHISVHAEAGPHLHRSLQAIRALGKKAGVAINP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP +++E+V+D ID+I++MTVNPGFGGQ I + K+RQ AL+G R I +E+DGGVT
Sbjct: 121 ATPASMIENVLDLIDVIIVMTVNPGFGGQAFIAPVMDKVRQISALVGDRPIDIEIDGGVT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ + AGA+ LV GS+ F G +YA + ++ +AL
Sbjct: 181 HDTAPACMLAGANALVAGSAVFKG-GASAYAGNIKAIRDAAL 221
>gi|187934394|ref|YP_001885421.1| ribulose-phosphate 3-epimerase [Clostridium botulinum B str. Eklund
17B]
gi|187722547|gb|ACD23768.1| ribulose-phosphate 3-epimerase [Clostridium botulinum B str. Eklund
17B]
Length = 214
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE++ I KAGA+ IH DVMDG FVPNISFG +I+S+R+ ++ +
Sbjct: 2 VKIAPSILSADFSKLGEDVERIDKAGAEFIHIDVMDGSFVPNISFGFPIIKSIRNRTEKI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I+ +AG D+IT H E+ HI R+++ I + GKK +A+NP TP
Sbjct: 62 FDVHLMIENPSKYIDDFIEAGADLITVHYEADRHIDRTIQYIKSKGKKAAIALNPGTPTM 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+L+D+I ++DM+LIM+VNPGFGGQ+ I ++ KI++ K + S+ ++VDGGV N
Sbjct: 122 VLKDLISQLDMVLIMSVNPGFGGQKFIPYSLEKIKEVKEMSKHLNPSLLIQVDGGVDLSN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +V+AGA+++V GS+ F + L
Sbjct: 182 ISEVVEAGANVIVAGSAVFKGGNIEENIEALR 213
>gi|38638084|ref|NP_943058.1| ribulose-5-phosphate 3-epimerase [Ralstonia eutropha H16]
gi|729236|sp|Q04539|RPEP_RALEH RecName: Full=Ribulose-phosphate 3-epimerase, plasmid; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|150678|gb|AAA98231.1| D-ribulose-5-phosphate 3 epimerase [Plasmid pHG1]
gi|32527422|gb|AAP86172.1| ribulose-5-phosphate 3-epimerase [Ralstonia eutropha H16]
Length = 241
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 93/225 (41%), Positives = 143/225 (63%), Gaps = 7/225 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+I++ PSIL+ADF+RLGEE+ I GA +HFDVMD +V N++ G V ++R
Sbjct: 14 RAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPLVS 73
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D+ I + A AG ++I+FHPE+S H+ R++ I G K G+ +NP TP
Sbjct: 74 IPIDVHLMVEPVDALIPMFAKAGANLISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATP 133
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDG 176
++ L+ +D++D++L+M+VNPGFGGQ I + K+RQA+A I + R + LE+DG
Sbjct: 134 LSWLDHTLDKLDLVLLMSVNPGFGGQAFIPGVLDKVRQARARIDRQVAAGGRPVWLEIDG 193
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSA 220
GV + NI + +AGAD V GS+ F + Y L+ L+++A
Sbjct: 194 GVKADNITEIARAGADTFVAGSAVFGAPDADGGYRGILHRLREAA 238
>gi|291536610|emb|CBL09722.1| ribulose-phosphate 3-epimerase [Roseburia intestinalis M50/1]
Length = 217
Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats.
Identities = 99/214 (46%), Positives = 150/214 (70%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFSRLGE+I + +AGA+ +H DVMDG FVP+ISFG VIR++R+ +D +FD
Sbjct: 4 LSPSILSADFSRLGEQIKELDEAGAQYVHIDVMDGMFVPSISFGMPVIRAIRACTDRIFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I+ A+AG D+IT H ES H+ R++ I G GVAINP TPV+ +
Sbjct: 64 VHLMIEEPGRYIDEFAEAGADLITVHAESCRHLDRTIEKIKEKGLLAGVAINPATPVSAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
V++++DM+L+MTVNPGFGGQ+LI T+ K+R+ + ++ ++ + +EVDGGV N++
Sbjct: 124 SCVLEKVDMVLVMTVNPGFGGQKLIPYTVEKVRELRKIVDEKGLKTDIEVDGGVNLSNVE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L+ AGA+++V GS+ F+ + + LN + +
Sbjct: 184 ELMDAGANIIVAGSAIFSGDVTENTIRFLNIINE 217
>gi|320197340|gb|EFW71955.1| Ribulose-phosphate 3-epimerase [Escherichia coli WV_060327]
Length = 225
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENDCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADIFVAGSAIFDQPD---YKKVIDEMR 216
>gi|326403234|ref|YP_004283315.1| ribulose-5-phosphate 3-epimerase [Acidiphilium multivorum AIU301]
gi|325050095|dbj|BAJ80433.1| ribulose-5-phosphate 3-epimerase [Acidiphilium multivorum AIU301]
Length = 225
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 105/217 (48%), Positives = 145/217 (66%), Gaps = 1/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ LG E + +AGA +H DVMDG FVPN++FG VI ++R + D+VFD
Sbjct: 9 IAPSILSADFATLGAEARAVIEAGADWVHIDVMDGHFVPNLTFGPPVIGAVRKHVDAVFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D I+ +AG DIIT H E+ PH+ R++++I A G GVA+ P TP A L
Sbjct: 69 VHLMIAPVDPFIDAFVEAGADIITVHAEACPHLDRTVQSIRARGCLAGVALCPATPEAAL 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
V+D +D++L+MTVNPGFGGQ + S +PKIR+ + +I R I LE+DGG+T
Sbjct: 129 SYVLDAVDLVLVMTVNPGFGGQTFLRSQLPKIRRIREMIAGRDIRLELDGGITPETAPDA 188
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V AGAD+LV GSS F G +YA + L+ +A+
Sbjct: 189 VAAGADVLVAGSSVFRG-GRAAYAANIAALRAGGMAL 224
>gi|322412719|gb|EFY03627.1| ribulose-phosphate 3-epimerase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 220
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P+ LE ++D +D +LIMTVNPGFGGQ I + K+ ++ + +EVDGGV
Sbjct: 121 PITALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATLAKWRDEKGLAFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ I++ +AGA++ V GS F +S + L
Sbjct: 181 NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215
>gi|257452463|ref|ZP_05617762.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_5R]
gi|317059004|ref|ZP_07923489.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_5R]
gi|313684680|gb|EFS21515.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. 3_1_5R]
Length = 212
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 100/215 (46%), Positives = 144/215 (66%), Gaps = 6/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DFSRLGEEI I +A A IH DVMDG FVPN++FG +I+S+R Y++
Sbjct: 2 EIKIAPSILSSDFSRLGEEIVAIDQAKADYIHIDVMDGIFVPNLTFGPPIIKSIRKYTNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI + +I AG DIIT H ES+ H+ R ++ I + G K V++NP T
Sbjct: 62 IFDVHLMIDKPERYIEDYVKAGADIITVHAESTIHLHRVIQQIKSFGVKAAVSLNPSTSE 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+L+ VI ++DM+L+M+VNPGFGGQ+ I + + KI+ +A+ I +EVDGG+T I
Sbjct: 122 EVLKYVIQDLDMVLVMSVNPGFGGQKFIPAVVDKIKAIRAMRE--DIEIEVDGGITDATI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+S ++AGA V GS F+ +YA+R+ +LK
Sbjct: 180 QSCIEAGATTFVAGSYVFSG----NYAERIANLKN 210
>gi|302517943|ref|ZP_07270285.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SPB78]
gi|302426838|gb|EFK98653.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SPB78]
Length = 229
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 130/217 (59%), Gaps = 4/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 2 AVQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGTPIVEALAKATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEEPDRWAPAYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + L+ K + L +VDGGV++
Sbjct: 120 EQYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLVAKHGLDLWVQVDGGVSAE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ +AGAD+ V GS+ + K S + L +
Sbjct: 180 TVERCAEAGADVFVAGSAVYGAKDPASAVRGLRGQAE 216
>gi|218550642|ref|YP_002384433.1| ribulose-phosphate 3-epimerase [Escherichia fergusonii ATCC 35469]
gi|218358183|emb|CAQ90830.1| D-ribulose-5-phosphate 3-epimerase [Escherichia fergusonii ATCC
35469]
Length = 225
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K ++D++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDDMR 216
>gi|124006027|ref|ZP_01690864.1| ribulose-phosphate 3-epimerase [Microscilla marina ATCC 23134]
gi|123988434|gb|EAY28080.1| ribulose-phosphate 3-epimerase [Microscilla marina ATCC 23134]
Length = 215
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 135/216 (62%), Gaps = 4/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSILAADF+ + +E+ + ++ A IH D+MDG FVPNISFG V+ +++ +
Sbjct: 1 MAP--IIAPSILAADFANIQKEVEMLNESSADWIHIDIMDGMFVPNISFGMPVLAAIQKH 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + ++ G D I+ H E+ PH+ R+L+ + + + GVA+NP
Sbjct: 59 AKKPLDVHLMIEQPERYVETFKKLGADTISVHYEACPHLHRNLQQLRDLDCRVGVALNPH 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
T V +L D + +ID++ +M+VNPGFGGQ+ IE T K+R+ +A+ ++ + +E+DGGV
Sbjct: 119 TSVELLADTLQDIDLVCMMSVNPGFGGQKFIEQTYQKVRKLRAMAEAQNTPLHIEIDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S N L++AGAD+LV GS F + I+ L
Sbjct: 179 NSENAPKLIEAGADVLVAGSFVFRAEDPIATIAGLK 214
>gi|148652396|ref|YP_001279489.1| ribulose-phosphate 3-epimerase [Psychrobacter sp. PRwf-1]
gi|148571480|gb|ABQ93539.1| ribulose-5-phosphate 3-epimerase [Psychrobacter sp. PRwf-1]
Length = 236
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 105/218 (48%), Positives = 150/218 (68%), Gaps = 6/218 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS- 61
I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++FG+ + ++LR Y
Sbjct: 11 REYLIAPSILSADFARLGEEVETVLQAGADVIHFDVMDNHYVPNLTFGSMICKALRDYGI 70
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D+ D HLM+S +DS I ++G IITFHPE+S HI RSL+ I G K G+ +NP T
Sbjct: 71 DAPIDVHLMVSPVDSMIEQFLESGASIITFHPEASNHIDRSLQMIKDGGAKCGLVLNPAT 130
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ L+ V+D++D IL+M+VNPGFGGQ I+ T+ KI+Q + I R I LEVDGGV
Sbjct: 131 PLHYLDYVMDKVDQILLMSVNPGFGGQSFIDGTLDKIKQVRQRIDASGRDIRLEVDGGVK 190
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ NI+++ +AGAD+ V GS+ FNQ Y + +++++
Sbjct: 191 ANNIRAIAEAGADMFVAGSAIFNQPD---YKQAIDEMR 225
>gi|229845695|ref|ZP_04465818.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 6P18H1]
gi|229811381|gb|EEP47087.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 6P18H1]
Length = 224
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 142/225 (63%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D++D++L+M+VNPGFGGQ I +T+ K++QA+ +I + + EVDGG
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQQARKIIDESGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI + AGAD+ V GS F + ++ S A
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSEIFGKPDYKQVIDQIRTQLASVSA 224
>gi|77747495|ref|NP_297501.2| ribulose-phosphate 3-epimerase [Xylella fastidiosa 9a5c]
Length = 223
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 93/225 (41%), Positives = 139/225 (61%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY
Sbjct: 1 MSNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + AG +I+FH E+S H+ R+++ I + G G+ NP
Sbjct: 61 ITAPIDVHLMVEPVDRIVPDFTQAGASMISFHMEASRHVHRTIQLIKSHGCMAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TPV +L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + I R + LEVDGGV
Sbjct: 121 TPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLGRPVRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI ++ +AGAD V GS+ F+ Y + ++ + A+
Sbjct: 181 GIDNIGAIAEAGADTFVAGSAIFHAPD---YGDVIAHMRAAVAAV 222
>gi|146277552|ref|YP_001167711.1| ribulose-phosphate 3-epimerase [Rhodobacter sphaeroides ATCC 17025]
gi|145555793|gb|ABP70406.1| ribulose-5-phosphate 3-epimerase [Rhodobacter sphaeroides ATCC
17025]
Length = 236
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 3/221 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I+I PSIL+ADF+ G E I G +H DVMDG FVPN++FG + ++R +
Sbjct: 5 RRIKIAPSILSADFANFGAECRAIEAQGCDWVHVDVMDGHFVPNLTFGPAMCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI+ +D +I+ A AG D+IT H E+ PHI R+L+ I G K G+A+NP T
Sbjct: 65 GTMDVHLMIAPVDPYIDAFASAGADVITAHLEAGPHIHRTLQAIRGAGCKAGLALNPGTG 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + ++D +D++ +MTVNPGFGGQ+ IES + K+R +ALIG R I +E+DGGVT
Sbjct: 125 LDAVAHLLDLLDLVCVMTVNPGFGGQKFIESQVAKVRDLRALIGDRPIHIEIDGGVTPET 184
Query: 183 IKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKSA 220
+ AGAD+LV GS+ F Y + ++++A
Sbjct: 185 APRVAAAGADVLVAGSAVFKGGSVDNPAPYGANIRAIREAA 225
>gi|329114270|ref|ZP_08243032.1| Ribulose-phosphate 3-epimerase [Acetobacter pomorum DM001]
gi|326696346|gb|EGE48025.1| Ribulose-phosphate 3-epimerase [Acetobacter pomorum DM001]
Length = 225
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/210 (46%), Positives = 139/210 (66%), Gaps = 2/210 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+RLGEE+S + +AGA +H DVMDG FVPNISFG V+++LR SD FD
Sbjct: 9 IAPSVLAADFTRLGEEVSALKQAGADWVHLDVMDGHFVPNISFGPGVVKALRPCSDLPFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D ++ A AG D I H E+ PH RSL+ I +G K G+ + P TP +
Sbjct: 69 VHLMIAPVDPYLEAFAQAGADQILIHIEAGPHTHRSLQRIRDLGAKPGIVLCPATPPEAI 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+V+D +D++L+MTVNPGFGGQ+ + S +PKIR+ + +I +R I L VDGG+ +
Sbjct: 129 GEVLDLVDIVLVMTVNPGFGGQKFLSSQLPKIRRIREMITQSERDIRLAVDGGIDASTAP 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD+L+ GS+ + +K + L
Sbjct: 189 LAIDAGADVLIAGSAVYGKKDYAAAIAALR 218
>gi|146313431|ref|YP_001178505.1| ribulose-phosphate 3-epimerase [Enterobacter sp. 638]
gi|145320307|gb|ABP62454.1| ribulose-5-phosphate 3-epimerase [Enterobacter sp. 638]
Length = 225
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 140/219 (63%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ +N AGA +HFDVMD +VPN++ G V+++LR+Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTANALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T ++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV
Sbjct: 121 TSLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F+Q Y K +++++
Sbjct: 181 KVNNIGEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|257463683|ref|ZP_05628073.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D12]
gi|317061230|ref|ZP_07925715.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D12]
gi|313686906|gb|EFS23741.1| ribulose-phosphate 3-epimerase [Fusobacterium sp. D12]
Length = 212
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 6/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DFSRLGEEI I +A A IH DVMDG FVPN++FG VI+S+R Y++
Sbjct: 2 EIKIAPSILSSDFSRLGEEIVAIDQAKADYIHIDVMDGIFVPNLTFGPPVIKSIRKYTNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI + +I AG DIIT H ES+ H+ R ++ I + G K V++NP T
Sbjct: 62 IFDVHLMIDRPERYIEDYVKAGADIITVHAESTIHLHRVIQQIKSFGVKAAVSLNPSTSE 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+L+ +I ++DM+L+M+VNPGFGGQ I + I KI+ +A+ I +EVDGG+T I
Sbjct: 122 EVLKYIIHDLDMVLVMSVNPGFGGQTFIPAVIDKIKAIRAMRE--DIEIEVDGGITDTTI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ V+AGA V GS F+ +YA+R+ +LK
Sbjct: 180 QACVEAGASTFVAGSYVFSG----NYAERIANLKN 210
>gi|170696276|ref|ZP_02887408.1| Ribulose-phosphate 3-epimerase [Burkholderia graminis C4D1M]
gi|170138836|gb|EDT07032.1| Ribulose-phosphate 3-epimerase [Burkholderia graminis C4D1M]
Length = 238
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 100/228 (43%), Positives = 136/228 (59%), Gaps = 11/228 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 12 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 71 VGVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T + L+ V+D++D++LIM+VNPGFGGQ I + K+R+A+ I R I LEV
Sbjct: 131 TSLNYLDHVMDKLDLVLIMSVNPGFGGQSFIPEALNKLREARKRIDAYKERTGRDIHLEV 190
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGGV NI + AGAD V GS+ F Q ++ +ALA
Sbjct: 191 DGGVKVDNIAEIAAAGADTFVAGSAIFGQPDHKVVIDKMR----AALA 234
>gi|288933228|ref|YP_003437287.1| ribulose-phosphate 3-epimerase [Klebsiella variicola At-22]
gi|290512032|ref|ZP_06551400.1| ribulose-phosphate 3-epimerase [Klebsiella sp. 1_1_55]
gi|288887957|gb|ADC56275.1| ribulose-phosphate 3-epimerase [Klebsiella variicola At-22]
gi|289775822|gb|EFD83822.1| ribulose-phosphate 3-epimerase [Klebsiella sp. 1_1_55]
Length = 225
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 138/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG IITFHPE+S H+ RSL+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV + NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRQRIDASGYDIRLEVDGGVKASNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F Q Y K ++ ++
Sbjct: 186 GEIAAAGADMFVAGSAIFGQPD---YKKVIDQMR 216
>gi|262277832|ref|ZP_06055625.1| ribulose-phosphate 3-epimerase [alpha proteobacterium HIMB114]
gi|262224935|gb|EEY75394.1| ribulose-phosphate 3-epimerase [alpha proteobacterium HIMB114]
Length = 218
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 144/218 (66%), Gaps = 4/218 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+ DFS +G EI + +GA IH DVMDG FVPN++FG VI +R S
Sbjct: 3 QIKISPSILSCDFSEIGSEIEKLNNSGADLIHIDVMDGHFVPNLTFGPPVISKIRKCSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMIS ++ +I ADAG DIITFHPE++ +I+R++ I + KK G+++NPETP
Sbjct: 63 PFDVHLMISPVEKYIQDYADAGADIITFHPEATDNIQRTINVIKSCKKKVGISLNPETPS 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
++E+ + EID+ILIM+VNPGF GQ+ + + K++ ++ I +I +E+DGG+
Sbjct: 123 TVIENYLKEIDLILIMSVNPGFAGQKFMPEVLEKVKFFRSKIKNENLNIDIEIDGGIDFE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++AGA++LV G++ F + IS + + +L+K
Sbjct: 183 TAPLAIKAGANILVSGTTIFKGENNIS--ENIKNLRKQ 218
>gi|289578501|ref|YP_003477128.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter italicus Ab9]
gi|289528214|gb|ADD02566.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter italicus Ab9]
Length = 216
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 143/217 (65%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F+ L E++ I K A +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKIAPSILSANFANLLEDVKKIEK-DADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSIP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I ++G DIIT H E+ H+ R+++ I + GKK GV++NP TP+
Sbjct: 60 FDVHLMIENPDLYIEDFVNSGADIITVHQEACIHLHRTIQKIKSYGKKAGVSLNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ V+ +IDM+LIMTVNPGFGGQ+ I+S + KI + K + ++ +EVDGG+ N
Sbjct: 120 SIKYVLQDIDMVLIMTVNPGFGGQKFIDSMLKKIEEIKKMREDLGLNFEIEVDGGINLYN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K +V+AG D++V GSS F A+ + + +K+
Sbjct: 180 VKEVVEAGTDIIVAGSSIFESSDP---AQTIKEFRKA 213
>gi|320334954|ref|YP_004171665.1| ribulose-phosphate 3-epimerase [Deinococcus maricopensis DSM 21211]
gi|319756243|gb|ADV68000.1| ribulose-phosphate 3-epimerase [Deinococcus maricopensis DSM 21211]
Length = 223
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 132/216 (61%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ S ++ PSIL+ DFSRLG+E+ I + GA +H DVMDG FVPNISFG ++ + R +
Sbjct: 5 SRSPRLAPSILSCDFSRLGDELRAIQQGGADLVHVDVMDGLFVPNISFGLPILAAARRAT 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI + +I+ AG D +T H E++ H+ R ++ I A G+ GV +NP T
Sbjct: 65 DQYLDVHLMIEQPERYIDAFVQAGADGLTVHVEATRHLHRVVQQIRAHGRDAGVTLNPGT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
P+ L V+ ++ +LIM+VNPGFGGQ I S + +IR +A + LEVDGGV
Sbjct: 125 PLETLRPVLADVQRVLIMSVNPGFGGQAFIPSALDRIRAVRAWLDDVNPDAHLEVDGGVG 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI++L+ AGA+ V GSS F G +RL +
Sbjct: 185 PANIRALMDAGANEFVAGSSVFGADGPAEGLRRLRE 220
>gi|225377862|ref|ZP_03755083.1| hypothetical protein ROSEINA2194_03521 [Roseburia inulinivorans DSM
16841]
gi|225210300|gb|EEG92654.1| hypothetical protein ROSEINA2194_03521 [Roseburia inulinivorans DSM
16841]
Length = 232
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 146/214 (68%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ LGE++ + +AGA+ +H DVMDG FVP+ISFG VI+S+R SD +FD
Sbjct: 19 LSPSILSADFANLGEQVRMLDEAGAQYVHIDVMDGMFVPSISFGMPVIKSIRECSDRIFD 78
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I+ +A+ G D+IT H E+ H+ R++ I G GVA+NP TP++ +
Sbjct: 79 VHLMIEEPGRYIDDLAEVGADLITVHAEACKHLDRTIEAIKEKGLLAGVALNPATPLSAI 138
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E ++ ++DM+LIM+VNPGFGGQ+LI T+ K+R K +I ++ I +EVDGGV N+
Sbjct: 139 EWILPKVDMVLIMSVNPGFGGQKLIPYTVEKVRALKKMIDEKGLKIDIEVDGGVNLENVT 198
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ AGA+++V GS+ F + + L+ LK+
Sbjct: 199 EVMDAGANIIVAGSAVFKGDISENVERFLDVLKE 232
>gi|170724716|ref|YP_001758742.1| ribulose-phosphate 3-epimerase [Shewanella woodyi ATCC 51908]
gi|169810063|gb|ACA84647.1| Ribulose-phosphate 3-epimerase [Shewanella woodyi ATCC 51908]
Length = 224
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 102/227 (44%), Positives = 143/227 (62%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRIIPDFAKAGASIITFHPEASEHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + LI + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRKLIDDSGYDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ FN+ Y +++++ +I+
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNKPD---YKAVIDEMRSELASIE 223
>gi|39998463|ref|NP_954414.1| ribulose-phosphate 3-epimerase [Geobacter sulfurreducens PCA]
gi|39985410|gb|AAR36764.1| ribulose-phosphate 3-epimerase [Geobacter sulfurreducens PCA]
gi|298507407|gb|ADI86130.1| ribulose-phosphate 3-epimerase [Geobacter sulfurreducens KN400]
Length = 221
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 144/217 (66%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R ++
Sbjct: 3 KIAPSILSADFSRLGDEVRAVAAAGADYIHVDVMDGHFVPNITIGPLVVEAVRRVTELPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D +I A AG DII H E+S H+ R+++ I ++GKK GV++NP TP+
Sbjct: 63 DVHLMIEHPDRYIPDFAAAGSDIIVVHAEASTHLHRTIQLIKSLGKKAGVSLNPATPLNC 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++++D++L+MTVNPGFGGQ IE+ IPKI+ +A++ +R LEVDGGV NI
Sbjct: 123 LDYVLEDLDLVLLMTVNPGFGGQSFIEACIPKIQSLRAMLDRRGCEAELEVDGGVKIDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ F Y + +LK+ A
Sbjct: 183 ARIAHAGADVFVAGSAIFGSPD---YEATIKELKRRA 216
>gi|187930189|ref|YP_001900676.1| ribulose-phosphate 3-epimerase [Ralstonia pickettii 12J]
gi|187727079|gb|ACD28244.1| Ribulose-phosphate 3-epimerase [Ralstonia pickettii 12J]
Length = 241
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 138/227 (60%), Gaps = 12/227 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS- 63
+I PSIL+ADF+RLGEE+ + ++GA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVLESGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQKD 69
Query: 64 ----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+S +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVSPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDNGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALNKLRAVRQKLDAYQDKTGRKILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKS 219
+DGGV + NI + +AGAD V GS+ F + + Y + L+++
Sbjct: 190 IDGGVKADNIAEIAKAGADTFVAGSAVFGKPDADGGYRGTVGALRQA 236
>gi|3264792|gb|AAC24710.1| ribulose-phosphate 3-epimerase mature form [Expression vector
pFL506]
Length = 237
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 137/221 (61%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 11 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 70
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 71 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNP 130
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D++LIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 131 GTPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCVEKGVNPWIEVDGG 190
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
VT N +++AGA+ LV GS+ F K K + K+
Sbjct: 191 VTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKR 231
>gi|114566749|ref|YP_753903.1| ribulose-phosphate 3-epimerase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337684|gb|ABI68532.1| ribulose-5-phosphate 3-epimerase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 218
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 133/214 (62%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+A+F+ LGE+I + +AGA +H DVMDG FVPN++ G V+ +RS S
Sbjct: 2 ILVAPSILSANFTHLGEDIRKVEEAGADWLHIDVMDGHFVPNLTIGPQVVADIRSRSKLF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ +S I + +AG D++T H ES PH+ R + I G K GVA+NP + +
Sbjct: 62 FDVHLMVEKPESLIAVFVEAGADLLTVHYESCPHLHRVVHMIKDAGIKAGVALNPASSIM 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+LE++I E+D++L+M+VNPGFGGQ I + KI +A+ L+ L+VDGG+
Sbjct: 122 LLENIISELDLLLLMSVNPGFGGQSFIPGVLDKITKARKLLESTGSPAYLQVDGGINLET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +V+AG ++LV GS F K L +L
Sbjct: 182 ARQVVEAGCNVLVAGSYVFKSPEPGEAVKSLKNL 215
>gi|4105561|gb|AAD09955.1| ribulose-5-phosphate-3-epimerase [Oryza sativa]
Length = 274
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/226 (39%), Positives = 140/226 (61%), Gaps = 7/226 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 48 KNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 107
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 108 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNP 167
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++ V+D +D++LIM+VNPGFGGQ IES + KI + + + ++ ++ +EVDGG
Sbjct: 168 ATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRKYVAEKGVNPWIEVDGG 227
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V +N +++AGA+ +V GS+ F YA+ + +K S +
Sbjct: 228 VGPKNAYKVIEAGANAIVAGSAVFGAPD---YAEAIKGIKTSKRPV 270
>gi|326335969|ref|ZP_08202146.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691933|gb|EGD33895.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 215
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PS+LAADF+ L +I + ++ A H DVMDG FVPNIS+G V++++ Y+
Sbjct: 1 MLIAPSLLAADFANLQRDIEMVNRSQADWFHIDVMDGVFVPNISYGMPVVKAIHKYAQKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +++ A G ++ H E+ H+ R+L+ I G K GVA+NP TP++
Sbjct: 61 LDVHLMIIDPDRYLHAFAQLGSTTLSVHYEACVHLHRTLQAIKQEGMKAGVALNPHTPIS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+LED+I E+D++LIM+VNPGFGGQ IE+T K+RQAK LI + +EVDGGV + N
Sbjct: 121 VLEDIITEVDLLLIMSVNPGFGGQSFIENTYKKVRQAKELILRNHAKTLIEVDGGVNATN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
LV+AGAD+LV GS FN L
Sbjct: 181 APELVKAGADVLVAGSFVFNAPNPEETIAALKA 213
>gi|332163306|ref|YP_004299883.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318607795|emb|CBY29293.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667536|gb|ADZ44180.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861912|emb|CBX72082.1| ribulose-phosphate 3-epimerase [Yersinia enterocolitica W22703]
Length = 225
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 135/217 (62%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K++Q + LI + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLKQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+++ AGAD+ V GS+ FNQ + +
Sbjct: 181 KVDNIRAIAAAGADMFVAGSAIFNQPDYAAVIDAMRS 217
>gi|251783336|ref|YP_002997641.1| ribulose-phosphate 3-epimerase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391968|dbj|BAH82427.1| ribulose-phosphate 3-epimerase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323128059|gb|ADX25356.1| ribulose-phosphate 3-epimerase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 220
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P+ LE ++D +D +LIMTVNPGFGGQ I + K+ ++ + +EVDGGV
Sbjct: 121 PITALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVTTLAKWRDEKGLAFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ I++ +AGA++ V GS F +S + L
Sbjct: 181 NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215
>gi|317503451|ref|ZP_07961489.1| ribulose-phosphate 3-epimerase [Prevotella salivae DSM 15606]
gi|315665439|gb|EFV05068.1| ribulose-phosphate 3-epimerase [Prevotella salivae DSM 15606]
Length = 217
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L +EI I + A +H DVMDG FVPNISFG ++ ++ D
Sbjct: 5 VSPSLLAADFLHLKDEIEMINNSEADWLHLDVMDGFFVPNISFGFPILEAVSKVCKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV +L
Sbjct: 65 VHFMIVHPEQYIEQTAKIGAMMMNVHYEACTHLHRTIQQIHAAGMKAGVTLNPSTPVFML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE+TI K+ + + LI + +EVDGGV +
Sbjct: 125 EDIIRDVDMVLLMSVNPGFGGQKFIENTIRKVERLRRLINETGSHALIEVDGGVQAETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
LV+AG D+LV GS F + + L LK
Sbjct: 185 RLVKAGVDVLVSGSYVFKSTDPYATIEALKKLK 217
>gi|307140070|ref|ZP_07499426.1| ribulose-phosphate 3-epimerase [Escherichia coli H736]
gi|331644085|ref|ZP_08345214.1| ribulose-phosphate 3-epimerase [Escherichia coli H736]
gi|331036379|gb|EGI08605.1| ribulose-phosphate 3-epimerase [Escherichia coli H736]
Length = 225
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDEAGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|283797839|ref|ZP_06346992.1| ribulose-phosphate 3-epimerase [Clostridium sp. M62/1]
gi|291074527|gb|EFE11891.1| ribulose-phosphate 3-epimerase [Clostridium sp. M62/1]
gi|295091948|emb|CBK78055.1| ribulose-phosphate 3-epimerase [Clostridium cf. saccharolyticum
K10]
Length = 219
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL ADFS LGE+I + +AGA+ IH DVMDG FVP+ISFG VI+ LR ++ V
Sbjct: 2 IRLAPSILGADFSHLGEQIQTVDEAGAQYIHLDVMDGAFVPSISFGMPVIQRLRPLTERV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ ++ + AG D+I H E+ H+ R++ I +G K VA+NP TPV+
Sbjct: 62 FDVHMMVEEPGRYVEDMKKAGADLICVHQEACCHLDRTVNQIKELGLKAAVALNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L ++ EIDM LIM+VNPGFGGQ+ I T+ K+R+ + + +R + ++VDGGV N
Sbjct: 122 TLSCILGEIDMALIMSVNPGFGGQKFIPYTLEKVRELRRMSDERGLDLDIQVDGGVGLDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ +++AGA+++V GS+ F + L ++
Sbjct: 182 VRQVIEAGANVIVAGSAVFKGDAAANTRAFLEIFRE 217
>gi|71902884|ref|YP_279687.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS6180]
gi|71801979|gb|AAX71332.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS6180]
Length = 220
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVDPERYVEAFAQAGVDIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P LE ++D +D +LIMTVNPGFGGQ I + K+ ++ + +EVDGGV
Sbjct: 121 PATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ I++ +AGA++ V GS F +S + L
Sbjct: 181 NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215
>gi|15674444|ref|NP_268618.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes M1 GAS]
gi|19745396|ref|NP_606532.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS8232]
gi|50913602|ref|YP_059574.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10394]
gi|56808436|ref|ZP_00366183.1| COG0036: Pentose-5-phosphate-3-epimerase [Streptococcus pyogenes
M49 591]
gi|71910038|ref|YP_281588.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS5005]
gi|94989733|ref|YP_597833.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10270]
gi|94993615|ref|YP_601713.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10750]
gi|139473082|ref|YP_001127797.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes str.
Manfredo]
gi|209558788|ref|YP_002285260.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes NZ131]
gi|93279627|pdb|2FLI|A Chain A, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279628|pdb|2FLI|B Chain B, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279629|pdb|2FLI|C Chain C, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279630|pdb|2FLI|D Chain D, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279631|pdb|2FLI|E Chain E, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279632|pdb|2FLI|F Chain F, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279633|pdb|2FLI|G Chain G, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279634|pdb|2FLI|H Chain H, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279635|pdb|2FLI|I Chain I, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279636|pdb|2FLI|J Chain J, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279637|pdb|2FLI|K Chain K, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|93279638|pdb|2FLI|L Chain L, The Crystal Structure Of D-Ribulose 5-Phosphate
3-Epimerase From Streptococus Pyogenes Complexed With
D-Xylitol 5- Phosphate
gi|13621540|gb|AAK33339.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes M1
GAS]
gi|19747504|gb|AAL97031.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes
MGAS8232]
gi|50902676|gb|AAT86391.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10394]
gi|71852820|gb|AAZ50843.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS5005]
gi|94543241|gb|ABF33289.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10270]
gi|94547123|gb|ABF37169.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS10750]
gi|134271328|emb|CAM29546.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes
str. Manfredo]
gi|209539989|gb|ACI60565.1| Ribulose-phosphate 3-epimerase [Streptococcus pyogenes NZ131]
Length = 220
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P LE ++D +D +LIMTVNPGFGGQ I + K+ ++ + +EVDGGV
Sbjct: 121 PATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ I++ +AGA++ V GS F +S + L
Sbjct: 181 NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215
>gi|323345408|ref|ZP_08085631.1| ribulose-phosphate 3-epimerase [Prevotella oralis ATCC 33269]
gi|323093522|gb|EFZ36100.1| ribulose-phosphate 3-epimerase [Prevotella oralis ATCC 33269]
Length = 216
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+ L +I I ++ A +H DVMDG FVPNISFG VI ++ D
Sbjct: 5 ISPSLLSADFTNLKADIEMINRSEADWLHMDVMDGVFVPNISFGFPVINAVSKICKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ A G ++ H E+ H+ R+++ IHA G K GVA+NP TP+ +L
Sbjct: 65 VHLMIVQPERYVEQTAKCGAMMMCVHYEACTHLHRTVQEIHAKGMKAGVALNPSTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE+ + K+ + + +I +EVDGGV +
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQKFIENVLQKVARLRHMIELSGSKALIEVDGGVQNETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD+LV GS F I L +L
Sbjct: 185 KLINAGADVLVSGSYIFRSANPIQTIHELKNL 216
>gi|303239353|ref|ZP_07325881.1| ribulose-phosphate 3-epimerase [Acetivibrio cellulolyticus CD2]
gi|302593139|gb|EFL62859.1| ribulose-phosphate 3-epimerase [Acetivibrio cellulolyticus CD2]
Length = 217
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 105/218 (48%), Positives = 147/218 (67%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI I KAGA +H DVMDG FVPNI+ G ++++LR ++
Sbjct: 2 IKISPSILSADFSKLGEEIIRIEKAGADLVHIDVMDGHFVPNITLGPPIVKALRKVTNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I+ DAG DIIT H ESS H+ R+++ I G K A+NP TP+
Sbjct: 62 FDVHLMIQDADKYIDSFVDAGADIITVHVESSCHLHRTIQKIKQHGIKASAALNPATPLN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
L+ V+DE+DM+L+MTVNPGFGGQ+ I+S KI+ + + R I +EVDGG+ S N
Sbjct: 122 ALDWVLDELDMVLLMTVNPGFGGQKYIDSVTQKIKALRDNLVCRGINVDIEVDGGIDSNN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + +AGA+++V GS+ FN ++ + +LK+ A
Sbjct: 182 IYKVTEAGANIIVSGSTIFNSPD---TSQIIRELKEKA 216
>gi|157960073|ref|YP_001500107.1| ribulose-phosphate 3-epimerase [Shewanella pealeana ATCC 700345]
gi|157845073|gb|ABV85572.1| Ribulose-phosphate 3-epimerase [Shewanella pealeana ATCC 700345]
Length = 224
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 145/227 (63%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MRP-FLIAPSILSADFARLGEDVDAVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRIIPDFAEAGASIITFHPEASEHVDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + LI + +VDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPTTLDKLRQVRKLIDDSGYDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ FN+ Y +++++ +++
Sbjct: 180 VKVDNIGEIAAAGADMFVAGSAIFNKPD---YKAVIDEMRAELASVE 223
>gi|110834903|ref|YP_693762.1| ribulose-phosphate 3-epimerase [Alcanivorax borkumensis SK2]
gi|110648014|emb|CAL17490.1| ribulose-phosphate 3-epimerase [Alcanivorax borkumensis SK2]
Length = 224
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSILAA+F+RLGEE + AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 8 IAPSILAANFARLGEECDAVLAAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGITAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I++ A+AG ITFHPE+S H+ RSL+ I + G K G+ +NP T
Sbjct: 68 DVHLMVSPVDELISMFAEAGASYITFHPEASQHVDRSLQLIKSYGCKAGLVLNPATRPDC 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
LE V+D++DMIL+M+VNPG+GGQ I ST+ K R + LI + EVDGGV+ +NI
Sbjct: 128 LEYVMDKLDMILLMSVNPGYGGQTFIPSTLDKTRAVRQLIDASGYDIRLEVDGGVSEKNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + AGAD V GS+ F ++ + +++ D
Sbjct: 188 REVAAAGADTFVAGSAIFGKENYAAVIQQMRD 219
>gi|261341885|ref|ZP_05969743.1| ribulose-phosphate 3-epimerase [Enterobacter cancerogenus ATCC
35316]
gi|288315786|gb|EFC54724.1| ribulose-phosphate 3-epimerase [Enterobacter cancerogenus ATCC
35316]
Length = 225
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 141/219 (64%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ ++ AGA +HFDVMD +VPN++ G V+++LR+Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTASALAAGADVVHFDVMDNHYVPNLTIGPMVLKALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV
Sbjct: 121 TPLSYLDHVMDKLDVILLMSVNPGFGGQSFIPHTLDKLREVRRRIDESGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F+Q Y K +++++
Sbjct: 181 KVNNIGEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|238797283|ref|ZP_04640784.1| Ribulose-phosphate 3-epimerase [Yersinia mollaretii ATCC 43969]
gi|238718920|gb|EEQ10735.1| Ribulose-phosphate 3-epimerase [Yersinia mollaretii ATCC 43969]
Length = 225
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTAKVLAAGADIVHFDVMDNHYVPNLTIGPMVCQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGATYISFHPEASEHVDRTLQLIKESGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T ++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + EVDGGV
Sbjct: 121 TSLSYLDYVMDKLDVILLMSVNPGFGGQSFIPETLNKLRQVRKLIDDSGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
NI+ + AGAD+ V GS+ F+Q + + +L SA
Sbjct: 181 KVDNIRQIAAAGADMFVAGSAIFSQPDYAAVIDAMRSELAMSA 223
>gi|255647180|gb|ACU24058.1| unknown [Glycine max]
Length = 280
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/222 (40%), Positives = 137/222 (61%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+FS+LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 54 KSDIIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 113
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + + AG DI++ H E S+ H+ R++ + ++G K GV +NP
Sbjct: 114 DLPLGVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQVKSLGAKAGVVLNP 173
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E ++D +D++LIM+VNPGFGGQ IES + KI + L ++ ++ +EVDGG
Sbjct: 174 GTPLSAIEYILDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGG 233
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V N +++AGA+ LV G + F K YA+ + +K S
Sbjct: 234 VGPANAYKVIEAGANALVAGFAVFGAKD---YAETIRGIKTS 272
>gi|301063990|ref|ZP_07204455.1| ribulose-phosphate 3-epimerase [delta proteobacterium NaphS2]
gi|300441901|gb|EFK06201.1| ribulose-phosphate 3-epimerase [delta proteobacterium NaphS2]
Length = 216
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 138/216 (63%), Gaps = 5/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEEI + KAGA +H DVMDG FVPNI+ G V+ ++R +D F
Sbjct: 3 KIAPSILSADFTRLGEEILAVVKAGADYLHIDVMDGHFVPNITIGPLVVEAVRPTTDIPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMIS + +I AG +II+ H E++ H+ R+L I G K VA+NP TPV +
Sbjct: 63 DVHLMISQPELYIEDFVKAGANIISIHAETAIHLHRTLCHIRDCGAKAAVALNPATPVGV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ V++++DM+LIM+VNPGF Q+ I +PKI + I + + +EVDGGV I
Sbjct: 123 LDHVMNQLDMVLIMSVNPGFEAQKFIPEVLPKISALRKKIDELGLDIEIEVDGGVNHETI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGAD+ V GS+ ++ K Y + DLK++
Sbjct: 183 GRVSSAGADVFVAGSAIYHSKD---YVATIRDLKRN 215
>gi|255657710|ref|ZP_05403119.1| ribulose-phosphate 3-epimerase [Mitsuokella multacida DSM 20544]
gi|260849898|gb|EEX69905.1| ribulose-phosphate 3-epimerase [Mitsuokella multacida DSM 20544]
Length = 214
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ L +E+ +T AGA IH DVMDG +VPNI+ G+ V++SLR S V
Sbjct: 2 IKIAPSILSADFAHLADEVKRVTDAGADYIHIDVMDGTYVPNITLGSPVVKSLRKASKGV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ ++ I A+AG DIITFH E++ H R ++ I A G K G+A+NP T +A
Sbjct: 62 FDVHLMVEHPETQIEAFAEAGADIITFHIEAAKHSHRIVQQIKAAGCKAGIALNPGTSLA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E+++ ++DM+LIMTVNPGFGGQ+ IES + KI + I +EVDGG+
Sbjct: 122 MIEELLQDLDMVLIMTVNPGFGGQKFIESQLEKIHMLRHTIQDMGFDCDIEVDGGINEET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + QAGA++LV GS+ + + K++
Sbjct: 182 SRLVRQAGANVLVAGSAIYGAENIEEAIKKIR 213
>gi|281424247|ref|ZP_06255160.1| ribulose-phosphate 3-epimerase [Prevotella oris F0302]
gi|281401516|gb|EFB32347.1| ribulose-phosphate 3-epimerase [Prevotella oris F0302]
Length = 217
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L +EI I + A +H D+MDG FVPNISFG V+ ++ D
Sbjct: 5 VSPSLLAADFLNLKDEIEMINNSQADWLHMDIMDGVFVPNISFGFPVLEAVSKVCKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV++L
Sbjct: 65 VHFMIVHPEQYIEQTAKLGAMMMNVHYETCTHLHRTIQQIHAAGMKAGVTLNPSTPVSML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE+TI K+++ + +I +E+DGGV
Sbjct: 125 EDIIYDVDMVLLMSVNPGFGGQKFIENTIRKVKRLRKMIDDAGTHTLIEIDGGVQGETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV GS F + + L L
Sbjct: 185 RLVKAGADVLVSGSYVFKSADPHATIEALKKL 216
>gi|318057053|ref|ZP_07975776.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SA3_actG]
gi|318078494|ref|ZP_07985826.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SA3_actF]
gi|333028381|ref|ZP_08456445.1| putative ribulose-phosphate 3-epimerase [Streptomyces sp. Tu6071]
gi|332748233|gb|EGJ78674.1| putative ribulose-phosphate 3-epimerase [Streptomyces sp. Tu6071]
Length = 228
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 130/217 (59%), Gaps = 4/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 2 AVQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGTPIVEALAKATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEEPDRWAPAYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + L+ K + L +VDGGV++
Sbjct: 120 EQYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLVAKHGLDLWVQVDGGVSAE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ +AGAD+ V GS+ + K S + L +
Sbjct: 180 TVERCAEAGADVFVAGSAVYGAKDPASAVRGLRGQAE 216
>gi|16766771|ref|NP_462386.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62181985|ref|YP_218402.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161616519|ref|YP_001590484.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167994588|ref|ZP_02575679.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168465253|ref|ZP_02699145.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194443940|ref|YP_002042733.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|198245033|ref|YP_002217444.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205354893|ref|YP_002228694.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858723|ref|YP_002245374.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224585277|ref|YP_002639076.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|16422041|gb|AAL22345.1| D-ribulose-5-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62129618|gb|AAX67321.1| D-ribulose-5-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161365883|gb|ABX69651.1| hypothetical protein SPAB_04334 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402603|gb|ACF62825.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195632218|gb|EDX50702.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197939549|gb|ACH76882.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205274674|emb|CAR39728.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205327586|gb|EDZ14350.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|206710526|emb|CAR34884.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469805|gb|ACN47635.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248638|emb|CBG26476.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995700|gb|ACY90585.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160026|emb|CBW19545.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914507|dbj|BAJ38481.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321226532|gb|EFX51582.1| Ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322716473|gb|EFZ08044.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323131842|gb|ADX19272.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326625225|gb|EGE31570.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630039|gb|EGE36382.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332990335|gb|AEF09318.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 225
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F + Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIF---DKPDYKKVIDEMR 216
>gi|330447071|ref|ZP_08310721.1| ribulose-phosphate 3-epimerase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491262|dbj|GAA05218.1| ribulose-phosphate 3-epimerase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 224
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 143/222 (64%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA IHFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVIHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS I A AG +ITFH E+S HI R+L+ I G K GV NP
Sbjct: 61 ITAPIDVHLMVKPVDSIIPDFAKAGASMITFHVEASEHIDRTLQLIKEHGCKAGVVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++DMIL+M+VNPGFGGQ I ST+ K+R+ + I R I LE+DGGV
Sbjct: 121 TPLHYLDYIMDKVDMILLMSVNPGFGGQSFIPSTLDKLREVRKRIDASGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
NI+ + +AGAD+ V GS+ FN+ ++ +L ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFNEPDYKVAIDKMRAELAEA 222
>gi|92114449|ref|YP_574377.1| ribulose-5-phosphate 3-epimerase [Chromohalobacter salexigens DSM
3043]
gi|91797539|gb|ABE59678.1| ribulose-5-phosphate 3-epimerase [Chromohalobacter salexigens DSM
3043]
Length = 228
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 97/210 (46%), Positives = 134/210 (63%), Gaps = 3/210 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P +I PSIL+ADF+RLG+E+ ++ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MPDFKIAPSILSADFARLGQEVDDVLASGADIVHFDVMDNHYVPNLTIGPMVCEALRKHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I DAG ITFHPE+S HI RSL+ I G + G+ NP
Sbjct: 61 VTAPIDAHLMVKPVDRLIGDFIDAGASYITFHPEASEHIDRSLQLIRDGGCRAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+A L+ V+D++DM+L+M+VNPGFGGQ I T+ K+R+ + I R I LEVDGGV
Sbjct: 121 TPLAYLDHVMDKLDMVLLMSVNPGFGGQSFIPGTLDKLREVRQRIDASGRDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
NI + +AGAD V GS+ F + E
Sbjct: 181 KVDNIAEIARAGADTFVAGSAIFKARDEAD 210
>gi|168235073|ref|ZP_02660131.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194735372|ref|YP_002116426.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|200386859|ref|ZP_03213471.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|194710874|gb|ACF90095.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197291568|gb|EDY30920.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199603957|gb|EDZ02502.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|322614143|gb|EFY11079.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618034|gb|EFY14927.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625351|gb|EFY22177.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629816|gb|EFY26589.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632295|gb|EFY29046.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636354|gb|EFY33061.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322643210|gb|EFY39779.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644565|gb|EFY41102.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651187|gb|EFY47571.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654945|gb|EFY51260.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659202|gb|EFY55454.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663097|gb|EFY59301.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668583|gb|EFY64736.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674613|gb|EFY70706.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678181|gb|EFY74242.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682562|gb|EFY78583.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684275|gb|EFY80281.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192170|gb|EFZ77402.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196404|gb|EFZ81556.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201795|gb|EFZ86858.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206337|gb|EFZ91298.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211931|gb|EFZ96758.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216836|gb|EGA01559.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222235|gb|EGA06618.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227370|gb|EGA11536.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228178|gb|EGA12309.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233555|gb|EGA17648.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323236983|gb|EGA21050.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243802|gb|EGA27818.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323245955|gb|EGA29942.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250732|gb|EGA34610.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323255743|gb|EGA39493.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261399|gb|EGA44985.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267628|gb|EGA51110.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268509|gb|EGA51976.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 225
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F + Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIF---DKPDYKKVIDEMR 216
>gi|83943667|ref|ZP_00956125.1| ribulose-phosphate 3-epimerase [Sulfitobacter sp. EE-36]
gi|83845347|gb|EAP83226.1| ribulose-phosphate 3-epimerase [Sulfitobacter sp. EE-36]
Length = 229
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 104/228 (45%), Positives = 142/228 (62%), Gaps = 6/228 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT SI+I PSILAADF+ G E I GA +H DVMDG FVPNISFG ++R
Sbjct: 1 MTFDRSIKIAPSILAADFANFGAECEAIEAQGADWVHVDVMDGHFVPNISFGPTTCAAIR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ V D HLMI+ +D +I+ A AG D+IT H E+ PHI R+L+ I G K GVA+N
Sbjct: 61 PHIKGVMDVHLMIAPVDPYIDAFAKAGADVITAHVEAGPHIHRTLQAIRGAGAKAGVALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TP A +E ++D D++ +MTVNPGFGGQ+ I+ + KIR +A+IG R + +E+DGGV
Sbjct: 121 PGTPAAAVEHLLDVADLVCVMTVNPGFGGQKFIDMS-DKIRTLRAMIGDRPVHIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
S+ QAGAD+LV GS+ F Y + + ++ +A +
Sbjct: 180 DVNTASSVAQAGADVLVAGSAVFRGGSVSNPAPYGENIRAIRAAAEGV 227
>gi|257126922|ref|YP_003165036.1| ribulose-phosphate 3-epimerase [Leptotrichia buccalis C-1013-b]
gi|257050861|gb|ACV40045.1| ribulose-phosphate 3-epimerase [Leptotrichia buccalis C-1013-b]
Length = 212
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 143/212 (67%), Gaps = 7/212 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L ADFS+L EEI+ + K GA+ +H DVMDG FVPNISFGA VI SLR +S+ VF
Sbjct: 8 IIAPSLLTADFSKLKEEITEVEKLGAEYLHLDVMDGNFVPNISFGAPVISSLRKHSNLVF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ D I A DIIT H E++ H+ R+++ I + GKK GVA+NP TP+ +
Sbjct: 68 DVHLMVNEPDYLIEGFAQF-SDIITVHAEATKHLNRTIQLIKSFGKKVGVALNPSTPLDV 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
++ +D IDM+LIMTVNPGFGGQ+ I + KI+ + + +I +EVDGG+ + K
Sbjct: 127 IKYDLDNIDMVLIMTVNPGFGGQKFIPEMLQKIKDLRKINE--NIDIEVDGGINAETAKL 184
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +AGA++LV GS F+ +Y +++ LK
Sbjct: 185 VKEAGANVLVAGSYIFSG----NYKEKIESLK 212
>gi|300690304|ref|YP_003751299.1| D-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum PSI07]
gi|299077364|emb|CBJ49990.1| D-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum PSI07]
Length = 242
Score = 275 bits (703), Expect = 5e-72, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 137/231 (59%), Gaps = 12/231 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS--- 61
+I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVIEAGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQRD 69
Query: 62 --DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIREQGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALNKLRAVRQKLDAYAERTGRRILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSALAI 223
+DGGV + NI + +AGAD V GS+ F + + Y + L+ + +
Sbjct: 190 IDGGVKADNIAEIARAGADTFVAGSAVFGKPDVDGGYRGTVGALRSALEGV 240
>gi|292490814|ref|YP_003526253.1| ribulose-phosphate 3-epimerase [Nitrosococcus halophilus Nc4]
gi|291579409|gb|ADE13866.1| ribulose-phosphate 3-epimerase [Nitrosococcus halophilus Nc4]
Length = 223
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 94/218 (43%), Positives = 139/218 (63%), Gaps = 4/218 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
+I PSIL+ADF+RLGEE++ + AGA +HFDVMD +VPN++ G + +LR + +
Sbjct: 5 KIAPSILSADFARLGEEVTAVLDAGADMVHFDVMDNHYVPNLTIGPLICEALRKHGITAD 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D + A AG + ITFHPE+S HI R+L+ IH G K G+ NP T +
Sbjct: 65 IDVHLMVKPVDRIVPDFAKAGANYITFHPEASEHIDRTLQLIHDEGCKAGLVFNPATSLD 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
L+ V+D++DM+LIM+VNPGFGGQ+ I S + K+++ + +I I LE+DGGV N
Sbjct: 125 YLQYVLDKVDMVLIMSVNPGFGGQKFIPSALDKLQEVRRIIDASSHPIRLEIDGGVKVDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
I+ + AGAD V GS+ F + + + +L K+
Sbjct: 185 IRQIAAAGADTFVAGSAIFQSENYKATIGEMRAELAKA 222
>gi|305664520|ref|YP_003860807.1| ribulose-phosphate 3-epimerase [Maribacter sp. HTCC2170]
gi|88708537|gb|EAR00773.1| ribulose-phosphate 3-epimerase [Maribacter sp. HTCC2170]
Length = 219
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 144/220 (65%), Gaps = 3/220 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PS+LAADF L ++ + + A H D+MDG FVPNIS+G V+++++ +
Sbjct: 1 MSKT-KIAPSLLAADFGNLQRDVEMVNNSEADWHHIDIMDGVFVPNISYGMPVLKAIQKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLMI D +I AD G +++ H E+ H+ RSL+ I A G K GVAINP
Sbjct: 60 ANKPLDVHLMIVDPDRYIKTFADLGASVLSVHYEACNHLHRSLQAIKAEGMKAGVAINPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + +LE+ I++ID++ +M+VNPGFGGQ IE+T K++ KALI K+ + +E+DGGV
Sbjct: 120 TSINLLEETINDIDVVCLMSVNPGFGGQSFIENTYEKVKALKALINKKGANTLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
TS+N KSLV+AGAD+LV GS F K L ++ +
Sbjct: 180 TSKNAKSLVEAGADVLVAGSFVFKSDNPTETIKELKEIAE 219
>gi|322831002|ref|YP_004211029.1| ribulose-phosphate 3-epimerase [Rahnella sp. Y9602]
gi|321166203|gb|ADW71902.1| ribulose-phosphate 3-epimerase [Rahnella sp. Y9602]
Length = 225
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 139/221 (62%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + +AG +HFDVMD +VPN++ G +++SLR+Y
Sbjct: 1 MKQFLIAPSILSADFARLGEDTAKALEAGGDVVHFDVMDNHYVPNLTMGPAILKSLRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A+AG ITFHPE+S H+ RSL+ I + G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRLIPDFAEAGASYITFHPEASEHVDRSLQLIKSHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T ++ LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I + EVDGGV
Sbjct: 121 TSLSYLEYVMDKLDVILLMSVNPGFGGQSFIPGTLDKLRQVRKIIDASGYDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKK 218
+ NI + AGAD+ V GS+ FNQ + + +L K
Sbjct: 181 KADNIGEIAAAGADMFVAGSAIFNQPDYRTVIDHMRSELAK 221
>gi|163868495|ref|YP_001609704.1| ribulose-phosphate 3-epimerase [Bartonella tribocorum CIP 105476]
gi|161018151|emb|CAK01709.1| ribulose-phosphate 3-epimerase [Bartonella tribocorum CIP 105476]
Length = 228
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 112/221 (50%), Positives = 157/221 (71%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ I PS+LA+DFS+LG+EI ++ AGA +H D+MDG FVPNI+FG DVI++LR
Sbjct: 1 MPHSLLISPSLLASDFSKLGQEILDVVDAGADWLHLDIMDGHFVPNITFGPDVIKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++FD HLMI +D ++ A AG DIIT H E+SPH+ RSL+TI AMGKK G+A+NP
Sbjct: 61 TKAIFDVHLMIKPVDLYLEAFAKAGADIITIHAEASPHLHRSLQTIKAMGKKAGIALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFGGQ I KI++ K++I R I LEVDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGGQNFIPEIKDKIKRIKSMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGITAKAGANVFVAGSAIYKNGNKELYKTRMNALRQAAI 221
>gi|118594307|ref|ZP_01551654.1| Ribulose-phosphate 3-epimerase [Methylophilales bacterium HTCC2181]
gi|118440085|gb|EAV46712.1| Ribulose-phosphate 3-epimerase [Methylophilales bacterium HTCC2181]
Length = 232
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 140/228 (61%), Gaps = 9/228 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL+A+F++LG+EI ++ +G +HFDVMD +VPN++ G V ++R
Sbjct: 1 MEKNYRIAPSILSANFAKLGQEIQDVIASGTDFVHFDVMDNHYVPNLTIGPLVCEAIRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+++ D HLM+ +D I A AG DIITFHPE S HI RSL + G K+G+ NP
Sbjct: 61 TEATIDVHLMVKPVDRIIPDFAKAGADIITFHPEGSEHIDRSLSLVRDNGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
T + L+ V+D+IDMIL+M+VNPGFGGQ+ I T+ K+ QA+ I R I LEV
Sbjct: 121 TSLDYLDHVMDKIDMILLMSVNPGFGGQKFIPETLNKLVQARKRIDAYAEKTGRQILLEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQ---KGEISYAKRLNDLKKS 219
DGGV NI+ + +AGAD V GS+ F K Y + L+ +
Sbjct: 181 DGGVNPNNIEEIARAGADTFVAGSAIFGSGNDKDPNRYDTVVKSLRDA 228
>gi|194292436|ref|YP_002008343.1| d-ribulose-5-phosphate 3-epimerase (rubisco operon) [Cupriavidus
taiwanensis LMG 19424]
gi|193226340|emb|CAQ72289.1| D-ribulose-5-phosphate 3-epimerase (RUBISCO operon) [Cupriavidus
taiwanensis LMG 19424]
Length = 233
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 93/224 (41%), Positives = 140/224 (62%), Gaps = 7/224 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
++++ PSIL+ADF+RLGEE+ + GA IHFDVMD +VPN++ G V ++R
Sbjct: 7 RAVRLAPSILSADFARLGEEVCAVEAGGADLIHFDVMDNHYVPNLTIGPMVCEAIRPLVS 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D+ I + A AG II+FHPE+S H+ R++ I G K G+ +NP TP
Sbjct: 67 VPIDVHLMVEPVDALIPLFARAGAGIISFHPEASRHVDRTIGLIRDHGCKAGLVLNPATP 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDG 176
+ L+ + ++D++L+M+VNPGFGGQ I + K+RQ +A I + R + LEVDG
Sbjct: 127 LGWLDHTLAQLDLVLLMSVNPGFGGQAFIPGVLDKVRQVRARIDRQQAAGGREVWLEVDG 186
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKS 219
GV + NI ++ +AGAD V GS+ F + YA L L+++
Sbjct: 187 GVKADNIGAIARAGADTFVAGSAVFGAPDVDGGYAGILRRLREA 230
>gi|297544777|ref|YP_003677079.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842552|gb|ADH61068.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 216
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 143/217 (65%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+A+F+ L E++ I K A +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKIAPSILSANFANLLEDVKKIEK-DADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSIP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I ++G DIIT H E+ H+ R+++ I + GKK GV++NP TP+
Sbjct: 60 FDVHLMIENPDLYIENFVNSGADIITVHQEACIHLHRTIQKIKSYGKKAGVSLNPATPLE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ V+ +IDM+LIMTVNPGFGGQ+ I+S + KI + K + ++ +EVDGG+ N
Sbjct: 120 SIKYVLQDIDMVLIMTVNPGFGGQKFIDSMLKKIEEIKKMREDLGLNFEIEVDGGINLYN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K +V+AG D++V GSS F A+ + + +K+
Sbjct: 180 VKEVVEAGTDIIVAGSSIFESSDP---AQTIKEFRKA 213
>gi|225418649|ref|ZP_03761838.1| hypothetical protein CLOSTASPAR_05873 [Clostridium asparagiforme
DSM 15981]
gi|225041820|gb|EEG52066.1| hypothetical protein CLOSTASPAR_05873 [Clostridium asparagiforme
DSM 15981]
Length = 220
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+LAADF +L E+ + + GA+ +H DVMDG FVP+ISFG VI SLR Y+D VF
Sbjct: 3 ILAPSVLAADFGKLAEDTAKAREGGARYLHLDVMDGAFVPSISFGMPVIASLRGYTDLVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ ++ I AG DIIT H E+ H+ R + I A G K GVA+NP TPV+
Sbjct: 63 DVHMMVEDPGRYVESIRKAGADIITVHQEACTHLDRVIGQIKASGAKAGVALNPATPVST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
LE V+D++DM+L+M+VNPGFGGQ+ I T+ K+R + + + ++VDGGV I
Sbjct: 123 LECVLDQVDMVLVMSVNPGFGGQKFIPYTLDKVRALRQYFDGKGLSTDIQVDGGVNRDTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L++AGA++LV GS+ F + + +N K+
Sbjct: 183 RPLIEAGANVLVAGSAVFGGDVKANVETFMNIFKE 217
>gi|241664339|ref|YP_002982699.1| ribulose-phosphate 3-epimerase [Ralstonia pickettii 12D]
gi|240866366|gb|ACS64027.1| ribulose-phosphate 3-epimerase [Ralstonia pickettii 12D]
Length = 241
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 139/227 (61%), Gaps = 12/227 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS- 63
+I PSIL+ADF+RLGEE+ + ++GA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVLESGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQKD 69
Query: 64 ----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+S +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVSPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDNGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALNKLRAVRQKLDAYQDKTGRKILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKS 219
+DGGV + NI + +AGAD V GS+ F++ + Y + L+++
Sbjct: 190 IDGGVKADNIAEIAKAGADTFVAGSAVFSKPDADGGYRGTVGALRQA 236
>gi|218290483|ref|ZP_03494603.1| Ribulose-phosphate 3-epimerase [Alicyclobacillus acidocaldarius
LAA1]
gi|218239504|gb|EED06699.1| Ribulose-phosphate 3-epimerase [Alicyclobacillus acidocaldarius
LAA1]
Length = 217
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 140/217 (64%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL++DF+RL +E+ + +AG IH DVMDG FVPN++ G ++++LR + + F
Sbjct: 1 MIAPSILSSDFARLRDEVDEVIRAGCDWIHIDVMDGHFVPNLTLGPPIVKALRRHVQATF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ S + I DAG DI+T H E++PH+ R+L+ I G+K G+A+NP T
Sbjct: 61 DVHLMVESPERWIPAFVDAGADILTVHYEATPHVHRALQMIRESGRKAGLALNPGTSPDG 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG---KRSISLEVDGGVTSRN 182
L ++ ++D++L+MTVNPG+GGQ L+ ST+ K+ + + ++ ++ + +EVDGG+ +
Sbjct: 121 LSYLLADVDLVLVMTVNPGYGGQSLVPSTLAKVAEVRRMLDDAGRQDVHVEVDGGIHAGT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKK 218
I+ AGAD+ V GS+ F++ + L L++
Sbjct: 181 IRQARDAGADVFVAGSAVFDELDRAGAIEALRAALRE 217
>gi|145347492|ref|XP_001418198.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578427|gb|ABO96491.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 265
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 144/221 (65%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
SI + PSIL+A+F++LGEEI I KAGA+ +H DVMDG FVPNI+ G V+ ++R +
Sbjct: 42 KNSIIVSPSILSANFAKLGEEIQAIDKAGAEWVHVDVMDGRFVPNITIGPLVVDAIRPVT 101
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D V DCHLMI + + A AG DII+ H E ++ H+ R++ I +G K GV +NP
Sbjct: 102 DKVLDCHLMIVEPELRVADFAKAGADIISVHAEGAATIHLHRTINQIKDLGCKAGVVLNP 161
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TPV +LE +I+E+D+IL+M+VNPGFGGQ IES + KI Q K + + ++ +EVDGG
Sbjct: 162 GTPVNVLEYIIEEVDLILVMSVNPGFGGQSFIESQVEKIAQIKKMCVAKGVNPWIEVDGG 221
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V+ N +++AGA+ LV GS+ FN + + K+
Sbjct: 222 VSPANAYKVIEAGANALVAGSAVFNSPDYAAAIAGIKASKR 262
>gi|240850727|ref|YP_002972127.1| pentose (ribulose)-5-phosphate-3-epimerase Rpe [Bartonella grahamii
as4aup]
gi|240267850|gb|ACS51438.1| pentose (ribulose)-5-phosphate-3-epimerase Rpe [Bartonella grahamii
as4aup]
Length = 228
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 107/221 (48%), Positives = 155/221 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS+LA+DFS+LG+E+ ++ AGA +H D+MDG FVPNI+FG +++++LR
Sbjct: 1 MPHSHLISPSLLASDFSKLGQEMLDVVDAGADWLHLDIMDGHFVPNITFGPEIVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD HLMI+ +D ++ A AG DIIT H E+SPH+ RSL+TI MGKK G+A+NP
Sbjct: 61 TKATFDVHLMIAPVDPYLEAFAKAGSDIITIHAEASPHLHRSLQTIKKMGKKAGIALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFGGQ I KI++ K++I R I LEVDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGGQSFIPEIKDKIKRVKSMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGITAKAGANVFVAGSAIYKNGNKELYKTRINALRQAAI 221
>gi|127511153|ref|YP_001092350.1| ribulose-phosphate 3-epimerase [Shewanella loihica PV-4]
gi|126636448|gb|ABO22091.1| ribulose-5-phosphate 3-epimerase [Shewanella loihica PV-4]
Length = 224
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 102/227 (44%), Positives = 142/227 (62%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + KAGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGEDVEAVLKAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I DAG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRIIPDFVDAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ FN+ Y +++++ +D
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNKPD---YKAVIDEMRSELAKVD 223
>gi|300702926|ref|YP_003744527.1| d-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum
CFBP2957]
gi|299070588|emb|CBJ41883.1| D-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum
CFBP2957]
Length = 242
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 139/230 (60%), Gaps = 13/230 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS--- 61
+I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVIEAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHAQRD 69
Query: 62 --DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALTKLRAVRQKLDAYAERTGRRILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSALA 222
+DGGV + NI + +AGAD V GS+ F + + Y + L+ SALA
Sbjct: 190 IDGGVKADNIAEIARAGADTFVAGSAVFGKPDADGGYRGTVGALR-SALA 238
>gi|313905215|ref|ZP_07838583.1| ribulose-phosphate 3-epimerase [Eubacterium cellulosolvens 6]
gi|313469968|gb|EFR65302.1| ribulose-phosphate 3-epimerase [Eubacterium cellulosolvens 6]
Length = 225
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 138/214 (64%), Gaps = 3/214 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P ++ PSIL+ADF++LGE++ + +AG +H DVMDG FVP +SFG V++SLR
Sbjct: 1 MKPVYRLSPSILSADFAKLGEQVKELGEAGVPWVHIDVMDGQFVPPVSFGDPVVKSLRKV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D FD HLM+ I +AG D++T H E+ H+ R+L+ IH G K GVA+NP
Sbjct: 61 TDLFFDVHLMVVEPARFIEDYKNAGADLMTVHAEACGHLDRTLQAIHDAGMKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGG 177
TP+ +L+ V+D++DM+LIM+VNPG+GGQ+ I + KIR + + + ++VDGG
Sbjct: 121 TPLNVLDYVMDKLDMVLIMSVNPGYGGQKFIPGMVQKIRDLRKKLDEAGYENVPIQVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ + I S++ AGA ++V GS+ F + + A
Sbjct: 181 INTDTIDSVLDAGASVIVAGSAVFGGDIQKNAAA 214
>gi|83747478|ref|ZP_00944516.1| Ribulose-phosphate 3-epimerase [Ralstonia solanacearum UW551]
gi|207721759|ref|YP_002252197.1| ribulose-phosphate 3-epimerase protein [Ralstonia solanacearum
MolK2]
gi|207744437|ref|YP_002260829.1| ribulose-phosphate 3-epimerase protein [Ralstonia solanacearum
IPO1609]
gi|83725792|gb|EAP72932.1| Ribulose-phosphate 3-epimerase [Ralstonia solanacearum UW551]
gi|206586923|emb|CAQ17507.1| ribulose-phosphate 3-epimerase protein [Ralstonia solanacearum
MolK2]
gi|206595843|emb|CAQ62770.1| ribulose-phosphate 3-epimerase protein [Ralstonia solanacearum
IPO1609]
Length = 242
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 139/230 (60%), Gaps = 13/230 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS--- 61
+I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVIEAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHAQRD 69
Query: 62 --DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALSKLRAVRQKLDAYADQTGRRILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSALA 222
+DGGV + NI + +AGAD V GS+ F + + Y + L+ SALA
Sbjct: 190 IDGGVKADNIAEIARAGADTFVAGSAVFGKPDADGGYRGTVGALR-SALA 238
>gi|257466330|ref|ZP_05630641.1| ribulose-phosphate 3-epimerase [Fusobacterium gonidiaformans ATCC
25563]
gi|315917487|ref|ZP_07913727.1| ribulose-phosphate 3-epimerase [Fusobacterium gonidiaformans ATCC
25563]
gi|313691362|gb|EFS28197.1| ribulose-phosphate 3-epimerase [Fusobacterium gonidiaformans ATCC
25563]
Length = 212
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 6/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DFSRLGEEI I +A A IH DVMDG FVPN++FG +I+S+R Y++
Sbjct: 2 EIKIAPSILSSDFSRLGEEIVAIDQAKADYIHIDVMDGIFVPNLTFGPPIIKSIRKYTNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI + +I AG DIIT H ES+ H+ R ++ I A G K V++NP T
Sbjct: 62 IFDVHLMIDKPERYIEDYVKAGADIITVHAESTIHLHRVIQQIKAFGVKAAVSLNPSTSE 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+L+ VI ++DM+L+M+VNPGFGGQ+ I + + KI+ +A+ I +EVDGG+T I
Sbjct: 122 EVLKYVIQDLDMVLVMSVNPGFGGQKFIPAVVDKIKAIRAMRE--DIEIEVDGGITDATI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+S ++AGA V GS F+ +YA+R+ +LK
Sbjct: 180 QSCIEAGATTFVAGSYVFSG----NYAERIANLKN 210
>gi|240137500|ref|YP_002961971.1| D-ribulose-5-phosphate 3-epimerase [Methylobacterium extorquens
AM1]
gi|240007468|gb|ACS38694.1| D-ribulose-5-phosphate 3-epimerase [Methylobacterium extorquens
AM1]
Length = 227
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 109/217 (50%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 4 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP + +
Sbjct: 64 VHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E ++D +D++L+MTVNPGFGGQ I S++ + + KA+ RSI + VDGG+T
Sbjct: 124 EPLLDMVDLVLVMTVNPGFGGQSFIHSSLETVARVKAMTAGRSIDISVDGGITPETAGPA 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
QAGA++LV GS+ F G Y K + ++++A +
Sbjct: 184 AQAGANILVAGSAAFKG-GATQYEKNVAAIREAAQSA 219
>gi|294628318|ref|ZP_06706878.1| ribulose-phosphate 3-epimerase [Streptomyces sp. e14]
gi|292831651|gb|EFF90000.1| ribulose-phosphate 3-epimerase [Streptomyces sp. e14]
Length = 228
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEDPDRWAPQYVEAGASSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
ED++ E+DM+L+MTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLVMTVEPGFGGQAFLDIMLPKIRRTRELIAKHGLQLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ +AGAD+ V GS+ + + + L
Sbjct: 180 TIERCAEAGADVFVAGSAVYGAENPAEAVRALR 212
>gi|21219966|ref|NP_625745.1| ribulose-phosphate 3-epimerase [Streptomyces coelicolor A3(2)]
gi|256788934|ref|ZP_05527365.1| ribulose-phosphate 3-epimerase [Streptomyces lividans TK24]
gi|289772822|ref|ZP_06532200.1| ribulose-phosphate 3-epimerase [Streptomyces lividans TK24]
gi|18203210|sp|Q9L0Z5|RPE_STRCO RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|7209224|emb|CAB76886.1| ribulose-phosphate 3-epimerase [Streptomyces coelicolor A3(2)]
gi|289703021|gb|EFD70450.1| ribulose-phosphate 3-epimerase [Streptomyces lividans TK24]
Length = 228
Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 129/221 (58%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELIKKHGLELWLQVDGGVSAA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ AGAD+ V GS+ + + L +A A
Sbjct: 180 TIERCADAGADVFVAGSAVYGASDPAEAVRALRTQADAATA 220
>gi|293393372|ref|ZP_06637684.1| ribulose-phosphate 3-epimerase [Serratia odorifera DSM 4582]
gi|291424109|gb|EFE97326.1| ribulose-phosphate 3-epimerase [Serratia odorifera DSM 4582]
Length = 225
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 139/221 (62%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ +N+ AGA +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTANVLTAGADVVHFDVMDNHYVPNLTIGPMVCQALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG I+FHPE+S H+ R+++ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASYISFHPEASEHVDRTIQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ V+D+ID+IL+M+VNPGFGGQ I T+ K+RQ + LI R I LEVDGGV
Sbjct: 121 TPLSYLDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDSGRDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKK 218
NI + AGAD+ V GS+ F + + + +L K
Sbjct: 181 KVDNIAEIAAAGADMFVAGSAIFGKPDYRAVIDEMRSELAK 221
>gi|229826172|ref|ZP_04452241.1| hypothetical protein GCWU000182_01544 [Abiotrophia defectiva ATCC
49176]
gi|229789042|gb|EEP25156.1| hypothetical protein GCWU000182_01544 [Abiotrophia defectiva ATCC
49176]
Length = 224
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PSILAADF +L E+I + GAK +H DVMDG FVP+ISFG VI+SLR YS
Sbjct: 2 EYILSPSILAADFGKLAEQIKITEENGAKYLHLDVMDGAFVPSISFGMPVIKSLRKYSGQ 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI S + ++ AG DIIT H E++ H+ R++ I +G K GV++NP TP+
Sbjct: 62 VFDVHLMIESPERYLEDFKAAGADIITVHAEATKHLHRTVTRIKELGLKAGVSLNPATPL 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +E V+ E+DM+LIM+VNPGFGGQ+ I T+ KIR+ + + I +EVDGGV N+
Sbjct: 122 SAIELVLSEVDMVLIMSVNPGFGGQKFIPFTLDKIRKLREM--SPDIDIEVDGGVNKDNV 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGA++LV G++ F + + +
Sbjct: 180 AELVKAGANVLVAGTAVFGGDIAENTKLMIERM 212
>gi|308273502|emb|CBX30104.1| Ribulose-phosphate 3-epimerase [uncultured Desulfobacterium sp.]
Length = 218
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 137/214 (64%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFS LGEEI ++ KAGA IH DVMDG FVPNI+ GA V+++++ + D
Sbjct: 4 IAPSILSADFSILGEEIKSVEKAGADWIHVDVMDGHFVPNITMGALVVKAVKPVTTLPVD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D+ I A AG I+ E+ H+ R+++ I G K GVA+NP TP++ +
Sbjct: 64 VHLMIENADNFIPDFAKAGASFISVQVETCTHLNRTVQLIREHGVKAGVALNPSTPLSAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E V++ ID +L+MTVNPGFGGQ I +++ KI+ +I ++ +S ++VDGG+ I
Sbjct: 124 EWVLEYIDFVLVMTVNPGFGGQAFINNSLTKIKTLDRIIKEQGLSTLIQVDGGINKETIG 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGAD+ V GS+ F Y + ++ LKK
Sbjct: 184 EVSVAGADIFVAGSAIFGSNN---YKETIDLLKK 214
>gi|163803108|ref|ZP_02196992.1| ribulose-phosphate 3-epimerase [Vibrio sp. AND4]
gi|159173100|gb|EDP57932.1| ribulose-phosphate 3-epimerase [Vibrio sp. AND4]
Length = 223
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 98/217 (45%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+A LE +ID++DMIL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLAHLEFIIDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + +AGAD+ V GS+ F++ +
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFSEPDYKQVIDNMRA 217
>gi|170767071|ref|ZP_02901524.1| ribulose-phosphate 3-epimerase [Escherichia albertii TW07627]
gi|170124509|gb|EDS93440.1| ribulose-phosphate 3-epimerase [Escherichia albertii TW07627]
Length = 225
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+A+ I + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREARRRIDDSGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|82778799|ref|YP_405148.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae Sd197]
gi|309785876|ref|ZP_07680507.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 1617]
gi|81242947|gb|ABB63657.1| D-ribulose-5-phosphate 3-epimerase [Shigella dysenteriae Sd197]
gi|308926996|gb|EFP72472.1| ribulose-phosphate 3-epimerase [Shigella dysenteriae 1617]
Length = 225
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 139/214 (64%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SL +Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLCNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F+Q Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKVIDEMR 216
>gi|256392291|ref|YP_003113855.1| ribulose-phosphate 3-epimerase [Catenulispora acidiphila DSM 44928]
gi|256358517|gb|ACU72014.1| ribulose-phosphate 3-epimerase [Catenulispora acidiphila DSM 44928]
Length = 231
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 133/223 (59%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S+QI PSIL+ADF+RL +E+ + A IH DVMD FVPN++ G V+ +L S
Sbjct: 8 MSSVQISPSILSADFARLADEVGAVPS--ADWIHVDVMDNHFVPNLTLGLPVVEALVKAS 65
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
DCHLMI+ D A+ G +TFH E++ R R++ + G + G+A+ P T
Sbjct: 66 PRPLDCHLMIADPDRWAPGYAEVGAGSVTFHVEAARAPIRLARSLRSAGARAGMALKPAT 125
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
P+ ED++ E+DM+L+MTV PGFGGQ+ ++ +PKIR+ + +I + + L++DGGV
Sbjct: 126 PIEPYEDLLGELDMVLLMTVEPGFGGQKFLDVVLPKIRRTRQMINRHGGSVWLQIDGGVA 185
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I+ +AGAD+ V GS+ + + + L ++A A
Sbjct: 186 ADTIERCAEAGADVFVAGSAVYGAEDPDRAIQALRAQAEAAGA 228
>gi|119776494|ref|YP_929234.1| ribulose-phosphate 3-epimerase [Shewanella amazonensis SB2B]
gi|119768994|gb|ABM01565.1| ribulose-5-phosphate 3-epimerase [Shewanella amazonensis SB2B]
Length = 230
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 140/224 (62%), Gaps = 5/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 7 MRPYL-IAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 65
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 66 GITADIDVHLMVKPVDRIIPDFAKAGASIITFHPEASEHVDRTLQLIRDHGCKAGLVFNP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K++Q + I + EVDGG
Sbjct: 126 ATPLHYLDYVMDKLDVILLMSVNPGFGGQSFIPATLDKLKQVRGRIDASGYDIRLEVDGG 185
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
V NI + AGAD+ V GS+ F + + R+ +L K A
Sbjct: 186 VKEDNIAEIAAAGADMFVAGSAIFGKPDYKAVVDRMRAELAKVA 229
>gi|299141007|ref|ZP_07034145.1| ribulose-phosphate 3-epimerase [Prevotella oris C735]
gi|298577973|gb|EFI49841.1| ribulose-phosphate 3-epimerase [Prevotella oris C735]
Length = 217
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L +EI I + A +H D+MDG FVPNISFG V+ ++ D
Sbjct: 5 VSPSLLAADFLNLKDEIEMINNSQADWLHMDIMDGVFVPNISFGFPVLEAVSKVCKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV++L
Sbjct: 65 VHFMIVHPEQYIEQTAKLGAMMMNVHYETCTHLHRTIQQIHAAGMKAGVTLNPSTPVSML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE+TI K+++ + +I +E+DGGV
Sbjct: 125 EDIIYDVDMVLLMSVNPGFGGQKFIENTIRKVKRLRKMIDDAGTHTLIEIDGGVQDETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV GS F + + L L
Sbjct: 185 RLVKAGADVLVSGSYVFKSADPHATIEALKKL 216
>gi|89075213|ref|ZP_01161644.1| putative ribulose-phosphate 3-epimerase [Photobacterium sp. SKA34]
gi|89049035|gb|EAR54602.1| putative ribulose-phosphate 3-epimerase [Photobacterium sp. SKA34]
Length = 224
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 142/222 (63%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLGE++ + AGA IHFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKNFLIAPSILSADFARLGEDVDKVLAAGADVIHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGATMITFHVEASDHVDRTLQLIKENGCKAGVVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++DMIL+M+VNPGFGGQ I ST+ K+R+ + I R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDMILLMSVNPGFGGQSFIPSTLDKLREVRKRIDASGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
NI+ + AGAD+ V GS+ FN+ ++ +L ++
Sbjct: 181 KVDNIREIAAAGADMFVAGSAIFNEPDYKVAIDKMRAELAEA 222
>gi|306828030|ref|ZP_07461295.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes ATCC 10782]
gi|304429746|gb|EFM32790.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes ATCC 10782]
Length = 220
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP T
Sbjct: 61 RLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P LE ++D +D +LIMTVNPGFGGQ I + K+ ++ + +EVDGGV
Sbjct: 121 PATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ I++ +AGA++ V GS F +S + L
Sbjct: 181 NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215
>gi|229495425|ref|ZP_04389160.1| ribulose-phosphate 3-epimerase [Porphyromonas endodontalis ATCC
35406]
gi|229317868|gb|EEN83766.1| ribulose-phosphate 3-epimerase [Porphyromonas endodontalis ATCC
35406]
Length = 218
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 129/218 (59%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P + PS+L+ADF L E + I ++ A +H DVMDG FVPN+SFG ++ ++
Sbjct: 1 MSP--IVSPSLLSADFLHLEESVKMINQSNADWLHIDVMDGVFVPNLSFGFPILEAISPI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI I +A G I+ H E SPH+ RSL I A G K+GV +NP
Sbjct: 59 CRKPLDVHLMIVDPLKFIEPLAKVGTHIMNIHYEVSPHLHRSLTAIRAAGMKSGVTLNPH 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LEDV++E D++L+M+VNPGFGGQ+ I T+ K R+ + +I +R + LEVDGGV
Sbjct: 119 TPVEVLEDVLEECDLVLLMSVNPGFGGQKFIHRTLEKTRRLRRMIDERGLETILEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+AGAD LV GS F L L
Sbjct: 179 NATTAPLLVEAGADALVAGSYVFGHAHPFEAIDGLKAL 216
>gi|289422334|ref|ZP_06424184.1| ribulose-phosphate 3-epimerase [Peptostreptococcus anaerobius
653-L]
gi|289157279|gb|EFD05894.1| ribulose-phosphate 3-epimerase [Peptostreptococcus anaerobius
653-L]
Length = 219
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 102/218 (46%), Positives = 149/218 (68%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+A+F+ L + AG + +H DVMDG +VPNI+FG VI+SLR D V
Sbjct: 2 IKLAPSILSANFAELLADCKKAQDAGCEYLHLDVMDGHYVPNITFGPAVIKSLRKDIDMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+ D++++ +ADAGCDI+T H E+ H+ R+++ I + G K GV +NP TPV
Sbjct: 62 FDAHLMITDPDAYMDALADAGCDIVTVHQEACTHLHRTIQNIKSHGMKAGVVLNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+ ++DM+L+M+VNPGFGGQ I TI KI++ K++I +R I +EVDGGV + N
Sbjct: 122 TIKHVLCDVDMVLLMSVNPGFGGQAFIPETINKIKELKSMIDERGLEIDIEVDGGVKASN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK +V AGA+++V GSS F K + DL+ +A
Sbjct: 182 IKEVVDAGANIIVGGSSIFGHDD---INKAVEDLRNAA 216
>gi|224035937|gb|ACN37044.1| unknown [Zea mays]
Length = 274
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 139/222 (62%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LG+++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 48 KSDIIVSPSILSANFAKLGDQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 107
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 108 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTSTIHLHRTVNQIKSLGAKAGVVLNP 167
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++ ++D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGG
Sbjct: 168 ATPLNAIDYILDVVDLVLIMSVNPGFGGQSFIESQVRKIAELRRLCAEKGVNPWIEVDGG 227
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V +N +++AGA+ +V GS+ F YA+ + +K S
Sbjct: 228 VGPKNAYKVIEAGANAIVAGSAVFGAPD---YAEAIKGIKTS 266
>gi|156972404|ref|YP_001443311.1| ribulose-phosphate 3-epimerase [Vibrio harveyi ATCC BAA-1116]
gi|156523998|gb|ABU69084.1| hypothetical protein VIBHAR_00024 [Vibrio harveyi ATCC BAA-1116]
Length = 223
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+A LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I + R I LE+DGGV
Sbjct: 121 TPLAHLEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + +AGAD+ V GS+ F++ ++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFSEPDYKQVIDKMRA 217
>gi|284033031|ref|YP_003382962.1| ribulose-phosphate 3-epimerase [Kribbella flavida DSM 17836]
gi|283812324|gb|ADB34163.1| ribulose-phosphate 3-epimerase [Kribbella flavida DSM 17836]
Length = 222
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 85/221 (38%), Positives = 130/221 (58%), Gaps = 4/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL+ADF+ L +E + + + A +H DVMD FVPN++ G V+ SL +
Sbjct: 3 IQIAPSILSADFANLADEAAAV--SNADWLHVDVMDNHFVPNLTLGLPVVESLAKAAAQP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D +AG +TFH E+ R+ R I A G + +A+ P TP+
Sbjct: 61 LDCHLMIEDPDRWAPGYVEAGASSVTFHAEACRAPIRTAREIRAKGARASMALKPATPIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
ED++ E+DMILIMTV PGFGGQ+ ++ +PKIR+ + L+ + + +++DGGV++
Sbjct: 121 PYEDLLPELDMILIMTVEPGFGGQKFLDVCVPKIRRTRQLLDQHGLELWIQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD+ V GS+ + + +L L ++A
Sbjct: 181 IERCAEAGADVFVAGSAVYAADDPNTMVDKLRTLAENARTA 221
>gi|84619192|emb|CAJ42316.1| putative ribulose-phosphate 3-epimerase [Streptomyces
steffisburgensis]
Length = 228
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 92/222 (41%), Positives = 133/222 (59%), Gaps = 7/222 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AVQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ AGAD+ V GS+ + A+ + L+ A AI
Sbjct: 180 TIERCADAGADVFVAGSAVYGANDP---AEAVRALRTQAEAI 218
>gi|93006818|ref|YP_581255.1| ribulose-phosphate 3-epimerase [Psychrobacter cryohalolentis K5]
gi|92394496|gb|ABE75771.1| ribulose-5-phosphate 3-epimerase [Psychrobacter cryohalolentis K5]
Length = 229
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 103/224 (45%), Positives = 150/224 (66%), Gaps = 5/224 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF++LGEE+ + +GA IHFDVMD +VPN++FG+ + ++LR Y
Sbjct: 5 SKPYLIAPSILSADFAKLGEEVERVLASGADVIHFDVMDNHYVPNLTFGSMICKALRDYG 64
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D+ D HLM+S +DS I +AG IITFHPE+S HI RSL+ I G + G+ +NP
Sbjct: 65 IDAPIDVHLMVSPVDSMIEQFLEAGASIITFHPEASSHIDRSLQLIKDGGAECGLVLNPA 124
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGV 178
TP+ L+ V+D++D +L+M+VNPG+GGQ IE T+ K+RQ + I R I LEVDGG+
Sbjct: 125 TPLHYLDYVMDKVDQVLLMSVNPGYGGQSFIEGTLEKVRQVRQRIITSGRDIRLEVDGGI 184
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ NI+++ +AGAD+ V GS+ FNQ+ + + + ALA
Sbjct: 185 KASNIRAIAEAGADMFVAGSAIFNQEDYKAAIDAMR--AELALA 226
>gi|304383969|ref|ZP_07366425.1| ribulose-phosphate 3-epimerase [Prevotella marshii DSM 16973]
gi|304334861|gb|EFM01135.1| ribulose-phosphate 3-epimerase [Prevotella marshii DSM 16973]
Length = 218
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF RL EI I ++ A +H DVMDG FVPNISFG V+ ++ D
Sbjct: 5 ISPSLLSADFLRLESEIDMINRSEADWLHLDVMDGVFVPNISFGFPVMEAVSKQCKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IH+ G + GVA+NP TPV L
Sbjct: 65 VHFMIVHPEHYIAQTAKLGAMMMCVHAEACTHLHRTVQEIHSAGMRAGVALNPATPVVSL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED++ ++DM+L+M+VNPGFGGQQ IE+TI KI + + LI ++ +EVDGGV
Sbjct: 125 EDIVKDVDMVLLMSVNPGFGGQQFIENTIEKIGRLRELIHQKGSHALIEVDGGVQEETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV+AGAD+LV GS F + +L L++
Sbjct: 185 RLVKAGADVLVSGSYLFRSADPAATISKLKHLER 218
>gi|152980493|ref|YP_001351927.1| D-ribulose-5-phosphate 3-epimerase [Janthinobacterium sp.
Marseille]
gi|151280570|gb|ABR88980.1| D-ribulose-5-phosphate 3-epimerase [Janthinobacterium sp.
Marseille]
Length = 221
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 140/220 (63%), Gaps = 3/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MPNYRIAPSILSADFARLGEEVCNVVAAGADIIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ +D I A AG +IITFHPE+S HI R+L+ I G K G+ NP T
Sbjct: 61 QVPIDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRTLQLIRDNGCKAGLVFNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ LE V+D++D+IL+M+VNPGFGGQ I T+ KI + +I + R I LEVDGG+
Sbjct: 121 PLNHLEHVMDKLDIILMMSVNPGFGGQSFIPHTLKKIAAVRKMIDESGRDIMLEVDGGIK 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKK 218
NI++ +AGAD V GS+ F + + + +L K
Sbjct: 181 IDNIEAAARAGADTFVAGSAIFGKPDYKAVIDAMRSELAK 220
>gi|21909728|ref|NP_663996.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes MGAS315]
gi|28895109|ref|NP_801459.1| ribulose-phosphate 3-epimerase [Streptococcus pyogenes SSI-1]
gi|21903912|gb|AAM78799.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes
MGAS315]
gi|28810354|dbj|BAC63292.1| putative ribulose-phosphate 3-epimerase [Streptococcus pyogenes
SSI-1]
Length = 220
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSILAAD++ E++ I + A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P LE ++D +D +LIMTVNPGFGGQ I + K+ ++ + +EVDGGV
Sbjct: 121 PATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ I++ +AGA++ V GS F +S + L
Sbjct: 181 NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLR 215
>gi|171462973|ref|YP_001797086.1| Ribulose-phosphate 3-epimerase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192511|gb|ACB43472.1| Ribulose-phosphate 3-epimerase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 241
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 135/225 (60%), Gaps = 11/225 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+ LG+E+ ++ AGA IHFDVMD +VPN++ G V ++R Y+
Sbjct: 9 NNQFVIAPSILSADFACLGKEVQDVLVAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPYA 68
Query: 62 -----DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
+V D HLMI +D + A AG + I+FHPE+SPH+ R+L I G + G+
Sbjct: 69 NKDGKPTVIDVHLMIEPVDRIVPDFAKAGANFISFHPEASPHVNRTLNLIRDQGCQAGLV 128
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSI 170
+NP TP+ L+ ++ ID++L+M+VNPGFGGQ I ST+ KI Q +A + + R I
Sbjct: 129 LNPATPLDHLDHTLELIDLVLLMSVNPGFGGQSFISSTLNKIAQVRARLDRYQAETGRHI 188
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
LEVDGG+ NI + +AGAD V GS+ + ++ +
Sbjct: 189 RLEVDGGIKVDNIAEVAKAGADTFVAGSAIYGKENYADVITTMRA 233
>gi|159465721|ref|XP_001691071.1| ribulose phosphate-3-epimerase, chloroplast precursor
[Chlamydomonas reinhardtii]
gi|158279757|gb|EDP05517.1| ribulose phosphate-3-epimerase, chloroplast precursor
[Chlamydomonas reinhardtii]
Length = 265
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+ADFSRLG+E+ I +AG +H DVMDG FVPNI+ G V+ +LR +
Sbjct: 39 KSDIIVSPSILSADFSRLGDEVRAIDQAGCDWVHIDVMDGRFVPNITIGPLVVEALRPVT 98
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D V D HLMI + I A AG DII+ H E S+ H+ R+L + +G K GV +NP
Sbjct: 99 DKVLDVHLMIVEPELRIPDFAKAGADIISVHAEQSSTIHLHRTLNMVKDLGCKAGVVLNP 158
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
T ++ +E+V+D +D+ILIM+VNPGFGGQ+ IES + KIR K + ++ ++ +EVDGG
Sbjct: 159 GTSLSTIEEVLDVVDLILIMSVNPGFGGQKFIESQVAKIRNLKRMCNEKGVNPWIEVDGG 218
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
VT N ++ AGA+ LV GS+ F K + K A
Sbjct: 219 VTPENAYKVIDAGANALVAGSAVFKAKSYRDAIHGIKVSKAPA 261
>gi|126733779|ref|ZP_01749526.1| ribulose-5-phosphate 3-epimerase [Roseobacter sp. CCS2]
gi|126716645|gb|EBA13509.1| ribulose-5-phosphate 3-epimerase [Roseobacter sp. CCS2]
Length = 227
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 132/208 (63%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G E I GA +H DVMDG FVPNI+FG ++R +
Sbjct: 5 RSIKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPATCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI+ +D +I A AG D+IT H E+ PHI R+L+ I G K GVA+NP TP
Sbjct: 65 GVMDVHLMIAPVDPYIEGFAKAGADVITAHVEAGPHIHRTLQAIRGAGAKAGVALNPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
A +E ++D +D++ +MTVNPGFGGQ+ I S I K+R+ +A+IG R I +E+DGGV
Sbjct: 125 AASVEMLLDMVDLVCVMTVNPGFGGQKFIYSQIEKVRELRAMIGDRPIHIEIDGGVDPAT 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ AGAD+LV GS+ F A
Sbjct: 185 APLVAAAGADVLVAGSAVFRGGSVTDPA 212
>gi|182678010|ref|YP_001832156.1| ribulose-phosphate 3-epimerase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633893|gb|ACB94667.1| Ribulose-phosphate 3-epimerase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 225
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 104/221 (47%), Positives = 150/221 (67%), Gaps = 2/221 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF++LGEE+ I +AGA +H DVMDG FVPNI+ G ++ +LR +
Sbjct: 1 MNP-LAIAPSILSADFAKLGEEVKAIAEAGADWVHVDVMDGHFVPNITIGPAIVAALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMI+ D ++ A+AG D+I+ H E+ PH+ RSL+ I A+GK+ GV +NP
Sbjct: 60 TSLCFDVHLMIAPCDPYLAAFAEAGADLISVHAEAGPHLHRSLQAIKALGKQAGVVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPVA + V+D +D++L+M+VNPGFGGQ I S I K+ + + LIG+R I +EVDGG+
Sbjct: 120 TPVAHVAHVLDLVDLVLVMSVNPGFGGQAFIPSAIGKVAELRQLIGERPIRIEVDGGINP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +V+AGAD LV GS+ F G Y + +++ AL
Sbjct: 180 ETARQVVEAGADTLVAGSAVFKG-GPDHYRTNIANIRAGAL 219
>gi|27364780|ref|NP_760308.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus CMCP6]
gi|37681169|ref|NP_935778.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus YJ016]
gi|320155174|ref|YP_004187553.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus MO6-24/O]
gi|27360925|gb|AAO09835.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus CMCP6]
gi|37199920|dbj|BAC95749.1| pentose-5-phosphate-3-epimerase [Vibrio vulnificus YJ016]
gi|319930486|gb|ADV85350.1| ribulose-phosphate 3-epimerase [Vibrio vulnificus MO6-24/O]
Length = 222
Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 142/222 (63%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA V ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPVCKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHIEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+A LE ++D++D+IL+M+VNPGFGGQ I T+ K+R + +I R I LE+DGGV
Sbjct: 121 TPLAHLEFIMDKVDLILLMSVNPGFGGQSFIPHTLDKLRAVRKMIDATGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
NI+ + +AGAD+ V GS+ F Q + + +L K+
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIFGQPDYKAVIDEMRAELAKA 222
>gi|319898863|ref|YP_004158956.1| ribulose-phosphate 3-epimerase [Bartonella clarridgeiae 73]
gi|319402827|emb|CBI76378.1| ribulose-phosphate 3-epimerase [Bartonella clarridgeiae 73]
Length = 224
Score = 273 bits (700), Expect = 8e-72, Method: Composition-based stats.
Identities = 112/221 (50%), Positives = 154/221 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+LA+DFS+LG+E+S++ AGA IH D+MDG FVPNI+FG DV+++LR
Sbjct: 1 MSRSHLIAPSLLASDFSKLGQELSDVIDAGADWIHLDIMDGHFVPNITFGPDVVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFD HLMI+ +D +I A G DIIT H ESS H+ RSL+ I AMGKK G+A+NP
Sbjct: 61 TKAVFDVHLMIAPVDPYIEAFAKVGSDIITIHAESSTHLHRSLQIIKAMGKKAGIAVNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T ILE ++D++D+ILIMTVNPGFGGQ I KI++ K +I R I LEVDGG+T
Sbjct: 121 TSEHILEYLLDQLDLILIMTVNPGFGGQSFILEMEDKIKRVKNMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R+N L+++A+
Sbjct: 181 DTIGKTAKAGANVFVAGSAIYKNGNKNLYKTRINALRQAAI 221
>gi|326693792|ref|ZP_08230797.1| ribulose-phosphate 3-epimerase [Leuconostoc argentinum KCTC 3773]
Length = 218
Score = 273 bits (700), Expect = 8e-72, Method: Composition-based stats.
Identities = 91/217 (41%), Positives = 138/217 (63%), Gaps = 2/217 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+AD++ L ++ + AGA+ +H DVMDG FVP+IS+G + ++ LR +D
Sbjct: 2 SEIIAPSILSADYTNLERDVKLVEAAGAEYLHIDVMDGNFVPSISYGPNWVKQLRPETDM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLM+++ + ++ ADAG DII H E++PHI R+L+ I G K V INP TPV
Sbjct: 62 VLDVHLMVTNPEKIVDEFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+E V+D +D +L+MTVNPGFGGQ+ + ST+ KI Q +A+ + ++VDGG+
Sbjct: 122 LAIEPVLDMVDQVLVMTVNPGFGGQKFLPSTLEKIAQLRAVRDELGYDFDIQVDGGINDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + +AGA++ V GS +++ + RL L K
Sbjct: 182 TVVAAYEAGANVFVAGSYVYDKVDPAAKIARLKALTK 218
>gi|209521278|ref|ZP_03269997.1| Ribulose-phosphate 3-epimerase [Burkholderia sp. H160]
gi|209498285|gb|EDZ98421.1| Ribulose-phosphate 3-epimerase [Burkholderia sp. H160]
Length = 235
Score = 273 bits (700), Expect = 8e-72, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 142/229 (62%), Gaps = 9/229 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+ADF+RL +EI ++T AGA IH DVMD +VPN++ G V ++R Y+
Sbjct: 1 MREFLIAPSLLSADFARLADEIRDVTAAGADWIHLDVMDNHYVPNLTVGPLVCSAIRPYT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLM + +D + A+AG ++I+FHPE++ H+ R++ I + G + G+A+NP T
Sbjct: 61 SLPFDVHLMTTPVDPLVTAFAEAGANLISFHPEATLHVHRTIELIRSHGARAGLALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG------KRSISLEVD 175
P+A+L+ V++ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVD
Sbjct: 121 PLAVLDHVLEMLDVVLVMSVNPGFGGQAFIAETLDKLRLLRERVDTTMQRTGRPLLIEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
GG+ + NI + AGAD+ V GS+ F A+ + ++ +D
Sbjct: 181 GGLKASNIARVATAGADVFVAGSAVFGASDR---AQAIRAMRGELATVD 226
>gi|239626551|ref|ZP_04669582.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47_FAA]
gi|239516697|gb|EEQ56563.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47FAA]
Length = 220
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 141/211 (66%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSILAADF LG ++ + +AGA+ IH DVMDG FVP+ISFG VI+SLRS +D+VF
Sbjct: 4 KLAPSILAADFGNLGAQVRTVAQAGAEYIHLDVMDGAFVPSISFGMPVIKSLRSCTDAVF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ ++ + G DIIT H E+ H+ R + I +G K GVA+NP TP+
Sbjct: 64 DVHMMVEEPGRYVEDMKACGADIITVHAEACTHLDRVVNQIKELGLKAGVALNPATPIQA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ ++D++DM+LIMTVNPGFGGQ+ I T+ K+R +A I + + ++VDGGV++RN+
Sbjct: 124 LDCILDQLDMVLIMTVNPGFGGQKFIPYTLDKVRGLRARIDQLGLPVDIQVDGGVSARNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K ++ AGA++ V GS+ F + L
Sbjct: 184 KEIMDAGANVFVAGSAVFGGDAAARTKEFLE 214
>gi|226494111|ref|NP_001142197.1| hypothetical protein LOC100274365 [Zea mays]
gi|194701420|gb|ACF84794.1| unknown [Zea mays]
gi|194707566|gb|ACF87867.1| unknown [Zea mays]
Length = 274
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 89/222 (40%), Positives = 139/222 (62%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LG+++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 48 KSDIIVSPSILSANFAKLGDQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 107
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 108 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTSTIHLHRTVNQIKSLGAKAGVVLNP 167
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++ V+D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGG
Sbjct: 168 ATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRRLCAEKGVNPWIEVDGG 227
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V +N +++AGA+ +V GS+ F YA+ + +K S
Sbjct: 228 VGPKNAYKVIEAGANAIVAGSAVFGAPD---YAEAIKGIKTS 266
>gi|168014099|ref|XP_001759593.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689132|gb|EDQ75505.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+FS+LGE+I+ + KAG IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 67 KNDIIVSPSILSANFSKLGEQITAVEKAGCDWIHVDVMDGRFVPNITIGPLVVDAIRPVT 126
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 127 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCENASTIHLHRTINQIKSLGAKAGVVLNP 186
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
T +A +E V+D +D+ILIM+VNPGFGGQ IES + KIR + + ++ +EVDGG
Sbjct: 187 GTSLAQIEYVLDCVDLILIMSVNPGFGGQSFIESQVKKIRDLRKMCEILGVNPWIEVDGG 246
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
VT +N + +AGA+ LV GS+ F K YAK ++ +K S
Sbjct: 247 VTPKNAYKVTEAGANALVAGSAVFGAKD---YAKAISGIKTS 285
>gi|217969353|ref|YP_002354587.1| ribulose-phosphate 3-epimerase [Thauera sp. MZ1T]
gi|217506680|gb|ACK53691.1| ribulose-phosphate 3-epimerase [Thauera sp. MZ1T]
Length = 231
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 142/227 (62%), Gaps = 9/227 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++R ++ +
Sbjct: 3 RIAPSLLSADFARLGEEVRDVIAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPHTSAPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG ++ITFHPE+S H+ R+L I G + G+ NP TP+
Sbjct: 63 DVHLMVKPVDRIVPDFAKAGANVITFHPEASEHVDRTLGLIRDAGCQAGLVFNPATPLDW 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
++ V+D++D++L+M+VNPGFGGQ+ I T+ K+R A+A + R I LE+DGGV
Sbjct: 123 MDHVMDKLDVVLLMSVNPGFGGQKFIPETLNKLRAARARLDAYEARSGRRILLEIDGGVK 182
Query: 180 SRNIKSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLKKSALAI 223
+ NI ++ +AGAD V GS+ F Y L L+ A+
Sbjct: 183 TDNIAAIARAGADTFVAGSAVFGAAKAADPHRYDSILGALRAELAAV 229
>gi|225011623|ref|ZP_03702061.1| Ribulose-phosphate 3-epimerase [Flavobacteria bacterium MS024-2A]
gi|225004126|gb|EEG42098.1| Ribulose-phosphate 3-epimerase [Flavobacteria bacterium MS024-2A]
Length = 216
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 131/214 (61%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSILAADF+ L + I + A H D+MDG FVPNISFG V+ +++ ++
Sbjct: 2 SIKIAPSILAADFANLERDSKMINASEADWFHIDIMDGVFVPNISFGMPVLAAIQKHAKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D +I AD G ++T H E+ H+ R+L+ I + G K GVA+NP TPV
Sbjct: 62 PLDVHLMIIEPDRYIETFADLGATVLTVHYEACNHLHRTLQKIKSCGMKAGVALNPHTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
L +I +ID++ IM+VNPGFGGQ IE+T K+++ K LI K S +E+DGGVT
Sbjct: 122 NCLNSIIQDIDLVCIMSVNPGFGGQSFIENTYQKVKELKQLITLHKSSCLIEIDGGVTDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N +LV GAD+LV GS F K L +
Sbjct: 182 NASALVTCGADVLVAGSYVFKASNPAKNIKLLKE 215
>gi|91215975|ref|ZP_01252944.1| ribulose-phosphate 3-epimerase [Psychroflexus torquis ATCC 700755]
gi|91185952|gb|EAS72326.1| ribulose-phosphate 3-epimerase [Psychroflexus torquis ATCC 700755]
Length = 220
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 133/217 (61%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PSILAADF+ L ++ + + A H D+MDG FVPNISFG V++++ +
Sbjct: 1 MSDKL-IAPSILAADFANLQRDVEMVNTSQADWFHIDIMDGVFVPNISFGMPVLKAISKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D +I AD G +++T H E+ H+ RSL++I G + GVA+NP
Sbjct: 60 AKKFIDVHLMIVDPDRYIKEFADLGSNMLTVHYEACSHLHRSLQSIKNHGMQAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T V +L D I++IDM+ +M+VNPGFGGQ IE T KI+Q KALI + +E+DGGV
Sbjct: 120 TNVELLRDCINDIDMVCLMSVNPGFGGQHFIERTYKKIKQLKALILEEGADTKIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
T +N + L+ GAD+LV GS F L +
Sbjct: 180 TDKNAEELIACGADVLVAGSYVFKSDDPEETILNLKN 216
>gi|119964671|gb|ABM17100.1| ribulose-phosphate 3-epimerase [Sulfobacillus acidophilus DSM
10332]
Length = 232
Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 131/215 (60%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ I PSIL+ADF L +++ ++ GA IH DVMDG FVPNI+ G V+ +R +D
Sbjct: 7 PVLIAPSILSADFGHLADDVRDVVNRGADWIHVDVMDGRFVPNITMGPVVVEGIRPVTDR 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A AG + I+ H E++PH+ R+L IH +GK GVA+NP TPV
Sbjct: 67 PLDVHLMIVEPERYLEDFARAGAERISVHAEATPHLHRALEMIHGLGKLAGVALNPSTPV 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTS 180
+ + V + +D++L+MTVNPGFGGQ I + KIR+ + + ++ ++ +EVDGG+
Sbjct: 127 SAIYHVAENLDLVLLMTVNPGFGGQSFIRPMLTKIRETRDWLDRQGLTHVPIEVDGGINP 186
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K +++GA ++V GS+ F +++
Sbjct: 187 ETAKWAIESGATVMVAGSAIFRAPDRTLMIQQIRQ 221
>gi|150016037|ref|YP_001308291.1| ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
gi|149902502|gb|ABR33335.1| Ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
Length = 214
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I I K GA IH DVMDG FVPNISFG VI+S+R+ + V
Sbjct: 2 VKIAPSILSADFSKLGEDIERIDKGGADFIHIDVMDGSFVPNISFGLPVIKSIRNRTKKV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ ++I+ +AG DIIT H E+ HI R++ I + GKK +++NP TP +
Sbjct: 62 FDVHLMINNPSNYIDAFIEAGADIITIHHEADKHIDRTINYIKSKGKKAAISLNPGTPTS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+L+D+I +DM+LIM+VNPGFGGQ+ I ++ KIR+ K L + + +EVDGG+ N
Sbjct: 122 VLKDLIPSLDMVLIMSVNPGFGGQKFIPYSLDKIREIKELSDRLNPGLLIEVDGGIDKTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+K +++AGA+++V GS+ FN K L
Sbjct: 182 VKEVIEAGANVIVAGSAVFNGGEIDENIKALR 213
>gi|146297079|ref|YP_001180850.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410655|gb|ABP67659.1| ribulose-5-phosphate 3-epimerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 221
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/218 (43%), Positives = 144/218 (66%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+++ PSIL+ADFS L E+ + KAGA +H D+MDGCFV NI+ GA V+++LR +++
Sbjct: 2 SVKLAPSILSADFSDLKSEVKKLEKAGADLVHIDIMDGCFVENITIGAQVVKALRRHTNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + + HI+ ++G D IT H E++ H+ L I ++GKK VAINP TP+
Sbjct: 62 FFDVHLMVVNPEKHIDKFIESGADNITVHAETTHHLDALLNKIKSVGKKASVAINPATPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
++E+V++ +DM+L+MTVNPG+GGQ+ I T+ KI+ + + + +EVDGG+ +
Sbjct: 122 YLIENVLEIVDMVLVMTVNPGYGGQKFIPYTLKKIQNLSEIRKREGYNFEIEVDGGINEK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I V+AGAD++V GS F + K +N LK S
Sbjct: 182 TIVECVKAGADVIVAGSYVFESEN---IEKAINKLKNS 216
>gi|329117081|ref|ZP_08245798.1| ribulose-phosphate 3-epimerase [Streptococcus parauberis NCFD 2020]
gi|326907486|gb|EGE54400.1| ribulose-phosphate 3-epimerase [Streptococcus parauberis NCFD 2020]
Length = 220
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 137/217 (63%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PS+LAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +
Sbjct: 1 MT-SYKIAPSVLAADYANFASELKRIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+ + + +++ A AG DI+T H ES+ HI +L+ I A G K GV INP
Sbjct: 60 SKLVFDCHLMVVNPERYVDAYAQAGADIMTIHTESTSHIHGALQKIKAAGMKAGVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGV 178
TPV+ LE V+ +D +LIMTVNPGFGGQ I + K+++ L G S +EVDGGV
Sbjct: 120 TPVSALEPVLPLVDQVLIMTVNPGFGGQSFIPECLDKVKKVVDLRQAGGYSFDIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ I + QAGA++ V GS F + + L
Sbjct: 180 DDKTIAACAQAGANVFVAGSYLFKADDLVRQVQTLRK 216
>gi|167630208|ref|YP_001680707.1| ribulose-5-phosphate 3-epimerase [Heliobacterium modesticaldum
Ice1]
gi|167592948|gb|ABZ84696.1| ribulose-5-phosphate 3-epimerase [Heliobacterium modesticaldum
Ice1]
Length = 220
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 92/222 (41%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PSIL+ADF+ LG +++ + GA+ +H DVMDG FVPNI+ G V+ +LR S
Sbjct: 2 TIKIAPSILSADFANLGAQVAAVEAGGAEYLHIDVMDGHFVPNITIGPLVVAALRERSRM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI + D +I AG D+IT H E+ H+ R+L I G + GVA+NP TP
Sbjct: 62 VFDTHLMIEAPDKYILDFIQAGADLITVHQEACVHLHRTLSLIKEKGARAGVALNPATPW 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
L ++ +D++L+M+VNPGFGGQ+ I +PKI + + ++VDGGV
Sbjct: 122 QSLSCILPMVDLVLVMSVNPGFGGQKFIAGALPKIEALARYRQAQGLHYEIQVDGGVNRT 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+VQAGAD+LV GS+ F + + L+ +AL +
Sbjct: 182 TASQVVQAGADVLVAGSALFGTSDPRA---EVAQLRAAALTL 220
>gi|325567729|ref|ZP_08144340.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
gi|325158502|gb|EGC70649.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
Length = 217
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 2 MKLAPSILSADFANLQRDIELVERHGADYIHVDVMDGHFVPNITLGPNIVKAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ + +I+ A+AG DII H E++PHI R+++ I A K + INP TPV+
Sbjct: 62 LDVHLMITEPEKYIHAFAEAGADIIGIHAEATPHIHRAIQMIVAENVKAEIVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+ D +L+MTVNPGFGGQ IE ++ KI AL ++ +EVDGG+
Sbjct: 122 AIEHVLSMCDQVLVMTVNPGFGGQSFIEESLEKIAALAALKEEKGYHYDIEVDGGIVPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K ++AGA++ V GS ++ + + L +
Sbjct: 182 AKRCLEAGANVFVAGSYIYDADEPAAQIRALKE 214
>gi|294788189|ref|ZP_06753432.1| ribulose-phosphate 3-epimerase [Simonsiella muelleri ATCC 29453]
gi|294483620|gb|EFG31304.1| ribulose-phosphate 3-epimerase [Simonsiella muelleri ATCC 29453]
Length = 229
Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats.
Identities = 105/225 (46%), Positives = 149/225 (66%), Gaps = 11/225 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
MT +I PS+L+ADF+RLGEE+ + AGA IHFDVMD +VPN++FGA V ++L+
Sbjct: 1 MT-HFRIAPSLLSADFARLGEEVKAVVAAGADLIHFDVMDNHYVPNLTFGAMVCQALKPY 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D + D HLM+ +D I AG DIITFHPE+S H+ RSL I + GK+ G+ +NP
Sbjct: 60 CGDILMDVHLMVEPVDDLIQSFNQAGADIITFHPEASRHVDRSLSLIKSAGKQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLE 173
TP+ ++E+V+D++DM+LIM+VNPGFGGQ I +TI KI+Q K+++ + I +E
Sbjct: 120 ATPIYVIENVLDKLDMVLIMSVNPGFGGQSFIPNTINKIKQLKSILDEYESQTGKRIRIE 179
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
VDGGV NI + AGAD V GS+ F Q YA+ + +++
Sbjct: 180 VDGGVKVDNIGEIAAAGADTFVAGSAIFGQPD---YAQVMEQMRQ 221
>gi|182439856|ref|YP_001827575.1| ribulose-phosphate 3-epimerase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326780520|ref|ZP_08239785.1| ribulose-phosphate 3-epimerase [Streptomyces cf. griseus XylebKG-1]
gi|178468372|dbj|BAG22892.1| putative ribulose-phosphate 3-epimerase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326660853|gb|EGE45699.1| ribulose-phosphate 3-epimerase [Streptomyces cf. griseus XylebKG-1]
Length = 227
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ ++ +D
Sbjct: 3 QINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPIVEAIGKATDIPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEDPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LIGK + L+VDGGV++ I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELIGKHGLELWLQVDGGVSATTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGAD+ V GS+ + + + + L
Sbjct: 181 ERCAEAGADVFVAGSAVYGAQDPAAAVRELR 211
>gi|104779715|ref|YP_606213.1| ribulose-phosphate 3-epimerase [Pseudomonas entomophila L48]
gi|95108702|emb|CAK13396.1| D-ribulose-5-phosphate 3-epimerase [Pseudomonas entomophila L48]
Length = 224
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 103/225 (45%), Positives = 139/225 (61%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPYA-IAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GVTAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEASQHIDRSLQLIRDGGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGG
Sbjct: 120 ATGLDALKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGRDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
V NI+ + AGAD V GS+ FN ++ A A
Sbjct: 180 VNVNNIREITAAGADTFVAGSAIFNAPDYKEVIDKMRAEMALARA 224
>gi|258406077|ref|YP_003198819.1| ribulose-phosphate 3-epimerase [Desulfohalobium retbaense DSM 5692]
gi|257798304|gb|ACV69241.1| ribulose-phosphate 3-epimerase [Desulfohalobium retbaense DSM 5692]
Length = 225
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 92/220 (41%), Positives = 135/220 (61%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + PS+L++DF+RL EE+ + +AG +H+DVMDG FVPNI+ G VI++ R
Sbjct: 1 MNP-CIVSPSLLSSDFARLAEELQALEQAGVPWVHWDVMDGMFVPNITLGPPVIKAARPK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
FD HLMI +I A AG D+I H E+ H+ R + I G +T VA+NP
Sbjct: 60 CSLFFDVHLMIEDPGRYIESFAAAGADLICVHAEACLHLERVVSQIAEAGCQTAVALNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TP+ ++ ++ ++DM+LIM+VNPGFGGQ I ++ KIR + + R + ++VDGGV
Sbjct: 120 TPLEQIDYLLPQLDMVLIMSVNPGFGGQSFIPFSLDKIRGLRHRLDSRRLGTRIQVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN----QKGEISYAKRLN 214
T+ N +V AGAD LV GS+FF Q+G ++ R+
Sbjct: 180 TTANAAEIVTAGADTLVSGSAFFKHPSYQEGLAAFMARMQ 219
>gi|307727442|ref|YP_003910655.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1003]
gi|307587967|gb|ADN61364.1| ribulose-phosphate 3-epimerase [Burkholderia sp. CCGE1003]
Length = 288
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 89/222 (40%), Positives = 141/222 (63%), Gaps = 9/222 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+ADF+RL +EI ++T AGA IH DVMD +VPN++ G V ++R ++
Sbjct: 1 MRDFMIAPSLLSADFARLADEIRDVTAAGADWIHLDVMDNHYVPNLTVGPLVCAAIRPHT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM +D + A+AG + I+FHPE+S H+ R++ I + G + G+A+NP T
Sbjct: 61 RVPIDVHLMTMPVDPLVIAFAEAGANTISFHPEASLHVHRTIELIRSHGARVGLALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+A+L+ VI+ +D++L+M+VNPGFGGQ I T+ K+R + + R++ +EVD
Sbjct: 121 PLAVLDHVIERLDVVLLMSVNPGFGGQAFIPETLAKLRALRERVDATMQRTGRALLIEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
GGV + NI + AGAD+ V GS+ F YA+ +++++
Sbjct: 181 GGVKASNIAEIAAAGADVFVAGSAVFGAHD---YAQAIDEMR 219
>gi|224825004|ref|ZP_03698110.1| Ribulose-phosphate 3-epimerase [Lutiella nitroferrum 2002]
gi|224602675|gb|EEG08852.1| Ribulose-phosphate 3-epimerase [Lutiella nitroferrum 2002]
Length = 226
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 144/226 (63%), Gaps = 8/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P +I PS+L+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MRP-FRIAPSLLSADFARLGEEVRDVIAAGADIIHFDVMDNHYVPNLTVGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + D HLM++ +D+ A AG DIITFHPE+S HI R+L I G K G+ NP
Sbjct: 60 TSAPIDVHLMVTPVDALAASFAKAGADIITFHPEASHHIDRTLGLIKDAGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEV 174
TP++ L+ V+D+IDMIL+M+VNPGFGGQ+ I T+ K+R+A+ I + + I LEV
Sbjct: 120 TPLSFLDHVMDKIDMILLMSVNPGFGGQKFIPQTLNKVREARRRIDEYTAAHGGEIWLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
DGGV NI + AGAD V GS+ + + + +L K+
Sbjct: 180 DGGVKIDNIAEIAAAGADTFVAGSAIYGTDDYKATIDAMRAELAKA 225
>gi|295132790|ref|YP_003583466.1| ribulose-phosphate 3-epimerase [Zunongwangia profunda SM-A87]
gi|294980805|gb|ADF51270.1| ribulose-phosphate 3-epimerase [Zunongwangia profunda SM-A87]
Length = 220
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 142/221 (64%), Gaps = 3/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+LAADF+ L +I + K+ A+ H D+MDG FVPNISFG V++++ +
Sbjct: 1 MKEKI-IAPSLLAADFANLQRDIETVNKSQAQWFHVDIMDGVFVPNISFGMPVLQAINKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D +I AD G + +T H E+ PH+ R+L+ I A G K GVAINP
Sbjct: 60 AKKPLDVHLMIVDPDRYIKEFADLGANHLTVHYEACPHLHRTLQAIKAEGMKAGVAINPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T V +L+DVI +ID++L+M+VNPGFGGQ IE T K+++ K +I ++ +E+DGGV
Sbjct: 120 TNVDLLKDVIKDIDIVLVMSVNPGFGGQSFIEHTYHKVQRLKEMILNQNAETLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
T++N L+ AGAD+LV GS F + ++ K L L S
Sbjct: 180 TNKNALELINAGADILVAGSYVFKAENQLETIKELKHLANS 220
>gi|330828674|ref|YP_004391626.1| Ribulose-phosphate 3-epimerase [Aeromonas veronii B565]
gi|328803810|gb|AEB49009.1| Ribulose-phosphate 3-epimerase [Aeromonas veronii B565]
Length = 227
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 142/217 (65%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLG++++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 4 MKDFLIAPSILSADFARLGDDVAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYG 63
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM+ +D I A AG +ITFHPE+S H+ RSL I MG + G+ +NP
Sbjct: 64 IEAPIDVHLMVKPVDRIIPDFAKAGASLITFHPEASDHVDRSLGLIKEMGCQAGLVLNPA 123
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++ LE V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI + R I LE+DGGV
Sbjct: 124 TSLSCLEYVMDKLDVILLMSVNPGFGGQSFIPGTLDKLRQVRRLIDESGRDIRLEIDGGV 183
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + +AGAD+ V GS+ F+Q + ++
Sbjct: 184 KVDNIREIAEAGADMFVAGSAIFSQPDYKAVIDKMRA 220
>gi|168241620|ref|ZP_02666552.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450559|ref|YP_002047507.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|204928720|ref|ZP_03219919.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|194408863|gb|ACF69082.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|204322153|gb|EDZ07351.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205339056|gb|EDZ25820.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 225
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F + Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIF---DKPDYKKVIDEMR 216
>gi|157372833|ref|YP_001480822.1| ribulose-phosphate 3-epimerase [Serratia proteamaculans 568]
gi|157324597|gb|ABV43694.1| Ribulose-phosphate 3-epimerase [Serratia proteamaculans 568]
Length = 225
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 142/219 (64%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ +N+ AG +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCQALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+++ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGASYISFHPEASEHVDRTIQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ V+D+ID+IL+M+VNPGFGGQ I T+ K+RQ + +I + R I LEVDGGV
Sbjct: 121 TPLSYLDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKMIDESGRDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F++ Y + +++++
Sbjct: 181 KVDNIAEIAAAGADMFVAGSAIFSKPD---YRRVIDEMR 216
>gi|168232616|ref|ZP_02657674.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168260800|ref|ZP_02682773.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168818708|ref|ZP_02830708.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194472805|ref|ZP_03078789.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197251606|ref|YP_002148404.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|238913606|ref|ZP_04657443.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|194459169|gb|EDX48008.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197215309|gb|ACH52706.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205333095|gb|EDZ19859.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205344669|gb|EDZ31433.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350474|gb|EDZ37105.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|320087896|emb|CBY97658.1| D-ribulose-5-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 225
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F + Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIF---DKPDYKKVIDEMR 216
>gi|168014625|ref|XP_001759852.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688982|gb|EDQ75356.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 243
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 137/221 (61%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F+ LG++I + AG IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 15 KSDIIVSPSILSANFAILGDQIKAVENAGCDWIHVDVMDGRFVPNITIGPLVVDAIRPVT 74
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 75 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCENASTIHLHRTINQIKSLGAKAGVVLNP 134
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ +E V+D +D+ILIM+VNPGFGGQ IES + KI + + ++ ++ +EVDGG
Sbjct: 135 GTPLSQIEYVLDCVDLILIMSVNPGFGGQSFIESQVKKIADLRKMCAEKGVNPWIEVDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
VT +N +++AGA+ LV GS+ F K K + K+
Sbjct: 195 VTPKNAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTSKR 235
>gi|90580853|ref|ZP_01236655.1| ribulose-phosphate 3-epimerase [Vibrio angustum S14]
gi|90437924|gb|EAS63113.1| ribulose-phosphate 3-epimerase [Vibrio angustum S14]
Length = 224
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 141/222 (63%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA IHFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVDKVLAAGADVIHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGATMITFHVEASDHVDRTLQLIKEHGCKAGVVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ ++D++DMIL+M+VNPGFGGQ I ST+ K+R+ + I R I LE+DGGV
Sbjct: 121 TPLHHLDYIMDKVDMILLMSVNPGFGGQSFIPSTLDKLREVRKRIDASGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
NI+ + AGAD+ V GS+ FN+ ++ +L ++
Sbjct: 181 KVDNIREIAAAGADMFVAGSAIFNEPDYKVAIDKMRAELAEA 222
>gi|260770887|ref|ZP_05879816.1| ribulose-phosphate 3-epimerase [Vibrio furnissii CIP 102972]
gi|260614124|gb|EEX39314.1| ribulose-phosphate 3-epimerase [Vibrio furnissii CIP 102972]
gi|315178931|gb|ADT85845.1| ribulose-phosphate 3-epimerase [Vibrio furnissii NCTC 11218]
Length = 223
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 96/217 (44%), Positives = 136/217 (62%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++FGA + ++LR Y
Sbjct: 1 MKDFLIAPSILSADFARLGEDVEKVLAAGADVVHFDVMDNHYVPNLTFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG +ITFH E+S H+ R+L+ I G K GV +NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGASMITFHVEASEHVDRTLQLIKEHGCKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++ L+ ++D++DMIL+M+VNPGFGGQ I T+ K+R + LI R I LE+DGGV
Sbjct: 121 TSLSHLDYIMDKVDMILLMSVNPGFGGQSFIPHTLDKLRAVRKLIDDSGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + AGAD+ V GS+ F Q + +
Sbjct: 181 KVDNIREIAAAGADMFVAGSAIFGQPDYKAVIDAMRA 217
>gi|260890514|ref|ZP_05901777.1| hypothetical protein GCWU000323_01692 [Leptotrichia hofstadii
F0254]
gi|260859756|gb|EEX74256.1| ribulose-phosphate 3-epimerase [Leptotrichia hofstadii F0254]
Length = 212
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 145/212 (68%), Gaps = 7/212 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+LAADFS+L EEI+ + K GA+ +H DVMDG FVPNISFGA VI SLR +S+ VF
Sbjct: 8 IIAPSLLAADFSKLKEEITEVEKLGAEYLHLDVMDGNFVPNISFGAPVISSLRKHSNLVF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ D I A DIIT H E++ H+ R+++ I + GKK GVA+NP TP+ +
Sbjct: 68 DVHLMVNEPDYLIEDFAQF-SDIITVHAEAAKHLNRTIQLIKSFGKKVGVALNPSTPLDV 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
++ +D IDM+LIMTVNPGFGGQ+ I + KI+ + + ++I +EVDGG+ + K
Sbjct: 127 IKYDLDNIDMVLIMTVNPGFGGQKFIPEMLQKIKDLRKI--NQNIDIEVDGGINAETGKL 184
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +AGA++LV GS F+ +Y +++ LK
Sbjct: 185 VKEAGANVLVAGSYIFSG----NYKEKIESLK 212
>gi|158423434|ref|YP_001524726.1| ribulose-phosphate 3-epimerase [Azorhizobium caulinodans ORS 571]
gi|158330323|dbj|BAF87808.1| ribulose-phosphate 3-epimerase [Azorhizobium caulinodans ORS 571]
Length = 226
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 101/197 (51%), Positives = 137/197 (69%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFSRLGEE+ ++ AGA IH DVMDG FVPNI+FG DVI++LR ++D VFD
Sbjct: 6 IAPSILASDFSRLGEEVRDVAAAGADYIHLDVMDGHFVPNITFGPDVIKALRPHTDKVFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS ++ ++ A AG DIIT E++ H+ R L+ I +GKK GVA+NP T ++L
Sbjct: 66 VHLMISPVEPYLEAFAAAGADIITVQAEATDHLDRCLQVIRGLGKKAGVALNPATHESVL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++D+ID++ +MTVNPGFGGQ I +PK+ + + +I R I LE+DGGV
Sbjct: 126 TYLLDKIDLVCVMTVNPGFGGQAFIPDVLPKVERIRDMIRGRDIRLEIDGGVNPTTGALC 185
Query: 187 VQAGADLLVVGSSFFNQ 203
+AGAD+LV GS+ F
Sbjct: 186 AKAGADVLVAGSAVFKG 202
>gi|322390321|ref|ZP_08063849.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis ATCC
903]
gi|321142969|gb|EFX38419.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis ATCC
903]
Length = 219
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 138/220 (62%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSIL+AD++ E+ + AGA H DVMDG FVPNISFGA V+ S+R +S
Sbjct: 1 MKTMKIAPSILSADYANFESELKRLGAAGADYAHIDVMDGHFVPNISFGAGVVESMRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+++ + HI A AG DII+ H E++PHI +L+ I G K V INP T
Sbjct: 61 KLVFDCHLMVTNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRQAGVKASVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV ++ V++ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+
Sbjct: 121 PVDSIKHVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELAALREEKGLDFDIEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ I AGA++ V GS FN +R+ L+ +
Sbjct: 181 GQTISQAKAAGANVFVAGSYVFNG----DVNERVQTLRDA 216
>gi|226532822|ref|NP_001148585.1| ribulose-phosphate 3-epimerase [Zea mays]
gi|195620592|gb|ACG32126.1| ribulose-phosphate 3-epimerase [Zea mays]
Length = 274
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 139/222 (62%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LG+++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 48 KSDIIVSPSILSANFAKLGDQVKAVEVAGCDWIHVDVMDGRFVPNITIGPFVVDALRPVT 107
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 108 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTSTIHLHRTVNQIKSLGAKAGVVLNP 167
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++ ++D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGG
Sbjct: 168 ATPLTAIDYILDVVDLVLIMSVNPGFGGQSFIESQVRKIAELRRLCAEKGVNPWIEVDGG 227
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V +N +++AGA+ +V GS+ F YA+ + +K S
Sbjct: 228 VGPKNAYKVIEAGANAIVAGSAVFGAPD---YAEAIKGIKTS 266
>gi|254495199|ref|ZP_05108123.1| ribulose-phosphate 3-epimerase [Polaribacter sp. MED152]
gi|85819551|gb|EAQ40708.1| ribulose-phosphate 3-epimerase [Polaribacter sp. MED152]
Length = 218
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 139/212 (65%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L +I + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 5 IAPSILAADFANLQRDIEMVNNSEADWFHIDIMDGVFVPNISFGMPVLKAITQHAKKTID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I AD G DI+T H E+ H+ R+++ I A G K GVA+NP TP+A+L
Sbjct: 65 VHLMIVNPDQYIQTFADLGADILTVHYEACTHLHRTIQAIKAAGLKAGVALNPHTPIAVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
ED+I+++DM+ +M+VNPGFGGQ IE+T K+ Q K LI + + +E+DGGVT++N
Sbjct: 125 EDIIEDLDMVCLMSVNPGFGGQSFIENTYKKVSQLKHLIEFTESNCQIEIDGGVTNKNAN 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+L++AGA++LV GS F L ++
Sbjct: 185 ALIEAGANVLVAGSYVFKSDNPTETIADLKNI 216
>gi|261880696|ref|ZP_06007123.1| ribulose-phosphate 3-epimerase [Prevotella bergensis DSM 17361]
gi|270332468|gb|EFA43254.1| ribulose-phosphate 3-epimerase [Prevotella bergensis DSM 17361]
Length = 222
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 133/221 (60%), Gaps = 2/221 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PS+LA+DF+ L +E+ I ++ A +H DVMDG FVPNISFG V+R+++
Sbjct: 2 KTMISPSLLASDFANLKDEVDMINRSEADWLHCDVMDGSFVPNISFGFPVMRAVQKICTK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H MI + + +I A G +++ H E+ H+ R++ I G GV +NP TPV
Sbjct: 62 PLDVHYMIVNPERYIVQTAKVGAAVMSVHYEACVHLNRTIHEIQEEGMMAGVVLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LEDVI++ D++LIM+VNPGFGGQ+ IE+TI ++R+ + +I + +EVDGGV
Sbjct: 122 GMLEDVIEDADLVLIMSVNPGFGGQKFIENTIGRVRRLRRMIEESGSHALIEVDGGVNGT 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
L+QAGAD+LV GS F I L ++ S A
Sbjct: 182 TAPRLIQAGADVLVSGSYVFGAADPIQTIHDLKNMSTSQRA 222
>gi|240948205|ref|ZP_04752599.1| ribulose-phosphate 3-epimerase [Actinobacillus minor NM305]
gi|240297445|gb|EER47971.1| ribulose-phosphate 3-epimerase [Actinobacillus minor NM305]
Length = 224
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 137/215 (63%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PSIL+A+ ++LGE++ N+ +AG IHFDVMD FVPN++FG + ++LR Y
Sbjct: 5 PFLIAPSILSANLAKLGEDVKNVLEAGGDIIHFDVMDNHFVPNLTFGPAICQALRDYGIT 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ I+ I A AG + ITFHPE++ HI R+L+ I +G K G+ NP TP
Sbjct: 65 APIDVHLMVKPIERLIPEFAKAGANYITFHPEATDHIDRNLQLIRELGCKAGLVFNPATP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+R+ + I +++ EVDGGV
Sbjct: 125 LHYLDYVMDKVDMILLMGVNPGFGGQKFIPATLNKLREVRKRIDASGLNIRLEVDGGVKI 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD V GS+ F+ + ++
Sbjct: 185 ENIAEIAEAGADTFVAGSAIFDLPDYKAVIDKMRA 219
>gi|121604882|ref|YP_982211.1| ribulose-phosphate 3-epimerase [Polaromonas naphthalenivorans CJ2]
gi|120593851|gb|ABM37290.1| ribulose-5-phosphate 3-epimerase [Polaromonas naphthalenivorans
CJ2]
Length = 236
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 148/224 (66%), Gaps = 7/224 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLGEE+ I AGA +HFDVMD +VPN++ G V ++R +
Sbjct: 12 RIAPSILSADFSRLGEEVRAIEAAGAALVHFDVMDNHYVPNLTIGPLVCEAIRPHVKIGI 71
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I + A AG ++ITFHPE+S H+ R+L+ I G K G+A+NP TP+A
Sbjct: 72 DVHLMVEPVDALIPLFARAGANLITFHPEASRHVDRTLQLIRDHGCKAGIALNPATPLAW 131
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEVDGGVT 179
++ V+D +D++L+M+VNPGFGGQ I +T+ K+R+A+ I S I LEVDGGV
Sbjct: 132 MDHVMDRLDIVLLMSVNPGFGGQAFIPATLAKLREARRRIDAHSAAGGQPIWLEVDGGVK 191
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSALA 222
+ NI + AGAD V GS+ F + Y + +++L+++A A
Sbjct: 192 TGNIGQIAAAGADTFVAGSAVFGSPDADGGYHRVMHELRRAAQA 235
>gi|16762804|ref|NP_458421.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144291|ref|NP_807633.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415399|ref|YP_152474.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|167549317|ref|ZP_02343076.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|197261699|ref|ZP_03161773.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197364329|ref|YP_002143966.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|213053386|ref|ZP_03346264.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213426747|ref|ZP_03359497.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213648702|ref|ZP_03378755.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865260|ref|ZP_03387379.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289824815|ref|ZP_06544258.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25292419|pir||AG1000 ribulose-phosphate 3-epimerase (EC 5.1.3.1) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505110|emb|CAD08131.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139928|gb|AAO71493.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56129656|gb|AAV79162.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095806|emb|CAR61378.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197239954|gb|EDY22574.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|205325667|gb|EDZ13506.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 225
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGAD+ V GS+ F + Y K +++++
Sbjct: 186 GEIAAAGADMFVAGSAIF---DKPDYKKVIDEMR 216
>gi|320011944|gb|ADW06794.1| ribulose-phosphate 3-epimerase [Streptomyces flavogriseus ATCC
33331]
Length = 227
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 88/219 (40%), Positives = 128/219 (58%), Gaps = 4/219 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 3 QINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPIVEALSKATDTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEDADRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++ I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSATTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+ V GS+ + + + L + A
Sbjct: 181 ERCAEAGADVFVAGSAVYGAEDPAEAVRALRAQADTVTA 219
>gi|327313444|ref|YP_004328881.1| ribulose-phosphate 3-epimerase [Prevotella denticola F0289]
gi|326944103|gb|AEA19988.1| ribulose-phosphate 3-epimerase [Prevotella denticola F0289]
Length = 227
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADF L +E+ I ++ A +H DVMDG FVPNISFG VI+++
Sbjct: 4 IVSPSLLSADFLHLDKEVEMINESEADWLHMDVMDGVFVPNISFGFPVIKAVGKACRKPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +++I ADAG I+ H E+ H+ R+L+ I A G K GV +NP TPV +
Sbjct: 64 DVHLMIVHPENYIQQTADAGAAIMNVHYEACVHLHRTLQAIRAAGMKAGVTLNPSTPVNV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
LED+I +ID++ +M+VNPGFGGQ+ IE +I K+++ + LI + S +EVDGGV +
Sbjct: 124 LEDIIGDIDIVQLMSVNPGFGGQKFIEHSIRKVQRLRQLIERESSRALIEVDGGVQAETA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV AG D+LV GS F + L L+K
Sbjct: 184 PRLVDAGVDILVSGSYVFKADDPKAAIHALKGLRK 218
>gi|167998340|ref|XP_001751876.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696974|gb|EDQ83311.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 243
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 93/222 (41%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE+I + AG IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 15 KNDIIVSPSILSANFAKLGEQIKAVENAGCDWIHVDVMDGRFVPNITIGPLVVDAIRPVT 74
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 75 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCENASTIHLHRTINQIKSLGAKAGVVLNP 134
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
T ++ +E V+D +D+ILIM+VNPGFGGQ IE+ + KI + L ++ ++ +EVDGG
Sbjct: 135 GTSLSQIEYVLDCVDLILIMSVNPGFGGQSFIETQVKKIADLRKLCAEKGVNPWIEVDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
VT +N +++AGA+ LV GS+ F K YA+ ++ +K S
Sbjct: 195 VTPKNAYKVIEAGANALVAGSAVFGAKD---YAEAISGIKAS 233
>gi|52080182|ref|YP_078973.1| ribulose-phosphate 3-epimerase [Bacillus licheniformis ATCC 14580]
gi|52785559|ref|YP_091388.1| ribulose-phosphate 3-epimerase [Bacillus licheniformis ATCC 14580]
gi|319646038|ref|ZP_08000268.1| rpe protein [Bacillus sp. BT1B_CT2]
gi|52003393|gb|AAU23335.1| ribulose-5-phosphate 3-epimerase Rpe [Bacillus licheniformis ATCC
14580]
gi|52348061|gb|AAU40695.1| Rpe [Bacillus licheniformis ATCC 14580]
gi|317391788|gb|EFV72585.1| rpe protein [Bacillus sp. BT1B_CT2]
Length = 218
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 147/218 (67%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF+RLGEEI ++ + GA IH DVMDG FVPN++ G V+ ++R ++
Sbjct: 2 VYVAPSILSADFARLGEEIRDVEQGGADFIHIDVMDGHFVPNLTIGPLVVEAVRPITELP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I A AG DI++ H E+ PH+ R+++ I G K GV +NP TPV
Sbjct: 62 LDVHLMIEAPDRYIPAFAKAGADILSVHVEACPHLHRTIQLIKEQGVKAGVVLNPHTPVQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+E V++++D++L+MTVNPGFGGQ I S +PKIRQ K + ++ ++ +EVDGGV
Sbjct: 122 QIEHVLEDLDLVLLMTVNPGFGGQSFISSVLPKIRQVKEMAEQKGLADLLIEVDGGVNKN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ ++AGA+LLV GS+ +N+K K ++D+K +
Sbjct: 182 TARQCIEAGANLLVAGSAVYNEKDR---KKAISDIKGA 216
>gi|293603055|ref|ZP_06685490.1| ribulose-phosphate 3-epimerase [Achromobacter piechaudii ATCC
43553]
gi|292818550|gb|EFF77596.1| ribulose-phosphate 3-epimerase [Achromobacter piechaudii ATCC
43553]
Length = 242
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 138/220 (62%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S +I PSIL+ADF+RLGEE+ N+ AGA IH DVMD +VPN++ G V ++R +
Sbjct: 13 TASTRITPSILSADFARLGEEVRNVVAAGADWIHVDVMDNHYVPNLTIGPMVCAAIRPHV 72
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ +D + + A AG D I+FHP++S H+ R+L I G K G+ NP T
Sbjct: 73 QVPIDVHLMVEPVDDLVPMFAKAGADYISFHPDASRHVDRTLSLIRENGCKAGLVFNPAT 132
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P++ L+ V+D+ID+ILIM+VNPGFGGQ I T+ K+R+A+A I + I L+VD
Sbjct: 133 PLSYLDYVMDKIDLILIMSVNPGFGGQSFIPGTLTKLREARARIDAWTQAGGQEIVLQVD 192
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV NI + +AGAD V GS+ F + K + +
Sbjct: 193 GGVKIDNIAEIRRAGADTFVAGSAIFGKPDYAGIIKSMRE 232
>gi|261364653|ref|ZP_05977536.1| ribulose-phosphate 3-epimerase [Neisseria mucosa ATCC 25996]
gi|288567255|gb|EFC88815.1| ribulose-phosphate 3-epimerase [Neisseria mucosa ATCC 25996]
Length = 227
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 144/223 (64%), Gaps = 9/223 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MNQKFRIAPSILSADFARLGEEVTKVIEAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I G + G+ +NP
Sbjct: 61 ATVPIDVHLMVEPVDDLIQAFAKAGASIITFHPEASHHIDRSLSLIKDAGCQAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ + ++ + R I++EV
Sbjct: 121 TPTYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRTMLDQYEAQSGRHIAIEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
DGG+ + NI ++ AGAD V GS+ F + Y + +++
Sbjct: 181 DGGIKTDNIAAVAAAGADTFVAGSAIFGKPD---YKAVITEMR 220
>gi|89889345|ref|ZP_01200856.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Flavobacteria bacterium BBFL7]
gi|89517618|gb|EAS20274.1| ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
[Flavobacteria bacterium BBFL7]
Length = 221
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 137/217 (63%), Gaps = 2/217 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L ++ I ++ A H D+MDG FVPNISFG V+R + ++ D
Sbjct: 5 IAPSVLAADFANLQRDVEMINRSEADWFHIDIMDGVFVPNISFGMPVLRDIAKHATKTID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI D ++ AD GCDI+T H E+ H+ R+L+ I + G K GVA+NP T V +L
Sbjct: 65 CHLMIVDPDRYVKTFADLGCDILTVHYEACTHLHRTLQLIKSHGMKAGVALNPHTSVHLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
DVI +IDM+ +M+VNPGFGGQ IE+T KI Q K +I + +E+DGGVT +N K
Sbjct: 125 SDVIQDIDMVCLMSVNPGFGGQSFIENTYDKITQLKKIIDFKGCDTLIEIDGGVTDKNAK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
LV AGAD+LV GS F +++ L + A+
Sbjct: 185 QLVDAGADVLVAGSYVFKSSDQVATIAGLKSMVNPAI 221
>gi|312867496|ref|ZP_07727704.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis F0405]
gi|311096902|gb|EFQ55138.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis F0405]
Length = 219
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 141/220 (64%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++I PSIL+AD++ E+ + AGA H DVMDG FVPNISFGA V+ S+R +S
Sbjct: 1 MKTMKIAPSILSADYANFESELKRLEAAGADYAHIDVMDGHFVPNISFGAGVVESMRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+++ + HI A AG DII+ H E++PHI +L+ I G K V INP T
Sbjct: 61 KLVFDCHLMVTNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRQAGVKASVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV ++ V++ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+
Sbjct: 121 PVDSIKHVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELAALREEKGLDFDIEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
S++I +AGA++ V GS FN +R+ L+ +
Sbjct: 181 SQSISQAKEAGANVFVAGSYVFNG----DVNERVQTLRDA 216
>gi|299469833|emb|CBN76687.1| ribulose-phosphate 3-epimerase [Ectocarpus siliculosus]
Length = 276
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 141/220 (64%), Gaps = 4/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+AD ++LG+E+ N AGA +HFDVMD +VPN++ G V + LR +
Sbjct: 48 KKDFWIAPSILSADMAKLGQEVDNAMSAGADIVHFDVMDNHYVPNLTIGPLVCKGLRDHG 107
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+S +D + A+AG ITFHPE+SPH+ R+L I + G K G+ NP
Sbjct: 108 VTNPIDVHLMVSPVDRIVGDFAEAGASFITFHPEASPHVDRTLGLIKSYGCKAGLVFNPA 167
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ + V+D++D+IL+M+VNPGFGGQ I ST+ K+R+A+ +I + + EVDGG
Sbjct: 168 TPLDHAKYVLDKVDIILLMSVNPGFGGQSFIPSTLDKLREARKMIDESGYDIRLEVDGGC 227
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLK 217
NIK + +AGAD+ V GS+ FN E +Y + ++ ++
Sbjct: 228 GVANIKEIAEAGADMFVAGSAIFNNPRTEENYKETIDKMR 267
>gi|270264421|ref|ZP_06192687.1| ribulose-phosphate 3-epimerase [Serratia odorifera 4Rx13]
gi|270041557|gb|EFA14655.1| ribulose-phosphate 3-epimerase [Serratia odorifera 4Rx13]
Length = 225
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 140/219 (63%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ +N+ AG +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG + I+FHPE+S H+ R+++ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAAAGANYISFHPEASEHVDRTIQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + LI R I LEVDGGV
Sbjct: 121 TPLSYLDYVMDKVDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDSGRDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F + Y K +++++
Sbjct: 181 KVDNIAEIAAAGADMFVAGSAIFGKPD---YRKVIDEMR 216
>gi|120600627|ref|YP_965201.1| ribulose-phosphate 3-epimerase [Shewanella sp. W3-18-1]
gi|146294783|ref|YP_001185207.1| ribulose-phosphate 3-epimerase [Shewanella putrefaciens CN-32]
gi|120560720|gb|ABM26647.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. W3-18-1]
gi|145566473|gb|ABP77408.1| ribulose-5-phosphate 3-epimerase [Shewanella putrefaciens CN-32]
Length = 236
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 13 MRP-FLIAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 71
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 72 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKESGCKAGLVFNP 131
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I + EVDGG
Sbjct: 132 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGG 191
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD+ V GS+ F + + +
Sbjct: 192 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKAVVDEMRA 229
>gi|88800167|ref|ZP_01115736.1| ribulose-phosphate 3-epimerase [Reinekea sp. MED297]
gi|88777148|gb|EAR08354.1| ribulose-phosphate 3-epimerase [Reinekea sp. MED297]
Length = 222
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 140/219 (63%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V ++LR++
Sbjct: 1 MSEFIIAPSILSADFARLGEEVDQVIAAGADWVHFDVMDNHYVPNLTIGPMVCKALRNHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM+S +D I +AG +ITFHPE S HI RSL+ I G K G+ NP
Sbjct: 61 VNAPIDVHLMVSPVDRLIGDFVEAGASMITFHPEGSEHIDRSLQLIKDAGLKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ V+D IDMILIM+VNPGFGGQ I S + K+R+A+ I R I LEVDGGV
Sbjct: 121 TPLHHLDYVMDRIDMILIMSVNPGFGGQSFIPSALDKLREARQRIEASGRDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI+ + QAGAD V GS+ FN YA + D++
Sbjct: 181 KVDNIREIAQAGADAFVAGSAIFNASD---YAGVIQDMR 216
>gi|332829254|gb|EGK01908.1| ribulose-phosphate 3-epimerase [Dysgonomonas gadei ATCC BAA-286]
Length = 217
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 139/214 (64%), Gaps = 2/214 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+A+F L ++ I K+ A H DVMDG FVPNISFG +I+ + + +
Sbjct: 4 KIAPSLLSANFLNLQADVEMINKSEADWFHCDVMDGSFVPNISFGFPIIKQISTIAKKPL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I+ + +AG ++ H E+ H+ R++ IH G K GV +NP TPV++
Sbjct: 64 DVHLMIVNPDKYISQVKEAGAYMMNVHYEACTHLHRTVSGIHEAGMKAGVTLNPHTPVSL 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED++ ++DM+L+MTVNPGFGGQ+ IE ++ K+ + K +I KR++ +EVDGGV +
Sbjct: 124 LEDILQDVDMVLLMTVNPGFGGQKFIEHSLSKVSRLKDMILKRNLQTLIEVDGGVNLQTG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K LV AGAD+LV G++ F + +L LK
Sbjct: 184 KQLVDAGADVLVAGNAVFADADPVEMIHKLKSLK 217
>gi|294673008|ref|YP_003573624.1| ribulose-phosphate 3-epimerase [Prevotella ruminicola 23]
gi|294472970|gb|ADE82359.1| ribulose-phosphate 3-epimerase [Prevotella ruminicola 23]
Length = 215
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF L +I I ++ A +H DVMDG FVPNISFG V+ ++ D
Sbjct: 4 VSPSLLAADFLHLDRDIDMINRSEADWLHLDVMDGSFVPNISFGFPVLEAVAKACKKPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + +I A G ++ H E+ H+ R+++ IH G K GV +NP TP+++L
Sbjct: 64 VHYMIEHPERYIAQTAKLGAMMMNVHYEACVHLHRTIQEIHQAGMKAGVTLNPATPISVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I+++DM+L+M+VNPGFGGQ+ IE+TI K+++ + LI ++ +EVDGGV +
Sbjct: 124 EDIINDVDMVLLMSVNPGFGGQKFIENTIDKVKRLRQLITEKGSHALIEVDGGVQGQTAP 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AG D+LV GS F K L L
Sbjct: 184 RLVEAGVDVLVSGSYVFGAADPEGIIKSLRSL 215
>gi|295839960|ref|ZP_06826893.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SPB74]
gi|197696795|gb|EDY43728.1| ribulose-phosphate 3-epimerase [Streptomyces sp. SPB74]
Length = 228
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 2 AVQINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGTPIVEALAKATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 60 PLDCHLMIEEPDRWAPAYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + L+ + + L +VDGGV++
Sbjct: 120 EQYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRQLVARHGLDLWVQVDGGVSAE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ +AGAD+ V GS+ + K + + L
Sbjct: 180 TVERCAEAGADVFVAGSAVYGAKEPAAAVRGLR 212
>gi|71900811|ref|ZP_00682930.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Ann-1]
gi|71729432|gb|EAO31544.1| Ribulose-phosphate 3-epimerase [Xylella fastidiosa Ann-1]
Length = 223
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 139/225 (61%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG V ++LRSY
Sbjct: 1 MSNCLIAPSILSADFARLGAEVDAVLAAGADWIHFDVMDNHYVPNLTFGPMVCKALRSYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG +I+FH E+S H+ +++ I + G G+ NP
Sbjct: 61 ITAPIDVHLMVEPVDRIVPDFAQAGASMISFHMEASRHVHLTIQLIKSHGCMAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TPV +L+ V+ E+D++L+M+VNPGFGGQ+ I T+ K+R + I R + L+VDGGV
Sbjct: 121 TPVDMLDWVLPELDLVLLMSVNPGFGGQRFIPGTLDKLRLVRKKIDLLGRPVRLQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI ++ +AGAD V GS+ F+ Y + ++ + A+
Sbjct: 181 GIDNIGAIAEAGADTFVAGSAIFHAPD---YGDVIAHMRAAVAAV 222
>gi|332749517|gb|EGJ79934.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-671]
gi|332996670|gb|EGK16295.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-272]
gi|332997188|gb|EGK16804.1| ribulose-phosphate 3-epimerase [Shigella flexneri K-218]
Length = 221
Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/210 (46%), Positives = 136/210 (64%), Gaps = 6/210 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGAD+ V GS+ F+Q Y K L
Sbjct: 186 GEIAAAGADMFVAGSAIFDQPD---YKKSL 212
>gi|260893169|ref|YP_003239266.1| ribulose-phosphate 3-epimerase [Ammonifex degensii KC4]
gi|260865310|gb|ACX52416.1| ribulose-phosphate 3-epimerase [Ammonifex degensii KC4]
Length = 215
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 133/214 (62%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PS+L+ADFS L ++ + +AGA +H DVMDG FVPNI+FG VI +LR S V
Sbjct: 2 IKVAPSLLSADFSCLLRDVKRVEEAGADYLHLDVMDGHFVPNITFGPPVIAALRPQSHLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + +I DAG D+IT H E+ H+ R+L I G + GVA+NP TP
Sbjct: 62 FDVHLMIEAPERYIKDFVDAGADLITVHVEACRHLHRTLTAIKENGCRAGVALNPATPPQ 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+D +D++L+M+VNPGFGGQ I + +PKI ++ I +R + + VDGGV +
Sbjct: 122 AVEYVLDLVDLVLVMSVNPGFGGQSFIPAVLPKISLLRSWIEERGLAVEIAVDGGVNRQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+V+AGA +LV G++ F + +
Sbjct: 182 APMVVKAGATVLVAGTAVFGAPDPRVVIQEFKSI 215
>gi|167855979|ref|ZP_02478726.1| predicted transporter [Haemophilus parasuis 29755]
gi|167852916|gb|EDS24183.1| predicted transporter [Haemophilus parasuis 29755]
Length = 224
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+AD +RLG++++ + KAGA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 3 KQPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHYVPNLTFGPAICKALRDYG 62
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM +D I A AG DIITFHPE++ HI RSL+ I G K+G+ NP
Sbjct: 63 ITCPIDVHLMAKPVDRLIPDFAKAGADIITFHPEATEHIDRSLQLIREHGCKSGLVFNPA 122
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ + ST+ K+R+A+ I ++ EVDGGV
Sbjct: 123 TPLSYLDYVMDKVDVILLMSVNPGFGGQAFLPSTLNKLREARRRIDASGFNIRLEVDGGV 182
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD+ V GS+ F+Q + ++
Sbjct: 183 KVNNIAEIAEAGADMFVAGSAIFDQPDYKAVIDQMRA 219
>gi|292670247|ref|ZP_06603673.1| ribulose-phosphate 3-epimerase [Selenomonas noxia ATCC 43541]
gi|292648199|gb|EFF66171.1| ribulose-phosphate 3-epimerase [Selenomonas noxia ATCC 43541]
Length = 237
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+ LG ++ + +AGA+ IH DVMDG FVPNI+ G V+ SLR S
Sbjct: 22 ERPTIIAPSILSADFANLGADVRRVEEAGAEYIHIDVMDGTFVPNITLGPCVVESLRKVS 81
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+VFD HLM+ ++HI A AG DIITFH E++ H R ++ I A G K G+A+NP T
Sbjct: 82 KAVFDVHLMVEHPETHIEPFAKAGADIITFHVEATRHAHRVIQQIKAAGCKAGIALNPGT 141
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVT 179
+ LE++ID+ DM+L+MTVNPGFGGQ+ IE+T+ KI I + I +EVDGG+
Sbjct: 142 SIYTLEELIDDADMVLLMTVNPGFGGQKFIENTVGKIHALYHTIADNELDIDIEVDGGIN 201
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +S+ AGA++LV GS + + L
Sbjct: 202 AETAESVRSAGANVLVAGSYIYGSSDIAAAIASLR 236
>gi|317051359|ref|YP_004112475.1| ribulose-phosphate 3-epimerase [Desulfurispirillum indicum S5]
gi|316946443|gb|ADU65919.1| ribulose-phosphate 3-epimerase [Desulfurispirillum indicum S5]
Length = 215
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 149/217 (68%), Gaps = 7/217 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+RLGE+I T GA IH DVMDG FVPNI+ G V+ SL+ ++
Sbjct: 2 IRIAPSILSADFARLGEDIDRCT--GADLIHVDVMDGHFVPNITIGPPVVASLKKHTSVP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI++ ++ A AG DIIT H ES H+ R++ + A+G++ GV++NP TP+
Sbjct: 60 LDVHLMIANPQQYVEAFAAAGADIITLHAESDVHLHRAIHQVKALGRQVGVSLNPATPLC 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++E+V+ ++DM+LIM+VNPGFGGQ+ I++++ KIR+ +A+I + IS+EVDGGVT N
Sbjct: 120 MIEEVLPDLDMVLIMSVNPGFGGQKFIDASLDKIRRLRAMISATGKDISIEVDGGVTMDN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I + +AGAD V GS+ F+ Y +N L++
Sbjct: 180 IAQIHRAGADTFVAGSAIFSTPD---YGHTINALRQQ 213
>gi|171060569|ref|YP_001792918.1| ribulose-phosphate 3-epimerase [Leptothrix cholodnii SP-6]
gi|170778014|gb|ACB36153.1| Ribulose-phosphate 3-epimerase [Leptothrix cholodnii SP-6]
Length = 228
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 139/220 (63%), Gaps = 8/220 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++L+ +S
Sbjct: 4 PTYRIAPSILSADFARLGEEVRNVLAAGADWIHFDVMDNHYVPNLTFGPMVCQALKKHSV 63
Query: 63 SV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
D HLM+ +D A AG D+++FHPE+S H+ R+L+ I G + G+
Sbjct: 64 KPDGIACPIDVHLMVQPVDELALAFAKAGADLVSFHPEASAHVDRTLQLIKGAGCQAGLV 123
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEV 174
NP + + +LE VID +D+ILIM+VNPGFGGQ I+S + KI +A+ LI R I LEV
Sbjct: 124 FNPASSLDVLEYVIDRVDLILIMSVNPGFGGQSFIDSALRKIERARRLIEATGRDIRLEV 183
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
DGGV NI+ + AGAD V GS+ FN S +
Sbjct: 184 DGGVKVDNIRRIADAGADTFVAGSAIFNTPDYKSVIDAMR 223
>gi|125973095|ref|YP_001037005.1| ribulose-5-phosphate 3-epimerase [Clostridium thermocellum ATCC
27405]
gi|256004598|ref|ZP_05429576.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum DSM 2360]
gi|281417290|ref|ZP_06248310.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum JW20]
gi|125713320|gb|ABN51812.1| ribulose-5-phosphate 3-epimerase [Clostridium thermocellum ATCC
27405]
gi|255991470|gb|EEU01574.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum DSM 2360]
gi|281408692|gb|EFB38950.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum JW20]
gi|316940684|gb|ADU74718.1| ribulose-phosphate 3-epimerase [Clostridium thermocellum DSM 1313]
Length = 220
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 99/215 (46%), Positives = 146/215 (67%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEE+ I KAGA +H DVMDG FVPNI+ G V++SL+ S
Sbjct: 3 IKIAPSILSADFSKLGEEVLRIEKAGADLVHIDVMDGHFVPNITIGPPVVKSLKKVSKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I ADAG DII+ H E+ H+ R+++ I +G K VA+NP TP+
Sbjct: 63 FDVHLMIENPDMYIESFADAGADIISVHAEACRHLHRTIQKIKQLGIKAAVALNPATPLC 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+E V++++DMIL+MTVNPGFGGQ+ I KI + + ++ R +I +EVDGG+ +
Sbjct: 123 AVEWVMEDVDMILLMTVNPGFGGQKYINGVTRKIEELERIVESRGLNIDIEVDGGIDTET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ + +AGA+++V GS+ F + AK + +L+
Sbjct: 183 VQYVTKAGANVIVSGSTIFAAED---TAKIIQELR 214
>gi|298368829|ref|ZP_06980147.1| ribulose-phosphate 3-epimerase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282832|gb|EFI24319.1| ribulose-phosphate 3-epimerase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 225
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 102/226 (45%), Positives = 149/226 (65%), Gaps = 9/226 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF++LGEE+SN+ AGA IHFDVMD +VPN++ G V +++ Y+
Sbjct: 3 TFRIAPSILSADFAKLGEEVSNVIGAGADLIHFDVMDNHYVPNLTIGPMVCSAIKPYATV 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I AG DIITFHPE+S HI RSL + +MG + G+ +NP TPV
Sbjct: 63 PVDVHLMVEPVDDLIQSFGKAGADIITFHPEASKHIDRSLSLVKSMGCQAGLVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
++E+V+D++DM+L+M+VNPGFGGQ I T+ KIRQ + ++ R I+LEVDGG
Sbjct: 123 NLIENVLDKLDMVLLMSVNPGFGGQSFIPHTLIKIRQVRGMLDNYESQTGRRIALEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + NI + AGAD V GS+ F+Q Y +++++K +
Sbjct: 183 IKTGNIAEVAAAGADTFVAGSAIFSQPD---YKAVIDEMRKELAKV 225
>gi|258541969|ref|YP_003187402.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-01]
gi|256633047|dbj|BAH99022.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-01]
gi|256636104|dbj|BAI02073.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-03]
gi|256639159|dbj|BAI05121.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-07]
gi|256642213|dbj|BAI08168.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-22]
gi|256645268|dbj|BAI11216.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-26]
gi|256648323|dbj|BAI14264.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-32]
gi|256651376|dbj|BAI17310.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654367|dbj|BAI20294.1| ribulose-phosphate 3-epimerase [Acetobacter pasteurianus IFO
3283-12]
Length = 225
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 99/210 (47%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+RLGEE+S + +AGA +H DVMDG FVPNISFG V+++LR SD FD
Sbjct: 9 IAPSVLAADFTRLGEEVSALKQAGADWVHLDVMDGHFVPNISFGPAVVKALRPCSDLPFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D ++ A AG D I H E+ PH RSL+ I +G K GV + P TP +
Sbjct: 69 VHLMIAPVDPYLEAFAQAGADQILIHIEAGPHTHRSLQRIRDLGAKPGVVLCPATPPEAI 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+V+D +D+IL+MTVNPGFGGQ+ + S +PKI++ + +I + R I L VDGG+ +
Sbjct: 129 SEVLDLVDIILVMTVNPGFGGQKFLSSQLPKIQRIRDMITQSGRDIRLAVDGGIDASTAP 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++AGAD+L+ GS+ + +K + L
Sbjct: 189 LAIEAGADVLIAGSAVYGKKDYAAAIAALR 218
>gi|304437054|ref|ZP_07397017.1| ribulose-phosphate 3-epimerase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370005|gb|EFM23667.1| ribulose-phosphate 3-epimerase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 236
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PSIL+ADF+ LG E+ + +AGA+ IH DVMDG FVPNI+ GA V+ SLR S
Sbjct: 21 ERPTIVAPSILSADFANLGAEVRRVEEAGAEYIHIDVMDGTFVPNITMGACVVESLRKVS 80
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+VFD HLM+ ++HI A AG DIITFH E++ H R ++ I A G + G+A+NP T
Sbjct: 81 KTVFDVHLMVEHPETHIESFARAGADIITFHVEATRHAHRVIQQIKAAGCRAGIALNPGT 140
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
+ LE++ID++DM+L+MTVNPG GGQ+ IE+T+ KI I + + +EVDGG+
Sbjct: 141 SIYTLEELIDDVDMVLLMTVNPGLGGQKFIENTLGKIHALYHTIEGNELDVDIEVDGGIN 200
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +S+ AGA++LV GS + + L
Sbjct: 201 AETAESVRSAGANVLVAGSYIYGAADVSAAIASLR 235
>gi|319408633|emb|CBI82288.1| ribulose-phosphate 3-epimerase [Bartonella schoenbuchensis R1]
Length = 224
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 113/220 (51%), Positives = 152/220 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PS+LAADFS+LG+EIS++ AGA +H D+MDG FVPNI+FG DV+++LR
Sbjct: 1 MPRPHFISPSLLAADFSKLGQEISDVVDAGADWLHLDIMDGHFVPNITFGPDVVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++FD HLMI+ +D ++ A AG DIIT H E+ PHI RSL+TI AMGKK GV+INP
Sbjct: 61 TKAIFDVHLMIAPVDPYLEAFAQAGADIITIHAEAGPHIHRSLQTIKAMGKKAGVSINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFGGQ I KI + K +I R I LEVDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGGQSFIPEMKNKIERVKNMIANRPIDLEVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGA+ V GS+ + + Y R+N L+++A
Sbjct: 181 GTIGIAAKAGANAFVAGSAIYKNGNKDLYKTRINALRQAA 220
>gi|152995088|ref|YP_001339923.1| ribulose-phosphate 3-epimerase [Marinomonas sp. MWYL1]
gi|150836012|gb|ABR69988.1| Ribulose-phosphate 3-epimerase [Marinomonas sp. MWYL1]
Length = 223
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 145/222 (65%), Gaps = 6/222 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I PSIL+ADF+RLGEE+ N+ +AGA IHFDVMD +VPN++ G V ++LR++ +
Sbjct: 4 FIIAPSILSADFARLGEEVDNVLEAGADIIHFDVMDNHYVPNLTIGPMVCKALRNHGVTA 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I +AG IITFHPE+S HI RSL+ I G K G+ NP T +
Sbjct: 64 NIDVHLMVKPVDRMIGDFIEAGASIITFHPEASEHIDRSLQMIRDGGCKAGLVFNPATSL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
L+ V+D+IDM+L+M+VNPGFGGQ I T+ K+R+A+ALI ++ EVDGGV+ +
Sbjct: 124 EHLKYVMDKIDMVLLMSVNPGFGGQSFIPGTLDKLREARALIDASGYNIRLEVDGGVSEK 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + +AGAD V GS+ F + Y ++ ++K ++
Sbjct: 184 NIAEIARAGADTFVAGSAIFGKDD---YKSVIDAMRKELASV 222
>gi|71066270|ref|YP_264997.1| ribulose-5-phosphate 3-epimerase [Psychrobacter arcticus 273-4]
gi|71039255|gb|AAZ19563.1| ribulose-5-phosphate 3-epimerase [Psychrobacter arcticus 273-4]
Length = 229
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 153/225 (68%), Gaps = 7/225 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF++LGEE+ + +GA IHFDVMD +VPN++FG+ + ++LR Y
Sbjct: 5 SKPYLIAPSILSADFAKLGEEVERVLASGADVIHFDVMDNHYVPNLTFGSMICKALRDYG 64
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM+S +DS I +AG IITFHPE+S HI RSL+ I G + G+ +NP
Sbjct: 65 IEAPIDVHLMVSPVDSMIEQFLEAGASIITFHPEASSHIDRSLQLIKDGGAECGLVLNPA 124
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGV 178
TP+ L+ V+D++D IL+M+VNPG+GGQ IE T+ K+RQ + I R I LEVDGG+
Sbjct: 125 TPLHYLDYVMDKVDQILLMSVNPGYGGQSFIEGTLEKVRQVRQRIITSGREIRLEVDGGI 184
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK-KSALA 222
+ NI+++ +AGAD+ V GS+ FNQ+ Y ++ ++ + ALA
Sbjct: 185 KASNIRAIAEAGADMFVAGSAIFNQED---YKAAIDAMRTELALA 226
>gi|288926485|ref|ZP_06420405.1| ribulose-phosphate 3-epimerase [Prevotella buccae D17]
gi|315608679|ref|ZP_07883659.1| ribulose-phosphate 3-epimerase [Prevotella buccae ATCC 33574]
gi|288336776|gb|EFC75142.1| ribulose-phosphate 3-epimerase [Prevotella buccae D17]
gi|315249648|gb|EFU29657.1| ribulose-phosphate 3-epimerase [Prevotella buccae ATCC 33574]
Length = 218
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 134/217 (61%), Gaps = 2/217 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PS+L+A+F L ++ I ++ A +H DVMDG FVPNISFG V+ ++ Y
Sbjct: 2 KTMVSPSLLSANFIDLKSDVEMINRSEADWLHLDVMDGVFVPNISFGFPVMEAVGKYCTK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H MI + +I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV
Sbjct: 62 PLDVHFMIVHPEHYIEQTAKLGAMMMNVHYEACIHLHRTIQQIHAAGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LEDVI ++DM+LIM+VNPGFGGQ+ IE+TI K+++ + LI + +EVDGGV +
Sbjct: 122 GVLEDVIRDVDMVLIMSVNPGFGGQKFIENTIRKVQRLRKLIDETGSHALIEVDGGVQAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV+AG D+LV GS F +S K L +LK+
Sbjct: 182 TAPLLVRAGVDVLVSGSYIFKNIDPVSCIKALKELKR 218
>gi|226940126|ref|YP_002795199.1| Rpe [Laribacter hongkongensis HLHK9]
gi|226715052|gb|ACO74190.1| Rpe [Laribacter hongkongensis HLHK9]
Length = 226
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 144/226 (63%), Gaps = 7/226 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++R ++
Sbjct: 1 MRNFRIAPSILSADFARLGEEVRDVVAAGADIIHFDVMDNHYVPNLTIGPMVCEAIRPHT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +DS I + A AG ++ITFHPE+S HI RSL I G K G+ NP T
Sbjct: 61 SAPIDVHLMVKPVDSLIPMFAKAGANLITFHPEASEHIDRSLGLIKEHGCKAGLVFNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEVD 175
++ L+ V+D+IDMILIM+VNPGFGGQ I + KIR A+ I + I LEVD
Sbjct: 121 SLSYLDHVMDKIDMILIMSVNPGFGGQSFIPEALNKIRAARQRIDAWTAVHGGEIWLEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
GG+ + NI+++ +AGAD V GS+ + Q + + +L + A
Sbjct: 181 GGIKAGNIRAVAEAGADTFVAGSAIYGQPDYRAVIDAMRAELAQVA 226
>gi|167625981|ref|YP_001676275.1| ribulose-phosphate 3-epimerase [Shewanella halifaxensis HAW-EB4]
gi|167356003|gb|ABZ78616.1| Ribulose-phosphate 3-epimerase [Shewanella halifaxensis HAW-EB4]
Length = 224
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 143/227 (62%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MRP-FLIAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCQALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRIIPDFAAAGASIITFHPEASEHVDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST K+RQ + LI + +VDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTFDKLRQVRKLIDDSGYDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ FN+ Y +++++ +++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNKPD---YKAVIDEMRAELASVE 223
>gi|319405625|emb|CBI79248.1| ribulose-phosphate 3-epimerase [Bartonella sp. AR 15-3]
Length = 224
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 114/221 (51%), Positives = 155/221 (70%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+LA+DFS+LG+E+S++ AGA IHFD+MDG FVPNISFG DVI++LR
Sbjct: 1 MSRSHLIAPSLLASDFSKLGQELSDVLDAGADWIHFDIMDGHFVPNISFGPDVIKALRPQ 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ +VFD HLMI+ +D ++ A AG DIIT H ESS H+ RSL+ I AMGKK G+AINP
Sbjct: 61 TKAVFDVHLMIAPVDPYLEAFAKAGSDIITIHAESSTHLHRSLQMIKAMGKKAGIAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T ILE ++D++D+ILIMTVNPGFGGQ I KI++ K +I R I LEVDGG+T
Sbjct: 121 TSEHILEYLLDQLDLILIMTVNPGFGGQNFIPDMENKIKRVKNMIANRPIDLEVDGGITI 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA++ V GS+ + + Y R++ L+++ +
Sbjct: 181 DTIGKTAKAGANIFVAGSAIYKNGNKNLYKTRISALRQAVI 221
>gi|295398477|ref|ZP_06808514.1| ribulose-phosphate 3-epimerase [Aerococcus viridans ATCC 11563]
gi|294973292|gb|EFG49082.1| ribulose-phosphate 3-epimerase [Aerococcus viridans ATCC 11563]
Length = 218
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+A+F + +E++ I KAGA +H DVMDG FVPN++FGA V+ +LR +
Sbjct: 3 MYIAPSILSANFGKFIDEVNRIEKAGADWVHIDVMDGHFVPNLTFGAGVVEALRPNTKMT 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++H+ A+AG D T H E++ H+ ++TIH G K GVAINP TPV+
Sbjct: 63 LDCHLMVANPEAHVETFANAGADYFTVHYEATSHLHGLIQTIHKHGMKAGVAINPATPVS 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+ ++ ++DMIL+MTVNPGFGGQ IEST+ KI + A + +EVDGG+ +
Sbjct: 123 AIAPILKDVDMILVMTVNPGFGGQSFIESTVNKIAELSAFRAENDATFLIEVDGGINAET 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + GAD V GS FN+ L
Sbjct: 183 ARICAENGADAFVAGSYIFNKDDVKQPIDALK 214
>gi|228469707|ref|ZP_04054675.1| ribulose-phosphate 3-epimerase [Porphyromonas uenonis 60-3]
gi|228308726|gb|EEK17452.1| ribulose-phosphate 3-epimerase [Porphyromonas uenonis 60-3]
Length = 215
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADF L +EI+ I ++ +H DVMDG FVPN+SFG +I ++R
Sbjct: 3 IVSPSLLSADFLHLADEITMINESQCDWLHIDVMDGVFVPNLSFGFPIIEAIRPICQKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI I+ A G I+ H E PH+ R+LR I G + V +NP TPV +
Sbjct: 63 DVHLMIVEPWKFIDQFAKLGIHIMNVHYEVCPHLHRTLRAIREAGMRPAVTLNPHTPVEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L D++ E DM+L+M+VNPG+GGQ+ IE ++ K+ + + +I ++ +S ++VDGGV
Sbjct: 123 LTDILCEADMVLLMSVNPGYGGQKFIEHSVRKVERLRKMIQEQGLSTLIQVDGGVNLETG 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+AGAD LV GS+ F +L+ L
Sbjct: 183 RQLVEAGADSLVAGSAVFKAPSPQEMIAQLHAL 215
>gi|329767165|ref|ZP_08258693.1| ribulose-phosphate 3-epimerase [Gemella haemolysans M341]
gi|328837890|gb|EGF87515.1| ribulose-phosphate 3-epimerase [Gemella haemolysans M341]
Length = 214
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 131/210 (62%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSIL+ADF+ L +I + G H DVMDG FVPNISFG +I ++R +D +F
Sbjct: 3 KILPSILSADFANLERDIKELENIGIDMFHIDVMDGNFVPNISFGFPIIEAIRPKTDKIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI++ ++++ GCD+++FH E++ H R ++ I GKK GV +NP+TP+
Sbjct: 63 DCHLMIANPENYVEQFCKVGCDMVSFHIEATNHADRLIQVIKDNGKKAGVVLNPQTPLES 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ ++D +LIMTVNPGFGGQ+ I + KI + + +++ + +EVDGG+
Sbjct: 123 IKYLLPKLDYVLIMTVNPGFGGQKFIPEMLEKIEELGKIRKEKNYNFLIEVDGGINVETS 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K+ GADLLV GS F + L
Sbjct: 183 KACRDKGADLLVCGSFLFGASDKEKTLGEL 212
>gi|313886426|ref|ZP_07820145.1| ribulose-phosphate 3-epimerase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924107|gb|EFR34897.1| ribulose-phosphate 3-epimerase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 215
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADF L +EI+ I ++ +H DVMDG FVPN+SFG +I ++R
Sbjct: 3 IVSPSLLSADFLHLADEITMINESQCDWLHIDVMDGVFVPNLSFGFPIIEAIRPICQKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI I+ A G I+ H E PH+ R+LR I G + V +NP TPV +
Sbjct: 63 DVHLMIVEPWKFIDQFAKLGIHIMNVHYEVCPHLHRTLRAIREAGMRPAVTLNPHTPVEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L D++ E DM+L+M+VNPG+GGQ+ IE +I K+ + + +I ++ +S ++VDGGV
Sbjct: 123 LTDILCEADMVLLMSVNPGYGGQKFIEQSIRKVERLRKMIQEQGLSTLIQVDGGVNLETG 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+AGAD LV GS+ F +L+ L
Sbjct: 183 RQLVEAGADSLVAGSAVFKAPRPQEMIAQLHAL 215
>gi|17547598|ref|NP_521000.1| ribulose-phosphate 3-epimerase [Ralstonia solanacearum GMI1000]
gi|17429902|emb|CAD16586.1| probable ribulose-phosphate 3-epimerase protein [Ralstonia
solanacearum GMI1000]
Length = 242
Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 135/227 (59%), Gaps = 12/227 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS--- 61
+I PSIL+ADF+RLGEE+ + + GA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVIEGGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQRD 69
Query: 62 --DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALTKLRAVRQKLDAYADRTGRRILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKS 219
+DGGV + NI + +AGAD V GS+ F + + Y + L+ +
Sbjct: 190 IDGGVKADNIAEIARAGADTFVAGSAVFGKPDADGGYRGTVGALRSA 236
>gi|257877698|ref|ZP_05657351.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC20]
gi|257811864|gb|EEV40684.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC20]
Length = 217
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 2 IKLAPSILSADFANLQRDIELVERHGADYIHVDVMDGHFVPNITLGPNIVKAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ + +I+ A+AG DII H E++PHI R+++ I A K + INP TPV+
Sbjct: 62 LDVHLMITEPEKYIHAFAEAGADIIGIHAEATPHIHRAIQMIVAENVKAEIVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+ D +L+MTVNPGFGGQ IE ++ KI AL ++ +EVDGG+
Sbjct: 122 AIEHVLSMCDQVLVMTVNPGFGGQSFIEESLEKIAVLAALKEEKGYHYDIEVDGGIVPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K ++AGA++ V GS ++ + + L +
Sbjct: 182 AKRCLEAGANVFVAGSYIYDADEPAAQIRALKE 214
>gi|298209057|ref|YP_003717236.1| ribulose-phosphate 3-epimerase [Croceibacter atlanticus HTCC2559]
gi|83848984|gb|EAP86853.1| ribulose-phosphate 3-epimerase [Croceibacter atlanticus HTCC2559]
Length = 219
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 98/217 (45%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSILAADF+ L +I + + A H D+MDG FVPNISFG V++++ +
Sbjct: 1 MSQK-RIAPSILAADFANLQRDIELVNNSDADWFHIDIMDGVFVPNISFGMPVLKAINKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLMI D +I A+ G +++T H E+ H+ R+L+ I A G K GVAINP
Sbjct: 60 ANKTIDVHLMIVDPDRYIKTFAELGSNVLTVHYEACTHLHRTLQAIKAEGMKAGVAINPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LED+I++ID++ IM+VNPGFGGQ IE+T K+ + K +I + +E+DGGV
Sbjct: 120 TPVDLLEDIINDIDVVCIMSVNPGFGGQSFIENTYKKVTRLKEIILNNNAETLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
T++N K LV AGAD+LV GS F + K L
Sbjct: 180 TNKNAKELVNAGADVLVAGSYVFGSSDPLKTIKDLKA 216
>gi|223945381|gb|ACN26774.1| unknown [Zea mays]
Length = 246
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 139/222 (62%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LG+++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 20 KSDIIVSPSILSANFAKLGDQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 79
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 80 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQTSTIHLHRTVNQIKSLGAKAGVVLNP 139
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ ++ ++D +D++LIM+VNPGFGGQ IES + KI + + L ++ ++ +EVDGG
Sbjct: 140 ATPLNAIDYILDVVDLVLIMSVNPGFGGQSFIESQVRKIAELRRLCAEKGVNPWIEVDGG 199
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V +N +++AGA+ +V GS+ F YA+ + +K S
Sbjct: 200 VGPKNAYKVIEAGANAIVAGSAVFGAPD---YAEAIKGIKTS 238
>gi|227431993|ref|ZP_03914013.1| ribulose-5-phosphate 3-epimerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352278|gb|EEJ42484.1| ribulose-5-phosphate 3-epimerase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 218
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+AD++ L ++ + AGA+ +H DVMDG FVP IS+G + ++ LR +D V
Sbjct: 4 IIAPSILSADYTNLERDVKLVEAAGAEYLHIDVMDGTFVPAISYGPNWVKQLRPETDLVL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + + ADAG DII H E++PHI R+L+ I G K V INP TPV+
Sbjct: 64 DVHLMIQNPERFVEEFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVSA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+E V+D +D +L+MTVNPGFGGQ+ + ST+ KI Q + +R +E+DGGV + I
Sbjct: 124 IEAVLDMVDQVLVMTVNPGFGGQKFLPSTLQKIEQLQTFREERGFDFDIEIDGGVNNETI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
KS AGA++ V GS +++ + L DL K
Sbjct: 184 KSAYDAGANVFVAGSYVYDKVDPAAKIGILKDLIK 218
>gi|113972019|ref|YP_735812.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. MR-4]
gi|113886703|gb|ABI40755.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. MR-4]
Length = 225
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 141/227 (62%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ F ++ Y +++++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKRD---YKAVVDEMRAELAKVE 223
>gi|114045765|ref|YP_736315.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. MR-7]
gi|113887207|gb|ABI41258.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. MR-7]
Length = 225
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 140/227 (61%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ F + Y +++++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPD---YKAVVDEMRAELAKVE 223
>gi|281419731|ref|ZP_06250730.1| ribulose-phosphate 3-epimerase [Prevotella copri DSM 18205]
gi|281406260|gb|EFB36940.1| ribulose-phosphate 3-epimerase [Prevotella copri DSM 18205]
Length = 217
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 91/215 (42%), Positives = 129/215 (60%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PS+L+A+F L +I I K+ A +H DVMDG FVPNISFG VI ++
Sbjct: 2 KTMVSPSLLSANFIDLKSDIEMINKSEADWLHLDVMDGVFVPNISFGFPVIEAVSKVCTK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H MI +++I A G ++ H E+ H+ R+++ IHA G K GV +NP TPV
Sbjct: 62 PLDVHFMIQHPENYIEQTAKLGAMMMNVHYETCTHLHRTIQQIHAAGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
+LED+I ++DM+L+M+VNPGFGGQ+ IE+TI KI + + LI + +EVDGGV +
Sbjct: 122 CVLEDIICDVDMVLLMSVNPGFGGQKFIENTIKKIGRLRQLIKESGSQALIEVDGGVQAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AG D+LV GS F + L +L
Sbjct: 182 TAPRLVKAGVDVLVSGSYVFKSTDPYATIHALKEL 216
>gi|154251775|ref|YP_001412599.1| ribulose-phosphate 3-epimerase [Parvibaculum lavamentivorans DS-1]
gi|154155725|gb|ABS62942.1| Ribulose-phosphate 3-epimerase [Parvibaculum lavamentivorans DS-1]
Length = 220
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 108/221 (48%), Positives = 153/221 (69%), Gaps = 3/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I+I PSILA+DF+RLGEE+ IT+AGA IH DVMDG FVPNI+ G DV++++R +S
Sbjct: 1 MSGIKIAPSILASDFARLGEEVRAITEAGADYIHVDVMDGHFVPNITIGPDVVKAIRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D VFD HLMIS +D +I+ A AG DIITFHPE+ PH R+++ I A G K G+++NP T
Sbjct: 61 DKVFDVHLMISPVDLYIDAFAKAGADIITFHPEAGPHPHRTIQAIKAAGCKAGLSLNPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ +L ++ ++D++L+M+VNPGFGGQ IES + +I + I + R++ LEVDGG+
Sbjct: 121 PLELLWPLLGDLDLVLVMSVNPGFGGQSFIESQLARIEIIRKRIDESGRAVELEVDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+LV G++ F G +YAK + L+ A
Sbjct: 181 LDTAPRAIAAGADVLVAGTATFKG-GPSAYAKNIAALRGGA 220
>gi|254295352|ref|YP_003061375.1| ribulose-phosphate 3-epimerase [Hirschia baltica ATCC 49814]
gi|254043883|gb|ACT60678.1| ribulose-phosphate 3-epimerase [Hirschia baltica ATCC 49814]
Length = 218
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 109/218 (50%), Positives = 148/218 (67%), Gaps = 3/218 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PSILAADF++LGEE+ I AGA IH DVMDG FVPNI+ G DV+++LR +S
Sbjct: 1 MSEILISPSILAADFAKLGEEVRAIDTAGADMIHIDVMDGHFVPNITIGPDVVKALRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D FD HLMIS +D+++ A+AG D+IT HPE+ PH R+++ IH +GKK G A+NP T
Sbjct: 61 DKPFDVHLMISPVDAYLEAFANAGADLITAHPEAGPHFHRTVQAIHKLGKKAGAALNPST 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P L+ V++E+D++LIM+VNPGFGGQ I++ + KI + I LEVDGGVT
Sbjct: 121 PANALDYVLEELDLVLIMSVNPGFGGQSFIDNQLRKIEDIRNRIDALGTKTILEVDGGVT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N ++ AGA+ LV GS+ F KG +YA ++ L+
Sbjct: 181 PDNCSKVINAGANALVAGSAVFK-KGPANYANAISALR 217
>gi|119943954|ref|YP_941634.1| ribulose-phosphate 3-epimerase [Psychromonas ingrahamii 37]
gi|119862558|gb|ABM02035.1| ribulose-5-phosphate 3-epimerase [Psychromonas ingrahamii 37]
Length = 222
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 139/211 (65%), Gaps = 3/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDVEKVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG IITFHPE+S H+ RSL+ I G K G+ +NP T + +
Sbjct: 66 DVHLMVKPVDTMIVEFAKAGASIITFHPEASDHVDRSLQLIKEHGCKAGLVLNPATSLEV 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L V+D++D++L+M+VNPGFGGQ I T+ K+RQ K LI R I L+VDGGV + NI
Sbjct: 126 LTHVMDKLDVVLLMSVNPGFGGQSFIPHTLEKLRQVKKLITTSGRDIRLQVDGGVKTDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K + +AGAD+ V GS+ FNQ ++
Sbjct: 186 KEIAEAGADMFVSGSAIFNQPDYKVVIDKMR 216
>gi|227824646|ref|ZP_03989478.1| ribulose-phosphate 3-epimerase [Acidaminococcus sp. D21]
gi|226905145|gb|EEH91063.1| ribulose-phosphate 3-epimerase [Acidaminococcus sp. D21]
Length = 213
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 135/210 (64%), Gaps = 2/210 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL++DFS L +E + I AGA +H DVMDG FVPN++FGA V++ LR +D FD
Sbjct: 4 VAPSILSSDFSCLADETARIKAAGADWVHIDVMDGRFVPNLTFGAPVVKCLRKKTDMFFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLM+ +++++ A AG D+I H E++ H+ R L IH G K GVA+NP +P+ ++
Sbjct: 64 CHLMVEQPENYVDAFAAAGADMIVIHTEATKHLHRVLEAIHGKGIKAGVALNPASPLCLV 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+V+ DM+LIM+VNPGFGGQ+ IE++I KI + K I + +EVDGG+ K
Sbjct: 124 EEVLPYADMVLIMSVNPGFGGQKFIETSIDKIHRLKERIKQGGYKTLIEVDGGINKETGK 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ +AGAD+LV GS F L
Sbjct: 184 AVREAGADVLVAGSYIFGSPDMKKAISYLR 213
>gi|225028025|ref|ZP_03717217.1| hypothetical protein EUBHAL_02294 [Eubacterium hallii DSM 3353]
gi|224954625|gb|EEG35834.1| hypothetical protein EUBHAL_02294 [Eubacterium hallii DSM 3353]
Length = 281
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF+ LG ++ AGA+ +H DVMDG FVP ISFG VI++LR +D +F
Sbjct: 67 ILAPSILSADFANLGRDVLTAIDAGAEYVHIDVMDGMFVPQISFGNPVIKALRPLTDVIF 126
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +I A AG DIIT H E+ H+ R + I GKK VAINP TP++
Sbjct: 127 DAHLMIEDPGRYIEDFAKAGADIITVHAEACTHLDRVVHQIKDCGKKAAVAINPATPLSA 186
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V+ E+DM+L+MTVNPGFGGQ+ I K+R+ + +I ++++ ++VDGGV + NI
Sbjct: 187 IEYVLPELDMVLVMTVNPGFGGQKYIPYCGEKVRELRKMITEKNLDVDIQVDGGVKALNI 246
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + GA++ V GS+ F E + + L + K
Sbjct: 247 AEIAECGANIFVCGSAVFEGNIEKNVKEILEQMNK 281
>gi|329847340|ref|ZP_08262368.1| ribulose-phosphate 3-epimerase [Asticcacaulis biprosthecum C19]
gi|328842403|gb|EGF91972.1| ribulose-phosphate 3-epimerase [Asticcacaulis biprosthecum C19]
Length = 219
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 110/219 (50%), Positives = 151/219 (68%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSILA+DFSRLGEE+ IT+AGA +H DVMDG FVPNI+ G DV+++LR +
Sbjct: 1 MTAPL-ICPSILASDFSRLGEEVRAITEAGADFVHIDVMDGHFVPNITIGPDVVKALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ FDCHLMIS +DS + +AG D+I+ HPE+ PH+ R+L+ I +G K GV +NP
Sbjct: 60 TNLPFDCHLMISPVDSFLEAFRNAGADLISVHPEAGPHLHRTLKYIRQLGAKAGVVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV IL+ V++++D++LIM+VNPGFGGQ IES + KI +A + L+VDGGV
Sbjct: 120 TPVEILDWVMEDVDLVLIMSVNPGFGGQSFIESQLRKIETVRARLDATGSAAILQVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++N S V AGA LV G++ F G +YA + LK
Sbjct: 180 NAQNAASCVAAGATALVAGTAVFKG-GRDAYADNIKTLK 217
>gi|289548380|ref|YP_003473368.1| ribulose-phosphate 3-epimerase [Thermocrinis albus DSM 14484]
gi|289181997|gb|ADC89241.1| ribulose-phosphate 3-epimerase [Thermocrinis albus DSM 14484]
Length = 222
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 141/219 (64%), Gaps = 2/219 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF RLGE+I + GA +HFDVMDG FVPNISFG V+ S++ + D
Sbjct: 4 LAPSILSADFYRLGEQIEACVRGGADILHFDVMDGLFVPNISFGPVVLESIKKHCPLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D +I AG +++ H E + HI R++ I ++G K GV INP TP+ +L
Sbjct: 64 AHLMIVEPDRYIRDFVMAGASMVSVHIEGNHHIHRTVELIKSLGAKAGVVINPGTPLHLL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+V+ +D +L+M+VNPGFGGQ I ++ +IRQ K +IG+ S+ +EVDGG+ NI+
Sbjct: 124 EEVLYYVDFVLLMSVNPGFGGQTFIPRSLERIRQLKEMIGRINPSVLIEVDGGIKEDNIR 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ +AGAD+LVVGS F+ + ++L L + A+
Sbjct: 184 LVAEAGADILVVGSGIFSHPDVEAQTRKLKSLLNVSEAV 222
>gi|253570299|ref|ZP_04847708.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 1_1_6]
gi|251840680|gb|EES68762.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 1_1_6]
Length = 216
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 132/218 (60%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++ I ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFGYLARDLEMINRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLMI + + I + G + H E+ H+ R ++ I G + V INP
Sbjct: 59 TDKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACTHLHRVIQQIKEAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIQDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F ++L+ L
Sbjct: 179 NLETGARLVEAGADVLVAGNAVFGAPDPEEMIRQLHKL 216
>gi|160893335|ref|ZP_02074122.1| hypothetical protein CLOL250_00884 [Clostridium sp. L2-50]
gi|156865027|gb|EDO58458.1| hypothetical protein CLOL250_00884 [Clostridium sp. L2-50]
Length = 219
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 144/216 (66%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L E+I I +AG++ IH DVMDG FVPNISFGA VI+S+R SD V
Sbjct: 2 LKLSPSVLSADFGHLAEDIQIIDQAGSEYIHLDVMDGSFVPNISFGAPVIKSVRPVSDKV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + G DI+T H E+ H+ R++ I +G K GVA+NP TP++
Sbjct: 62 FDVHLMIDEPTRFLQDYKNCGADIVTVHAEACKHLHRTIAAIKELGMKAGVALNPATPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+++ V++++DM+LIM+VNPGFGGQ+ I S++ KI + + L+ R + ++VDGGVT N
Sbjct: 122 VIDYVLEDVDMVLIMSVNPGFGGQKFIPSSLRKIAETRKLLNSRGLQTDIQVDGGVTLAN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+++AGA++LV GS+ F + + +K
Sbjct: 182 AAEIIRAGANVLVAGSAVFKG----DKTENVKAFRK 213
>gi|325290440|ref|YP_004266621.1| ribulose-5-phosphate 3-epimerase [Syntrophobotulus glycolicus DSM
8271]
gi|324965841|gb|ADY56620.1| ribulose-5-phosphate 3-epimerase [Syntrophobotulus glycolicus DSM
8271]
Length = 218
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 139/212 (65%), Gaps = 2/212 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+ADF++LGEE+ + GA+ +H DVMDG FVPN++ G VI++LR S
Sbjct: 2 PIKIAPSILSADFTKLGEEVKRVEAGGAEILHIDVMDGHFVPNMTIGPPVIKALRKVSSM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI + ++ +AG DIIT H E+S H+ R ++ I +MG K G+A+NP TP+
Sbjct: 62 KFDVHLMIERPELYLEEFVNAGADIITVHAEASIHLHRLIQQIKSMGVKAGLALNPATPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+L V+ ++DM+L+M+VNPGFGGQQ I+ +PKI +I + +EVDGG+ +
Sbjct: 122 EVLTYVLQDLDMVLLMSVNPGFGGQQFIQGVLPKIVALSTIIAQVNPGCLIEVDGGINTD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + +AGAD++V G++ F + + K L
Sbjct: 182 TISLVSRAGADIIVAGAAVFTKPDPVLAIKEL 213
>gi|294142772|ref|YP_003558750.1| ribulose-phosphate 3-epimerase [Shewanella violacea DSS12]
gi|293329241|dbj|BAJ03972.1| ribulose-phosphate 3-epimerase [Shewanella violacea DSS12]
Length = 224
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 142/227 (62%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GVTADIDVHLMVKPVDRMIVDFAKAGASIITFHPEATEHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ K LI + +VDGG
Sbjct: 120 GTPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVKQLIDASGYDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ FN+ Y +++++ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNKPD---YKAVIDEMRSELAKLE 223
>gi|120601764|ref|YP_966164.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris DP4]
gi|120561993|gb|ABM27737.1| ribulose-5-phosphate 3-epimerase [Desulfovibrio vulgaris DP4]
Length = 222
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 142/213 (66%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L++DF RL EE++ + AG K +H+DVMDG FVPNI++G VI LR S
Sbjct: 1 MILSPSLLSSDFGRLTEELAALEAAGVKWVHWDVMDGRFVPNITYGQPVISHLRKKSGLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + ++ A AG D++ H E++ H++R+L I +G K GVA+NP TP++
Sbjct: 61 FDVHLMVHEPERYLADFAKAGADMLVVHAEATNHLQRTLAEIRRLGCKAGVALNPHTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+ V++++DM+LIM+VNPGFGGQ+ + +T KIR+ +A++ R + ++VDGGV N
Sbjct: 121 VLDYVLEDVDMVLIMSVNPGFGGQKFLPATYRKIRELRAMLDARGLSAHIQVDGGVDPSN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+LV +GAD+LV GS+FF + D
Sbjct: 181 TAALVDSGADVLVSGSAFFGFPPYDQRLRAFED 213
>gi|90020393|ref|YP_526220.1| ribulose-5-phosphate 3-epimerase [Saccharophagus degradans 2-40]
gi|89949993|gb|ABD80008.1| ribulose-5-phosphate 3-epimerase [Saccharophagus degradans 2-40]
Length = 228
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I PSIL+ADF+RLGEE+ + KAGA +HFDVMD +VPN++FG V ++LR+Y
Sbjct: 7 KRDFKIAPSILSADFARLGEEVDAVLKAGADFVHFDVMDNHYVPNLTFGPMVCKALRNYG 66
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + ADAG I+FHP++S H R+++ I +G K GV +NP
Sbjct: 67 ITAPIDVHLMVDPVDDLVKTFADAGATYISFHPDASRHADRTVKLIRDLGCKPGVVLNPA 126
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
+ ++ ++D++DM+L+M+VNPGFGGQ+ I T+ K+++A+A + + LEVDGGV
Sbjct: 127 VTLESVKHLLDQVDMLLLMSVNPGFGGQKFIPYTLDKLKEARARLDDAGLEARLEVDGGV 186
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ NI + +AGAD V GS+ F + S K++ D
Sbjct: 187 STANIADVARAGADTFVAGSAIFGAQNYESVIKQMRD 223
>gi|332289736|ref|YP_004420588.1| ribulose-phosphate 3-epimerase [Gallibacterium anatis UMN179]
gi|330432632|gb|AEC17691.1| ribulose-phosphate 3-epimerase [Gallibacterium anatis UMN179]
Length = 224
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+A+ + LG+++ + AGA IHFDVMD +VPN++FG V ++LR
Sbjct: 1 MKPYL-IAPSILSANLAHLGDDVKKVLAAGADVIHFDVMDNHYVPNLTFGPAVCQALRDD 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S HI RSL+ I +G + G+ NP
Sbjct: 60 GISAPIDVHLMVKPVDRLIPDFAKAGATSITFHPEASEHIDRSLQLIKDLGCQAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGG 177
TP+ L+ V+D++D+ILIM+VNPGFGGQ I + K+RQA+ I R I LEVDGG
Sbjct: 120 ATPLHYLDHVMDKLDIILIMSVNPGFGGQSFIPHALEKLRQARQRIISSGRDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + +AGAD+ V GS+ F Q + + +
Sbjct: 180 VKVDNIADIARAGADMFVAGSAIFGQPDYQQVIQAMRE 217
>gi|329297337|ref|ZP_08254673.1| Rpe [Plautia stali symbiont]
Length = 227
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 137/219 (62%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PSILAADF+RLGE+ + +AG +HFDVMD +VPN++ G V+++LR Y
Sbjct: 1 MKQFLLAPSILAADFARLGEDTAKALEAGGDVVHFDVMDNHYVPNLTMGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +++ I A AG ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVNALIPEFAKAGASFITFHPEASEHVDRTLQLIKENGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFG Q I T+ K+R+A+ I + + EVDGGV
Sbjct: 121 TPLSYLDYVMDKLDIILLMSVNPGFGSQSFIPGTLDKLREARRRIDQSGYQIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F Y K +++++
Sbjct: 181 KIDNIGQIAAAGADMFVAGSAIFGHPD---YKKVIDEMR 216
>gi|299065573|emb|CBJ36744.1| D-ribulose-5-phosphate 3-epimerase [Ralstonia solanacearum CMR15]
Length = 242
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 135/227 (59%), Gaps = 12/227 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS--- 61
+I PSIL+ADF+RLGEE+ + + GA IHFDVMD +VPN++ G V ++R ++
Sbjct: 10 FRIAPSILSADFARLGEEVRRVIEGGADWIHFDVMDNHYVPNLTVGPLVCEAIRPHAQRD 69
Query: 62 --DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +D I A AG D+ITFHPE+S HI RSL I G K G+ NP
Sbjct: 70 GKPVPIDVHLMVRPVDRIIPDFAKAGADLITFHPEASEHIDRSLALIRDQGCKAGLVFNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLE 173
TP+ L+ V+D +DM+LIM+VNPGFGGQ I + K+R + + R I LE
Sbjct: 130 ATPLHYLDHVMDRLDMVLIMSVNPGFGGQSFIPEALTKLRAVRQKLDAYADKTGRRILLE 189
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKS 219
+DGGV + NI + +AGAD V GS+ F + + Y + L+ +
Sbjct: 190 IDGGVKADNIAEIARAGADTFVAGSAVFGKPDADGGYRGTVGALRSA 236
>gi|325856684|ref|ZP_08172322.1| ribulose-phosphate 3-epimerase [Prevotella denticola CRIS 18C-A]
gi|325483398|gb|EGC86373.1| ribulose-phosphate 3-epimerase [Prevotella denticola CRIS 18C-A]
Length = 227
Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADF L +E+ I ++ A +H DVMDG FVPNISFG VI+++
Sbjct: 4 IVSPSLLSADFLHLDKEVEMINESEADWLHMDVMDGVFVPNISFGFPVIKAVGQACRKPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +++I ADAG I+ H E+ H+ R+L+ I A G K GV +NP TPV +
Sbjct: 64 DVHLMIVHPENYIQQTADAGAAIMNVHYEACVHLHRTLQAIRAAGMKAGVTLNPSTPVNV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
LED+I +ID++ +M+VNPGFGGQ+ IE +I K+++ + LI + S +EVDGGV +
Sbjct: 124 LEDIIGDIDIVQLMSVNPGFGGQKFIEHSIRKVQRLRQLIERESSRALIEVDGGVQAETA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV AG D+LV GS F + L L+K
Sbjct: 184 PRLVDAGVDILVSGSYVFKADDPKAAIHVLKGLRK 218
>gi|161075791|gb|ABX56643.1| ribulose-phosphate 3-epimerase [Methylacidiphilum infernorum V4]
Length = 232
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 9/224 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL--- 57
M I+I PSIL+ADF+RL +AGA +H DVMDG FVPNI+ G ++ +L
Sbjct: 1 MRKEIKIAPSILSADFARLEAHAKEALEAGADWLHIDVMDGHFVPNITIGPLIVEALNPL 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ + + D HLMI + D +I A AG DIIT H E+ PH+ R+++ IH +G K GV +
Sbjct: 61 KRVTGTTLDVHLMIENPDRYIPDFARAGADIITVHVETCPHLHRTVQLIHDLGVKAGVTL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVD 175
NP TP+ LE+++ D+ L+M+VNPGFGGQ+ I ++ K+ + + ++ + LE+D
Sbjct: 121 NPATPLVTLEEILPYADLFLVMSVNPGFGGQEYIPTSTNKVARLREMLDRVDSRAWLEID 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GGV N +V AGAD+LV GS+ F + + L++S
Sbjct: 181 GGVKPSNAAEIVLAGADVLVAGSAVFKG----QVKENILKLRES 220
>gi|94985420|ref|YP_604784.1| ribulose-phosphate 3-epimerase [Deinococcus geothermalis DSM 11300]
gi|94555701|gb|ABF45615.1| Ribulose-phosphate 3-epimerase [Deinococcus geothermalis DSM 11300]
Length = 229
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 89/216 (41%), Positives = 135/216 (62%), Gaps = 4/216 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++ PS+LA DF++LGEE+ I A A+ H DVMDG FVPNISFG ++ + R S
Sbjct: 13 ARRVKLAPSLLACDFTQLGEELKRI--ASAEYAHVDVMDGLFVPNISFGLPILSAARRAS 70
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + ++ A+AG D +T H E++PHI R++ I +GK+ GV +NP T
Sbjct: 71 SLFMDVHLMIERPERYLRDFAEAGADGLTVHVEATPHIHRAVGLIRELGKRAGVTLNPGT 130
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
P+ + V+ ++D++L+M+VNPGFGGQ+ I ++ ++R + + + LEVDGG+T
Sbjct: 131 PLEAVRPVLPDVDLVLVMSVNPGFGGQKFIPESVERVRTLRRWLDELGSAAELEVDGGIT 190
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+N + L AGA +LV GSS F +G RL +
Sbjct: 191 PQNARLLADAGATVLVAGSSVFGPQGPEVGLARLRE 226
>gi|190151175|ref|YP_001969700.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307257919|ref|ZP_07539673.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307262313|ref|ZP_07543961.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307264524|ref|ZP_07546108.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189916306|gb|ACE62558.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306863566|gb|EFM95495.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867976|gb|EFM99804.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870123|gb|EFN01883.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 224
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 143/222 (64%), Gaps = 7/222 (3%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I PSIL+AD +RLGE+++ + KAG IHFDVMD FVPN++FG + ++LR
Sbjct: 1 MARQPFLIAPSILSADLARLGEDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRD 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
Y + D HLM+ ++ I A AG + ITFHPE++ HI R+L+ I G K+G+ N
Sbjct: 61 YGITAEIDVHLMVKPVERLIPDFAKAGANYITFHPEATNHIDRTLQMIRDHGCKSGLVFN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDG 176
P TP++ L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+++A+ I K I LE+DG
Sbjct: 121 PATPLSYLDYVMDKVDMILLMGVNPGFGGQKFIPATLEKLQEARRRIDKSGYPIRLEIDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GV NI + AGAD V GS+ F+Q Y ++ +++
Sbjct: 181 GVKIDNIAEIAAAGADTFVAGSAIFDQPN---YKAVIDQMRR 219
>gi|189218621|ref|YP_001939262.1| Pentose-5-phosphate-3-epimerase [Methylacidiphilum infernorum V4]
gi|189185479|gb|ACD82664.1| Pentose-5-phosphate-3-epimerase [Methylacidiphilum infernorum V4]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 9/224 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL--- 57
M I+I PSIL+ADF+RL +AGA +H DVMDG FVPNI+ G ++ +L
Sbjct: 4 MRKEIKIAPSILSADFARLEAHAKEALEAGADWLHIDVMDGHFVPNITIGPLIVEALNPL 63
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ + + D HLMI + D +I A AG DIIT H E+ PH+ R+++ IH +G K GV +
Sbjct: 64 KRVTGTTLDVHLMIENPDRYIPDFARAGADIITVHVETCPHLHRTVQLIHDLGVKAGVTL 123
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVD 175
NP TP+ LE+++ D+ L+M+VNPGFGGQ+ I ++ K+ + + ++ + LE+D
Sbjct: 124 NPATPLVTLEEILPYADLFLVMSVNPGFGGQEYIPTSTNKVARLREMLDRVDSRAWLEID 183
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GGV N +V AGAD+LV GS+ F + + L++S
Sbjct: 184 GGVKPSNAAEIVLAGADVLVAGSAVFKG----QVKENILKLRES 223
>gi|222151055|ref|YP_002560209.1| ribulose-5-phosphate 3-epimerase [Macrococcus caseolyticus
JCSC5402]
gi|222120178|dbj|BAH17513.1| ribulose-5-phosphate 3-epimerase [Macrococcus caseolyticus
JCSC5402]
Length = 216
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 133/216 (61%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ +F L EE++ + AGA +HFDVMDG FVPNISF V++ +RS +D
Sbjct: 1 MKVAPSLLSCNFLELKEEVAALHAAGADYLHFDVMDGQFVPNISFAFPVLQQIRSITDLT 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I ADAG DIIT H ES+ HI R+L+ I GKK G+ +NP TPVA
Sbjct: 61 IDTHLMIQDPERYIQAFADAGSDIITVHVESTKHIHRALQMIRNAGKKAGITLNPGTPVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ V+D +D++L+MTVNPGFGGQ I+S + KIR + + +EVDGGV
Sbjct: 121 SIIPVLDMVDLVLVMTVNPGFGGQSFIKSGVDKIRFLNEYRNEYDLSYEIEVDGGVNEDT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AGAD+LV GS FF + K L ++
Sbjct: 181 AILCKAAGADVLVAGSYFFKHEDYKIPVKLLKGDRE 216
>gi|291522857|emb|CBK81150.1| ribulose-phosphate 3-epimerase [Coprococcus catus GD/7]
Length = 222
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 100/203 (49%), Positives = 143/203 (70%), Gaps = 2/203 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++ PSIL+ADF RLGE+I +AGA IH DVMDG FVPNISFG VI+S+R SD
Sbjct: 3 ELKLSPSILSADFGRLGEDIKTADQAGADYIHIDVMDGAFVPNISFGIPVIKSIRKCSDK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI D I A AG DII H E+ H+ R+++ IH++G K GVA+NP TP+
Sbjct: 63 VFDVHLMIEHPDQLIPEFAKAGADIIVVHAEACKHLHRTIQLIHSLGVKAGVALNPATPL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++L+ V++++DMIL+MTVNPGFGGQ I + KIR + ++ ++ + +E+DGGV ++
Sbjct: 123 SVLDYVLEDLDMILLMTVNPGFGGQSYIPAMTEKIRTLRHILEEKGLQTDIEIDGGVDTK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
N++ +++AGA++LV GS F
Sbjct: 183 NLRMVIEAGANVLVSGSKIFGGD 205
>gi|165977257|ref|YP_001652850.1| D-ribulose-phosphate-3 epimerase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|165877358|gb|ABY70406.1| D-ribulose-phosphate-3 epimerase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 224
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 142/222 (63%), Gaps = 7/222 (3%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I PSIL+AD +RLGE+++ + KAG IHFDVMD FVPN++FG + ++LR
Sbjct: 1 MARQPFLIAPSILSADLARLGEDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRD 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
Y + D HLM+ ++ I A AG + ITFHPE++ HI R+L+ I G K+G+ N
Sbjct: 61 YGITAEIDVHLMVKPVERLIPDFAKAGANYITFHPEATDHIDRTLQMIRDHGCKSGLVFN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDG 176
P TP++ L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+++A+ I K I LE+DG
Sbjct: 121 PATPLSYLDYVMDKVDMILLMGVNPGFGGQKFIPATLEKLQEARRRIDKSGYPIRLEIDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GV NI + AGAD V GS+ F +Y ++ +++
Sbjct: 181 GVKIDNIAEIAAAGADTFVAGSAIF---DRPNYKAVIDQMRR 219
>gi|77165950|ref|YP_344475.1| ribulose-phosphate 3-epimerase [Nitrosococcus oceani ATCC 19707]
gi|254433715|ref|ZP_05047223.1| ribulose-phosphate 3-epimerase [Nitrosococcus oceani AFC27]
gi|76884264|gb|ABA58945.1| ribulose-5-phosphate 3-epimerase [Nitrosococcus oceani ATCC 19707]
gi|207090048|gb|EDZ67319.1| ribulose-phosphate 3-epimerase [Nitrosococcus oceani AFC27]
Length = 223
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
+I PSIL+ADF+RLGEE++ + +AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 5 KIAPSILSADFARLGEEVTAVLEAGADMVHFDVMDNHYVPNLTIGPLVCEALRKHGITAD 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D A AG + ITFHPE+S HI R+L+ I G K+G+ NP T +
Sbjct: 65 IDVHLMVKPVDRIAPDFAKAGANYITFHPEASEHIDRTLQLIRDEGCKSGLVFNPATSLD 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
L+ VID++DM+LIM+VNPGFGGQ+ I + + K+R+A+ +I I LE+DGG+ N
Sbjct: 125 YLKYVIDKVDMVLIMSVNPGFGGQKFIPTALDKLREARRIIDASGYPIRLEIDGGIKIDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ + AGAD V GS+ F + + +
Sbjct: 185 IQQVAMAGADTFVAGSAIFQSENYKTTIGEMRA 217
>gi|300728231|ref|ZP_07061599.1| ribulose-phosphate 3-epimerase [Prevotella bryantii B14]
gi|299774466|gb|EFI71090.1| ribulose-phosphate 3-epimerase [Prevotella bryantii B14]
Length = 216
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 87/215 (40%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PS+L+A+F L ++ I ++ A +H D+MDG FVPNISFG V+ ++ Y
Sbjct: 2 KTIVSPSLLSANFIDLKSDVEMINRSEADWLHMDIMDGVFVPNISFGFPVLEAVGKYCQK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +++I+ +A +G ++ H E+ H+ R+++ IH G K GV +NP TPV
Sbjct: 62 PLDVHLMIVHPENYIDQVAKSGAMLMNVHYEACTHLHRTIQQIHDAGMKAGVTLNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LED+I ++D++L+M+VNPGFGGQ+ IE+TI K+++ + LI K +E+DGGV
Sbjct: 122 SVLEDIITDVDLVLLMSVNPGFGGQKFIENTIGKLKRLRELIDKSGSKALIEIDGGVNGE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV GS F + L +L
Sbjct: 182 TAPRLVKAGADVLVSGSYVFKAQTPEDVIHHLKEL 216
>gi|24371890|ref|NP_715932.1| ribulose-phosphate 3-epimerase [Shewanella oneidensis MR-1]
gi|24345716|gb|AAN53377.1|AE015477_7 ribulose-phosphate 3-epimerase [Shewanella oneidensis MR-1]
Length = 225
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 137/222 (61%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKK 218
V NI + AGAD+ V GS+ F + + + +L K
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKAVVDEMRVELAK 221
>gi|332523827|ref|ZP_08400079.1| ribulose-phosphate 3-epimerase [Streptococcus porcinus str.
Jelinkova 176]
gi|332315091|gb|EGJ28076.1| ribulose-phosphate 3-epimerase [Streptococcus porcinus str.
Jelinkova 176]
Length = 220
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 137/216 (63%), Gaps = 3/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +
Sbjct: 1 MTSH-KIAPSILAADYANFATELKRIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+ + + ++ A AG DI+T H ES+ HI +L+ I A G K G+ INP
Sbjct: 60 SKLVFDCHLMVINPERYVEAYAQAGADIMTIHVESTHHIHGALQKIRAAGMKAGLVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV+++E ++ +D +LIMTVNPGFGGQ I + K+++ + + + +EVDGGV
Sbjct: 120 TPVSVIEPLLSLVDQVLIMTVNPGFGGQAFIPECLDKVKKVVEMRQRAGLDFDIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I + +AGA++ V GS F +S + L
Sbjct: 180 DDKTIAACAKAGANVFVAGSYLFKADDLVSQVQTLR 215
>gi|307545970|ref|YP_003898449.1| ribulose-5-phosphate 3-epimerase [Halomonas elongata DSM 2581]
gi|307217994|emb|CBV43264.1| ribulose-5-phosphate 3-epimerase [Halomonas elongata DSM 2581]
Length = 232
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 98/224 (43%), Positives = 140/224 (62%), Gaps = 6/224 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P I PSIL+ADF+RLGEE+ ++ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 5 KPDYLIAPSILSADFARLGEEVDDVLASGADIVHFDVMDNHYVPNLTIGPMVCEALRRHG 64
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I DAG +TFHPE+S HI RSL+ I G K+G+ NP
Sbjct: 65 VTAPIDAHLMVKPVDRLIGDFIDAGASYVTFHPEASEHIDRSLQLIRDGGCKSGLVFNPA 124
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ V+D++DMIL+M+VNPGFGGQ + T+ K+R+A+ I R I LE+DGGV
Sbjct: 125 TPLSFLDHVMDKVDMILLMSVNPGFGGQSFLPGTLDKLREARRRIDASGRDIRLEIDGGV 184
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLKKS 219
NI + +AGAD V GS+ F + Y + D +++
Sbjct: 185 KIDNIAEIARAGADTFVAGSAVFKARNPEDPHRYDGVIEDFRRA 228
>gi|255525643|ref|ZP_05392576.1| Ribulose-phosphate 3-epimerase [Clostridium carboxidivorans P7]
gi|296185405|ref|ZP_06853815.1| ribulose-phosphate 3-epimerase [Clostridium carboxidivorans P7]
gi|255510629|gb|EET86936.1| Ribulose-phosphate 3-epimerase [Clostridium carboxidivorans P7]
gi|296050239|gb|EFG89663.1| ribulose-phosphate 3-epimerase [Clostridium carboxidivorans P7]
Length = 216
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADFS+LGE++ + K GA +H DVMDG FVPNISFG VI+S+R+ +
Sbjct: 2 IKLAPSILSADFSKLGEDVKALEKYGADWVHIDVMDGMFVPNISFGIPVIKSIRNITSLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + AG D+IT H E+ HI R++ I ++G K G+A+NP TPV
Sbjct: 62 FDVHLMIEEPARFVEDFVKAGADMITIHYETDRHIDRTVNYIKSLGAKVGIALNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I +DM+LIMTVNPGFGGQ+ I KI++ K L K +++ +EVDGG+ N
Sbjct: 122 SIKYLIPNLDMVLIMTVNPGFGGQKYINYCSEKIKELKELSNKFNKNLLIEVDGGIGKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
IKS+V+ GA+++V GS+ F K L
Sbjct: 182 IKSVVECGANVIVAGSAVFKDGKIEENIKILK 213
>gi|46580935|ref|YP_011743.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450355|gb|AAS97003.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234625|gb|ADP87479.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris RCH1]
Length = 222
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 142/213 (66%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L++DF RL EE++ + AG K +H+DVMDG FVPNI++G VI LR S
Sbjct: 1 MILSPSLLSSDFGRLTEELAALEAAGVKWVHWDVMDGRFVPNITYGQPVISHLRKKSGLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + ++ A AG D++ H E++ H++R+L I +G K GVA+NP TP++
Sbjct: 61 FDVHLMVHEPERYLADFAKAGADMLVVHAEATNHLQRTLAEIRRLGCKAGVALNPHTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+ V++++DM+LIM+VNPGFGGQ+ + +T KIR +A++ R + ++VDGGV N
Sbjct: 121 VLDYVLEDVDMVLIMSVNPGFGGQKFLPATYRKIRDLRAMLDARGLSAHIQVDGGVDPSN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+LV++GAD+LV GS+FF + D
Sbjct: 181 TAALVESGADVLVSGSAFFGFPPYDQRLRAFED 213
>gi|296875729|ref|ZP_06899794.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis ATCC
15912]
gi|296433299|gb|EFH19081.1| ribulose-phosphate 3-epimerase [Streptococcus parasanguinis ATCC
15912]
Length = 219
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 140/220 (63%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++++ PSIL+AD++ E+ + AGA H DVMDG FVPNISFGA V+ S+R +S
Sbjct: 1 MKTMKLAPSILSADYANFESELKRLEAAGADYAHIDVMDGHFVPNISFGAGVVESMRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+++ + HI A AG DII+ H E++PHI +L+ I G K V INP T
Sbjct: 61 KLVFDCHLMVTNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRQAGVKASVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV ++ V++ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+
Sbjct: 121 PVDSIKHVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELAALREEKGLDFDIEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++I +AGA++ V GS FN +R+ L+ +
Sbjct: 181 DQSISQAKEAGANVFVAGSYVFNG----DVNERVQTLRDA 216
>gi|288906190|ref|YP_003431412.1| ribulose-5-phosphate 3-epimerase [Streptococcus gallolyticus UCN34]
gi|306832233|ref|ZP_07465387.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|288732916|emb|CBI14495.1| ribulose-5-phosphate 3-epimerase [Streptococcus gallolyticus UCN34]
gi|304425672|gb|EFM28790.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 220
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ A AG DI+T H ES+ HI +L+ I A G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERYVDAFAQAGADIMTIHAESTLHIHGALQKIKAAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I + K+ + L ++ +EVDGGV + I
Sbjct: 125 IESVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVAKVAQLRDEKGYDFDIEVDGGVDNETI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ AGA++ V GS F + + L
Sbjct: 185 KACYDAGANVFVAGSYLFKASDLAAQVETLR 215
>gi|312865675|ref|ZP_07725899.1| ribulose-phosphate 3-epimerase [Streptococcus downei F0415]
gi|311098796|gb|EFQ57016.1| ribulose-phosphate 3-epimerase [Streptococcus downei F0415]
Length = 219
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ +E+ I + A +H D+MDG FVPNISFGADV+ SLR +S VF
Sbjct: 4 KIAPSILAADYANFAQELKRIDETSADYVHIDIMDGQFVPNISFGADVVASLRKHSKLVF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +++ A AG DI+T H E+ HI +L+ I G K GV INP TPV+
Sbjct: 64 DCHLMVVEPERYVDAFAQAGADIMTIHVEAIQHIHGALQKIKKAGLKAGVVINPGTPVSA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE +++ +D +LIMTVNPGFGGQ I + K+++ + + +EVDGGV + I
Sbjct: 124 LEPILNLVDQVLIMTVNPGFGGQAFIPEMLEKVKKVATWREEAGYNFDIEVDGGVDDKTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K+ AGA++ V GS F S + L D
Sbjct: 184 KACKDAGANVFVAGSYLFKADDLASQVQTLRD 215
>gi|257465273|ref|ZP_05629644.1| ribulose-phosphate 3-epimerase [Actinobacillus minor 202]
gi|257450933|gb|EEV24976.1| ribulose-phosphate 3-epimerase [Actinobacillus minor 202]
Length = 224
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 137/215 (63%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PSIL+A+ ++LGE++ N+ +AG IHFDVMD FVPN++FG + ++LR Y
Sbjct: 5 PFLIAPSILSANLAKLGEDVKNVLEAGGDIIHFDVMDNHFVPNLTFGPAICQALRDYGIT 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ I+ I A AG + ITFHPE++ HI R+L+ I +G K G+ NP TP
Sbjct: 65 APIDVHLMVKPIERLIPEFAKAGANYITFHPEATDHIDRNLQLIRELGCKAGLVFNPATP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+R+ + I +S+ EVDGGV
Sbjct: 125 LHYLDYVMDKVDMILLMGVNPGFGGQKFIPATLNKLREVRKRIDASGLSIRLEVDGGVKI 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD V GS+ F+ + ++
Sbjct: 185 DNIAEIAEAGADTFVAGSAIFDLPDYKAVIDKMRA 219
>gi|254787077|ref|YP_003074506.1| ribulose-phosphate 3-epimerase [Teredinibacter turnerae T7901]
gi|237683827|gb|ACR11091.1| ribulose-phosphate 3-epimerase [Teredinibacter turnerae T7901]
Length = 234
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 137/212 (64%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+AD +RLGEE + + +AGA IHFDVMD +VPN++FG V +++R+Y +
Sbjct: 14 IAPSILSADLARLGEECTAVLEAGADMIHFDVMDNHYVPNMTFGPVVCKAIRNYGITAHI 73
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG ITFHPE++ H+ RSL I + G K G+ +NP TP++
Sbjct: 74 DVHLMVEPVDDLITRFAEAGASSITFHPEATRHVDRSLELIQSHGCKGGLVLNPATPLST 133
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+E ++++IDM+L+M+VNPGFGGQ I + K+ +A+AL+ + LEVDGGV NI
Sbjct: 134 IEWLVEKIDMLLLMSVNPGFGGQSFIPYVLQKVAKARALLDQHGSAARLEVDGGVKVDNI 193
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
L AGAD V GS+ F + ++ D
Sbjct: 194 AELAAAGADTFVAGSAIFGADDYRAVISQMRD 225
>gi|168274231|dbj|BAG09538.1| ribulose-phosphate 3-epimerase [Porphyra yezoensis]
Length = 274
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 96/222 (43%), Positives = 136/222 (61%), Gaps = 5/222 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + PSIL+ADF++LG E++ I AG +H DVMDG FVPNI+ G V+ +LR +D
Sbjct: 51 QVVVSPSILSADFAKLGAEVAAIDTAGCDWVHVDVMDGRFVPNITIGPLVVDALRPVTDK 110
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHP--ESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLMI + I AG DII+ H ES+ H+ R+L+ I +G GV +NP T
Sbjct: 111 VLDVHLMIVQPELLIPDFIKAGADIISVHAEGESTIHLHRTLKLIRDLGASAGVVLNPAT 170
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGV 178
PV++LE VI+ D++L+M+VNPGFGGQ IES K+ + +A+ ++ + +EVDGGV
Sbjct: 171 PVSVLEYVIELCDLVLVMSVNPGFGGQSFIESATDKVAEVRAMADRKGMKDLWIEVDGGV 230
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N +VQAGA+ LV GS+ FN K + + A
Sbjct: 231 KGDNAYKVVQAGANALVAGSAVFNSPDYAQAIKDIKAARAPA 272
>gi|126209282|ref|YP_001054507.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
L20]
gi|303251154|ref|ZP_07337338.1| D-ribulose-phosphate-3 epimerase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303252697|ref|ZP_07338859.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307246750|ref|ZP_07528818.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307248891|ref|ZP_07530902.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251425|ref|ZP_07533339.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253504|ref|ZP_07535374.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255734|ref|ZP_07537537.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260186|ref|ZP_07541895.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|126098074|gb|ABN74902.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302648436|gb|EFL78630.1| ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302650005|gb|EFL80177.1| D-ribulose-phosphate-3 epimerase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852325|gb|EFM84562.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306854586|gb|EFM86778.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856509|gb|EFM88651.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859005|gb|EFM91048.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861294|gb|EFM93285.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865731|gb|EFM97610.1| Ribulose-phosphate 3-epimerase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 224
Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 143/222 (64%), Gaps = 7/222 (3%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I PSIL+AD +RLGE+++ + KAG IHFDVMD FVPN++FG + ++LR
Sbjct: 1 MARQPFLIAPSILSADLARLGEDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRD 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
Y + D HLM+ ++ I A AG + ITFHPE++ HI R+L+ I G K+G+ N
Sbjct: 61 YGITAEIDVHLMVKPVERLIPDFAKAGANYITFHPEATDHIDRTLQMIRDHGCKSGLVFN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDG 176
P TP++ L+ V+D++DMIL+M VNPGFGGQ+ I +T+ K+++A+ I K I LE+DG
Sbjct: 121 PATPLSYLDYVMDKVDMILLMGVNPGFGGQKFIPATLEKLQEARRRIDKSGYPIRLEIDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GV NI + AGAD V GS+ F+Q Y ++ +++
Sbjct: 181 GVKIDNIAEIAAAGADTFVAGSAIFDQPN---YKAVIDQMRR 219
>gi|317154248|ref|YP_004122296.1| ribulose-phosphate 3-epimerase [Desulfovibrio aespoeensis Aspo-2]
gi|316944499|gb|ADU63550.1| ribulose-phosphate 3-epimerase [Desulfovibrio aespoeensis Aspo-2]
Length = 252
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 138/219 (63%), Gaps = 5/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ I PS+L++DFSRL EE+S++ +AG + +H+DVMDG FVPNI+FG VI R S+
Sbjct: 6 TVIISPSLLSSDFSRLAEELSSLEQAGVEWVHWDVMDGNFVPNITFGPPVIGRCRKVSNL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI +I DAG D+I H ES H+ R++ I +G + VAINP TP+
Sbjct: 66 FFDVHLMIDKPGRYIQEFVDAGADLICVHAESEIHLERTVAEIARLGARPAVAINPHTPL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++++ ++ ++ M+LIM+VNPGFGGQ I +I KIR +I ++VDGGVT
Sbjct: 126 SVVQHLLPQLYMVLIMSVNPGFGGQSFIPFSIDKIRGLSHMIKLTGADTLIQVDGGVTPD 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ L QAGAD+ V GS+FF Y +RL +A
Sbjct: 186 NVAELHQAGADVFVSGSAFFGHP---PYDERLKTFMAAA 221
>gi|284037427|ref|YP_003387357.1| ribulose-phosphate 3-epimerase [Spirosoma linguale DSM 74]
gi|283816720|gb|ADB38558.1| ribulose-phosphate 3-epimerase [Spirosoma linguale DSM 74]
Length = 223
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 139/224 (62%), Gaps = 3/224 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PS+LAADF+ L ++ I ++ A +HFDVMDG FVPNISFG +++++ +
Sbjct: 1 MTKPL-IAPSLLAADFANLQRDLDLINRSEADYLHFDVMDGVFVPNISFGFPLLKAVHEH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI+ D ++ A+ G I H E+ H+ R+L I +G + GVA+NP
Sbjct: 60 CQKPLDVHLMITDPDRYLEAFAEGGASTIHVHYEACSHLHRTLSRIRELGCQAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV+ L DV+++ID+ILIM+VNPGFGGQ I TI KI K + +EVDGGV
Sbjct: 120 TPVSGLVDVLEQIDVILIMSVNPGFGGQAFIPHTIQKIAGLKQFLQTNQCPALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ N ++L+ AGAD+LV GSS FN + +L + + ++A
Sbjct: 180 SLSNAQALLNAGADMLVAGSSVFNAPDPLVAITQLKNSRLPSMA 223
>gi|332300861|ref|YP_004442782.1| ribulose-phosphate 3-epimerase [Porphyromonas asaccharolytica DSM
20707]
gi|332177924|gb|AEE13614.1| ribulose-phosphate 3-epimerase [Porphyromonas asaccharolytica DSM
20707]
Length = 215
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADF L +EI+ I ++ +H DVMDG FVPN+SFG +I ++R
Sbjct: 3 IVSPSLLSADFLHLADEITMINESQCDWLHIDVMDGVFVPNLSFGFPIIEAIRPICQKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI I+ A G I+ H E PH+ R+LR I G + V +NP TPV +
Sbjct: 63 DVHLMIVEPWKFIDQFAKLGIYIMNVHYEVCPHLHRTLRAIREAGMRPAVTLNPHTPVEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L D++ E DM+L+M+VNPG+GGQ+ IE +I K+ + + +I ++ +S ++VDGGV
Sbjct: 123 LTDILCEADMVLLMSVNPGYGGQKFIEQSIRKVERLRKMIQEQGLSTLIQVDGGVNLETG 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ L++AGAD LV GS+ F +L+ L
Sbjct: 183 RQLIEAGADSLVAGSAVFKASSPQEMIAQLDAL 215
>gi|313888437|ref|ZP_07822104.1| ribulose-phosphate 3-epimerase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845466|gb|EFR32860.1| ribulose-phosphate 3-epimerase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 214
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L+ADF+ L +EI + + +H D+MDG +VPNIS+G +++SLR +D F
Sbjct: 1 MISPSLLSADFTNLEKEIKILKEEKVDFLHLDIMDGNYVPNISYGPGIVKSLRPLTDIPF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI ++ I +AG DIIT HP ++ H+ R+L I + G K G+A+NP + +
Sbjct: 61 DTHLMIERPENFIEDFKNAGSDIITIHPSTTKHLDRTLSLIKSHGMKAGLALNPSDSLEV 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ +D++D++L+M+VNPGFGGQ+ I S + KI + K +I +R++ +EVDGGV N
Sbjct: 121 LDYTLDKLDLVLVMSVNPGFGGQKFIPSALRKISEVKKMIEERNLKTLIEVDGGVKLDNA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K ++ AGAD+LV GS+ F + K +L
Sbjct: 181 KEVLAAGADILVAGSAIFQKDKTRENIKVFKEL 213
>gi|291541740|emb|CBL14850.1| ribulose-5-phosphate 3-epimerase [Ruminococcus bromii L2-63]
Length = 215
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 130/215 (60%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ DFS++GEEI + AGA +H DVMDG FVPNI+FGA VI+++R +S+
Sbjct: 1 MKIAPSLLSCDFSKMGEEIERMDLAGADWMHLDVMDGHFVPNITFGAPVIKAVRKFSNRP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS +I+ ADAG DIITFH E I ++ I + G K G+ + P TP
Sbjct: 61 FDVHLMISDPLKYIDDFADAGADIITFHVECDSDIDDTIAKIKSRGIKPGLVLKPNTPAW 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+ ++++D++L+MTV PGFGGQ + +PK+++ K +R ++ +E DGG+
Sbjct: 121 TVFPYLEKLDLVLVMTVEPGFGGQSFMPEMMPKVKEIKRECQRRGLNNILIEADGGIGRD 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I+ +AG D+ V G++ F +
Sbjct: 181 TIEQASEAGVDVCVAGTAVFRAADPAKAIELFKSF 215
>gi|306834358|ref|ZP_07467475.1| ribulose-phosphate 3-epimerase [Streptococcus bovis ATCC 700338]
gi|304423531|gb|EFM26680.1| ribulose-phosphate 3-epimerase [Streptococcus bovis ATCC 700338]
Length = 220
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ A AG DI+T H ES+ HI +L+ I A G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERYVDAFAQAGADIMTIHAESTLHIHGALQKIKAAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I T+ K+ + L ++ +EVDGGV ++ I
Sbjct: 125 IESVLSLVDQVLIMTVNPGFGGQAFIPETLEKVAKVAQLRDEKGYDFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ AGA++ V GS F + + L
Sbjct: 185 KACYDAGANVFVAGSYLFKASDLAAQVETLR 215
>gi|118442866|ref|YP_878310.1| ribulose-phosphate 3-epimerase [Clostridium novyi NT]
gi|118133322|gb|ABK60366.1| ribulose-phosphate 3-epimerase [Clostridium novyi NT]
Length = 216
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 141/216 (65%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFS LGE+I I K GA IH DVMDG FVPNISFG +++S+R+ +
Sbjct: 2 VKLAPSILSADFSNLGEDIKKIDKYGADVIHIDVMDGMFVPNISFGMPIMKSIRNITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ A G DIIT H E+ H+ R++ I + G K G+A+NP TPV
Sbjct: 62 FDVHLMIEDPARYVEDFAKNGADIITVHYEADKHLDRTINYIKSFGVKAGIALNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I +DM+LIM+VNPGFGGQ+ IE KIR+ K L + + + +EVDGGV + N
Sbjct: 122 SIKHLIGIVDMVLIMSVNPGFGGQKYIEYCSDKIREVKKLAEEFNKDLLIEVDGGVGANN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V+ GA+++V GS+ F K + +LK+
Sbjct: 182 IKKVVECGANVIVAGSAVFKNG---EIEKNIKELKE 214
>gi|313673238|ref|YP_004051349.1| ribulose-5-phosphate 3-epimerase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939994|gb|ADR19186.1| ribulose-5-phosphate 3-epimerase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 213
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADFS+LG+E+ +I ++GA IH DVMDG FVPNI+ G VI ++RS +
Sbjct: 1 MIVAPSILSADFSKLGQEVIDIDRSGADWIHIDVMDGLFVPNITIGPLVIEAIRSKTTKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + +I+ A AG DIIT H ES+ H+ R + I G+K GV+INP TPV
Sbjct: 61 FDVHLMIVNPEKYIDQFATAGSDIITVHYESTVHLHRVIHQIKDTGRKAGVSINPSTPVI 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L++++ +D++LIM+VNPGFGGQ+ IES+I KI++ K +I ++ +EVDGGV+ +N
Sbjct: 121 MLDEILPYLDLVLIMSVNPGFGGQKFIESSISKIKKLKEMIVSANLQTLIEVDGGVSDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ L AG D++V G+ F S ++L
Sbjct: 181 IRLLKDAGCDVVVAGNYIFKSNDYESAIRKLK 212
>gi|225869786|ref|YP_002745733.1| ribulose-phosphate 3-epimerase [Streptococcus equi subsp. equi
4047]
gi|225699190|emb|CAW92446.1| putative ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
equi 4047]
Length = 220
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 135/216 (62%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S++I PSILAAD++ E++ I K A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSSLKIAPSILAADYACFAAELARIEKTDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + + ++ A AG DI+T H ES+ H +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVNPERYVEAFAQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV+ +E ++ +D +LIMTVNPGFGGQ I + K+ + +R + +EVDGGV
Sbjct: 121 PVSAVEPLLSLVDQVLIMTVNPGFGGQAFIPECLEKVAAIAKMRDERGLSFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ I++ QAGA++ V GS F + + L
Sbjct: 181 DKTIRACYQAGANVFVAGSYLFKAADLAAQVQTLRA 216
>gi|298384887|ref|ZP_06994446.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 1_1_14]
gi|298262031|gb|EFI04896.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 1_1_14]
Length = 216
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 132/218 (60%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L +I I ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFGYLARDIEMINRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLMI + + I + G + H E+ H+ R ++ I G + V INP
Sbjct: 59 TDKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACTHLHRVIQQIKEAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIQDVYMVLIMSVNPGFGGQKFIEYSVEKVRELRALIERAGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F ++L+ L
Sbjct: 179 NLETGARLVEAGADVLVAGNAVFGAPDPEEMIRQLHKL 216
>gi|169335087|ref|ZP_02862280.1| hypothetical protein ANASTE_01494 [Anaerofustis stercorihominis DSM
17244]
gi|169257825|gb|EDS71791.1| hypothetical protein ANASTE_01494 [Anaerofustis stercorihominis DSM
17244]
Length = 215
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 142/218 (65%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSI ADF RL E+I + + +H DVMDG +VPNI+FG D I LR ++D
Sbjct: 2 VKLSPSIFGADFGRLNEQIKAVEDCNVEMLHIDVMDGNYVPNIAFGPDQIAMLRPHTDLF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M++ D +I I AG +IT H E++ H+ RSL I + G K GV +NP TP
Sbjct: 62 FDVHMMVTEPDRYIERIVKAGAQMITVHAEATTHLHRSLMLIKSFGVKCGVVLNPATPPD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+L+ V+D+IDM+L+MTVNPG GG + I K+R+ K +IG R I ++VDGGV + N+K
Sbjct: 122 VLKYVLDDIDMVLVMTVNPGGGGGAFNPTMIEKVREIKEMIGDRDIDIQVDGGVNADNVK 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
SLV AGA+++V GS F AK L+DL+K+A A
Sbjct: 182 SLVDAGANVIVAGSFAFTG----DVAKNLDDLRKAADA 215
>gi|319428296|gb|ADV56370.1| ribulose-phosphate 3-epimerase [Shewanella putrefaciens 200]
Length = 224
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD+ V GS+ F + + +
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKAVVDEMRA 217
>gi|332977863|gb|EGK14613.1| ribulose-phosphate 3-epimerase [Psychrobacter sp. 1501(2011)]
Length = 231
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 149/219 (68%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGEE+ N+ K+GA +HFDVMD +VPN++FG+ + +LR Y
Sbjct: 5 EKPYLIAPSILSADFARLGEEVENVLKSGADVVHFDVMDNHYVPNLTFGSMICNALRDYG 64
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D+ D HLM+S +DS I +AG IITFHPE++ HI RSL+ I G K G+ +NP
Sbjct: 65 IDAPIDVHLMVSPVDSMIEQFLEAGASIITFHPEATNHIDRSLQMIKDGGAKCGLVLNPA 124
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ V+D++D IL+M+VNPGFGGQ IE T+ KI+Q + I R I LEVDGGV
Sbjct: 125 TPLHHLDYVMDKVDQILLMSVNPGFGGQSFIEGTLDKIKQVRQRIDASGREIRLEVDGGV 184
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ NI+++ +AGAD+ V GS+ FNQ Y + ++ ++
Sbjct: 185 KASNIRAIAEAGADMFVAGSAIFNQPD---YKQAIDAMR 220
>gi|262281835|ref|ZP_06059604.1| ribulose-phosphate 3-epimerase [Streptococcus sp. 2_1_36FAA]
gi|262262289|gb|EEY80986.1| ribulose-phosphate 3-epimerase [Streptococcus sp. 2_1_36FAA]
Length = 219
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 135/217 (62%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+AD++ E+ + AGA H DVMDG FVPNI+FGA V+ S+R +
Sbjct: 1 MT-QFKISPSILSADYANFESELKRLEAAGADYAHIDVMDGHFVPNITFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+++ + HI AG DIIT H E++PHI +L+ I A G K GV INP
Sbjct: 60 SKLVFDCHLMVTNPEKHIEDFVRAGADIITIHVEATPHIHGALQQIRAAGVKAGVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV ++ V+ +D +L+MTVNPGFGGQ + T+ K+ + +L + + +EVDGG+
Sbjct: 120 TPVQAIKHVLGLVDQVLVMTVNPGFGGQAFLPETLVKVSELASLREQEQLQFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ IK +AGA++ V GS F + L +
Sbjct: 180 DNQTIKLAKEAGANVFVAGSYVFKG-DVDHQVQTLKE 215
>gi|33594166|ref|NP_881810.1| ribulose-phosphate 3-epimerase [Bordetella pertussis Tohama I]
gi|33598644|ref|NP_886287.1| ribulose-phosphate 3-epimerase [Bordetella parapertussis 12822]
gi|33603596|ref|NP_891156.1| ribulose-phosphate 3-epimerase [Bordetella bronchiseptica RB50]
gi|33564241|emb|CAE43532.1| ribulose-phosphate 3-epimerase [Bordetella pertussis Tohama I]
gi|33574773|emb|CAE39433.1| ribulose-phosphate 3-epimerase [Bordetella parapertussis]
gi|33577721|emb|CAE34986.1| ribulose-phosphate 3-epimerase [Bordetella bronchiseptica RB50]
gi|332383581|gb|AEE68428.1| ribulose-phosphate 3-epimerase [Bordetella pertussis CS]
Length = 245
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 136/218 (62%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 18 STRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPHVQV 77
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + A AG ++ITFHPE+S H+ R+L I G K G+ NP TP+
Sbjct: 78 PIDVHLMVEPVDEIVPQFAKAGANVITFHPEASRHVDRTLALIRDHGCKAGLVFNPATPL 137
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
++ V+D++D++L+M+VNPGFGGQ I +T+ K+R A+A I + + I LEVDGG
Sbjct: 138 HYMDYVMDKLDVVLLMSVNPGFGGQAFIPATLAKLRDARARIDRWRAAGGQPILLEVDGG 197
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD V GS+ F + +L
Sbjct: 198 VKVDNIAEIRAAGADTFVAGSAIFGKPDYAQVIGQLRA 235
>gi|282880287|ref|ZP_06289001.1| ribulose-phosphate 3-epimerase [Prevotella timonensis CRIS 5C-B1]
gi|281305789|gb|EFA97835.1| ribulose-phosphate 3-epimerase [Prevotella timonensis CRIS 5C-B1]
Length = 218
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 92/217 (42%), Positives = 131/217 (60%), Gaps = 2/217 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + PS+L+ADF+ L +I I ++ A +H DVMDG FVPNISFG VI ++
Sbjct: 1 MKKLTLVSPSLLSADFTNLQADIDMINQSDADWLHLDVMDGVFVPNISFGFPVIHAVSKI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D H MI + +I A+AG +++ E+ H+ R+++ IH G K GV +NP
Sbjct: 61 CQKPLDVHFMIVQPERYIQQAAEAGATLMSVQYEACTHLHRTIQQIHDAGMKAGVVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LED+I ++D++L+M+VNPGFGGQ IE+TI K+++ + LI + +EVDGGV
Sbjct: 121 TPVHLLEDIITDVDLVLLMSVNPGFGGQAFIENTIAKVKRLRKLIDESGAQALIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
LVQAGAD+LV GS F K I+ L
Sbjct: 181 QEDTAPRLVQAGADVLVSGSYVFKAKDPIATIHWLKQ 217
>gi|325979159|ref|YP_004288875.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325179087|emb|CBZ49131.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 220
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ A AG DI+T H ES+ HI +L+ I A G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERYVDAFAQAGADIMTIHAESTLHIHGALQKIKAAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I + K+ + L ++ +EVDGGV ++ I
Sbjct: 125 IESVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVAKVAQLRDEKGYDFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ AGA++ V GS F + + L
Sbjct: 185 KACYDAGANVFVAGSYLFKASDLAAQVETLR 215
>gi|152977904|ref|YP_001343533.1| ribulose-phosphate 3-epimerase [Actinobacillus succinogenes 130Z]
gi|150839627|gb|ABR73598.1| Ribulose-phosphate 3-epimerase [Actinobacillus succinogenes 130Z]
Length = 224
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 142/226 (62%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLGE++ N+ K GA IHFDVMD +VPN++FGA V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGEDVENVLKCGADLIHFDVMDNHYVPNLTFGAPVCKALREY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM + +DS + A AG ITFH E+S HI R+L+ I G + G+ NP
Sbjct: 60 GITAPIDVHLMATPVDSLVVDFAKAGATSITFHGEASLHIDRTLQLIRDQGCRAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++DMIL+M+VNPGFGGQ I +T+ K+RQ + I + EVDGG
Sbjct: 120 ATPLNYLDFVMDKLDMILLMSVNPGFGGQSFIPATLDKLRQVRQRIDDSGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD+ V GS+ F+ Y K ++D++ +
Sbjct: 180 VKIDNIAQIAAAGADMFVAGSAIFDAPD---YQKVIDDMRAELAKV 222
>gi|124268650|ref|YP_001022654.1| ribulose-5-phosphate 3-epimerase [Methylibium petroleiphilum PM1]
gi|124261425|gb|ABM96419.1| ribulose-5-phosphate 3-epimerase [Methylibium petroleiphilum PM1]
Length = 229
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 141/225 (62%), Gaps = 10/225 (4%)
Query: 1 MTPS--IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+P +I PS+L+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +LR
Sbjct: 1 MSPQRHFRIAPSLLSADFARLGEEVKDVIAAGADWIHFDVMDNHYVPNLTFGPMVCEALR 60
Query: 59 SYSDS------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
++ + D HLM+ +D+ A AG D+++FHP++S H+ R+L+ I G +
Sbjct: 61 KHAVTAAGVRVPIDVHLMVQPVDALAQAFAKAGADLVSFHPDASTHVDRTLQLIKDAGCQ 120
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSI 170
G+ NP + +LE VID++D++L+M+VNPGFGGQ I ST+ K+ + + LI R I
Sbjct: 121 AGLVFNPAASLDVLEWVIDKVDLVLLMSVNPGFGGQSFIPSTLKKLARVRQLIDASGRDI 180
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
LEVDGG+ + NI++ AGAD V GS+ F Q + +
Sbjct: 181 RLEVDGGIKTDNIRAAADAGADTFVAGSAIFGQPDYKAVIDAMRA 225
>gi|291563551|emb|CBL42367.1| ribulose-phosphate 3-epimerase [butyrate-producing bacterium SS3/4]
Length = 221
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 139/215 (64%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADFS+LGE++ ++ AGA+ IH DVMDG FVP+ISFG VI SLR +D VF
Sbjct: 3 ILAPSILSADFSKLGEDVKTVSDAGAQYIHLDVMDGAFVPSISFGMPVISSLRKTTDRVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ ++N + AG DII H E+ H+ R++ I G + VA+NP TPV
Sbjct: 63 DVHMMVEEPGRYVNDVRKAGADIICVHQEACLHLDRTINQIKETGARAAVALNPATPVET 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L ++ E DM LIM+VNPGFGGQ+ I T+ KI++ + ++ + + +EVDGGV + N+
Sbjct: 123 LSCILKEADMFLIMSVNPGFGGQKFIPYTLEKIKKLRGMLNEAGLTTDIEVDGGVNAANV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ ++ AGA+++V GS+ F + + L ++
Sbjct: 183 REVLDAGANVIVAGSAVFKNDAAANTKEFLKIFEE 217
>gi|86132635|ref|ZP_01051228.1| ribulose-phosphate 3-epimerase [Dokdonia donghaensis MED134]
gi|85816877|gb|EAQ38062.1| ribulose-phosphate 3-epimerase [Dokdonia donghaensis MED134]
Length = 219
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PSILAADF+ L +I I + A H D+MDG FVPNISFG V+R + +
Sbjct: 1 MSSKL-IAPSILAADFANLQRDIEMINNSDADWFHIDIMDGVFVPNISFGMPVLRDITKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D +I AD G DI+T H E+ H+ R+L+ I G K GVA+NP
Sbjct: 60 ASKPIDVHLMIVDPDRYIQTFADLGADILTVHYEACTHLHRTLQAIKDAGMKAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+++LEDVI +ID++ +M+VNPGFGGQ+ IE+T K+ +LI ++ + +E+DGGV
Sbjct: 120 TPISLLEDVIRDIDLVCVMSVNPGFGGQKFIENTYDKVAALNSLIIRKGATTLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
T++N L++ GAD+LV GS F + ++ K L
Sbjct: 180 TNKNASQLIEKGADVLVAGSYVFKSENPVTTIKNLKS 216
>gi|126176292|ref|YP_001052441.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS155]
gi|160877298|ref|YP_001556614.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS195]
gi|217975142|ref|YP_002359893.1| Ribulose-phosphate 3-epimerase [Shewanella baltica OS223]
gi|125999497|gb|ABN63572.1| ribulose-5-phosphate 3-epimerase [Shewanella baltica OS155]
gi|160862820|gb|ABX51354.1| Ribulose-phosphate 3-epimerase [Shewanella baltica OS195]
gi|217500277|gb|ACK48470.1| Ribulose-phosphate 3-epimerase [Shewanella baltica OS223]
gi|315269503|gb|ADT96356.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS678]
Length = 224
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AG +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCQALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKECGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD+ V GS+ F + + +
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKTVVDEMRA 217
>gi|149195070|ref|ZP_01872162.1| ribulose-phosphate 3-epimerase [Caminibacter mediatlanticus TB-2]
gi|149134783|gb|EDM23267.1| ribulose-phosphate 3-epimerase [Caminibacter mediatlanticus TB-2]
Length = 212
Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 134/215 (62%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF +L EE+ + +AGA IH DVMDG FVPN++ G ++ ++ S
Sbjct: 1 MKIAPSILSADFGKLAEEVKAVCEAGADFIHVDVMDGHFVPNMTMGPMIVEAVSKASTKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+ +I +++ A + ITFH E H+ + ++ I + GV +NP TPV
Sbjct: 61 LDIHFMVENIPFFVDMYAHIKPEFITFHIEEEKHVNKVIQQIRNYDIRPGVVLNPATPVC 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+LE ++ ++DM+L+M+VNPGFGGQ+ I S I KI++ + L K+ ++ +EVDGGV +N
Sbjct: 121 LLEYIVADVDMVLLMSVNPGFGGQKFIPSVIDKIKELRELAEKKNPNLLIEVDGGVNDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K L +AGAD+LV GS F Y K + L+
Sbjct: 181 AKLLKEAGADILVAGSFVFKSND---YKKAIESLR 212
>gi|332663812|ref|YP_004446600.1| ribulose-phosphate 3-epimerase [Haliscomenobacter hydrossis DSM
1100]
gi|332332626|gb|AEE49727.1| ribulose-phosphate 3-epimerase [Haliscomenobacter hydrossis DSM
1100]
Length = 224
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADF++L E++ + ++ A +HFDVMDG FVPNISFG ++ +++ D
Sbjct: 6 VAPSLLAADFTQLAAEMALVNRSQADWLHFDVMDGRFVPNISFGFPIMEAVQKLCQKPLD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I+ DAG +IT H E+ H+ R+++ I A G K GVA+NP TP+ +L
Sbjct: 66 VHLMILEPEKYISAFRDAGAAVITVHYEACVHLHRTIQEIKASGAKAGVALNPHTPIELL 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+D+++++D+IL+M+VNPGFGGQ+ I TIPKIR+ K + +R++S +E+DGGV +N +
Sbjct: 126 DDILEDVDLILLMSVNPGFGGQKFIYRTIPKIRRLKDRLIERNLSPLIEIDGGVGLQNAE 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L++AGA++LV G+S F K + +L +
Sbjct: 186 ELLKAGANVLVAGNSVFGAKDPEATIAQLKAI 217
>gi|304412142|ref|ZP_07393751.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS183]
gi|307306886|ref|ZP_07586626.1| ribulose-phosphate 3-epimerase [Shewanella baltica BA175]
gi|304349408|gb|EFM13817.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS183]
gi|306910464|gb|EFN40894.1| ribulose-phosphate 3-epimerase [Shewanella baltica BA175]
Length = 224
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AG +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCQALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKECGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD+ V GS+ F + + +
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYTTVVDEMRA 217
>gi|195977407|ref|YP_002122651.1| ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974112|gb|ACG61638.1| ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 220
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 135/216 (62%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S++I PSILAAD++ E++ I K A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSSLKIAPSILAADYACFAAELARIEKTNAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + + ++ A AG DI+T H ES+ H +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVNPERYVEAFAQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV+ +E ++ +D +LIMTVNPGFGGQ I + K+ + +R + +EVDGGV
Sbjct: 121 PVSAVEPLLSLVDQVLIMTVNPGFGGQAFIPDCLEKVAAIAKMRDERGLSFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ I++ QAGA++ V GS F + + L
Sbjct: 181 DKTIRACYQAGANVFVAGSYLFKAVDLAAQVQTLRA 216
>gi|157150446|ref|YP_001449518.1| ribulose-phosphate 3-epimerase [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075240|gb|ABV09923.1| ribulose-phosphate 3-epimerase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 219
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 134/217 (61%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+AD++ E+ + AGA H DVMDG FVPNI+FGA V+ S+R +
Sbjct: 1 MT-QFKIAPSILSADYANFESELKRLEAAGADYAHIDVMDGHFVPNITFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+++ + HI AG DIIT H E++PHI +L+ I A G K GV INP
Sbjct: 60 SKLVFDCHLMVTNPEKHIEEFVRAGADIITIHVEATPHIHGALQQIRAAGVKAGVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV ++ V+ +D +L+MTVNPGFGGQ + T+ K+ + +L + + +EVDGG+
Sbjct: 120 TPVQAIKHVLGLVDQVLVMTVNPGFGGQAFLPETLVKVSELASLREQEHLQFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ IK AGA++ V GS F + L +
Sbjct: 180 DNQTIKKAKAAGANVFVAGSYVFKG-DVDHQVQTLRE 215
>gi|224369794|ref|YP_002603958.1| Rpe [Desulfobacterium autotrophicum HRM2]
gi|223692511|gb|ACN15794.1| Rpe [Desulfobacterium autotrophicum HRM2]
Length = 222
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 96/217 (44%), Positives = 135/217 (62%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+ LG+EIS + KAGA IH DVMDG FVPNIS+G ++ + + +
Sbjct: 3 IIAPSILSADFTILGKEISAVEKAGADWIHIDVMDGSFVPNISYGPIIVDACKKVTTLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D I AG D+I+ H E+ H+ R+++ I K GVA+NP TP+
Sbjct: 63 DVHLMIEHPDHLIPDFVKAGADLISVHAEACTHLHRTVQLIQESKVKAGVAVNPATPLTC 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE +I+E+D +L+M+VNPGFGGQ+ I+ST+ KI Q ALI + ++VDGGV I
Sbjct: 123 LEWIIEELDFVLLMSVNPGFGGQKFIQSTLDKIEQLAALIEETGSRAIIQVDGGVGPTTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGA V GS+ F+ YA+ + L++ A
Sbjct: 183 NGVAKAGATSFVAGSAIFSTPD---YAQTITMLRQQA 216
>gi|257871112|ref|ZP_05650765.1| ribulose-phosphate 3-epimerase [Enterococcus gallinarum EG2]
gi|257805276|gb|EEV34098.1| ribulose-phosphate 3-epimerase [Enterococcus gallinarum EG2]
Length = 217
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +I + K GA IH DVMDG FVPNI+ G +V++++R +
Sbjct: 2 IKLAPSILSADFANLQRDIELVEKNGADYIHIDVMDGQFVPNITLGPNVVKAIRPITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ +++I+ A+AG DII H E++PHI R+++ I K + INP TPVA
Sbjct: 62 LDVHLMITQPENYIHAFAEAGADIIGVHAEATPHIHRAIQMILNENVKAEIVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ V+ D +L+MTVNPGFGGQ IE T+ KI++ L K +EVDGG+ +
Sbjct: 122 AIQHVLSMCDQVLVMTVNPGFGGQSFIEETVAKIKELAQLKEKNGYHYDIEVDGGIVPKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++AGA++ V GS ++ K L +
Sbjct: 182 ARICLEAGANVFVAGSYIYDADSPTDQIKALKE 214
>gi|171779176|ref|ZP_02920147.1| hypothetical protein STRINF_01024 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|118421050|dbj|BAF37257.1| putative ribulose phosphate 3 epimerase [Streptococcus bovis]
gi|171282232|gb|EDT47659.1| hypothetical protein STRINF_01024 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 220
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNI+FGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNITFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + ++ A AG DI+T H ES+ HI +L+ I G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERFVDAFAQAGADIMTIHAESTLHIHGALQKIKKAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I + K+++ + ++ +EVDGGV ++ I
Sbjct: 125 IEPVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVQKVAKIRDEKGYDFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ QAGA++ V GS F + + L
Sbjct: 185 KACYQAGANVFVAGSYLFKASDLTAQVETLR 215
>gi|56550914|ref|YP_161753.1| ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241762322|ref|ZP_04760402.1| Ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753394|ref|YP_003226287.1| ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56542488|gb|AAV88642.1| Ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241373116|gb|EER62755.1| Ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258552757|gb|ACV75703.1| ribulose-phosphate 3-epimerase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 220
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 150/221 (67%), Gaps = 3/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+ LG+E++ I +AGA IH DVMDG FVPNI+ G V+++LR Y
Sbjct: 1 MSKLPLIAPSILSADFAHLGDEVAAIDQAGADWIHIDVMDGHFVPNITIGPMVVKALRPY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMI+ +D +I ++AG DII+FHPE+ H R+++ I ++GKK G+ NP
Sbjct: 61 SQKPFDVHLMIAPVDQYIEAFSEAGADIISFHPEAGAHPHRTIQHIKSLGKKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGV 178
TP++ L+ ++D++D+I++M+VNPGFGGQ+ I++ + KI+ + I R I LEVDGG+
Sbjct: 121 TPLSWLDYLMDDLDLIMVMSVNPGFGGQKFIKTQLEKIKDIRQRITASGRDIRLEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ V+AGAD+LV G++ F G Y + L+KS
Sbjct: 181 DATTAPLAVEAGADVLVAGTASFKG-GATCYTDNIRILRKS 220
>gi|153002577|ref|YP_001368258.1| ribulose-phosphate 3-epimerase [Shewanella baltica OS185]
gi|151367195|gb|ABS10195.1| Ribulose-phosphate 3-epimerase [Shewanella baltica OS185]
Length = 224
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AG +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCQALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHVDRTLQLIKECGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ +A I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRARIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD+ V GS+ F + + +
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKAVVDEMRA 217
>gi|160896171|ref|YP_001561753.1| ribulose-phosphate 3-epimerase [Delftia acidovorans SPH-1]
gi|160361755|gb|ABX33368.1| Ribulose-phosphate 3-epimerase [Delftia acidovorans SPH-1]
Length = 227
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 147/230 (63%), Gaps = 11/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLG+E+ N+ +GA IHFDVMD +VPN++FG + +L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGDEVKNVIASGADWIHFDVMDNHYVPNLTFGPMICEALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM+S +D A AG D I+FHP+++ H+ RS++ I A G K G
Sbjct: 61 AKTPDGQPVPIDVHLMVSPVDELATAFAKAGADYISFHPDATAHVHRSIQNIRAQGAKPG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP P+ +L+ VID+ID+IL+M+VNPGFGGQ I+ST+ KI A+ I R I L
Sbjct: 121 LVFNPAAPLDVLDWVIDDIDLILLMSVNPGFGGQSFIDSTLRKIEAARKRIEASGRDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
EVDGG+ NI+ + AGAD V GS+ F + Y ++ ++ + A
Sbjct: 181 EVDGGIKETNIRRVADAGADTFVAGSAIFGKPD---YKAVIDAMRGALAA 227
>gi|33152908|ref|NP_874261.1| D-ribulose-phosphate-3 epimerase [Haemophilus ducreyi 35000HP]
gi|33149133|gb|AAP96650.1| D-ribulose-phosphate-3 epimerase [Haemophilus ducreyi 35000HP]
Length = 224
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 100/215 (46%), Positives = 139/215 (64%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PSIL+AD +RLG++++ + AGA IHFDVMD FVPN++FG + ++LR+Y
Sbjct: 5 PFLIAPSILSADLARLGDDVNQVLTAGADIIHFDVMDNHFVPNLTFGPMICQALRNYGIT 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ ++ I A AG + ITFHPE++ HI R+L+ IH G K G+ NP TP
Sbjct: 65 AEIDVHLMVKPVERIIPDFAKAGANYITFHPEATDHIDRTLQLIHQYGCKAGLVFNPATP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ L+ VID+IDMIL+M VNPGFGGQ I ST+ K+R+ + I +SI LE+DGGV
Sbjct: 125 LHYLDYVIDKIDMILLMGVNPGFGGQTFIPSTLTKLREVRQRIDASGKSIRLEIDGGVKI 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + AGAD V GS+ F+Q+ S ++
Sbjct: 185 DNIAEIAAAGADTFVAGSAIFDQQNYKSVIDQMRA 219
>gi|315658493|ref|ZP_07911365.1| ribulose-phosphate 3-epimerase [Staphylococcus lugdunensis M23590]
gi|315496822|gb|EFU85145.1| ribulose-phosphate 3-epimerase [Staphylococcus lugdunensis M23590]
Length = 214
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ADFS+L +E+ + +AG +HFDVMDG FVPNIS G V+ ++R +
Sbjct: 3 KLYPSLLSADFSQLNQELHKLEQAGVDGLHFDVMDGQFVPNISVGFPVLEAVRRETTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + +I A AG D I+ H E++PHI R+L I K GV INP TPV +
Sbjct: 63 DVHLMIAQPERYIEQFAQAGADFISVHVEATPHIHRALELIKLQNIKAGVVINPGTPVEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQQ I+S + K++Q L I +EVDGG+ + I
Sbjct: 123 IKPVLSIVDYVLVMTVNPGFGGQQFIQSCVAKVQQLAELKAINSYDFDIEVDGGINDQTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K +AGA + V GS FF + L
Sbjct: 183 KLCAEAGASMFVAGSYFFKHHDYAVVTQDLK 213
>gi|331265647|ref|YP_004325277.1| pentose-5-phosphate-3-epimerase (ribulose-phosphate 3-epimerase)
[Streptococcus oralis Uo5]
gi|326682319|emb|CBY99936.1| pentose-5-phosphate-3-epimerase (ribulose-phosphate 3-epimerase)
[Streptococcus oralis Uo5]
Length = 218
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 137/216 (63%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ ++H+ A AG DII+ H E++PHI +L+ I ++G K + INP TPV
Sbjct: 65 DCHLMVANPENHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSIVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ KIR+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKYVLHLVDQVLVMTVNPGFGGQAFLPETMDKIRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|189230344|ref|NP_001121496.1| ribulose-5-phosphate-3-epimerase [Xenopus (Silurana) tropicalis]
gi|183986205|gb|AAI66306.1| LOC100158597 protein [Xenopus (Silurana) tropicalis]
Length = 228
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 127/216 (58%), Gaps = 4/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL +D SRLG E + ++GA +H DVMDG FVPNI+FG V+ LR
Sbjct: 1 MSSGCKIGPSILNSDLSRLGAECDRMLQSGADYLHLDVMDGHFVPNITFGHPVVECLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
SD FD H+M++ + + ++ AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGSDPFFDMHMMVAQPEQWVKPMSAAGANQYTFHLEATNNPGALIKDIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK++ ++ S+ +EVDGGV
Sbjct: 121 PNTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVQWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
NI +AGA+++V GS+ + S K L
Sbjct: 179 GPDNIHRCAEAGANMIVSGSAIMKSEDPRSVIKLLR 214
>gi|29349354|ref|NP_812857.1| ribulose-phosphate 3-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29341262|gb|AAO79051.1| ribulose-phosphate 3-epimerase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 216
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 132/218 (60%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L +I I ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFGYLARDIEMINRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLMI + + I + G + H E+ H+ R ++ I G + V INP
Sbjct: 59 TDKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACTHLHRVIQQIKEAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIQDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERAGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F ++L+ L
Sbjct: 179 NLETGARLVEAGADVLVAGNAVFGAPDPEEMIRQLHKL 216
>gi|49474331|ref|YP_032373.1| Pentose (ribulose)-5-phosphate-3-epimerase [Bartonella quintana
str. Toulouse]
gi|49239835|emb|CAF26228.1| Pentose (ribulose)-5-phosphate-3-epimerase [Bartonella quintana
str. Toulouse]
Length = 224
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 107/220 (48%), Positives = 150/220 (68%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS+LAADFS+LG+E+ +I AGA +H D+MDG FVPNI+FG +V+++LR
Sbjct: 1 MPRSHLISPSLLAADFSKLGQEVLDIVDAGADWLHLDIMDGHFVPNITFGPNVVKALRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ ++FD HLMIS D ++ A AG DIIT H E+ PH+ RSL+ I MGKK G+AINP
Sbjct: 61 TRAIFDVHLMISPADPYLEAFAQAGSDIITIHAEAGPHLHRSLQKIKGMGKKAGLAINPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP +LE ++D++D+ILIMTVNPGFG Q I KI++ K++I R I L VDGG+T
Sbjct: 121 TPEHVLEYLLDQLDLILIMTVNPGFGEQSFIPEMKDKIKRVKSMIAHRPIDLVVDGGITV 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGA++ V GS+ + + Y R++ L+++A
Sbjct: 181 DTIGITAKAGANVFVAGSAIYKDGNKELYKTRISALRQAA 220
>gi|239995404|ref|ZP_04715928.1| ribulose-phosphate 3-epimerase [Alteromonas macleodii ATCC 27126]
Length = 225
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 141/218 (64%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + +AGA +HFDVMD +VPN++FG + +LR+Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDVEKVLEAGADVVHFDVMDNHYVPNLTFGPMICEALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG I+FHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDDLIEKFANAGACYISFHPEASEHIDRSLQLIIDAGCKPGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++ ILIM+VNPGFGGQ+ I ST+ K+R K + + I +E+DGG
Sbjct: 120 ATPLHYLDHVMDKLHHILIMSVNPGFGGQKFIPSTLDKVRAVKQRVLESGYDIRIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + +AGAD+ V GS+ F+Q +++ +
Sbjct: 180 VKVDNIREIAEAGADMFVAGSAIFSQPDYSDVIEQMRN 217
>gi|228472739|ref|ZP_04057497.1| ribulose-phosphate 3-epimerase [Capnocytophaga gingivalis ATCC
33624]
gi|228275790|gb|EEK14556.1| ribulose-phosphate 3-epimerase [Capnocytophaga gingivalis ATCC
33624]
Length = 215
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 137/217 (63%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PS+LAADF+ L +I + ++ A H D+MDG FVPNIS+G V+++++ ++
Sbjct: 1 MLIAPSLLAADFANLQRDIEMVNESQADWFHLDIMDGLFVPNISYGMPVVKAIKEHAKKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I+ A G ++ H E+ H+ R+++ I G K GVA+NP TP+
Sbjct: 61 LDVHLMIVDPDRYIHTFAQLGSSFLSVHYEACTHLHRTVQAIRQEGMKAGVALNPHTPIT 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ED+I ++D++LIM+VNPGFGGQ IE+T K+ QAK LI K +EVDGGV + N
Sbjct: 121 VMEDIITDVDLLLIMSVNPGFGGQSFIENTYKKVSQAKELITKTGSKALIEVDGGVNATN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
LV AGAD+LV GS FN K + LK+S
Sbjct: 181 TPKLVAAGADVLVAGSFVFNAPDP---KKTIEALKRS 214
>gi|257868088|ref|ZP_05647741.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC30]
gi|257874638|ref|ZP_05654291.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC10]
gi|257802202|gb|EEV31074.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC30]
gi|257808802|gb|EEV37624.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC10]
Length = 217
Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +I + + GA IH DVMDG FVPNI+ G ++++++R +
Sbjct: 2 IKLAPSILSADFANLQRDIELVERHGADYIHVDVMDGHFVPNITLGPNIVKAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ + +I+ A+AG DII H E++PHI R+++ I A K + INP T V+
Sbjct: 62 LDVHLMITEPEKYIHAFAEAGADIIGIHAEATPHIHRAIQMIVAENVKAEIVINPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+ D +L+MTVNPGFGGQ IE ++ KI AL ++ +EVDGG+
Sbjct: 122 AIEHVLSMCDQVLVMTVNPGFGGQSFIEESLEKIAVLAALKEEKGYHYDIEVDGGIVPET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K ++AGA++ V GS ++ + + L +
Sbjct: 182 AKRCLEAGANVFVAGSYIYDADEPAAQIRALKE 214
>gi|325261765|ref|ZP_08128503.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
gi|324033219|gb|EGB94496.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
Length = 221
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 93/206 (45%), Positives = 140/206 (67%), Gaps = 2/206 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L +EI+ + + A IH DVMDG FVPNIS G VI+S+R Y+D
Sbjct: 2 IKLAPSILSADFAELRKEITILHLSPADYIHIDVMDGMFVPNISIGLPVIQSIRRYTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +IN AG DIIT H E+ H+ R+++ I G K GV +NP TP++
Sbjct: 62 FDVHLMIEEPYRYINDFVRAGADIITVHAEACRHLHRTIQAIKNQGIKAGVVLNPATPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V++++DM+L+MTVNPGFGG I + +PKI + + +I + + +EVDGG+ N
Sbjct: 122 SIEYVLEDVDMVLLMTVNPGFGGASFIPNVLPKITRLREMIDEMELTVDIEVDGGIKLEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS 208
+K +++AGA+++V GSS F++ ++
Sbjct: 182 VKDVIKAGANVIVAGSSVFSEDTSVN 207
>gi|58428269|gb|AAW77306.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 336
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G+ V ++LR +
Sbjct: 114 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKH 172
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 173 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 232
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 233 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 292
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 293 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVEAV 335
>gi|323448034|gb|EGB03938.1| hypothetical protein AURANDRAFT_69979 [Aureococcus anophagefferens]
Length = 276
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 141/225 (62%), Gaps = 4/225 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS- 61
I PSIL+ADF+RLGEE+ N AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 43 KDFLIAPSILSADFARLGEEVVNSLSAGADVVHFDVMDNHYVPNLTIGPMVCSALRKHGV 102
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+S +D + ADAG ITFHPE+SPH+ R+L+ I G K G+ NP T
Sbjct: 103 TAPIDVHLMVSPVDRIVGDFADAGASYITFHPEASPHVDRTLQLIRGAGCKAGLVFNPAT 162
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVT 179
P+ IL+ V+D++D+IL+M+VNPGFGGQ I +T+ K R+A+ LI + E+DGGV+
Sbjct: 163 PLDILKYVMDKVDIILLMSVNPGFGGQSFIPATLDKAREARKLIDASGYDIRLEIDGGVS 222
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKSALAI 223
NIK + +AG D+ V GS+ F E Y ++ ++ A
Sbjct: 223 GANIKEVAEAGVDMFVAGSAIFRDPRTEEDYKVTIDAMRDELAAA 267
>gi|332285784|ref|YP_004417695.1| ribulose-phosphate 3-epimerase [Pusillimonas sp. T7-7]
gi|330429737|gb|AEC21071.1| ribulose-phosphate 3-epimerase [Pusillimonas sp. T7-7]
Length = 233
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 139/220 (63%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ +I PS+LAADF++LG+E+ ++ AGA IHFDVMD +VPN++ G V ++R ++
Sbjct: 4 SQPTRIAPSLLAADFAKLGDEVKSVVAAGADWIHFDVMDNHYVPNLTIGPMVCEAIRPHT 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D+ D HLM+ +D+ I A AG +IITFHPE+S H RSL I +G K G+ NP T
Sbjct: 64 DAPIDVHLMVEPVDAIIPQFAKAGANIITFHPEASKHPDRSLSLIRDLGCKAGLVFNPAT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
+ ++ V+D++D++L+M+VNPGFGGQ I T+ K+ A+ I + + I+LE+D
Sbjct: 124 SLNWMDHVMDKLDVVLLMSVNPGFGGQSFIPGTLAKLALARQKIDRWQNQGGQPIALEID 183
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV NI ++ AGAD V GS+ F+Q + L
Sbjct: 184 GGVKVDNIAAIRAAGADTFVAGSAIFSQPNYKTVIDALRA 223
>gi|302341806|ref|YP_003806335.1| ribulose-phosphate 3-epimerase [Desulfarculus baarsii DSM 2075]
gi|301638419|gb|ADK83741.1| ribulose-phosphate 3-epimerase [Desulfarculus baarsii DSM 2075]
Length = 219
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 89/205 (43%), Positives = 130/205 (63%), Gaps = 2/205 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ LGE + GA IH DVMDG FVPN++ G V+ ++R
Sbjct: 2 VMIAPSILSADFAALGEGVRQAADGGADWIHVDVMDGHFVPNLTIGPPVVAAIRKVCALP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I A AG D I+ H E+ H++R+L I +GKK GVA+NP TP+
Sbjct: 62 FDVHLMIETPDKYIEAFAAAGADWISVHAEACTHLQRTLAHIRDLGKKAGVALNPHTPLC 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+LE+++D++D +L+M+VNPGFGGQ I + PK + + +I + R I ++VDGGV+
Sbjct: 122 VLENILDDLDYVLLMSVNPGFGGQSYIPANTPKTARLRRMIEQSGREILIQVDGGVSPAT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEI 207
I + AGA + V GS+ + K +
Sbjct: 182 IGPVAAAGASVFVAGSAIYGDKDGV 206
>gi|237714419|ref|ZP_04544900.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D1]
gi|262408249|ref|ZP_06084796.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_22]
gi|294643618|ref|ZP_06721421.1| ribulose-phosphate 3-epimerase [Bacteroides ovatus SD CC 2a]
gi|294806133|ref|ZP_06764985.1| ribulose-phosphate 3-epimerase [Bacteroides xylanisolvens SD CC 1b]
gi|298480267|ref|ZP_06998465.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D22]
gi|229445583|gb|EEO51374.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D1]
gi|262353801|gb|EEZ02894.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_22]
gi|292641052|gb|EFF59267.1| ribulose-phosphate 3-epimerase [Bacteroides ovatus SD CC 2a]
gi|294446647|gb|EFG15262.1| ribulose-phosphate 3-epimerase [Bacteroides xylanisolvens SD CC 1b]
gi|295086557|emb|CBK68080.1| ribulose-5-phosphate 3-epimerase [Bacteroides xylanisolvens XB1A]
gi|298273548|gb|EFI15111.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D22]
Length = 216
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + I + G + H E+ PH+ R ++ I G + V INP
Sbjct: 59 SKKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + + ++L++L
Sbjct: 179 NLETGARLVEAGADALVAGNAVFGAQDPVEMIRQLHEL 216
>gi|304311725|ref|YP_003811323.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium HdN1]
gi|301797458|emb|CBL45678.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium HdN1]
Length = 223
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 139/224 (62%), Gaps = 7/224 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLG E+ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MSEFLIAPSILSADFARLGAEVDAVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRKYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 61 VSAPIDVHLMVSPVDRMIADFIEAGATYITFHPEASTHIDRSLQMIRDGGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ L+ V+D++DM+L+M+VNPGFGGQ+ I ST+ K+R +A I + + EVDGGV
Sbjct: 121 TPLHYLDYVMDKLDMVLLMSVNPGFGGQKFIPSTLDKLRAVRARIDVSGLPIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
NI + AGAD V GS+ FN Y + + ++ +ALA
Sbjct: 181 GVGNIAEIAAAGADTFVAGSAIFNAPD---YQQVIAQMR-AALA 220
>gi|260588068|ref|ZP_05853981.1| ribulose-phosphate 3-epimerase [Blautia hansenii DSM 20583]
gi|331082363|ref|ZP_08331489.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541595|gb|EEX22164.1| ribulose-phosphate 3-epimerase [Blautia hansenii DSM 20583]
gi|330400849|gb|EGG80450.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
6_1_63FAA]
Length = 218
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 141/217 (64%), Gaps = 3/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
Q+ PSILAADFS LGEEI+ + +AGA+ +H D+MDG FVP+IS G VI S+R +D
Sbjct: 2 EYQLSPSILAADFSNLGEEITKVERAGARWLHIDIMDGQFVPSISMGIPVISSIRKRTDL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H+M + I A AG D+IT H E+ P++ R+LR I G K GVAINP T V
Sbjct: 62 FFDVHIMALDPTALIEDFAKAGADLITVHVEACPNLDRTLRLIREKGCKVGVAINPATSV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
+LE+V++ +DM+LIMTVNPGFGGQ I K+RQ + + +R+ + +EVDGG+
Sbjct: 122 HVLENVLEIVDMVLIMTVNPGFGGQAYIPYCANKVRQIREMAKERNLTLDIEVDGGINKN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I+ +V AGA+++V GS+ F Q + K L + +
Sbjct: 182 TIQEVVDAGANIIVAGSAVF-QGDVDANVKELKGIME 217
>gi|170690077|ref|ZP_02881244.1| Ribulose-phosphate 3-epimerase [Burkholderia graminis C4D1M]
gi|170144512|gb|EDT12673.1| Ribulose-phosphate 3-epimerase [Burkholderia graminis C4D1M]
Length = 237
Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 89/222 (40%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+ADF+RL +EI ++T AGA +H DVMD +VPN++ G V ++R ++
Sbjct: 1 MRDFLIAPSLLSADFARLADEIRDVTVAGADWVHLDVMDNHYVPNLTVGPLVCSAIRPHT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM +D + A+AG + I+FHPE+S H+ R++ I G + G+A+NP T
Sbjct: 61 RVPIDVHLMTMPVDPLVIAFAEAGANTISFHPEASLHVHRTIELIKTQGARVGLALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+A+L+ VI+ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVD
Sbjct: 121 PLAVLDHVIERLDVVLVMSVNPGFGGQAFIPETLAKLRMLRERVDATMQRTGRPLLIEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
GGV + NI + AGAD+ V GS+ F YA+ ++D++
Sbjct: 181 GGVKASNIAQIAAAGADVFVAGSAVFGADD---YARAISDMR 219
>gi|322391323|ref|ZP_08064793.1| ribulose-phosphate 3-epimerase [Streptococcus peroris ATCC 700780]
gi|321145749|gb|EFX41140.1| ribulose-phosphate 3-epimerase [Streptococcus peroris ATCC 700780]
Length = 239
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + ++ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVANPEHYLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL K+ ++ +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREKKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVFKG----DVNERVQALRKQ 237
>gi|293364730|ref|ZP_06611447.1| ribulose-phosphate 3-epimerase [Streptococcus oralis ATCC 35037]
gi|291316180|gb|EFE56616.1| ribulose-phosphate 3-epimerase [Streptococcus oralis ATCC 35037]
Length = 239
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLSFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 237
>gi|313891923|ref|ZP_07825524.1| ribulose-phosphate 3-epimerase [Dialister microaerophilus UPII
345-E]
gi|313119566|gb|EFR42757.1| ribulose-phosphate 3-epimerase [Dialister microaerophilus UPII
345-E]
Length = 213
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF+ L +E+ I K+GA +H D+MDG FVPN++FG +I ++R ++
Sbjct: 1 MKIAPSLLSADFANLEKEVREIEKSGADLLHLDMMDGHFVPNLTFGVPIINAIRKHTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ + + +++ + G +I+FH E+S H R ++ I K G+AINP T +
Sbjct: 61 FDIHMMVFNPEKYLDELEKVGVQMISFHQEASIHQDRIIQEIKERKIKAGIAINPATSIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ +D +LIM+VNPGFGGQ+ I T+ K+++ K +I + +EVDGG+ + N
Sbjct: 121 NIEPILPILDYVLIMSVNPGFGGQKFIYYTLEKVKKLKKIIQNNGYNTLIEVDGGIKAEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ L AGAD+ V GS+ F + L
Sbjct: 181 IQLLKDAGADICVAGSAVFGKPDRKKAIAILK 212
>gi|300113344|ref|YP_003759919.1| ribulose-phosphate 3-epimerase [Nitrosococcus watsonii C-113]
gi|299539281|gb|ADJ27598.1| ribulose-phosphate 3-epimerase [Nitrosococcus watsonii C-113]
Length = 223
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 136/213 (63%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
+I PSIL+ADF+RLGEE++ + +AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 5 KIAPSILSADFARLGEEVTAVLEAGADIVHFDVMDNHYVPNLTIGPLVCEALRKHGITAD 64
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D A AG + ITFHPE+S HI R+L+ I G K+G+ NP T +
Sbjct: 65 IDVHLMVKPVDRIAPDFAKAGANYITFHPEASEHIDRTLQLIRDEGCKSGLVFNPATSLD 124
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
L+ VID++DM+LIM+VNPGFGGQ+ I + + K+R+A+ +I I LE+DGG+ N
Sbjct: 125 YLKYVIDKVDMVLIMSVNPGFGGQKFIPTALDKLREARRIIDASGYPIRLEIDGGIKIDN 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ + AGAD V GS+ F + + +
Sbjct: 185 IQQVAMAGADTFVAGSAIFQSENYKTTIGEMRA 217
>gi|1169389|sp|P45455|RPE_SERMA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|498769|emb|CAA55178.1| dod [Serratia marcescens]
Length = 210
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 96/207 (46%), Positives = 132/207 (63%), Gaps = 3/207 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ +N+ AG +HFDVMD +VPN++ G V +LR+Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG I+FHPE+S H+ R+++ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIVPDFAKAGASYISFHPEASEHVDRTIQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ V+D+ID+IL+M+VNPGFGGQ I T+ K+RQ + LI R I LEVDGGV
Sbjct: 121 TPLSYLDYVMDKIDVILLMSVNPGFGGQSFIHGTLDKLRQVRKLIDDSGRDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKG 205
NI + AGAD+ V GS+ F Q
Sbjct: 181 KVDNIAEIAAAGADMFVAGSAIFGQPD 207
>gi|311103563|ref|YP_003976416.1| ribulose-phosphate 3-epimerase [Achromobacter xylosoxidans A8]
gi|310758252|gb|ADP13701.1| ribulose-phosphate 3-epimerase [Achromobacter xylosoxidans A8]
Length = 242
Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 136/218 (62%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+ADF+RLGEE+ N+ AGA IH DVMD +VPN++ G V ++R +
Sbjct: 15 STRITPSILSADFARLGEEVRNVVAAGADWIHVDVMDNHYVPNLTIGPMVCAAIRPHVQV 74
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D + + A AG D I+FHP++S H+ R+L I G K G+ NP TP+
Sbjct: 75 PIDVHLMVEPVDDLVPMFAKAGADYISFHPDASRHVDRTLSLIRENGCKAGLVFNPATPL 134
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+ L+ V+D+ID+ILIM+VNPGFGGQ I + K+R+A+A I + I L+VDGG
Sbjct: 135 SYLDYVMDKIDLILIMSVNPGFGGQSFIPGALTKLREARARIDAWMQAGGQEIVLQVDGG 194
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + +AGAD V GS+ F + K + D
Sbjct: 195 VKIDNIAEIRRAGADTFVAGSAIFGKPDYAGIIKSMRD 232
>gi|325278989|ref|YP_004251531.1| ribulose-phosphate 3-epimerase [Odoribacter splanchnicus DSM 20712]
gi|324310798|gb|ADY31351.1| ribulose-phosphate 3-epimerase [Odoribacter splanchnicus DSM 20712]
Length = 219
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 138/216 (63%), Gaps = 2/216 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PS+LAADF LG+++ + ++ A IH D+MDG FVPNIS+G V+ ++ +
Sbjct: 2 SVIVSPSLLAADFMNLGKDVEMVDRSKADWIHLDIMDGVFVPNISYGLPVVSQIKKIARK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I AG DI+T H E+S H+ R+L+ I A G K GVA+NP TPV
Sbjct: 62 PLDVHLMIVQPERYIEAFHKAGADILTVHLEASTHLHRTLQQIKASGMKAGVALNPHTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LED+I +ID++LIM+VNPGFGGQ IE ++ K+++ KALI +E+DGGV
Sbjct: 122 SLLEDIIQDIDVVLIMSVNPGFGGQSFIEHSLEKVKKLKALIQATHSHTLIEIDGGVNFE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ LV AGAD LV GS F + + L +LK
Sbjct: 182 TGRELVTAGADALVAGSFVFKSEDPEATIAGLKNLK 217
>gi|297180121|gb|ADI16344.1| pentose-5-phosphate-3-epimerase [uncultured bacterium HF130_01F24]
Length = 227
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 140/212 (66%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVF 65
I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++FG V ++LR+Y +
Sbjct: 6 IAPSILSADFARLGEEVDAVLEAGADVIHFDVMDNHYVPNLTFGPMVCQALRNYKISAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ +D I A AG I+FHPE+S HI RSL+ I G K+G+ NP TP+
Sbjct: 66 DVHLMVTPVDEMILEFARAGASYISFHPEASVHIDRSLQLIRDQGCKSGLVFNPGTPIDC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
LE +ID+ID+IL+M+VNPGFGGQ+ + ST+ K+ + +I + + EVDGG++ NI
Sbjct: 126 LEYLIDKIDVILLMSVNPGFGGQKFLPSTLKKLANVRKIIDDAGLPIRLEVDGGISVENI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + AGAD+ V GS+ F + K + +
Sbjct: 186 RRVADAGADMFVAGSAIFKNNDYSAIIKAMRE 217
>gi|241889704|ref|ZP_04777002.1| ribulose-phosphate 3-epimerase [Gemella haemolysans ATCC 10379]
gi|241863326|gb|EER67710.1| ribulose-phosphate 3-epimerase [Gemella haemolysans ATCC 10379]
Length = 214
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSIL+ADF+ L +I + G H DVMDG FVPNISFG +I S+R +D VF
Sbjct: 3 KILPSILSADFANLERDIKELESIGIDMFHIDVMDGNFVPNISFGFPIIESIRPKTDKVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI++ ++++ GCD+++FH E++ H R ++ I GKK G+ +NP+TP+
Sbjct: 63 DCHLMIANPENYVEQFCKVGCDMVSFHIEATNHADRVIQVIKNNGKKAGIVLNPQTPIES 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ +++ +LIMTVNPGFGGQ+ I + KI + L +++ + +EVDGG+
Sbjct: 123 IKYLLPKLNYVLIMTVNPGFGGQKFIPEMLEKIEELAKLREEKNYNFLIEVDGGINIETS 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K+ GADLLV GS F + L
Sbjct: 183 KACRDKGADLLVCGSFLFGASDKEKTLGEL 212
>gi|319789366|ref|YP_004150999.1| ribulose-phosphate 3-epimerase [Thermovibrio ammonificans HB-1]
gi|317113868|gb|ADU96358.1| ribulose-phosphate 3-epimerase [Thermovibrio ammonificans HB-1]
Length = 222
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 141/221 (63%), Gaps = 7/221 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + PSIL+ADF+RL +E+S + +AGA +H DVMDG FVPNI+ G V+ SLR
Sbjct: 1 MVP--MLAPSILSADFARLAQEVSAVERAGADLLHVDVMDGRFVPNITVGIPVVESLRQV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLMI + +I AG D ++FH E++ H R + I +G K G+ INP
Sbjct: 59 TELPLDVHLMIVEPERYIPAFVKAGADWVSFHFEAAVHHHRIVEQIKELGAKAGIVINPS 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV L +++ +D +L+M+VNPGFGGQ+ I +++ KIR+ + L + S+ +EVDGGV
Sbjct: 119 TPVDFLVEILPFLDFVLVMSVNPGFGGQKFIPTSLGKIRRLRELAVELNPSLVIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN---QKGEISYAKRLNDL 216
N++ +++AGAD++V GS+ F + ++ ++LN
Sbjct: 179 KLSNVEDVLKAGADVVVAGSAVFKGNPAENVAAFKEKLNRF 219
>gi|289550998|ref|YP_003471902.1| Ribulose-phosphate 3-epimerase [Staphylococcus lugdunensis
HKU09-01]
gi|289180530|gb|ADC87775.1| Ribulose-phosphate 3-epimerase [Staphylococcus lugdunensis
HKU09-01]
Length = 214
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ADFS+L +E+ + +AG +HFDVMDG FVPNIS G V+ ++R +
Sbjct: 3 KLYPSLLSADFSQLNQELHKLEQAGVDGLHFDVMDGQFVPNISVGFPVLEAVRRETTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + +I A AG D I+ H E++PHI R+L I K GV INP TPV +
Sbjct: 63 DVHLMIAQPERYIEQFAQAGADFISVHVEATPHIHRALELIKLQNIKAGVVINPGTPVEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ I+S + K++Q L I +EVDGG+ + I
Sbjct: 123 IKPVLSIVDYVLVMTVNPGFGGQHFIQSCVAKVQQLAELKAINSYDFDIEVDGGINDQTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K +AGA + V GS FF + L
Sbjct: 183 KLCAEAGASMFVAGSYFFKHHDYAVVTQDLK 213
>gi|110638008|ref|YP_678215.1| ribulose-phosphate 3-epimerase [Cytophaga hutchinsonii ATCC 33406]
gi|110280689|gb|ABG58875.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Cytophaga hutchinsonii ATCC 33406]
Length = 217
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ I PS+L+ADF+ L ++ I + A H D+MDG FVPNISFG V++++ ++
Sbjct: 3 NVLIAPSVLSADFANLERDVKMINSSKADWFHIDIMDGVFVPNISFGFPVMQAINKHAAK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + + +I D+G I+ H E+ H+ R++ I +G K G+AINP TP+
Sbjct: 63 PLDVHLMIVNPEKYIQTFKDSGAANISVHYEACTHLHRTIYQIKDVGCKAGIAINPHTPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+L+DVI +ID++ +M+VNPGFGGQ+ IE T K+R K LI + + + +E+DGGV
Sbjct: 123 HLLKDVIKDIDLVCMMSVNPGFGGQKFIEHTYQKVRDLKQLIQENNANVLIEIDGGVNEV 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LVQAGAD+LV G+ F+ K ++ ++L ++
Sbjct: 183 TGPKLVQAGADVLVAGNYVFSAKDPVATIEQLKNI 217
>gi|219871883|ref|YP_002476258.1| ribulose-phosphate 3-epimerase [Haemophilus parasuis SH0165]
gi|219692087|gb|ACL33310.1| ribulose-phosphate 3-epimerase [Haemophilus parasuis SH0165]
Length = 224
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 141/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+AD +RLG++++ + KAGA IHFDVMD +VPN++FG + ++LR Y
Sbjct: 3 KQPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHYVPNLTFGPAICKALRDYG 62
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM +D I A AG DIITFHPE++ HI RSL+ I G K+G+ NP
Sbjct: 63 ITCLIDVHLMAKPVDRLIPDFAKAGADIITFHPEATEHIDRSLQLIREHGCKSGLVFNPA 122
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ + ST+ K+R+A+ I ++ EVDGGV
Sbjct: 123 TPLSYLDYVMDKVDVILLMSVNPGFGGQAFLPSTLNKLREARRRIDASGFNIRLEVDGGV 182
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD+ V GS+ F+Q + ++
Sbjct: 183 KVNNIAEIAEAGADMFVAGSAIFDQPDYKAVIDQMRA 219
>gi|299532833|ref|ZP_07046220.1| ribulose-phosphate 3-epimerase [Comamonas testosteroni S44]
gi|298719057|gb|EFI60027.1| ribulose-phosphate 3-epimerase [Comamonas testosteroni S44]
Length = 226
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 148/227 (65%), Gaps = 11/227 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + ++L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPH 60
Query: 61 S------DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S D HLM+ +D A AG D I+FHP++S H+ RS++ I A G K G
Sbjct: 61 SVTPDGKPVPIDVHLMVQPVDDLATAFAKAGADYISFHPDASQHVHRSVQNIKAHGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP + +L+ +I++ID+IL+M+VNPGFGGQ I+ST+ KI +A+ LI + I L
Sbjct: 121 LVFNPAASLEVLDWMIEDIDLILLMSVNPGFGGQSFIDSTLRKIERARKLIDASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
EVDGG+ NI+++ AGAD V GS+ F + Y ++ ++K+
Sbjct: 181 EVDGGIKEANIRAVADAGADTFVAGSAIFGKPD---YKAVIDTMRKN 224
>gi|312132115|ref|YP_003999455.1| ribulose-phosphate 3-epimerase [Leadbetterella byssophila DSM
17132]
gi|311908661|gb|ADQ19102.1| ribulose-phosphate 3-epimerase [Leadbetterella byssophila DSM
17132]
Length = 216
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+LAADF+ L ++ + + A H D+MDG FVPN+SFG V ++ ++
Sbjct: 3 IIAPSVLAADFANLQRDVELVNASAADWFHIDIMDGVFVPNLSFGVPVTEAIAKHAKKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +I A AG IT H E+ HI R+L I G K GV +NP TP+++
Sbjct: 63 DVHLMIVQPERYIETFAKAGASYITVHWEACTHIHRTLAQIKEAGCKAGVVLNPGTPISV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+DV+++ DMIL+M+VNPGFGGQ+ IE+T+ K + K +I +++ +E+DGGV
Sbjct: 123 LDDVLEDADMILLMSVNPGFGGQKFIENTLAKTSRLKDMILRKNSKALIEIDGGVNLETG 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LVQAGAD LV GS FN L L
Sbjct: 183 ARLVQAGADALVAGSFVFNAADPKQVISELKVL 215
>gi|325297464|ref|YP_004257381.1| ribulose-phosphate 3-epimerase [Bacteroides salanitronis DSM 18170]
gi|324317017|gb|ADY34908.1| ribulose-phosphate 3-epimerase [Bacteroides salanitronis DSM 18170]
Length = 220
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 92/218 (42%), Positives = 128/218 (58%), Gaps = 2/218 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+LAA+F L E+ I + A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKKELIISPSLLAANFGNLERELEKINNSEADWLHIDIMDGVFVPNISFGFPVLKYVSKL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+ D HLMI + I+ + D G ++ H E+ H+ R ++ I G K GV +NP
Sbjct: 61 SEKPLDVHLMIVQPEKFIHEVKDLGTMMMNVHYEACVHLHRVVQQIKDAGMKAGVTLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV++LED+I ++DM+L+M VNPGFGGQ+ IE TI K+R + LI + +EVDGGV
Sbjct: 121 TPVSMLEDIIRDVDMVLLMGVNPGFGGQKFIEHTIGKVRVLRELIERTGSSALIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AG D+LV GS+ F RL L
Sbjct: 181 NLDTGARLVEAGTDVLVTGSAVFKAPDMGEMIHRLKML 218
>gi|258590989|emb|CBE67284.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [NC10 bacterium 'Dutch sediment']
Length = 221
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ + AGA IH DVMD FVPN++ G V+ ++R ++
Sbjct: 3 TYKIAPSILSADFARLGEEVRAVDAAGADYIHVDVMDNHFVPNLTIGPAVVAAIRPHTAK 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +D I A +G DIIT HPE++ H+ R+++ I +G + GV++NP +P+
Sbjct: 63 PLDVHLMIEPVDPIIPDFAKSGADIITVHPEATRHLDRTIQLIKGLGCRAGVSLNPASPI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
A ++ V++++D++L+M+VNPGFGGQ I+ +PKI + I ++I LEVDGGV
Sbjct: 123 AWMDHVLEQLDLVLVMSVNPGFGGQSFIDYVLPKITVIRRRIDAIGKAIDLEVDGGVKVE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N++ + AGAD V GS+ F + R
Sbjct: 183 NVRRVADAGADTFVAGSAVFGTPDYAATIARFR 215
>gi|117922320|ref|YP_871512.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. ANA-3]
gi|117614652|gb|ABK50106.1| ribulose-5-phosphate 3-epimerase [Shewanella sp. ANA-3]
Length = 225
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIVPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I ST+ K+RQ + I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPSTLDKLRQVRERIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD+ V GS+ F + + ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFGKPDYKAVVDEMHA 217
>gi|153807347|ref|ZP_01960015.1| hypothetical protein BACCAC_01625 [Bacteroides caccae ATCC 43185]
gi|149129709|gb|EDM20921.1| hypothetical protein BACCAC_01625 [Bacteroides caccae ATCC 43185]
Length = 216
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 133/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + I + G + H E+ PH+ R ++ I G + V INP
Sbjct: 59 SKKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVVQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVRELRALIEQTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + RL++L
Sbjct: 179 NLETGARLVEAGADALVAGNAVFGAPDPEAMIHRLHEL 216
>gi|94499980|ref|ZP_01306515.1| ribulose-phosphate 3-epimerase [Oceanobacter sp. RED65]
gi|94427838|gb|EAT12813.1| ribulose-phosphate 3-epimerase [Oceanobacter sp. RED65]
Length = 225
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 142/222 (63%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR++
Sbjct: 3 KQSPLIAPSILSADFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRNHG 62
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+S +D I +AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 63 VTAPIDVHLMVSPVDRIIGDFIEAGASYITFHPEASDHIDRSLQIIKDAGCKAGLVFNPA 122
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ ++ V+D++DM+L+M+VNPGFGGQ I +T+ K++QA+ I + + E+DGGV
Sbjct: 123 TPLHYMDYVMDKLDMVLLMSVNPGFGGQSFIPATLDKLKQARKKIDDSGLDIRLEIDGGV 182
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
NI + AGAD V GS+ FN + +++ ++ KS
Sbjct: 183 KVDNIAEIAAAGADTFVAGSAIFNADDYQTTIEKMRAEIAKS 224
>gi|160890848|ref|ZP_02071851.1| hypothetical protein BACUNI_03293 [Bacteroides uniformis ATCC 8492]
gi|270295854|ref|ZP_06202054.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D20]
gi|317479722|ref|ZP_07938844.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 4_1_36]
gi|156859847|gb|EDO53278.1| hypothetical protein BACUNI_03293 [Bacteroides uniformis ATCC 8492]
gi|270273258|gb|EFA19120.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D20]
gi|316904092|gb|EFV25924.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 4_1_36]
Length = 216
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 131/218 (60%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L +I I ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFGYLARDIEMINESEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + I + G ++ H E+ PH+ R ++ I G + V INP
Sbjct: 59 SQKPLDVHLMIVQPEKFIPEVKALGAHVMNVHYEACPHLHRVVQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV++L+D+I+++ M+LIM+VNPGFGGQ+ IE ++ K+R+ + LI +EVDGGV
Sbjct: 119 TPVSLLKDIINDVYMVLIMSVNPGFGGQKFIEHSLDKVRELRELITVTGSQALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F+ + L +L
Sbjct: 179 NLETGSRLVEAGADVLVAGNAVFSAPDPKEAIRALRNL 216
>gi|322515567|ref|ZP_08068548.1| ribulose-phosphate 3-epimerase [Actinobacillus ureae ATCC 25976]
gi|322118370|gb|EFX90636.1| ribulose-phosphate 3-epimerase [Actinobacillus ureae ATCC 25976]
Length = 224
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 140/215 (65%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PSIL+AD SRLG++++ + KAG IHFDVMD FVPN++FG + ++LR Y
Sbjct: 5 PFLIAPSILSADLSRLGDDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRDYGIT 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+ ++ I A AG + ITFHPE++ HI R+L+ I +G K+G+ NP TP
Sbjct: 65 AEIDVHLMVKPVERLIPDFAKAGANYITFHPEATDHIDRTLQMIRDLGCKSGLVFNPATP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
++ L V+D++DMIL+M VNPGFGGQ+ I +T+ K+++A+ I K I LE+DGGV
Sbjct: 125 LSYLNYVMDKVDMILLMGVNPGFGGQRFIPATLEKLQEARRRIDKSGYPIRLEIDGGVKI 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD V GS+ F+Q + ++
Sbjct: 185 ENIAEIAKAGADTFVAGSAIFDQPDYKAVIDQMRA 219
>gi|307565936|ref|ZP_07628395.1| ribulose-phosphate 3-epimerase [Prevotella amnii CRIS 21A-A]
gi|307345364|gb|EFN90742.1| ribulose-phosphate 3-epimerase [Prevotella amnii CRIS 21A-A]
Length = 216
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PS+L+ADF L ++I I + A +H DVMDG FVPNISFG V++++
Sbjct: 2 SVIVSPSLLSADFLHLYKDIEMINNSDADWLHMDVMDGSFVPNISFGFPVMKAVSKVLKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +++I D G I+ H E+ H+ R+L+ I A G K GV +NP TPV
Sbjct: 62 PMDVHLMIKHPENYIQQTLDCGAAIMNIHYEACIHLHRTLQAIKATGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LED+I++ID++ IM+VNPGFGGQ I+S++ K+R+ KALI + +EVDGGV
Sbjct: 122 NVLEDIIEDIDIVQIMSVNPGFGGQSFIKSSLKKVRKLKALIENEHCNTLIEVDGGVNGE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AG D+LV GS F K S K L L
Sbjct: 182 TAPLLIDAGTDILVSGSYIFGSKNPYSTIKSLKAL 216
>gi|302533352|ref|ZP_07285694.1| ribulose-phosphate 3-epimerase [Streptomyces sp. C]
gi|302442247|gb|EFL14063.1| ribulose-phosphate 3-epimerase [Streptomyces sp. C]
Length = 228
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 4/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G V+ SL +D
Sbjct: 2 AVQINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLSRATDI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDLHLMIEDPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARAAMALKPGTPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PK+R+ + LI K + L+VDGGV++
Sbjct: 120 EQYEDILPELDMVLIMTVEPGFGGQSFLDIMLPKVRRTRELIAKHGLDLWLQVDGGVSAT 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ + +AGAD+ V GS+ + + + L D
Sbjct: 180 TIERVAEAGADVFVAGSAVYGAVDPAAAVRTLRD 213
>gi|254383560|ref|ZP_04998910.1| ribulose-phosphate 3-epimerase [Streptomyces sp. Mg1]
gi|194342455|gb|EDX23421.1| ribulose-phosphate 3-epimerase [Streptomyces sp. Mg1]
Length = 228
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 127/214 (59%), Gaps = 4/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + G+ +H DVMD FVPN++ G ++ SL +D
Sbjct: 2 AVQINPSILSADFARLAEEAKAVE--GSDWLHVDVMDNHFVPNLTLGMPIVESLSRATDI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDLHLMIEDPDRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARAAMALKPGTPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + +I K + L+VDGGV++
Sbjct: 120 EQYEDLLPELDMVLIMTVEPGFGGQSFLDIMLPKIRRTREMIAKHGLDLWLQVDGGVSAT 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ +AGAD+ V GS+ + + + L +
Sbjct: 180 TIERAAEAGADVFVAGSAVYGAVDPAAAVRTLRE 213
>gi|302386498|ref|YP_003822320.1| ribulose-phosphate 3-epimerase [Clostridium saccharolyticum WM1]
gi|302197126|gb|ADL04697.1| ribulose-phosphate 3-epimerase [Clostridium saccharolyticum WM1]
Length = 220
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 145/216 (67%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSILAADF LG+++ ++ +AGA+ IH DVMDG FVP+ISFG VI SLRS +D +
Sbjct: 2 LKLAPSILAADFKILGQQVVDVAEAGAQYIHLDVMDGAFVPSISFGMPVIGSLRSCTDRI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ +IN + +AG D+I H E+ H+ R++ I G K GVA+NP T ++
Sbjct: 62 FDVHMMVEEPGRYINDMKEAGADLICVHAEACTHLDRTMNQIKEAGLKAGVALNPATSLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+ ++ E+DM+LIM+VNPGFGGQ+ I T+ K+R + + +R + ++VDGGVT N
Sbjct: 122 VLDQILPELDMVLIMSVNPGFGGQKFIPYTLEKVRALRRICIERHLETDIQVDGGVTCDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ L++AGA++ V GS+ F + L ++
Sbjct: 182 VRELIEAGANVFVAGSAVFKGNAAANTKAFLKIFEE 217
>gi|291231419|ref|XP_002735659.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 226
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 2/215 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D S L E + AGA +H DVMDG FVPNI+FG V+ LR
Sbjct: 1 MATGCKIGPSILNSDLSLLASESQRMMDAGADYLHLDVMDGHFVPNITFGHPVVACLRKK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD H+M+S+ +S + +AD+G + TFH E++ + +R I G K G+ + P+
Sbjct: 61 TSAFFDMHMMVSNPESWVEPMADSGANQYTFHVEATDDPKSCIRKIREAGMKVGIGVKPK 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T V ++ I+++DM+LIMTV PGFGGQ + +PK++ + R++ +EVDGGV
Sbjct: 121 TDVEVVLPYIEDVDMVLIMTVEPGFGGQSFMSDMMPKVQFLRQKF--RALDIEVDGGVGL 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ +AGA+++V G++ + L
Sbjct: 179 NTIEQCAEAGANMIVSGTAVVKSDNPRQVIQTLRS 213
>gi|222153741|ref|YP_002562918.1| ribulose-phosphate 3-epimerase [Streptococcus uberis 0140J]
gi|222114554|emb|CAR43499.1| putative ribulose-phosphate 3-epimerase [Streptococcus uberis
0140J]
Length = 220
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFASELKRIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + ++ A AG DI+T H ES+ HI +L+ I + G K GV INP TPV+
Sbjct: 65 DCHLMVVDPERYVEAYAQAGADIMTIHTESTKHIHGALQKIKSAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++ +D +LIMTVNPGFGGQ I + K+ + +L + +EVDGGV ++ I
Sbjct: 125 LKPVLNLVDQVLIMTVNPGFGGQAFIPECLEKVEEVASLRETLGLTFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGA++ V GS F +S + L
Sbjct: 185 AACQKAGANIFVAGSYLFKASDLVSQVQTLR 215
>gi|91791635|ref|YP_561286.1| ribulose-phosphate 3-epimerase [Shewanella denitrificans OS217]
gi|91713637|gb|ABE53563.1| ribulose-5-phosphate 3-epimerase [Shewanella denitrificans OS217]
Length = 222
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 139/223 (62%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AG +HFDVMD +VPN++ G V +LR+Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGTDVVHFDVMDNHYVPNLTIGPMVCTALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIIPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ +A I + EVDGG
Sbjct: 120 ATPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPATLDKLRQVRARIDASGFDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
V NI + AGAD+ V GS+ FNQ ++ +L K+
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNQPDYKVVVDKMRAELAKA 222
>gi|319745736|gb|EFV98033.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae ATCC
13813]
Length = 220
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +I A AG DI+T H E++ HI +L+ I G K GV INP TPV
Sbjct: 65 DCHLMVVDPERYIEAFAQAGADIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L ++D +D ILIMTVNPGFGGQ I + K++ A + +EVDGG+ + I
Sbjct: 125 LIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHYYDIEVDGGIDNTTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ +AGA++ V GS F + + L
Sbjct: 185 KAAAEAGANVFVAGSYLFKASDLPAQVETLR 215
>gi|91777687|ref|YP_552895.1| ribulose-5-phosphate 3-epimerase [Burkholderia xenovorans LB400]
gi|91690347|gb|ABE33545.1| ribulose-5-phosphate 3-epimerase [Burkholderia xenovorans LB400]
Length = 239
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+ADF+RL +EI ++T AGA IH DVMD +VPN++ G V ++R ++
Sbjct: 1 MRDFLIAPSLLSADFARLADEIRDVTAAGADWIHLDVMDNHYVPNLTVGPLVCAAIRPHT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM +DS + A+AG + I+FHPE+S H+ R++ I + G + G+A+NP T
Sbjct: 61 SVPIDVHLMTMPVDSLVAGFAEAGANTISFHPEASLHVHRTIELIKSSGARAGLALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+A+L+ VI+ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVD
Sbjct: 121 PLAVLDHVIERLDVVLVMSVNPGFGGQAFIPETLDKLRALRERVDATMQRTGRLLLIEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV + NI + +GAD+ V GS+ F + D
Sbjct: 181 GGVKAANIARIAASGADVFVAGSAVFGADDYAQAIGEMRD 220
>gi|85860497|ref|YP_462699.1| ribulose-phosphate 3-epimerase [Syntrophus aciditrophicus SB]
gi|85723588|gb|ABC78531.1| ribulose-phosphate 3-epimerase [Syntrophus aciditrophicus SB]
Length = 228
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 105/217 (48%), Positives = 150/217 (69%), Gaps = 2/217 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+EI+ + AGA IH DVMDG FVPN++ G V++SLR + F
Sbjct: 3 KIAPSILSADFSRLGDEIAAVEAAGADWIHIDVMDGHFVPNLTIGPPVVKSLRKVTRLPF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + DS+++ DAGCDI+T H E++ H+ R++ I G GV++NP TP+++
Sbjct: 63 DVHLMIDNPDSYLDAFIDAGCDILTVHAEAAVHLHRTISYIRERGVSAGVSVNPATPLSL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LED++ ++D++LIMTVNPGFGGQQ I + +PKIR+AKA+I I +EVDGG+ NI
Sbjct: 123 LEDILPDLDLLLIMTVNPGFGGQQFIPTMLPKIRKAKAMISAVSPRIVIEVDGGINLDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ QAGAD+LV GS+ F + L +++
Sbjct: 183 STVAQAGADVLVAGSAVFASGDYGLTLPAMRALLENS 219
>gi|320547546|ref|ZP_08041832.1| ribulose-phosphate 3-epimerase [Streptococcus equinus ATCC 9812]
gi|320447891|gb|EFW88648.1| ribulose-phosphate 3-epimerase [Streptococcus equinus ATCC 9812]
Length = 220
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNI+FGADV+ S+R +S +F
Sbjct: 5 KIAPSILAADYANFASELKRIEETSAEYVHIDIMDGQFVPNITFGADVVASMRKHSKLIF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + ++ A AG DI+T H ES+ H+ +L+ I G K GV INP TPV+
Sbjct: 65 DCHLMVVNPERFVDAFAQAGADIMTIHAESTLHVHGALQKIKKAGMKAGVVINPGTPVSA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V+ +D +LIMTVNPGFGGQ I + K+ + + ++ +EVDGGV ++ I
Sbjct: 125 IEPVLSLVDQVLIMTVNPGFGGQAFIPEMLEKVEKVAKIRDEKGYDFDIEVDGGVDNKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ QAGA++ V GS F + + L
Sbjct: 185 KACYQAGANVFVAGSYLFKATDLAAQVETLR 215
>gi|220903759|ref|YP_002479071.1| Ribulose-phosphate 3-epimerase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868058|gb|ACL48393.1| Ribulose-phosphate 3-epimerase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 242
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 136/218 (62%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+ADFSRL EE+ + AG +H DVMDG FVPNI+FG +I++LR S
Sbjct: 1 MILSPSLLSADFSRLAEELQALEAAGVTWLHLDVMDGAFVPNITFGPPLIKALRPGSGLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + +I DAG D++ H E+ H +R+L I MG + GVA+NP T +
Sbjct: 61 FDVHLMVENPARYIQDFRDAGADMLVIHTEADRHPQRTLAAIRDMGCRAGVALNPGTDLG 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSR 181
+ +++++DM+L+M+VNPGF GQ I +T K+R A+ L G + ++VDGGV
Sbjct: 121 AIRWLVNDLDMLLVMSVNPGFSGQAFIPATFDKVRSARRLLDACGGEDVLIQVDGGVCPE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N LV+AGAD+LV GS+FF K Y RL KS
Sbjct: 181 NTAQLVEAGADVLVSGSAFFGHK---PYDARLAAFMKS 215
>gi|311747261|ref|ZP_07721046.1| ribulose-phosphate 3-epimerase [Algoriphagus sp. PR1]
gi|126578972|gb|EAZ83136.1| ribulose-phosphate 3-epimerase [Algoriphagus sp. PR1]
Length = 219
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 102/216 (47%), Positives = 141/216 (65%), Gaps = 2/216 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSILAADF+ L E+ + + A IH D+MDG FVPNISFG V ++++ +++
Sbjct: 2 SLLIAPSILAADFANLQTEVEMLNSSSADYIHVDIMDGVFVPNISFGIPVTQAIKKHAEK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D ++ DAG DII+ H E+ PH+ RSL+ I A+G K GVAINP T +
Sbjct: 62 PLDVHLMIVEPDRYLEAFRDAGADIISVHYEACPHLHRSLQAIKALGAKAGVAINPHTSI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+L+DVI +ID++ +M+VNPGFGGQ+ IE+T KI + K LI + +E+DGGV +
Sbjct: 122 DLLKDVIQDIDLVCMMSVNPGFGGQKFIENTYDKIARLKDLILSKGASTKIEIDGGVNIQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N L++AGAD+LV GS FN I K L +K
Sbjct: 182 NAPKLIEAGADVLVAGSFVFNSPQPIETIKELKSIK 217
>gi|225869262|ref|YP_002745210.1| ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
zooepidemicus]
gi|225702538|emb|CAX00492.1| putative ribulose-phosphate 3-epimerase [Streptococcus equi subsp.
zooepidemicus]
Length = 220
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 135/216 (62%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S++I PSILAAD++ E++ I K A+ +H D+MDG FVPNISFGADV+ S+R +S
Sbjct: 1 MSSLKIAPSILAADYACFAAELARIEKTDAEYVHIDIMDGQFVPNISFGADVVASMRKHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+ + + ++ A AG DI+T H ES+ H +L+ I A G K GV INP T
Sbjct: 61 KLVFDCHLMVVNPERYVEAFAQAGADIMTIHVESTLHSHGALQKIRAAGMKAGVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV+ +E ++ +D +LIMTVNPGFGGQ I + K+ + +R + +EVDGGV
Sbjct: 121 PVSAVEPLLSLVDQVLIMTVNPGFGGQAFIPECLEKVAAIAKMRDERGLSFDIEVDGGVD 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ I++ QAGA++ V GS F + + L
Sbjct: 181 DKTIRACYQAGANVFVAGSYLFKVADLAAQVQTLRA 216
>gi|71282136|ref|YP_267237.1| ribulose-phosphate 3-epimerase [Colwellia psychrerythraea 34H]
gi|71147876|gb|AAZ28349.1| ribulose-phosphate 3-epimerase [Colwellia psychrerythraea 34H]
Length = 224
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+A+F+RLG++++ + AGA +HFDVMD FVPN++FG + +SLR Y
Sbjct: 1 MSP-FLIAPSILSANFARLGDDVAKVLAAGADVVHFDVMDNHFVPNLTFGPMICKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ++D+ I A+AG DIITFHPE+S HI RSL+ I G K G+ +NP
Sbjct: 60 GITAPIDVHLMVKNVDTLIPGFAEAGADIITFHPEASDHIDRSLQLIKDNGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+R K I + + +VDGG
Sbjct: 120 ATPLHCLDFVMDKLDVILLMSVNPGFGGQSFIPTTLDKLRLVKEKIKQSGYDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI + AGAD+ V GS+ F+Q Y +++++ +
Sbjct: 180 VKANNIAEIADAGADMFVAGSAIFSQDD---YKVAIDEMRAELAKV 222
>gi|255065912|ref|ZP_05317767.1| ribulose-phosphate 3-epimerase [Neisseria sicca ATCC 29256]
gi|255049823|gb|EET45287.1| ribulose-phosphate 3-epimerase [Neisseria sicca ATCC 29256]
Length = 227
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 103/229 (44%), Positives = 149/229 (65%), Gaps = 9/229 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MNHNFRIAPSILSADFARLGEEVTKVIEAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I G + G+ +NP
Sbjct: 61 ATVPIDVHLMVEPVDDLIQAFAKAGASIITFHPEASRHIDRSLSLIKDAGCQAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EV
Sbjct: 121 TPAYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEAQSGRHIAIEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGG+ + NI ++ AGAD V GS+ F + Y ++ ++K ++
Sbjct: 181 DGGIKTDNIAAVAAAGADTFVAGSAIFGKPD---YKAVIDAMRKELASV 226
>gi|163797842|ref|ZP_02191787.1| pentose-5-phosphate-3-epimerase [alpha proteobacterium BAL199]
gi|159176886|gb|EDP61453.1| pentose-5-phosphate-3-epimerase [alpha proteobacterium BAL199]
Length = 221
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PSIL+ADF+RLGEE+ + +AGA IH DVMDG FVPN++ G V+++LR +
Sbjct: 1 MPRDILIAPSILSADFARLGEEVRAVAEAGADWIHIDVMDGHFVPNLTIGPAVVKALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D FD HLMIS +D+ + DAG +I+T HPE+ H+ R+L+ + ++G K G+A+NP
Sbjct: 61 TDRTFDVHLMISPVDAFVPAFVDAGAEIVTVHPEAGAHVHRTLQLVRSLGAKAGIALNPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TP+ +L++V+D +D++L+MTVNPGFGGQ IES + KI A+A I R I L+VDGGV
Sbjct: 121 TPIEVLDNVMDLVDLVLVMTVNPGFGGQAFIESQLLKIAAARARIDATGRDIRLQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
T++ +V AGAD+LV G++ F Q G YA + LK A
Sbjct: 181 TAKTAPRVVAAGADVLVAGTATF-QGGPAEYAANIARLKAPA 221
>gi|329120989|ref|ZP_08249620.1| ribulose-phosphate 3-epimerase [Dialister micraerophilus DSM 19965]
gi|327471151|gb|EGF16605.1| ribulose-phosphate 3-epimerase [Dialister micraerophilus DSM 19965]
Length = 213
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF+ L +E+ I K+GA +H D+MDG FVPN++FG +I ++R ++
Sbjct: 1 MKIAPSLLSADFANLEKEVREIEKSGADLLHLDMMDGHFVPNLTFGVPIINAIRKHTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ + + +++ + G +I+FH E+S H R ++ I K G+AINP T +
Sbjct: 61 FDIHMMVFNPEKYLSELEKVGVQMISFHQEASIHQDRIIQEIKERKIKAGIAINPATSIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ +D +LIM+VNPGFGGQ+ I T+ K+++ K +I + +EVDGG+ + N
Sbjct: 121 NIEPILPILDYVLIMSVNPGFGGQKFIYYTLEKVKKLKKIIQNNGYNTLIEVDGGIKAEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ L AGAD+ V GS+ F + L
Sbjct: 181 IQLLKDAGADICVAGSAVFGKPDRKKAIDILK 212
>gi|264680604|ref|YP_003280514.1| ribulose-phosphate 3-epimerase [Comamonas testosteroni CNB-2]
gi|262211120|gb|ACY35218.1| ribulose-phosphate 3-epimerase [Comamonas testosteroni CNB-2]
Length = 226
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 148/227 (65%), Gaps = 11/227 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + ++L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPH 60
Query: 61 S------DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S D HLM+ +D A AG D I+FHP++S H+ RS++ I A G K G
Sbjct: 61 SVTPDGKPVPIDVHLMVQPVDDLATAFAKAGADYISFHPDASQHVHRSVQNIKAHGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP + +L+ +I++ID+IL+M+VNPGFGGQ I+ST+ KI +A+ LI + I L
Sbjct: 121 LVFNPAASLEVLDWMIEDIDLILLMSVNPGFGGQSFIDSTLRKIEKARKLIDASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
EVDGG+ NI+++ AGAD V GS+ F + Y ++ ++K+
Sbjct: 181 EVDGGIKEANIRAVADAGADTFVAGSAIFGKPD---YKAVIDTMRKN 224
>gi|225874149|ref|YP_002755608.1| ribulose-phosphate 3-epimerase [Acidobacterium capsulatum ATCC
51196]
gi|225792644|gb|ACO32734.1| ribulose-phosphate 3-epimerase [Acidobacterium capsulatum ATCC
51196]
Length = 223
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 131/209 (62%), Gaps = 2/209 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+++PSILA+DF+RL +E+ G IH DVMDG FVPN++ G +++SLR ++
Sbjct: 2 IELLPSILASDFARLADEVHAAEAGGGTVIHVDVMDGHFVPNLTLGPPLVKSLRKHTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ D + A+AG + ++ H E+ PH+ RSL I G + GV INP TPV
Sbjct: 62 FDVHMMVERPDDFVAAFAEAGANWMSVHYEACPHLHRSLSLIREHGMEPGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ V+ + +L+M+VNPGFGGQ+ I ++ KIR+ K L + + +EVDGGV +
Sbjct: 122 VILPVLPMVHHVLVMSVNPGFGGQKFIPFSLDKIRRLKELRQELGLTFRIEVDGGVDAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I S+V AGADLLV GS+ F A+
Sbjct: 182 IASVVTAGADLLVAGSAVFGGGHAEQQAR 210
>gi|255535496|ref|YP_003095867.1| Ribulose-phosphate 3-epimerase [Flavobacteriaceae bacterium
3519-10]
gi|255341692|gb|ACU07805.1| Ribulose-phosphate 3-epimerase [Flavobacteriaceae bacterium
3519-10]
Length = 216
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 132/216 (61%), Gaps = 3/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ADF L +I + ++ A +H DVMDG FVPNISFG V+++++ +
Sbjct: 1 MKTKL-IAPSLLSADFGNLQRDIEMLNRSQADWLHIDVMDGRFVPNISFGFPVMKAVQQH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + ++ G D+I+ H E+ H+ R++ I G K GV +NP
Sbjct: 60 SKKFVDVHLMIVEPEKYVEEFIRMGADLISVHYEACTHLHRTISLIQESGAKAGVVLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV +LED+I ++D++L+M+VNPGFGGQ+ I +T KI + K LI + +EVDGGV
Sbjct: 120 TPVLMLEDIIADVDLVLLMSVNPGFGGQKFINNTYKKIAETKDLILSNNSTALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N L +AGAD+LV G++ F+ + + L
Sbjct: 180 NLENAGKLFEAGADVLVAGNAVFSSENPERTIELLK 215
>gi|76788542|ref|YP_330395.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae A909]
gi|77406267|ref|ZP_00783334.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae H36B]
gi|77412122|ref|ZP_00788446.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae CJB111]
gi|76563599|gb|ABA46183.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae A909]
gi|77161829|gb|EAO72816.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae CJB111]
gi|77175120|gb|EAO77922.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae H36B]
Length = 220
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +I A AG DI+T H E++ HI +L+ I G K GV INP TPV
Sbjct: 65 DCHLMVVDPERYIEAFAQAGTDIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L ++D +D ILIMTVNPGFGGQ I + K++ A + +EVDGG+ + I
Sbjct: 125 LIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ +AGA++ V GS F + + L
Sbjct: 185 KAAAEAGANVFVAGSYLFKASDLPAQVETLR 215
>gi|194333334|ref|YP_002015194.1| Ribulose-phosphate 3-epimerase [Prosthecochloris aestuarii DSM 271]
gi|194311152|gb|ACF45547.1| Ribulose-phosphate 3-epimerase [Prosthecochloris aestuarii DSM 271]
Length = 221
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + PSIL+ADF++LG I KAGA +H DVMDG FVPNI+FG +I+++ S
Sbjct: 3 AKTTLLAPSILSADFTQLGNSIQLAEKAGADWLHCDVMDGHFVPNITFGPFIIQAIAKCS 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMIS D +I AG +T H E+ PH+ RS++ I ++G K GV+INP T
Sbjct: 63 SMTIDTHLMISDPDRYIPDFIKAGSHQVTVHQETCPHLHRSVQLIKSLGAKAGVSINPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P++ LE +I E+DM+L+M+VNPGFGGQ+ I S++ KI++ + + + VDGGVT
Sbjct: 123 PISTLEAIIGELDMVLLMSVNPGFGGQKFIPSSVEKIKKLHEMRNAMNPDMVIAVDGGVT 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N + LV AGAD L+ G++FF + A ++
Sbjct: 183 VDNAQELVSAGADALIAGTAFFKAENPAEAAAQIKS 218
>gi|91762550|ref|ZP_01264515.1| Ribulose-phosphate 3-epimerase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718352|gb|EAS85002.1| Ribulose-phosphate 3-epimerase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 219
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI PSIL+ADFS+L EI + + GA IH DVMDG FVPN++ G +I+SLR ++
Sbjct: 1 MKKIQISPSILSADFSQLRNEIKRLEEGGADMIHVDVMDGHFVPNLTMGPPIIKSLRKFT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLMIS + +I ADAG DIIT HPE++ ++ S+ I ++GKK GV++NPE+
Sbjct: 61 KLPFDVHLMISPVHKYIKDYADAGADIITIHPEATENLAVSINHIKSLGKKVGVSLNPES 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
+ ++ D++++ID++LIM+VNPGFGGQ+ + + KI++ K + +++I +E+DGG+
Sbjct: 121 KINLITDLLNQIDLVLIMSVNPGFGGQKFMPEVLEKIKELKKIRDQKNIDFDIEIDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N K ++AGA++LV G++ F K ++ LK S
Sbjct: 181 FDNNKLAIEAGANILVSGTTIFKNNNG-DIKKNIDLLKSS 219
>gi|304316967|ref|YP_003852112.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778469|gb|ADL69028.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 217
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF L +I K + +H DVMDG FVPNI+ G VI++L+ ++
Sbjct: 1 MEISPSILSADFGNLLSDIKKAEKEKPEFLHIDVMDGHFVPNITIGPLVIKALKGKTNIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I A+AG IT H E+ H+ R+L+ I +MG VA+NP TP+
Sbjct: 61 FDVHLMIEDADKYIKEFAEAGAKNITVHQEACLHLDRTLQFIKSMGIMASVALNPATPLE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
L+ V+ +DM+LIMTVNPGFGGQ IE KIR+ + R + +EVDGG+ N
Sbjct: 121 TLKYVLPSVDMVLIMTVNPGFGGQVFIEEMYEKIRELAYIRESRGLNFKIEVDGGINVDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +V AGAD++V GSS F K+L
Sbjct: 181 INDVVFAGADVIVAGSSIFGSGDPGDNIKKLR 212
>gi|118603031|ref|YP_904246.1| ribulose-5-phosphate 3-epimerase [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567970|gb|ABL02775.1| ribulose-5-phosphate 3-epimerase [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 223
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 140/220 (63%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSILAADF+RLGEE+ N+ + GA IHFDVMD +VPN++ G V +LR++
Sbjct: 1 MKQTNFIAPSILAADFTRLGEEVDNVLRDGADIIHFDVMDNHYVPNLTIGPLVCEALRNH 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ ++ I AG ITFHPE+S HI R+L I K G+ NP
Sbjct: 61 GVSAPIDVHLMVKPVNRIIPDFIKAGASYITFHPEASEHIDRTLSMIQEESCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ ILE+V+D++DMIL+M+VNPGFGGQ I T+ K R+ + LI ++I LE+DGG
Sbjct: 121 ATPLHILENVMDKLDMILLMSVNPGFGGQSFIPHTLEKCRKVRKLIDASGKNIRLEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI+ + +AGAD V GS+ F+ Y K ++ ++
Sbjct: 181 VKIDNIREVAKAGADTFVAGSAIFSTDD---YKKTIDAMR 217
>gi|260171880|ref|ZP_05758292.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D2]
gi|315920192|ref|ZP_07916432.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694067|gb|EFS30902.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 216
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 135/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + I + G + H E+ PH+ R ++ I G + V INP
Sbjct: 59 SQKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV G++ F + ++L++L
Sbjct: 179 NLETGARLVEAGADVLVAGNAVFAAPDPEAMIRQLHEL 216
>gi|315611878|ref|ZP_07886797.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis ATCC 49296]
gi|315316056|gb|EFU64089.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis ATCC 49296]
Length = 241
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 137/216 (63%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 28 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 87
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV +
Sbjct: 88 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEV 147
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 148 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 207
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 208 SQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 239
>gi|114561569|ref|YP_749082.1| ribulose-phosphate 3-epimerase [Shewanella frigidimarina NCIMB 400]
gi|114332862|gb|ABI70244.1| ribulose-5-phosphate 3-epimerase [Shewanella frigidimarina NCIMB
400]
Length = 223
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 136/218 (62%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG+++ + AG+ +HFDVMD +VPN++ G V +LR+Y
Sbjct: 1 MRP-FLIAPSILSADFARLGDDVKAVLDAGSDVVHFDVMDNHYVPNLTIGPMVCTALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 GITADIDVHLMVKPVDRIIPDFAKAGASIITFHPEASEHIDRTLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP+ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ +A+I + +VDGG
Sbjct: 120 GTPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPHTLEKLRQVRAIIDASGFDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD+ V GS+ FNQ ++
Sbjct: 180 VKVDNIAEIAAAGADMFVAGSAIFNQPDYKVVIDQMRA 217
>gi|323447374|gb|EGB03298.1| Ribulose-phosphate 3-epimerase [Aureococcus anophagefferens]
Length = 241
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 141/225 (62%), Gaps = 4/225 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS- 61
I PSIL+ADF+RLGEE+ N AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 8 KDFLIAPSILSADFARLGEEVVNSLSAGADVVHFDVMDNHYVPNLTIGPMVCSALRKHGV 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+S +D + ADAG ITFHPE+SPH+ R+L+ I G K G+ NP T
Sbjct: 68 TAPIDVHLMVSPVDRIVGDFADAGASYITFHPEASPHVDRTLQLIRGAGCKAGLVFNPAT 127
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVT 179
P+ IL+ V+D++D+IL+M+VNPGFGGQ I +T+ K R+A+ LI + E+DGGV+
Sbjct: 128 PLDILKYVMDKVDIILLMSVNPGFGGQSFIPATLDKAREARKLIDASGYDIRLEIDGGVS 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKSALAI 223
NIK + +AG D+ V GS+ F E Y ++ ++ A
Sbjct: 188 GANIKEVAEAGVDMFVAGSAIFRDPRTEEDYKVTIDAMRDELAAA 232
>gi|319945540|ref|ZP_08019800.1| ribulose-phosphate 3-epimerase [Lautropia mirabilis ATCC 51599]
gi|319741326|gb|EFV93753.1| ribulose-phosphate 3-epimerase [Lautropia mirabilis ATCC 51599]
Length = 240
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 138/223 (61%), Gaps = 7/223 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+L+ADF RL EE+ I AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 16 TYRIAPSMLSADFGRLKEEVQAIEAAGADLLHFDVMDNHYVPNLTVGPMVCKALRPHIRM 75
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+S +DS ADAG DIITFHPE+SPH+ R+L+ I + G K G+ NP TP+
Sbjct: 76 PIDVHLMVSPVDSLAAAFADAGADIITFHPEASPHVDRTLQLIRSRGCKAGLVFNPATPL 135
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+ L+ +D++D++L+M+VNPGFGGQ I T+ K+R A+ I R I LEVDGG
Sbjct: 136 SWLDYTLDQLDIVLLMSVNPGFGGQSFIPGTLAKLRDARQRIDAEKARSGRDIWLEVDGG 195
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEI-SYAKRLNDLKKS 219
V NI + AGAD V GS+ F Y L +++
Sbjct: 196 VKVDNIAEIAAAGADTFVAGSAVFGAPDPDGGYHGVLKRFREA 238
>gi|88704587|ref|ZP_01102300.1| Ribulose-phosphate 3-epimerase [Congregibacter litoralis KT71]
gi|88700908|gb|EAQ98014.1| Ribulose-phosphate 3-epimerase [Congregibacter litoralis KT71]
Length = 224
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 105/219 (47%), Positives = 145/219 (66%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ ++ AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 8 IAPSILSADFARLGEEVDSVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRKHGVTAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I ADAG ITFHP++S H+ RSL+ I G K G+ +NP +
Sbjct: 68 DVHLMVSPVDQLIGDFADAGASFITFHPDASTHVDRSLQMIRDAGCKAGLVLNPHVGLDD 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L V+D++DMIL+M+VNPGFGGQ I ST+ K+R+A+ALI +++ EVDGGVT NI
Sbjct: 128 LTYVMDKLDMILLMSVNPGFGGQSFIPSTLTKLREARALIDASGLNIRLEVDGGVTPTNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ AGAD V GS+ F Q YA + +++ SALA
Sbjct: 188 AEIAAAGADTFVAGSAIFGQDD---YAAVIAEMR-SALA 222
>gi|309798996|ref|ZP_07693253.1| ribulose-phosphate 3-epimerase [Streptococcus infantis SK1302]
gi|308117400|gb|EFO54819.1| ribulose-phosphate 3-epimerase [Streptococcus infantis SK1302]
Length = 218
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ KIR+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKIRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQALRKQ 216
>gi|116618603|ref|YP_818974.1| ribulose-5-phosphate 3-epimerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097450|gb|ABJ62601.1| ribulose-5-phosphate 3-epimerase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 218
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 134/215 (62%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+AD++ L ++ + AGA+ +H DVMDG FVP IS+G + ++ LR +D V
Sbjct: 4 IIAPSILSADYTNLERDVKLVEAAGAEYLHIDVMDGTFVPAISYGPNWVKQLRPETDLVL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + + ADAG DII H E++PHI R+L+ I G K V INP TPV+
Sbjct: 64 DVHLMIQNPERFVEEFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVSA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+E V+D +D +L+MTVNPGFGGQ+ + ST+ KI Q + +R +E+DGGV + I
Sbjct: 124 IEAVLDMVDQVLVMTVNPGFGGQKFLPSTLQKIEQLQTFREERGFDFDIEIDGGVNNETI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
KS AGA + V GS +++ + L DL K
Sbjct: 184 KSAYDAGAKVFVAGSYVYDKVDPAAKIGILKDLIK 218
>gi|24559829|gb|AAN61151.1| CbbE [Bradyrhizobium japonicum]
Length = 245
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 116/222 (52%), Positives = 155/222 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSILAADF+RLGEEI+ I AGA IH DVMDG FVPNISFGADVI+++R
Sbjct: 1 MTSEILIAPSILAADFARLGEEIAAIDAAGADWIHCDVMDGHFVPNISFGADVIKAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ VFD HLMI+ +D +++ A AG D+IT H E+ PH+ R+L+ + A+GKK GV++ P
Sbjct: 61 TKKVFDVHLMIAPVDPYLDAFAKAGADVITVHAEAGPHLDRTLQAVRALGKKAGVSLCPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +E V+D ID++L+MTVNPGFGGQ +ES + KI++ + +IG R I LEVDGG+T
Sbjct: 121 TSEGAIEYVLDRIDLVLVMTVNPGFGGQSFLESQLEKIKRIRTVIGDRPIRLEVDGGITR 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
N ++ AGAD LV GS+ F K YA + ++ +A A
Sbjct: 181 ENAVAVAAAGADTLVAGSAVFRGKSSADYAGNIAAIRVAAEA 222
>gi|27377699|ref|NP_769228.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
gi|27350844|dbj|BAC47853.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
Length = 245
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 116/222 (52%), Positives = 155/222 (69%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSILAADF+RLGEEI+ I AGA IH DVMDG FVPNISFGADVI+++R
Sbjct: 1 MTSEILIAPSILAADFARLGEEIAAIDAAGADWIHCDVMDGHFVPNISFGADVIKAIRPV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ VFD HLMI+ +D +++ A AG D+IT H E+ PH+ R+L+ + A+GKK GV++ P
Sbjct: 61 TKKVFDVHLMIAPVDPYLDAFAKAGADVITVHAEAGPHLDRTLQAVRALGKKAGVSLCPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +E V+D ID++L+MTVNPGFGGQ +ES + KI++ + +IG R I LEVDGG+T
Sbjct: 121 TSEGAIEYVLDRIDLVLVMTVNPGFGGQSFLESQLEKIKRIRTVIGDRPIRLEVDGGITR 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
N ++ AGAD LV GS+ F K YA + ++ +A A
Sbjct: 181 ENAAAVAAAGADTLVAGSAVFRGKSSADYAGNIAAIRVAAEA 222
>gi|332292551|ref|YP_004431160.1| ribulose-phosphate 3-epimerase [Krokinobacter diaphorus 4H-3-7-5]
gi|332170637|gb|AEE19892.1| ribulose-phosphate 3-epimerase [Krokinobacter diaphorus 4H-3-7-5]
Length = 220
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 103/219 (47%), Positives = 140/219 (63%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ ++ I PSILAADF+ L +I I + A H D+MDG FVPNISFG V+R + +
Sbjct: 1 MSTTL-IAPSILAADFANLQRDIEMINASEADWFHIDIMDGVFVPNISFGMPVLRDIAKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D ++ AD G +I+T H E+ H+ R+L+ I A G K GVA+NP
Sbjct: 60 AKKTIDVHLMIVDPDRYVQTFADLGANILTVHYEACTHLHRTLQVIKAAGMKAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV+ LEDVI +ID++ +M+VNPGFGGQQ IE+T K+ KALI K++ +E+DGGV
Sbjct: 120 TPVSHLEDVIQDIDLVCMMSVNPGFGGQQFIENTYDKVAALKALITKKNAPTLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +N LVQAGAD+LV GS F K L ++
Sbjct: 180 SDKNAAQLVQAGADVLVAGSFIFKSSNPTETIKELKNIA 218
>gi|290961868|ref|YP_003493050.1| ribulose-phosphate 3-epimerase [Streptomyces scabiei 87.22]
gi|260651394|emb|CBG74516.1| ribulose-phosphate 3-epimerase [Streptomyces scabiei 87.22]
Length = 228
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL + +
Sbjct: 2 AAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATQT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALRPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPFEDLLPELDMVLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLDLWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ +AGAD+ V GS+ + + + L
Sbjct: 180 TVERCAEAGADIFVAGSAVYGAEDPAEAVRALR 212
>gi|25011858|ref|NP_736253.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae NEM316]
gi|77414162|ref|ZP_00790327.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 515]
gi|24413399|emb|CAD47478.1| unknown [Streptococcus agalactiae NEM316]
gi|77159785|gb|EAO70931.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 515]
Length = 220
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +I A AG DI+T H E++ HI +L+ I G K GV INP TPV
Sbjct: 65 DCHLMVVDPERYIEDFAQAGADIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L ++D +D ILIMTVNPGFGGQ I + K++ A + +EVDGG+ + I
Sbjct: 125 LIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ +AGA++ V GS F + + L
Sbjct: 185 KAAAEAGANVFVAGSYLFKASDLPAQVETLR 215
>gi|296113297|ref|YP_003627235.1| ribulose-5-phosphate 3-epimerase [Moraxella catarrhalis RH4]
gi|295920991|gb|ADG61342.1| ribulose-5-phosphate 3-epimerase [Moraxella catarrhalis RH4]
gi|326561980|gb|EGE12313.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 46P47B1]
gi|326570205|gb|EGE20250.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis BC8]
gi|326573237|gb|EGE23205.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 101P30B1]
gi|326575861|gb|EGE25784.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis CO72]
gi|326576946|gb|EGE26852.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis O35E]
Length = 226
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/218 (45%), Positives = 143/218 (65%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSIL+ADF+RLG +I ++ +AGA +HFDVMD +VPN++FG+ + ++L+ Y
Sbjct: 1 MTQPFLIAPSILSADFARLGADIESVLEAGADVVHFDVMDNHYVPNLTFGSMICQALKDY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I AG DIITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 61 GITAPIDVHLMVKPVDGMIEQFLKAGADIITFHPEASEHIDRSLQLIKDGGAKCGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ +D++D IL+M+VNPGFGGQ+ I++T+ K+ + +I R I LEVDGG
Sbjct: 121 ATPLYYLDHTLDKVDQILLMSVNPGFGGQKFIDATLDKLATVRQMIDDSGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+++ +AGAD+ V GS+ FNQ + + D
Sbjct: 181 VNVANIRTIGEAGADMFVAGSAIFNQPNYKAVIDAMRD 218
>gi|261856693|ref|YP_003263976.1| ribulose-phosphate 3-epimerase [Halothiobacillus neapolitanus c2]
gi|261837162|gb|ACX96929.1| ribulose-phosphate 3-epimerase [Halothiobacillus neapolitanus c2]
Length = 231
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 93/226 (41%), Positives = 136/226 (60%), Gaps = 7/226 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I PSIL+A+F+ LG+E+ + +GA +HFDVMD +VPN++ G V +LR + +
Sbjct: 4 FIIAPSILSANFAALGDEVDKVIASGADWVHFDVMDNHYVPNLTIGPLVCEALRKHGVTA 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A AG ITFHPE+S H+ RSL+ I G K+G+ NP TP+
Sbjct: 64 PIDVHLMVKPVDRIIPDFAKAGATYITFHPEASEHVDRSLQLIRDHGCKSGLVFNPATPL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG---KRSISLEVDGGVTS 180
+LE I+++DMIL+M+VNPGFGGQ+ I + K R A+ +I + I LE+DGGV+
Sbjct: 124 DVLEYAIEKVDMILLMSVNPGFGGQKFIPYVLDKARAARKIIDASGRTDIRLEIDGGVSP 183
Query: 181 RNIKSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLKKSALAI 223
NI+ + +AG D V GS+ F N Y L++ + +
Sbjct: 184 ANIREIAEAGVDTFVSGSALFGKANSSDANRYDTILSEFRAELAKV 229
>gi|322375825|ref|ZP_08050336.1| ribulose-phosphate 3-epimerase [Streptococcus sp. C300]
gi|321279093|gb|EFX56135.1| ribulose-phosphate 3-epimerase [Streptococcus sp. C300]
Length = 241
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 28 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 87
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 88 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVDINPGTPVEA 147
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 148 IKHVLHLVDQVLVMTVNPGFGGQTFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 207
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 208 SQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 239
>gi|322373746|ref|ZP_08048282.1| ribulose-phosphate 3-epimerase [Streptococcus sp. C150]
gi|321278788|gb|EFX55857.1| ribulose-phosphate 3-epimerase [Streptococcus sp. C150]
Length = 239
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ + +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 22 SYKIAPSILAADYANFASELARVDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 81
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + +++ A AG DI+T H E++ HI +L+ I A G K G INP TPV
Sbjct: 82 VFDCHLMVVDPERYVDAYAQAGADIMTIHVEATKHIHGALQKIKAAGMKAGAVINPGTPV 141
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L V+D +D +LIMTVNPGFGGQ I + K+ + L K S +EVDGGV ++
Sbjct: 142 EALIPVLDLVDQVLIMTVNPGFGGQAFIPEMMSKVERVVELRQKGGYSFDIEVDGGVDNK 201
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 202 TIAACAKAGANVFVAGSYLFKNPDLTAQVQTLRD 235
>gi|119502713|ref|ZP_01624798.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2080]
gi|119461059|gb|EAW42149.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2080]
Length = 224
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V ++LR++
Sbjct: 1 MT-DFKIAPSILSADFARLGEEVDTVLAAGADIVHFDVMDNHYVPNLTIGPMVCQALRNH 59
Query: 61 SD-SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D+ I++ ADAG ITFHP++S H+ RSL+ I G K+G+ NP
Sbjct: 60 GVVAPIDVHLMVQPVDNLISMFADAGATYITFHPDASTHVDRSLQLIRGAGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
+ L+ V+D++DMIL+M+VNPGFGGQ+ I +T+ K+R+ +ALI + + EVDGG
Sbjct: 120 AASLEALKYVMDKVDMILLMSVNPGFGGQKFIPATLDKLREVRALIDASGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V NI + AGAD V GS+ FNQ Y ++++++ ++
Sbjct: 180 VGPGNIAEIAAAGADTFVAGSAIFNQPD---YRAVIDEMRRELASV 222
>gi|302550111|ref|ZP_07302453.1| ribulose-phosphate 3-epimerase [Streptomyces viridochromogenes DSM
40736]
gi|302467729|gb|EFL30822.1| ribulose-phosphate 3-epimerase [Streptomyces viridochromogenes DSM
40736]
Length = 228
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL +D+
Sbjct: 2 AAQINPSILSADFARLADEAKAVQ--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDT 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PLDCHLMIEAPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++
Sbjct: 120 EPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSAS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ AGAD+ V GS+ + + L
Sbjct: 180 TIERCADAGADVFVAGSAVYGANDPAEAVRALR 212
>gi|148262277|ref|YP_001228983.1| ribulose-phosphate 3-epimerase [Geobacter uraniireducens Rf4]
gi|146395777|gb|ABQ24410.1| ribulose-5-phosphate 3-epimerase [Geobacter uraniireducens Rf4]
Length = 221
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 98/217 (45%), Positives = 144/217 (66%), Gaps = 5/217 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 3 KIAPSILSADFSRLGDEVRAVEAAGADYIHIDVMDGHFVPNITIGPLVVEAVRKVTRLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I A AG DII H E++ H+ R+++ I + GKK GV++NP T +
Sbjct: 63 DVHLMIDAPDRYIGDFAKAGADIIVVHAEATNHLHRTVQLIKSFGKKAGVSLNPATTLHT 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ +++E+D+IL+MTVNPGFGGQ I++ +PKI+ + ++ K+ + LEVDGGV + NI
Sbjct: 123 LDYILEELDLILLMTVNPGFGGQSFIDACLPKIQALRGMLDKKGLETELEVDGGVKASNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGAD+ V GS+ F YA + ++K+ A
Sbjct: 183 DRIAHAGADVFVAGSAVFGSDD---YAATIAEMKRRA 216
>gi|325954753|ref|YP_004238413.1| ribulose-phosphate 3-epimerase [Weeksella virosa DSM 16922]
gi|323437371|gb|ADX67835.1| ribulose-phosphate 3-epimerase [Weeksella virosa DSM 16922]
Length = 215
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 136/210 (64%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSILA+DF+ LG++I + + A+ H DVMDG FVPNIS+G +I + ++ V
Sbjct: 3 IIAPSILASDFAHLGKDIEMVNNSQAQWFHLDVMDGVFVPNISYGMPIIDRINQLTNKVL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +I + G DI+T H E+S H+ R+++ I G K GVA+NP TPV++
Sbjct: 63 DVHLMIVEPERYITAFREVGADILTVHYEASTHLHRTIQAIKVEGMKAGVALNPHTPVSV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ED+I+E+D++L+M+VNPGFGGQ+ IE+T KI + + + + + +EVDGGV + N
Sbjct: 123 VEDIIEELDLVLVMSVNPGFGGQKFIENTYRKIEKLAEMKKEYNPGLIIEVDGGVNTDNA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
L AGAD LV GS+ FN + Y L
Sbjct: 183 PKLTAAGADALVAGSAVFNAENPTEYIAEL 212
>gi|162148165|ref|YP_001602626.1| ribulose-phosphate 3-epimerase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161786742|emb|CAP56325.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 245
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADFSR+ +E+S + +AGA +H DVMDG FVPN+SFGA +I++LR S VFD
Sbjct: 29 VAPSVLSADFSRMADEVSAVERAGADWLHLDVMDGHFVPNLSFGAQLIKALRPQSSLVFD 88
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D ++ + A AG D I H E+ PH R+L+ I ++G K GVAI P TP +
Sbjct: 89 VHLMMAPVDPYLEMFAQAGADHIHVHIEAGPHTHRTLQHIRSLGVKPGVAICPATPPEAV 148
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+V+D +D+IL+MTVNPGFGGQ+ + S + KIR + L R I + VDGGV
Sbjct: 149 AEVLDLVDVILVMTVNPGFGGQKFLTSQLGKIRTLRRLADATGRDIRIGVDGGVDVETAA 208
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGAD+LV G+S + Q Y + ++ L+++
Sbjct: 209 LATEAGADMLVAGTSVYGQPD---YGRAISALREA 240
>gi|71083025|ref|YP_265744.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062138|gb|AAZ21141.1| Ribulose-phosphate 3-epimerase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 219
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI PSIL+ADFS+L EI + + GA IH DVMDG FVPN++ G +I+SLR ++
Sbjct: 1 MKKIQISPSILSADFSQLRNEIKRLEEGGADMIHVDVMDGHFVPNLTMGPPIIKSLRKFT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLMIS + +I ADAG DIIT HPE++ ++ S+ I ++GKK GV++NPE+
Sbjct: 61 KLPFDVHLMISPVHKYIKDYADAGADIITIHPEATENLAVSIDHIKSLGKKVGVSLNPES 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
+ ++ D++++ID++LIM+VNPGFGGQ+ + + KI++ K + +++I +E+DGG+
Sbjct: 121 KINLITDLLNQIDLVLIMSVNPGFGGQKFMPEVLEKIKELKKIRDQKNIDFDIEIDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N K ++AGA++LV G++ F K ++ LK S
Sbjct: 181 FDNNKLAIEAGANILVSGTTIFKNNNG-DIKKNIDLLKSS 219
>gi|22537915|ref|NP_688766.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 2603V/R]
gi|76798253|ref|ZP_00780502.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 18RS21]
gi|77409022|ref|ZP_00785741.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae COH1]
gi|22534813|gb|AAN00639.1|AE014272_10 ribulose-phosphate 3-epimerase [Streptococcus agalactiae 2603V/R]
gi|76586406|gb|EAO62915.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae 18RS21]
gi|77172363|gb|EAO75513.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae COH1]
Length = 220
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +S VF
Sbjct: 5 KIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + +I A AG DI+T H E++ HI +L+ I G K GV INP TPV
Sbjct: 65 DCHLMVVDPERYIEAFAQAGADIMTIHVEATKHIHGALQKIKEAGMKAGVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L ++D +D ILIMTVNPGFGGQ I + K++ A + +EVDGG+ + I
Sbjct: 125 LIPILDLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+ +AGA++ V GS F + + L
Sbjct: 185 KAAAEAGANVFVAGSYLFKASDLPAQVETLR 215
>gi|38233906|ref|NP_939673.1| ribulose-phosphate 3-epimerase [Corynebacterium diphtheriae NCTC
13129]
gi|38200167|emb|CAE49848.1| ribulose-phosphate 3-epimerase [Corynebacterium diphtheriae]
Length = 224
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSILAADF +L EEI ++ A IH DVMDG FVPN+SFGAD+ + R +
Sbjct: 9 IIAPSILAADFRKLEEEIQSVNH--ADWIHVDVMDGHFVPNLSFGADITCAARLSTSQPL 66
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ ++ AG + FH E++ + R I G + G ++ P TP+
Sbjct: 67 DVHLMIENPENWVDSYIKAGAFTVIFHVEATDNPVDLARHIREQGARAGFSLKPSTPIDP 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
D+++E D +LIM+V PGFGGQ+ + + K+RQ + +I +R++ +E+DGG++ I
Sbjct: 127 YLDMLEEFDEVLIMSVEPGFGGQKFMPEQLEKVRQLRRIIDERNLDVTIEIDGGISESTI 186
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AG D V GS+ F + L + +S
Sbjct: 187 RQAAEAGCDAFVAGSAVFGSDDRNAAIDALRERARS 222
>gi|291286379|ref|YP_003503195.1| ribulose-phosphate 3-epimerase [Denitrovibrio acetiphilus DSM
12809]
gi|290883539|gb|ADD67239.1| ribulose-phosphate 3-epimerase [Denitrovibrio acetiphilus DSM
12809]
Length = 213
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+ADFS L EI I + GA IH D+MDG FVPNI+FGA VI+SLR ++
Sbjct: 1 MIVAPSVLSADFSILASEIKAIDEGGADWIHLDIMDGMFVPNITFGAPVIKSLRKCTEKT 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +I ADAGCD IT H E+ H+ R++ I GKK GV++NP T +
Sbjct: 61 FDAHLMIEAPDRYIKDFADAGCDFITVHEEACTHLHRTVSLIKEYGKKAGVSLNPATSLE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+ +++ +DM+LIM+VNPGFGGQ+ I + KI + K + + + + ++VDGGV ++N
Sbjct: 121 TVREILPYVDMVLIMSVNPGFGGQKFIPTIYDKISRLKKMTEELNPELIIQVDGGVNNQN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I L AG +V GS F Y K +N LK
Sbjct: 181 INDLKNAGCSCVVAGSYVFGCDD---YKKAINSLK 212
>gi|332139915|ref|YP_004425653.1| ribulose-phosphate 3-epimerase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549937|gb|AEA96655.1| ribulose-phosphate 3-epimerase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 225
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 142/218 (65%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ N+ KAGA +HFDVMD +VPN++FG + +LR+Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDVDNVLKAGADVVHFDVMDNHYVPNLTFGPMICEALRNY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I ADAG I+FHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDDLIEKFADAGASYISFHPEASDHIDRSLQLIIDAGCKPGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++ ILIM+VNPGFGGQ+ I ST+ K+R K + + I +E+DGG
Sbjct: 120 ATPLHYLDHVMDKLHHILIMSVNPGFGGQKFIPSTLDKVRAVKQRVLESGYDIRIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+ + +AGAD+ V GS+ F+Q +++ D
Sbjct: 180 VKVDNIRDIAEAGADMFVAGSAIFSQPDYGDVIEQMRD 217
>gi|125624957|ref|YP_001033440.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493765|emb|CAL98757.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071757|gb|ADJ61157.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 220
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 131/215 (60%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF ++ ++ AGA +H DVMDG FV N++FGA V+ +LRS + F
Sbjct: 4 KIAPSILSADFGNFARDVKHLETAGADLVHIDVMDGHFVDNLTFGAGVVSALRSQTSLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + +++ A AG D ++ H E++ HI +L+ I G K V INP TPV
Sbjct: 64 DVHMMVENPEKYVDDFAKAGADSMSIHVEATNHIHGALQKIKNAGMKASVVINPGTPVEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ V+ +DM+L+MTVNPGFGGQ+ I + K+R+ + + + +EVDGG+ + I
Sbjct: 124 IKTVLPLVDMVLVMTVNPGFGGQKFIPEMMDKVRELTQIRTDKKLNFEIEVDGGIDDQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K AGA++ V GS FN + K + LK+
Sbjct: 184 KVAKAAGANVFVAGSFVFNGE----VEKNIEKLKE 214
>gi|319764710|ref|YP_004128647.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans BC]
gi|330826918|ref|YP_004390221.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans K601]
gi|317119271|gb|ADV01760.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans BC]
gi|329312290|gb|AEB86705.1| ribulose-phosphate 3-epimerase [Alicycliphilus denitrificans K601]
Length = 226
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 151/230 (65%), Gaps = 12/230 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V ++L+ +
Sbjct: 1 MSRTYRIAPSILSADFARLGEEVRSVIAAGADWIHFDVMDNHYVPNLTFGPMVCQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM+ +D+ A AG D+I+FHP++S H+ RS++ I A G K G
Sbjct: 61 AVTPGGQSVPIDVHLMVQPVDALAEAFAQAGADLISFHPDASAHVHRSIQAIKARGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP P+ +L+ VI++ID+IL+M+VNPGFGGQ I+ST+ KI A+ I + I L
Sbjct: 121 LTFNPAMPLDVLDWVIEDIDLILLMSVNPGFGGQGFIDSTLRKIEAARKRIEASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
EVDGG+ + NI+ + AGAD V GS+ F + Y ++ ++ +ALA
Sbjct: 181 EVDGGIKTDNIRRVADAGADTFVAGSAIFGKPD---YKAVIDAMR-AALA 226
>gi|313889774|ref|ZP_07823416.1| ribulose-phosphate 3-epimerase [Streptococcus pseudoporcinus SPIN
20026]
gi|313121819|gb|EFR44916.1| ribulose-phosphate 3-epimerase [Streptococcus pseudoporcinus SPIN
20026]
Length = 220
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 134/216 (62%), Gaps = 3/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSILAAD++ E+ I + A+ +H D+MDG FVPNISFGADV+ S+R +
Sbjct: 1 MTSH-KIAPSILAADYANFAAELKRIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+ + ++ A AG DI+T H ES+ HI +L+ I A G K GV INP
Sbjct: 60 SKLVFDCHLMVVDPERYVEAYAQAGADIMTIHLESTRHIHGALQKIKAAGMKAGVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV LE ++ +D +LIMTVNPGFGGQ I + K+++ + + + +EVDGGV
Sbjct: 120 TPVGALEPILSLVDQVLIMTVNPGFGGQAFIPECLDKVQKVVEMRQRAGLDFDIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I + +AGA++ V GS F +S + L
Sbjct: 180 DDKTIAACAKAGANVFVAGSYLFKADDLVSQVQTLR 215
>gi|323705498|ref|ZP_08117073.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535400|gb|EGB25176.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 217
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 130/219 (59%), Gaps = 5/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF L +I + + +H D+MDG FVPNI+ G V+ +L+ ++
Sbjct: 1 MEISPSILSADFGNLLSDIQKVETEKPEYLHIDIMDGHFVPNITIGPLVLNALKGKTEIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I DAG IT H E+ H+ R+L+ I +MG VA+NP T +
Sbjct: 61 FDVHLMIEEPDKYIKEFVDAGAKNITVHQEACVHLDRTLQLIKSMGINASVALNPATSLD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
L V+ +DM+LIMTVNPGFGGQ I KIR+ ++ +R + +EVDGG+ N
Sbjct: 121 TLRYVLSSVDMVLIMTVNPGFGGQVFINGMYEKIRELASIRNERGLNFKIEVDGGINIDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
IK +V AGAD++V GS F + L L+++AL
Sbjct: 181 IKDVVLAGADVIVAGSFIFANGDP---GENLKKLREAAL 216
>gi|257453991|ref|ZP_05619267.1| ribulose-phosphate 3-epimerase [Enhydrobacter aerosaccus SK60]
gi|257448656|gb|EEV23623.1| ribulose-phosphate 3-epimerase [Enhydrobacter aerosaccus SK60]
Length = 252
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 149/223 (66%), Gaps = 7/223 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++FG+ + ++LR Y
Sbjct: 28 QFLIAPSILSADFARLGEEVEKVIAAGADVVHFDVMDNHYVPNLTFGSMICQALRDYGVT 87
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+S +DS I AG IITFHPE++ H+ RSL+ I G G+ +NP TP
Sbjct: 88 APIDVHLMVSPVDSMIEQFLKAGASIITFHPEATQHVDRSLQLIKDGGADCGLVLNPATP 147
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ L+ V+D++D IL+M+VNPGFGGQ I+ T+ KI + +I R+I LEVDGG+ +
Sbjct: 148 LHHLDYVMDKVDQILLMSVNPGFGGQAFIDGTLKKIEAVREMIRLSGRNIRLEVDGGIKA 207
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI+++ +AGAD+ V GS+ FNQ Y + ++ ++ + LA+
Sbjct: 208 SNIRAVAEAGADMFVAGSAIFNQPD---YRQAIDAMR-AELAL 246
>gi|317495107|ref|ZP_07953477.1| ribulose-phosphate 3-epimerase [Gemella moribillum M424]
gi|316914529|gb|EFV36005.1| ribulose-phosphate 3-epimerase [Gemella moribillum M424]
Length = 214
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 132/210 (62%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSIL+ADF+ L ++ + + G H DVMDG FVPNISFG +I ++RS +D +F
Sbjct: 3 KILPSILSADFANLERDVRELEQIGIDMFHIDVMDGNFVPNISFGFPIIEAIRSKTDKIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI+ + ++ +AGCD+++FH E++ H R ++ I GKK G+ +NP+TP+
Sbjct: 63 DCHLMIARPEEYVERFCNAGCDMVSFHIEATNHADRVIQIIKNSGKKAGMVLNPQTPIES 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ ++D +LIMTVNPGFGGQ+ I + KI + + ++ S ++VDGGV
Sbjct: 123 VKYLLPKLDYVLIMTVNPGFGGQKFIPEMLEKIEELAKIREEKGYSFLIQVDGGVNVETS 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K GADLLV GS F + + L
Sbjct: 183 KLCRDKGADLLVCGSFLFGAEDKEKTLGEL 212
>gi|167768982|ref|ZP_02441035.1| hypothetical protein ANACOL_00303 [Anaerotruncus colihominis DSM
17241]
gi|167668622|gb|EDS12752.1| hypothetical protein ANACOL_00303 [Anaerotruncus colihominis DSM
17241]
Length = 221
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 135/218 (61%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILA DF+ LG E++ + AGA IH DVMDG FVPNIS G V+ SLR +D+V
Sbjct: 4 MKIAPSILACDFAALGAEVAAMHNAGADLIHVDVMDGHFVPNISLGLPVVASLRKATDAV 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMIS ++ D G DI+ FH ES + + I A GKK G++I P+TP
Sbjct: 64 LDVHLMISDPLTYAPQFCDKGADIVVFHAESDSEPQAVIDAIRAKGKKCGISIKPKTPAD 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ +D++DM+L+MTV PGFGGQ+ +E PKI + +R + +EVDGG+ +
Sbjct: 124 VVFPYLDQLDMVLVMTVEPGFGGQKFMEDMCPKIEAVRRECDRRGLSTDIEVDGGIDLKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I V+AGA++ V GS+ F + YA + DL+ +A
Sbjct: 184 IGKTVRAGANVFVAGSALFGKPD---YAAAVRDLRAAA 218
>gi|326560286|gb|EGE10674.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 7169]
gi|326563631|gb|EGE13883.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 103P14B1]
gi|326565292|gb|EGE15477.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis 12P80B1]
gi|326566396|gb|EGE16546.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis BC1]
gi|326570942|gb|EGE20966.1| ribulose-phosphate 3-epimerase [Moraxella catarrhalis BC7]
Length = 226
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 142/218 (65%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSIL+ADF+RLG +I ++ +AGA +HFDVMD +VPN++FG+ + ++L+ Y
Sbjct: 1 MTQPFLIAPSILSADFARLGADIESVLEAGADVVHFDVMDNHYVPNLTFGSMICQALKDY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I G DIITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 61 GITAPIDVHLMVKPVDGMIEQFLKVGADIITFHPEASEHIDRSLQLIKDGGAKCGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ +D++D IL+M+VNPGFGGQ+ I++T+ K+ + +I R I LEVDGG
Sbjct: 121 ATPLYYLDHTLDKVDQILLMSVNPGFGGQKFIDATLDKLATVRQMIDDSGRDIRLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+++ +AGAD+ V GS+ FNQ + + D
Sbjct: 181 VNVANIRTIGEAGADMFVAGSAIFNQPNYKAVIDAMRD 218
>gi|297559834|ref|YP_003678808.1| ribulose-phosphate 3-epimerase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844282|gb|ADH66302.1| ribulose-phosphate 3-epimerase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 223
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 88/221 (39%), Positives = 136/221 (61%), Gaps = 3/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF+ L +E + ++ + A +H DVMD FVPN++ G ++ SL +D+
Sbjct: 2 AIQISPSILSADFAHLADEAAAVSPS-ADWLHVDVMDNHFVPNLTLGLPIVESLLKATDT 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H +++ R+LR I +G + G+A+NP PV
Sbjct: 61 PLDCHLMIEEPDRWAPAYAEAGAGSVTIHAKAAGAPVRTLREIRRLGARAGLALNPAEPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
D++ E+DM+L+MTV PGFGGQ+ ++ +PKIR+A+ ++ R S+ L+VDGGV+
Sbjct: 121 EPYADLVGEMDMLLLMTVEPGFGGQKFLDVVLPKIRRAREILDSREASVWLQVDGGVSDE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + + + L L A A
Sbjct: 181 TIERAAEAGADVFVAGSAVYGAQDPAKAVESLRALATGAAA 221
>gi|320539807|ref|ZP_08039466.1| D-ribulose-5-phosphate 3-epimerase [Serratia symbiotica str.
Tucson]
gi|320029993|gb|EFW12013.1| D-ribulose-5-phosphate 3-epimerase [Serratia symbiotica str.
Tucson]
Length = 225
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 101/219 (46%), Positives = 138/219 (63%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ +N+ AG +HFDVMD +VPN++ G V +LR+Y
Sbjct: 1 MKKFLIAPSILSADFARLGEDTANMLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D + A AG ITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 61 ISAPIDVHLMVKPVDRIVPDFAKAGATYITFHPEASEHIARTLQLIQEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ L+ V+D+ID+ILIM+VNPGFGGQ I + K+RQ + LI R I LEVDGGV
Sbjct: 121 TPLSYLDYVMDKIDVILIMSVNPGFGGQSFIHGPLGKLRQVRKLIDASGRDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + AGAD+ V GS+ F + Y K ++D++
Sbjct: 181 KVDNIAEIAAAGADMFVAGSAIFGKPD---YRKVIDDMR 216
>gi|302879897|ref|YP_003848461.1| ribulose-phosphate 3-epimerase [Gallionella capsiferriformans ES-2]
gi|302582686|gb|ADL56697.1| ribulose-phosphate 3-epimerase [Gallionella capsiferriformans ES-2]
Length = 226
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 92/224 (41%), Positives = 137/224 (61%), Gaps = 6/224 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
QI PSIL+A+F++LGEE+ N+ AGA +HFDVMD +VPN++ G V +LR++ +
Sbjct: 3 QIAPSILSANFAKLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPLVCDALRAHGVTAP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +D I A AG ITFHPE+S H+ R++ I G K G+ NP TP+
Sbjct: 63 IDVHLMVKPVDRIIPDFAKAGATFITFHPEASEHVDRTIGLIKESGCKAGLVFNPATPLD 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
ILE ++ ++DM+L+M+VNPGFGGQ+ I T+ K R+ +A+I + LE+DGGV N
Sbjct: 123 ILEYMLPKLDMVLLMSVNPGFGGQKFIPYTLDKARKVRAMIDAGGYNCLLEIDGGVGPAN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLKKSALAI 223
I+ + AG D V GS+ FN + + + ++ +
Sbjct: 183 IREVAAAGVDTFVAGSAIFNARNAADKNQFDTVIAAMRAELAKV 226
>gi|332994696|gb|AEF04751.1| ribulose-phosphate 3-epimerase [Alteromonas sp. SN2]
Length = 225
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 143/220 (65%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++FG + +LR Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEEVENVLSAGADVVHFDVMDNHYVPNLTFGPMICEALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I ADAG I+FHPE+S HI RSL+ I G K G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDDLIEKFADAGASYISFHPEASEHIDRSLQLIIDAGCKPGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D++ ILIM+VNPGFGGQ+ I ST+ K+R K + + I +E+DGG
Sbjct: 120 ATPLHYLDHVMDKLHHILIMSVNPGFGGQKFIPSTLDKVRAVKQRVLESGHDIRIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI+++ +AGAD+ V GS+ F++ Y ++D++
Sbjct: 180 VKVDNIRAIAEAGADMFVAGSAIFSEPD---YRAVIDDMR 216
>gi|307109731|gb|EFN57968.1| ribulose-phosphate 3-epimerase mature form [Chlorella variabilis]
Length = 230
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 141/223 (63%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + PSIL+A+F++LGE+++ I KAG IH DVMDG FVPNI+ GA V+ +LR +
Sbjct: 4 KSDVIVSPSILSANFAKLGEQVAAIDKAGCDWIHVDVMDGRFVPNITIGALVVDALRPVT 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D DCHLMI + + A AG DII+ H E S+ H+ R + I +G K GV +NP
Sbjct: 64 DKPLDCHLMIVEPELRVADFAKAGADIISVHAEQSSTIHLHRVVNQIKELGCKAGVVLNP 123
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP+ +E V+ +D++LIM+VNPGFGGQ+ I+S I KI + KA+ ++ + +EVDGG
Sbjct: 124 GTPLEQIEYVLPIVDLVLIMSVNPGFGGQKFIDSQIDKIAKLKAMCLEKGCNPWIEVDGG 183
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
VT N +++AGA+ +V GS F K + + + K+ A
Sbjct: 184 VTPDNAYLVIEAGANAIVSGSGVFGAKDYAAAIQGIKTSKRPA 226
>gi|262384556|ref|ZP_06077690.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_33B]
gi|262293849|gb|EEY81783.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_33B]
Length = 216
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+ D
Sbjct: 5 IAPSLLSANFLDLRKEVEMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD+LV G+ F I K L L
Sbjct: 185 RLVDAGADVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|171060426|ref|YP_001792775.1| ribulose-phosphate 3-epimerase [Leptothrix cholodnii SP-6]
gi|170777871|gb|ACB36010.1| Ribulose-phosphate 3-epimerase [Leptothrix cholodnii SP-6]
Length = 225
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 142/220 (64%), Gaps = 11/220 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++L+ +S
Sbjct: 4 RIAPSILSADFARLGEEVRNVLAAGADWIHFDVMDNHYVPNLTFGPMVCQALKKHSVKPD 63
Query: 65 -----FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +D A AG D+I+FHPE+S H+ R+L+ I G + G+A NP
Sbjct: 64 GRACPIDVHLMVQPVDELALAFAKAGADLISFHPEASAHVDRTLQLIKGAGCQAGLAFNP 123
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
+ + +LE VID +D+ILIM+VNPGFGGQ I+S + KI +A+ LI R I LEVDGG
Sbjct: 124 ASSLDVLEYVIDRVDLILIMSVNPGFGGQSFIDSALRKIERARRLIEATGRDIRLEVDGG 183
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI+ + AGAD V GS+ F+Q Y ++ ++
Sbjct: 184 VKVDNIRRIADAGADTFVAGSAIFSQ---AEYRGVIDAMR 220
>gi|307710850|ref|ZP_07647277.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK321]
gi|307617295|gb|EFN96468.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK321]
Length = 218
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHAEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|307702976|ref|ZP_07639923.1| ribulose-phosphate 3-epimerase [Streptococcus oralis ATCC 35037]
gi|307623369|gb|EFO02359.1| ribulose-phosphate 3-epimerase [Streptococcus oralis ATCC 35037]
Length = 218
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLSFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|330813358|ref|YP_004357597.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486453|gb|AEA80858.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 218
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 90/220 (40%), Positives = 138/220 (62%), Gaps = 4/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I+I PSIL++DF +L EI I AGA IH DVMDG FVPNI+ GA V+++LR ++
Sbjct: 1 MKKIKISPSILSSDFGQLSTEIKKIEDAGADMIHVDVMDGHFVPNITIGAPVVKALRKHT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLMI+ + ++ A AG DIIT HPE++ ++ +++ I ++GKK GV+INPET
Sbjct: 61 SLPFDVHLMIAPVHKYVKDFAAAGADIITVHPEATDNLLQTIELIKSLGKKAGVSINPET 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P+ + V+ ID+ LIM+VNPGFGGQ+ I + K++ + I + ++ +E+DGG+
Sbjct: 121 PLDSIFPVLHLIDLALIMSVNPGFGGQKFIPEVLSKVKILREKIDEENLEVEIEIDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
K +AG D+LV G++ F + + + L+
Sbjct: 181 FETGKLAKEAGVDILVSGTTLFAGNDGL--KENIKKLRNC 218
>gi|206890008|ref|YP_002248171.1| ribulose-phosphate 3-epimerase [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741946|gb|ACI21003.1| ribulose-phosphate 3-epimerase [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 219
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 102/214 (47%), Positives = 143/214 (66%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF RL EE+ + +AGA IH DVMDGCFVPNI+ G ++ +++ + D
Sbjct: 4 IAPSILSADFGRLAEEVKHAEQAGADMIHIDVMDGCFVPNITIGPLIVEAVKKATMLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I AG DI+T H E+ PH+ R++ I G + GV++NP T ++ +
Sbjct: 64 VHLMIIQPEKYIEDFVKAGADILTVHVEACPHLHRTVWQIKESGIRVGVSLNPATSLSSI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E++I +ID+ILIM+VNPGFGGQ+ I ST+ KI +AK +I + +EVDGGV N K
Sbjct: 124 EEIIHDIDLILIMSVNPGFGGQKFIPSTLDKINRAKKMILSNKLQTVIEVDGGVKLENAK 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+VQAGAD+LV+GS+FF QK Y K + L+K
Sbjct: 184 KIVQAGADILVMGSAFFKQKD---YKKFMKQLRK 214
>gi|307707666|ref|ZP_07644146.1| ribulose-phosphate 3-epimerase [Streptococcus mitis NCTC 12261]
gi|307616278|gb|EFN95471.1| ribulose-phosphate 3-epimerase [Streptococcus mitis NCTC 12261]
Length = 218
Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|123398284|ref|XP_001301245.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121882402|gb|EAX88315.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 225
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ I PSIL+ADF+ L ++ +T AGA IH DVMD FVPN++ GA V+ SLR ++ S
Sbjct: 2 QVHIAPSILSADFATLAQDCKVVTDAGADWIHVDVMDNHFVPNLTIGAPVVASLRKHTTS 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + +I +A AG D TFH E++ + IHA K G+++ P+TP+
Sbjct: 62 FLDVHLMVEYPEQYIEPMAKAGADQFTFHIEATKDASALIDAIHAKKMKAGISVKPKTPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +D++DMIL+MTV PGFGGQ + +PK+ + + + +EVDGG++ + I
Sbjct: 122 ESIYPYLDKVDMILVMTVEPGFGGQSFMADMMPKVSALRKKCPQ--LDIEVDGGLSPKTI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ AGA+ +V GS+ F K K+L +
Sbjct: 180 ETAAAAGANCIVAGSAVFGAKDIPLVIKQLRE 211
>gi|168188132|ref|ZP_02622767.1| ribulose-phosphate 3-epimerase [Clostridium botulinum C str.
Eklund]
gi|169294034|gb|EDS76167.1| ribulose-phosphate 3-epimerase [Clostridium botulinum C str.
Eklund]
Length = 216
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADFS LGE+I I K GA IH DVMDG FVPNISFG +I+S+R+ +
Sbjct: 2 VNLAPSILSADFSNLGEDIKKIDKYGADIIHIDVMDGMFVPNISFGIPIIKSIRNITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A +G DIIT H E+ H+ R++ I + G K G+A+NP TPV
Sbjct: 62 FDVHLMIEDPARYIENFAKSGADIITVHYEADRHLDRTINYIKSFGVKAGIALNPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+ +I +DM+LIM+VNPGFGGQ+ IE KIR+ K L + + + +EVDGGV + N
Sbjct: 122 SIRHLIGIVDMVLIMSVNPGFGGQKYIEYCSDKIRKVKELAKELNKDLLIEVDGGVGANN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK +V+ GA+++V GS+ F K + +
Sbjct: 182 IKKVVECGANVIVAGSAVFKNGEIEKNIKEIKE 214
>gi|46446402|ref|YP_007767.1| ribulose-phosphate 3-epimerase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46400043|emb|CAF23492.1| putative ribulose-phosphate 3-epimerase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 243
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 83/237 (35%), Positives = 134/237 (56%), Gaps = 23/237 (9%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSILA DF L +E +AGA +H D+MDG FVPN++ G+ + ++ ++
Sbjct: 7 AVKIAPSILAGDFGHLADEAKKAEQAGADSLHLDIMDGHFVPNLTMGSQAVSAINRATNL 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I AG D ITFH E++ + +L I + G+A NPET V
Sbjct: 67 FLDVHLMIYNPFDYIERFVQAGADSITFHMEATEDVEETLAYIRKCNIRAGLAFNPETSV 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI------------- 170
+++ +D+ DMIL+MTVNPGFGGQ+ IE + K++ + L + +I
Sbjct: 127 SMIPKYLDKCDMILLMTVNPGFGGQKFIEKVLDKVQFTRDLCNQLNIRAGGVTLKDNSST 186
Query: 171 -------SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++VDGG+T N++ V+AGA+++V G+S F +A + +++SA
Sbjct: 187 GHQLPPFDIQVDGGITHLNVRRCVEAGANVIVAGTSLFKSPN---FADAIKQMRQSA 240
>gi|53720657|ref|YP_109643.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei K96243]
gi|76810355|ref|YP_334938.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1710b]
gi|52211071|emb|CAH37059.1| putative ribulose-phosphate 3-epimerase [Burkholderia pseudomallei
K96243]
gi|76579808|gb|ABA49283.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1710b]
Length = 243
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 141/229 (61%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 16 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 74
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 75 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPA 134
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LE+
Sbjct: 135 TPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEI 194
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV + NI + AGAD V GS+ F + Y + + +++ + +
Sbjct: 195 DGGVKAENIAEIAAAGADTFVAGSAIFGKPD---YRQVIGEMRDALATV 240
>gi|119474848|ref|ZP_01615201.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2143]
gi|119451051|gb|EAW32284.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2143]
Length = 225
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 99/214 (46%), Positives = 140/214 (65%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ + AGA IHFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEEVDAVLNAGADIIHFDVMDNHYVPNLTIGPMVCKALRDYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D+ I ADAG ITFHP+++ H+ RSL I G K G+ +NP V
Sbjct: 66 DVHLMVSPVDALIADFADAGASYITFHPDATTHLDRSLAMIRDAGCKAGLVLNPAMGVES 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I T+ K+R+ + LI + EVDGGVT+ NI
Sbjct: 126 LKYVMDKLDMILLMSVNPGFGGQAFIPGTLDKLREVRQLIDASGFDIRLEVDGGVTADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + +AGAD V GS+ +N+ Y + +N ++
Sbjct: 186 RDIAEAGADTFVAGSAIYNKPD---YKEAINAMR 216
>gi|296110618|ref|YP_003620999.1| ribulose-phosphate 3-epimerase [Leuconostoc kimchii IMSNU 11154]
gi|295832149|gb|ADG40030.1| ribulose-phosphate 3-epimerase [Leuconostoc kimchii IMSNU 11154]
Length = 218
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 89/215 (41%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+AD++ L ++ + +AGA+ +H DVMDG FVP+IS+G + ++ LR +D +
Sbjct: 4 IIAPSILSADYTNLERDVKLVEEAGAEYLHIDVMDGSFVPSISYGPNWVKQLRPETDMIL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + + ++ +DAG DII H E++ HI R L+ I G K V INP TPV
Sbjct: 64 DVHLMVVNPEKIVDEFSDAGADIIGVHVEATSHIHRVLQMIKNKGVKAEVVINPGTPVLA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+E V+D +D +L+MTVNPGFGGQ+ + STI K+ Q KA+ + + +E+DGGV + I
Sbjct: 124 IESVLDMVDQVLVMTVNPGFGGQKFLPSTIEKVAQLKAIRDELGYTFDIEIDGGVNNETI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA++ V GS +++ + L +L K
Sbjct: 184 GAAYEAGANVFVAGSYVYDKVDPAAKINLLKELTK 218
>gi|126663243|ref|ZP_01734241.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Flavobacteria bacterium BAL38]
gi|126624901|gb|EAZ95591.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Flavobacteria bacterium BAL38]
Length = 219
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+LAADF+ L +I I + A H D+MDG FVPNISFG V+ ++ +
Sbjct: 1 MKNTF-IAPSVLAADFANLQRDIEMINASDADWFHIDIMDGVFVPNISFGMPVLDAINKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D +I G D++T H E+ H+ R+L+ I A G K GVA+NP
Sbjct: 60 AKKTIDVHLMIVDPDRYIATFKKLGADVLTVHYEACTHLHRTLQAIKAEGMKAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T V +LEDVI +ID++ IM+VNPGFGGQ IE+T K+++ KALI +++ S +E+DGGV
Sbjct: 120 TNVDLLEDVIQDIDLVCIMSVNPGFGGQSFIENTYDKVKKLKALIERKNASTLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
T++N K L AGAD+LV GS F + + L + K
Sbjct: 180 TNKNAKQLADAGADVLVAGSYVFGAENPTATITDLKVITK 219
>gi|297184128|gb|ADI20247.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 217
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+LAADF L + + K+ A H DVMDG FVPNIS+G V++++
Sbjct: 1 MAAPI-ISPSLLAADFGNLQRDCQMVNKSQADWFHIDVMDGVFVPNISYGMPVVKTMAEN 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ V D HLMI + +I D G DI+T H E+ H+ R+++ IH G K GVA+NP
Sbjct: 60 CEKVMDVHLMIVQPERYIQTFKDCGADILTVHAEACTHLHRTIQEIHNAGMKAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++LED+I ++D +L+M+VNPGFGGQ+ IE+TI K QA+ LI + + +E+DGGV
Sbjct: 120 TPVSVLEDIIQDLDEVLLMSVNPGFGGQKFIENTIKKTAQARELIDRTASKALIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD LV GS F I+ L L
Sbjct: 180 NLETGARLLAAGADALVAGSFVFKSDDPIATIAALKAL 217
>gi|260887291|ref|ZP_05898554.1| ribulose-phosphate 3-epimerase [Selenomonas sputigena ATCC 35185]
gi|330838955|ref|YP_004413535.1| ribulose-phosphate 3-epimerase [Selenomonas sputigena ATCC 35185]
gi|260862927|gb|EEX77427.1| ribulose-phosphate 3-epimerase [Selenomonas sputigena ATCC 35185]
gi|329746719|gb|AEC00076.1| ribulose-phosphate 3-epimerase [Selenomonas sputigena ATCC 35185]
Length = 214
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQ+ PSIL+ADF+ L +E+ I AGA+ +H DVMDG FVPNI+ GA V++SLR S +V
Sbjct: 2 IQVAPSILSADFAHLADEVQRIETAGAEYVHIDVMDGAFVPNITLGAPVVKSLRKCSAAV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ ++ I A+AG D+ITFH E+ H R ++ I ++G + GVA+NP TP+
Sbjct: 62 FDVHLMVERPEAQIASFAEAGADVITFHIEAVRHAHRLVQEIKSLGCRAGVALNPATPLV 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+LE+++ +IDM LIMTVNPGFGGQ+ I S + KI + + + +EVDGG+ +
Sbjct: 122 MLEELMADIDMALIMTVNPGFGGQKFIPSMLEKIALLRHTAEENDFALDIEVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGA++LV GS+ + + +
Sbjct: 182 APLVREAGANILVAGSAVYGASDIEKAIQAIR 213
>gi|307705632|ref|ZP_07642483.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK597]
gi|307620808|gb|EFN99893.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK597]
Length = 218
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLKFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|78357674|ref|YP_389123.1| ribulose-5-phosphate 3-epimerase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220079|gb|ABB39428.1| ribulose-5-phosphate 3-epimerase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 217
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 144/218 (66%), Gaps = 5/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L++D+ RL +E++ + AG +H+DVMDG FVPNI+ GA +I+ LR S
Sbjct: 1 MILSPSLLSSDYGRLADELAALEDAGLSWVHWDVMDGMFVPNITLGAPIIKKLRKASGLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + + +I ADAG D++ H E++ H+ R+L I MG + GVA+NP TP+
Sbjct: 61 FDVHLMVQAPERYIADFADAGADMLVVHAEATNHLERTLSEIRRMGVQCGVALNPHTPLC 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+LE V+D++DM+LIM+VNPGFGGQ+ I T+ KI + A+I R + ++VDGGV N
Sbjct: 121 VLEYVLDQLDMVLIMSVNPGFGGQKFIPFTMRKIEELSAMITARGLKTLIQVDGGVDPEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
LV+ GAD+LV GS+FF Y +R + + +A
Sbjct: 181 TPELVRRGADVLVSGSAFFGHP---PYRQRHDAFQAAA 215
>gi|305681310|ref|ZP_07404117.1| ribulose-phosphate 3-epimerase [Corynebacterium matruchotii ATCC
14266]
gi|305659515|gb|EFM49015.1| ribulose-phosphate 3-epimerase [Corynebacterium matruchotii ATCC
14266]
Length = 218
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 83/219 (37%), Positives = 121/219 (55%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+ LG +I + A A IH D+MDG FVPN+SFGAD+ + R
Sbjct: 1 MTTPI-ISPSILSADFTNLGADIQAV--ANADWIHVDIMDGHFVPNLSFGADITAAARRA 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + ++ AG D I FH E++ R I A G + G ++ P
Sbjct: 58 TTQPLDVHLMIDNPERWVDNYIKAGADHIIFHVEATDDPVSLARHIRAAGVQAGFSLRPG 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ +DE D++LIM+V PGFGGQ+ + + K+R + I R ++ +E+DGG+
Sbjct: 118 TPIEPYLPTLDEFDLVLIMSVEPGFGGQKFMPDQLDKVRALRHEITTRGLATLIEIDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ I +AG D V GS+ F + L L
Sbjct: 178 SADTIAQAAEAGCDAFVAGSAIFTNDDPAAAVTNLRTLA 216
>gi|228477034|ref|ZP_04061672.1| ribulose-phosphate 3-epimerase [Streptococcus salivarius SK126]
gi|312863242|ref|ZP_07723480.1| ribulose-phosphate 3-epimerase [Streptococcus vestibularis F0396]
gi|322515992|ref|ZP_08068930.1| ribulose-phosphate 3-epimerase [Streptococcus vestibularis ATCC
49124]
gi|228251053|gb|EEK10224.1| ribulose-phosphate 3-epimerase [Streptococcus salivarius SK126]
gi|311100778|gb|EFQ58983.1| ribulose-phosphate 3-epimerase [Streptococcus vestibularis F0396]
gi|322125527|gb|EFX96868.1| ribulose-phosphate 3-epimerase [Streptococcus vestibularis ATCC
49124]
Length = 219
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ I +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 2 SYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + +++ A AG DI+T H E++ HI +L+ I A G K GV INP TPV
Sbjct: 62 VFDCHLMVVDPERYVDAYAQAGADIMTIHVEATKHIHGALQKIKAAGMKAGVVINPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L V+D +D +LIMTVNPGFGGQ I + K+ + L K S +EVDGGV +
Sbjct: 122 EALIPVLDLVDQVLIMTVNPGFGGQAFIPEMMSKVERVVELREKGGYSFDIEVDGGVDNN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 182 TIAACAKAGANVFVAGSYLFKNPDLTAQVQTLRD 215
>gi|254281536|ref|ZP_04956504.1| ribulose-phosphate 3-epimerase [gamma proteobacterium NOR51-B]
gi|219677739|gb|EED34088.1| ribulose-phosphate 3-epimerase [gamma proteobacterium NOR51-B]
Length = 224
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 102/225 (45%), Positives = 147/225 (65%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
QI PSIL+ADF+RLGEE+ ++ AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRDYQIAPSILSADFARLGEEVDSVLAAGADIVHFDVMDNHYVPNLTIGPMVCQALRDYG 60
Query: 62 DS-VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+S +D+ I +AG ITFHP++S H+ RSL+ I G K+G+ NP
Sbjct: 61 VAAPIDVHLMVSPVDALIGSFVEAGASYITFHPDASTHVDRSLQLIRDAGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ +L VID++DMIL+M+VNPGFGGQ+ I +T+ K+R+A+ LI + + EVDGGV
Sbjct: 121 TPLDVLRYVIDKVDMILLMSVNPGFGGQKFIPATLDKLREARGLIDNSGLPIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ NI + AGAD V GS+ FNQ Y + + D++ ++
Sbjct: 181 NTANIAVIAAAGADTFVAGSAIFNQPD---YRQVIADMRAELESV 222
>gi|158522240|ref|YP_001530110.1| ribulose-phosphate 3-epimerase [Desulfococcus oleovorans Hxd3]
gi|158511066|gb|ABW68033.1| Ribulose-phosphate 3-epimerase [Desulfococcus oleovorans Hxd3]
Length = 219
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 89/216 (41%), Positives = 139/216 (64%), Gaps = 2/216 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLG+E+ + AGA IH DVMDG +VPNI+ G V++++RS + D
Sbjct: 4 IAPSILSADFARLGDEVMAVEAAGADWIHVDVMDGRYVPNITIGPLVVKAVRSVTSLPVD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ AG D++ H E+S H+ R+++ I +G + GVA+NP TP+++L
Sbjct: 64 AHLMIMEPERYVAEFVQAGADLVAVHAEASVHLNRTIQLIKGLGARAGVALNPSTPLSVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
+ V+D++D+++IM+VNPGFGGQQ I +++ K+R K I +R + ++VDGGV + I+
Sbjct: 124 DWVLDDLDLVVIMSVNPGFGGQQFIPNSLDKVRALKQRITERGLATQIQVDGGVNEKTIR 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AG D+ V GS+ F + L L A
Sbjct: 184 DVSAAGTDVFVAGSAVFGSSNYKTTIATLRKLANEA 219
>gi|319779008|ref|YP_004129921.1| Ribulose-phosphate 3-epimerase [Taylorella equigenitalis MCE9]
gi|317109032|gb|ADU91778.1| Ribulose-phosphate 3-epimerase [Taylorella equigenitalis MCE9]
Length = 241
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 135/218 (61%), Gaps = 7/218 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS- 63
I+I PSIL+ADF+RLGEEI ++ +AGA IHFDVMD FVPN++ G V +++ Y+ +
Sbjct: 14 IRIAPSILSADFARLGEEIEDVIQAGADWIHFDVMDNHFVPNLTIGPMVCEAIKPYAKTT 73
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG D+ITFHPE+S HI R+L I G G+ NP TP+
Sbjct: 74 PIDVHLMVEPVDALIPMFAKAGADVITFHPEASHHIDRTLSLIRDHGCSAGLVFNPATPL 133
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
+ V+D++D++L+M+VNPGFGGQ + S + K+ +A I R I LEVDGG
Sbjct: 134 EYMNYVMDKLDVVLLMSVNPGFGGQSFLPSALKKLSDTRARIDAYREKTGRGIFLEVDGG 193
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI + AGAD V GS+ F +++
Sbjct: 194 VKVENIAQIHAAGADTFVAGSAIFGASDYRQVIAEMHN 231
>gi|254519235|ref|ZP_05131291.1| ribulose-phosphate 3-epimerase [Clostridium sp. 7_2_43FAA]
gi|226912984|gb|EEH98185.1| ribulose-phosphate 3-epimerase [Clostridium sp. 7_2_43FAA]
Length = 215
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGEEI N+ KAGA IH DVMDG FVPNIS G VI+S+R+ + +
Sbjct: 2 VKISPSILSADFSKLGEEIINVDKAGADFIHIDVMDGNFVPNISIGLPVIKSIRNKTSKI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I+ +AG DIIT H E+ HI R++ I + G + GV++NP TP
Sbjct: 62 FDVHLMIENPSRYIDDFVNAGADIITIHYEAEKHIDRAIEYIKSKGIRAGVSLNPGTPTF 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRN 182
+L+++I+++D++LIM+VNPGFGGQ+ I + KI++ K + + + +EVDGGV N
Sbjct: 122 VLKNIINKLDLVLIMSVNPGFGGQKFIPYALDKIKEVKEMSLDSNKDLLIEVDGGVDKTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K++++AGA++LV GS+ F + +
Sbjct: 182 AKAIIEAGANVLVAGSAVFGDGNLKENIEAIR 213
>gi|239939910|ref|ZP_04691847.1| ribulose-phosphate 3-epimerase [Streptomyces roseosporus NRRL
15998]
gi|239986396|ref|ZP_04707060.1| ribulose-phosphate 3-epimerase [Streptomyces roseosporus NRRL
11379]
gi|291443342|ref|ZP_06582732.1| ribulose-phosphate 3-epimerase [Streptomyces roseosporus NRRL
15998]
gi|291346289|gb|EFE73193.1| ribulose-phosphate 3-epimerase [Streptomyces roseosporus NRRL
15998]
Length = 227
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G ++ +L +D+
Sbjct: 3 QINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPIVEALSKATDTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEDADRWAPQYVEAGAGSVTFHAEAAAAPVRLAREIRAKGARASMALKPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++ I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSATTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGAD+ V GS+ + + + L
Sbjct: 181 ERCAEAGADVFVAGSAVYGAADPAAAVRDLR 211
>gi|325286935|ref|YP_004262725.1| ribulose-phosphate 3-epimerase [Cellulophaga lytica DSM 7489]
gi|324322389|gb|ADY29854.1| ribulose-phosphate 3-epimerase [Cellulophaga lytica DSM 7489]
Length = 219
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LAADF L ++ + + A H D+MDG FVPNIS+G V++S+ ++
Sbjct: 5 KIAPSLLAADFGNLQRDVEMVNNSEADWHHIDIMDGVFVPNISYGMPVLKSIAQHATKTL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D +I A+ G ++++ H E+ H+ R+L+ I A G GVA+NP T V +
Sbjct: 65 DVHLMIVDPDRYIKTFAELGANVLSVHYEACTHLHRTLQAIKAEGMMAGVALNPHTNVNL 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED+I++ID++ +M+VNPGFGGQ IE+T K++ K LI K + + +E+DGGVTS+N
Sbjct: 125 LEDIINDIDVVCLMSVNPGFGGQSFIENTYNKVKALKELITKNNATTLIEIDGGVTSKNA 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K+LV AGAD+LV GS F K L ++
Sbjct: 185 KALVDAGADVLVAGSFVFKSDNPTDTIKNLKEI 217
>gi|269469078|gb|EEZ80633.1| pentose-5-phosphate-3-epimerase [uncultured SUP05 cluster
bacterium]
Length = 223
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 4/223 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF+RLGEE+ N+ + GA +HFDVMD +V N++ G V +LR++
Sbjct: 1 MKQANFIAPSILSADFARLGEEVDNVLRDGADIVHFDVMDNHYVNNLTIGPLVCEALRNH 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG ITFHPE+S HI ++ I G K G+ NP
Sbjct: 61 GVTAPIDAHLMVKPVDRIIPDFASAGATYITFHPEASEHIDGTIGLIKDNGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
T + LE VID++DMIL+M+VNPGFGGQ I S++ K+R + +I + + + E+DGG
Sbjct: 121 ATSLNYLEHVIDKLDMILLMSVNPGFGGQSFIPSSLDKLRTVRKMIDDKGLDIRLEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
V NI+ + AGAD V GS+ FN + + + +L K+
Sbjct: 181 VKIDNIREIAAAGADTFVAGSAIFNTEDYKATIDAMRAELAKA 223
>gi|160883234|ref|ZP_02064237.1| hypothetical protein BACOVA_01203 [Bacteroides ovatus ATCC 8483]
gi|156111459|gb|EDO13204.1| hypothetical protein BACOVA_01203 [Bacteroides ovatus ATCC 8483]
Length = 216
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 134/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + I + G + H E+ PH+ R ++ I G + V INP
Sbjct: 59 SQKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + ++L++L
Sbjct: 179 NLETGARLVEAGADALVAGNAVFAAPDPEAMIRQLHEL 216
>gi|312134893|ref|YP_004002231.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor owensensis OL]
gi|311774944|gb|ADQ04431.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor owensensis OL]
Length = 221
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DF+ L E+ + AGA +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 2 PIKIAPSILSSDFADLKSELKKLEVAGADLVHIDVMDGNFVDNITIGAPVVSSLRKNSKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TP+
Sbjct: 62 FFDVHLMVIHPEKHIERFVQSGADNITVHAEATYHLDALISRIKSFGKKASVALNPATPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++E+V++ +DM+LIMTVNPG+GGQ+LI T+ KI + K + +EVDGG+
Sbjct: 122 YMIENVLEIVDMVLIMTVNPGYGGQKLIPYTLKKIERLANFREKEGLTFEIEVDGGINED 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I V+AGAD++V GS F+ ++L
Sbjct: 182 TIVDCVKAGADVIVAGSYVFDSGDVSKAVEKLKS 215
>gi|256830162|ref|YP_003158890.1| ribulose-phosphate 3-epimerase [Desulfomicrobium baculatum DSM
4028]
gi|256579338|gb|ACU90474.1| ribulose-phosphate 3-epimerase [Desulfomicrobium baculatum DSM
4028]
Length = 221
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 131/220 (59%), Gaps = 2/220 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS+L++DF L E++ + AG K +H+DVMDG FVPNI+FG +I LR S
Sbjct: 1 MREFILSPSLLSSDFGNLRAELTALEDAGLKWVHWDVMDGAFVPNITFGPPIIGRLRKTS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLMI + +I ADAG D++ H ES+ H+ R++ I G KTG+A+NP T
Sbjct: 61 KLFFDVHLMIERPERYIREFADAGADLLCIHAESTLHLERTISAIREAGMKTGLALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+AI++ ++ +DM+LIM+VNPGFGGQ I KI +I R + ++VDGGVT
Sbjct: 121 PLAIVDYLLPSLDMVLIMSVNPGFGGQSFIPFCKDKIAALSGMIRARGLETLIQVDGGVT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N K L GAD+LV GS+FF K D ++
Sbjct: 181 LDNAKELFDLGADVLVSGSAFFGFPPYAERHKAFQDAMRA 220
>gi|330722059|gb|EGG99978.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC2047]
Length = 230
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 100/200 (50%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSILAA+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILAANFARLGEEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCKALRQHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D I A+AG ITFHPE+S HI RSL I + G K G+ NP TP++
Sbjct: 66 DAHLMVSPVDRMIGEFAEAGATYITFHPEASDHIDRSLELIKSAGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ+ I ST+ KI + I R I LEVDGG+ +NI
Sbjct: 126 LDYVMDKMDMILLMSVNPGFGGQKFIPSTLQKITDLRQRITASGRDIRLEVDGGIGVQNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
+ AGAD V GS+ F +
Sbjct: 186 AEVAAAGADTFVAGSAIFGR 205
>gi|297623324|ref|YP_003704758.1| ribulose-phosphate 3-epimerase [Truepera radiovictrix DSM 17093]
gi|297164504|gb|ADI14215.1| ribulose-phosphate 3-epimerase [Truepera radiovictrix DSM 17093]
Length = 234
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 96/225 (42%), Positives = 142/225 (63%), Gaps = 4/225 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++++ PS+LAADF+RLG+E+ GA IH DVMDG FVPN+S G ++ + R +
Sbjct: 11 ARALKLAPSLLAADFARLGDELRAAEAGGADLIHVDVMDGHFVPNLSLGPLIVEACRRVT 70
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMISS + +I A+AG DIIT H E++PH+ R+L I G + GVA+NP T
Sbjct: 71 SLPLDVHLMISSPERYIGAFAEAGADIITVHAEATPHLHRALGLIRECGVQAGVALNPAT 130
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
P+ +L +V+ +D++L+M+VNPGFGGQ IE ++ ++R A+A+I + LEVDGG+
Sbjct: 131 PLTVLNEVLALVDLVLVMSVNPGFGGQTFIEGSLRRLRAARAIIDAQRPGCLLEVDGGIN 190
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
AGAD+LV GS+ F +G + A L L+++ D
Sbjct: 191 HETAPRAYHAGADVLVAGSAVFGGEGGV--AHNLTALREAVQRAD 233
>gi|329770348|ref|ZP_08261731.1| ribulose-phosphate 3-epimerase [Gemella sanguinis M325]
gi|328836706|gb|EGF86362.1| ribulose-phosphate 3-epimerase [Gemella sanguinis M325]
Length = 214
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 135/210 (64%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSIL+ADF+ L +IS + + G H DVMDG FVPNISFG +I ++RS ++ +F
Sbjct: 3 KILPSILSADFANLERDISELEEIGIDMFHIDVMDGNFVPNISFGFPIIEAIRSKTNKIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI++ ++++ AGCD+++FH E++ H R ++ I GKK G+ +NP+TP+
Sbjct: 63 DCHLMIANPENYVERFCQAGCDMVSFHIEATNHADRVIQVIKNCGKKAGIVLNPQTPIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ ++ ++D +LIMTVNPGFGGQ+ I + KI + + K + ++VDGG+ +
Sbjct: 123 VKYLLPKLDYVLIMTVNPGFGGQKFIPEMLEKIEELANIRVKNNYDFLIQVDGGINTETS 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K GADLLV GS F + + + L
Sbjct: 183 KLCRDKGADLLVCGSFLFGAEDKKNTLGDL 212
>gi|41222|emb|CAA79663.1| unnamed protein product [Escherichia coli]
Length = 221
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 92/197 (46%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR+Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + + EVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNI 185
Query: 184 KSLVQAGADLLVVGSSF 200
+ AGAD+ V GS+
Sbjct: 186 GEIAAAGADMFVAGSAI 202
>gi|116512859|ref|YP_811766.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
SK11]
gi|116108513|gb|ABJ73653.1| ribulose-5-phosphate 3-epimerase [Lactococcus lactis subsp.
cremoris SK11]
Length = 216
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 131/216 (60%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF ++ + AGA +H DVMDG FV N++FGA V+ +LRS + F
Sbjct: 4 KIAPSILSADFGNFARDVKQLEAAGADLVHIDVMDGHFVDNLTFGAGVVSALRSQTSLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + +++ A AG D ++ H E++ HI +L+ I G K V INP TPV
Sbjct: 64 DAHMMVENPEKYVDDFAKAGADSMSIHVEATNHIHGALQKIKNAGMKASVVINPGTPVEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ V+ +DM+L+MTVNPGFGGQ+ I + K+R+ + + + +EVDGG+ + I
Sbjct: 124 IKTVLPLVDMVLVMTVNPGFGGQKFIPEMMDKVRELTQIRTDKKLNFEIEVDGGIDDQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGA++ V GS FN + K + L+++
Sbjct: 184 QVAKAAGANVFVAGSFVFNGE----VEKNIEKLREN 215
>gi|306830177|ref|ZP_07463361.1| ribulose-phosphate 3-epimerase [Streptococcus mitis ATCC 6249]
gi|304427703|gb|EFM30799.1| ribulose-phosphate 3-epimerase [Streptococcus mitis ATCC 6249]
Length = 239
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ KIR+ AL ++ + +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKIRELVALSQEKGLSFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 237
>gi|150002658|ref|YP_001297402.1| ribulose-phosphate 3-epimerase [Bacteroides vulgatus ATCC 8482]
gi|254882157|ref|ZP_05254867.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 4_3_47FAA]
gi|294776912|ref|ZP_06742373.1| ribulose-phosphate 3-epimerase [Bacteroides vulgatus PC510]
gi|319643284|ref|ZP_07997912.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_40A]
gi|149931082|gb|ABR37780.1| ribulose-phosphate 3-epimerase [Bacteroides vulgatus ATCC 8482]
gi|254834950|gb|EET15259.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 4_3_47FAA]
gi|294449160|gb|EFG17699.1| ribulose-phosphate 3-epimerase [Bacteroides vulgatus PC510]
gi|317385188|gb|EFV66139.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_40A]
Length = 217
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 130/218 (59%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+A+F+ L +I I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MNRPL-ISPSLLSANFANLQADIEQINRSDADWLHIDIMDGVFVPNISFGFPVLKYVAEL 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+ D HLMI + + I + D G ++ H E+ H+ R ++ I G K V +NP
Sbjct: 60 SEKPLDVHLMIVNPEKFIKEVKDLGTMMMNVHYEACVHLHRVVQQIKDAGMKAAVTLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPVA+L D+I ++DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI +EVDGGV
Sbjct: 120 TPVAMLADIIRDVDMVLLMSVNPGFGGQKFIVHTLDKVRELRELITNTGSQALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+AGAD+LV G++ F RL L
Sbjct: 180 NLETGRQLVEAGADVLVAGNAVFKAPDMSDMIHRLKSL 217
>gi|189426657|ref|YP_001953834.1| ribulose-phosphate 3-epimerase [Geobacter lovleyi SZ]
gi|189422916|gb|ACD97314.1| Ribulose-phosphate 3-epimerase [Geobacter lovleyi SZ]
Length = 221
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADFSRLG+E+ + AGA IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 3 KIAPSILSADFSRLGDEVRAVEAAGADYIHIDVMDGRFVPNITIGPLVVEAVRKVTSLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ A AG DII H E+ H+ R ++ I +GKK GV++NP TP+ +
Sbjct: 63 DVHLMIEEPERYVEEFAKAGADIIVVHAEACRHLHRVVQQIKGLGKKAGVSLNPATPLHV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L+ V++E+D++L+MTVNPGFGGQ IE+ IPKI+ + ++ +R LE+DGG N+
Sbjct: 123 LDYVLEELDLVLLMTVNPGFGGQSFIEACIPKIQALRGMLDRRGCEAELEIDGGAKPSNV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGAD+LV GS+ F + + L +
Sbjct: 183 ARIAHAGADVLVAGSAVFGSNDYAATIAEMKRLMQ 217
>gi|218768246|ref|YP_002342758.1| putative ribulose-phosphate 3-epimerase [Neisseria meningitidis
Z2491]
gi|121052254|emb|CAM08579.1| putative ribulose-phosphate 3-epimerase [Neisseria meningitidis
Z2491]
gi|316985103|gb|EFV64056.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis H44/76]
gi|319410493|emb|CBY90854.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase;
PPE; R5P3E) [Neisseria meningitidis WUE 2594]
gi|325200125|gb|ADY95580.1| ribulose-phosphate 3-epimerase [Neisseria meningitidis H44/76]
Length = 242
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 108/226 (47%), Positives = 150/226 (66%), Gaps = 8/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE+ ++ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-TYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EV
Sbjct: 120 TPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPYTLEKIRQVRAMLDRYEEKSGRRIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
DGG+ + NI + QAGAD V GS+ F + + + +L+KS
Sbjct: 180 DGGIKTDNIAAAAQAGADTFVAGSAIFGKPDYKAVIDAMRAELEKS 225
>gi|326794315|ref|YP_004312135.1| ribulose-phosphate 3-epimerase [Marinomonas mediterranea MMB-1]
gi|326545079|gb|ADZ90299.1| ribulose-phosphate 3-epimerase [Marinomonas mediterranea MMB-1]
Length = 224
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSILAADF+RLGEE+ N+ +AGA IHFDVMD +VPN++ G V ++LR +
Sbjct: 1 MKDFIIAPSILAADFARLGEEVDNVLEAGADMIHFDVMDNHYVPNLTIGPMVCKALRKHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I +AG +ITFHP+ S HI RSL+ I G K+G+ NP
Sbjct: 61 VTADIDVHLMVKPVDRIIGDFIEAGASMITFHPQGSEHIDRSLQMIREGGCKSGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++DM+L+M+VNPGFGGQ+ I +T K+++A+ LI + + E+DGGV
Sbjct: 121 TPLSELQYVMDKVDMVLLMSVNPGFGGQKFIPATFDKLKEARKLIDESGYDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +NI + +AGAD V GS+ F + + +
Sbjct: 181 SEKNIAEVARAGADTFVAGSAIFGKPDYKAVIDAMRA 217
>gi|327405462|ref|YP_004346300.1| ribulose-phosphate 3-epimerase [Fluviicola taffensis DSM 16823]
gi|327320970|gb|AEA45462.1| ribulose-phosphate 3-epimerase [Fluviicola taffensis DSM 16823]
Length = 216
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 131/215 (60%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ DF L + I ++ A H DVMDG FVPNISFG +I +L+ +
Sbjct: 2 SVIIAPSILSCDFGNLERDFELINQSEADWFHVDVMDGVFVPNISFGFPIISALKKVAKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCH+MI + D I A AG DI+T H E+ H+ R++ IH G K GVA+NP TPV
Sbjct: 62 TIDCHIMIVNPDQFIAEFAKAGVDILTVHYEACTHLHRTIGAIHEAGMKAGVALNPHTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LE+VI ++D++LIM+VNPGFGGQ+ I I K++Q KALI K +EVDGGV
Sbjct: 122 SVLENVIADLDLVLIMSVNPGFGGQKFIHQAIEKVKQTKALIEKTGSKAIIEVDGGVNLE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K LV AGA LV GS FN + L L
Sbjct: 182 TGKLLVDAGAQALVAGSFVFNSPNPTATISSLKQL 216
>gi|255011312|ref|ZP_05283438.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis 3_1_12]
Length = 218
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 87/218 (39%), Positives = 128/218 (58%), Gaps = 2/218 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+ L +++ I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MNMKPIISPSILSADFAYLAKDLEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP
Sbjct: 61 TQKPLDVHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ + LI + +EVDGGV
Sbjct: 121 TPVALLQDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRELIERTGSKALIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD LV G++ F + + L
Sbjct: 181 NLETGARLVAAGADALVAGNAIFAAENPEETIHAMKGL 218
>gi|326803894|ref|YP_004321712.1| ribulose-phosphate 3-epimerase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651302|gb|AEA01485.1| ribulose-phosphate 3-epimerase [Aerococcus urinae ACS-120-V-Col10a]
Length = 215
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 80/217 (36%), Positives = 131/217 (60%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL AD R+ EE+ I +AGA +H D+MDG FVPN++FGA ++ +LR ++
Sbjct: 1 MKIAPSILNADTGRMREEVVRIEEAGADWVHVDIMDGHFVPNLTFGAPMVEALRPHTKLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCH+M+ + D +I +A AG D +T H E+ H+ R+++ I + G K VA+NP TPVA
Sbjct: 61 IDCHMMVDNPDDYIESLAQAGADSMTVHFEAVTHLHRTIQNIQSQGMKAAVALNPATPVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +++ +DM+L+MTVNPGFGGQ I + K+ + + ++ ++VDGG+ +
Sbjct: 121 AITPILNMVDMVLVMTVNPGFGGQAFIPDMVEKMTELDQIRQEKGYHYQIQVDGGIDNTT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ G D+ V GS + + + L+ +
Sbjct: 181 IRQCYDQGVDVFVSGSYVYKGDSN----QAIASLRDA 213
>gi|325103737|ref|YP_004273391.1| ribulose-phosphate 3-epimerase [Pedobacter saltans DSM 12145]
gi|324972585|gb|ADY51569.1| ribulose-phosphate 3-epimerase [Pedobacter saltans DSM 12145]
Length = 223
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L E+I + + A IH DVMDG FVPNISFG V+ ++++Y+ D
Sbjct: 5 IAPSILSADFANLKEDILMLNNSEADWIHVDVMDGLFVPNISFGFPVMAAVKNYALKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ AG ++IT H E+ H+ R++ I +G K GVA+NP TPV++L
Sbjct: 65 VHLMIVDPDRYLEAFKTAGANVITVHYEACTHLDRTVHKIKELGCKAGVALNPHTPVSLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E+VI+EIDM+LIM+VNPGFGGQ+ I++T KI++ +A+ +++ + +EVDGGV+S N
Sbjct: 125 ENVIEEIDMVLIMSVNPGFGGQKFIQNTYNKIQELRAMANEKNPSLLIEVDGGVSSHNSL 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+L++AGA++LV G++ F + + L
Sbjct: 185 ALLKAGANVLVAGNAIFGADDPVHAISEMKKL 216
>gi|319946188|ref|ZP_08020428.1| ribulose-phosphate 3-epimerase [Streptococcus australis ATCC
700641]
gi|319747570|gb|EFV99823.1| ribulose-phosphate 3-epimerase [Streptococcus australis ATCC
700641]
Length = 219
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 138/216 (63%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+AD++ E+ + +GA+ H DVMDG FVPNISFGA V+ S+R +S VF
Sbjct: 5 KLAPSILSADYANFESELKKLEASGAEYAHIDVMDGHFVPNISFGAGVVASMRPHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + HI A AG DII+ H E++PHI +L+ I G K V INP TPV
Sbjct: 65 DCHLMVTNPEQHIEEFARAGADIISIHVEATPHIHGALQKIRLAGVKPSVVINPGTPVES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ +++ +D +L+MTVNPGFGGQ + T+ KIRQ L ++ + +EVDGG+ + I
Sbjct: 125 IQHILNLVDQVLVMTVNPGFGGQAFLPETMDKIRQLVQLREEKGLDFDIEVDGGIDDKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGA++ V GS FN +R+ L+ +
Sbjct: 185 HAAKEAGANVFVAGSYVFNG----DVNERVQTLRAA 216
>gi|289167170|ref|YP_003445437.1| pentose-5-phosphate-3-epimerase [Streptococcus mitis B6]
gi|288906735|emb|CBJ21569.1| pentose-5-phosphate-3-epimerase [Streptococcus mitis B6]
Length = 218
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++ HI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATNHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKGE----VNERVQTLRKQ 216
>gi|146299192|ref|YP_001193783.1| ribulose-phosphate 3-epimerase [Flavobacterium johnsoniae UW101]
gi|146153610|gb|ABQ04464.1| Ribulose-phosphate 3-epimerase [Flavobacterium johnsoniae UW101]
Length = 220
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 100/218 (45%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+LAADF L ++ I + A H D+MDG FVPNISFG V+ ++ +
Sbjct: 1 MKNTF-IAPSVLAADFGNLQRDVEMINNSQADWFHIDIMDGVFVPNISFGMPVLEAISKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D +I AD G + +T H E+ H+ R+L+ I A G K GVAINP
Sbjct: 60 AKKYIDVHLMIIDPDRYIKTFADLGANGLTVHYEACTHLHRTLQAIKAEGMKAGVAINPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + +LEDVI++ID++ IM+VNPGFGGQ IE+T K+++ K LI +++ S +E+DGGV
Sbjct: 120 TNIDLLEDVINDIDLVCIMSVNPGFGGQSFIENTYAKVKKLKDLITRKNASTLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
T++N K LV+AGAD+LV GS F + I L L
Sbjct: 180 TNKNAKQLVEAGADVLVAGSFVFKAENPIETIADLKVL 217
>gi|329894601|ref|ZP_08270407.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC3088]
gi|328922955|gb|EGG30283.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC3088]
Length = 222
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 143/220 (65%), Gaps = 6/220 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEEVDAVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D+ I ADAG ITFHP++S H+ RSL I A G K G+ +NP
Sbjct: 66 DVHLMVSPVDALITQFADAGASYITFHPDASTHVDRSLSAIRAAGCKAGLVLNPHVSPEC 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++DM+L+M+VNPGFGGQ+ I ST+ K + + LI + + E+DGGVT+ NI
Sbjct: 126 LKYVMDKVDMVLLMSVNPGFGGQKFIPSTLEKCAEVRRLIDESGYDIRLEIDGGVTADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ +AGAD+ V GS+ FN+ YA+ + ++ ++
Sbjct: 186 ADIARAGADMFVAGSAIFNKPD---YAQAIAAMRAQLASV 222
>gi|163854627|ref|YP_001628925.1| ribulose-phosphate 3-epimerase [Bordetella petrii DSM 12804]
gi|163258355|emb|CAP40654.1| Ribulose-phosphate 3-epimerase [Bordetella petrii]
Length = 243
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 137/221 (61%), Gaps = 7/221 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 18 RIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPMVCAAIRPHVQVPI 77
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + A AG DIITFHP++S H+ R+L I G K G+ NP + +
Sbjct: 78 DVHLMVEPVDELVPQFAKAGADIITFHPDASRHVHRTLSLIRDHGCKAGLVFNPASSLDA 137
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVT 179
++ V++ +D++L+M+VNPGFGGQ I +T+ K+R A+A I + + I LEVDGGV
Sbjct: 138 MDHVMNLLDVVLLMSVNPGFGGQSFIPATLHKLRDARARIDRWMQAGGQPILLEVDGGVK 197
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
NI + AGAD V GS+ F + + L ++ K+
Sbjct: 198 VDNIAQIRAAGADTFVAGSAIFGHPDYAAVIQSLRGEIAKA 238
>gi|90415250|ref|ZP_01223184.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2207]
gi|90332573|gb|EAS47743.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2207]
Length = 222
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 142/223 (63%), Gaps = 5/223 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSIL+A+F+RLGEE+ + +AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MT-DFLIAPSILSANFARLGEEVDAVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I + ADAG ITFHPE+S H+ RSL+ + +G K G+ +NP
Sbjct: 60 GVTAPIDVHLMVQPVDDLIRMFADAGATYITFHPEASNHVDRSLQLVRDLGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + + V+D +DM+L+M+VNPGFGGQ+ I +T+ K+ +A+ LI I LE+DGG
Sbjct: 120 ATSLETVRWVMDRMDMLLLMSVNPGFGGQKFIPATLDKLAEARKLIDSSGHDIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
VT NI+ + AGAD V GS+ + ++ +L K+
Sbjct: 180 VTVNNIREIAAAGADTFVAGSAIYGADDYTDVIAKMRSELAKA 222
>gi|282866193|ref|ZP_06275240.1| ribulose-phosphate 3-epimerase [Streptomyces sp. ACTE]
gi|282558977|gb|EFB64532.1| ribulose-phosphate 3-epimerase [Streptomyces sp. ACTE]
Length = 227
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 88/203 (43%), Positives = 124/203 (61%), Gaps = 4/203 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL EE + GA +H DVMD FVPN++ G V+ +L +D+
Sbjct: 3 QINPSILSADFARLAEEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVEALSKATDTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TPV
Sbjct: 61 DCHLMIEDADRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPVEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV++ I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSASTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGE 206
+ +AGAD+ V GS+ + +
Sbjct: 181 ERCAEAGADVFVAGSAVYGAQDP 203
>gi|333029264|ref|ZP_08457325.1| ribulose-phosphate 3-epimerase [Bacteroides coprosuis DSM 18011]
gi|332739861|gb|EGJ70343.1| ribulose-phosphate 3-epimerase [Bacteroides coprosuis DSM 18011]
Length = 216
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 92/218 (42%), Positives = 136/218 (62%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+A+F+ L ++ I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--LISPSILSANFANLAADMKMINESEADWVHIDIMDGVFVPNISFGFPVLKYVAEL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLMI + I + D G +I+ H E+ PH+ R ++ I G K V INP
Sbjct: 59 TDKPLDVHLMIVQPEKFIQEVKDLGAEIMNVHYEACPHLHRVIQQIKEAGMKPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++L+D+I ++ M+LIM+VNPGFGGQ+ IE+ I K+++ KALI + + +EVDGGV
Sbjct: 119 TPVSLLKDIIKDVHMVLIMSVNPGFGGQKFIENAINKVKELKALIKESGSNAMIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K L++AGAD+LV GS+ F ++ +L
Sbjct: 179 NLETGKRLIEAGADVLVAGSAIFKATDPKEMILKMKNL 216
>gi|209542804|ref|YP_002275033.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530481|gb|ACI50418.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 225
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADFSR+ +E+S + +AGA +H DVMDG FVPN+SFGA +I++LR S VFD
Sbjct: 9 VAPSVLSADFSRMADEVSAVERAGADWLHLDVMDGHFVPNLSFGAQLIKALRPRSSLVFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D ++ + A AG D I H E+ PH R+L+ I ++G K GVAI P TP +
Sbjct: 69 VHLMMAPVDPYLEMFAQAGADHIHVHIEAGPHTHRTLQHIRSLGVKPGVAICPATPPEAV 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+V+D +D+IL+MTVNPGFGGQ+ + S + KIR + L R I + VDGGV
Sbjct: 129 AEVLDLVDVILVMTVNPGFGGQKFLTSQLGKIRTLRRLADATGRDIRIGVDGGVDVETAA 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGAD+LV G+S + Q Y + ++ L+++
Sbjct: 189 LATEAGADMLVAGTSVYGQPD---YGRAISALREA 220
>gi|331091579|ref|ZP_08340415.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
2_1_46FAA]
gi|330403606|gb|EGG83162.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
2_1_46FAA]
Length = 220
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 148/217 (68%), Gaps = 2/217 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PSILAADF +LGEEI K+GA+ +HFDVMDG FVP+ISFG V++S++S ++
Sbjct: 2 KYILAPSILAADFKKLGEEIQATEKSGAEYLHFDVMDGLFVPSISFGMPVLQSIKSCTNQ 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ ++ AG D+IT H E+ + ++L+ I G K G++I P+TPV
Sbjct: 62 VIDAHLMINEPIRYVEAFQKAGADLITVHLEACEDVHKTLQKIKECGMKAGISICPDTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ LE+ I+E DMILIM+V+PGFGGQ+ IE ++ KIR + ++ + + ++VDGG+ +
Sbjct: 122 SALEEYIEEADMILIMSVHPGFGGQKFIEDSLTKIRMTREMLNRYGLETDIQVDGGIYTS 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N++++++AGA+++V GS+ F + + + + LKK
Sbjct: 182 NVENVLKAGANIIVAGSAVFKGDAKENTKEFMEILKK 218
>gi|118463895|ref|YP_882552.1| ribulose-phosphate 3-epimerase [Mycobacterium avium 104]
gi|254775816|ref|ZP_05217332.1| ribulose-phosphate 3-epimerase [Mycobacterium avium subsp. avium
ATCC 25291]
gi|118165182|gb|ABK66079.1| ribulose-phosphate 3-epimerase [Mycobacterium avium 104]
Length = 232
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 83/219 (37%), Positives = 127/219 (57%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRL +E + +T GA +H DVMD FVPN++ G V++SL + + D
Sbjct: 13 IAPSILSADFSRLADEAAAVT--GADWLHVDVMDNHFVPNLTIGLPVVQSLLATTTIPMD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 71 CHLMIENPDRWAPPYAEAGAHNVTFHAEATDNPIGVARDIRAAGAKAGISVKPGTPLEPY 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+++ + D +LIM+V PGFGGQ I + K+R A+ LI + +I +E+DGG+ + I+
Sbjct: 131 LEILPQFDTLLIMSVEPGFGGQSFIPEVLGKVRTARKLIDAGELTILVEIDGGINADTIE 190
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+AG D V GS+ + + + L++ AL
Sbjct: 191 QAAEAGVDCFVAGSAVYGADDPAAAVEA---LRRQALGA 226
>gi|55821769|ref|YP_140211.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus LMG
18311]
gi|55823687|ref|YP_142128.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus
CNRZ1066]
gi|55737754|gb|AAV61396.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus LMG
18311]
gi|55739672|gb|AAV63313.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus
CNRZ1066]
Length = 239
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 134/214 (62%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ I +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 22 SYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 81
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H E++ HI +++ I A G K GV INP TPV
Sbjct: 82 VFDCHLMVVDPERYVTAYAQAGADIMTIHVEATKHIHGAIQKIKAAGMKAGVVINPGTPV 141
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L V+ +D +LIMTVNPGFGGQ I + K+ Q L K S +EVDGGV ++
Sbjct: 142 EALIPVLALVDQVLIMTVNPGFGGQTFIPEMMSKVEQVVELRQKGGYSFDIEVDGGVDNK 201
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 202 TIAACAKAGANVFVAGSYLFKNHDLTAQVQTLRD 235
>gi|94967105|ref|YP_589153.1| ribulose-5-phosphate 3-epimerase [Candidatus Koribacter versatilis
Ellin345]
gi|94549155|gb|ABF39079.1| ribulose-5-phosphate 3-epimerase [Candidatus Koribacter versatilis
Ellin345]
Length = 224
Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 135/218 (61%), Gaps = 2/218 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+RL E++ + G +HFDVMDG FVPNI+ G V++SLR +
Sbjct: 2 IELAPSILSADFARLAEQVEAAIQGGGTVVHFDVMDGHFVPNITIGPPVLKSLRKAVKAP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + D++I ADAG + I+ H E+ H+ R+L I G + GV INP TPV
Sbjct: 62 IDCHLMIENPDAYIPAFADAGANWISVHQEACLHLDRTLHLIRDHGCRAGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
L +V+D +D +L+M+VNPGFG Q I +T+ K+R+ AL + + +E+DGG+
Sbjct: 122 TLSEVLDIVDYVLVMSVNPGFGAQPFIPATLHKVRKLVALRNQGGTNFRIEIDGGMALDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I ++AG +++V G++ F + A+ L SA
Sbjct: 182 IGEAIRAGVEIVVAGNAVFGKGDPAENARELLKAANSA 219
>gi|325474689|gb|EGC77875.1| ribulose-phosphate 3-epimerase [Treponema denticola F0402]
Length = 209
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 95/209 (45%), Positives = 146/209 (69%), Gaps = 2/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ PS+L+ADFS+LGEE++ I K G +H DVMDG FVPN++FGA V++S+R
Sbjct: 1 MDRCFKLSPSLLSADFSKLGEELAFIEKHGGDWVHIDVMDGQFVPNLTFGAPVVKSIRPC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S +FD HLM+++ ++ ++ ADAG D TFH E+S H R + I + G K GV+I P
Sbjct: 61 SKLIFDVHLMVNNPENLVSAFADAGADYFTFHAEASIHADRLIADIRSYGMKAGVSIVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV ILE++ D+IL+M+VNPGFGGQ+LI + K+++ ++L +++ + + VDGG+
Sbjct: 121 TPVGILEEIAPLADLILVMSVNPGFGGQKLIPYCLEKVKRLRSLREEKNYNYLISVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
S+N+ S++ AGAD++V GS+FF+ I
Sbjct: 181 DSKNVGSVIDAGADVIVSGSAFFSGDLRI 209
>gi|313885011|ref|ZP_07818763.1| ribulose-phosphate 3-epimerase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619702|gb|EFR31139.1| ribulose-phosphate 3-epimerase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 223
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 99/214 (46%), Positives = 146/214 (68%), Gaps = 5/214 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF+ LG+ I + +AG IH DVMDG FVPNISFG V +++R +D
Sbjct: 2 IKIAPSILSADFANLGQAIQAMDQAGCDYIHIDVMDGSFVPNISFGPMVYQAVRPLTDKT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLM+ + +++++A AG DII+ H E++ HI +SL I A+GKK GV +NP T ++
Sbjct: 62 FDCHLMVDQPERYLDMVAAAGADIISVHVEATKHIYQSLSMIKALGKKAGVVLNPGTDLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ ++ D++LIMTVNPGFGGQ+ I++++ KI+Q K + ++ + +EVDGG+
Sbjct: 122 QIQPILHLCDLVLIMTVNPGFGGQKFIQASLEKIKQLKVMREEKGLDFEIEVDGGINFET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K+ QAGAD+LV GS FNQ +AK + D
Sbjct: 182 GKACAQAGADVLVSGSFLFNQTD---WAKAILDF 212
>gi|306824466|ref|ZP_07457812.1| ribulose-phosphate 3-epimerase [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304433253|gb|EFM36223.1| ribulose-phosphate 3-epimerase [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 239
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ A+ ++ ++ +EVDGG+ + I
Sbjct: 146 VKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVAIRQEKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 237
>gi|187778903|ref|ZP_02995376.1| hypothetical protein CLOSPO_02498 [Clostridium sporogenes ATCC
15579]
gi|187772528|gb|EDU36330.1| hypothetical protein CLOSPO_02498 [Clostridium sporogenes ATCC
15579]
Length = 216
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 105/213 (49%), Positives = 142/213 (66%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG VI+S+R+ ++
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADAIHIDVMDGRFVPNISFGIPVIKSIRNLTNKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A AG DI++ H E+ HI R++ I + G K VA+NP TPV+
Sbjct: 62 FDVHLMIEEPSKYIEDFAKAGADIVSVHYEADKHIDRTINYIKSFGIKAAVALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ KAL K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIKYASEKIKEVKALSEKYNKELIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + GA+LLV GS+ F K L +
Sbjct: 182 IKEVADCGANLLVAGSAVFKNGEIEKNIKVLRE 214
>gi|170016873|ref|YP_001727792.1| ribulose-phosphate 3-epimerase [Leuconostoc citreum KM20]
gi|169803730|gb|ACA82348.1| Ribulose-phosphate 3-epimerase [Leuconostoc citreum KM20]
Length = 218
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+AD++ L ++ + KAGA+ +H DVMDG FVP+IS+G + ++ LR +D +
Sbjct: 4 IISPSILSADYTNLERDVKLVEKAGAEYLHIDVMDGSFVPSISYGPNWVKQLRPETDMIL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + + ++ ADAG DII H E++PHI R+L+ I G K V INP TPV
Sbjct: 64 DVHLMVINPEKIVDAFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVTA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V+D +D +L+MTVNPGFGGQ+ + STI KI Q KAL +E+DGGV + I
Sbjct: 124 IEPVLDMVDQVLVMTVNPGFGGQKFLPSTIKKIAQLKALKDAMGYQFDIEIDGGVNNETI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGA++ V GS +++ + L L
Sbjct: 184 TAAYEAGANVFVAGSYVYDKVDPAAKIATLKAL 216
>gi|322387084|ref|ZP_08060695.1| ribulose-phosphate 3-epimerase [Streptococcus infantis ATCC 700779]
gi|321142071|gb|EFX37565.1| ribulose-phosphate 3-epimerase [Streptococcus infantis ATCC 700779]
Length = 239
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGQFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLKFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+
Sbjct: 206 AQAKEAGATVFVAGSYVFKG----DVNERVQALRNQ 237
>gi|332878132|ref|ZP_08445861.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332683870|gb|EGJ56738.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 215
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+LAADF L + + + + A H D+MDG FVPNIS+G V+ ++ ++
Sbjct: 1 MILSPSLLAADFGNLQQAVQMVNASEADWFHIDIMDGVFVPNISYGIPVLSAINKHATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I+ A G I+T H E+ H+ R+L+ I A G K GVA+NP TPV
Sbjct: 61 LDVHLMIIDPDRYISTFAKLGSHILTVHYEACTHLHRTLQAIKAEGMKAGVALNPHTPVT 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+LED+I ++D++L+M+VNPGFGGQ IE+T K+RQAKALI + + +E+DGGVT N
Sbjct: 121 LLEDIIKDVDLLLLMSVNPGFGGQSFIENTYKKVRQAKALITQAGANTLIEIDGGVTLSN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K+LV+AGAD LV GS FN L
Sbjct: 181 AKALVEAGADALVAGSFVFNAANPTQTIAELKA 213
>gi|154492626|ref|ZP_02032252.1| hypothetical protein PARMER_02260 [Parabacteroides merdae ATCC
43184]
gi|154087851|gb|EDN86896.1| hypothetical protein PARMER_02260 [Parabacteroides merdae ATCC
43184]
Length = 216
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LAADF L E+ I ++ A +H D+MDG FVPNISFG V+ +L+
Sbjct: 4 KIAPSLLAADFLNLQREVEMINESDADWLHLDIMDGVFVPNISFGFPVLEALKPICKKPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI I +A G ++ H E+ H+ R++ I G K V +NP TP+++
Sbjct: 64 DVHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKEAGMKAAVTLNPHTPISL 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED++ ++DM+L+M+VNPG+GGQ+ IE +I K + K +I + ++ +EVDGGV +
Sbjct: 124 LEDILQDLDMVLLMSVNPGYGGQKFIEHSIDKTARLKDMILAKGLNTLIEVDGGVNMQTA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K L++ GAD+LV GS F + + L DL
Sbjct: 184 KPLLEVGADVLVAGSFVFRSPDPLKTIRELKDL 216
>gi|71909095|ref|YP_286682.1| ribulose-5-phosphate 3-epimerase [Dechloromonas aromatica RCB]
gi|71848716|gb|AAZ48212.1| ribulose-5-phosphate 3-epimerase [Dechloromonas aromatica RCB]
Length = 233
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 137/220 (62%), Gaps = 9/220 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+A+F++LGEE++N+ +GA IHFDVMD +VPN++ G V ++R + + D
Sbjct: 8 IAPSILSANFAKLGEEVANVIASGADWIHFDVMDNHYVPNLTIGPLVCEAIRPCTTAPID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ +D I A AG +IITFHPE+S H+ RSL I G K G+ NP TP+ +
Sbjct: 68 VHLMVKPVDRIIPDFAKAGANIITFHPEASEHVDRSLSLIRDAGCKGGLVFNPATPLDYM 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ V+D+ID+IL+M+VNPGFGGQ+ I T+ K +QA+A + R I LE+DGGV +
Sbjct: 128 DYVLDKIDVILLMSVNPGFGGQKFIPGTLAKAKQARAKLDAYERETGRRIRLEIDGGVNT 187
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLK 217
NI + +AG D V GS+ + Y + L+
Sbjct: 188 ANIAEIARAGVDAFVAGSAVYGAGKDSDPHRYDSIIGALR 227
>gi|50424733|ref|XP_460956.1| DEHA2F13618p [Debaryomyces hansenii CBS767]
gi|49656625|emb|CAG89314.1| DEHA2F13618p [Debaryomyces hansenii]
Length = 232
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 126/221 (57%), Gaps = 9/221 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M SI I PSILA+DF+ LG + +GA +H DVMDG FVPNIS G +I SLR
Sbjct: 1 MVKSI-IAPSILASDFANLGCNCHRMYDSGADWLHIDVMDGHFVPNISMGPPIIDSLRKE 59
Query: 61 SD------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S FDCH+M+S + + IA AG D TFH ES+ ++ I + G K
Sbjct: 60 IPRSETKASFFDCHMMVSEPEKWVPEIAKAGGDQYTFHYESTKDPVALVKLIKSHGMKAA 119
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
A+ P TPV +L + +++DM L+MTV PGFGGQ+ + +PK+ + + ++++V
Sbjct: 120 CAVKPGTPVDVLYPLAEDLDMALVMTVEPGFGGQKFMPEMMPKVESLRQKFPE--LNIQV 177
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGG+ I + +AGA+++V G++ F + + L +
Sbjct: 178 DGGLGHETIPAAAEAGANVIVAGTAVFKAQDPKEMIQLLRN 218
>gi|30250082|ref|NP_842152.1| ribulose-phosphate 3-epimerase [Nitrosomonas europaea ATCC 19718]
gi|30139189|emb|CAD86059.1| Ribulose-phosphate 3-epimerase [Nitrosomonas europaea ATCC 19718]
Length = 226
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 5/223 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+F+RLGEEI+ + +GA IHFDVMD +VPN++ G V ++R + ++
Sbjct: 3 RIAPSILSANFARLGEEITQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTQAMI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +II+FHPE+S HI R++ I G K G+ NP TP++
Sbjct: 63 DVHLMVEPVDRIIPDFAKAGANIISFHPEASRHIDRTIGLIKEQGCKAGLVFNPATPLSY 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
L+ V+D++D+ILIM+VNPGFGGQ I + K+R + I R I LE+DGGV NI
Sbjct: 123 LDHVLDKLDLILIMSVNPGFGGQTFIPEALNKLRLTRERITASSRDILLEIDGGVKVDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKSALAI 223
+ +AGAD V GS+ + Y + ++ +
Sbjct: 183 AEIARAGADTFVAGSAIYGAGKESDPHRYDSIIAAMRAELAKV 225
>gi|303228551|ref|ZP_07315379.1| ribulose-phosphate 3-epimerase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516798|gb|EFL58712.1| ribulose-phosphate 3-epimerase [Veillonella atypica
ACS-134-V-Col7a]
Length = 216
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 135/214 (63%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+ADFS L +EI ++ AGA +H DVMDG FVPN++FG V++++R ++
Sbjct: 2 IKIAPSMLSADFSILRDEIKSVELAGADYLHIDVMDGHFVPNLTFGGPVVKAIRPHTALP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I + G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPADYVEEYAKIGVEYFTFHQETVPHMHRLIQQIKSAGMKAGVALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG---KRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I I K++QAK L+ +EVDGG+
Sbjct: 122 MLEDVAGDLDMILIMSVNPGFGGQSFIPRAIEKVKQAKLLLDSAGNNDAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGA +LV GS+ F + + +
Sbjct: 182 TCIPIKDAGATMLVAGSAVFGAPDRAKMIEAIRN 215
>gi|42528097|ref|NP_973195.1| ribulose-phosphate 3-epimerase [Treponema denticola ATCC 35405]
gi|41819142|gb|AAS13114.1| ribulose-phosphate 3-epimerase [Treponema denticola ATCC 35405]
Length = 209
Score = 267 bits (684), Expect = 7e-70, Method: Composition-based stats.
Identities = 96/209 (45%), Positives = 146/209 (69%), Gaps = 2/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ PS+L+ADFS+LGEE++ I K G +H DVMDG FVPN++FGA V++S+R
Sbjct: 1 MDRCFKLSPSLLSADFSKLGEELAFIEKHGGDWVHIDVMDGQFVPNLTFGAPVVKSIRPC 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFD HLM+++ ++ ++ ADAG D TFH E+S H R + I + G K GV+I P
Sbjct: 61 SKLVFDVHLMVNNPENLVSAFADAGADYFTFHAEASIHADRLIADIRSHGMKAGVSIVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV ILE++ D+IL+M+VNPGFGGQ+LI + K+++ ++L +++ + + VDGG+
Sbjct: 121 TPVGILEEIAPLADLILVMSVNPGFGGQKLIPYCLEKVKRLRSLREEKNYNYLISVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
S+N+ S++ AGAD++V GS+FF+ I
Sbjct: 181 DSKNVGSVIDAGADVIVSGSAFFSGDLRI 209
>gi|304413442|ref|ZP_07394915.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Regiella insecticola
LSR1]
gi|304284285|gb|EFL92678.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Regiella insecticola
LSR1]
Length = 245
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 6/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSILAA+F+RLGEE + + AGA IHFDVMD +VPN++FG+ V +SLR+Y
Sbjct: 20 MTP-FLIAPSILAANFARLGEETATVLAAGADVIHFDVMDNHYVPNLTFGSMVCQSLRNY 78
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I AG I+FHPE+S HI RSL+ I G K G+A NP
Sbjct: 79 GITAPIDVHLMVKPVDDLIAAFIKAGASSISFHPEASEHIDRSLQLIKDGGCKAGLAFNP 138
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDG 176
TP+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQA+ LI KR I L VDG
Sbjct: 139 ATPLHYLDYVMDKLDVILLMSVNPGFGGQSFIPATLNKLRQARELIDKRGYAEIRLAVDG 198
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
G+ + NI ++ AGAD+ + GS+ F Q + + + +L K A
Sbjct: 199 GINTENIYTVATAGADMFIAGSAIFAQSDYKAVIQTMRCELAKVA 243
>gi|255015480|ref|ZP_05287606.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_7]
Length = 216
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+ D
Sbjct: 5 IAPSLLSANFLDLRKEMEMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGA++LV G+ F I K L L
Sbjct: 185 RLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|120434743|ref|YP_860430.1| ribulose-phosphate 3-epimerase [Gramella forsetii KT0803]
gi|117576893|emb|CAL65362.1| ribulose-phosphate 3-epimerase [Gramella forsetii KT0803]
Length = 220
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 137/221 (61%), Gaps = 3/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PS+LA+DF L ++ I + A H D+MDG FVPNISFG V++++ +
Sbjct: 1 MSNKL-IAPSVLASDFGNLQRDVEMINNSEADWFHIDIMDGVFVPNISFGMPVLKAISKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D +I A G +I+T H E+ H+ R+L+ I A G K GVAINP
Sbjct: 60 AKKTIDVHLMIVDPDRYIKEFAQLGANILTVHYEACTHLHRTLQAIKAEGMKAGVAINPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T V +L+DVI +ID++ IM+VNPGFGGQ I++T K+++ K +I + S +E+DGGV
Sbjct: 120 TSVDLLKDVIKDIDLVCIMSVNPGFGGQSFIDNTFSKVQRLKEIIKMNNASTLIEIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
T +N L +AGAD+LV GS F + + K L + S
Sbjct: 180 TDKNAAELAKAGADVLVAGSFVFKTEDQPQTIKNLKKIANS 220
>gi|90407246|ref|ZP_01215433.1| Pentose-5-phosphate-3-epimerase [Psychromonas sp. CNPT3]
gi|90311669|gb|EAS39767.1| Pentose-5-phosphate-3-epimerase [Psychromonas sp. CNPT3]
Length = 226
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 137/211 (64%), Gaps = 3/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLG+++ + + GA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGDDVKKVLQDGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG IITFHPE+S H+ RSL+ I G K G+ +NP T + +
Sbjct: 66 DVHLMVKPVDTMIVDFAKAGASIITFHPEASEHVDRSLQLIKEHGCKAGLVLNPATSLEV 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L V+D++D+IL+M+VNPGFGGQ I T+ K+R K LI R I L+VDGGV NI
Sbjct: 126 LTHVMDKLDVILLMSVNPGFGGQSFIPHTLDKLRAVKKLIQASGRDIRLQVDGGVKIDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + +AGAD+ V GS+ FN+ + +
Sbjct: 186 QEIAEAGADMFVAGSAIFNEPDYKTVIDAMR 216
>gi|281492538|ref|YP_003354518.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
KF147]
gi|281376202|gb|ADA65693.1| Ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
KF147]
gi|326407476|gb|ADZ64547.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
CV56]
Length = 216
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 83/214 (38%), Positives = 127/214 (59%), Gaps = 6/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF ++ + AGA +H DVMDG FV N++FGA V+ +LR+ + F
Sbjct: 4 KIAPSILSADFGNFARDVKRLESAGADLVHIDVMDGHFVDNLTFGAGVVSALRAQTHLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + ++ A AG D ++ H E++ HI +L+ I G K V INP TPV
Sbjct: 64 DVHMMVENPEKYVEDFAKAGADSMSIHVEATHHIHGALQKIKNAGMKASVVINPGTPVEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ V+ +DM+L+MTVNPGFGGQ+ I + K+R+ + + +EVDGG+ + I
Sbjct: 124 IKTVLPLVDMVLVMTVNPGFGGQKFIPEMMDKVRELAQIRTDKKLDFEIEVDGGIDDQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K AGA++ V GS FN + K + L+
Sbjct: 184 KVAKAAGANVFVAGSFIFNGE----VEKNIEKLR 213
>gi|256839387|ref|ZP_05544896.1| ribulose-phosphate 3-epimerase [Parabacteroides sp. D13]
gi|298375096|ref|ZP_06985053.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_19]
gi|256738317|gb|EEU51642.1| ribulose-phosphate 3-epimerase [Parabacteroides sp. D13]
gi|298267596|gb|EFI09252.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_19]
Length = 216
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+ D
Sbjct: 5 IAPSLLSANFLDLRKEMEMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGA++LV G+ F I K L L
Sbjct: 185 RLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|225857556|ref|YP_002739067.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae P1031]
gi|225726253|gb|ACO22105.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae P1031]
Length = 218
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFVRAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQSKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|88801443|ref|ZP_01116971.1| putative ribulose-phosphate 3-epimerase [Polaribacter irgensii
23-P]
gi|88782101|gb|EAR13278.1| putative ribulose-phosphate 3-epimerase [Polaribacter irgensii
23-P]
Length = 218
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+ L +I + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 5 IAPSILAADFANLQRDIEMVNNSEADWFHIDIMDGVFVPNISFGMPVLKAIAKHAKKTID 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I AD G +I+T H E PH+ R+++ I G K GVA+NP TP+++L
Sbjct: 65 VHLMIVNPDQYIQTFADLGANILTVHYEVCPHLHRTIQAIKDAGMKAGVALNPHTPISVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
EDVI ++D++ IM+VNPGFGGQ IE+T K+ Q + LI +E+DGGVT+ N
Sbjct: 125 EDVIIDLDLVCIMSVNPGFGGQSFIENTYKKVSQLRQLIDFTASDCQIEIDGGVTNINAN 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+L++AGA++LV GS F + L +L
Sbjct: 185 ALIEAGANVLVAGSFVFGAENPTETISDLKNL 216
>gi|197124465|ref|YP_002136416.1| ribulose-phosphate 3-epimerase [Anaeromyxobacter sp. K]
gi|220919195|ref|YP_002494499.1| Ribulose-phosphate 3-epimerase [Anaeromyxobacter dehalogenans
2CP-1]
gi|196174314|gb|ACG75287.1| Ribulose-phosphate 3-epimerase [Anaeromyxobacter sp. K]
gi|219957049|gb|ACL67433.1| Ribulose-phosphate 3-epimerase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 224
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 91/222 (40%), Positives = 136/222 (61%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PSIL+ADF RL EE+ + AGA IH DVMDG FVPNI+ G V+ ++R
Sbjct: 1 MPLPIRIAPSILSADFGRLAEEVRAVEAAGADVIHVDVMDGRFVPNITIGPLVVEAVRKV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + ++ A AG D+++ H E SPH+ R+L+ I A G + VA+NP
Sbjct: 61 TKLPVDAHLMIVEPEKYVEAFAKAGADLVSVHAEVSPHLHRTLQAIRAAGARPAVALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
T + +E V+ + +M+L+MTVNPGFGGQ+ IE+ K+R+ +A+ R + +EVDGGV
Sbjct: 121 TDLTAVEYVLGDCEMVLVMTVNPGFGGQKYIEACTEKVRRLRAMADARGLALEIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA++LV G++ F Y + + ++ +A
Sbjct: 181 KPETAAKVAAAGANVLVAGTAVFGAPD---YRQAIAGIRAAA 219
>gi|182684917|ref|YP_001836664.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae CGSP14]
gi|182630251|gb|ACB91199.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae CGSP14]
Length = 239
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVFKGE----VNERVQTLRKQ 237
>gi|114332061|ref|YP_748283.1| ribulose-phosphate 3-epimerase [Nitrosomonas eutropha C91]
gi|114309075|gb|ABI60318.1| ribulose-5-phosphate 3-epimerase [Nitrosomonas eutropha C91]
Length = 226
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 136/223 (60%), Gaps = 5/223 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+A+F+RLGEE++ + +GA IHFDVMD +VPN++ G V ++R + ++
Sbjct: 3 RIAPSILSANFARLGEEVTQVLDSGADIIHFDVMDNHYVPNLTIGPLVCEAIRPLTKAII 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +II+FHPE+S HI R++ I G K G+ NP TP++
Sbjct: 63 DVHLMVEPVDRIIPDFAKAGANIISFHPEASRHIDRTIGLIKEQGCKAGMVFNPATPLSY 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+ILIM+VNPGFGGQ I + K+R + I R I LE+DGGV NI
Sbjct: 123 LDHVLDKLDLILIMSVNPGFGGQAFIPEALNKLRLTRERINASGRDILLEIDGGVKVSNI 182
Query: 184 KSLVQAGADLLVVGSSFF---NQKGEISYAKRLNDLKKSALAI 223
+ +AGAD V GS+ + Y + ++ +
Sbjct: 183 AEIARAGADTFVAGSAIYSAGKDSDPHRYDSVIAAMRAELAKV 225
>gi|167999253|ref|XP_001752332.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696727|gb|EDQ83065.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 125/222 (56%), Gaps = 6/222 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P +I PS+L++DFS L E I + GA +H DVMDG FVPN++ GA VI+SLR ++
Sbjct: 10 PRAKIAPSMLSSDFSNLASEAKFIEECGADWLHMDVMDGHFVPNLTIGAPVIKSLRKHTK 69
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPET 121
DCHLM+++ +++ AG TFH E + + + + I A G + GVA+ P T
Sbjct: 70 MYMDCHLMVTNPMDYVDEFVKAGASGFTFHVEVAKDNWQELIHKIKAGGMRAGVALRPGT 129
Query: 122 PVAILEDVIDE---IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
PV + +++ +DM+L+MTV PGFGGQ + T+PK+ + + +EVDGG+
Sbjct: 130 PVEEVFPLVESQEPVDMVLVMTVEPGFGGQSFMPETMPKVNALRRKF--PLLDIEVDGGL 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
IK +AGA+ +V GS+ F K L +A
Sbjct: 188 APATIKQAAEAGANCIVAGSAVFGAKDPAEVIATLRQGVDAA 229
>gi|255690470|ref|ZP_05414145.1| ribulose-phosphate 3-epimerase [Bacteroides finegoldii DSM 17565]
gi|260623919|gb|EEX46790.1| ribulose-phosphate 3-epimerase [Bacteroides finegoldii DSM 17565]
Length = 216
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 134/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF +L ++I I ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFGQLAKDIEMINRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + I + G + H E+ PH+ R ++ I G + V INP
Sbjct: 59 SKKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + +L+DL
Sbjct: 179 NLETGARLVEAGADALVAGNAVFAAPDPEAMIHQLHDL 216
>gi|323340713|ref|ZP_08080965.1| ribulose-phosphate 3-epimerase [Lactobacillus ruminis ATCC 25644]
gi|323091836|gb|EFZ34456.1| ribulose-phosphate 3-epimerase [Lactobacillus ruminis ATCC 25644]
Length = 220
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF+ L ++ + +AGAK +H D+MDG FV N++FG +V+++LR S+
Sbjct: 1 MIIAPSILSADFANLAADVKAVEEAGAKYLHIDIMDGHFVDNLTFGPNVVKALRPLSNLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLM+ + ++ A AG D++ H E++ H R + IH +G K + +NP T +
Sbjct: 61 FDCHLMVEDPEKYLQDFAAAGADLVGVHIEATKHAHRVISKIHQLGMKAEIVLNPGTSLE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++V+ +D +LIMTV+PGFGGQ +E T+ KI +A+ + +++ +EVDGG+ +
Sbjct: 121 FAKEVLPLVDSVLIMTVDPGFGGQAFLEETVSKIAEAEKYRKEHNLNYQIEVDGGINDQT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK+ AGA + V GS F+Q K+L +
Sbjct: 181 IKTAKAAGATIAVAGSYVFSQNTPEEQIKKLIE 213
>gi|242278711|ref|YP_002990840.1| ribulose-phosphate 3-epimerase [Desulfovibrio salexigens DSM 2638]
gi|242121605|gb|ACS79301.1| ribulose-phosphate 3-epimerase [Desulfovibrio salexigens DSM 2638]
Length = 222
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 91/209 (43%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+ DFSRL +E+ + +AG K H DVMDG FVPNI+FG VI+S+R
Sbjct: 3 AKETIISPSLLSCDFSRLADELKALEEAGLKWAHLDVMDGKFVPNITFGPPVIKSMRKEC 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ FDCHLMI + +I+ DAG D++ H ES+ H+ R++ I G K +A+NP T
Sbjct: 63 NLFFDCHLMIEQPERYIDEFCDAGADLLCIHAESTVHLERAVAAIAEKGVKPAIALNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ ++ +I ++ M+LIM+VNPGFGGQ+ I K+R +A+I + +++DGGVT
Sbjct: 123 PLESIKYLIPQLHMVLIMSVNPGFGGQKYIPFCTQKVRDLRAMIDEMGADTLIQLDGGVT 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
N + LV+AGAD+LV GS+FF
Sbjct: 183 MENCRELVEAGADVLVSGSAFFKYPPYAE 211
>gi|116622297|ref|YP_824453.1| ribulose-5-phosphate 3-epimerase [Candidatus Solibacter usitatus
Ellin6076]
gi|116225459|gb|ABJ84168.1| ribulose-5-phosphate 3-epimerase [Candidatus Solibacter usitatus
Ellin6076]
Length = 224
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 138/221 (62%), Gaps = 2/221 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+IVPSIL+ADF+RL +EI+ + + GA+ +H DVMDG FV N++ G V+ S+R +
Sbjct: 2 IEIVPSILSADFARLADEIARVERGGARMLHLDVMDGHFVDNLTIGPPVVESVRKNTSLH 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + ++ A AG + I+ H E+ H+ L I G GV +NP TPV
Sbjct: 62 LDVHLMIENPERYVESFARAGANSISVHYEAVRHLDGVLGLIRKAGAMAGVVLNPATPVG 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+LEDV+ D +L+M+VNPGFGGQ+LI + K+R+ ++ ++ ++ +E+DGGV N
Sbjct: 122 VLEDVLGMADYVLLMSVNPGFGGQKLIPYVLDKVRKLDSMRREKKLALLIEIDGGVHKEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ +V+AG D +V GS+ F+ + + + ++ A A+
Sbjct: 182 LAEVVRAGCDWIVTGSAIFHSPDPEATMREMREIAAHATAV 222
>gi|319953758|ref|YP_004165025.1| ribulose-phosphate 3-epimerase [Cellulophaga algicola DSM 14237]
gi|319422418|gb|ADV49527.1| ribulose-phosphate 3-epimerase [Cellulophaga algicola DSM 14237]
Length = 215
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 134/214 (62%), Gaps = 2/214 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+LAADF L ++ I + A H D+MDG FVPNIS+G V++++ Y+
Sbjct: 1 MIAPSLLAADFGNLQRDVEMINNSNADWHHIDIMDGVFVPNISYGIPVVKAIAKYATKPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D +I A+ G ++ H E+ H+ R+L+ I A G K GVA+NP T + +
Sbjct: 61 DVHLMIVDPDRYIKTFAELGATNLSVHYEACTHLHRTLQAIKAEGMKAGVALNPHTNIML 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED I +ID++ +M+VNPGFGGQ IE+T KIR KALI ++ +E+DGGVT +N
Sbjct: 121 LEDTIKDIDVVCMMSVNPGFGGQSFIENTYDKIRALKALIERKGAKTLIEIDGGVTDKNA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K+L AGAD+LV GS FN K + + L D+
Sbjct: 181 KALKDAGADVLVAGSFIFNSKDPVKTIQELKDIA 214
>gi|237712463|ref|ZP_04542944.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 9_1_42FAA]
gi|237726654|ref|ZP_04557135.1| ribulose-phosphate 3-epimerase [Bacteroides sp. D4]
gi|265752169|ref|ZP_06087962.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_33FAA]
gi|229435180|gb|EEO45257.1| ribulose-phosphate 3-epimerase [Bacteroides dorei 5_1_36/D4]
gi|229453784|gb|EEO59505.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 9_1_42FAA]
gi|263236961|gb|EEZ22431.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_33FAA]
Length = 217
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 87/218 (39%), Positives = 129/218 (59%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+A+F+ L +I I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MNRPL-ISPSLLSANFANLQADIEQINRSDADWLHIDIMDGVFVPNISFGFPVLKYVAEL 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + I + D G ++ H E+ H+ R ++ I G K V +NP
Sbjct: 60 CEKPLDVHLMIVNPEKFIKEVKDLGTMMMNVHYEACVHLHRVVQQIKDAGMKAAVTLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPVA+L D+I ++DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI +EVDGGV
Sbjct: 120 TPVAMLVDIIRDVDMVLLMSVNPGFGGQKFIVHTLDKVRELRELITHTGSRALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+AGAD+LV G++ F RL L
Sbjct: 180 NLETGRQLVEAGADVLVAGNAVFKAPDMSDMIHRLKSL 217
>gi|167767850|ref|ZP_02439903.1| hypothetical protein CLOSS21_02387 [Clostridium sp. SS2/1]
gi|317497156|ref|ZP_07955482.1| ribulose-phosphate 3 epimerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|167710589|gb|EDS21168.1| hypothetical protein CLOSS21_02387 [Clostridium sp. SS2/1]
gi|291558823|emb|CBL37623.1| ribulose-phosphate 3-epimerase [butyrate-producing bacterium SSC/2]
gi|316895566|gb|EFV17722.1| ribulose-phosphate 3 epimerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 218
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 145/213 (68%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF+ LG ++ KAGAK +H DVMDG FVPNIS G VI+SLR ++++F
Sbjct: 4 ILSPSILSADFANLGADVKEAVKAGAKWVHIDVMDGMFVPNISLGLPVIKSLRKETEALF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +I+ A+AG D+IT H E++ H+ R+++ + A G K GVA+NP TP++
Sbjct: 64 DVHLMIEEPGRYIDDFAEAGADLITLHAEATKHLHRAIQQVKAKGLKVGVALNPATPLSA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+ V++E+DM+LIMTVNPG+GGQ I KI++ +A+I ++ I +EVDGG++++N+
Sbjct: 124 LDYVLEELDMVLIMTVNPGYGGQSYIAKMDDKIKELRAIINEKGLDIDIEVDGGISAKNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + GA++ V GS+ FN S L +
Sbjct: 184 AHVKECGANVFVAGSAVFNGDIASSAKDILEAM 216
>gi|295109194|emb|CBL23147.1| ribulose-phosphate 3-epimerase [Ruminococcus obeum A2-162]
Length = 224
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 141/223 (63%), Gaps = 2/223 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PSIL+ADF+RLGE+I + +AG K +H DVMDG FVP+ISFG VI+S+R S
Sbjct: 2 EYRLCPSILSADFNRLGEQIQALERAGVKWLHIDVMDGDFVPSISFGMPVIKSIRKESRM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+S+ + +I + G D +T H E+ + R++ I G K G++I P TPV
Sbjct: 62 FFDVHLMVSAPERYIQDFVECGADSVTVHAEACEDLERAIELIKDAGVKVGISIKPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ +++++DM+LIMTV PGFGGQ+ + KI + K +I + + +EVDGG+
Sbjct: 122 NDISHLLEDVDMVLIMTVQPGFGGQKYLTECTEKIEELKEIIDREGLNVDIEVDGGINDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+++ ++AGA++LV GS FN E + K N +K+ + ID
Sbjct: 182 TLETAMKAGANILVAGSYVFNGDLESNVHKIQNKMKEISERID 224
>gi|298503753|ref|YP_003725693.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
TCH8431/19A]
gi|298239348|gb|ADI70479.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
TCH8431/19A]
Length = 239
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 86 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRQEKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVFKGE----VNERVQTLRKQ 237
>gi|254489785|ref|ZP_05102980.1| ribulose-phosphate 3-epimerase [Methylophaga thiooxidans DMS010]
gi|224464870|gb|EEF81124.1| ribulose-phosphate 3-epimerase [Methylophaga thiooxydans DMS010]
Length = 230
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 138/221 (62%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
+I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR +
Sbjct: 3 EFKIAPSILSADFARLGEEVDNVLASGADIVHFDVMDNHYVPNLTIGPLVCDALRKHGVT 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D I A AG ITFHPE+S HI RSL+ + A G KTG+ NP TP
Sbjct: 63 HEIDVHLMVKPVDRIIPDFAKAGASFITFHPEASEHIDRSLQLVKAEGCKTGLVFNPATP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+++ E V+D++D IL+M+VNPGFGGQ+ I T+ K++QA+ LI + E+DGGV
Sbjct: 123 LSLAEHVLDKVDRILLMSVNPGFGGQKFIPHTLDKLQQARKLIDASGYDIDLEIDGGVNV 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLKK 218
NI+ + +AGA V GS+ F + Y + L++
Sbjct: 183 NNIREIAEAGARTFVAGSAVFGAANDNDANKYETVIAALRE 223
>gi|301309165|ref|ZP_07215109.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 20_3]
gi|300832847|gb|EFK63473.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 20_3]
Length = 216
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+S D
Sbjct: 5 IAPSLLSANFLDLRKEVGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKSICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGA++LV G+ F I K L L
Sbjct: 185 RLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|116495102|ref|YP_806836.1| Pentose-5-phosphate-3-epimerase [Lactobacillus casei ATCC 334]
gi|191638607|ref|YP_001987773.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BL23]
gi|239631981|ref|ZP_04675012.1| pentose-5-phosphate-3-epimerase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066666|ref|YP_003788689.1| pentose-5-phosphate-3-epimerase [Lactobacillus casei str. Zhang]
gi|116105252|gb|ABJ70394.1| ribulose-5-phosphate 3-epimerase [Lactobacillus casei ATCC 334]
gi|190712909|emb|CAQ66915.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BL23]
gi|239526446|gb|EEQ65447.1| pentose-5-phosphate-3-epimerase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439073|gb|ADK18839.1| Pentose-5-phosphate-3-epimerase [Lactobacillus casei str. Zhang]
gi|327382649|gb|AEA54125.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei LC2W]
gi|327385843|gb|AEA57317.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BD-II]
Length = 216
Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 130/217 (59%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L ++ + KAGA +H DVMDG FV N++FG V+++LR +
Sbjct: 1 MKIAPSILSADFAHLARDVEKVEKAGADLLHVDVMDGHFVSNLTFGPLVVQALRPVTSLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+S + + A+AG D I H E++ H+ L+ + G + GV INP TP++
Sbjct: 61 LEVHLMVSDPAAWVADFAEAGADTILVHEEATDHLYGVLQHVIEKGVRAGVVINPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
LE+V+ +D +L+MTVNPGFGGQ+ + + K+ + L R +EVDGG+ ++
Sbjct: 121 SLEEVLPLVDQVLVMTVNPGFGGQKFLTPMVDKVDRLYQLRKARKLHFDIEVDGGINNQT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K+ AG D+ V GS F K +N L+++
Sbjct: 181 VKAAADAGTDIFVAGSYVFGSKNVGD---AMNSLREA 214
>gi|332885336|gb|EGK05587.1| ribulose-phosphate 3-epimerase [Dysgonomonas mossii DSM 22836]
Length = 216
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF L +I + + A H DVMDG FVPNISFG +I+ + +
Sbjct: 4 KIAPSLLSADFLNLQADIEMVNNSEADWFHCDVMDGTFVPNISFGFPIIKQISKMAKKPL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + D +I ++ DAG ++ H E+ H+ R++ IH G K V +NP TPV +
Sbjct: 64 DVHLMIVNPDQYIPVVKDAGAYMMNVHYEACVHLHRTIAAIHDAGMKAAVTLNPHTPVCL 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED++ ++DM+L+M+VNPGFGGQ+ IE T+ K+ K +I +R + +EVDGGV
Sbjct: 124 LEDILQDLDMVLLMSVNPGFGGQKFIERTLDKVSCLKDMIVRRGLHTLIEVDGGVNLETG 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K LV AGAD+LV G++ F +L L
Sbjct: 184 KRLVDAGADVLVAGNAVFADANPTEMIHKLKSL 216
>gi|53717342|ref|YP_105303.1| ribulose-phosphate 3-epimerase [Burkholderia mallei ATCC 23344]
gi|67640253|ref|ZP_00439067.1| ribulose-phosphate 3-epimerase [Burkholderia mallei GB8 horse 4]
gi|121597346|ref|YP_990248.1| ribulose-phosphate 3-epimerase [Burkholderia mallei SAVP1]
gi|124383018|ref|YP_001024747.1| ribulose-phosphate 3-epimerase [Burkholderia mallei NCTC 10229]
gi|126447297|ref|YP_001079085.1| ribulose-phosphate 3-epimerase [Burkholderia mallei NCTC 10247]
gi|167003482|ref|ZP_02269268.1| ribulose-phosphate 3-epimerase [Burkholderia mallei PRL-20]
gi|167740337|ref|ZP_02413111.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 14]
gi|167817554|ref|ZP_02449234.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 91]
gi|167825956|ref|ZP_02457427.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 9]
gi|167912677|ref|ZP_02499768.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 112]
gi|226192990|ref|ZP_03788601.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei Pakistan
9]
gi|254175852|ref|ZP_04882511.1| ribulose-phosphate 3-epimerase [Burkholderia mallei ATCC 10399]
gi|254203269|ref|ZP_04909631.1| ribulose-phosphate 3-epimerase [Burkholderia mallei FMH]
gi|254208605|ref|ZP_04914954.1| ribulose-phosphate 3-epimerase [Burkholderia mallei JHU]
gi|254355759|ref|ZP_04972038.1| ribulose-phosphate 3-epimerase [Burkholderia mallei 2002721280]
gi|52423312|gb|AAU46882.1| ribulose-phosphate 3-epimerase [Burkholderia mallei ATCC 23344]
gi|121225144|gb|ABM48675.1| ribulose-phosphate 3-epimerase [Burkholderia mallei SAVP1]
gi|124291038|gb|ABN00308.1| ribulose-phosphate 3-epimerase [Burkholderia mallei NCTC 10229]
gi|126240151|gb|ABO03263.1| ribulose-phosphate 3-epimerase [Burkholderia mallei NCTC 10247]
gi|147746314|gb|EDK53392.1| ribulose-phosphate 3-epimerase [Burkholderia mallei FMH]
gi|147751292|gb|EDK58360.1| ribulose-phosphate 3-epimerase [Burkholderia mallei JHU]
gi|148024730|gb|EDK82913.1| ribulose-phosphate 3-epimerase [Burkholderia mallei 2002721280]
gi|160696895|gb|EDP86865.1| ribulose-phosphate 3-epimerase [Burkholderia mallei ATCC 10399]
gi|225934960|gb|EEH30936.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei Pakistan
9]
gi|238520945|gb|EEP84401.1| ribulose-phosphate 3-epimerase [Burkholderia mallei GB8 horse 4]
gi|243060996|gb|EES43182.1| ribulose-phosphate 3-epimerase [Burkholderia mallei PRL-20]
Length = 231
Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 141/229 (61%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LE+
Sbjct: 120 TPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEI 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV + NI + AGAD V GS+ F + Y + + +++ + +
Sbjct: 180 DGGVKAENIAEIAAAGADTFVAGSAIFGKPD---YRQVIGEMRDALATV 225
>gi|254481066|ref|ZP_05094312.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2148]
gi|214038861|gb|EEB79522.1| ribulose-phosphate 3-epimerase [marine gamma proteobacterium
HTCC2148]
Length = 222
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 146/220 (66%), Gaps = 6/220 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N+ +AGA +HFDVMD +VPN++ G V ++LR++ +
Sbjct: 6 IAPSILSADFARLGEEVDNVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRNHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +DS I A+AG ITFHP++S H+ RSL+ I + G ++G+ NP +
Sbjct: 66 DVHLMVSPVDSLIGDFAEAGASFITFHPDASTHVDRSLQMIRSAGCQSGLVFNPAMGLDA 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+D++DMIL+M+VNPGFGGQ I T+ K+R+A+ LI + E+DGGV+++NI
Sbjct: 126 LKYVMDKVDMILLMSVNPGFGGQSFIPGTLDKLREARTLIDASGYDIRLEIDGGVSAKNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ AGAD V GS+ FNQ YA + +++ +
Sbjct: 186 AEIAAAGADTFVAGSAIFNQPD---YATVIAEMRSQLATV 222
>gi|328353328|emb|CCA39726.1| ribulose-phosphate 3-epimerase [Pichia pastoris CBS 7435]
Length = 238
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 127/229 (55%), Gaps = 12/229 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M +I I PSIL+ADFS LG E + K A +H DVMDG FVPN++ G +I SLR
Sbjct: 1 MVKTI-IAPSILSADFSNLGCECHKMFKLRADWVHIDVMDGHFVPNLTMGPPIISSLRKA 59
Query: 60 --------YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
+ FDCH+M+++ + + +A AG D TFH E++ + + I + G
Sbjct: 60 VPRGEKDGQTTHFFDCHMMVANPEQWVPEVAKAGGDQYTFHYEATKDPVKLVELIKSHGL 119
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
K AI P T V +L + D++DM L+MTV PGFGGQ+ + +PK+ +A ++
Sbjct: 120 KAACAIKPGTSVDVLYPLADKLDMALVMTVEPGFGGQKFMADMMPKVEALRAKF--PNLD 177
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++VDGG+ I AGA+++V GSS F K + L D ++A
Sbjct: 178 IQVDGGLGKETIGVAADAGANVIVAGSSVFGAKDPGEVIRYLRDTVENA 226
>gi|170761808|ref|YP_001787817.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A3 str. Loch
Maree]
gi|169408797|gb|ACA57208.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A3 str. Loch
Maree]
Length = 216
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 105/213 (49%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A AG DII+ H E+ HI R++ I + G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFAKAGADIISVHYEADKHIDRTINYIKSFGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ +AL K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVRALSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + GADLLV GS+ F K L +
Sbjct: 182 IKEIADCGADLLVAGSAVFKNGEIEKNIKVLRE 214
>gi|15673906|ref|NP_268081.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
Il1403]
gi|12724963|gb|AAK06022.1|AE006423_1 ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. lactis
Il1403]
Length = 216
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 6/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF ++ + AGA +H DVMDG FV N++FGA V+ +LR + F
Sbjct: 4 KIAPSILSADFGNFARDVKRLESAGADLVHIDVMDGHFVDNLTFGAGVVSALRVQTHLFF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + + ++ A AG D ++ H E++ HI +L+ I G K V INP TPV
Sbjct: 64 DVHMMVENPEKYVEDFAKAGADSMSIHVEATHHIHGALQKIKNAGMKASVVINPGTPVEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
++ V+ +DM+L+MTVNPGFGGQ+ I + K+R+ + + +EVDGG+ + I
Sbjct: 124 IKTVLPLVDMVLVMTVNPGFGGQKFIPEMMDKVRELAQIRTDKKLDFEIEVDGGIDDQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K AGA++ V GS FN + K + L+
Sbjct: 184 KVAKAAGANVFVAGSFIFNGE----VEKNIEKLR 213
>gi|317153913|ref|YP_004121961.1| ribulose-phosphate 3-epimerase [Desulfovibrio aespoeensis Aspo-2]
gi|316944164|gb|ADU63215.1| ribulose-phosphate 3-epimerase [Desulfovibrio aespoeensis Aspo-2]
Length = 216
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 91/202 (45%), Positives = 131/202 (64%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L++DF+ L E++ + +AG +H DVMDG FVPNI+FG +I+++R+ SD
Sbjct: 1 MILSPSMLSSDFANLQSELAALKQAGLTWVHLDVMDGMFVPNITFGPPIIKAMRARSDLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLMI +I ADAG D+I H E+ H+ R I G K VA+NP TP+
Sbjct: 61 FDCHLMIREPGRYIRDFADAGADLICVHAEACDHLERVCAQIAETGAKPAVALNPHTPLD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+L +I ++ M+LIM+VNPGFGGQ+ I + K+R+ K +I ++VDGGVT N
Sbjct: 121 VLRYLIPQLSMVLIMSVNPGFGGQKFIPFCMDKVRELKGMITAAGSGTLIQVDGGVTLDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ LV+AGAD+LV GS+FF
Sbjct: 181 ARELVEAGADVLVSGSAFFGHP 202
>gi|160880616|ref|YP_001559584.1| ribulose-phosphate 3-epimerase [Clostridium phytofermentans ISDg]
gi|160429282|gb|ABX42845.1| Ribulose-phosphate 3-epimerase [Clostridium phytofermentans ISDg]
Length = 220
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 106/210 (50%), Positives = 140/210 (66%), Gaps = 2/210 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFS LGE I +AGA +H DVMDG FVP+ISFG VI SLR S VFD
Sbjct: 4 LSPSILAADFSALGENIRKAEEAGATYLHLDVMDGNFVPSISFGMPVITSLRDKSSMVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I A AG DIIT H ES H+ R++ + +GKK GVA+NP TP+++L
Sbjct: 64 VHLMIEEPIRYIEDFAKAGADIITVHAESCKHLHRTVTAVKELGKKVGVALNPSTPLSVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+ ++ E+DM+LIM+VNPGFGGQ+ I ST+ K+R K + + I +EVDGGVT N+
Sbjct: 124 DYILPELDMVLIMSVNPGFGGQKFIPSTLQKLRDLKKMANDLNVTIDIEVDGGVTLENVS 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++AGA++LV G+S F E + LN
Sbjct: 184 EIMEAGANVLVAGTSVFRGDIEKNVEGFLN 213
>gi|296205467|ref|XP_002749783.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 1
[Callithrix jacchus]
Length = 228
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+++V GS+ + S L +
Sbjct: 179 GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
>gi|139439667|ref|ZP_01773080.1| Hypothetical protein COLAER_02108 [Collinsella aerofaciens ATCC
25986]
gi|133775008|gb|EBA38828.1| Hypothetical protein COLAER_02108 [Collinsella aerofaciens ATCC
25986]
Length = 223
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 146/219 (66%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PS+L+AD + L E+ I AGA +HFDVMDG F N++FG D++++++ +D
Sbjct: 3 SIKIAPSVLSADMANLKGELDKI--AGADYVHFDVMDGHFTGNLTFGVDILKAVKRSTDV 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+S+ D ++ ADAG D+IT H E+S H+ R+L + G K GV +NP TPV
Sbjct: 61 PVDAHLMVSNPDETVDWYADAGADMITVHYEASTHLHRTLTHLQQRGVKAGVVLNPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LE +ID +DM+L+M+VNPGFGGQ I TI K+++ KA+ + +S +EVDGG++S+
Sbjct: 121 CVLESIIDVVDMVLLMSVNPGFGGQSFIPGTIAKLQELKAMCERHGVSPLIEVDGGISSK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI +V+AGA++LV GS+ F + + L L A
Sbjct: 181 NIAEVVKAGANVLVAGSAVFKSEDPAAEVALLQKLGNEA 219
>gi|254822404|ref|ZP_05227405.1| ribulose-phosphate 3-epimerase [Mycobacterium intracellulare ATCC
13950]
Length = 247
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 125/223 (56%), Gaps = 6/223 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADFSRL +E + +T GA +H DVMD FVPN++ G V+ SL + +
Sbjct: 23 SKGPLIAPSILSADFSRLADEAAAVT--GADWLHVDVMDNHFVPNLTLGLPVVESLLAAT 80
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
DCHLMI D A+AG +TFH E++ + R I A G K G+++ P T
Sbjct: 81 TIPMDCHLMIEDPDRWAPPYAEAGAYNVTFHAEATQNPIAVARDIRAAGAKAGISVKPGT 140
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
P+ +++ + D +LIM+V PGFGGQ I + K+R A+ LI + +I +E+DGG+
Sbjct: 141 PLEPYLEILPQFDTLLIMSVEPGFGGQSFIPEVLSKVRTARKLIDAGELTILVEIDGGIN 200
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AG D V GS+ + + L +++A A
Sbjct: 201 GDTIEQAAEAGVDCFVAGSAVYGAADPETAIDALR--RQAAAA 241
>gi|15903839|ref|NP_359389.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae R6]
gi|116515540|ref|YP_817202.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae D39]
gi|148985563|ref|ZP_01818752.1| purine operon repressor [Streptococcus pneumoniae SP3-BS71]
gi|148989983|ref|ZP_01821258.1| purine operon repressor [Streptococcus pneumoniae SP6-BS73]
gi|148998513|ref|ZP_01825954.1| purine operon repressor [Streptococcus pneumoniae SP11-BS70]
gi|149003643|ref|ZP_01828508.1| purine operon repressor [Streptococcus pneumoniae SP14-BS69]
gi|149007458|ref|ZP_01831101.1| purine operon repressor [Streptococcus pneumoniae SP18-BS74]
gi|149021933|ref|ZP_01835920.1| purine operon repressor [Streptococcus pneumoniae SP23-BS72]
gi|168484282|ref|ZP_02709234.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1873-00]
gi|168489988|ref|ZP_02714187.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP195]
gi|168576617|ref|ZP_02722483.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae MLV-016]
gi|225859738|ref|YP_002741248.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae 70585]
gi|237651000|ref|ZP_04525252.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae CCRI 1974]
gi|237822558|ref|ZP_04598403.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae CCRI
1974M2]
gi|303254094|ref|ZP_07340209.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS455]
gi|303260356|ref|ZP_07346326.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP-BS293]
gi|303262504|ref|ZP_07348446.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
SP14-BS292]
gi|303265135|ref|ZP_07351048.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS397]
gi|303266003|ref|ZP_07351898.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS457]
gi|303268065|ref|ZP_07353866.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS458]
gi|307068591|ref|YP_003877557.1| pentose-5-phosphate-3-epimerase [Streptococcus pneumoniae AP200]
gi|15459482|gb|AAL00600.1| Pentose-5-phosphate-3-epimerase [Streptococcus pneumoniae R6]
gi|116076116|gb|ABJ53836.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae D39]
gi|147755706|gb|EDK62752.1| purine operon repressor [Streptococcus pneumoniae SP11-BS70]
gi|147758375|gb|EDK65375.1| purine operon repressor [Streptococcus pneumoniae SP14-BS69]
gi|147761030|gb|EDK67999.1| purine operon repressor [Streptococcus pneumoniae SP18-BS74]
gi|147922283|gb|EDK73404.1| purine operon repressor [Streptococcus pneumoniae SP3-BS71]
gi|147924643|gb|EDK75729.1| purine operon repressor [Streptococcus pneumoniae SP6-BS73]
gi|147929971|gb|EDK80959.1| purine operon repressor [Streptococcus pneumoniae SP23-BS72]
gi|172042513|gb|EDT50559.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1873-00]
gi|183571610|gb|EDT92138.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP195]
gi|183577613|gb|EDT98141.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae MLV-016]
gi|225721860|gb|ACO17714.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae 70585]
gi|301800744|emb|CBW33392.1| putative ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
OXC141]
gi|301802660|emb|CBW35426.1| putative ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
INV200]
gi|302598927|gb|EFL65958.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS455]
gi|302636404|gb|EFL66897.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
SP14-BS292]
gi|302638522|gb|EFL68987.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP-BS293]
gi|302642425|gb|EFL72771.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS458]
gi|302644444|gb|EFL74696.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS457]
gi|302645352|gb|EFL75586.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae BS397]
gi|306410128|gb|ADM85555.1| Pentose-5-phosphate-3-epimerase [Streptococcus pneumoniae AP200]
gi|332071960|gb|EGI82448.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA17545]
gi|332072064|gb|EGI82551.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA17570]
gi|332199297|gb|EGJ13375.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA41317]
gi|332199408|gb|EGJ13485.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA47368]
Length = 218
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKGE----VNERVQTLRKQ 216
>gi|182419307|ref|ZP_02950560.1| ribulose-phosphate 3-epimerase [Clostridium butyricum 5521]
gi|237668991|ref|ZP_04528975.1| ribulose-phosphate 3-epimerase [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182376947|gb|EDT74518.1| ribulose-phosphate 3-epimerase [Clostridium butyricum 5521]
gi|237657339|gb|EEP54895.1| ribulose-phosphate 3-epimerase [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 226
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 96/202 (47%), Positives = 143/202 (70%), Gaps = 2/202 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LG E+ I +AGA +H DVMDG +VP+IS G VI+S+R Y++ +
Sbjct: 12 IKIAPSILSADFSKLGSELEIIDRAGADYVHIDVMDGLYVPSISLGFPVIKSIRKYTEMI 71
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + D +I A +G DIIT H E+S HI R+++ I GK+ VAINP T +
Sbjct: 72 FDVHLMVQNPDKYIEEAALSGADIITVHAEASTHIHRTIQKIKECGKRACVAINPGTNID 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
++E +++++DMIL+MTVNPGFGGQ+ IE+ KI + + + +R++++ EVDGG+ N
Sbjct: 132 VVEYILEDLDMILLMTVNPGFGGQEYIETMTNKISRLRKKLNERNLNIDVEVDGGIKLSN 191
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+S++ AGA++LV GS F
Sbjct: 192 AESVINAGANVLVSGSGIFKGN 213
>gi|323700858|ref|ZP_08112770.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. ND132]
gi|323460790|gb|EGB16655.1| ribulose-phosphate 3-epimerase [Desulfovibrio desulfuricans ND132]
Length = 216
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L++DF+ + E+ + AG +H DVMDG FVPNI+FG +I+++R+ S
Sbjct: 1 MILSPSMLSSDFANMETELKALEAAGLSWVHLDVMDGMFVPNITFGPPIIKAMRAKSKLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLMI+ +I ADAG D+I H E+ H+ R I G K VA+NP TP
Sbjct: 61 FDCHLMINDPGRYIGDFADAGADLICVHAEACTHLERVCAQIVEAGAKPAVALNPHTPPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ ++ M+LIM+VNPGFGGQ+ I + K+R KA+I + +++DGGVT N
Sbjct: 121 AIRYLLPQLYMVLIMSVNPGFGGQKFIPFCLDKVRDLKAMIDRAGADTLIQIDGGVTLDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ L +AG D+LV GS+FF K D
Sbjct: 181 ARELTEAGVDVLVSGSAFFKHPPYGERHKAFQD 213
>gi|163751647|ref|ZP_02158867.1| ribulose-phosphate 3-epimerase [Shewanella benthica KT99]
gi|161328473|gb|EDP99628.1| ribulose-phosphate 3-epimerase [Shewanella benthica KT99]
Length = 224
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 142/227 (62%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+A+F+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MRP-FLIAPSILSANFARLGEDVDAVLNAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG IITFHPE++ H+ RSL+ I G K G+ NP
Sbjct: 60 GVTAEIDVHLMVKPVDRMIVDFAKAGASIITFHPEATDHLDRSLQLIKESGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
+P+ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ K LI + +VDGG
Sbjct: 120 GSPLHYLDHVMDKLDVILLMSVNPGFGGQSFIPATLDKLRQVKQLIDASGFDIRLQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V NI + AGAD+ V GS+ FN+ Y +++++ ++
Sbjct: 180 VKVDNIAEIATAGADMFVAGSAIFNKPD---YKAVIDEMRSELAKLE 223
>gi|121592794|ref|YP_984690.1| ribulose-5-phosphate 3-epimerase [Acidovorax sp. JS42]
gi|222109570|ref|YP_002551834.1| ribulose-phosphate 3-epimerase [Acidovorax ebreus TPSY]
gi|120604874|gb|ABM40614.1| ribulose-5-phosphate 3-epimerase [Acidovorax sp. JS42]
gi|221729014|gb|ACM31834.1| ribulose-phosphate 3-epimerase [Acidovorax ebreus TPSY]
Length = 226
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 143/223 (64%), Gaps = 8/223 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++L+ +
Sbjct: 1 MSRTYRIAPSILSADFARLGEEVRNVIAAGADWIHFDVMDNHYVPNLTFGPMVCQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM+ +D A AG D+I+FHP++S H+ RS++ I A G K G
Sbjct: 61 AVTPAGHAVPIDVHLMVQPVDELATAFAKAGADLISFHPDASAHVHRSIQNIRAQGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP P+ +L+ VI++ID+IL+M+VNPGFGGQ I+ST+ KI A+ I + I L
Sbjct: 121 LTFNPAMPLDVLDWVIEDIDLILLMSVNPGFGGQSFIDSTLRKIEAARRRIEASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
EVDGG+ + NI+ + AGAD V GS+ F + + +
Sbjct: 181 EVDGGIKADNIRRVADAGADTFVAGSAIFGKSDYKAVIDAMRA 223
>gi|307709724|ref|ZP_07646175.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK564]
gi|307619426|gb|EFN98551.1| ribulose-phosphate 3-epimerase [Streptococcus mitis SK564]
Length = 218
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKLLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 ALAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|303232089|ref|ZP_07318792.1| ribulose-phosphate 3-epimerase [Veillonella atypica ACS-049-V-Sch6]
gi|302513195|gb|EFL55234.1| ribulose-phosphate 3-epimerase [Veillonella atypica ACS-049-V-Sch6]
Length = 216
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 136/214 (63%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+ADFS L +EI ++ AGA +H DVMDG FVPN++FG V++++R ++
Sbjct: 2 IKIAPSMLSADFSILRDEIKSVELAGADYLHIDVMDGHFVPNLTFGVPVVKAIRPHTALP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I + G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPADYVEEYAKIGVEYFTFHQETVPHMHRLIQQIKSAGMKAGVALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I I K++QAK L+ + +EVDGG+
Sbjct: 122 MLEDVAGDLDMILIMSVNPGFGGQSFIPRAIEKVKQAKLLLDSAGNNDAIIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGA +LV GS+ F + + +
Sbjct: 182 TCIPIKDAGATMLVAGSAVFGAPDRAKMIEAIRN 215
>gi|303280253|ref|XP_003059419.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459255|gb|EEH56551.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 270
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 139/221 (62%), Gaps = 5/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S+ + PSIL+A+F+ LG E+ + +AGA+ IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 47 KNSVIVSPSILSANFATLGAEVKAVDEAGAEWIHIDVMDGRFVPNITIGPLVVDALRPVT 106
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE---SSPHIRRSLRTIHAMGKKTGVAIN 118
D V DCHLMI + + A AG DII+ H + S+ H+ R++ I +G K GV +N
Sbjct: 107 DKVLDCHLMIVEPELRVADFAKAGADIISVHADPGTSTIHLHRTVNQIKDLGCKAGVVLN 166
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP LE V+D +D+IL+M+VNPGFGGQ IES + KI + KA+ + ++ +EVDG
Sbjct: 167 PGTPPECLEYVLDCVDLILVMSVNPGFGGQSFIESQVEKIAKIKAMCDAKGVNPWIEVDG 226
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
GVT N +++AGA+ LV GS+ FN + + K
Sbjct: 227 GVTPANAYKVIEAGANALVAGSAVFNSPDYAAAIAGIKASK 267
>gi|293372313|ref|ZP_06618698.1| ribulose-phosphate 3-epimerase [Bacteroides ovatus SD CMC 3f]
gi|292632755|gb|EFF51348.1| ribulose-phosphate 3-epimerase [Bacteroides ovatus SD CMC 3f]
Length = 216
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 133/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + I + G + H E+ PH+ R ++ I G + V INP
Sbjct: 59 SQKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + +L++L
Sbjct: 179 NLETGARLVEAGADALVAGNAVFAAPDPEAMISQLHEL 216
>gi|225861800|ref|YP_002743309.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230179|ref|ZP_06963860.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|225728041|gb|ACO23892.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|327389147|gb|EGE87493.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA04375]
Length = 218
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRQEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKGE----VNERVQTLRKQ 216
>gi|300313179|ref|YP_003777271.1| ribulose-5-phosphate 3-epimerase [Herbaspirillum seropedicae SmR1]
gi|300075964|gb|ADJ65363.1| ribulose-5-phosphate 3-epimerase protein [Herbaspirillum
seropedicae SmR1]
Length = 221
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 135/216 (62%), Gaps = 2/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MPTYRIAPSILSADFARLGEEVRNVVAAGADFIHFDVMDNHYVPNLTIGPLVCEAIRPHV 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ +D I A AG ++ITFHPE+S HI RSL+ I G K G+ NP T
Sbjct: 61 QVPIDVHLMVKPVDRIIPDFAKAGANLITFHPEASEHIDRSLQLIRDNGCKAGLVFNPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ L+ V+D++DM+LIM+VNPGFGGQ I + KI + + I + R I LEVDGG+
Sbjct: 121 PLHYLDHVMDKLDMVLIMSVNPGFGGQSFIPEALKKIAEVRRRIDESGRDILLEVDGGIK 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD V GS+ F + + +
Sbjct: 181 IENIAAAARAGADTFVAGSAIFGKPDYKAVIDAMRA 216
>gi|291518524|emb|CBK73745.1| ribulose-phosphate 3-epimerase [Butyrivibrio fibrisolvens 16/4]
Length = 217
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF L E++ I +AGA+ +HFDVMDG FVP+ISFG V+R++R Y+D +FD
Sbjct: 5 LAPSILSADFGILKEQLQLIDQAGAQYVHFDVMDGVFVPSISFGLPVLRTIRKYTDRLFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ A+AG DIIT H E+ H+ ++ I + G GVAINP TP++ +
Sbjct: 65 VHLMIVDPERYVKEFAEAGADIITVHAEACKHLDATIDLIKSSGVMAGVAINPATPLSDI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
V++++DM+LIMTVNPGFGGQ +I T+ K+R+ + ++ I +EVDGGV I+
Sbjct: 125 MHVLEKVDMVLIMTVNPGFGGQSMIPYTLDKVRELSVMARQKKLKIDIEVDGGVNENTIE 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++AGA+++V GS+ FN +++ + L +
Sbjct: 185 DVLEAGANIIVAGSAVFNGDAKLNAERLLEKM 216
>gi|40385883|ref|NP_954699.1| ribulose-phosphate 3-epimerase isoform 1 [Homo sapiens]
gi|109100810|ref|XP_001109838.1| PREDICTED: ribulose-phosphate 3-epimerase isoform 5 [Macaca
mulatta]
gi|114583049|ref|XP_001146078.1| PREDICTED: ribulose-phosphate 3-epimerase isoform 9 [Pan
troglodytes]
gi|332209938|ref|XP_003254067.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 1 [Nomascus
leucogenys]
gi|34924986|sp|Q96AT9|RPE_HUMAN RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Ribulose-5-phosphate-3-epimerase
gi|325533958|pdb|3OVP|A Chain A, Crystal Structure Of Hrpe
gi|325533959|pdb|3OVP|B Chain B, Crystal Structure Of Hrpe
gi|325533960|pdb|3OVQ|A Chain A, Crytal Structure Of Hrpe And D-Ribulose-5-Phospate Complex
gi|325533961|pdb|3OVQ|B Chain B, Crytal Structure Of Hrpe And D-Ribulose-5-Phospate Complex
gi|325533962|pdb|3OVR|A Chain A, Crystal Structure Of Hrpe And D-Xylulose 5-Phosphate
Complex
gi|325533963|pdb|3OVR|B Chain B, Crystal Structure Of Hrpe And D-Xylulose 5-Phosphate
Complex
gi|16876982|gb|AAH16764.1| Ribulose-5-phosphate-3-epimerase [Homo sapiens]
gi|38013941|gb|AAH05148.2| Ribulose-5-phosphate-3-epimerase [Homo sapiens]
gi|48735264|gb|AAH72401.1| Ribulose-5-phosphate-3-epimerase [Homo sapiens]
gi|119590880|gb|EAW70474.1| ribulose-5-phosphate-3-epimerase, isoform CRA_c [Homo sapiens]
gi|158255506|dbj|BAF83724.1| unnamed protein product [Homo sapiens]
gi|190689795|gb|ACE86672.1| ribulose-5-phosphate-3-epimerase protein [synthetic construct]
gi|190691163|gb|ACE87356.1| ribulose-5-phosphate-3-epimerase protein [synthetic construct]
gi|261860682|dbj|BAI46863.1| ribulose-5-phosphate-3-epimerase [synthetic construct]
Length = 228
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+++V GS+ + S L +
Sbjct: 179 GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
>gi|56964078|ref|YP_175809.1| ribulose-phosphate 3-epimerase [Bacillus clausii KSM-K16]
gi|56910321|dbj|BAD64848.1| ribulose-phosphate 3-epimerase [Bacillus clausii KSM-K16]
Length = 215
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSILA DFSR+GE + AGA IH DVMDG FVP I+FG ++ ++R Y+D
Sbjct: 2 IKVAPSILAGDFSRMGETVQACDNAGADWIHVDVMDGQFVPPITFGHQMVEAIRPYTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I AG D ++ H E+S H+ R++ I G K G+ +NP TP
Sbjct: 62 LDVHLMVEQPEKQIAFFQQAGADCLSVHVEASAHLHRTVAAIKEAGMKAGIVLNPGTPAY 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
E V+ ++D +L MTVNPGFGGQ I + I++ +A+I +R + ++VDGG+
Sbjct: 122 AAEPVLADVDYVLQMTVNPGFGGQSFIPGALANIKKLRAMIDERQLPVDIQVDGGINPTT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ VQAGA +LV GS+ F + ++
Sbjct: 182 AQQCVQAGATILVAGSAVFKEADLAKAIAQIR 213
>gi|298373305|ref|ZP_06983294.1| ribulose-phosphate 3-epimerase [Bacteroidetes oral taxon 274 str.
F0058]
gi|298274357|gb|EFI15909.1| ribulose-phosphate 3-epimerase [Bacteroidetes oral taxon 274 str.
F0058]
Length = 218
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 127/218 (58%), Gaps = 2/218 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + PS+L+ADF L +I + ++ A +H D+MDG FVPNISFG V+ +
Sbjct: 1 MNNYKMLAPSLLSADFGNLARDIEIVNRSSADWLHIDIMDGVFVPNISFGFPVLEYVNKL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI I G ++ H E SPH+ RS+ I G K GV +NP
Sbjct: 61 SQKPLDVHLMIVEPTKFIEECKRVGAMMMNIHYEVSPHLHRSVTAIRNAGMKAGVTLNPH 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LED++ ++D++L+M+VNPGFGGQ+ IE+T KI + +++I +R +EVDGGV
Sbjct: 121 TPVELLEDIVADVDLVLLMSVNPGFGGQKFIENTYSKIARLRSMIERRGSKALIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N L QAGAD+LV G++ F + + +L
Sbjct: 181 NLDNAARLYQAGADVLVAGNAVFRSGDIAATIEAFKNL 218
>gi|224372281|ref|YP_002606653.1| ribulose-phosphate 3-epimerase [Nautilia profundicola AmH]
gi|223589773|gb|ACM93509.1| ribulose-phosphate 3-epimerase [Nautilia profundicola AmH]
Length = 213
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 133/215 (61%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF L E++ + AGA IH DVMDG FVPN++ G +++++ +
Sbjct: 1 MKIAPSILSADFGNLAEDVKAVCDAGADLIHVDVMDGHFVPNMTMGPMIVKAVAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+ I I++ D + I+FH E HI R ++ I G + V +NP TPV+
Sbjct: 61 LDIHFMVEDIPFFIDLYKDLKPEFISFHIEEEKHINRVIQKIRNEGIRPAVVLNPATPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+LE ++ ++DM+L+M+VNPGFGGQ+ I S + K ++ + L K++ + +E+DGGV +N
Sbjct: 121 LLEYIVADVDMVLLMSVNPGFGGQKFIPSVLDKTKELRELAEKKNPSLLIEIDGGVNDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L +AGAD+LV GS F Y+K +N L+
Sbjct: 181 APLLKEAGADILVAGSYVFGSDD---YSKVINSLR 212
>gi|220931841|ref|YP_002508749.1| Ribulose-phosphate 3-epimerase [Halothermothrix orenii H 168]
gi|219993151|gb|ACL69754.1| Ribulose-phosphate 3-epimerase [Halothermothrix orenii H 168]
Length = 217
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 144/220 (65%), Gaps = 7/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PSIL+ADFS L EE++ + + A +H DVMDG FVPNI+ G +I+S+R ++D
Sbjct: 2 VEFAPSILSADFSNLKEEVARVKE--ANYLHLDVMDGMFVPNITIGPGIIKSIRKHTDLK 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I A+AG DIIT H E++ H+ R + I G GVA+NP T +
Sbjct: 60 FDTHLMIEEPERYIKDFAEAGSDIITVHCEATKHLHRLIYQIKDQGCLAGVALNPATSLT 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+E V+ ++D++LIM+VNPGFGGQ+LI T+ KI+ K I + ++S+ E+DGG+ + N
Sbjct: 120 RIEHVLKDLDLVLIMSVNPGFGGQKLIPETLNKIKTIKQKIRELNLSIKVEIDGGINNSN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+K + + G D++V GS+ F Q K L++LK+ ++
Sbjct: 180 VKDVSRTGVDIIVAGSAIFGQPDP---GKALSELKERVIS 216
>gi|322377597|ref|ZP_08052087.1| ribulose-phosphate 3-epimerase [Streptococcus sp. M334]
gi|321281362|gb|EFX58372.1| ribulose-phosphate 3-epimerase [Streptococcus sp. M334]
Length = 218
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 136/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVESLRHHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRKEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGA + V GS F + +R+ L+K
Sbjct: 185 AQAKAAGATVFVAGSYVFKGE----VNERVQTLRKQ 216
>gi|148230294|ref|NP_001087964.1| ribulose-5-phosphate-3-epimerase [Xenopus laevis]
gi|52078454|gb|AAH82474.1| LOC494647 protein [Xenopus laevis]
Length = 228
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL +D SRL E + ++GA +H DVMDG FVPNI+FG V+ LR
Sbjct: 1 MSSGCKIGPSILNSDLSRLAAECDRMLQSGADYLHLDVMDGHFVPNITFGHPVVECLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
S+ FD H+M++ + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGSNPFFDMHMMVAQPEQWVKPMATAGANQYTFHLEATNNTGALIKDIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ ++ S+ +EVDGGV
Sbjct: 121 PNTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
NI +AGA+++V GS+ + S L
Sbjct: 179 GPDNIHRCAEAGANMIVSGSAIMKSEDPRSVINLLR 214
>gi|126441158|ref|YP_001060559.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 668]
gi|126453569|ref|YP_001067812.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1106a]
gi|134283276|ref|ZP_01769977.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 305]
gi|167721367|ref|ZP_02404603.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei DM98]
gi|167847441|ref|ZP_02472949.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei B7210]
gi|167904415|ref|ZP_02491620.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei NCTC
13177]
gi|167920643|ref|ZP_02507734.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei BCC215]
gi|217424724|ref|ZP_03456221.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 576]
gi|237813944|ref|YP_002898395.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei MSHR346]
gi|242316229|ref|ZP_04815245.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1106b]
gi|254180522|ref|ZP_04887120.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1655]
gi|254190504|ref|ZP_04897012.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei Pasteur
52237]
gi|254198454|ref|ZP_04904875.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei S13]
gi|254259223|ref|ZP_04950277.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1710a]
gi|254300757|ref|ZP_04968202.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 406e]
gi|126220651|gb|ABN84157.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 668]
gi|126227211|gb|ABN90751.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1106a]
gi|134245471|gb|EBA45564.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 305]
gi|157810577|gb|EDO87747.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 406e]
gi|157938180|gb|EDO93850.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei Pasteur
52237]
gi|169655194|gb|EDS87887.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei S13]
gi|184211061|gb|EDU08104.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1655]
gi|217392180|gb|EEC32205.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 576]
gi|237504076|gb|ACQ96394.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei MSHR346]
gi|242139468|gb|EES25870.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1106b]
gi|254217912|gb|EET07296.1| ribulose-phosphate 3-epimerase [Burkholderia pseudomallei 1710a]
Length = 228
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 141/229 (61%), Gaps = 10/229 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE+S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEASDHIDRTLGLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D++LIM+VNPGFGGQ I + K+R+A+A I R I LE+
Sbjct: 120 TPLNYLDHVMDRVDLVLIMSVNPGFGGQSFIPEALNKLREARARIDAYTARTGREIHLEI 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
DGGV + NI + AGAD V GS+ F + Y + + +++ + +
Sbjct: 180 DGGVKAENIAEIAAAGADTFVAGSAIFGKPD---YRQVIGEMRDALATV 225
>gi|110632367|ref|YP_672575.1| ribulose-5-phosphate 3-epimerase [Mesorhizobium sp. BNC1]
gi|110283351|gb|ABG61410.1| ribulose-5-phosphate 3-epimerase [Chelativorans sp. BNC1]
Length = 223
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 110/218 (50%), Positives = 161/218 (73%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ ++I PSILA+DFSRLGEE++ + AGA IH D+MDG FVPNI+FG V++++R +
Sbjct: 4 SRPVKIAPSILASDFSRLGEEVTAVAAAGADWIHLDIMDGHFVPNITFGPPVVKAIRDRT 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ VFDCHLMI+ D ++ A+AGCD++T H E+ PH+ RSL+TI +GKK GV++NP T
Sbjct: 64 NKVFDCHLMIAPADPYLAAFAEAGCDVLTVHAEAGPHLHRSLQTIRKLGKKAGVSLNPAT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P + +E V+D++D+ILIMTVNPGFGGQ I S + KIR+ + ++G R I +EVDGG+T+
Sbjct: 124 PESAIEYVLDDVDLILIMTVNPGFGGQAFIPSAVKKIRRVRQMVGNRPIDIEVDGGITAE 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N ++V AGA++LV GSS F GE +Y + + ++ +
Sbjct: 184 NAGAVVAAGANVLVAGSSIFKGNGEDAYRQNIAAIRTA 221
>gi|81428309|ref|YP_395309.1| ribulose-phosphate 3-epimerase [Lactobacillus sakei subsp. sakei
23K]
gi|78609951|emb|CAI54998.1| Ribulose-phosphate 3-epimerase [Lactobacillus sakei subsp. sakei
23K]
Length = 220
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 129/218 (59%), Gaps = 7/218 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF L ++ N+ AGA +H D+MDG FVPN+SFGA V+ +R +
Sbjct: 3 QIAPSILSADFMNLQRDVQNLEAAGADLLHIDIMDGMFVPNMSFGAQVVSGIRPLTQLGL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + +I AG D+I H E++ H+ R L+ I G K GV INP TPV+
Sbjct: 63 DVHLMVEQPERYIEQFITAGSDLIMIHAEATEHLYRGLQMIKDAGVKAGVVINPGTPVSY 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA---KALIGKRSISLEVDGGVTSRN 182
+E V+ +D +L+MTVNPGFGGQ+ I + + K+ + + ++EVDGGV +
Sbjct: 123 IESVLPLVDQVLVMTVNPGFGGQKFIPAMLTKVAELAAYREAHADADFTIEVDGGVNDQT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + +AGAD+ V GS F A R+ LKK+A
Sbjct: 183 IAACAKAGADVFVAGSYTFAG----DLATRIETLKKAA 216
>gi|312793234|ref|YP_004026157.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180374|gb|ADQ40544.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 221
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 93/218 (42%), Positives = 130/218 (59%), Gaps = 2/218 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DF+ L E+ + AGA +H DVMDG FV +I+ GA V+RSLR SD
Sbjct: 2 QIKIAPSILSSDFADLKSELKKLELAGADLVHIDVMDGNFVDSITIGAPVVRSLRKNSDL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TPV
Sbjct: 62 FFDVHLMVLHPEKHIEKFVQSGADNITVHAEATYHLDALISKIKSFGKKASVALNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++E+V+ +DM+L+MTVNPG+GGQ+ I T+ KI L K + +EVDGG+
Sbjct: 122 YMIENVLGIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGLSFEIEVDGGINEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I V AGA+++V GS F+ + L KS
Sbjct: 182 TIVDCVNAGANVIVAGSYVFDSGDVSKSIEILRSKVKS 219
>gi|291392153|ref|XP_002712491.1| PREDICTED: ribulose-5-phosphate-3-epimerase-like [Oryctolagus
cuniculus]
Length = 228
Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+++V GS+ + S L +
Sbjct: 179 GPDTVHKCAEAGANMIVSGSAIMKSEDPRSVINLLRN 215
>gi|312143905|ref|YP_003995351.1| ribulose-phosphate 3-epimerase [Halanaerobium sp. 'sapolanicus']
gi|311904556|gb|ADQ14997.1| ribulose-phosphate 3-epimerase [Halanaerobium sp. 'sapolanicus']
Length = 218
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PS+L+ADFS+L EE+ ++ + A +HFDVMDG +VPNI+FG +I++LRS+SD
Sbjct: 2 KTEFAPSLLSADFSQLKEELKSVKE--ADYLHFDVMDGVYVPNITFGPTLIKALRSHSDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI+ + +I A+AG DI+T H E++ H+ R ++ I MG K G ++NP TP+
Sbjct: 60 PFDTHLMITKPERYIKEFAEAGSDILTVHVEATEHVHRVIQMIKEMGIKAGCSLNPATPL 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L+ ++ ++D ILIM+VNPGFGGQ I KI+ +I + + +EVDGG+ +
Sbjct: 120 EGLKYLLPDLDQILIMSVNPGFGGQAYIPQITEKIKSLSKIIKENNYDCKIEVDGGIKTH 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N+K++V AGAD++V GS+ F Q+ + + +
Sbjct: 180 NLKTIVDAGADIIVAGSAIFGQEEPAAALAEMRRIA 215
>gi|225021365|ref|ZP_03710557.1| hypothetical protein CORMATOL_01384 [Corynebacterium matruchotii
ATCC 33806]
gi|224945747|gb|EEG26956.1| hypothetical protein CORMATOL_01384 [Corynebacterium matruchotii
ATCC 33806]
Length = 218
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 121/219 (55%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I I PSIL+ADF+ LG +I + A A IH D+MDG FVPN+SFGAD+ + R
Sbjct: 1 MTTPI-ISPSILSADFTNLGADIQAV--ANADWIHVDIMDGHFVPNLSFGADITAAARRA 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + ++ AG D I FH E++ R I A G + G ++ P
Sbjct: 58 TTQPLDVHLMIDNPERWVDNYIKAGADHIIFHVEATDDPVSLARHIRAAGVQAGFSLRPG 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ +DE D++LIM+V PGFGGQ+ + + K+R + I R ++ +E+DGG+
Sbjct: 118 TPIEPYLPTLDEFDLVLIMSVEPGFGGQKFMPDQLDKVRALRHEITTRGLATLIEIDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ I ++G D V GS+ F + L L
Sbjct: 178 SADTIAQAAESGCDAFVAGSAIFTNGDPAAAVTNLRTLA 216
>gi|311272992|ref|XP_003133677.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Sus scrofa]
Length = 228
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 84/217 (38%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ + S L +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
>gi|191639662|ref|YP_001988828.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BL23]
gi|190713964|emb|CAQ67970.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BL23]
gi|327383773|gb|AEA55249.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei LC2W]
gi|327386966|gb|AEA58440.1| Ribulose-phosphate 3-epimerase [Lactobacillus casei BD-II]
Length = 219
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 86/218 (39%), Positives = 127/218 (58%), Gaps = 2/218 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+A+F+ L ++I I +G +H DVMDG FVPNI+FG ++ L +
Sbjct: 2 SIEIAPSILSANFANLMQDIDKIKDSGIHMLHVDVMDGHFVPNITFGPQMVSDLHKATSL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + D A+AG D+I H E+S HI L+ I G + G+ +NP TPV
Sbjct: 62 KLDCHLMIDNPDQFAPQFANAGGDMIMVHLEASAHIYGVLQEIKKAGAQAGLVLNPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
A ++++ +D +L+MTVNPGFGGQ+ I + K+++ L + ++EVDGG+
Sbjct: 122 AAAKELLPLVDQVLVMTVNPGFGGQKFIPQMVNKVQELAKLRDSLGLSFNIEVDGGINDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
IK AGA++ V GS F +S ++L K
Sbjct: 182 TIKDCAAAGANVFVAGSYVFGADNPVSRIEKLMSAAKQ 219
>gi|183982230|ref|YP_001850521.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium marinum M]
gi|183175556|gb|ACC40666.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium marinum M]
Length = 229
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 10/228 (4%)
Query: 1 MTPSI---QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M SI I PSIL+ADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL
Sbjct: 1 MPNSIGGPMIAPSILSADFARLADEAAAVR--GADWLHVDVMDGHFVPNLTLGLPVVESL 58
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ SD DCHLMI + D A+AG +TFH E++ + R I A G K G ++
Sbjct: 59 LAASDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGFSV 118
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVD 175
P TP+ +++ D +L+M+V PGFGGQ I + K+R + L+ + +I +E+D
Sbjct: 119 KPGTPLDPYLEILPHFDTLLVMSVEPGFGGQSFIPEVLSKVRTVRKLVDSGELTILIEID 178
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
GG+ + I+ +AG D V GS+ + + + + L++ A A+
Sbjct: 179 GGINADTIEQAAEAGVDCFVAGSAVYGAQDPAAAVEA---LRRQAGAV 223
>gi|126337888|ref|XP_001364658.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase [Monodelphis
domestica]
Length = 228
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLACLGAECTRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++ID+ L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDLALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ + S L +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
>gi|253997604|ref|YP_003049668.1| ribulose-phosphate 3-epimerase [Methylotenera mobilis JLW8]
gi|253984283|gb|ACT49141.1| ribulose-phosphate 3-epimerase [Methylotenera mobilis JLW8]
Length = 236
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 97/235 (41%), Positives = 146/235 (62%), Gaps = 12/235 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL+A+F++LG+EI ++ +G +HFDVMD +VPN++ G V ++R
Sbjct: 1 MDKTFRIAPSILSANFAKLGQEIEDVITSGTDIVHFDVMDNHYVPNLTIGPLVCDAIRET 60
Query: 61 SDSV---FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ V D HLM+ +D I A AG +IITFHPE+S HI RSL + +G K+G+
Sbjct: 61 AKKVGALIDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRSLAMVRDLGCKSGLVF 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSIS 171
NP T ++ L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K++ A+A I R I
Sbjct: 121 NPATSLSYLDHVMDKVDMILLMSVNPGFGGQKFIPETLEKLKLARARIDAYYEKTGRQIW 180
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLKKSALAI 223
LEVDGGV ++NI + +AGAD V GS+ F + Y + +++ S +
Sbjct: 181 LEVDGGVNAQNIAEIARAGADTFVAGSAIFGSPKDTDANRYNTVVAEMRASLATV 235
>gi|260063688|ref|YP_003196768.1| ribulose-phosphate 3-epimerase [Robiginitalea biformata HTCC2501]
gi|88783133|gb|EAR14306.1| ribulose-phosphate 3-epimerase [Robiginitalea biformata HTCC2501]
Length = 220
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 133/217 (61%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+LAADF L + + + ++ A H DVMDG FVPNIS+G VI+++ +
Sbjct: 1 MKHPI-IAPSLLAADFGNLQQAVEMVEQSQAGWHHIDVMDGLFVPNISYGMPVIQAIGKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D +I+ AD G +T H E+ H+ RSL+ I G K GVA+NP
Sbjct: 60 ASKPLDVHLMIVDPDRYIDTFADLGAATLTVHLEACTHLHRSLQRIRDAGMKAGVALNPH 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
+PV++L +V + D++L+M+VNPGFGGQ IE+T KI + + L+ +R+ +EVDGGV
Sbjct: 120 SPVSLLSEVAEMADLVLVMSVNPGFGGQSFIENTYRKIEELRKLLSERNSQALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
T N +LV AGAD+LV GS+ F RL
Sbjct: 180 TLENAHALVAAGADVLVAGSTVFRSDDPAGTIARLAA 216
>gi|332199994|gb|EGJ14068.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA47901]
Length = 218
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFVRAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRDEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ GA + V GS F +R+ L+K
Sbjct: 185 AQAKETGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|170749956|ref|YP_001756216.1| ribulose-phosphate 3-epimerase [Methylobacterium radiotolerans JCM
2831]
gi|170656478|gb|ACB25533.1| Ribulose-phosphate 3-epimerase [Methylobacterium radiotolerans JCM
2831]
Length = 228
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFS+L EE + AGA IH DVMDG FVPNI+FG V+++LR ++ FD
Sbjct: 6 IAPSILSADFSKLAEETRAVDAAGADWIHLDVMDGHFVPNITFGPPVVKALRPHTQKYFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A AG D IT H E+ PHI RSL+TI +GK+ GVAINP TP A++
Sbjct: 66 VHLMIAPADPYLAAFAQAGADGITVHAEAGPHIHRSLQTIRDLGKRAGVAINPGTPAAMV 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+MTVNPGFGGQ ++ + + + +A++ R I ++VDGG+ +K
Sbjct: 126 EPVLDLVDLVLVMTVNPGFGGQSFVKGAMESVARVRAMVAGRDIRIQVDGGIDPETVKVA 185
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGAD V G++ F G +YA+R+ +++ A
Sbjct: 186 SRAGADTFVAGNAVF-SGGPDAYAERIAAIREGA 218
>gi|224535873|ref|ZP_03676412.1| hypothetical protein BACCELL_00737 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522596|gb|EEF91701.1| hypothetical protein BACCELL_00737 [Bacteroides cellulosilyticus
DSM 14838]
Length = 216
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 128/218 (58%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ L +++ + ++ A +H DVMDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFAYLAKDLEMVNRSEADWVHIDVMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + IN + G + H E+ PH+ R ++ I G + V +NP
Sbjct: 59 SKKPLDVHLMIVQPEKFINEVKALGAHTMNVHFEACPHLHRVVQQIREAGMQPAVTLNPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+L+M+VNPGFGGQ+ IE T+ K+R+ +ALI +EVDGGV
Sbjct: 119 TPVAMLKDIIQDVYMVLLMSVNPGFGGQKFIEHTVEKVRELRALIDSTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD LV GS+ F L DL
Sbjct: 179 NLETGARLIAAGADALVAGSAVFAAPDPEGMIHSLKDL 216
>gi|258647994|ref|ZP_05735463.1| ribulose-phosphate 3-epimerase [Prevotella tannerae ATCC 51259]
gi|260851836|gb|EEX71705.1| ribulose-phosphate 3-epimerase [Prevotella tannerae ATCC 51259]
Length = 214
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+ADF L ++I+ + ++ A H DVMDG FVPNISFG V+ ++ +
Sbjct: 1 MIVSPSLLSADFGHLADDIAMLNRSEADWYHLDVMDGVFVPNISFGFPVMEAMAKLATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + +AD G I+ H E+ H+ R+++ I A G GV +NP TPV+
Sbjct: 61 LDVHLMIVQPEKFVTQVADLGAKIMNVHYEACTHLHRTVQQIKAAGMMAGVTLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+LED+I ++D++++M+VNPGFGGQ+ IE + K R+ K LI S +E+DGGV
Sbjct: 121 LLEDIIGDLDLVMLMSVNPGFGGQKFIEHAVEKTRRLKQLIQANGASTLIEIDGGVNRTT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K L AGAD+LV GS+ F + + L L
Sbjct: 181 GKLLADAGADVLVAGSAVFKAQDPEEEIRVLKHL 214
>gi|313149122|ref|ZP_07811315.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis 3_1_12]
gi|313137889|gb|EFR55249.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis 3_1_12]
Length = 216
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 129/218 (59%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ L +++ I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFAYLAKDLEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP
Sbjct: 59 TQKPLDVHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ + LI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRELIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD LV G++ F + + L
Sbjct: 179 NLETGARLVAAGADALVAGNAIFAAENPEETIHAMKGL 216
>gi|150008326|ref|YP_001303069.1| ribulose-phosphate 3-epimerase [Parabacteroides distasonis ATCC
8503]
gi|149936750|gb|ABR43447.1| ribulose-phosphate 3-epimerase [Parabacteroides distasonis ATCC
8503]
Length = 216
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+A+F L +E+ I K+ A +H D+MDG FVPNISFG V+ +L+ D
Sbjct: 5 IAPSLLSANFLDLRKEMGMINKSDADWLHLDIMDGVFVPNISFGFPVLNALKPICQKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI I +A G ++ H E+ H+ R++ I G K GV +NP TP+ +L
Sbjct: 65 VHLMIVEPQKFIPEVAATGAYMMNVHYEACSHLHRTVAAIKETGMKAGVTLNPHTPICLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+I ++DM+L+M+VNPGFGGQ+ IE ++ K+ + + +I ++ +S +EVDGGV K
Sbjct: 125 EDIIQDVDMVLLMSVNPGFGGQRFIEHSVDKVARLREMIDRKGLSTMIEVDGGVNLETGK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGA++LV G+ F I K L L
Sbjct: 185 RLVDAGANVLVAGNFVFKSPDPIQTIKDLKAL 216
>gi|222824027|ref|YP_002575601.1| D-ribulose-5-phosphate 3-epimerase [Campylobacter lari RM2100]
gi|222539249|gb|ACM64350.1| D-ribulose-5-phosphate 3-epimerase [Campylobacter lari RM2100]
Length = 215
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 79/212 (37%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F L EI ++ +AGA +H DVMDG FVPN++FG VI ++ +
Sbjct: 1 MYVAPSLLSANFLNLENEIKDVCEAGADLLHIDVMDGHFVPNLTFGPCVIENISKITSVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ S +++ I+FH E+ H R I G + +NP TPV+
Sbjct: 61 LDVHLMVHNVSSFVDLFIPIKPKFISFHIEAENHPIRVCEYIRKNGIHPAIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +++ +DM+L+M+VNPGFGGQ + KIRQ + +I ++++ +EVDGGV N
Sbjct: 121 SIEHILEFVDMVLLMSVNPGFGGQNFLPLVYDKIRQLREMIDRKNLKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L +AGAD+LV GS F+ + + + L
Sbjct: 181 APDLDEAGADILVAGSYIFSSQDKKTAINSLK 212
>gi|312876954|ref|ZP_07736929.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor lactoaceticus
6A]
gi|311796269|gb|EFR12623.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor lactoaceticus
6A]
Length = 221
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 93/218 (42%), Positives = 129/218 (59%), Gaps = 2/218 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DF+ L E+ + AGA +H DVMDG FV +I+ GA V+RSLR SD
Sbjct: 2 QIKIAPSILSSDFADLKSELKKLELAGADLVHIDVMDGNFVDSITIGAPVVRSLRKNSDL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TPV
Sbjct: 62 FFDVHLMVLHPEKHIEKFVQSGADNITVHAEATYHLDALISKIKSFGKKASVALNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
++E+V+ +DM+L+MTVNPG+GGQ+ I T+ KI L K +EVDGG+
Sbjct: 122 YMIENVLGIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGFSFEIEVDGGINEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I V AGA+++V GS F+ + L KS
Sbjct: 182 TIVDCVNAGANVIVAGSYVFDSGDVSKSIEILRSKVKS 219
>gi|153809817|ref|ZP_01962485.1| hypothetical protein RUMOBE_00198 [Ruminococcus obeum ATCC 29174]
gi|149833995|gb|EDM89075.1| hypothetical protein RUMOBE_00198 [Ruminococcus obeum ATCC 29174]
Length = 224
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 139/219 (63%), Gaps = 5/219 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PSIL+ADF+RLGE+I + KAG + +H DVMDG FVP+ISFG VIRS+R S
Sbjct: 2 EYRLCPSILSADFNRLGEQIQTLEKAGVEWLHIDVMDGDFVPSISFGMPVIRSIRKESKM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+S+ + +I D G D IT H E+ + R++ I G K GV+I P TPV
Sbjct: 62 FFDVHLMVSAPERYIQDFVDCGADSITVHAEACEDLERAIELIRDAGVKVGVSIKPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
+ +++++DM+LIMTV PGFGGQ+ + KI + K LI + + ++VDGG+
Sbjct: 122 NDISHLLEDVDMVLIMTVQPGFGGQKYLPECTEKIEELKELIDREELDVDIQVDGGINDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLK 217
++++++AGA+LLV GS FN S K+++ +K
Sbjct: 182 TMETVMKAGANLLVAGSYVFNGDLETNVYSIQKKMDKIK 220
>gi|227534883|ref|ZP_03964932.1| ribulose-phosphate 3-epimerase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187639|gb|EEI67706.1| ribulose-phosphate 3-epimerase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 221
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 130/217 (59%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L ++ + KAGA +H DVMDG FV N++FG V+++LR +
Sbjct: 6 MKIAPSILSADFAHLARDVEKVEKAGADLLHVDVMDGHFVSNLTFGPLVVQALRPVTSLP 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+S + + A+AG D I H E++ H+ L+ + G + GV INP TP++
Sbjct: 66 LEVHLMVSDPAAWVADFAEAGADTILVHEEATDHLYGVLQHVIEKGVRAGVVINPGTPLS 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
LE+V+ +D +L+MTVNPGFGGQ+ + + K+ + L R +EVDGG+ ++
Sbjct: 126 SLEEVLPLVDQVLVMTVNPGFGGQKFLTPMVDKVDRLYQLRKARKLHFDIEVDGGINNQT 185
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K+ AG D+ V GS F K +N L+++
Sbjct: 186 VKAAADAGTDIFVAGSYVFGSKNVGD---AMNSLREA 219
>gi|194335773|ref|YP_002017567.1| Ribulose-phosphate 3-epimerase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308250|gb|ACF42950.1| Ribulose-phosphate 3-epimerase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 221
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 91/217 (41%), Positives = 136/217 (62%), Gaps = 2/217 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
PS + PSIL+ADF+RL I TKAGA +H D+MDG FVPNI+FG +++++ S +
Sbjct: 3 APSTLLAPSILSADFTRLEHSIDIATKAGADWMHCDIMDGNFVPNITFGPLIVQAIASCT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLMI D I AG IT H E+ PH+ R+++ I ++G K GV+INP T
Sbjct: 63 PMIIDTHLMIVDPDRFIEEFIKAGSHQITVHQEACPHLHRTIQLIKSLGAKAGVSINPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
++ LE ++ ++D++L+M+VNPGFGGQ+ I S+I KIRQ + K + + +DGG+T
Sbjct: 123 SLSTLESILPDLDLVLLMSVNPGFGGQKFIPSSIGKIRQLHEMRLKVNPGMVIAIDGGIT 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N + +V AGAD L+ G++FF A + +
Sbjct: 183 EENGQEVVSAGADALIAGTAFFKAANPAQTAAKFRAM 219
>gi|313893384|ref|ZP_07826956.1| ribulose-phosphate 3-epimerase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442025|gb|EFR60445.1| ribulose-phosphate 3-epimerase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 216
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 139/214 (64%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EE+ +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFATLSEELQSIESAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEYAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK---ALIGKRSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I++ I K++QAK + + +EVDGG+
Sbjct: 122 VLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNTTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA +LV GS+ F + + + +
Sbjct: 182 TCVPIKRAGATVLVAGSAVFGAEDRAHMIEAIRN 215
>gi|312127899|ref|YP_003992773.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor hydrothermalis
108]
gi|311777918|gb|ADQ07404.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor hydrothermalis
108]
Length = 221
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DF+ L E+ + A A +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 2 QIKIAPSILSSDFADLKNELKKLELAKADLVHIDVMDGNFVDNITIGAPVVSSLRKNSTL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TPV
Sbjct: 62 FFDVHLMVLHPEKHIEKFVQSGADNITVHAEATYHLDALISKIKSFGKKASVALNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++E+V+ +DM+L+MTVNPG+GGQ+ I T+ KI L K + +EVDGG+
Sbjct: 122 YMIENVLGIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGLSFEIEVDGGINEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I V AGA+++V GS F+ + L
Sbjct: 182 TIVDCVNAGANVIVAGSYVFDSGDVSKSIEILRS 215
>gi|301773960|ref|XP_002922398.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Ailuropoda
melanoleuca]
gi|281354501|gb|EFB30085.1| hypothetical protein PANDA_011370 [Ailuropoda melanoleuca]
Length = 228
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECFRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTAVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ S L +
Sbjct: 179 GPDTIHRCAEAGANMIVSGSAIMRSDDPRSVINLLRN 215
>gi|85715582|ref|ZP_01046562.1| ribulose-phosphate 3-epimerase [Nitrobacter sp. Nb-311A]
gi|85697521|gb|EAQ35398.1| ribulose-phosphate 3-epimerase [Nitrobacter sp. Nb-311A]
Length = 233
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 105/216 (48%), Positives = 147/216 (68%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + + GA+ IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 8 RPLVIAPSILASDFSKLGEEVRAVDQGGAEWIHLDVMDGHFVPNISYGPDVIKAMRPHTK 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMI+ D ++ A AGCD IT H ES PH+ RSL+ I ++GKK GV +NP TP
Sbjct: 68 KIFDAHLMIAPCDPYLEAFAKAGCDHITVHVESGPHLHRSLQAIRSLGKKAGVTLNPATP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
++ LE V+D +D++L+M+VNPGFGGQ+ I S + KIR +++IG R I +EVDGGV
Sbjct: 128 LSTLEYVLDMVDLVLVMSVNPGFGGQKFISSAVGKIRDLRSMIGGRPIDIEVDGGVGPDV 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L AGA+ V GS+ F SY ++ ++
Sbjct: 188 AGDLAAAGANAFVAGSAVFKGGTMESYKANMDAIRN 223
>gi|302872117|ref|YP_003840753.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor obsidiansis
OB47]
gi|302574976|gb|ADL42767.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor obsidiansis
OB47]
Length = 221
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 126/214 (58%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL++DF+ L E+ + AGA +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 2 PIKIAPSILSSDFADLKSELKKLEVAGADLVHIDVMDGNFVDNITIGAPVVSSLRKNSKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + HI +G D IT H E++ H+ + I + GKK VA+NP TPV
Sbjct: 62 FFDVHLMVVHPEKHIERFVQSGADNITVHAEATYHLDAIINRIKSFGKKASVALNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++E+V+ +DM+LIMTVNPG+GGQ+ I T+ KI L K + +EVDGG+
Sbjct: 122 YMIENVLGIVDMVLIMTVNPGYGGQKFIPYTLKKIEILANLREKEGLSFEIEVDGGINEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I V AGA+++V GS F+ + L
Sbjct: 182 TIVDCVNAGANVIVAGSYVFDSGDVSKSIEILRS 215
>gi|300858537|ref|YP_003783520.1| ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
FRC41]
gi|300685991|gb|ADK28913.1| ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
FRC41]
gi|302206249|gb|ADL10591.1| Ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
C231]
gi|302330807|gb|ADL21001.1| Ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
1002]
gi|308276491|gb|ADO26390.1| Ribulose-phosphate 3-epimerase [Corynebacterium pseudotuberculosis
I19]
Length = 224
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 75/221 (33%), Positives = 123/221 (55%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADFS+LGEEI+ ++ A IH D+MDG FVPN+SFGAD+ ++ + +
Sbjct: 5 ARQPIIAPSILSADFSKLGEEIAEVSH--ADWIHVDIMDGHFVPNLSFGADITKAAHAST 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLMI + ++ DAG + FH E++ I + G + G ++ P T
Sbjct: 63 EQPLDVHLMIEEPEKWVDHYIDAGASCVIFHVEATSDPSALAHHIRSRGVRAGFSLRPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ + + D +L+M+V PGFGGQ+ + + K+R+ + I R++ +E+DGG++
Sbjct: 123 TIEPYLPQLSDFDQVLVMSVEPGFGGQKFMPDQLEKVRKLRQEIDSRNLDVIIEIDGGIS 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I +AG D V GS+ + K + L +L + A
Sbjct: 183 ADTIAQAAEAGCDAFVAGSAVYKHKDRNAAIDELRELAQRA 223
>gi|111658869|ref|ZP_01409490.1| hypothetical protein SpneT_02000040 [Streptococcus pneumoniae
TIGR4]
Length = 239
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 26 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 85
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP T V
Sbjct: 86 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVEA 145
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 146 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 206 AQAKEAGATVFVAGSYVFKGE----VNERVQTLRKQ 237
>gi|289669431|ref|ZP_06490506.1| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 223
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P++ I PSIL+ADF+RLGEE++N+ AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTV-IAPSILSADFARLGEEVNNVLNAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A+AG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFAEAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIEQMRAAVDAV 222
>gi|328957303|ref|YP_004374689.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. 17-4]
gi|328673627|gb|AEB29673.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. 17-4]
Length = 227
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 134/218 (61%), Gaps = 2/218 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+++ PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FGAD + ++R +
Sbjct: 10 KKMKLAPSILSADFANLARDIQLVEDGGADYIHVDVMDGHFVPNITFGADTVAAIRPVTK 69
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+ +++I A AG DIIT HPES+PHI R ++ I G K G+A+NP TP
Sbjct: 70 LPLDCHLMVEYPENYIKQFAAAGADIITVHPESTPHIHRVIQLIKDQGVKAGIAVNPGTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
+ + ++ ID++L+MTVNPG+GGQ I + KI++AK + + ++VDGG+
Sbjct: 130 IESMIHILGVIDLVLVMTVNPGYGGQSFIPEMLKKIKKAKEIKDREGYTYEIQVDGGIGE 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ K +AGA + V GS +N + ++ L D K
Sbjct: 190 QTAKQCKEAGATVFVAGSYIYNAEDPLNQMALLMDAVK 227
>gi|254446116|ref|ZP_05059592.1| ribulose-phosphate 3-epimerase [Verrucomicrobiae bacterium DG1235]
gi|198260424|gb|EDY84732.1| ribulose-phosphate 3-epimerase [Verrucomicrobiae bacterium DG1235]
Length = 218
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I + PS+LAAD +RL ++I + A +H D+MDG FVPN++FG + LR
Sbjct: 1 MGKPI-LAPSMLAADHTRLADDIKGVEAAECSWLHVDIMDGHFVPNLTFGPQTVADLRPK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM+ + + + AG D +T H E S I +L I +G K GV NP
Sbjct: 60 TELFLDVHLMLDNPQDFVELFIKAGADQVTIHVEPSYDISATLLKIRELGAKCGVVFNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP + ++ +D++D++L MTV PGFGGQ ES + K Q A +R++ ++VDGG+
Sbjct: 120 TPASAVQPYLDQVDIVLAMTVQPGFGGQSFQESVLEKTSQIAAWRQERNLDFRIQVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ N QAG D V G++FF K + + + L
Sbjct: 180 NAENAPLCRQAGVDTFVAGTAFFKSKDRNLFRQNIETL 217
>gi|74005311|ref|XP_536051.2| PREDICTED: similar to Ribulose-phosphate 3-epimerase
(Ribulose-5-phosphate-3-epimerase) (HUSSY-17) isoform 1
[Canis familiaris]
Length = 228
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 84/217 (38%), Positives = 120/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ S L +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMRSDDPRSVINLLRN 215
>gi|294793658|ref|ZP_06758795.1| ribulose-phosphate 3-epimerase [Veillonella sp. 3_1_44]
gi|294455228|gb|EFG23600.1| ribulose-phosphate 3-epimerase [Veillonella sp. 3_1_44]
Length = 216
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 142/214 (66%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EE+ +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFAVLSEELKSIEAAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I++ I K++QAK L+ + S +EVDGG+
Sbjct: 122 LLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNSTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA +LV GS+ F + S + + +
Sbjct: 182 TCVPIKRAGATVLVAGSAVFGAEDRASMIEFIRN 215
>gi|148356250|ref|NP_001091548.1| ribulose-phosphate 3-epimerase [Bos taurus]
gi|146186671|gb|AAI40632.1| RPE protein [Bos taurus]
Length = 228
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 84/217 (38%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLASLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATDNPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ + S L +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
>gi|118617419|ref|YP_905751.1| ribulose-phosphate 3-epimerase [Mycobacterium ulcerans Agy99]
gi|118569529|gb|ABL04280.1| ribulose-phosphate 3-epimerase Rpe [Mycobacterium ulcerans Agy99]
Length = 232
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 10/228 (4%)
Query: 1 MTPSI---QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M SI I PSIL+ADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL
Sbjct: 4 MPNSIGGPMIAPSILSADFARLADEAAAVR--GADWLHVDVMDGHFVPNLTLGLPVVESL 61
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ SD DCHLMI + D A+AG +TFH E++ + R I A G K G ++
Sbjct: 62 LAASDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGSSV 121
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVD 175
P TP+ +++ D +L+M+V PGFGGQ I + K+R + L+ + +I +E+D
Sbjct: 122 KPGTPLDPYLEILPHFDTLLVMSVEPGFGGQSFIPEVLSKVRTVRKLVDSGELTILIEID 181
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
GG+ + I+ +AG D V GS+ + + + + L++ A A+
Sbjct: 182 GGINADTIEQAAEAGVDCFVAGSAVYGAQDPAAAVEA---LRRQAGAV 226
>gi|297539747|ref|YP_003675516.1| ribulose-phosphate 3-epimerase [Methylotenera sp. 301]
gi|297259094|gb|ADI30939.1| ribulose-phosphate 3-epimerase [Methylotenera sp. 301]
Length = 235
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 96/235 (40%), Positives = 148/235 (62%), Gaps = 12/235 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL+A+F++LG+EI ++ +G +HFDVMD +VPN++ G V ++R
Sbjct: 1 MDKTFRIAPSILSANFAKLGQEIEDVITSGTDLVHFDVMDNHYVPNLTIGPLVCEAIREI 60
Query: 61 SD---SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
S ++ D HLM+ +D I A AG +IITFHPE+S HI RSL + +G K+G+
Sbjct: 61 SKNAGALIDVHLMVKPVDRIIPDFAKAGANIITFHPEASEHIDRSLAMVRDLGCKSGLVF 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSIS 171
NP T ++ L+ V+D++DMIL+M+VNPGFGGQ+ I T+ K++ A+A I R I
Sbjct: 121 NPATSLSYLDHVMDKVDMILLMSVNPGFGGQKFIPETLEKLKLARARIDAYYEKTGRQIW 180
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS---YAKRLNDLKKSALAI 223
LEVDGGV ++NI + +AGAD V GS+ F + + Y + +++ + +
Sbjct: 181 LEVDGGVNAQNIAEIARAGADTFVAGSAIFTKGNDADKNRYNTVVGEMRAALATV 235
>gi|302760795|ref|XP_002963820.1| hypothetical protein SELMODRAFT_166200 [Selaginella moellendorffii]
gi|300169088|gb|EFJ35691.1| hypothetical protein SELMODRAFT_166200 [Selaginella moellendorffii]
Length = 223
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 80/223 (35%), Positives = 131/223 (58%), Gaps = 5/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 2 SAKIAPSMLSSDFANLAAEAQRMLDCGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTSA 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ ++ +A AG TFH E+S + R + + G + GV + P TP
Sbjct: 62 YLDCHLMVTNPLDYVEPLAKAGASGFTFHIEASRDNWDRVSKKVKESGMRVGVCLKPGTP 121
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V + ++D ++D++LIMTV PGFGGQ+ + T+ K++ ++ S+ +EVDGG+
Sbjct: 122 VEEVFPLVDSGDVDLVLIMTVEPGFGGQKFMPETMSKVKALRSRY--PSLDIEVDGGLGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ AGA+ +V GSS F + + + ++A A
Sbjct: 180 STIQQAADAGANCIVAGSSVFGAPDPAAVISLMRNSVQTAQAA 222
>gi|237719190|ref|ZP_04549671.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_2_4]
gi|229451569|gb|EEO57360.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_2_4]
Length = 216
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 133/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + I + G + H E+ PH+ R ++ I G + V INP
Sbjct: 59 SQKPLDVHLMIVNPEKFIPEVKALGAHTMNVHYEACPHLYRVIQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G++ F + +L++L
Sbjct: 179 NLETGARLVEAGADALVAGNAVFAAPDPEAMISQLHEL 216
>gi|302779992|ref|XP_002971771.1| hypothetical protein SELMODRAFT_231837 [Selaginella moellendorffii]
gi|300160903|gb|EFJ27520.1| hypothetical protein SELMODRAFT_231837 [Selaginella moellendorffii]
Length = 223
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 2 SAKIAPSMLSSDFANLAAEAQRMLDCGADWLHMDIMDGHFVPNLTIGAPVIQSLRRHTSA 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ ++ +A AG TFH E+S + R + + G + GV + P TP
Sbjct: 62 YLDCHLMVTNPLDYVEPLAKAGASGFTFHIEASRDNWDRVSKKVKESGMRVGVCLKPGTP 121
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V + ++D ++D++LIMTV PGFGGQ+ I T+ K++ ++ S+ +EVDGG+
Sbjct: 122 VEEVFPLVDSGDVDLVLIMTVEPGFGGQKFIPETMSKVKALRSRY--PSLDIEVDGGLGP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ AGA+ +V GSS F + + + ++A A
Sbjct: 180 STIQQAADAGANCIVAGSSVFGAPDPAAVISLMRNSVQTAQAA 222
>gi|240172783|ref|ZP_04751442.1| ribulose-phosphate 3-epimerase [Mycobacterium kansasii ATCC 12478]
Length = 221
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 80/217 (36%), Positives = 124/217 (57%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + S
Sbjct: 1 MIAPSILAADFARLADEAAAV--HGADWLHVDVMDGHFVPNLTIGLPVVESLLAVSRIPM 58
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 59 DCHLMIENPDRWAPPYAEAGAHNVTFHAEAADNPVGVARDIRAAGAKAGISVKPGTPLDP 118
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+++ D +L+M+V PGFGGQ+ I + K+R + ++ + +I +E+DGGV + I
Sbjct: 119 YLEILPHFDTLLVMSVEPGFGGQKFIPEVLSKVRTVRKMVDSGELTILIEIDGGVNADTI 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG D V GS+ + + + L ++A
Sbjct: 179 EQAAEAGVDCFVAGSAVYGADNPATAVEALRQRARAA 215
>gi|15901806|ref|NP_346410.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae TIGR4]
gi|221232707|ref|YP_002511861.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae ATCC
700669]
gi|14973490|gb|AAK76050.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae TIGR4]
gi|220675169|emb|CAR69753.1| putative ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
ATCC 700669]
Length = 218
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP T V
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKGE----VNERVQTLRKQ 216
>gi|70726694|ref|YP_253608.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus
JCSC1435]
gi|68447418|dbj|BAE05002.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus
JCSC1435]
Length = 214
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF L EI + +A +HFDVMDG FVPNIS G ++ S+R+ +
Sbjct: 3 KIYPSLLSADFLNLENEIKALEEAQIDGLHFDVMDGQFVPNISIGIPILDSVRAATQLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +IN A+ G D+I+ H E++ HI R+L+ I GKK GV INP TPV
Sbjct: 63 DVHLMIEQPEQYINTFAEHGADMISVHVEATQHIHRALQMIKNAGKKAGVVINPGTPVES 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
L V++ +D +L+MTVNPGFGGQ IE+ K++ + L + ++EVDGG+ + I
Sbjct: 123 LLPVLEIVDYVLVMTVNPGFGGQSFIEACAAKVKILRDLRQSLNLNFNIEVDGGINNETI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K V GAD+ V GS FF Q+ + L
Sbjct: 183 KICVDNGADMFVTGSYFFKQEDYGKVTQLLK 213
>gi|167746126|ref|ZP_02418253.1| hypothetical protein ANACAC_00822 [Anaerostipes caccae DSM 14662]
gi|317473316|ref|ZP_07932611.1| ribulose-phosphate 3-epimerase [Anaerostipes sp. 3_2_56FAA]
gi|167654641|gb|EDR98770.1| hypothetical protein ANACAC_00822 [Anaerostipes caccae DSM 14662]
gi|316899152|gb|EFV21171.1| ribulose-phosphate 3-epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 218
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 138/218 (63%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PSIL+ADF LG++I AGA+ +H DVMDG FVPNISFG VI+S+RS +D
Sbjct: 2 EYILSPSILSADFKTLGDDIKKADAAGAQWVHIDVMDGDFVPNISFGMPVIKSIRSATDK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLM+ I+ A G D IT H E+ H+ R ++ I G K GV++NP T +
Sbjct: 62 VFDVHLMVEEPGRFIDEFAACGADYITVHAEACTHLGRVIQQIKQKGCKVGVSLNPATSL 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++L+ V+D++DM+LIM+VNPGFGGQ IE+ KIR + +I R + ++VDGGVT+
Sbjct: 122 SVLDYVLDDLDMVLIMSVNPGFGGQSYIEAMDQKIRDLRKMITDRGLDVDIQVDGGVTAD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI + GA++ V GS+ FN + + +L K+
Sbjct: 182 NIAHIKDCGANVFVAGSAVFNG----DIEQNIKNLFKA 215
>gi|313674603|ref|YP_004052599.1| ribulose-phosphate 3-epimerase [Marivirga tractuosa DSM 4126]
gi|312941301|gb|ADR20491.1| ribulose-phosphate 3-epimerase [Marivirga tractuosa DSM 4126]
Length = 218
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF+ L ++ + ++ A IH D+MDG FVPNISFG V ++ ++ D
Sbjct: 5 IAPSVLAADFANLQRDVEMLNESQADYIHVDIMDGIFVPNISFGLPVCEAIYKHAKKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++I DAG I+ H E+SPH+ R+L+ I +G + GVAINP T V++L
Sbjct: 65 VHLMIEKPENYIQAFHDAGAATISVHYEASPHLHRTLQAIRDLGLRAGVAINPHTNVSLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+VI D++ +M+VNPGFGGQ+ IE T K+RQ K LI ++ S +E+DGGV N
Sbjct: 125 ENVIQNTDLVCMMSVNPGFGGQKFIEQTYAKVRQLKELIADQNASTLIEIDGGVNIDNAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
L++AGAD+LV G+ F + I + L D
Sbjct: 185 KLLEAGADVLVAGNFVFKSENPIHTIQELKD 215
>gi|261378741|ref|ZP_05983314.1| ribulose-phosphate 3-epimerase [Neisseria cinerea ATCC 14685]
gi|269144896|gb|EEZ71314.1| ribulose-phosphate 3-epimerase [Neisseria cinerea ATCC 14685]
Length = 227
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 151/227 (66%), Gaps = 8/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-TYRIAPSILSADFARLGEEVANVISAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ACVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIRQ +A++ + R I++EV
Sbjct: 120 TPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQVRAMLDRYEAQSGRHIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
DGG+ + NI ++ AGAD V GS+ F + + + +L K+A
Sbjct: 180 DGGIKTDNIAAVAAAGADTFVAGSAIFGKPDYKAVIDAMRVELAKAA 226
>gi|253681464|ref|ZP_04862261.1| ribulose-phosphate 3-epimerase [Clostridium botulinum D str. 1873]
gi|253561176|gb|EES90628.1| ribulose-phosphate 3-epimerase [Clostridium botulinum D str. 1873]
Length = 216
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 101/216 (46%), Positives = 141/216 (65%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFSRLGE+I ++ K GA IH DVMDG FVPNISFG +I+S+R+ +
Sbjct: 2 VKLAPSILSADFSRLGEDIKSLDKYGADMIHIDVMDGMFVPNISFGIPIIKSIRNITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I +G DIIT H E+ H+ R++ I + G K GVAINP T +
Sbjct: 62 FDVHLMIKEPSRYIEDFVKSGADIITVHYEADKHLDRTVNYIKSFGVKAGVAINPATSIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I DMILIM+VNPGFGGQ+ I KIR+ KAL K +++ ++VDGGV N
Sbjct: 122 SIKHIIPIADMILIMSVNPGFGGQKYINYCSEKIREVKALSEKFNKNLLIQVDGGVGINN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V+ GA+++V GS+ F K + +LK+
Sbjct: 182 IKHVVECGANVIVAGSAVFKNG---EIKKNIEELKE 214
>gi|75676403|ref|YP_318824.1| ribulose-phosphate 3-epimerase [Nitrobacter winogradskyi Nb-255]
gi|74421273|gb|ABA05472.1| ribulose-5-phosphate 3-epimerase [Nitrobacter winogradskyi Nb-255]
Length = 233
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 105/216 (48%), Positives = 146/216 (67%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LG+E+ + + GA+ IH DVMDG FVPNIS+G DVI+++R +S
Sbjct: 8 RPLVIAPSILASDFSKLGDEVRAVDQGGAEWIHLDVMDGHFVPNISYGPDVIKAMRPHSK 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMIS D ++ A AGCD IT H E+ PH+ RSL+ I +GKK GV +NP TP
Sbjct: 68 KIFDAHLMISPCDPYLEAFAKAGCDHITVHVEAGPHLHRSLQAIRNLGKKAGVTLNPGTP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
++ +E V+D +D++L+M+VNPGFGGQ+ I S + KIR +A+IG R I +EVDGGV
Sbjct: 128 LSTVEYVLDMVDLVLVMSVNPGFGGQKFISSAVDKIRDLRAMIGGRPIDIEVDGGVGPDV 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L AGA+ V GS+ F SY ++ ++
Sbjct: 188 AGDLAAAGANAFVAGSAVFKGGTMESYKANMDAIRN 223
>gi|269797916|ref|YP_003311816.1| ribulose-phosphate 3-epimerase [Veillonella parvula DSM 2008]
gi|269094545|gb|ACZ24536.1| ribulose-phosphate 3-epimerase [Veillonella parvula DSM 2008]
Length = 216
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 142/214 (66%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EE+ +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFAVLSEELKSIEAAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I++ I K++QAK L+ + S +EVDGG+
Sbjct: 122 LLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNSTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA +LV GS+ F + S + + +
Sbjct: 182 TCVPIKRAGATVLVAGSAVFGVEDRASMIESIRN 215
>gi|289663842|ref|ZP_06485423.1| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 223
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P++ I PSIL+ADF+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTV-IAPSILSADFARLGEEVDNVLNAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A+AG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFAEAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIEQMRAAVDAV 222
>gi|266624059|ref|ZP_06116994.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
gi|288864115|gb|EFC96413.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
Length = 220
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 137/217 (63%), Gaps = 2/217 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ PSIL ADF L +++ AGA+ IH DVMDG FVP+ISFG VI SLRS +D V
Sbjct: 3 FLLAPSILGADFKHLEQQVCEAADAGAQYIHLDVMDGDFVPSISFGMPVISSLRSCTDKV 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ +I+ + +AG DII+ H E+ H+ R++ I G K GV +NP TP+
Sbjct: 63 FDVHMMVREPGRYIDAMKEAGADIISVHVEACTHLDRTVNQIKEAGIKAGVVLNPATPID 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L+ ++D++DM+L+MTVNPGFGGQ+ I T+ KIR + R + ++VDGGVT N
Sbjct: 123 VLDCILDQVDMVLLMTVNPGFGGQKFIPYTLEKIRALRKKCDMRGLSTDIQVDGGVTCDN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++ L++AGA++ V GS+ F + L ++
Sbjct: 183 VRDLMEAGANIFVAGSAIFKGDVTANTKAFLKIFEEQ 219
>gi|238019370|ref|ZP_04599796.1| hypothetical protein VEIDISOL_01234 [Veillonella dispar ATCC 17748]
gi|237864069|gb|EEP65359.1| hypothetical protein VEIDISOL_01234 [Veillonella dispar ATCC 17748]
Length = 216
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 138/214 (64%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EEI +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFATLSEEIKSIELAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTQLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GV++NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVSLNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I + I K++QAK L+ + + +EVDGG+
Sbjct: 122 LLEDVAADLDMILIMSVNPGFGGQSFIPNAIKKVKQAKMLLEEVDNTTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA +LV GS+ F + +
Sbjct: 182 TCVPIKRAGATILVAGSAVFGADDRAQMIAAIRN 215
>gi|222529039|ref|YP_002572921.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor bescii DSM
6725]
gi|222455886|gb|ACM60148.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor bescii DSM
6725]
Length = 221
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+++F+ L E+ + A A +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 2 QIKIAPSILSSNFADLKNELKKLELAKADLVHIDVMDGNFVDNITIGAPVVSSLRKNSTL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + HI +G D IT H E + H+ + I + GKK VA+NP TPV
Sbjct: 62 FFDVHLMVLHPEKHIEKFVQSGADNITVHAEVTYHLDALISKIKSFGKKASVALNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++E+V++ +DM+L+MTVNPG+GGQ+ I T+ KI L K + +EVDGG+
Sbjct: 122 YMIENVLEIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGLSFEIEVDGGINEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I V AGA+++V GS F+ + L
Sbjct: 182 TIIDCVNAGANVIVAGSYVFDSGDVSKSIEVLRS 215
>gi|170755632|ref|YP_001782045.1| ribulose-phosphate 3-epimerase [Clostridium botulinum B1 str. Okra]
gi|169120844|gb|ACA44680.1| ribulose-phosphate 3-epimerase [Clostridium botulinum B1 str. Okra]
Length = 216
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 105/213 (49%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E+ HI R++ I ++G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ KAL K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIKYASEKIKEVKALSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + GADLLV GS+ F K L +
Sbjct: 182 IKKIADCGADLLVAGSAVFKNGEIEKNIKVLRE 214
>gi|221632631|ref|YP_002521852.1| ribulose-phosphate 3-epimerase [Thermomicrobium roseum DSM 5159]
gi|221155383|gb|ACM04510.1| ribulose-phosphate 3-epimerase [Thermomicrobium roseum DSM 5159]
Length = 235
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 137/217 (63%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL ADF L + + +AGA IH D+MDG FVPNISFG ++R++R +
Sbjct: 11 MLSPSILNADFGHLAAVVRELDEAGADAIHLDIMDGRFVPNISFGLPIVRAVRDATTLPL 70
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ A AG +T H E+ PH+ R+++ IH +G GVA+NP TP+A
Sbjct: 71 DVHLMIVEPERYLEAFAQAGASALTVHVETCPHLHRTIQAIHELGLLAGVALNPATPLAA 130
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+E+++ +D++LIMTV+PGFGGQ LI + + K+R+ + ++ +R L VDGGV N+
Sbjct: 131 IEEILPFVDLVLIMTVDPGFGGQGLIPAVLGKLRRLRQMVDERGFRCLLSVDGGVKLSNL 190
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+S++ AGAD++V GS F + + L L++ A
Sbjct: 191 ESVISAGADIVVTGSVLFTAEERP--GEILRRLRERA 225
>gi|168492042|ref|ZP_02716185.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC0288-04]
gi|168494776|ref|ZP_02718919.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC3059-06]
gi|225855472|ref|YP_002736984.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae JJA]
gi|307128181|ref|YP_003880212.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae 670-6B]
gi|183573710|gb|EDT94238.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC0288-04]
gi|183575338|gb|EDT95866.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC3059-06]
gi|225722509|gb|ACO18362.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae JJA]
gi|306485243|gb|ADM92112.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae 670-6B]
Length = 218
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP T V
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|325927749|ref|ZP_08188977.1| ribulose-5-phosphate 3-epimerase [Xanthomonas perforans 91-118]
gi|78034488|emb|CAJ22133.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325541950|gb|EGD13464.1| ribulose-5-phosphate 3-epimerase [Xanthomonas perforans 91-118]
Length = 233
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 11 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRRKIDATGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVDAV 232
>gi|153939835|ref|YP_001391798.1| ribulose-phosphate 3-epimerase [Clostridium botulinum F str.
Langeland]
gi|152935731|gb|ABS41229.1| ribulose-phosphate 3-epimerase [Clostridium botulinum F str.
Langeland]
gi|295319824|gb|ADG00202.1| ribulose-phosphate 3-epimerase [Clostridium botulinum F str.
230613]
Length = 216
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 105/213 (49%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E+ HI R++ I ++G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ KAL K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIKYASEKIKEVKALSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + GADLLV GS+ F K L +
Sbjct: 182 IKEIADCGADLLVAGSAVFKNGEIEKNIKVLRE 214
>gi|320538334|ref|ZP_08038215.1| ribulose-phosphate 3-epimerase [Treponema phagedenis F0421]
gi|320144833|gb|EFW36568.1| ribulose-phosphate 3-epimerase [Treponema phagedenis F0421]
Length = 209
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 90/206 (43%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S + PS+L+ADFS+LG E+ I + G K IH DVMDG FVPN+SFGA V++SL+
Sbjct: 1 MRKSFLLAPSLLSADFSKLGSELIYIEENGGKLIHVDVMDGHFVPNLSFGAPVLKSLKGK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD H M+++ + A+AG + TFH E++ H R + I G K G+++ P
Sbjct: 61 TSLPFDVHFMVTNPSDFVKDFAEAGAEYFTFHIEAAVHAHRLIGLIREYGMKPGISLVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGV 178
TPV++L++V+ D++L+M+VNPGFGGQ++I I KIRQ K + ++ S + VDGG+
Sbjct: 121 TPVSVLQEVLPFADLVLVMSVNPGFGGQKMIPECIEKIRQLKKIREEKKLSYLISVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
S+ + +AGAD++V GSSFF+ +
Sbjct: 181 NSQTLPVAAEAGADIIVSGSSFFSGE 206
>gi|168182579|ref|ZP_02617243.1| ribulose-phosphate 3-epimerase [Clostridium botulinum Bf]
gi|237795941|ref|YP_002863493.1| ribulose-phosphate 3-epimerase [Clostridium botulinum Ba4 str. 657]
gi|182674260|gb|EDT86221.1| ribulose-phosphate 3-epimerase [Clostridium botulinum Bf]
gi|229264167|gb|ACQ55200.1| ribulose-phosphate 3-epimerase [Clostridium botulinum Ba4 str. 657]
Length = 216
Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats.
Identities = 105/213 (49%), Positives = 142/213 (66%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A AG DII+ H E+ HI R++ I ++G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFAKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ KAL K + + +EVDGG+T N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKALSEKNNKDLIIEVDGGITKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + GADLLV GS+ F K L +
Sbjct: 182 IKEIANCGADLLVAGSAVFKNGEIEKNIKVLRE 214
>gi|311894787|dbj|BAJ27195.1| putative ribulose-phosphate 3-epimerase [Kitasatospora setae
KM-6054]
Length = 227
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 122/212 (57%), Gaps = 4/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G ++ SL + +
Sbjct: 3 QINPSILSADFARLADEAEAVR--GADWLHVDVMDNHFVPNLTLGVPIVESLARATGTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEQPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALRPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV I
Sbjct: 121 YEDLLPELDMVLIMTVEPGFGGQAFLDIMLPKIRRTRQLIDKHGLDLWLQVDGGVAPATI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGAD+ V GS+ + + L
Sbjct: 181 DACAEAGADVFVAGSAVYGAADPAEAVRALRA 212
>gi|27532955|ref|NP_079959.2| ribulose-phosphate 3-epimerase [Mus musculus]
gi|34924979|sp|Q8VEE0|RPE_MOUSE RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Ribulose-5-phosphate-epimerase
gi|17512311|gb|AAH19126.1| Ribulose-5-phosphate-3-epimerase [Mus musculus]
gi|26353090|dbj|BAC40175.1| unnamed protein product [Mus musculus]
gi|26383424|dbj|BAB30922.2| unnamed protein product [Mus musculus]
gi|148667818|gb|EDL00235.1| ribulose-5-phosphate-3-epimerase, isoform CRA_a [Mus musculus]
gi|149016015|gb|EDL75296.1| similar to Ribulose-5-phosphate-3-epimerase, isoform CRA_b [Rattus
norvegicus]
gi|187465999|emb|CAQ52185.1| ribulose-5-phosphate-3-epimerase [Mus musculus]
Length = 228
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + ++ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PTLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ +AGA+++V GS+ + L +
Sbjct: 179 GPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRN 215
>gi|299148263|ref|ZP_07041325.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_23]
gi|298513024|gb|EFI36911.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_1_23]
Length = 216
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 133/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++I + ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFGYLAKDIEMVNRSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + I + G + H E+ PH+ R ++ I G + V INP
Sbjct: 59 SKKPLDVHLMIVNPEKFILEVKALGAHTMNVHYEACPHLHRVIQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+R+ +ALI + +EVDGGV
Sbjct: 119 TPVALLQDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVRELRALIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGA+ LV G++ F + +L++L
Sbjct: 179 NLETGARLVEAGANALVAGNAVFAAPDPEAMISQLHEL 216
>gi|145220242|ref|YP_001130951.1| ribulose-5-phosphate 3-epimerase [Prosthecochloris vibrioformis DSM
265]
gi|145206406|gb|ABP37449.1| ribulose-5-phosphate 3-epimerase [Chlorobium phaeovibrioides DSM
265]
Length = 221
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 89/203 (43%), Positives = 131/203 (64%), Gaps = 2/203 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S I PSIL+AD +RLG+ + AGA IH D+MDG FVPNI+FG V+ ++ +
Sbjct: 3 EQSTLIAPSILSADLTRLGQSLKIAEDAGADWIHCDIMDGNFVPNITFGPIVVDAIAKNT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLMI+ D +I AG IT H E+ PH+ R+++ I ++G K GV++NP T
Sbjct: 63 PLVIDTHLMIADPDRYIEAFVKAGSHQITVHQETCPHLHRTIQFIKSLGAKAGVSLNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P++ LE ++ ++D++LIM+VNPGFGGQ+ I S++ KIR + R+ + VDGG+T
Sbjct: 123 PISTLESILPDLDLVLIMSVNPGFGGQKFIPSSVEKIRLLHQMRTLRNPDMVIAVDGGIT 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFN 202
N + +V AGAD L+ G++FF
Sbjct: 183 EENAQEVVSAGADALIAGTAFFR 205
>gi|282850145|ref|ZP_06259524.1| ribulose-phosphate 3-epimerase [Veillonella parvula ATCC 17745]
gi|294791797|ref|ZP_06756945.1| ribulose-phosphate 3-epimerase [Veillonella sp. 6_1_27]
gi|282579638|gb|EFB85042.1| ribulose-phosphate 3-epimerase [Veillonella parvula ATCC 17745]
gi|294457027|gb|EFG25389.1| ribulose-phosphate 3-epimerase [Veillonella sp. 6_1_27]
Length = 216
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 141/214 (65%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+A+F+ L EE+ +I AGA +H D+MDG FVPN++FGA +++++R Y+
Sbjct: 2 IKIAPSMLSANFAVLSEELKSIEAAGADLLHIDIMDGHFVPNLTFGAPIVKAIRPYTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+++ ++ A G + TFH E+ PH+ R ++ I G K GVA+NP TPV+
Sbjct: 62 FDVHLMVTNPGDYVEEFAKIGVEYFTFHQETVPHMHRLIQHIKQCGMKAGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+LEDV ++DMILIM+VNPGFGGQ I++ I K++QAK L+ + S +EVDGG+
Sbjct: 122 LLEDVAADLDMILIMSVNPGFGGQSFIKNAIKKVKQAKILLEEVDNSTAVIEVDGGINDI 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA +LV GS+ F + S + +
Sbjct: 182 TCVPIKRAGATVLVAGSAVFGAENRASMIDSIRN 215
>gi|162138543|ref|YP_362233.2| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 223
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRRKIDATGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVDAV 222
>gi|255531753|ref|YP_003092125.1| ribulose-phosphate 3-epimerase [Pedobacter heparinus DSM 2366]
gi|255344737|gb|ACU04063.1| ribulose-phosphate 3-epimerase [Pedobacter heparinus DSM 2366]
Length = 224
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 136/212 (64%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+ L +I I + A H D+MDG FVPNISFG V+ +++ Y++ D
Sbjct: 5 IAPSVLSADFANLQRDIEMINASAADWFHVDIMDGVFVPNISFGFPVMEAIKRYAEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I A AG +IT H E+ H+ R+++ IHA G + GVA+NP TPV++L
Sbjct: 65 VHLMIVNPDQYIERFAAAGAAMITVHYEACTHLHRTVQAIHATGCRAGVALNPHTPVSML 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+D++ ++DM+LIM+VNPGFGGQQ I +++ KI + + + + +EVDGGV N
Sbjct: 125 KDLLTDLDMVLIMSVNPGFGGQQFIPNSLNKIAELRKMASAVNPDLLIEVDGGVGLHNTA 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+L+QAGAD+LV G++ F L +
Sbjct: 185 ALLQAGADVLVAGNAIFAAASPAGMIAELKQI 216
>gi|74211763|dbj|BAE29233.1| unnamed protein product [Mus musculus]
Length = 228
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + ++ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PTLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ +AGA+++V GS+ + L +
Sbjct: 179 GPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRN 215
>gi|116628485|ref|YP_821104.1| ribulose-phosphate 3-epimerase [Streptococcus thermophilus LMD-9]
gi|116101762|gb|ABJ66908.1| ribulose-5-phosphate 3-epimerase [Streptococcus thermophilus LMD-9]
Length = 219
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 134/214 (62%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ I +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 2 SYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H E++ HI +++ I A G K GV INP TPV
Sbjct: 62 VFDCHLMVVDPERYVTAYAQAGADIMTIHVEATKHIHGAIQKIKAAGMKAGVVINPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L V+ +D +LIMTVNPGFGGQ I + K+ Q L K S +EVDGGV ++
Sbjct: 122 EALIPVLALVDQVLIMTVNPGFGGQTFIPEMMSKVEQVVELRQKGGYSFDIEVDGGVDNK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 182 TIAACAKAGANVFVAGSYLFKNHDLTAQVQTLRD 215
>gi|149909438|ref|ZP_01898093.1| ribulose-phosphate 3-epimerase [Moritella sp. PE36]
gi|149807548|gb|EDM67497.1| ribulose-phosphate 3-epimerase [Moritella sp. PE36]
Length = 224
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 142/219 (64%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+A+F+ LG+E+ + AGA IHFDVMD +VPN++ G + ++LR +
Sbjct: 1 MKNFLIAPSILSANFASLGQEVDAVLAAGADVIHFDVMDNHYVPNLTIGPMICKALRDHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D IN A AG +ITFH E+S H+ RSL+ I G K G+ NP
Sbjct: 61 VTAPIDVHLMVRPVDHMINEFAKAGASMITFHAEASDHVDRSLQLIKEHGLKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ L+ V+D++DMIL+M+VNPGFGGQ I ST+ K+R + LI R I LE+DGGV
Sbjct: 121 TPLHHLDYVMDKLDMILLMSVNPGFGGQSFIPSTLQKLRDVRQLIDASGRDIILEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI+ + +AGAD+ V GS+ + Q+ Y K +++++
Sbjct: 181 KVDNIREIAEAGADMFVAGSAIYGQED---YKKVIDEMR 216
>gi|313206168|ref|YP_004045345.1| ribulose-phosphate 3-epimerase [Riemerella anatipestifer DSM 15868]
gi|312445484|gb|ADQ81839.1| ribulose-phosphate 3-epimerase [Riemerella anatipestifer DSM 15868]
gi|315023148|gb|EFT36161.1| Ribulose-phosphate 3-epimerase [Riemerella anatipestifer RA-YM]
gi|325336387|gb|ADZ12661.1| Pentose-5-phosphate-3-epimerase [Riemerella anatipestifer RA-GD]
Length = 216
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ADF L +I + ++ A H DVMDG FVPNISFG ++++++ +
Sbjct: 1 MKTKL-IAPSLLSADFGNLQRDIEMLNRSQADWFHVDVMDGRFVPNISFGFPIMKTIKEH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + ++ D G D+++ H E+ H+ R+++ I + G K GV +NP
Sbjct: 60 ARKFVDVHLMIVEPEKYVEEFIDNGADLVSVHYEACTHLHRTIKLIQSKGAKAGVVLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++LED+I EID++L+M+VNPGFGGQ+ IE+T KI+Q K LI ++ + +++DGGV
Sbjct: 120 TPVSVLEDIIGEIDLVLLMSVNPGFGGQKFIENTYKKIKQTKDLILDQNATALIQIDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ N L + GAD+LV G++ F+ + S + L
Sbjct: 180 NTDNASKLFEVGADVLVAGNAVFSAENPESVIELLKS 216
>gi|295094729|emb|CBK83820.1| ribulose-phosphate 3-epimerase [Coprococcus sp. ART55/1]
Length = 220
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PS+L+ DF+ + I+ + +A +H DVMDG FVPNISFGA VI+ LR ++ +
Sbjct: 2 IILSPSLLSVDFAHIAYGIAELDRAKVPALHLDVMDGAFVPNISFGAPVIKCLRKETNMI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D ++ AG D +T H ES H+ R++ IH +G K GVA+NP TPV+
Sbjct: 62 FDVHLMIEEPDRYLEDFKKAGADWVTVHAESCKHLHRTVARIHELGMKAGVALNPATPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+L+ VID++DM+L+M+VNPGFGGQ I S + K+ + + + R +++EVDGGV +N
Sbjct: 122 VLDYVIDDLDMVLVMSVNPGFGGQSFIPSALRKVAEVRKMADDRGLELNIEVDGGVNLKN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +++AGA+++V GS+ F + + L +K
Sbjct: 182 VGDVIEAGANVIVAGSAVFGGDAYENSSSFLKVFEK 217
>gi|319892218|ref|YP_004149093.1| Ribulose-phosphate 3-epimerase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161914|gb|ADV05457.1| Ribulose-phosphate 3-epimerase [Staphylococcus pseudintermedius
HKU10-03]
gi|323464685|gb|ADX76838.1| ribulose-phosphate 3-epimerase [Staphylococcus pseudintermedius
ED99]
Length = 216
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ADF L +E++ + ++G +HFDVMDG FVPNIS G V+ ++R+ +D
Sbjct: 3 KVFPSLLSADFLNLKQELTKLEESGIDALHFDVMDGQFVPNISIGFPVLEAIRAATDLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + ++ A+ G + I+ H E +PHI R ++ I G + GV INP TPV
Sbjct: 63 DAHLMIETPNDYVEAFAEKGVNKISVHMEGNPHIHRVVQNIKKHGVEAGVVINPGTPVHA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ +I+E+D +L+M+VNPGFGGQ + + + KI+Q + R +EVDGG+ +
Sbjct: 123 LDAIIEEVDFVLVMSVNPGFGGQAFLPAAVDKIKQLDDIRKNRQLDFKIEVDGGINDQTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K +++AGAD LV GS FF++ +RL
Sbjct: 183 KQVIEAGADWLVAGSYFFSRADYKEANQRLK 213
>gi|306820534|ref|ZP_07454167.1| ribulose-phosphate 3-epimerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551448|gb|EFM39406.1| ribulose-phosphate 3-epimerase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 217
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKA-GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADFS +G +I + K +H DVMDG FVPNIS G I+S+R S+ +F
Sbjct: 4 IAPSILSADFSNIGRDIKEVEDNTNCKYLHIDVMDGMFVPNISIGQVFIKSIRKASNMIF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ +G DI+T H E++ H+ R L I G K GV +NP TP+
Sbjct: 64 DVHLMIERPERYVEDFQKSGADILTVHCEATNHLHRVLAHIRQCGMKAGVTLNPATPIEN 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ V+D +D++L+M+VNPGFGGQ I +++ KI + K + + +E+DGGV I
Sbjct: 124 IIPVLDMVDLVLVMSVNPGFGGQSFIRNSLTKIEKLKKWKEEYGYNYIIEIDGGVNESTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGA+L V GS+ FN KG + L L
Sbjct: 184 SEISKAGAELFVAGSAVFNNKGIRQNIENLEKL 216
>gi|28210915|ref|NP_781859.1| ribulose-phosphate 3-epimerase [Clostridium tetani E88]
gi|28203354|gb|AAO35796.1| ribulose-phosphate 3-epimerase [Clostridium tetani E88]
Length = 217
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ LG +I I K GA +HFDVMDG +VPNISFG +++S++ +
Sbjct: 2 VKIAPSILSADFANLGRDIEAIEKYGAHVVHFDVMDGKYVPNISFGVPIMKSIKGLTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A AG DIITFH E+ H+ R++ I + G K G+A+NP TPV+
Sbjct: 62 FDVHLMIEEPSKYIEDFAKAGADIITFHYEAETHLDRTINYIKSFGVKAGIALNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++D+I +DM+LIM+VNPGFGGQ+ I KIR+ K L + + + +EVDGGV N
Sbjct: 122 LIKDLIPSLDMVLIMSVNPGFGGQKYIYYASDKIRELKKLKDELNKDLIIEVDGGVGKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + G DL+V GS+ F K L +
Sbjct: 182 IKDIANCGVDLVVAGSAVFKDGKIEENLKVLRE 214
>gi|312622705|ref|YP_004024318.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor kronotskyensis
2002]
gi|312203172|gb|ADQ46499.1| ribulose-phosphate 3-epimerase [Caldicellulosiruptor kronotskyensis
2002]
Length = 221
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+++F+ L E+ + A A +H DVMDG FV NI+ GA V+ SLR S
Sbjct: 2 QIKIAPSILSSNFADLKNELKKLELAKADLVHIDVMDGNFVDNITIGAPVVSSLRKNSTL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + HI +G D IT H E + H+ + I + GKK VA+NP TPV
Sbjct: 62 FFDVHLMVLHPEKHIEKFVQSGADNITVHAEVTYHLDALISKIKSFGKKASVALNPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++E+V++ +DM+L+MTVNPG+GGQ+ I T+ KI L K + +EVDGG+
Sbjct: 122 YMIENVLEIVDMVLVMTVNPGYGGQKFIPYTLKKIEMLANLREKEGLSFEIEVDGGINEE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I V AGA+++V GS F+ + L
Sbjct: 182 TIVDCVNAGANVIVAGSYVFDSGDVSKSIQVLRS 215
>gi|15895007|ref|NP_348356.1| ribulose-phosphate 3-epimerase [Clostridium acetobutylicum ATCC
824]
gi|15024697|gb|AAK79696.1|AE007682_6 Pentose-5-phosphate-3-epimerase, YLOR B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|325509144|gb|ADZ20780.1| ribulose-phosphate 3-epimerase [Clostridium acetobutylicum EA 2018]
Length = 216
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ SIL+ADFS+LGEE+ + +AGA IH D+MDG FVPNISFG V+R +R ++
Sbjct: 2 IKLAASILSADFSKLGEEVRTLDEAGADFIHIDIMDGNFVPNISFGIPVVRDIRKHTKLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ +G DIIT H E+ HI R+L I + G K VAINP TPV
Sbjct: 62 FDVHLMIEEPSKYVEQFVKSGADIITVHYETDRHIDRTLNYIKSFGVKAAVAINPGTPVN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++++++ DM+LIM+VNPGFGGQ+ I+ + KIR+ K + R I +EVDGGV S N
Sbjct: 122 MIKNLLTTADMVLIMSVNPGFGGQKYIDYSYDKIREVKKYADEIGRDILIEVDGGVDSTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
IK +V+AGA+++V GS+ F + L
Sbjct: 182 IKKVVEAGANVVVAGSAVFKNGDIKKNIELLK 213
>gi|300173587|ref|YP_003772753.1| ribulose-phosphate 3-epimerase [Leuconostoc gasicomitatum LMG
18811]
gi|299887966|emb|CBL91934.1| ribulose-phosphate 3-epimerase [Leuconostoc gasicomitatum LMG
18811]
Length = 218
Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+AD++ L ++ + AGA+ +H DVMDG FVP+IS+G ++ LR + +
Sbjct: 4 IIAPSILSADYTNLERDVKLVEAAGAEYLHIDVMDGNFVPSISYGPGWVKQLRPETKMML 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + + ++ ADAG DII H E++PHI R+L+ I G K V INP TPV
Sbjct: 64 DVHLMVMNPEKVVDEFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVLA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+E V+D +D +L+MTVNPGFGGQ+ + STI KI Q KA+ + +E+DGGV + I
Sbjct: 124 IESVLDMVDQVLVMTVNPGFGGQKFLPSTIEKIAQLKAIREELGYKFDIEIDGGVNNETI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA++ V GS +++ + L DL K
Sbjct: 184 TAAFEAGANVFVAGSYVYDKIDPTAKIATLKDLIK 218
>gi|300778475|ref|ZP_07088333.1| ribulose-phosphate 3-epimerase [Chryseobacterium gleum ATCC 35910]
gi|300503985|gb|EFK35125.1| ribulose-phosphate 3-epimerase [Chryseobacterium gleum ATCC 35910]
Length = 216
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 133/216 (61%), Gaps = 3/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ADF L EI + + A H DVMDG FVPNISFG V+++++ +
Sbjct: 1 MKTKL-IAPSLLSADFGNLQREIEMLNNSQADWFHVDVMDGRFVPNISFGFPVMKTVQQH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + +++ + G D+++ H E+ H+ R++ I G K GV +NP
Sbjct: 60 AKKFVDVHLMIVEPEKYVDEFINLGADLVSVHYEACTHLHRTIHHIQNKGAKAGVVLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV +LED+I ++D++L+M+VNPGFGGQ+ IE+T KI + K LI + +EVDGGV
Sbjct: 120 TPVLMLEDIIADVDLVLLMSVNPGFGGQKFIENTYKKIAETKDLILSNNSTALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N L +AGAD+LV G++ F+ + + L
Sbjct: 180 NLDNASKLFEAGADVLVAGNAVFSAESPERTIELLK 215
>gi|166713813|ref|ZP_02245020.1| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 223
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVITQMRAAVDAV 222
>gi|257784534|ref|YP_003179751.1| ribulose-phosphate 3-epimerase [Atopobium parvulum DSM 20469]
gi|257473041|gb|ACV51160.1| ribulose-phosphate 3-epimerase [Atopobium parvulum DSM 20469]
Length = 224
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 93/222 (41%), Positives = 140/222 (63%), Gaps = 4/222 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ + PS+L+ DFS+L E+ +I A A IH+DVMDG FVPNISFG D+ + SD
Sbjct: 3 NVLVAPSVLSTDFSKLKSELDSI--ANADYIHYDVMDGHFVPNISFGPDIFSYCKKSSDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+++ + D G D++TFH E+ H R + I G K G+++ P TPV
Sbjct: 61 PIDVHLMVTNPAEIAPLFLDRGADVVTFHYEAELHAHRLVHLIKDSGAKAGISLCPGTPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LED+I+++D++LIMTVNPGFGGQ+ I +I K++ K L K +++ +EVDGG++
Sbjct: 121 SVLEDLIEDLDLVLIMTVNPGFGGQKFIPHSIEKLKALKELCRKHNVNPLIEVDGGISEA 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
N +V AGA++LV GS+ F Q S + + +S L I
Sbjct: 181 NAADVVVAGANMLVAGSAVFGQVDRGSTIETIRSAGESVLTI 222
>gi|169834514|ref|YP_001695336.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|194396968|ref|YP_002038565.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae G54]
gi|168997016|gb|ACA37628.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|194356635|gb|ACF55083.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae G54]
Length = 218
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 135/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I +G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRLLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKGE----VNERVQTLRKQ 216
>gi|328353327|emb|CCA39725.1| ribulose-phosphate 3-epimerase [Pichia pastoris CBS 7435]
Length = 235
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 84/224 (37%), Positives = 123/224 (54%), Gaps = 12/224 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M + I PSIL+ADFS LG E + K A +H DVMDG FVPN++ G +I SLR
Sbjct: 1 MVKPV-IAPSILSADFSNLGCECHKMFKLRADWVHIDVMDGHFVPNLTMGPPIISSLRKA 59
Query: 60 --------YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
+ FDCH+M+++ + + +A AG D TFH E++ + + I + G
Sbjct: 60 VPRGEKDGQTTHFFDCHMMVANPEQWVPEVAKAGGDQYTFHYEATKDPVKLVELIKSHGL 119
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
K AI P T V +L + D++DM L+MTV PGFGGQ+ + +PK+ +A ++
Sbjct: 120 KAACAIKPGTSVDVLYPLADKLDMALVMTVEPGFGGQKFMADMMPKVEALRAKF--PNLD 177
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++VDGG+ I AGA+++V GSS F K + L D
Sbjct: 178 IQVDGGLGKETIGVAADAGANVIVAGSSVFGAKDPGEVIQFLRD 221
>gi|328881109|emb|CCA54348.1| Ribulose-phosphate 3-epimerase [Streptomyces venezuelae ATCC 10712]
Length = 227
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 88/219 (40%), Positives = 126/219 (57%), Gaps = 4/219 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSIL+ADF+RL +E + GA +H DVMD FVPN++ G ++ SL +D+
Sbjct: 3 QINPSILSADFARLADEAKAVD--GADWLHVDVMDNHFVPNLTLGVPIVESLARATDTPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 61 DCHLMIEDPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPIEP 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
ED++ E+DM+LIMTV PGFGGQ ++ +PKIR+ + LI K + L+VDGGV I
Sbjct: 121 YEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVAESTI 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AGAD+ V GS+ + + L ++ A
Sbjct: 181 ERCAEAGADVFVAGSAVYGAADPAAAVASLRARAEAVTA 219
>gi|212691033|ref|ZP_03299161.1| hypothetical protein BACDOR_00523 [Bacteroides dorei DSM 17855]
gi|212666265|gb|EEB26837.1| hypothetical protein BACDOR_00523 [Bacteroides dorei DSM 17855]
Length = 217
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 86/218 (39%), Positives = 128/218 (58%), Gaps = 3/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+A+F+ L +I I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MNRPL-ISPSLLSANFANLQADIEQINRSDADWLHIDIMDGVFVPNISFGFPVLKYVAEL 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + I + D G ++ H E+ H+ R ++ I G K V +NP
Sbjct: 60 CEKPLDVHLMIVNPEKFIKEVKDLGTMMMNVHYEACVHLHRVVQQIKDAGMKAAVTLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPVA+L D+I ++DM+L+M+VNPGFGGQ+ I T+ K+R+ + LI +EVDGGV
Sbjct: 120 TPVAMLVDIIRDVDMVLLMSVNPGFGGQKFIVHTLDKVRELRELITNTGSQALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ LV+ GAD+LV G++ F RL L
Sbjct: 180 NLETGRQLVEVGADVLVAGNAVFKAPDMSDMIHRLKSL 217
>gi|294627229|ref|ZP_06705816.1| ribulose-phosphate 3-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667707|ref|ZP_06732919.1| ribulose-phosphate 3-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598468|gb|EFF42618.1| ribulose-phosphate 3-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602547|gb|EFF45986.1| ribulose-phosphate 3-epimerase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 233
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 11 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDATGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVDAV 232
>gi|159045546|ref|YP_001534340.1| ribulose-phosphate 3-epimerase [Dinoroseobacter shibae DFL 12]
gi|157913306|gb|ABV94739.1| ribulose-phosphate 3-epimerase [Dinoroseobacter shibae DFL 12]
Length = 232
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 1/208 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSILAADF+ G E + + GA +H DVMDG FVPNI+FG ++R +
Sbjct: 5 RSIKIAPSILAADFANFGAECAAVEAQGADWVHVDVMDGHFVPNITFGPATCAAIRPHIK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI+ +D +I+ ADAG D+IT H E+ PHI R+L+ I G K G+A+NP T
Sbjct: 65 GVMDVHLMIAPVDPYIDAFADAGADVITAHLEAGPHIHRTLQAIRGAGAKAGLALNPGTG 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + ++D +D++ +MTVNPGFGGQ+ ++ + KIR +A+IG R I +E+DGGVT +
Sbjct: 125 LGDVGHLLDMVDLVCVMTVNPGFGGQKFLDMS-AKIRDLRAMIGDRPIHIEIDGGVTPQT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ +AGAD+LV GS+ F A
Sbjct: 184 APLVAKAGADVLVAGSAVFKGGSVADPA 211
>gi|148259043|ref|YP_001233170.1| ribulose-phosphate 3-epimerase [Acidiphilium cryptum JF-5]
gi|146400724|gb|ABQ29251.1| ribulose-5-phosphate 3-epimerase [Acidiphilium cryptum JF-5]
Length = 223
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PS I PS+LAADF RL EE++ + +AGA +H DVMDG FVPNISFGA V+ +LR ++
Sbjct: 7 PSPIIAPSLLAADFGRLREEVAAVERAGAHWLHLDVMDGHFVPNISFGALVLNALRPHTR 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI+ D ++ A AG D IT H E+ PH+ RSL+TI A+G K GVAINP TP
Sbjct: 67 LAFDVHLMIAPADPYLADFAKAGADHITVHAEAGPHLHRSLQTIRALGLKAGVAINPATP 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ V+D +D++ +MTVNPGFGGQ + +PKI + + ++ + R I +E DGG+ +
Sbjct: 127 AEAVRHVLDLVDIVNVMTVNPGFGGQSFLAGQLPKIAELRRMVTEAGRDIRIETDGGIDA 186
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ ++AGAD+L+ GS+ F + + L
Sbjct: 187 ASAPRALEAGADVLIAGSAIFGKPDYAAAIAAL 219
>gi|149012428|ref|ZP_01833459.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP19-BS75]
gi|168487120|ref|ZP_02711628.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|147763484|gb|EDK70420.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP19-BS75]
gi|183569967|gb|EDT90495.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|332072168|gb|EGI82654.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae GA41301]
Length = 218
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP T V
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTSVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|6094119|sp|P51012|RPE_RHOCA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2564973|gb|AAB82049.1| pentose-5-phosphate-3-epimerase [Rhodobacter capsulatus]
Length = 228
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 135/205 (65%), Gaps = 3/205 (1%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT SI+I PSIL+ADF+ G EI I GA +H DVMDG FVPN++FG + + R
Sbjct: 1 MTFDRSIKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ +V D HLMIS +D++I+ A AG D++T H E+ PHI R+L+ I A G K+GVAIN
Sbjct: 61 KHVKTVMDVHLMISPVDAYIDAYAQAGADVLTAHVEAGPHIHRTLQAIRAAGMKSGVAIN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TP +E V+D D++ +MTVNPGFGGQ+ I+ T K+R+ +A+IG R + +E+DGG+
Sbjct: 121 PGTPAEAIEHVLDIADVVCVMTVNPGFGGQKYIDMT-AKVRKLRAMIGDRPVHIEIDGGM 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS F
Sbjct: 180 DPVTAPLMAAAGADVFVAGSGVFKG 204
>gi|319791220|ref|YP_004152860.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus EPS]
gi|315593683|gb|ADU34749.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus EPS]
Length = 230
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 145/231 (62%), Gaps = 11/231 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSIL+ADF+ LG+E++++ AGA IHFDVMD +VPN++FG + ++L+ Y
Sbjct: 1 MSTPFRIAPSILSADFAHLGQELTDVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPY 60
Query: 61 ------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ D HLMI +D+ A AG D I+FHP++SPH+ RS++ I A G K G
Sbjct: 61 AKTADGTPVPIDVHLMIQPVDALAASFAQAGADYISFHPDASPHVHRSIQAIKAAGCKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP + L+ ID+ID+ILIM+VNPGFGGQ I+S + KI A+ I + R I L
Sbjct: 121 LVFNPGLGLEALDWAIDDIDLILIMSVNPGFGGQSFIDSALRKIELARKRIEQSGRDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
EVDGG+ + NI + AGAD V GS+ FN K Y + +++K+ +
Sbjct: 181 EVDGGIKADNIARVASAGADTFVAGSAIFNAKD---YGAVIGEMRKNLAGV 228
>gi|253580152|ref|ZP_04857419.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848671|gb|EES76634.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 223
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 136/216 (62%), Gaps = 5/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+ PSIL+ADF+RLGE+I + K G + +H DVMDG FVP+ISFG VI+S+R S F
Sbjct: 3 QLCPSILSADFNRLGEQIKTLEKEGIEWLHIDVMDGDFVPSISFGMPVIKSIRKESKLFF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ + +I + G D IT H E+ + R++ I G K GV+I P TPV
Sbjct: 63 DVHLMVTEPERYIRDFVECGADSITVHAEACEDLERTIEQIREAGVKVGVSIKPATPVND 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+ ++ ++DM+LIMTV PGFGGQ+ +E KIR+ + LI + ++VDGG+ +
Sbjct: 123 ISHMLSDVDMVLIMTVQPGFGGQKYMEECTEKIREVRELIEAEDLDVDVQVDGGINDETM 182
Query: 184 KSLVQAGADLLVVGSSFFN---QKGEISYAKRLNDL 216
++++ AGA+LLV GS FN K +R++++
Sbjct: 183 ETVLTAGANLLVAGSYVFNDDLAKNVKHARERMDEI 218
>gi|254455820|ref|ZP_05069249.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082822|gb|EDZ60248.1| ribulose-phosphate 3-epimerase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 219
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 142/218 (65%), Gaps = 3/218 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI PSIL+ADFS+LG EI + + GA IH DVMDG FVPN++ G VI++LR
Sbjct: 1 MKKIQISPSILSADFSQLGVEIKRLEEGGADMIHVDVMDGHFVPNLTIGPPVIKALRKQC 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D FD HLMIS + +I ADAG DIIT HPE++ ++ S+ I + KK GV++NPE+
Sbjct: 61 DLKFDVHLMISPVHKYIESYADAGADIITIHPEATDNLEASILKIRELNKKVGVSLNPES 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
+ +++ +D+ID+ILIM+VNPGFGGQ+ + + KI++ K + ++ +E+DGG+
Sbjct: 121 KIDLIKGFLDKIDLILIMSVNPGFGGQKFMPEVLEKIKELKKIQNNNNLDFDIEIDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N K ++AGA++LV G++ F K +N LK
Sbjct: 181 FDNCKDAIEAGANILVSGTTIFKSNNG-DIKKNINLLK 217
>gi|256832543|ref|YP_003161270.1| ribulose-phosphate 3-epimerase [Jonesia denitrificans DSM 20603]
gi|256686074|gb|ACV08967.1| ribulose-phosphate 3-epimerase [Jonesia denitrificans DSM 20603]
Length = 240
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 125/217 (57%), Gaps = 4/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SIQI PSIL+AD++ L E+ IT+ A +H DVMD FVPN+++G V+ + S
Sbjct: 2 SIQIAPSILSADYANLESELHRITE--ADWVHVDVMDNHFVPNLTWGLPVVERIAQVSPL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D A+AG +TFH E++ R R + G + G+A+ P T +
Sbjct: 60 PLDTHLMIDNADRWAPQYAEAGSHSVTFHAEATQAPVRLARELRRQGARAGIALRPATGI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
D++ E DM+LIMTV PGFGGQ IES + KIR+ +A I + + ++VDGG++ +
Sbjct: 120 EPYLDLLPEFDMVLIMTVEPGFGGQSFIESMVHKIRRTRAAIDANQLDVWVQVDGGISEK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I AGA++ V GS+ FN + + L L +
Sbjct: 180 TIDQAADAGANVFVAGSAVFNAEDIPAQITTLRSLAQ 216
>gi|213963426|ref|ZP_03391681.1| ribulose-phosphate 3-epimerase [Capnocytophaga sputigena Capno]
gi|213953946|gb|EEB65273.1| ribulose-phosphate 3-epimerase [Capnocytophaga sputigena Capno]
Length = 214
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 136/214 (63%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+LAADF L + I + + A H D+MDG FVPNIS+G V+ ++ ++
Sbjct: 1 MILAPSLLAADFGNLQQAIEMVNASEADWFHIDIMDGVFVPNISYGMPVLSVIQKHATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +I+ A G DI+T H E+ H+ R+L+ I A K GVA+NP TPV+
Sbjct: 61 LDVHLMIVDPSRYISTFAKLGSDILTVHYEACTHLHRTLQAIKAENMKAGVALNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+LED+I ++D++L+M+VNPGFGGQ IE+T K+RQAK LI + S +E+DGGV+ +N
Sbjct: 121 VLEDIIQDVDVLLLMSVNPGFGGQSFIENTYKKVRQAKTLIEQSGASTLIEIDGGVSLKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K+LV+AGAD LV GS FN L +
Sbjct: 181 AKALVEAGADALVAGSFVFNAANPTQTIADLKHI 214
>gi|209965634|ref|YP_002298549.1| ribulose-phosphate 3-epimerase [Rhodospirillum centenum SW]
gi|209959100|gb|ACI99736.1| ribulose-phosphate 3-epimerase [Rhodospirillum centenum SW]
Length = 223
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 100/216 (46%), Positives = 151/216 (69%), Gaps = 3/216 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++I PSIL+ADF+RLGEE+ + AGA IH DVMDG FVPNI+ G ++++LR +S
Sbjct: 5 PVRIAPSILSADFARLGEEVRAVDAAGADYIHVDVMDGHFVPNITLGPGIVKALRPHSAK 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFD HLMI+ +D ++ A+AG DII+FHPE+ PH R+++ I ++GK+ G+ +NP TPV
Sbjct: 65 VFDVHLMIAPVDPYVVAFAEAGADIISFHPEAGPHPHRTVQLIRSLGKRPGIVLNPHTPV 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
A+++ ++D++D++L+M+VNPGFGGQ I S + KI + I R++ LEVDGG+
Sbjct: 125 AMVDYLLDDVDLVLVMSVNPGFGGQSFIASQLRKIADLRRRIDASGRTVDLEVDGGINVT 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ V+AGAD+LV G++ F Q G +Y + L+
Sbjct: 185 TARQAVEAGADVLVAGTATF-QGGPAAYGANIRRLR 219
>gi|325269174|ref|ZP_08135794.1| ribulose-phosphate 3-epimerase [Prevotella multiformis DSM 16608]
gi|324988561|gb|EGC20524.1| ribulose-phosphate 3-epimerase [Prevotella multiformis DSM 16608]
Length = 219
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 134/220 (60%), Gaps = 3/220 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I + PS+L+ADF L +EI I ++ A +H DVMDG FVPNISFG V+ ++
Sbjct: 1 MMETI-VSPSLLSADFLHLDKEIEMINESEADWLHMDVMDGVFVPNISFGFPVLNAVGKV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI +++I ADAG I+ H E+ H+ R+L+ I A G K GV +NP
Sbjct: 60 CRKPMDVHLMIVHPENYIQQTADAGAAIMNVHYEACIHLHRTLQAIRAAGMKAGVTLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +LED+I +ID++ +M+VNPGFGGQ+ IE +I K+++ + LI +EVDGGV
Sbjct: 120 TPVNVLEDIIGDIDIVQLMSVNPGFGGQKFIEHSIKKVQRLRQLIAHEGSHALIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ LV AGAD+LV GS F + L L++
Sbjct: 180 QAETAPRLVDAGADILVSGSYVFKAGDPKAVIHALKSLQR 219
>gi|326402170|ref|YP_004282251.1| ribulose-5-phosphate 3-epimerase [Acidiphilium multivorum AIU301]
gi|325049031|dbj|BAJ79369.1| ribulose-5-phosphate 3-epimerase [Acidiphilium multivorum AIU301]
Length = 220
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
PS I PS+LAADF RL EE++ + +AGA +H DVMDG FVPNISFGA V+ +LR ++
Sbjct: 4 PSPIIAPSLLAADFGRLREEVAAVERAGAHWLHLDVMDGHFVPNISFGALVLNALRPHTR 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI+ D ++ A AG D IT H E+ PH+ RSL+TI A+G K GVAINP TP
Sbjct: 64 LAFDVHLMIAPADPYLADFAKAGADQITVHAEAGPHLHRSLQTIRALGLKAGVAINPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
+ V+D ID+I +MTVNPGFGGQ + +PKI + + ++ + R I +E DGG+ +
Sbjct: 124 AEAVRHVLDLIDIINVMTVNPGFGGQSFLAGQLPKIAELRRMVTEAGRDIRIETDGGIDA 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ ++AGAD+L+ GS+ F + + L
Sbjct: 184 ASAPRALEAGADVLIAGSAIFGKPDYAAAIAAL 216
>gi|291527111|emb|CBK92697.1| ribulose-phosphate 3-epimerase [Eubacterium rectale M104/1]
Length = 243
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+AD+S LGE++ + +AGA+ +H DVMDG FVP+IS G VI+++R ++ +FD
Sbjct: 31 LSPSILSADYSILGEQLKQLDEAGAQYVHIDVMDGSFVPSISIGLPVIKTIRKCTERMFD 90
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I+ A AG DIIT H E+ H+ R++ I G GVA+NP TP++ +
Sbjct: 91 VHLMIDEPVRYIDDFATAGADIITVHAEACKHLDRTIEAIKEKGILAGVALNPATPLSAI 150
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E V+ ++DM+LIMTVNPGFGGQ+LI T+ K+R KAL+ K +EVDGGV N++
Sbjct: 151 EYVLPKVDMVLIMTVNPGFGGQKLIPYTVDKVRDLKALLEKTANKADIEVDGGVNLENVE 210
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+L+ AGA+++V GS+ F+ E + LN +
Sbjct: 211 TLLAAGANIIVAGSAVFSGDIEENVKGFLNIM 242
>gi|322386718|ref|ZP_08060342.1| ribulose-phosphate 3-epimerase [Streptococcus cristatus ATCC 51100]
gi|321269000|gb|EFX51936.1| ribulose-phosphate 3-epimerase [Streptococcus cristatus ATCC 51100]
Length = 219
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 137/216 (63%), Gaps = 3/216 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ +I PS+L+AD++ E+ + +GA+ H DVMDG FVPNISFGA V+ S+R +S
Sbjct: 1 MKTFKIAPSVLSADYANFETELKKLEASGAEYAHLDVMDGHFVPNISFGAGVVASMRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP T
Sbjct: 61 KMVFDCHLMVSNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRAAGVKPSVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
PV +++V++ +D +L+MTVNPGFGGQ + T+ KIR+ AL + + +EVDGG+
Sbjct: 121 PVEAIKNVLNLVDQVLVMTVNPGFGGQAFLPETMSKIRELVALREANQLNFDIEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ I+ +AGA++ V GS F + L D
Sbjct: 181 DKTIQMAREAGANVFVAGSYVFKG-DVSHQVQTLRD 215
>gi|238898716|ref|YP_002924397.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|229466475|gb|ACQ68249.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 225
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 92/225 (40%), Positives = 140/225 (62%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+A+F+RLGE+ +N+ +AGA IHFDVMD +VPN++ G V ++LR +
Sbjct: 1 MKKYLIAPSILSANFARLGEDTANVLRAGADFIHFDVMDNHYVPNLTMGPMVCQALRDHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM+ +D+ ++ A AG I+FHPE+S HI R+L+ I G + G+A NP
Sbjct: 61 IEAPIDVHLMVKPVDALVSRFAQAGASYISFHPEASEHIDRTLQLIKQQGCQAGLAFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T + L+ V+D++D+IL+M+VNPGFGGQ I ST K+ Q + +I + EVDGG+
Sbjct: 121 TSLHYLDYVLDKLDLILLMSVNPGFGGQAFIPSTFKKLSQVRKIIDDSGYDIRLEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + GAD+ V GS+ F+Q Y ++ ++ L +
Sbjct: 181 KVDNIAEVAHCGADIFVAGSAIFSQPD---YHVVIHAMRNELLKV 222
>gi|316932899|ref|YP_004107881.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris DX-1]
gi|315600613|gb|ADU43148.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris DX-1]
Length = 232
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 106/221 (47%), Positives = 149/221 (67%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + AG IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 7 RPLAIAPSILASDFSKLGEEVRAVDTAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTK 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VFD HLMI+ D ++ A AGCDIIT H E+ PH+ RSL+ I +GKK GV++NP T
Sbjct: 67 KVFDAHLMIAPCDPYLEAFAKAGCDIITVHAEAGPHLHRSLQAIRGLGKKAGVSLNPGTH 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +E V+D+ID++L+M+VNPGFGGQ I S + KIRQ +A++ R I +EVDGGV+ +
Sbjct: 127 PSAIEYVLDDIDLVLVMSVNPGFGGQAFIPSAVQKIRQIRAMVADRPIDIEVDGGVSDKV 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
L AGA+ V GS+ F SY + ++ +A++
Sbjct: 187 AGELAAAGANAFVAGSAVFKGGTLESYKANIAGIRNAAMSA 227
>gi|288803661|ref|ZP_06409091.1| ribulose-phosphate 3-epimerase [Prevotella melaninogenica D18]
gi|288333901|gb|EFC72346.1| ribulose-phosphate 3-epimerase [Prevotella melaninogenica D18]
Length = 218
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 90/215 (41%), Positives = 131/215 (60%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PS+L+ADF L +EI I ++ A +H DVMDG FVPNISFG V+ ++
Sbjct: 2 EIIVSPSLLSADFLHLDKEIEMINESEADWLHMDVMDGVFVPNISFGFPVLEAVGKACKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H MI +++I AD G I+ E+ H+ R+++ IHA G K GV +NP TPV
Sbjct: 62 PMDVHFMIVHPENYIQQTADTGAAIMNVQYEACVHLHRTIQAIHAAGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LED+I ++D++ +M+VNPGFGGQ+ IES+I K+++ + LI + + +EVDGGV +
Sbjct: 122 NVLEDIIGDVDIVQLMSVNPGFGGQKFIESSIKKVQRLRQLIEREGSNALIEVDGGVQAD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AG D+LV GS F + L L
Sbjct: 182 TAPRLVEAGVDILVSGSYVFKAADPKATIHSLKQL 216
>gi|242373511|ref|ZP_04819085.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
M23864:W1]
gi|242348874|gb|EES40476.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
M23864:W1]
Length = 214
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++++PS+L+ DF L EE+ + KA +HFDVMDG FVPNIS G ++ +++SYS+
Sbjct: 2 VKVLPSLLSVDFLNLKEELDQLEKANVDGLHFDVMDGQFVPNISIGIPLLDAVKSYSNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + +I + A+ G D+I+ H E++PHI ++ I + KK GV INP TPV
Sbjct: 62 IDVHLMIEQPEKYIKLFAEHGADMISVHVEATPHIHSAIEEIKQLNKKAGVVINPGTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ IE I KI Q L + ++ +EVDGG+ +
Sbjct: 122 TILPVLSNVDYVLVMTVNPGFGGQSFIEQCINKIEQLNQLKHENNLTFDIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K ++ GA +LV GS FF Q + L
Sbjct: 182 SKVCIEQGATMLVTGSYFFKQDNYAQVTETLK 213
>gi|315222374|ref|ZP_07864279.1| ribulose-phosphate 3-epimerase [Streptococcus anginosus F0211]
gi|315188535|gb|EFU22245.1| ribulose-phosphate 3-epimerase [Streptococcus anginosus F0211]
Length = 219
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 139/220 (63%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S +I PSIL+AD++ E+ + AGA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 1 MKSYKIAPSILSADYANFESELKKLEAAGAEYAHIDIMDGHFVPNISFGAGVVASMRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP T
Sbjct: 61 RLVFDCHLMVSNPEHHIKDFARAGADIISIHAEATPHIHGALQKIRAAGVKASVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGVT 179
PV +++V++ +D +L+MTVNPGFGGQ + T+ K+R+ + + +EVDGG+
Sbjct: 121 PVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELVVLREVNQLDFDIEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ +AGA++ V GS F A+++ LK++
Sbjct: 181 DETIRIAKEAGANVFVAGSYVFKG----DVARQVQTLKEA 216
>gi|331006536|ref|ZP_08329831.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC1989]
gi|330419658|gb|EGG94029.1| Ribulose-phosphate 3-epimerase [gamma proteobacterium IMCC1989]
Length = 225
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 142/226 (62%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ I PSIL+A+F+ LG E+ N+ AGA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MQKNM-IAPSILSANFACLGAEVDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I++ ADAG ITFHP++S HI RSL+ I G K G+ +NP
Sbjct: 60 GVTAPIDVHLMVDPVDDLISMFADAGASYITFHPDASRHIDRSLQLIKQKGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
P+ + V+ ++DM+L+M+VNPGFGGQ+ I T+ K+R+A+A I + LE+DGG
Sbjct: 120 AVPIDGIRHVLPQLDMLLLMSVNPGFGGQKFIPYTLDKLREARAAIDALGLDTRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
VT NI + AGAD V GS+ F + Y + + +++ ++
Sbjct: 180 VTVNNIAEIAAAGADTFVAGSAIFGSED---YQQTITAMREQLDSV 222
>gi|268317601|ref|YP_003291320.1| ribulose-phosphate 3-epimerase [Rhodothermus marinus DSM 4252]
gi|262335135|gb|ACY48932.1| ribulose-phosphate 3-epimerase [Rhodothermus marinus DSM 4252]
Length = 224
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 146/223 (65%), Gaps = 9/223 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-- 62
+ + PSIL+ADF+RLGE+ +AGA IH DVMDG FVPNI+ G V+ +LR +D
Sbjct: 2 VILAPSILSADFARLGEQCREALEAGADWIHIDVMDGHFVPNITMGPLVVEALRPLADEL 61
Query: 63 -SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+V D HLM+ + + A AG D +T H E++PH+ R+L I +GKK GVA+NP T
Sbjct: 62 GAVLDVHLMVERPERFLEDFARAGADNLTVHVEATPHLHRALDEIRRLGKKVGVALNPAT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGV 178
P++ LE+V+ +D+IL+MTV+PGFGGQ I S+ K+++ + L IG + +EVDGG+
Sbjct: 122 PLSALEEVLPLVDLILVMTVDPGFGGQDYIPSSTLKVQRLRRLLNAIGSHAY-IEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
N+ +V+AGA ++V GS+ FN+ + A+ + +++ L
Sbjct: 181 YPHNVAEVVRAGATVIVAGSAIFNRHAPV--AQNVAAFRQALL 221
>gi|261415931|ref|YP_003249614.1| ribulose-phosphate 3-epimerase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372387|gb|ACX75132.1| ribulose-phosphate 3-epimerase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325653|gb|ADL24854.1| ribulose-phosphate 3-epimerase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 216
Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 129/207 (62%), Gaps = 2/207 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L A+F LG + I GA +H D+MDG FVPNISFG + ++ +
Sbjct: 5 IIAPSVLNANFLELGNGLKAIENGGAGLVHLDIMDGHFVPNISFGPGISACVKKGTKLPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI + ++++ A AG II+ H E++ H+ R L I +G K VAINP TP+
Sbjct: 65 DCHLMIENPENYVGEFAKAGASIISVHAETTNHLDRLLHQIAELGVKPAVAINPATPLES 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
++ V+D +DM+LIM+VNPGFGGQ LI + KIR+ +AL + +++++DGGV NI +
Sbjct: 125 IKYVLDIVDMVLIMSVNPGFGGQSLIPYCLDKIRELRALKPE--LNIQIDGGVKLDNILA 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKR 212
+AGA++ VVGS+ F + + +
Sbjct: 183 CKEAGANIFVVGSAIFGKPDPEAVCRE 209
>gi|21241246|ref|NP_640828.1| ribulose-phosphate 3-epimerase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106561|gb|AAM35364.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 223
Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + A+AG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFANAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDATGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVDAV 222
>gi|110597091|ref|ZP_01385380.1| ribulose-phosphate 3-epimerase [Chlorobium ferrooxidans DSM 13031]
gi|110341282|gb|EAT59747.1| ribulose-phosphate 3-epimerase [Chlorobium ferrooxidans DSM 13031]
Length = 221
Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 139/217 (64%), Gaps = 2/217 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S + PSIL+ADF+ L I+ AGA+ IH D+MDG FVPNI+FG +++++ S +
Sbjct: 3 AHSTLLAPSILSADFTDLRSSIAIAENAGAEWIHCDIMDGNFVPNITFGPFIVQAIASCT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLMI++ D +I AG IT H E+ PH+ R+++ I ++G K GV+INP T
Sbjct: 63 SMIIDTHLMIAAPDRYIEEFVKAGSHQITVHQEACPHLHRTIQFIKSLGAKAGVSINPGT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
PV+ LE ++ ++D++L+M+VNPGFGGQ+ I S+I KIR+ + + + + +DGG+T
Sbjct: 123 PVSTLESILPDLDLVLLMSVNPGFGGQKFIPSSIGKIRELHNMRTRINPELVIAIDGGIT 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N + +V AGAD L+ G++FF A ++ L
Sbjct: 183 EDNAQEVVSAGADALIAGTAFFKAANPAETAAKIRAL 219
>gi|291526155|emb|CBK91742.1| ribulose-phosphate 3-epimerase [Eubacterium rectale DSM 17629]
Length = 243
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+AD+S LGE++ + +AGA+ +H DVMDG FVP+IS G VI+++R ++ +FD
Sbjct: 31 LSPSILSADYSILGEQLKQLDEAGAQYVHIDVMDGSFVPSISIGLPVIKTIRKCTERMFD 90
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I+ A AG DIIT H E+ H+ R++ I G GVA+NP TP++ +
Sbjct: 91 VHLMIDEPVRYIDDFAAAGADIITVHAEACKHLDRTIEAIKEKGILAGVALNPATPLSAI 150
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E V+ ++DM+LIMTVNPGFGGQ+LI T+ K+R KAL+ K +EVDGGV N++
Sbjct: 151 EYVLPKVDMVLIMTVNPGFGGQKLIPYTVDKVRDLKALLEKTANKADIEVDGGVNLENVE 210
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+L+ AGA+++V GS+ F+ E + LN +
Sbjct: 211 TLLAAGANIIVAGSAVFSGDIEENVKGFLNIM 242
>gi|302345645|ref|YP_003813998.1| ribulose-phosphate 3-epimerase [Prevotella melaninogenica ATCC
25845]
gi|302150074|gb|ADK96336.1| ribulose-phosphate 3-epimerase [Prevotella melaninogenica ATCC
25845]
Length = 218
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 90/215 (41%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PS+L+ADF L +EI I ++ A +H DVMDG FVPNISFG V+ ++
Sbjct: 2 EIIVSPSLLSADFLHLDKEIEMINESEADWLHMDVMDGVFVPNISFGFPVLEAVGKACKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H MI +++I AD G I+ E+ H+ R+++ IHA G K GV +NP TPV
Sbjct: 62 PMDVHFMIVHPENYIQQTADTGAAIMNVQYEACVHLHRTIQAIHAAGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LED+I ++D++ +M+VNPGFGGQ+ IES+I K+++ + LI + +EVDGGV +
Sbjct: 122 NVLEDIIGDVDIVQLMSVNPGFGGQKFIESSIKKVQRLRQLIDREGSKALIEVDGGVQAD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AG D+LV GS F + L L
Sbjct: 182 TAPRLVEAGVDILVSGSYVFKAADPKATIHSLKQL 216
>gi|325919159|ref|ZP_08181216.1| ribulose-5-phosphate 3-epimerase [Xanthomonas gardneri ATCC 19865]
gi|325550366|gb|EGD21163.1| ribulose-5-phosphate 3-epimerase [Xanthomonas gardneri ATCC 19865]
Length = 223
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 148/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVDAV 222
>gi|294677365|ref|YP_003577980.1| ribulose-phosphate 3-epimerase [Rhodobacter capsulatus SB 1003]
gi|294476185|gb|ADE85573.1| ribulose-phosphate 3-epimerase-1 [Rhodobacter capsulatus SB 1003]
Length = 228
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 96/201 (47%), Positives = 133/201 (66%), Gaps = 1/201 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+I PSIL+ADF+ G EI I GA +H DVMDG FVPN++FG + + R +
Sbjct: 5 RSIKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVK 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLMIS +D++I+ A AG D++T H E+ PHI R+L+ I A G K+GVAINP TP
Sbjct: 65 TVMDVHLMISPVDAYIDAYAQAGADVLTAHVEAGPHIHRTLQAIRAAGMKSGVAINPGTP 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+E V+D D++ +MTVNPGFGGQ+ I+ T K+R+ +A+IG R + +E+DGG+
Sbjct: 125 AEAIEHVLDIADVVCVMTVNPGFGGQKYIDMT-AKVRKLRAMIGDRPVHIEIDGGMDPVT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQ 203
+ AGAD+ V GS F
Sbjct: 184 APLMAAAGADVFVAGSGVFKG 204
>gi|24378849|ref|NP_720804.1| ribulose-phosphate 3-epimerase [Streptococcus mutans UA159]
gi|24376726|gb|AAN58110.1|AE014882_13 putative ribulose-phosphate-3-epimerase [Streptococcus mutans
UA159]
Length = 219
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSILAAD++ E+ I + G K +H D+MDG FVP+ISFGA V+ S+R +S VF
Sbjct: 5 QIAPSILAADYANFESELKRIEETGVKYVHIDIMDGQFVPSISFGAGVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ + AG DI+T H E++ HI +L+ I G K G+ INP TPVA
Sbjct: 65 DCHLMVVNPERYVDDFSQAGADIMTVHVEATHHIHGALQKIKDAGMKAGIVINPGTPVAD 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
LE V+ D ILIMTVNPGFGGQ I + K+R L ++ + +EVDGG+ + I
Sbjct: 125 LESVLSLADQILIMTVNPGFGGQAFIPEMLEKVRTVAKLREEKGLSFDIEVDGGIDNETI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K QAGA++ V GS F + + + L
Sbjct: 185 KLAKQAGANIFVAGSYLFK-ENLAAQVETLKA 215
>gi|34541246|ref|NP_905725.1| ribulose-phosphate 3-epimerase [Porphyromonas gingivalis W83]
gi|188994382|ref|YP_001928634.1| putative ribulose-phosphate 3-epimerase [Porphyromonas gingivalis
ATCC 33277]
gi|34397562|gb|AAQ66624.1| ribulose-phosphate 3-epimerase [Porphyromonas gingivalis W83]
gi|188594062|dbj|BAG33037.1| putative ribulose-phosphate 3-epimerase [Porphyromonas gingivalis
ATCC 33277]
Length = 218
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 132/217 (60%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + PS+L+ADF L +++ I ++ A +H DVMDG FVPN+SFG ++ ++R
Sbjct: 1 MQP--IVSPSLLSADFLHLADDVEMINRSEADWLHIDVMDGVFVPNLSFGFPILEAIRPI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI ++ +A+ G ++ H E+SPH+ RSL I G K+GV +NP
Sbjct: 59 CKKPLDVHLMIVEPMKFVDRLAELGVYMMNVHYEASPHLHRSLAAIRKAGMKSGVTLNPH 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +L DV++E DM+L+M+VNPGFGGQ+ IE TI K ++ + +I + + +++DGGV
Sbjct: 119 TPVEVLTDVLEEADMVLLMSVNPGFGGQKFIERTIDKTQRLRRMIDSQGLDTIVQIDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ K L++AGAD LV GS F + L
Sbjct: 179 NAATGKRLIEAGADSLVAGSYVFGAEKPEEAISLLKS 215
>gi|270292090|ref|ZP_06198305.1| ribulose-phosphate 3-epimerase [Streptococcus sp. M143]
gi|270279618|gb|EFA25460.1| ribulose-phosphate 3-epimerase [Streptococcus sp. M143]
Length = 218
Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 6/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MDG FVP ISFGA V+ +LR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDGDFVPQISFGAGVVEALRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+++ + H+ A AG DII+ H E++ HI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVANPEHHLEDFARAGADIISIHVEATHHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
++ ++ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ + +EVDGG+ + I
Sbjct: 125 IKHILHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRQEKGLSFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F +R+ L+K
Sbjct: 185 AQAKEAGATVFVAGSYVFKG----DVNERVQTLRKQ 216
>gi|319940002|ref|ZP_08014356.1| ribulose-phosphate 3-epimerase [Streptococcus anginosus 1_2_62CV]
gi|319810716|gb|EFW07043.1| ribulose-phosphate 3-epimerase [Streptococcus anginosus 1_2_62CV]
Length = 219
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 135/220 (61%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S +I PSIL+AD++ E+ + GA H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 1 MKSYKIAPSILSADYANFESELKKLEATGADYAHIDIMDGHFVPNISFGAGVVASMRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP T
Sbjct: 61 KLVFDCHLMVSNPEHHIEDFARAGADIISIHAEATPHIHGALQKIRAAGVKASVVINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGVT 179
PV +++V++ +D +L+MTVNPGFGGQ + T+ K+R+ + + +EVDGG+
Sbjct: 121 PVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKVRELVVLREVNQLDFDIEVDGGID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I +AGA++ V GS F A ++ LK++
Sbjct: 181 DETIGIAKEAGANVFVAGSYVFKG----DVAHQVQTLKEA 216
>gi|197098216|ref|NP_001126655.1| ribulose-phosphate 3-epimerase [Pongo abelii]
gi|75061668|sp|Q5R5Y2|RPE_PONAB RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Ribulose-5-phosphate-3-epimerase
gi|55732261|emb|CAH92834.1| hypothetical protein [Pongo abelii]
Length = 228
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 120/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + FH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+++V GS+ + S L +
Sbjct: 179 GPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
>gi|255074321|ref|XP_002500835.1| ribulose-phosphate 3-epimerase [Micromonas sp. RCC299]
gi|226516098|gb|ACO62093.1| ribulose-phosphate 3-epimerase [Micromonas sp. RCC299]
Length = 268
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S+ + PSIL+A+F+ LG E+ + +AGA+ IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 46 KNSVIVSPSILSANFATLGAEVKAVDEAGAEWIHIDVMDGRFVPNITIGPLVVDALRPVT 105
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D V D HLMI + + A AG DII+ H E S+ H+ R++ I +G K GV +NP
Sbjct: 106 DKVLDTHLMIVEPELRVADFAKAGSDIISVHAEGASTIHLHRTINQIKDLGCKAGVVLNP 165
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
T LE ++D +D+IL+M+VNPGFGGQ IES + KI++ KA+ + ++ +EVDGG
Sbjct: 166 GTHPDCLEYILDCVDLILVMSVNPGFGGQSFIESQVDKIKKIKAMCDAKGVNPWIEVDGG 225
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V+ N ++ AGA+ LV GS+ FN YAK + +K S
Sbjct: 226 VSPANAYKVIDAGANALVAGSAVFNSDD---YAKAIAGIKAS 264
>gi|188989887|ref|YP_001901897.1| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. B100]
gi|167731647|emb|CAP49825.1| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris]
Length = 233
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE+ N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 11 MQPTA-IAPSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRLVPDFADAGATTISFHPEASRHVHRTIQLIRSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDALGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQIIAQMRAAVDAA 232
>gi|318037404|ref|NP_001187613.1| ribulose-phosphate 3-epimerase [Ictalurus punctatus]
gi|308323500|gb|ADO28886.1| ribulose-phosphate 3-epimerase [Ictalurus punctatus]
Length = 228
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL++D S+LG E + + GA +H DVMDG FVPNI+FG ++ LR
Sbjct: 1 MAYTAKIGPSILSSDLSQLGRECERMMECGADYLHLDVMDGHFVPNITFGHPMVECLRKA 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 VGPNPFFDMHMMVSRPEQWVRPMAAAGANQYTFHLEATTNPGSLIKEIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ ++ S+ +EVDGGV
Sbjct: 121 PGTTVEELAQWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ + L D
Sbjct: 179 GPDTIHRCAEAGANMIVSGSAVLGSADPRTVIALLKD 215
>gi|260592189|ref|ZP_05857647.1| ribulose-phosphate 3-epimerase [Prevotella veroralis F0319]
gi|260535823|gb|EEX18440.1| ribulose-phosphate 3-epimerase [Prevotella veroralis F0319]
Length = 218
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 89/215 (41%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADF RL +EI I ++ A +H D+MDG FVPNISFG ++ ++
Sbjct: 4 IVSPSLLSADFLRLDKEIEMINESDADWLHMDIMDGVFVPNISFGFPILEAVGKACKKPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H MI +++I AD G I+ E+ H+ R+++ IH G K GV +NP TPV +
Sbjct: 64 DVHFMIVHPENYIQQTADTGAAIMNVQYEACVHLHRTIQAIHNAGMKAGVTLNPSTPVNV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LED+I ++D++ +M+VNPGFGGQ+ IE TI K+++ + LI K + +EVDGGV
Sbjct: 124 LEDIICDVDIVQLMSVNPGFGGQRFIEHTIKKVQRLRQLIEKENSKALIEVDGGVQQETA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LVQAG D+LV GS F + L L++
Sbjct: 184 PRLVQAGTDILVSGSYVFKASDPKAAIHSLKTLRR 218
>gi|255038853|ref|YP_003089474.1| ribulose-phosphate 3-epimerase [Dyadobacter fermentans DSM 18053]
gi|254951609|gb|ACT96309.1| ribulose-phosphate 3-epimerase [Dyadobacter fermentans DSM 18053]
Length = 215
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAADF+ L ++ I + A IH D+MDG FVPNISFG V ++ ++
Sbjct: 3 EIAPSILAADFANLQRDVEMINNSSAGYIHVDIMDGMFVPNISFGLPVCEAIHRHAKKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D ++ +AG IT H E+ PH+ R+++ I +G + GVA+NP TPV +
Sbjct: 63 DVHLMIEQPDRYLEAFRNAGASGITVHYEACPHLHRTIQHIKELGAEPGVALNPHTPVEV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L +++ ++ +ILIM+VNPGFGGQ+ IE+T KI + + +EVDGGV N
Sbjct: 123 LSEIMGDVSLILIMSVNPGFGGQKFIENTYKKIATLDRYRKEFGYNFKIEVDGGVNLNNA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
LV+ G D+LV GS F L
Sbjct: 183 PRLVREGVDILVAGSFVFTSPDPAKTIAEL 212
>gi|296170730|ref|ZP_06852303.1| ribulose-phosphate 3-epimerase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894613|gb|EFG74349.1| ribulose-phosphate 3-epimerase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 229
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RL +E + + GA +H DVMD FVPN++ G V+ SL + + D
Sbjct: 10 IAPSILSADFARLADEAAAVV--GADWLHVDVMDNHFVPNLTIGLPVVESLLAATTIPMD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 68 CHLMIEDPDRWAPGYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+++ + D +LIM+V PGFGGQ I + K+R A+ LI + +I +E+DGG+ I+
Sbjct: 128 LEILPQFDTLLIMSVEPGFGGQSFIPEVLSKVRTARKLIDAGELTILVEIDGGINDDTIE 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+AG D V GS+ + + + + L++ A A+
Sbjct: 188 QAAEAGVDCFVAGSAVYGAEDPEA---AVAALRRQAAAV 223
>gi|290581124|ref|YP_003485516.1| putative ribulose-phosphate-3-epimerase [Streptococcus mutans
NN2025]
gi|254998023|dbj|BAH88624.1| putative ribulose-phosphate-3-epimerase [Streptococcus mutans
NN2025]
Length = 219
Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PSILAAD++ E+ I + G K +H D+MDG FVP+ISFGA V+ S+R +S VF
Sbjct: 5 QIAPSILAADYANFESELKRIEETGVKYVHIDIMDGQFVPSISFGAGVVASMRKHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + + +++ + AG DI+T H E++ HI +L+ I A G K G+ INP TPVA
Sbjct: 65 DCHLMVVNPERYVDDFSQAGADIMTVHVEATHHIHGALQKIKAAGMKAGIVINPGTPVAD 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
LE V+ D ILIMTVNPGFGGQ I + K+R L ++ + +EVDGG+ + I
Sbjct: 125 LESVLSLADQILIMTVNPGFGGQAFIPEMLEKVRTVAKLREEKGLSFDIEVDGGIDNETI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K QAGA++ V GS F + + + L
Sbjct: 185 KLAKQAGANIFVAGSYLFK-ENLAAQVETLKA 215
>gi|327462727|gb|EGF09049.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1057]
gi|327488827|gb|EGF20626.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1058]
gi|328944607|gb|EGG38768.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1087]
Length = 219
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 134/206 (65%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PSIL+AD++ E+ + + GA+ H D+MDG FVPNISFGA V+ S+R +
Sbjct: 1 MT-SFKIAPSILSADYANFESELKKLEETGAEYAHIDIMDGHFVPNISFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP
Sbjct: 60 SKLVFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGV 178
TPV +++V++ +D +L+MTVNPGFGGQ + T+ KIR+ + + + +EVDGG+
Sbjct: 120 TPVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I +AGA++ V GS F
Sbjct: 180 DDKTIGIAKEAGANVFVAGSYVFKGD 205
>gi|289449539|ref|YP_003475431.1| ribulose-phosphate 3-epimerase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184086|gb|ADC90511.1| ribulose-phosphate 3-epimerase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 240
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 89/225 (39%), Positives = 141/225 (62%), Gaps = 10/225 (4%)
Query: 1 MTPSIQI-------VPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADV 53
M PS I PSIL+ADF++LG I + A IH D+MDG FVPN++FG +
Sbjct: 1 MLPSFNITRGQAQFCPSILSADFAKLGTVIQQL-DGVAHWIHVDIMDGHFVPNLTFGVPI 59
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
++++R+YS FDCHLM++ +I ++ AG D +T H E+ PH+ R ++ I + G
Sbjct: 60 VKAIRAYSQLPFDCHLMVTDPMDYIEGLSAAGADGMTVHLEACPHLHRVVQAIKSAGMSA 119
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS-- 171
GVA+NP TPV++L D++ ++D++L+M+VNPGFGGQ+ I + KI+ +++I + ++
Sbjct: 120 GVALNPATPVSLLTDILPDLDLVLLMSVNPGFGGQKFIPQVMRKIKNLRSMIDREGLNVH 179
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+EVDGG+ NI ++ +AGAD +V GS+ F + L
Sbjct: 180 IEVDGGIGLANIDAVYRAGADAMVAGSAVFGALDPTEVLREFAAL 224
>gi|146423288|ref|XP_001487574.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 232
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 83/221 (37%), Positives = 124/221 (56%), Gaps = 9/221 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PSILA+DF+ LG + GA +H DVMDG FVPNIS G +I SLR+
Sbjct: 1 MVKPI-IAPSILASDFAHLGCNCHRMYDNGADWLHIDVMDGHFVPNISMGPPIITSLRNE 59
Query: 61 SD------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S FDCH+M+S + + +A AG D TFH ES+ ++ I + G K
Sbjct: 60 IPRSDTKASFFDCHMMVSEPEKWVPEVAKAGGDQYTFHYESTNDPVALVKLIKSHGMKAA 119
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
A+ P TPV +L + +++DM L+MTV PGFGGQ+ + +PK+ + + ++++V
Sbjct: 120 CAVKPGTPVDVLYPLAEQLDMALVMTVEPGFGGQKFMPEMMPKVEALRKKFPQ--LNIQV 177
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGG+ I + AGA+++V G++ F + + L D
Sbjct: 178 DGGLGKDTIGAAADAGANVIVAGTAVFKASDPLEMIQILRD 218
>gi|190345043|gb|EDK36853.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 232
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 9/221 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PSILA+DF+ LG + GA +H DVMDG FVPNIS G +I SLR+
Sbjct: 1 MVKPI-IAPSILASDFAHLGCNCHRMYDNGADWLHIDVMDGHFVPNISMGPPIITSLRNE 59
Query: 61 SD------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
S FDCH+M+S + + +A AG D TFH ES+ ++ I + G K
Sbjct: 60 IPRSDTKASFFDCHMMVSEPEKWVPEVAKAGGDQYTFHYESTNDPVALVKLIKSHGMKAA 119
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
A+ P TPV +L + +++DM L+MTV PGFGGQ+ + +PK+ + + ++++V
Sbjct: 120 CAVKPGTPVDVLYPLAEQLDMALVMTVEPGFGGQKFMPEMMPKVEALRKKFPQ--LNIQV 177
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGG+ I + AGA+++V G++ F + L D
Sbjct: 178 DGGLGKDTIGAAADAGANVIVAGTAVFKASDPSEMIQILRD 218
>gi|223933770|ref|ZP_03625742.1| Ribulose-phosphate 3-epimerase [Streptococcus suis 89/1591]
gi|223897574|gb|EEF63963.1| Ribulose-phosphate 3-epimerase [Streptococcus suis 89/1591]
Length = 219
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 134/208 (64%), Gaps = 2/208 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ +E+ + K G + +H DVMDG FVPNISFGADV+ ++R +S VF
Sbjct: 5 KIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVPNISFGADVVAAMRPHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ ++HI A AG DI+T H E++ H++ +L+ I A G K GV INP TP+
Sbjct: 65 DCHLMVSNPENHIETFARAGADILTIHAEATVHLQGTLQKIRAAGMKVGVVINPGTPLVT 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V++ +D +L+MTVNPGFGGQ I KI L R + +EVDGG+ + I
Sbjct: 125 IEPVLNLVDQVLLMTVNPGFGGQAYIPEVAEKIEALVKLREARGLNFDIEVDGGIDDKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAK 211
S AGA++ V GS F + + AK
Sbjct: 185 HSAKNAGANVFVAGSYLFKGDLDANVAK 212
>gi|34497637|ref|NP_901852.1| ribulose-phosphate 3-epimerase [Chromobacterium violaceum ATCC
12472]
gi|34103493|gb|AAQ59855.1| ribulose-phosphate 3-epimerase [Chromobacterium violaceum ATCC
12472]
Length = 227
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 135/220 (61%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ +I PSIL+ADF+RLG+E+ ++ AGA IHFDVMD +VPN++ G ++R +S
Sbjct: 1 MRTFRIAPSILSADFARLGQEVKDVVAAGADIIHFDVMDNHYVPNLTMGPMFCEAIRPHS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+ +D+ A AG DIITFHPE S HI R+L I G K G+ NP T
Sbjct: 61 SAPIDVHLMVKPVDALAAAFAKAGADIITFHPEGSEHIDRTLGLIKDAGCKAGLVFNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS------ISLEVD 175
P++ L+ V+D++DMILIM+VNPGFGGQ I + KI+ A+ I + + I LEVD
Sbjct: 121 PLSYLDHVMDKLDMILIMSVNPGFGGQSFIPHALEKIKLARRRIDEYTAKHGGEIWLEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV NI + AGAD V GS+ + QK + +
Sbjct: 181 GGVKVDNIAQVAAAGADTFVAGSAIYGQKDYKAVIDAMRA 220
>gi|317124747|ref|YP_004098859.1| ribulose-5-phosphate 3-epimerase [Intrasporangium calvum DSM 43043]
gi|315588835|gb|ADU48132.1| ribulose-5-phosphate 3-epimerase [Intrasporangium calvum DSM 43043]
Length = 218
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 84/217 (38%), Positives = 125/217 (57%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PSIL+ADF+ L E+ I AGA H DVMD FVPN++ G V+ +L S
Sbjct: 1 MQISPSILSADFANLERELGRI--AGADWAHVDVMDAHFVPNLTLGLPVVEALLKVSPIP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D + A+AGC +TFH E++ R R + A G + +A+ P T A
Sbjct: 59 IDAHLMIEDPDRWAPLYAEAGCQSVTFHIEAARDPRELARRLRASGARAAMAMKPRTAFA 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
ED++ E+DM+L+MTV PGFGGQ + +PK+RQ + + + + +VDGGV++
Sbjct: 119 PYEDLLPELDMVLVMTVEPGFGGQSFMADQMPKVRQVREAVKRHGGEIWVQVDGGVSATT 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ +AGAD+ V GS+ + + + +L L +
Sbjct: 179 IEQCAEAGADVFVAGSAVYGAEDAAAAVDQLRSLVAA 215
>gi|313668359|ref|YP_004048643.1| ribulose-phosphate 3-epimerase [Neisseria lactamica ST-640]
gi|313005821|emb|CBN87275.1| putative ribulose-phosphate 3-epimerase [Neisseria lactamica
020-06]
Length = 227
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 149/226 (65%), Gaps = 8/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-AYRIAPSILSADFARLGEEVANVISAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCRAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ R I++EV
Sbjct: 120 TPVYLLENVLDRLDMVLLMSVNPGFGGQGFIPHTLEKIRRVRAMLDAYEAQSGRHIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
DGG+ + NI ++ AGAD V GS+ F + + + +L K+
Sbjct: 180 DGGIKTDNIAAVAAAGADTFVAGSAIFGKPDYKAVIDAMRVELAKA 225
>gi|330836575|ref|YP_004411216.1| ribulose-5-phosphate 3-epimerase [Spirochaeta coccoides DSM 17374]
gi|329748478|gb|AEC01834.1| ribulose-5-phosphate 3-epimerase [Spirochaeta coccoides DSM 17374]
Length = 224
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 145/223 (65%), Gaps = 4/223 (1%)
Query: 1 MTPS--IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT + + I PSIL ADFS L E++ +I +GA+ +H DVMDG FVPNISFG D+IR+LR
Sbjct: 1 MTKNEDLIIAPSILGADFSHLEEDLVSIADSGAQWVHLDVMDGHFVPNISFGWDLIRTLR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+S FD HLM+S + I A AG + IT H E++ H+ R L+ I ++G K+GV++
Sbjct: 61 PFSPLTFDTHLMVSQPERFIEQFASAGSNAITVHHEATVHLYRVLQQIRSLGCKSGVSVV 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TPV+ +E V++ D++L+M+VNPGFGGQQ+I S + KI + L + VDG
Sbjct: 121 PSTPVSAIEHVLEISDIVLVMSVNPGFGGQQMIPSMLQKIARLAELRETEGYDFLISVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ ++ V +GAD+LV GSSFF+ +ISY L L ++
Sbjct: 181 GINAKTAGDAVDSGADVLVTGSSFFSAPDKISYVADLLSLGRA 223
>gi|300741739|ref|ZP_07071760.1| ribulose-phosphate 3-epimerase [Rothia dentocariosa M567]
gi|300380924|gb|EFJ77486.1| ribulose-phosphate 3-epimerase [Rothia dentocariosa M567]
Length = 239
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADF+ L E+ I + A H DVMD FVPN+++G V++ LR S
Sbjct: 2 SVAINPSILSADFANLKHELERI--STADAAHIDVMDNHFVPNLTWGPPVVKRLREVSPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI D AD G + +TFH E++ + RT+ G K G+A+ P T V
Sbjct: 60 PFDVHLMIDDPDRWAPQYADVGSESVTFHAEAATAPIKLARTLRESGAKAGLALRPATAV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
D++ EIDM+LIMTV PGFGGQ+ ++ T+PKIR+A + + I L+VDGG+T
Sbjct: 120 EPYLDLLTEIDMLLIMTVEPGFGGQKFLDVTLPKIRRAASALEGSGIPVRLQVDGGITEE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGAD V GSS + + + L L +SA
Sbjct: 180 TIVRAAEAGADCFVAGSSVYGAEDPQTAIAALRSLGESA 218
>gi|309378613|emb|CBX22791.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 227
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 105/226 (46%), Positives = 149/226 (65%), Gaps = 8/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-AYRIAPSILSADFARLGEEVANVISAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I +G + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDIGCRAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ R I++EV
Sbjct: 120 TPVYLLENVLDRLDMVLLMSVNPGFGGQGFIPHTLEKIRRVRAMLDAYEAQSGRHIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
DGG+ + NI ++ AGAD V GS+ F + + + +L K+
Sbjct: 180 DGGIKTDNIAAVAAAGADTFVAGSAIFGKPDYKAVIDAMRVELAKA 225
>gi|325915203|ref|ZP_08177526.1| ribulose-5-phosphate 3-epimerase [Xanthomonas vesicatoria ATCC
35937]
gi|325538563|gb|EGD10236.1| ribulose-5-phosphate 3-epimerase [Xanthomonas vesicatoria ATCC
35937]
Length = 223
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 145/220 (65%), Gaps = 6/220 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP TPV I
Sbjct: 66 DVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNPATPVDI 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGGV + NI
Sbjct: 126 LDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRKKIDALGKPIRLEIDGGVKADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 186 GAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVDAV 222
>gi|253575481|ref|ZP_04852818.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845128|gb|EES73139.1| ribulose-phosphate 3-epimerase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 227
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 105/222 (47%), Positives = 141/222 (63%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ PSILAADFS+LG EI KAGA IH DVMDG FVPNI+ G D+I S+R Y
Sbjct: 1 MNKP-KLAPSILAADFSKLGSEIEAADKAGADMIHIDVMDGAFVPNITLGPDIIASVRPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ FD HLMI +I A AG DIIT E+ H+ R+++ I A G K+GVA++P
Sbjct: 60 TNLAFDVHLMIEEPQRYIARFAAAGADIITVQAEACRHLHRTIQEIKASGVKSGVALSPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TP +L+ VI EIDM+L+M+VNPGFGGQ I + + KIR + I + +EVDGG+
Sbjct: 120 TPPDVLDYVIGEIDMVLLMSVNPGFGGQSFIPAVLEKIRAVRKTIDALGVSVDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ +VQAGAD++V GS+ +N +G A R +A
Sbjct: 180 KLSNVGKVVQAGADVIVAGSALYNSEGIGHNAARFRAAMDNA 221
>gi|169629893|ref|YP_001703542.1| ribulose-phosphate 3-epimerase [Mycobacterium abscessus ATCC 19977]
gi|169241860|emb|CAM62888.1| Ribulose-phosphate 3-epimerase [Mycobacterium abscessus]
Length = 227
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSIL+ADF+RL EE++ + GA +H DVMDG FVPN++ G V+ SL + +D
Sbjct: 4 RAPMIAPSILSADFARLAEEMAAVE--GADWLHVDVMDGHFVPNLTLGLPVVDSLLAATD 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLMI + D A+AG +TFH E++ + R I A G K G++I P TP
Sbjct: 62 IPIDCHLMIDNPDRWAPGYAEAGAHNVTFHAEATDNPVGVARDIRAAGAKAGLSIKPGTP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTS 180
+ +V+ + D +L+M+V PGFGGQ I S + K+R + L+ + S+ +E+DGG+ +
Sbjct: 122 LEPYLEVLKDFDTLLVMSVEPGFGGQSFIASVLDKVRAVRKLVDSGELSVLVEIDGGINT 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+ +AG D V GS+ + + + + L +
Sbjct: 182 DTIEQAAEAGVDCFVAGSAVYGAQNPEAAVRALRE 216
>gi|299135639|ref|ZP_07028823.1| ribulose-phosphate 3-epimerase [Acidobacterium sp. MP5ACTX8]
gi|298601763|gb|EFI57917.1| ribulose-phosphate 3-epimerase [Acidobacterium sp. MP5ACTX8]
Length = 247
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 89/219 (40%), Positives = 136/219 (62%), Gaps = 3/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ SILAADF+ L +EI+ + G +H DVMDG FVPNI+FG V++++R +
Sbjct: 2 IELAFSILAADFAHLADEIARAERGGGTIVHVDVMDGHFVPNITFGPPVVKAIRPVTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D I A+AG ++++ H E H+ R+L+ I G GV INP TPV
Sbjct: 62 LDCHLMIEDPDQFIPAFAEAGANMVSVHVEVCRHLNRTLQHIIDHGMGAGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L +V+ + +L+M+VNPGFGGQ+ + ++ +I + L + ++ +EVDGGV
Sbjct: 122 MLIEVLPMVHHVLVMSVNPGFGGQKFLPRSVERIAHLRRLREEMGLNFRIEVDGGVAHDT 181
Query: 183 IKSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLKKSA 220
+ S+V+AGAD+LV GS+ F K E + + L +K+A
Sbjct: 182 VASVVEAGADMLVAGSAIFEKGKTEKNAREFLRIARKAA 220
>gi|83648750|ref|YP_437185.1| ribulose-phosphate 3-epimerase [Hahella chejuensis KCTC 2396]
gi|83636793|gb|ABC32760.1| ribulose-phosphate 3-epimerase [Hahella chejuensis KCTC 2396]
Length = 225
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 141/220 (64%), Gaps = 3/220 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N+ +AGA +HFDVMD +VPN++ G V +LR + +
Sbjct: 6 IAPSILSADFARLGEEVVNVLEAGADIVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I +AG ITFHPE+S HI RSL+ I G K G+ NP +P+
Sbjct: 66 DVHLMVKPVDAMIASFIEAGATYITFHPEASEHIDRSLQLIRDGGCKAGLVFNPASPLHY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
++ V+D++DM+L+M+VNPGFGGQ I +T+ K+R+A+A I + + E+DGGV NI
Sbjct: 126 MDYVMDKLDMVLLMSVNPGFGGQAFIPATLNKLREARAKIDASGLPIRLEIDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + AGAD V GS+ FN + ++ D A ++
Sbjct: 186 REIAAAGADTFVAGSAIFNTDDYAATIAKMRDQIALAQSV 225
>gi|332877535|ref|ZP_08445282.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684641|gb|EGJ57491.1| ribulose-phosphate 3-epimerase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 216
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L E+ I ++ +H D+MDG FVPNISFG V++ + + D
Sbjct: 5 VAPSLLSADFGNLKSEMDMINRSECDWLHIDIMDGVFVPNISFGFPVLKYVARLCEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +N + G + H E+ PH+ R ++ I G K GV +NP TPV+ L
Sbjct: 65 VHLMIVQPEKFLNEVKALGAYSMNVHVEACPHLHRVVQQIKETGMKAGVTLNPATPVSSL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
D+I+++D++++M VNPGFGGQ I T+ K+R+ + +I + +EVDGGV +
Sbjct: 125 TDIIEDVDIVMLMAVNPGFGGQTFIPHTLDKVRELRRMIDGSRSKALIEVDGGVNRDTGR 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV GS+ F+ I + L +L
Sbjct: 185 LLVEAGADVLVAGSAVFHAADAIEEIRVLKNL 216
>gi|188575055|ref|YP_001911984.1| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188519507|gb|ACD57452.1| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 269
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G+ V ++LR +
Sbjct: 47 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKH 105
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 106 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 165
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 166 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 225
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 226 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIVQMRAAVEAV 268
>gi|317057581|ref|YP_004106048.1| ribulose-phosphate 3-epimerase [Ruminococcus albus 7]
gi|315449850|gb|ADU23414.1| ribulose-phosphate 3-epimerase [Ruminococcus albus 7]
Length = 215
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ S+L D + L EI +I KAGA +H DVMDG FV NISFG V++ ++ + D
Sbjct: 5 VSASLLGCDLADLKNEIESIEKAGADWLHCDVMDGVFVNNISFGTPVLKCVKKAAGIPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +I+ A+ G D+ITFH E++ + + IHA GK G++I P TPV+ +
Sbjct: 65 THLMITDPIRYIDDYAELGSDMITFHLEAASDPQAVIDKIHAHGKSAGISIKPGTPVSAV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK---ALIGKRSISLEVDGGVTSRNI 183
+ ++ +DM+L+MTV PGFGGQ+ T+ KI + + +G+ + +EVDGG+ + +
Sbjct: 125 KPYLESVDMVLVMTVEPGFGGQKFNPDTLEKISEIRYLLDSMGRPQVDIEVDGGINGQTV 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K +AGA++ V G+ F + + K L
Sbjct: 185 KLCREAGANVFVSGTYIFGVEDRKAAVKSLK 215
>gi|255629039|gb|ACU14864.1| unknown [Glycine max]
Length = 228
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 124/224 (55%), Gaps = 6/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR +
Sbjct: 1 MGVTPKIAPSMLSSDFANLASEAQRMLHFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINP 119
+ DCHLM+++ ++ +A AG TFH E+S ++ I + G GVA+ P
Sbjct: 61 TKGYLDCHLMVTNPLDYVEPLAKAGASGFTFHVETSKDNWEELIQRIKSHGMTPGVALKP 120
Query: 120 ETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
TP+ + +++ ++M+L+MTV PGFGGQ+ + + K+R + S+ +EVDG
Sbjct: 121 GTPIEEVYPLVEAGNPVEMVLVMTVEPGFGGQKFMPEMMDKVRILRK--KYPSLDIEVDG 178
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G+ I AGA+ +V GSS F + L + + A
Sbjct: 179 GLGPSTIDVAASAGANCIVAGSSVFGAPEPVQVISLLKNSVEKA 222
>gi|330684633|gb|EGG96338.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis VCU121]
Length = 214
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+++PS+L+ DF L +E+ + +AG +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 3 KVLPSLLSVDFLNLKDELVKLEEAGVDGLHFDVMDGQFVPNISIGIPILDAVRQQSKLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I + AD G D+I+ H E++ HI R++ I GKK GV INP TPV+
Sbjct: 63 DVHLMIENPEQYIELFADHGADLISVHLEATAHIHRAIEQIKNKGKKAGVVINPGTPVSQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+ +I+ +D +LIMTVNPGFGGQ IE + K+ + L ++ + +EVDGG+ +
Sbjct: 123 ILPIINTVDYVLIMTVNPGFGGQSFIEDCVDKVLELNTLKNEKQLTFDIEVDGGINAETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+ GA +LV GS FF Q + ++L
Sbjct: 183 EVCVKNGATMLVTGSYFFKQDDYQAVTQKLK 213
>gi|326800483|ref|YP_004318302.1| ribulose-phosphate 3-epimerase [Sphingobacterium sp. 21]
gi|326551247|gb|ADZ79632.1| ribulose-phosphate 3-epimerase [Sphingobacterium sp. 21]
Length = 223
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 147/219 (67%), Gaps = 2/219 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L +I + K+ A IH D+MDG FVPNISFG V+++++ ++ D
Sbjct: 5 VAPSILSADFANLQRDIEMLNKSDADWIHVDIMDGVFVPNISFGFPVVKAVKQHALKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++N +AG + I+ H E+ H+ R+++ I +G + GVAINP TP+A L
Sbjct: 65 VHLMIVDPDRYLNEFKEAGANNISVHFEACIHLHRTIQKIKELGCRAGVAINPHTPIAQL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK--ALIGKRSISLEVDGGVTSRNIK 184
D++++ID++ +M+VNPGFGGQ+ IEST +IR+ + A ++ +E+DGGV +N
Sbjct: 125 SDIVEDIDLVCMMSVNPGFGGQKFIESTYRRIRELRLLAQDRNPNLLIEIDGGVNHQNSL 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
SL+QAGA++LV G++ F +++ K+L D+ + A+
Sbjct: 185 SLLQAGANVLVAGNTVFGADDQMASIKQLKDVSITRKAV 223
>gi|282859690|ref|ZP_06268791.1| ribulose-phosphate 3-epimerase [Prevotella bivia JCVIHMP010]
gi|282587501|gb|EFB92705.1| ribulose-phosphate 3-epimerase [Prevotella bivia JCVIHMP010]
Length = 216
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 128/215 (59%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PS+L+ADF L ++I I + A +H DVMDG FVPNISFG V++++
Sbjct: 2 SVIVSPSLLSADFLHLDKDIEMINNSDADWLHMDVMDGSFVPNISFGFPVMKAVGKALKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I AD G I+ H E+ H+ R+L+ I A G K GV +NP TPV
Sbjct: 62 PMDVHLMIECPEKYIQQTADCGAAIMNVHYEACVHLHRTLQAIKAAGMKAGVTLNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+LED+I +ID++ +M+VNPGFGGQ I + K+++ KALI K + +EVDGGV
Sbjct: 122 NVLEDIIGDIDIVQLMSVNPGFGGQSFITHAVKKVQKLKALIEKEQCNTLIEVDGGVNGE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AG D+LV GS F K + L L
Sbjct: 182 TAPLLVNAGTDILVSGSYIFGSKDPYATIAALKGL 216
>gi|88658377|ref|YP_506912.1| ribulose-phosphate 3-epimerase [Ehrlichia chaffeensis str.
Arkansas]
gi|88599834|gb|ABD45303.1| ribulose-phosphate 3-epimerase [Ehrlichia chaffeensis str.
Arkansas]
Length = 228
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 140/215 (65%), Gaps = 2/215 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+++ SIL+ADF+ LG+ + +T AG IH DVMDG FVPNI+ G V+ +++ Y+
Sbjct: 12 KVVEVSSSILSADFANLGKSVEMLTDAGVDYIHVDVMDGNFVPNITIGPVVVSAIKKYTT 71
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLMI+S ++I DAG D+IT H ES H+ R ++ I + K G+++ P +
Sbjct: 72 IPFDVHLMINSPGNYIEAFVDAGADMITIHAESDIHLDRIIQKIKSYKKSAGLSLVPTSH 131
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
ILE +I E+D++LIMTVNPGFGGQQ I S + KI + LI K S+ + VDGGV
Sbjct: 132 YNILEYIIFELDLVLIMTVNPGFGGQQFITSQLDKISCVRNLIEKYSLKTKIAVDGGVNI 191
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+N KS+++AGAD+LVVGS+ FN + Y ++L
Sbjct: 192 KNAKSVIEAGADILVVGSAIFNANNMLDYVQQLKS 226
>gi|303237252|ref|ZP_07323822.1| ribulose-phosphate 3-epimerase [Prevotella disiens FB035-09AN]
gi|302482639|gb|EFL45664.1| ribulose-phosphate 3-epimerase [Prevotella disiens FB035-09AN]
Length = 217
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L ++I I + + IH DVMDG FVPNISFG V++++ D
Sbjct: 5 VSPSLLSADFLHLDKDIEMINNSDSDYIHMDVMDGMFVPNISFGFPVLKAVGKACKKPMD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI +++I ADAG +I+T H E+ PH+ R+++ I G K GVAINP TPV++L
Sbjct: 65 VHYMIMHPENYIQQTADAGAEIMTVHYETCPHLHRTIQQIKQAGMKAGVAINPATPVSVL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
ED+++++D++LIM+VNPGFGGQ IE+ I K+++ + LI + + +EVDGGV +
Sbjct: 125 EDIVEDVDLVLIMSVNPGFGGQSFIENAISKVKRLRKLIDESNSHALIEVDGGVQNETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+ G D+LV GS F I + L L
Sbjct: 185 RLVEVGTDILVSGSYVFKSANPIETIRGLKVL 216
>gi|226949855|ref|YP_002804946.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A2 str.
Kyoto]
gi|226842579|gb|ACO85245.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A2 str.
Kyoto]
Length = 216
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 103/213 (48%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E+ HI R++ I ++G K VA+NP T ++
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ K L K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKVLSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + GADLLV GS+ F K L +
Sbjct: 182 IKEIADCGADLLVAGSAVFKNGEIEKNIKVLRE 214
>gi|324989786|gb|EGC21729.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK353]
Length = 219
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 132/206 (64%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFG V+ S+R +
Sbjct: 1 MT-SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGTGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP
Sbjct: 60 SKLVFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TPV +++V++ +D +L+MTVNPGFGGQ + T+ KIR+ L + + +EVDGG+
Sbjct: 120 TPVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELAVLREVNQLNFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I +AGA++ V GS F
Sbjct: 180 DDKTIGIAKEAGANVFVAGSYVFKGD 205
>gi|188580200|ref|YP_001923645.1| ribulose-phosphate 3-epimerase [Methylobacterium populi BJ001]
gi|179343698|gb|ACB79110.1| Ribulose-phosphate 3-epimerase [Methylobacterium populi BJ001]
Length = 227
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 109/207 (52%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADFSRLGEE I +AGA IH DVMDG FVPNISFG V+++LR ++D VFD
Sbjct: 4 LAPSILAADFSRLGEETRAIAQAGADWIHLDVMDGHFVPNISFGPAVVKALRPWTDKVFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ++ A+AG D IT H E+ PHI RSL+TI +GK+ GVA+NP TP +++
Sbjct: 64 VHLMIAPADPYLAAFAEAGADAITVHVEAGPHIHRSLQTIRGLGKRAGVALNPGTPASMI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E V+D +D++L+MTVNPGFGGQ I S + I + KA+ R I + VDGG+T+
Sbjct: 124 EPVLDMVDLVLVMTVNPGFGGQSFIGSALETIARVKAMTAGRDIDISVDGGITAETAGPA 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRL 213
QAGA++LV GS+ F G Y K +
Sbjct: 184 AQAGANILVAGSAAFKG-GPDHYEKNV 209
>gi|34556662|ref|NP_906477.1| ribulose-phosphate 3-epimerase [Wolinella succinogenes DSM 1740]
gi|34482376|emb|CAE09377.1| RIBULOSE-PHOSPHATE 3-EPIMERASE PENTOSE-5-PHOSPHATE 3-EPIMERASE PPE
R5P3E [Wolinella succinogenes]
Length = 213
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 80/212 (37%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L E+ +I +AG +H DVMDG FVPN++ G V+++++ +
Sbjct: 1 MLVAPSILSADFGKLSLEVGSICEAGCDYVHVDVMDGHFVPNLTMGPLVVQAVKKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A + ++FH E H+ R ++ G + VA+NP T +
Sbjct: 61 LDIHLMVQNNPFFVDLFAPLEPEFLSFHIEEEKHLHRLIQQTRKHGIRPAVALNPHTDES 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+LE ++ +IDM+L+M+VNPGFGGQ+ I S + KIR+ K I +R+ +EVDGGV+ +N
Sbjct: 121 LLEYILSDIDMVLVMSVNPGFGGQKFIPSALEKIRRLKERIERRNPSCLIEVDGGVSDQN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +L +AG D++V GS F + L
Sbjct: 181 IHALKEAGVDMVVAGSYLFGSPDYRAAIASLR 212
>gi|315224610|ref|ZP_07866435.1| ribulose-phosphate 3-epimerase [Capnocytophaga ochracea F0287]
gi|314945395|gb|EFS97419.1| ribulose-phosphate 3-epimerase [Capnocytophaga ochracea F0287]
Length = 216
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 142/219 (64%), Gaps = 5/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+LAADF L + + + + A H D+MDG FVPNIS+G V+ + ++
Sbjct: 1 MILAPSLLAADFGNLQQAVEMVNASEADWFHIDIMDGVFVPNISYGMPVLSVIHKHATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I+ A G DI+T H E H+ R+++ I A G K GVA+NP TPVA
Sbjct: 61 LDVHLMIIDPDRYISTFAKLGSDILTVHYEVCTHLHRTIQAIKAEGMKAGVALNPHTPVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+LEDVI +ID++L+M+VNPGFGGQ IE+T K+RQAKALI + +E+DGGV+ +N
Sbjct: 121 LLEDVIQDIDVLLLMSVNPGFGGQSFIENTYKKVRQAKALIEQVGAHALIEIDGGVSLKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
K+LV+AGAD LV GS FN + + +LKK+ L
Sbjct: 181 AKALVEAGADALVAGSFIFNATNPT---QTIAELKKTVL 216
>gi|160932347|ref|ZP_02079738.1| hypothetical protein CLOLEP_01183 [Clostridium leptum DSM 753]
gi|156868949|gb|EDO62321.1| hypothetical protein CLOLEP_01183 [Clostridium leptum DSM 753]
Length = 236
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+LA DF+ + +EI +T+ GA IH DVMDG FVPNISFG VI+++R Y+D
Sbjct: 23 MKVSPSVLACDFAHMADEIQKVTQGGADYIHLDVMDGNFVPNISFGPAVIKAIRPYTDVP 82
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + DAG D ITFH E+ P+I +L I G ++I P T
Sbjct: 83 FDVHLMVERPSRYFQDYLDAGADNITFHLEAEPYIAPALDQIRKAGCSASLSIKPGTEAE 142
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +D++ M+L+MTV PGFGGQ+LI + K+++ KA +R + +EVDGG+ S
Sbjct: 143 AVFPYLDKLYMVLVMTVEPGFGGQKLIPECLEKVKKIKAEAKRRGLKVLVEVDGGINSET 202
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
AG D+ V G+ F + K L +
Sbjct: 203 AHEAAAAGVDVCVAGTGVFRAPDVAAAIKELQN 235
>gi|21111443|gb|AAM39774.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572141|gb|AAY47551.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 233
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE+ N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 11 MQPTA-IAPSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRLVPDFADAGATTISFHPEASRHVHRTIQLIRSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDALGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN Y++ + ++ + A
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAPD---YSQIIAQMRAAVDAA 232
>gi|226306506|ref|YP_002766466.1| ribulose-5-phosphate 3-epimerase [Rhodococcus erythropolis PR4]
gi|226185623|dbj|BAH33727.1| ribulose-5-phosphate 3-epimerase [Rhodococcus erythropolis PR4]
Length = 227
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 124/222 (55%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF+RL +E + + +G+ +H DVMD FVPN++ G V+ SL
Sbjct: 1 MASPM-IAPSILSADFARLADEATAV--SGSDWLHVDVMDAHFVPNLTLGLPVVESLLKA 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D DCHLMI + + A+AG +TFH E++ R R I A G K G++I P
Sbjct: 58 TDIPLDCHLMIENPERWAPPYAEAGAYNVTFHAEATDDPRSVARDIRAAGAKAGLSIKPG 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TP+ +++ + D +LIM+V PGFGGQ + + K R + L+ + ++ +E+DGG+
Sbjct: 118 TPIDDYLEILKDFDTLLIMSVEPGFGGQSFMPQVLDKARAVRKLVDSGELTLLVEIDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I+ +AG D V GS+ + ++L SA
Sbjct: 178 NASTIEQAAEAGIDCFVAGSAVYGASDPGEAVRKLRAQAASA 219
>gi|256819178|ref|YP_003140457.1| ribulose-phosphate 3-epimerase [Capnocytophaga ochracea DSM 7271]
gi|256580761|gb|ACU91896.1| ribulose-phosphate 3-epimerase [Capnocytophaga ochracea DSM 7271]
Length = 216
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 101/219 (46%), Positives = 143/219 (65%), Gaps = 5/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+LAADF L + + + + A H D+MDG FVPNIS+G ++ + ++
Sbjct: 1 MILAPSLLAADFGNLQQAVEMVNASEADWFHIDIMDGVFVPNISYGMPILSVIHKHATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +I+ A G DI+T H E+ H+ R+++ I A G K GVA+NP TPVA
Sbjct: 61 LDVHLMIIDPDRYISTFAKLGSDILTVHYEACTHLHRTIQAIKAEGMKAGVALNPHTPVA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
+LEDVI +ID++L+M+VNPGFGGQ IE+T K+RQAKALI + +E+DGGV+ +N
Sbjct: 121 LLEDVIQDIDVLLLMSVNPGFGGQSFIENTYKKVRQAKALIEQVEAHALIEIDGGVSLKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
K+LV+AGAD LV GS FN + + +LKK+ L
Sbjct: 181 AKALVEAGADALVAGSFIFNATNPT---QTIAELKKTVL 216
>gi|322436943|ref|YP_004219155.1| ribulose-phosphate 3-epimerase [Acidobacterium sp. MP5ACTX9]
gi|321164670|gb|ADW70375.1| ribulose-phosphate 3-epimerase [Acidobacterium sp. MP5ACTX9]
Length = 226
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 87/221 (39%), Positives = 127/221 (57%), Gaps = 2/221 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ SILA+DF+ L +EI+ + G +H DVMDG FVPNI+FG V+ ++R +
Sbjct: 2 IELAFSILASDFAHLADEIATAERGGGTIVHVDVMDGHFVPNITFGPPVVAAIRPLTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + DS I A AG DI+ H E H+ R+L+ I G + V INP TPV
Sbjct: 62 LDCHLMIENPDSFIEDFAKAGADILCVHQEVCRHLHRTLQLIQQHGCQPAVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L +V+ + +L+M+VNPGFGGQ+ + + KI L + ++ +EVDGGV
Sbjct: 122 TLIEVLPMLHHVLVMSVNPGFGGQKFLPLALDKIEHLAELREEMGLNFRIEVDGGVAHDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ +V+AGAD+LV GS+ F + + + A A
Sbjct: 182 VARVVEAGADMLVAGSAIFAPGDPARTEQNAREFLRLARAA 222
>gi|91976249|ref|YP_568908.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris BisB5]
gi|91682705|gb|ABE39007.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris BisB5]
Length = 232
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 106/216 (49%), Positives = 147/216 (68%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + +AG IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 7 RPLVIAPSILASDFSKLGEEVRAVDQAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTK 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VFD HLMI+ D + A AGCDIIT H E+ PH+ RSL+ I A+GKK GV++NP T
Sbjct: 67 KVFDAHLMIAPCDPFLEAFAKAGCDIITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTH 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +E V+D+ID++L+M+VNPGFGGQ I S + KIRQ +A++ R I +EVDGGV+ +
Sbjct: 127 PSAIEYVLDDIDLVLVMSVNPGFGGQAFIPSAVEKIRQVRAMVAGRPIDIEVDGGVSDKV 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L AGA+ V GS+ F SY ++ ++
Sbjct: 187 AGQLAAAGANAFVAGSAVFKGGTVESYKANISGIRN 222
>gi|238924689|ref|YP_002938205.1| ribulose-phosphate 3-epimerase [Eubacterium rectale ATCC 33656]
gi|238876364|gb|ACR76071.1| ribulose-phosphate 3-epimerase [Eubacterium rectale ATCC 33656]
Length = 216
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+AD+S LGE++ + +AGA+ +H DVMDG FVP+IS G VI+++R ++ +FD
Sbjct: 4 LSPSILSADYSILGEQLKQLDEAGAQYVHIDVMDGSFVPSISIGLPVIKTIRKCTERMFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +I+ A AG DIIT H E+ H+ R++ I G GVA+NP TP++ +
Sbjct: 64 VHLMIDEPVRYIDDFAAAGADIITVHAEACKHLDRTIEAIKEKGILAGVALNPATPLSAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E V+ ++DM+LIMTVNPGFGGQ+LI T+ K+R KAL+ K +EVDGGV N++
Sbjct: 124 EYVLPKVDMVLIMTVNPGFGGQKLIPYTVDKVRDLKALLEKTANKADIEVDGGVNLENVE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+L+ AGA+++V GS+ F+ E + LN +
Sbjct: 184 TLLAAGANIIVAGSAVFSGDIEENVKGFLNIM 215
>gi|325697396|gb|EGD39282.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK160]
Length = 219
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 93/206 (45%), Positives = 133/206 (64%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +
Sbjct: 1 MT-SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K + INP
Sbjct: 60 SKLVFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSLVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGV 178
TPV +++V++ +D +L+MTVNPGFGGQ + T+ KIR+ + + + +EVDGG+
Sbjct: 120 TPVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I +AGA++ V GS F
Sbjct: 180 DDKTIGIAKEAGANVFVAGSYVFKGD 205
>gi|326386181|ref|ZP_08207805.1| ribulose-5-phosphate 3-epimerase [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209406|gb|EGD60199.1| ribulose-5-phosphate 3-epimerase [Novosphingobium nitrogenifigens
DSM 19370]
Length = 220
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 112/221 (50%), Positives = 149/221 (67%), Gaps = 4/221 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSIL+ADF+RLGEE+ I AGA IH DVMDG FVPNI+ G V+++LR +
Sbjct: 1 MTVPL-ISPSILSADFARLGEEVRAIDAAGADWIHVDVMDGHFVPNITIGPAVVKALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMIS +D+++ A AG DIIT HPE+ PH R+++ I A+GKK GV++NP
Sbjct: 60 TTKPFDVHLMISPVDTYLEAFAAAGADIITVHPEAGPHTHRTVQAIKALGKKAGVSLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP +L+ +IDEID++LIM+VNPGFGGQ I S + KI + +I K R I LEVDGGV
Sbjct: 120 TPAKMLDYLIDEIDLVLIMSVNPGFGGQSFISSQLRKIEAVRKMIDKTGRDIHLEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + AGAD+LV G++ F G YA + LK +
Sbjct: 180 DQTTAAACIAAGADVLVAGTASFRG-GPDHYAANIAALKGA 219
>gi|290968501|ref|ZP_06560040.1| ribulose-phosphate 3-epimerase [Megasphaera genomosp. type_1 str.
28L]
gi|290781497|gb|EFD94086.1| ribulose-phosphate 3-epimerase [Megasphaera genomosp. type_1 str.
28L]
Length = 215
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 136/214 (63%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSIL+ADF++L EEI ++ K GA+ IH D+MDG FVPN++FG V++++R Y+
Sbjct: 2 ITVCPSILSADFAKLAEEIQDVEKKGARCIHLDLMDGHFVPNLTFGIPVVQAVRKYTQLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ +++I+ +A AG +T H E+ H+ R L+ IH K GVA+NP TPV
Sbjct: 62 FDAHLMVEHPETYIDGLAAAGVTYVTVHQEACVHLDRVLQAIHDAHMKAGVALNPATPVT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSR 181
LE V ++D+ILIM+VNPGFGGQ+ + + KI+QA+AL+ +++VDGG+ +
Sbjct: 122 TLEWVAAQVDLILIMSVNPGFGGQRFLPYAVEKIKQARALLDASGNTCAAVQVDGGINRK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
S+ AGA LV GS+ F + L
Sbjct: 182 TAPSVKAAGATFLVAGSAIFGASDRAEIIRFLQA 215
>gi|317131045|ref|YP_004090359.1| ribulose-phosphate 3-epimerase [Ethanoligenens harbinense YUAN-3]
gi|315469024|gb|ADU25628.1| ribulose-phosphate 3-epimerase [Ethanoligenens harbinense YUAN-3]
Length = 214
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 84/213 (39%), Positives = 125/213 (58%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS LGEE+ I AGA +H DVMDG FVPN++FG V+R+LR +
Sbjct: 2 VKIAPSILSADFSCLGEELQKIEAAGADLVHIDVMDGHFVPNLTFGPPVVRALRGCTPLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ S + DAG D +T H E+ + L +H G +++ P TP
Sbjct: 62 FDVHLMMDDPGSLLGAFLDAGADSVTLHIEACKQPQALLNRLHEAGVGAALSVKPGTPAE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+ +D++ M+L+MTV PGFGGQ+LI T+ K + +R + +EVDGG+ ++
Sbjct: 122 TVFPFLDQLSMVLVMTVEPGFGGQKLIPETLRKAAAIRQECARRGLALDIEVDGGINAQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ VQ+GA++LV GS+ F + + L
Sbjct: 182 AVNAVQSGANVLVAGSAVFGAADMAAAIRTLRA 214
>gi|332360007|gb|EGJ37821.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1056]
Length = 219
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +
Sbjct: 1 MT-SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP
Sbjct: 60 SKLVFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGV 178
TPV +++V++ +D +L+MTVNPGFGGQ + T+ KIR+ + + + +EVDGG+
Sbjct: 120 TPVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I +AGA++ V GS F
Sbjct: 180 DDKTIGIAKEAGANVFVAGSYVFKGD 205
>gi|167760438|ref|ZP_02432565.1| hypothetical protein CLOSCI_02812 [Clostridium scindens ATCC 35704]
gi|167661937|gb|EDS06067.1| hypothetical protein CLOSCI_02812 [Clostridium scindens ATCC 35704]
Length = 221
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PSILAADF LG+E+ + GA+ +HFDVMDG FVP+ISFG V+ S++ +
Sbjct: 3 EYILAPSILAADFKNLGQEMKKTEENGARYLHFDVMDGMFVPSISFGMPVLASVKGGTSQ 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ ++ AG DI+T H E+ ++ ++ I G K G++I PET
Sbjct: 63 TMDVHLMVQEPIRYVEAFQKAGADILTVHLEACEDVKTTIDKIRECGMKVGLSICPETET 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
L+ ++++DMIL+M+V+PGFGGQ+ I ++ KIR+ + +I ++ + +EVDGG+
Sbjct: 123 EALKPFLEDVDMILVMSVHPGFGGQKFIPESLDKIRKVRGMIEEQGLSVDVEVDGGIYLT 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N++ +++AG +++V GS+ F + + + + L+
Sbjct: 183 NVREVLEAGVNVVVAGSAVFKGEPGQNTKEFMEILR 218
>gi|210617182|ref|ZP_03291449.1| hypothetical protein CLONEX_03671 [Clostridium nexile DSM 1787]
gi|210149457|gb|EEA80466.1| hypothetical protein CLONEX_03671 [Clostridium nexile DSM 1787]
Length = 219
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 142/216 (65%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSILAADF LG+EI I + GA+ +HFDVMDG FVP+ISFG V+ S+R + V
Sbjct: 2 MILAPSILAADFKELGKEIQTIEENGAQYLHFDVMDGMFVPSISFGVPVLESIRPTTKLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM++ ++ A AG D+IT H E+ I ++ I A G K GV+I P+TPV
Sbjct: 62 CDAHLMVTEPIRYVEAFAKAGADLITVHLEACEDINATIEKIRACGCKVGVSICPDTPVI 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+++++ ++DMILIM+V+PGFGGQ I ++ KIR+ KA+I + ++VDGG+ + N
Sbjct: 122 SVKNLLKKVDMILIMSVHPGFGGQAFIPESLDKIRELKAMIDTEGLCVDIQVDGGIYTHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ +++AGA+++V GS+ F + + L LK+
Sbjct: 182 VEEVIEAGANVIVAGSAIFKGDTANNTKEMLEILKR 217
>gi|125718903|ref|YP_001036036.1| Pentose-5-phosphate-3-epimerase [Streptococcus sanguinis SK36]
gi|323350563|ref|ZP_08086225.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis VMC66]
gi|125498820|gb|ABN45486.1| Pentose-5-phosphate-3-epimerase, putative [Streptococcus sanguinis
SK36]
gi|322123245|gb|EFX94930.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis VMC66]
gi|324992520|gb|EGC24441.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK405]
gi|324995951|gb|EGC27862.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK678]
gi|325688929|gb|EGD30937.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK115]
gi|327460744|gb|EGF07079.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1]
gi|327472465|gb|EGF17896.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK408]
gi|332358475|gb|EGJ36300.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK49]
gi|332365151|gb|EGJ42914.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK1059]
Length = 219
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +
Sbjct: 1 MT-SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP
Sbjct: 60 SKLVFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGV 178
TPV +++V++ +D +L+MTVNPGFGGQ + T+ KIR+ + + + +EVDGG+
Sbjct: 120 TPVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I +AGA++ V GS F
Sbjct: 180 DDKTIGIAKEAGANVFVAGSYVFKGD 205
>gi|282889776|ref|ZP_06298315.1| hypothetical protein pah_c004o154 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500350|gb|EFB42630.1| hypothetical protein pah_c004o154 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 237
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 126/230 (54%), Gaps = 19/230 (8%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSIL+ADF R+ +E + AGA IH D+MDG FVPN++ G ++ ++ +
Sbjct: 5 SLKIAPSILSADFGRMADEALRLEDAGADFIHIDIMDGNFVPNLTMGPKMVAAINRATSV 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +I +AG D++TFH E++ + +L I K G+A +PET +
Sbjct: 65 FLDVHLMVYHPFDYIERFVEAGADMLTFHFEATEDVEETLAYIRKCNIKAGLAFSPETSL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI------------- 170
+++ +D+ DMIL+MTVNPGFGGQ+ + + K+ + + K +I
Sbjct: 125 SMIPKYLDKCDMILLMTVNPGFGGQEFMPEVLEKVEFTRDICNKLNICEGGKYAPEGADP 184
Query: 171 ------SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+EVDGG+ + + V AGA++LV GS FN + + L
Sbjct: 185 ATIKPFLIEVDGGINPQTAELCVNAGANVLVSGSYLFNAPDLKTAVESLR 234
>gi|310817103|ref|YP_003965067.1| ribulose-phosphate 3-epimerase [Ketogulonicigenium vulgare Y25]
gi|308755838|gb|ADO43767.1| ribulose-phosphate 3-epimerase [Ketogulonicigenium vulgare Y25]
Length = 229
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 143/227 (62%), Gaps = 5/227 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT S +I PSIL+ADF+ G EI + GA +H DVMDG FVPNI+FGA + R
Sbjct: 1 MTFDRSPKIAPSILSADFANFGAEIRAVEDQGADWVHVDVMDGHFVPNITFGAVAAAAFR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ +V D HLM++ D I A AG D+IT HPES PHI R+L++I G K G+A+N
Sbjct: 61 PHIRTVMDVHLMVARPDDWIADFARAGADVITVHPESGPHIHRTLQSIRKAGAKAGLALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T + ++ ++D+ID+I +M+VNPGFGGQ I + +P+I +A+IG R I +EVDGGV
Sbjct: 121 PGTGLDGVQWLLDDIDLICVMSVNPGFGGQSFIPAALPRIAALRAMIGDRPIHIEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKKSALA 222
N +++ AGAD+LV GS+ F Y + + L+ +A +
Sbjct: 181 VPDNAGAIIAAGADVLVAGSAVFKGGSTAAPEVYGRNIAALRAAARS 227
>gi|189346012|ref|YP_001942541.1| Ribulose-phosphate 3-epimerase [Chlorobium limicola DSM 245]
gi|189340159|gb|ACD89562.1| Ribulose-phosphate 3-epimerase [Chlorobium limicola DSM 245]
Length = 221
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 143/214 (66%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L I+ KAGA +H DVMDG FVPNISFG +++++ + +D++ D
Sbjct: 8 LAPSILSADFTELRSSIALADKAGADWMHCDVMDGVFVPNISFGPFIVQAVAACTDTIID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D I AG IT H E+ PH+ R+++ I ++G K GV+INP TPV++L
Sbjct: 68 THLMITDPDRFIADFIKAGSHQITVHQEACPHLHRTIQYIKSLGAKAGVSINPATPVSVL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E ++ ++D++L+M+VNPGFGGQ+ I S++ KI + + + + + + VDGGVT N +
Sbjct: 128 ESILPDLDLVLLMSVNPGFGGQKFIPSSLEKIAKLNVMRQEMNPQMVIAVDGGVTEENAE 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
S+V+AGAD L+ G++FF ++ A ++ +
Sbjct: 188 SVVKAGADSLIAGTAFFKAADPVATAAKIKAFAR 221
>gi|325695465|gb|EGD37365.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK150]
Length = 219
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 134/206 (65%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +
Sbjct: 1 MT-SFKIAPSILSADYANFEAELRKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP
Sbjct: 60 SKLVFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGV 178
TPV ++++V++ +D +L+MTVNPGFGGQ + T+ KIR+ + + + +EVDGG+
Sbjct: 120 TPVEVVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I +AGA++ V GS F
Sbjct: 180 DDKTIGIAKEAGANVFVAGSYVFKGD 205
>gi|329960185|ref|ZP_08298627.1| ribulose-phosphate 3-epimerase [Bacteroides fluxus YIT 12057]
gi|328532858|gb|EGF59635.1| ribulose-phosphate 3-epimerase [Bacteroides fluxus YIT 12057]
Length = 216
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L ++ I ++ A+ IH D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFGYLARDLEMINQSEAQWIHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLMI + I + G I+ H E+ PH+ R ++ I G + V INP
Sbjct: 59 AEKPLDVHLMIVQPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPVA+L+D+I ++ M+LIM+VNPGFGGQ+ IE ++ K+R+ + LI +EVDGGV
Sbjct: 119 TPVAMLKDIIRDVYMVLIMSVNPGFGGQKFIEHSVEKVRELRELITLTGSQALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L++AGAD LV G++ F+ + L +L
Sbjct: 179 NLDTGARLIEAGADALVAGNAVFSAPDPEEAIRALRNL 216
>gi|325686616|gb|EGD28642.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK72]
Length = 219
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +
Sbjct: 1 MT-SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP
Sbjct: 60 SKLVFDCHLMVSNPEHHIEEFARAGADIISIHVEATPHIHGALQKIRAAGVKPSVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGV 178
TPV +++V++ +D +L+MTVNPGFGGQ + T+ KIR+ + + + +EVDGG+
Sbjct: 120 TPVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I +AGA++ V GS F
Sbjct: 180 DDKTIGIAKEAGANVFVAGSYVFKGD 205
>gi|319955909|ref|YP_004167172.1| ribulose-5-phosphate 3-epimerase [Nitratifractor salsuginis DSM
16511]
gi|319418313|gb|ADV45423.1| ribulose-5-phosphate 3-epimerase [Nitratifractor salsuginis DSM
16511]
Length = 213
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 84/215 (39%), Positives = 128/215 (59%), Gaps = 4/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF+ LGEE+ ++ AGA IH DVMDG FVPN++ G V+ + S
Sbjct: 1 MLVAPSILSADFAYLGEEVRSVCDAGADLIHVDVMDGHFVPNMTIGPVVVEGVARSSTKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A + I+FH ES H R I +G + + +NP T
Sbjct: 61 LDVHLMVEDNNFFVDLFAPLKPEFISFHFESERHPNRLATKIRDLGIRPSLVLNPHTLPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ E ++ +DM+L+M+VNPGFGGQ+ I + + ++ K LI KR+ +EVDGGV+ +N
Sbjct: 121 VTEYLLPYLDMVLLMSVNPGFGGQKFIPDVVERAKRLKDLIEKRNPDCLIEVDGGVSDQN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I +L +AG D++V GS F K Y + + LK
Sbjct: 181 IGALKEAGVDVVVAGSYVF--KNPKGYKEAIASLK 213
>gi|260794703|ref|XP_002592347.1| hypothetical protein BRAFLDRAFT_240147 [Branchiostoma floridae]
gi|229277565|gb|EEN48358.1| hypothetical protein BRAFLDRAFT_240147 [Branchiostoma floridae]
Length = 228
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL AD S L E + GA +H DVMDG FVPN++FG V++SLR +SD+
Sbjct: 6 SCKIGPSILNADLSNLASEARRLMDCGADYLHLDVMDGHFVPNMTFGHPVVKSLRQHSDA 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H+M++ + I ++DA ++ TFH E++ ++ +R + G + G+ + P+TPV
Sbjct: 66 FFDMHMMVNRPEQWIEGMSDARANLFTFHIEATDDVKGCIRKVKEAGMQVGIGLKPKTPV 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ ++++DM+L+MTV PGFGGQ+ + +PK++ +A +S+ +EVDGGV I
Sbjct: 126 EVVFPYVEDVDMVLVMTVEPGFGGQKFMADMMPKVQALRA--KYKSLDIEVDGGVGPSTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+AGA+++V G++ +L
Sbjct: 184 DLAAEAGANMIVSGTAVVRSDNPRDVIGQLR 214
>gi|77747748|ref|NP_635850.2| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|77761087|ref|YP_241571.2| ribulose-phosphate 3-epimerase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 223
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 147/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE+ N+ KAGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MQPTA-IAPSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYVPNLTIGPMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRLVPDFADAGATTISFHPEASRHVHRTIQLIRSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R ++ I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRSKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN Y++ + ++ + A
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAPD---YSQIIAQMRAAVDAA 222
>gi|309389029|gb|ADO76909.1| ribulose-5-phosphate 3-epimerase [Halanaerobium praevalens DSM
2228]
Length = 218
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 137/216 (63%), Gaps = 4/216 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PS+LAADFS+L +E+ I K A +H DVMDG +VPNISFG+ +I+++R ++
Sbjct: 2 KTEFAPSLLAADFSQLKKELQLIEK--ADYLHLDVMDGVYVPNISFGSGIIKAIREQTEL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI+ + +I A++G DI+T H E++ HI R ++ I G K GV++NP T +
Sbjct: 60 KFDTHLMITKPERYIKDFAESGSDILTVHLEATDHIHRVIQMIKNEGLKAGVSLNPATSL 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
LE ++ E+D +LIM+VNPGFGGQ I KI + K +I + + +EVDGG+ +
Sbjct: 120 NTLEYILPELDQVLIMSVNPGFGGQSYIPQMTAKISKLKKIIEENNYQCKIEVDGGIKAH 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N++ +V+AGAD++V GS+ F + + +
Sbjct: 180 NLEKIVKAGADIIVAGSAIFGAEDPAQALAEMRGIA 215
>gi|329957241|ref|ZP_08297761.1| ribulose-phosphate 3-epimerase [Bacteroides clarus YIT 12056]
gi|328522954|gb|EGF50057.1| ribulose-phosphate 3-epimerase [Bacteroides clarus YIT 12056]
Length = 216
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 127/218 (58%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ L +I I + A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFAYLANDIEMINGSEADWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLMI + I + G I+ H E+ PH+ R ++ I G V INP
Sbjct: 59 TEKPLDVHLMIVQPEKFIPEVKALGARIMNVHYEACPHLHRVVQQIREAGMLPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L D+ID++ M+LIM VNPGFGGQ+ IE T+ K+R+ + LI +EVDGGV
Sbjct: 119 TPVAMLRDIIDDVYMVLIMGVNPGFGGQKFIEHTVDKVRELRELITVTGSEALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGA+ LV G++ F+ + L +L
Sbjct: 179 NLETGARLVEAGANALVAGNAVFSAPDPAEAIRALKNL 216
>gi|192292706|ref|YP_001993311.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris TIE-1]
gi|192286455|gb|ACF02836.1| Ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris TIE-1]
Length = 232
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 105/219 (47%), Positives = 149/219 (68%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + AG IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 7 RPLAIAPSILASDFSKLGEEVRAVDTAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTK 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VFD HLMI+ D ++ A AGCDIIT H E+ PH+ RSL+ I A+GKK GV++NP T
Sbjct: 67 KVFDAHLMIAPCDPYLEAFAKAGCDIITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTH 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +E V+D+ID++L+M+VNPGFGGQ I S + KI+Q +A++ R I +EVDGGV+ +
Sbjct: 127 PSAIEYVLDDIDLVLVMSVNPGFGGQAFIPSAVQKIKQIRAMVAGRPIDIEVDGGVSDKV 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
L AGA+ V GS+ F +Y + ++ +A+
Sbjct: 187 AGELAAAGANAFVAGSAVFKGGTLEAYKTNIAGIRNAAM 225
>gi|84625484|ref|YP_452856.1| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84369424|dbj|BAE70582.1| D-ribulose-5-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 233
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G+ V ++LR +
Sbjct: 11 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKH 69
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 70 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 129
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 130 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 189
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 190 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVEAV 232
>gi|39936876|ref|NP_949152.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris CGA009]
gi|39650733|emb|CAE29256.1| ribulose-5-phosphate-3-epimerase [Rhodopseudomonas palustris
CGA009]
Length = 232
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 105/219 (47%), Positives = 149/219 (68%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + AG IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 7 RPLAIAPSILASDFSKLGEEVRAVDTAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTK 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VFD HLMI+ D ++ A AGCDIIT H E+ PH+ RSL+ I A+GKK GV++NP T
Sbjct: 67 KVFDAHLMIAPCDPYLEAFAKAGCDIITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTH 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +E V+D+ID++L+M+VNPGFGGQ I S + KI+Q +A++ R I +EVDGGV+ +
Sbjct: 127 PSAIEYVLDDIDLVLVMSVNPGFGGQAFIPSAVQKIKQIRAMVAGRPIDIEVDGGVSDKV 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
L AGA+ V GS+ F +Y + ++ +A+
Sbjct: 187 AGELAAAGANAFVAGSAVFKGGTLEAYKANIAGIRNAAM 225
>gi|312279111|gb|ADQ63768.1| Pentose-5-phosphate-3-epimerase, putative [Streptococcus
thermophilus ND03]
Length = 219
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 133/214 (62%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSILAAD++ E++ I +GA+ +H D+MDG FVPNIS+GADV+ S+R +S
Sbjct: 2 SYKIAPSILAADYANFASELARIDASGAEYVHIDIMDGQFVPNISWGADVVASMRKHSKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+ + ++ A AG DI+T H E++ HI +++ I A G K GV INP TPV
Sbjct: 62 VFDCHLMVVDPERYVTAYAQAGADIMTIHVEATKHIHGAIQKIKAAGMKAGVVINPGTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
L V+ +D +LIMTVNPGFGG I + K+ Q L K S +EVDGGV ++
Sbjct: 122 EALIPVLALVDQVLIMTVNPGFGGHTFIPEMMSKVEQVVELRQKGGYSFDIEVDGGVDNK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA++ V GS F + + L D
Sbjct: 182 TIAACAKAGANVFVAGSYLFKNHDLTAQVQTLRD 215
>gi|118468662|ref|YP_887382.1| ribulose-phosphate 3-epimerase [Mycobacterium smegmatis str. MC2
155]
gi|118169949|gb|ABK70845.1| ribulose-phosphate 3-epimerase [Mycobacterium smegmatis str. MC2
155]
Length = 225
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 129/218 (59%), Gaps = 6/218 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E++ + A +H DVMD FVPN++ G V+ SL +D+ D
Sbjct: 6 IAPSILAADFARLADEVAAV--GDADWLHVDVMDNHFVPNLTLGLPVVESLLKVTDTPMD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + + A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 64 CHLMIENPERWAPGYAEAGAYNVTFHAEATDNPIAVARDIRAAGAKAGLSVKPGTPLEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+++ E D +L+M+V PGFGGQ+ I + K+ A+ L+ + ++ +E+DGG+ + I+
Sbjct: 124 LEILREFDTLLVMSVEPGFGGQKFIPEVLAKVATARRLVDSGELTVVVEIDGGINADTIE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+AG D V GS+ ++ + + + L +++A A
Sbjct: 184 QAAEAGVDCFVAGSAVYSAEDPAAAVEALR--RQAAGA 219
>gi|156936455|ref|YP_001440371.1| ribulose-phosphate 3-epimerase [Cronobacter sakazakii ATCC BAA-894]
gi|156534709|gb|ABU79535.1| hypothetical protein ESA_04356 [Cronobacter sakazakii ATCC BAA-894]
Length = 229
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 104/223 (46%), Positives = 146/223 (65%), Gaps = 9/223 (4%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M ++ I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V+++L
Sbjct: 1 MEKRMKQYLIAPSILSADFARLGEDTARVLAAGADVVHFDVMDNHYVPNLTIGPMVLKAL 60
Query: 58 RSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
R Y + D HLM+ +D I ADAG IITFHPE+S HI RSL+ I G K G+
Sbjct: 61 RDYGITAPIDVHLMVKPVDRLIPDFADAGASIITFHPEASEHIDRSLQLIKEHGCKAGLV 120
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEV 174
NP TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+++ + I R I LEV
Sbjct: 121 FNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLEKLKEVRQRIDASGRDIRLEV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
DGGV NI ++ AGAD+ V GS+ FN+ Y K +ND++
Sbjct: 181 DGGVKVSNIGAIAAAGADMFVAGSAIFNEPD---YQKVINDMR 220
>gi|126334824|ref|XP_001368566.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase [Monodelphis
domestica]
Length = 228
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + + + A +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLACLGAECTWMLDSRADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ + S L +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
>gi|302024548|ref|ZP_07249759.1| ribulose-phosphate 3-epimerase [Streptococcus suis 05HAS68]
gi|330833623|ref|YP_004402448.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis ST3]
gi|329307846|gb|AEB82262.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis ST3]
Length = 219
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 133/208 (63%), Gaps = 2/208 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ +E+ + K G + +H DVMDG FVPNISFGADV+ ++R +S VF
Sbjct: 5 KIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVPNISFGADVVAAMRPHSKLVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ ++HI A AG DI+T H E++ H+ +L+ I A G K GV INP TP+
Sbjct: 65 DCHLMVSNPENHIETFARAGADILTIHAEATVHLHGTLQKIRAAGMKVGVVINPGTPLVT 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E V++ +D +L+MTVNPGFGGQ I KI L + + +EVDGG+ + I
Sbjct: 125 IEPVLNLVDQVLLMTVNPGFGGQAYIPEVAEKIADLVKLREAKGLNFDIEVDGGIDDKTI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAK 211
S AGA++ V GS F + + AK
Sbjct: 185 HSAKNAGANVFVAGSYLFKGDLDANVAK 212
>gi|41407233|ref|NP_960069.1| ribulose-phosphate 3-epimerase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395584|gb|AAS03452.1| Rpe [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 232
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 126/219 (57%), Gaps = 7/219 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADFSRL +E + +T GA +H DVMD FVPN++ G V++SL + + D
Sbjct: 13 IAPSILSADFSRLADEAAAVT--GADWLHVDVMDNHFVPNLTIGLPVVQSLLATTTIPMD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 71 CHLMIENPDRWAPPYAEAGAHNVTFHAEATDNPIGVARDIRAAGAKAGISVKPGTPLEPY 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+++ + D +LIM+V PGFGGQ I + K+R A+ LI + +I +E+DGG+ + I+
Sbjct: 131 LEILPQFDTLLIMSVEPGFGGQSFIPEVLGKVRTARKLIDAGELTILVEIDGGINADTIE 190
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+AG D V G + + + + L++ AL
Sbjct: 191 QAAEAGVDCFVAGLAVYGADDPAAAVEA---LRRQALGA 226
>gi|327468440|gb|EGF13925.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK330]
Length = 219
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 133/206 (64%), Gaps = 3/206 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +
Sbjct: 1 MT-SFKIAPSILSADYANFEAELRKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP
Sbjct: 60 SKLVFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGV 178
TPV +++V++ +D +L+MTVNPGFGGQ + T+ KIR+ + + + +EVDGG+
Sbjct: 120 TPVEAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I +AGA++ V GS F
Sbjct: 180 DDKTIGIAKEAGANVFVAGSYVFKGD 205
>gi|122879317|ref|YP_202691.6| ribulose-phosphate 3-epimerase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 223
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 149/226 (65%), Gaps = 7/226 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+ADF+RLGEE++N+ KAGA +HFDVMD +VPN++ G+ V ++LR +
Sbjct: 1 MQPTA-IAPSILSADFARLGEEVNNVLKAGADWVHFDVMDNHYVPNLTIGSMVCQALRKH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D + ADAG I+FHPE+S H+ R+++ I + G + G+ +NP
Sbjct: 60 GITAPIDVHLMVEPVDRIVPDFADAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TPV IL+ V+ E+D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGG
Sbjct: 120 ATPVDILDWVLPELDLVLVMSVNPGFGGQAFIPSALDKLRAIRTKIDALGKPIRLEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V + NI ++ AGAD V GS+ FN YA+ + ++ + A+
Sbjct: 180 VKADNIGAIAAAGADTFVAGSAIFNAPD---YAQVIAQMRAAVEAV 222
>gi|271964335|ref|YP_003338531.1| ribulose-phosphate 3-epimerase [Streptosporangium roseum DSM 43021]
gi|270507510|gb|ACZ85788.1| Ribulose-phosphate 3-epimerase [Streptosporangium roseum DSM 43021]
Length = 218
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 134/219 (61%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL E + + A +H DVMD FVPN++ G V+ SL + +
Sbjct: 2 AVQISPSILSADFARLAEAAAAVPN--ADWLHVDVMDNHFVPNLTLGLPVVESLLRATST 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H E+S R+LR I A G ++G A+NP TPV
Sbjct: 60 PLDCHLMIEDPDRWAPAYAEAGAGSVTIHAEASKAPVRTLRQIRAAGARSGFALNPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
ED++ EIDM+L+MTV PGFGGQ+ ++ +PKIR+A+ALI K + L+VDGGV+ +
Sbjct: 120 EPYEDLLGEIDMLLLMTVEPGFGGQKFLDVVLPKIRRARALIDKHGGQVWLQVDGGVSDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V G++ + + L + A
Sbjct: 180 TIERCAEAGADVFVAGNAVYGAEDPARAVDALRARAEKA 218
>gi|148380456|ref|YP_001254997.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. ATCC
3502]
gi|153931671|ref|YP_001384679.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. ATCC
19397]
gi|153936705|ref|YP_001388200.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. Hall]
gi|148289940|emb|CAL84053.1| putative ribulose-phosphate 3-epimerase [Clostridium botulinum A
str. ATCC 3502]
gi|152927715|gb|ABS33215.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. ATCC
19397]
gi|152932619|gb|ABS38118.1| ribulose-phosphate 3-epimerase [Clostridium botulinum A str. Hall]
gi|322806769|emb|CBZ04338.1| ribulose-phosphate 3-epimerase [Clostridium botulinum H04402 065]
Length = 216
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 104/213 (48%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E HI R++ I ++G K VA+NP T V+
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEGDKHIDRTINYIKSLGIKAAVALNPGTSVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ K L K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKVLSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + GADLLV GS+ F K L +
Sbjct: 182 IKEIADCGADLLVAGSAVFKNGEIEKNIKVLRE 214
>gi|42524169|ref|NP_969549.1| ribulose-phosphate 3-epimerase [Bdellovibrio bacteriovorus HD100]
gi|39576377|emb|CAE80542.1| probable ribulose-phosphate 3-epimerase [Bdellovibrio bacteriovorus
HD100]
Length = 210
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 8/216 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF+ L +EI + +AGA IH DVMDG FVPNI+ G V+++L+ S
Sbjct: 1 MVAPSILSADFANLEKEIKAVAQAGADWIHVDVMDGRFVPNITIGIPVVKALKKVSPLPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ AG D +T H ES+ +L+ I +G K G+ + P T V
Sbjct: 61 DVHLMIEEPERYVEEFVKAGSDYLTIHVESTKDAAGTLKRIRELGAKPGITLRPRTAVEE 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ ++ D++L+MTV PGFGGQ + + KI + + I ++S +EVDGG+ +
Sbjct: 121 VLPLLPLCDLVLVMTVEPGFGGQSFMNDQVAKITRLRQEISSENLSCLIEVDGGINAETA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
K +A D+ V GS F ++ Y + LK S
Sbjct: 181 KICHEA--DVFVAGSYVFGKE----YGSAIASLKGS 210
>gi|226323822|ref|ZP_03799340.1| hypothetical protein COPCOM_01597 [Coprococcus comes ATCC 27758]
gi|225208006|gb|EEG90360.1| hypothetical protein COPCOM_01597 [Coprococcus comes ATCC 27758]
Length = 220
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 139/217 (64%), Gaps = 2/217 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PSIL+ADF L E I + GA +HFDVMDG FVP+ISFG V+ S++
Sbjct: 2 EYKLSPSILSADFCNLEEGIRQTEENGAVYLHFDVMDGVFVPSISFGMPVLASIKPAVKQ 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLMI+ ++ A+AG DI+T H ES IR +L I A G KTG+AI+P+TPV
Sbjct: 62 VIDTHLMITEPIRYVEAFAEAGADILTVHYESCKDIRATLDKIKACGMKTGLAISPDTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+L++ + E+DM L+MTV+PGFGGQ+LI + K+R +A++ +R + ++VDGG+ +
Sbjct: 122 EVLKEFLGEVDMFLVMTVHPGFGGQKLIPEMLDKVRTLRAMLNERGLETDIQVDGGIYAF 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N+K + AGA+++V GS+ F + + + LK
Sbjct: 182 NVKEALDAGANVIVAGSAVFKGNAGENTRELMEILKN 218
>gi|229493493|ref|ZP_04387278.1| ribulose-phosphate 3-epimerase [Rhodococcus erythropolis SK121]
gi|229319454|gb|EEN85290.1| ribulose-phosphate 3-epimerase [Rhodococcus erythropolis SK121]
Length = 223
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+RL +E + + +G+ +H DVMD FVPN++ G V+ SL +D
Sbjct: 1 MIAPSILSADFARLADEATAV--SGSDWLHVDVMDAHFVPNLTLGLPVVESLLKATDIPL 58
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI + + A+AG +TFH E++ R R I A G K G++I P TP+
Sbjct: 59 DCHLMIENPERWAPPYAEAGAYNVTFHAEATDDPRSVARDIRAAGAKAGLSIKPGTPIDD 118
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+++ + D +LIM+V PGFGGQ + + K R + L+ + ++ +E+DGG+ + I
Sbjct: 119 YLEILKDFDTLLIMSVEPGFGGQSFMPQVLDKARAVRKLVDSGELTLLVEIDGGINASTI 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG D V GS+ + ++L SA
Sbjct: 179 EQAAEAGIDCFVAGSAVYGASDPGEAVRKLRAQAASA 215
>gi|227488842|ref|ZP_03919158.1| ribulose-phosphate 3-epimerase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227091264|gb|EEI26576.1| ribulose-phosphate 3-epimerase [Corynebacterium glucuronolyticum
ATCC 51867]
Length = 282
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSILAA+++ LGE+I+ + AG IH D+MDG FVPN+SFGADV +++ +D +
Sbjct: 69 IIAPSILAANYAALGEDIAKVDNAG--WIHVDIMDGHFVPNLSFGADVTKAVNEVTDQIL 126
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ +AG D + FH E++ R L + G + G ++ P TP+
Sbjct: 127 DVHLMIEEPEKWVDNYIEAGADCVIFHVEATDDPRPLLVALREKGVRAGFSVKPGTPIED 186
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
D++D D++L+M+V PGFGGQ+ + + K+R + I K+ + +E+DGGV I
Sbjct: 187 YLDLVDIADLVLVMSVEPGFGGQKFMPDMLDKVRTLREYIDKKGLRTLIEIDGGVGEGTI 246
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+AG D V GS+ F + + +L +L
Sbjct: 247 TKAAEAGCDAFVAGSAVFGKDDPHAAVDKLKELA 280
>gi|163790818|ref|ZP_02185243.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. AT7]
gi|159873886|gb|EDP67965.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. AT7]
Length = 216
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FGAD + ++R +
Sbjct: 1 MKLAPSILSADFANLARDIRLVEDGGADYIHVDVMDGHFVPNITFGADTVAAIRPVTKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+ ++H+ A AG DIIT H ES+PHI R L+ I G K G+A+NP TP+
Sbjct: 61 LDCHLMVEYPENHVKNFAKAGADIITIHAESTPHIHRVLQLIKDQGVKAGIAVNPGTPIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L V+ +D++L+MTVNPG+GGQ I T+ KI+ AK L + +EVDGG+ +
Sbjct: 121 SLIHVLGLVDLVLVMTVNPGYGGQSFILETLKKIQAAKELKDREGYTYEIEVDGGIAEQT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K +AGA + V GS +N + + L D K
Sbjct: 181 AKQCKEAGASVFVAGSYIYNAEDPTNQMAILRDAVK 216
>gi|227542163|ref|ZP_03972212.1| ribulose-phosphate 3-epimerase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227181992|gb|EEI62964.1| ribulose-phosphate 3-epimerase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 288
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSILAA+++ LGE+I+ + AG IH D+MDG FVPN+SFGADV +++ +D +
Sbjct: 75 IIAPSILAANYAALGEDIAKVDNAG--WIHVDIMDGHFVPNLSFGADVTKAVNEVTDQIL 132
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ +AG D + FH E++ R L + G + G ++ P TP+
Sbjct: 133 DVHLMIEEPEKWVDNYIEAGADCVIFHVEATDDPRPLLVALREKGVRAGFSVKPGTPIED 192
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
D++D D++L+M+V PGFGGQ+ + + K+R + I K+ + +E+DGGV I
Sbjct: 193 YLDLVDIADLVLVMSVEPGFGGQKFMPDMLDKVRTLREYIDKKGLRTLIEIDGGVGEGTI 252
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+AG D V GS+ F + + +L +L
Sbjct: 253 TKAAEAGCDAFVAGSAVFGKDDPHAAVDKLKELA 286
>gi|154505946|ref|ZP_02042684.1| hypothetical protein RUMGNA_03488 [Ruminococcus gnavus ATCC 29149]
gi|153793964|gb|EDN76384.1| hypothetical protein RUMGNA_03488 [Ruminococcus gnavus ATCC 29149]
Length = 220
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF RLGE++ AGA+ IHFDVMDG FVP+ISFG V+ S++ ++ V
Sbjct: 4 RIAPSILSADFKRLGEQLKETEAAGAEYIHFDVMDGMFVPSISFGMPVLASIKGHTQQVM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ ++ A AG DI+T H E+ ++ ++ IHA G K GV+I P TPV+
Sbjct: 64 DVHLMVTEPIRYVEDFAKAGADILTVHVEACENLVETVDKIHACGMKAGVSIKPNTPVSA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
LE V+D+ +M LIM+V PGFGGQ I ++ KI++ + L+ R I +EVDGG+ N+
Sbjct: 124 LEPVLDKTEMFLIMSVEPGFGGQAFIPESLDKIKELRNLLNARGIQADIEVDGGIYHSNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K ++ AGA+++V GS+ F + + L
Sbjct: 184 KEVLNAGANVIVAGSAVFKGNVAENVKGFMEIL 216
>gi|312898695|ref|ZP_07758085.1| ribulose-phosphate 3-epimerase [Megasphaera micronuciformis F0359]
gi|310620614|gb|EFQ04184.1| ribulose-phosphate 3-epimerase [Megasphaera micronuciformis F0359]
Length = 219
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 131/213 (61%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PS+L+ADFS L E+ +I ++GA +H D+MDG FVPN++FG +I +LR +++
Sbjct: 2 IQIGPSLLSADFSNLKAEVQDIERSGADFLHLDMMDGHFVPNLTFGVPLIAALRKHTNLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM + +I+ +A AG +T H E+ PH+ R L I G K GVA+NP TPV+
Sbjct: 62 FDAHLMTECPEVYIDELAHAGVQYMTVHEEACPHLDRVLHKIKESGMKCGVALNPSTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI---RQAKALIGKRSISLEVDGGVTSR 181
LE + +D+ILIM+VNPGFGGQ+ I + KI + A +G +EVDGG+T+
Sbjct: 122 SLECIASLVDLILIMSVNPGFGGQKFIPYAVDKIGDVTELLATVGNDKAVIEVDGGITAD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + AGA +V GS+ F Q + L
Sbjct: 182 TIGPVTAAGATWIVAGSAVFGQPDRAEAIRALR 214
>gi|87119762|ref|ZP_01075659.1| ribulose-phosphate 3-epimerase [Marinomonas sp. MED121]
gi|86165238|gb|EAQ66506.1| ribulose-phosphate 3-epimerase [Marinomonas sp. MED121]
Length = 224
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 136/212 (64%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSILAADF+RLGEE+ ++ AGA IHFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILAADFARLGEEVDSVLNAGADIIHFDVMDNHYVPNLTIGPMVCKALRDYGVTAEI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I AG ITFHPE++ HI RSL+ I G K G+ NP TP+
Sbjct: 66 DVHLMVKPVDGMIEEFLKAGASYITFHPEATEHIDRSLQMIKDAGCKAGLVFNPATPLHH 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
++ V+D++DMI++M+VNPGFGGQ+ I +T+ K+R+A+ALI ++ EVDGGV+ +NI
Sbjct: 126 MKHVMDKLDMIMLMSVNPGFGGQKFIPATLDKLREARALIDSSGYNIRLEVDGGVSEKNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGAD V GS+ F + +
Sbjct: 186 AEIAVAGADTFVAGSAIFGKPDYKVAIDSMRS 217
>gi|160947225|ref|ZP_02094392.1| hypothetical protein PEPMIC_01158 [Parvimonas micra ATCC 33270]
gi|158446359|gb|EDP23354.1| hypothetical protein PEPMIC_01158 [Parvimonas micra ATCC 33270]
Length = 219
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 147/218 (67%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF+ L E+ + K G K +H DVMDG FVPNISFG +I+ LR ++ +
Sbjct: 2 LELSPSLLSADFTNLKSEMEVLGKNGVKYLHLDVMDGMFVPNISFGPMIIKQLRPLTNMI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D ++ DAG DI+T H E+ H+ R++ I ++G K GV++NP T +
Sbjct: 62 FDVHLMIEDPDRYVQNFKDAGADILTVHYEACKHLHRTVSYIKSLGMKAGVSLNPATNID 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+ V++++D++LIM+VNPGFGGQ I S I KI+ KA I +R+++ +EVDGGV + N
Sbjct: 122 VLDYVLEDLDLVLIMSVNPGFGGQSFIPSAIDKIKNLKAKIRERNLNVIVEVDGGVKTTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGE--ISYAKRLNDLKK 218
+K +++AGADL+V GS F K +Y + + KK
Sbjct: 182 VKDVIEAGADLIVSGSDVFADKENRIRAYKEIFKNYKK 219
>gi|225850190|ref|YP_002730424.1| ribulose-phosphate 3-epimerase [Persephonella marina EX-H1]
gi|225644872|gb|ACO03058.1| ribulose-phosphate 3-epimerase [Persephonella marina EX-H1]
Length = 225
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 102/227 (44%), Positives = 141/227 (62%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADFS+LGEEI + K GA IH DVMDG +VPNI+ G VI SLRS
Sbjct: 1 MAETKLIAPSILSADFSKLGEEIRKVEKGGADIIHLDVMDGRYVPNITIGPPVIESLRSI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D FD HLMI + ++ AGCD+I+FH ++ H R + I + K GV +NP
Sbjct: 61 TDLPFDAHLMIVEPERYVPDFIKAGCDMISFHMDACIHSHRLVDYIKSQNVKAGVVLNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGG 177
TPV LE++I ID +LIM+VNPGFGGQ+ I T+ K+++ K L+ + I +E+DGG
Sbjct: 121 TPVNTLEEIIYYIDYVLIMSVNPGFGGQKFIPETLNKVKKLKKLMEETGRTDILIEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+ NI + AG ++ V GSS F + A+ + LK+ AL I+
Sbjct: 181 ININNIGDVSSAGVNIFVAGSSIFKAEDP---AEMVRKLKEKALYIE 224
>gi|189463826|ref|ZP_03012611.1| hypothetical protein BACINT_00159 [Bacteroides intestinalis DSM
17393]
gi|189438776|gb|EDV07761.1| hypothetical protein BACINT_00159 [Bacteroides intestinalis DSM
17393]
Length = 216
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 128/218 (58%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ L +++ + ++ A +H DVMDG FVPNISFG V++ +
Sbjct: 1 MKP--IIAPSILSADFAYLAKDLEMLNRSEADWVHIDVMDGVFVPNISFGFPVLKYVAKI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + I+ + G + H E+ PH+ R ++ I G + V +NP
Sbjct: 59 SKKPLDVHLMIVQPEKFIHEVKALGAHTMNVHFEACPHLHRVVQQIREAGMQPAVTLNPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L+D+I ++ M+L+M+VNPGFGGQQ IE TI K+R+ +ALI +EVDGGV
Sbjct: 119 TPVAMLKDIIQDVYMVLLMSVNPGFGGQQFIEHTIEKVRELRALIDSTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD LV G++ F L +L
Sbjct: 179 NLETGARLVAAGADALVAGNAVFAAPDPEGMIHSLKEL 216
>gi|146319647|ref|YP_001199359.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis 05ZYH33]
gi|146321845|ref|YP_001201556.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis 98HAH33]
gi|253752645|ref|YP_003025786.1| ribulose-phosphate 3-epimerase [Streptococcus suis SC84]
gi|253754471|ref|YP_003027612.1| ribulose-phosphate 3-epimerase [Streptococcus suis P1/7]
gi|253756404|ref|YP_003029544.1| ribulose-phosphate 3-epimerase [Streptococcus suis BM407]
gi|145690453|gb|ABP90959.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis 05ZYH33]
gi|145692651|gb|ABP93156.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis 98HAH33]
gi|251816934|emb|CAZ52583.1| putative ribulose-phosphate 3-epimerase [Streptococcus suis SC84]
gi|251818868|emb|CAZ56711.1| putative ribulose-phosphate 3-epimerase [Streptococcus suis BM407]
gi|251820717|emb|CAR47479.1| putative ribulose-phosphate 3-epimerase [Streptococcus suis P1/7]
gi|292559264|gb|ADE32265.1| Ribulose-phosphate 3-epimerase [Streptococcus suis GZ1]
gi|319759061|gb|ADV71003.1| Pentose-5-phosphate-3-epimerase [Streptococcus suis JS14]
Length = 219
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 95/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSILAAD++ +E+ + K G + +H DVMDG FVPNISFGADV+ ++R +S V
Sbjct: 4 FKIAPSILAADYANFEKELKRLEKTGVEYVHIDVMDGHFVPNISFGADVVAAMRPHSKLV 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FDCHLM+S+ ++HI A AG DI+T H E++ H+ +L+ I A G K GV INP TP+
Sbjct: 64 FDCHLMVSNPENHIETFARAGADILTIHAEATVHLHGTLQKIRAAGMKVGVVINPGTPLV 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V++ +D +L+MTVNPGFGGQ I KI L + + +EVDGG+ +
Sbjct: 124 TIEPVLNLVDQVLLMTVNPGFGGQAYIPEVADKIADLVKLREAKGLAFDIEVDGGIDDKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I S AGA++ V GS F + + AK
Sbjct: 184 IHSAKSAGANVFVAGSYLFKGDLDANVAK 212
>gi|168180615|ref|ZP_02615279.1| ribulose-phosphate 3-epimerase [Clostridium botulinum NCTC 2916]
gi|182668542|gb|EDT80521.1| ribulose-phosphate 3-epimerase [Clostridium botulinum NCTC 2916]
Length = 216
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 103/213 (48%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADFS+LGE+I N+ K GA IH DVMDG FVPNISFG +I+S+R+ +D
Sbjct: 2 VKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I AG DII+ H E+ HI R++ I ++G K VA+NP T ++
Sbjct: 62 FDVHLMIEEPSKYIEDFVKAGADIISVHYEADKHIDRTINYIKSLGIKVAVALNPGTSIS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++D+I +DM+LIM+VNPGFGGQ+ I+ KI++ K L K + + +EVDGGVT N
Sbjct: 122 CIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKVLSEKYNKDLIIEVDGGVTKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IK + GADLLV GS+ F K L +
Sbjct: 182 IKEIADCGADLLVAGSAVFKNGEIEKNIKVLRE 214
>gi|163848736|ref|YP_001636780.1| ribulose-phosphate 3-epimerase [Chloroflexus aurantiacus J-10-fl]
gi|222526682|ref|YP_002571153.1| Ribulose-phosphate 3-epimerase [Chloroflexus sp. Y-400-fl]
gi|163670025|gb|ABY36391.1| Ribulose-phosphate 3-epimerase [Chloroflexus aurantiacus J-10-fl]
gi|222450561|gb|ACM54827.1| Ribulose-phosphate 3-epimerase [Chloroflexus sp. Y-400-fl]
Length = 223
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-- 62
+++ PSIL ADF+RLGE+++ AG IH DVMDG FVPNISFG V+R+LR +D
Sbjct: 1 MRLAPSILTADFARLGEQVATACAAGIDWIHLDVMDGRFVPNISFGPLVVRALRPLADQY 60
Query: 63 -SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ D HLMI + ++ A AG D+IT H E++PH+ R+++ IH +GKK GVAINP T
Sbjct: 61 GALLDAHLMIVEPERYLADFAAAGADLITVHAEATPHVHRAVQMIHNLGKKAGVAINPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P++++E++ID++++IL+MTVNPGFGGQ LI S + K+++ + L+G R + + VDGGV
Sbjct: 121 PLSMVEELIDQVELILLMTVNPGFGGQTLIPSVLAKVQRLRTLLGDRPVEIMVDGGVNPT 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + AGA + VVGS+ F + L
Sbjct: 181 TIAACATAGATVAVVGSAVFGPQPIPDAISELR 213
>gi|315125419|ref|YP_004067422.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas sp. SM9913]
gi|315013932|gb|ADT67270.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas sp. SM9913]
Length = 227
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 146/225 (64%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 5 KQKYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYG 64
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS I A+AG IITFHPE+S HI R+L+ I G + G+ NP
Sbjct: 65 IKAPIDVHLMVKPVDSLIPQFAEAGASIITFHPEASEHIDRTLQLIKDEGCQAGLVFNPA 124
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+AK I + R I LEVDGG+
Sbjct: 125 TSLSYLDHVMDKVDVILLMSVNPGFGGQSFIPQTLEKLREAKQRIVESGRDIRLEVDGGI 184
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + +AGAD+ V GS+ FNQ Y ++++++ ++
Sbjct: 185 KVDNIAAAAEAGADMFVAGSAIFNQ---ADYKTVIDEMRQQLESV 226
>gi|15617131|ref|NP_240344.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681883|ref|YP_002468269.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471588|ref|ZP_05635587.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11387063|sp|P57603|RPE_BUCAI RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|25292406|pir||F84992 ribulose-phosphate 3-epimerase (EC 5.1.3.1) [imported] - Buchnera
sp. (strain APS)
gi|10039196|dbj|BAB13230.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219624726|gb|ACL30881.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311087423|gb|ADP67503.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087916|gb|ADP67995.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 228
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+I + AG+ IHFDVMD +VPN+S G ++ SLR+Y+ +
Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE++ HI R+L I G K G+A NP TP+
Sbjct: 66 DVHLMVKPVDNLIPQFAKAGATFITFHPEATLHIERTLNLIKENGCKAGLAFNPATPLNF 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ +++++D+IL+M+VNPGFG Q + ST K+R+ + +I I LEVDGGV NI
Sbjct: 126 LDYILEKLDLILLMSVNPGFGNQSFLPSTFNKLREVRKIIDANFSDILLEVDGGVKLDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGA++ V+GS F +++
Sbjct: 186 ADIACAGANVFVMGSGLFKYSNYKLVIEKIRK 217
>gi|300854450|ref|YP_003779434.1| ribulose-phosphate 3-epimerase [Clostridium ljungdahlii DSM 13528]
gi|300434565|gb|ADK14332.1| ribulose-phosphate 3-epimerase [Clostridium ljungdahlii DSM 13528]
Length = 216
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGE+I ++ K GA IH DVMDG FVPNISFG +I+S+R +
Sbjct: 2 IRIAPSILSADFSKLGEDIKSLDKYGADLIHIDVMDGNFVPNISFGVPIIKSIRPLTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ AG DIIT H E+ HI R++ I + G K VA+NP T V
Sbjct: 62 FDVHLMIEEPSRYVEDFVKAGADIITVHFEADRHIDRTINYIKSFGVKAAVALNPATLVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I +DM+LIM+VNPGFGGQ+ IE K++ K L K +++ +EVDGGV+ N
Sbjct: 122 NIKYLIPYLDMVLIMSVNPGFGGQKYIEYCSDKLKYIKELSSKCNKNLMIEVDGGVSKGN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +V +GA+++V GS+ F + L
Sbjct: 182 IAKIVDSGANVIVAGSAVFKGGNIEENIRLLR 213
>gi|253566321|ref|ZP_04843775.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_2_5]
gi|265767014|ref|ZP_06094843.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_16]
gi|251945425|gb|EES85863.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 3_2_5]
gi|263253391|gb|EEZ24867.1| ribulose-phosphate 3-epimerase [Bacteroides sp. 2_1_16]
Length = 216
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ L ++I I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFAYLAKDIEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP
Sbjct: 59 TSKPLDVHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ +L+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+++ + LI + +EVDGGV
Sbjct: 119 TPITLLQDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVKELRELIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD LV G++ F + + L
Sbjct: 179 NLETGARLIAAGADALVAGNAIFAAENPEGMIHAMKGL 216
>gi|225574504|ref|ZP_03783114.1| hypothetical protein RUMHYD_02581 [Blautia hydrogenotrophica DSM
10507]
gi|225038291|gb|EEG48537.1| hypothetical protein RUMHYD_02581 [Blautia hydrogenotrophica DSM
10507]
Length = 233
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 90/225 (40%), Positives = 141/225 (62%), Gaps = 2/225 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ Q+ PSIL+ADF+RLGE+I + +AG K +H DVMDG FVP+ISFG VI+S+R S
Sbjct: 8 SREYQLCPSILSADFNRLGEQIQMLERAGVKWLHIDVMDGDFVPSISFGMPVIKSIRKES 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLM++ +I + G D IT H E+ + R+++ I G + GV+I P T
Sbjct: 68 SMFFDVHLMVTEPGRYIQDFVECGADSITVHTEACEDLERTIQMIRDSGVRVGVSIKPAT 127
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR--QAKALIGKRSISLEVDGGVT 179
PV + ++++DM+LIMTVNPGFGGQ+ +E T KI+ + + S+ ++VDGG+
Sbjct: 128 PVHDISHFLEDVDMVLIMTVNPGFGGQKYMEETTEKIQELRELIEEEELSVDIQVDGGIN 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+ ++++AGA+L+V GS FN + + + +K+ A + +
Sbjct: 188 RETLPTVLRAGANLVVAGSYVFNGDILQNVKEATSTIKRYADSCE 232
>gi|37524112|ref|NP_927456.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36783535|emb|CAE12381.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 226
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 134/217 (61%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+A+F+RLGE+ + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MKDFLIAPSILSANFARLGEDTDKVLAAGADVVHFDVMDNHYVPNLTIGPMVCQALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG ITFHPE+S HI RSL+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRIIPDFAKAGATYITFHPETSEHIDRSLQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+RQ + +I + + EVDGG+
Sbjct: 121 TPLSHLDYVLDKLDIILLMSVNPGFGGQSFIPGTLEKLRQVRKIIDESGYDIRLEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ NI + AGAD+ V GS+ F+Q + +
Sbjct: 181 KASNIAAAATAGADMFVAGSAIFSQPDYKTVIDNMRS 217
>gi|261401216|ref|ZP_05987341.1| ribulose-phosphate 3-epimerase [Neisseria lactamica ATCC 23970]
gi|269208797|gb|EEZ75252.1| ribulose-phosphate 3-epimerase [Neisseria lactamica ATCC 23970]
Length = 227
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 106/227 (46%), Positives = 151/227 (66%), Gaps = 8/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE++N+ AGA IHFDVMD +VPN++FG V +L+ Y
Sbjct: 1 MT-AYRIAPSILSADFARLGEEVANVISAGADLIHFDVMDNHYVPNLTFGPMVCAALKPY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG IITFHPE+S HI RSL I MG + G+ +NP
Sbjct: 60 ASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSLSLIRDMGCQAGLVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TPV +LE+V+D +DM+L+M+VNPGFGGQ I T+ KIR+ +A++ R I++EV
Sbjct: 120 TPVYLLENVLDRLDMVLLMSVNPGFGGQGFILHTLEKIRRVRAMLDAYEAQSGRHIAIEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSA 220
DGG+ + NI ++ AGAD V GS+ F + + + +L+++A
Sbjct: 180 DGGIKTDNIAAVAAAGADTFVAGSAIFGKPDYKAVIDAMRVELEQAA 226
>gi|114583053|ref|XP_001145848.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 7 [Pan
troglodytes]
Length = 234
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 121/223 (54%), Gaps = 10/223 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDG------CFVPNISFGADVI 54
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGFCLSCRHFVPNITFGHPVV 60
Query: 55 RSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
SLR D FD H+M+S + + +A AG + TFH E++ + ++ I G K
Sbjct: 61 ESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMK 120
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +
Sbjct: 121 VGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDI 178
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
EVDGGV + +AGA+++V GS+ + S L +
Sbjct: 179 EVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 221
>gi|327398445|ref|YP_004339314.1| ribulose-phosphate 3-epimerase [Hippea maritima DSM 10411]
gi|327181074|gb|AEA33255.1| ribulose-phosphate 3-epimerase [Hippea maritima DSM 10411]
Length = 219
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 123/218 (56%), Gaps = 2/218 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ DF+ L +EI + AG +H D+MDG FVPN++FG ++ ++
Sbjct: 1 MKNNKLIAPSLLSCDFTHLADEIMAVENAGCDMLHLDIMDGHFVPNMTFGPFIVSQIKRV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + D + +AG D + H ES H+ R + I +G K VA+NP
Sbjct: 61 SKVPLDVHLMIEAPDMWLERYVEAGADYLCVHQESVVHLNRVVNRITELGAKPAVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP +LE V++ +DM+L+M+VNPGFGGQ+ I + I K+ + ++ +EVDGG+
Sbjct: 121 TPPQVLEYVLEFVDMVLVMSVNPGFGGQKYISNIIKKVEWLARFREENGLNFLIEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
NI L + G D+ V GS+ F+ + +L
Sbjct: 181 NRTNIGMLSKKGVDVFVAGSAIFSSDDYKKTIEEFREL 218
>gi|58699121|ref|ZP_00373950.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630418|ref|YP_002727209.1| ribulose-phosphate 3-epimerase [Wolbachia sp. wRi]
gi|58534362|gb|EAL58532.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592399|gb|ACN95418.1| ribulose-phosphate 3-epimerase [Wolbachia sp. wRi]
Length = 226
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 98/223 (43%), Positives = 140/223 (62%), Gaps = 10/223 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF++LGEE+ I+ G IH DVMDG FVPNI+ G V+ ++R YS+
Sbjct: 2 SIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM--------GKKTGV 115
FD HLM++S +HI +AG DIIT H E+ H+ R +R I + + GV
Sbjct: 62 PFDVHLMVTSPGNHIESFINAGADIITVHAEAEIHLERLIRKIKSYKNVNDEKKPIQVGV 121
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LE 173
+I P T ++LE +I E+D++LIMTVNPGFGGQ+ I S + KI K +I +R++ +
Sbjct: 122 SIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQLNKISTIKKMIQERNLKTQIS 181
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
VDGG+ N +++AGAD+LV GS+ F + L +L
Sbjct: 182 VDGGINFSNAADIIKAGADILVAGSAIFKAEDIKKAVNDLKNL 224
>gi|326382171|ref|ZP_08203863.1| ribulose-phosphate 3-epimerase [Gordonia neofelifaecis NRRL
B-59395]
gi|326198901|gb|EGD56083.1| ribulose-phosphate 3-epimerase [Gordonia neofelifaecis NRRL
B-59395]
Length = 234
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 9/224 (4%)
Query: 3 PSIQIVPSILAADFSRLGEEISNI----TKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
P+ I PSIL+ADF+ L E++ + G +H DVMD FVPN++ G V+ SL
Sbjct: 7 PAPMIAPSILSADFANLAAEVAAVGPSDVDPGVDWVHVDVMDNHFVPNLTLGMPVVESLL 66
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+D DCHLMI A+AG +TFH E++ R I A G K G+AI
Sbjct: 67 KATDIPLDCHLMIEDPGRWAPPYAEAGAYNVTFHAEATDDPTAVARDIRAAGGKAGLAIK 126
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDG 176
P TP+ +++ + D +L+M+V PGFGGQ+ + + K+R + I + L E+DG
Sbjct: 127 PGTPLEPYLEILQDFDTLLVMSVEPGFGGQKFMPEVLDKVRIIRKKIDSGDLRLLVEIDG 186
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G++ I+ +AG D V GS+ + A R+ +L++ A
Sbjct: 187 GISDSTIEEAAEAGVDCFVAGSAVYGGDDP---AARVAELRRKA 227
>gi|296273688|ref|YP_003656319.1| ribulose-phosphate 3-epimerase [Arcobacter nitrofigilis DSM 7299]
gi|296097862|gb|ADG93812.1| ribulose-phosphate 3-epimerase [Arcobacter nitrofigilis DSM 7299]
Length = 213
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L EEI+ I G IH DVMDG FVPN++ G V+ + +
Sbjct: 1 MLVAPSILSADFGKLNEEITAICDGGCDLIHVDVMDGHFVPNMTLGPVVVNPVAKIATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A + I+FH ES H R ++ I G K + +NP +
Sbjct: 61 LDVHLMVENNTFFVDLFAPLKPEYISFHIESEKHPHRLIQKIRDYGIKPAIVLNPHSTPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +++++DM+L+M+VNPGFGGQ+ I S + K ++ K LI KR+ + +EVDGGV +N
Sbjct: 121 SIEYLLEDLDMVLLMSVNPGFGGQKFITSVVEKAKKLKELINKRNPNCLIEVDGGVNDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I L AG D++V GS F+Q K L
Sbjct: 181 IHELKDAGVDVVVAGSYVFSQDDYSKAIKSLQ 212
>gi|72161481|ref|YP_289138.1| ribulose-phosphate 3-epimerase [Thermobifida fusca YX]
gi|71915213|gb|AAZ55115.1| ribulose-5-phosphate 3-epimerase [Thermobifida fusca YX]
Length = 222
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 3/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF+RL +E+ + A A +H DVMD FVPN++ G V+ SL +
Sbjct: 2 AIQISPSILSADFARLADEVEAVAGA-ADWLHVDVMDNHFVPNLTLGLPVVESLLKVAPL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E++ R+LR I A G + G+A+NP TPV
Sbjct: 61 PLDCHLMIEDPDRWAPAYAEVGAQSVTIHAEAAKAPVRTLRAIRAAGARAGLALNPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
D++ EIDM+L+MTV PGFGGQ+ ++ +PKIR+A+ LI + L+VDGGV++
Sbjct: 121 DGYADLLGEIDMLLVMTVEPGFGGQKFLDLVLPKIRRARELIRNADASVWLQVDGGVSAE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V GS+ + +K + + L L + A A
Sbjct: 181 TIERCAEAGADVFVAGSAVYGEKDPAAAVEHLRALAERATA 221
>gi|309810707|ref|ZP_07704515.1| ribulose-phosphate 3-epimerase [Dermacoccus sp. Ellin185]
gi|308435338|gb|EFP59162.1| ribulose-phosphate 3-epimerase [Dermacoccus sp. Ellin185]
Length = 227
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++I PSIL+ADF+ L E+ I A H DVMD FVPN++ G V+ SL S
Sbjct: 7 ARDVRISPSILSADFANLERELDAINN--ADWAHVDVMDNHFVPNLTLGLPVVESLLKVS 64
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI D A+AGC +TFH E++ ++ R I A G + +AI P T
Sbjct: 65 PIPLDAHLMIDDPDRWAPAYAEAGCKSVTFHVEAAADPKKLARDIRAAGARASMAIKPNT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
P D++ E+DM+L+MTV PGFGGQ + +PK+R + I + ++VDGGV+
Sbjct: 125 PWEPYADLLPELDMVLVMTVEPGFGGQSFMAEQMPKVRAVRESIRTHGGDVWVQVDGGVS 184
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ I+ +AGAD V GS+ + + + L L
Sbjct: 185 AKTIEQCAEAGADTFVAGSAVYGAESAAAAIDELRALA 222
>gi|193214519|ref|YP_001995718.1| Ribulose-phosphate 3-epimerase [Chloroherpeton thalassium ATCC
35110]
gi|193087996|gb|ACF13271.1| Ribulose-phosphate 3-epimerase [Chloroherpeton thalassium ATCC
35110]
Length = 221
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 134/215 (62%), Gaps = 2/215 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ ++ I PSIL+ADF+ L I KAGA IH DVMDG FVPNI+FG ++ ++ +
Sbjct: 4 SSNVIIAPSILSADFTNLRGAIELAEKAGADWIHCDVMDGMFVPNITFGPFIVEAVSRCT 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ + D HLMI+ D +I AG +T H E H+ R++ I + G K GV++NP T
Sbjct: 64 ELIIDTHLMIADPDRYIKEFVAAGSHQVTVHQEECKHLHRTVDFIKSCGAKAGVSLNPST 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
V+ LED++ ++D++LIM+VNPGFGGQ+ I+S I KI++ L +++ + +DGG++
Sbjct: 124 NVSTLEDILPDLDLVLIMSVNPGFGGQKFIKSAIDKIKKLAQLRQEKNPDLVIAIDGGIS 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+N +V AG + L+ GS+FF + K++
Sbjct: 184 PKNAGEVVAAGGNALIAGSAFFKAEDPFEVVKKMK 218
>gi|53715186|ref|YP_101178.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis YCH46]
gi|52218051|dbj|BAD50644.1| ribulose-phosphate 3-epimerase [Bacteroides fragilis YCH46]
gi|301164633|emb|CBW24192.1| putative ribulose-phosphate 3-epimerase [Bacteroides fragilis 638R]
Length = 216
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 85/218 (38%), Positives = 129/218 (59%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ L ++I I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFAYLAKDIEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP
Sbjct: 59 TSKPLDVHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQQIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+A+L+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+++ + LI + +EVDGGV
Sbjct: 119 TPIALLQDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVKELRELIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD LV G++ F + + L
Sbjct: 179 NLETGARLIAAGADALVAGNAIFAAENPEGMIHAMKGL 216
>gi|54025573|ref|YP_119815.1| ribulose-phosphate 3-epimerase [Nocardia farcinica IFM 10152]
gi|54017081|dbj|BAD58451.1| putative ribulose-5-phosphate 3-epimerase [Nocardia farcinica IFM
10152]
Length = 227
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 6/219 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+ L +E + G+ +H DVMD FVPN++ G V++SL +D
Sbjct: 11 MIAPSILSADFAHLADEARRVE--GSDWLHVDVMDAHFVPNLTLGLPVVQSLLKATDIPL 68
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI A+AG +TFH E++ R I A G K G+++ P TP+
Sbjct: 69 DCHLMIEDPGRWAPPYAEAGAHNVTFHAEATDDPVAVARDIRAAGAKAGLSVKPNTPIEP 128
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+++ D +L+M+V PGFGGQ I + K R + L+ + + +E+DGG+ + I
Sbjct: 129 YLEILKHFDTLLVMSVEPGFGGQSFIPHVLDKARTVRRLVDSGELRLLVEIDGGINADTI 188
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +AG D V GS+ +N + +L +++A A
Sbjct: 189 EQAAEAGIDCFVAGSAVYNTDDPGATVAKLR--RQAAAA 225
>gi|238916661|ref|YP_002930178.1| ribulose-phosphate 3-epimerase [Eubacterium eligens ATCC 27750]
gi|238872021|gb|ACR71731.1| ribulose-phosphate 3-epimerase [Eubacterium eligens ATCC 27750]
Length = 222
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF +LGEE+ I KAGA+ +H DVMDG FV +ISFG VI+S RS +D VF
Sbjct: 7 ILSPSILSADFKKLGEELETIDKAGAEYVHVDVMDGLFVKSISFGMPVIKSARSATDKVF 66
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +I AG DIIT H E+ + +L I G K + +NP TPV+
Sbjct: 67 DVHLMIEEPIRYIEDFVKAGADIITVHVEACKDVVATLEKIKECGVKAAITLNPPTPVSA 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E +D++DM+L+M+VNPGFGGQ+ I ++ K+++ ++L+ + + +E+DGGV + N+
Sbjct: 127 IEPYLDKVDMVLVMSVNPGFGGQKFIPESLDKVKEIRSLLDAKGLDTDIEIDGGVNAGNL 186
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
S+++AGA+++V GS+ F K+ ++
Sbjct: 187 ASVLEAGANVIVAGSAIF-SGDVADNVKKFKEI 218
>gi|239636299|ref|ZP_04677301.1| ribulose-phosphate 3-epimerase [Staphylococcus warneri L37603]
gi|239597654|gb|EEQ80149.1| ribulose-phosphate 3-epimerase [Staphylococcus warneri L37603]
Length = 214
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+++PS+L+ DF L +E+ + +AG +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 3 KVLPSLLSVDFLNLKDELVKLEEAGVDGLHFDVMDGQFVPNISIGIPILDAVRQQSKLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I + AD G D+I+ H E++ HI R++ I GKK GV INP TPV+
Sbjct: 63 DVHLMIENPEQYIELFADHGADLISVHLEATAHIHRAIEQIKNKGKKAGVVINPGTPVSQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+ +I+ +D +LIMTVNPGFGGQ IE + K+ + L ++ + +EVDGG+
Sbjct: 123 ILPIINAVDYVLIMTVNPGFGGQSFIEDCVDKVLELNTLKNEKQLTFDIEVDGGINVETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ V+ GA +LV GS FF Q + ++L
Sbjct: 183 EICVKNGATMLVTGSYFFKQDDYQAVTQKLK 213
>gi|213513738|ref|NP_001135377.1| ribulose-phosphate 3-epimerase [Salmo salar]
gi|209738366|gb|ACI70052.1| Ribulose-phosphate 3-epimerase [Salmo salar]
gi|223647070|gb|ACN10293.1| Ribulose-phosphate 3-epimerase [Salmo salar]
gi|223672939|gb|ACN12651.1| Ribulose-phosphate 3-epimerase [Salmo salar]
Length = 228
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 86/223 (38%), Positives = 125/223 (56%), Gaps = 4/223 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S +I PSIL++D + LG E + + GA +H DVMDG FVPNI+FG ++ LRS
Sbjct: 1 MSYSAKIGPSILSSDLACLGSECVRMMECGADYLHLDVMDGHFVPNITFGHPMVECLRSC 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH ES+ + ++ I G K G+AI
Sbjct: 61 VGPDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLESTTNAGNLIKEIRETGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ ++ S+ +EVDGGV
Sbjct: 121 PGTTVEELAPWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA+++V GS+ + S L A+
Sbjct: 179 GPSTIHKCAEAGANMIVSGSAVVSSDDPRSVITMLRTAVSEAM 221
>gi|219682438|ref|YP_002468822.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219622171|gb|ACL30327.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311086259|gb|ADP66341.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086834|gb|ADP66915.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 228
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
+ PSIL+ADF+RLGE+I + AG+ IHFDVMD +VPN+S G ++ SLR+Y+ +
Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D+ I A AG ITFHPE++ HI R+L I G K G+A NP TP+
Sbjct: 66 DVHLMVKPVDNLIPQFAKAGATFITFHPEATLHIERTLNLIKENGCKAGLAFNPATPLNF 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ +++++D+IL+M+VNPGFG Q + ST K+R+ + +I I LEVDGGV NI
Sbjct: 126 LDYILEKLDLILLMSVNPGFGNQSFLPSTFNKLREVRKIIDANFSHILLEVDGGVKLDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGA++ V+GS F +++
Sbjct: 186 ADIACAGANVFVMGSGLFKYSNYKLVIEKIRK 217
>gi|15924212|ref|NP_371746.1| ribulose-5-phosphate 3-epimerase-like protein [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926805|ref|NP_374338.1| hypothetical protein SA1065 [Staphylococcus aureus subsp. aureus
N315]
gi|21282834|ref|NP_645922.1| hypothetical protein MW1105 [Staphylococcus aureus subsp. aureus
MW2]
gi|49483385|ref|YP_040609.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486061|ref|YP_043282.1| putative ribulose-phosphate 3-epimerase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57651790|ref|YP_186096.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
COL]
gi|82750826|ref|YP_416567.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus RF122]
gi|87161501|ref|YP_493812.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194928|ref|YP_499728.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148267713|ref|YP_001246656.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
JH9]
gi|150393771|ref|YP_001316446.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
JH1]
gi|151221344|ref|YP_001332166.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979543|ref|YP_001441802.1| ribulose-5-phosphate 3-epimerase-like protein [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509394|ref|YP_001575053.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142012|ref|ZP_03566505.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253315580|ref|ZP_04838793.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253731839|ref|ZP_04866004.1| ribulose-5-phosphate 3-epimerase family protein [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253733540|ref|ZP_04867705.1| ribulose-5-phosphate 3-epimerase family protein [Staphylococcus
aureus subsp. aureus TCH130]
gi|255006009|ref|ZP_05144610.2| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425275|ref|ZP_05601700.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427935|ref|ZP_05604333.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430568|ref|ZP_05606950.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433329|ref|ZP_05609687.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436171|ref|ZP_05612218.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M876]
gi|257795722|ref|ZP_05644701.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9781]
gi|258415946|ref|ZP_05682216.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9763]
gi|258419693|ref|ZP_05682660.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9719]
gi|258423735|ref|ZP_05686621.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9635]
gi|258438735|ref|ZP_05689888.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9299]
gi|258444559|ref|ZP_05692888.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8115]
gi|258447608|ref|ZP_05695752.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A6300]
gi|258449450|ref|ZP_05697553.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A6224]
gi|258452519|ref|ZP_05700525.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A5948]
gi|258454829|ref|ZP_05702793.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A5937]
gi|262048120|ref|ZP_06021007.1| hypothetical protein SAD30_1896 [Staphylococcus aureus D30]
gi|262051853|ref|ZP_06024069.1| hypothetical protein SA930_1403 [Staphylococcus aureus 930918-3]
gi|269202837|ref|YP_003282106.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ED98]
gi|282892708|ref|ZP_06300943.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8117]
gi|282903775|ref|ZP_06311663.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C160]
gi|282905539|ref|ZP_06313394.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908515|ref|ZP_06316345.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910794|ref|ZP_06318597.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913997|ref|ZP_06321784.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M899]
gi|282916471|ref|ZP_06324233.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
D139]
gi|282918919|ref|ZP_06326654.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C427]
gi|282920004|ref|ZP_06327733.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9765]
gi|282924042|ref|ZP_06331718.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C101]
gi|282927562|ref|ZP_06335178.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A10102]
gi|283770283|ref|ZP_06343175.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
H19]
gi|283957963|ref|ZP_06375414.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284024146|ref|ZP_06378544.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
132]
gi|293501030|ref|ZP_06666881.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509989|ref|ZP_06668697.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M809]
gi|293526577|ref|ZP_06671262.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M1015]
gi|294848215|ref|ZP_06788962.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9754]
gi|295407160|ref|ZP_06816961.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8819]
gi|295427707|ref|ZP_06820339.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275243|ref|ZP_06857750.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MR1]
gi|297208134|ref|ZP_06924565.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297245954|ref|ZP_06929813.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8796]
gi|297591334|ref|ZP_06949972.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MN8]
gi|300912214|ref|ZP_07129657.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381215|ref|ZP_07363868.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|13701022|dbj|BAB42317.1| cfxE [Staphylococcus aureus subsp. aureus N315]
gi|14246992|dbj|BAB57384.1| ribulose-5-phosphate 3-epimerase homolog [Staphylococcus aureus
subsp. aureus Mu50]
gi|21204273|dbj|BAB94970.1| cfxE [Staphylococcus aureus subsp. aureus MW2]
gi|49241514|emb|CAG40200.1| putative ribulose-phosphate 3-epimerase [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49244504|emb|CAG42933.1| putative ribulose-phosphate 3-epimerase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57285976|gb|AAW38070.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
COL]
gi|82656357|emb|CAI80775.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus RF122]
gi|87127475|gb|ABD21989.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202486|gb|ABD30296.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740782|gb|ABQ49080.1| ribulose-5-phosphate 3-epimerase [Staphylococcus aureus subsp.
aureus JH9]
gi|149946223|gb|ABR52159.1| Ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
JH1]
gi|150374144|dbj|BAF67404.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721678|dbj|BAF78095.1| ribulose-5-phosphate 3-epimerase homolog [Staphylococcus aureus
subsp. aureus Mu3]
gi|160368203|gb|ABX29174.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724438|gb|EES93167.1| ribulose-5-phosphate 3-epimerase family protein [Staphylococcus
aureus subsp. aureus USA300_TCH959]
gi|253728594|gb|EES97323.1| ribulose-5-phosphate 3-epimerase family protein [Staphylococcus
aureus subsp. aureus TCH130]
gi|257271732|gb|EEV03870.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274776|gb|EEV06263.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278696|gb|EEV09315.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281422|gb|EEV11559.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284453|gb|EEV14573.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M876]
gi|257789694|gb|EEV28034.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9781]
gi|257839282|gb|EEV63756.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9763]
gi|257844278|gb|EEV68660.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9719]
gi|257845967|gb|EEV69995.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9635]
gi|257847994|gb|EEV71987.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9299]
gi|257850052|gb|EEV74005.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8115]
gi|257853799|gb|EEV76758.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A6300]
gi|257857438|gb|EEV80336.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A6224]
gi|257859737|gb|EEV82579.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A5948]
gi|257863212|gb|EEV85976.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A5937]
gi|259160254|gb|EEW45282.1| hypothetical protein SA930_1403 [Staphylococcus aureus 930918-3]
gi|259163686|gb|EEW48241.1| hypothetical protein SAD30_1896 [Staphylococcus aureus D30]
gi|262075127|gb|ACY11100.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ED98]
gi|269940714|emb|CBI49095.1| putative ribulose-phosphate 3-epimerase [Staphylococcus aureus
subsp. aureus TW20]
gi|282314014|gb|EFB44406.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C101]
gi|282316729|gb|EFB47103.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C427]
gi|282319911|gb|EFB50259.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
D139]
gi|282322065|gb|EFB52389.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M899]
gi|282325399|gb|EFB55708.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327577|gb|EFB57860.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330831|gb|EFB60345.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590565|gb|EFB95642.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A10102]
gi|282594720|gb|EFB99704.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9765]
gi|282595393|gb|EFC00357.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
C160]
gi|282764705|gb|EFC04830.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8117]
gi|283460430|gb|EFC07520.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
H19]
gi|283470434|emb|CAQ49645.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ST398]
gi|283790112|gb|EFC28929.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816904|gb|ADC37391.1| Ribulose-phosphate 3-epimerase [Staphylococcus aureus 04-02981]
gi|290920649|gb|EFD97712.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M1015]
gi|291096035|gb|EFE26296.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466933|gb|EFF09451.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
M809]
gi|294825015|gb|EFG41437.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A9754]
gi|294968013|gb|EFG44041.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8819]
gi|295128065|gb|EFG57699.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887377|gb|EFH26279.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297177118|gb|EFH36372.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus A8796]
gi|297576220|gb|EFH94936.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MN8]
gi|298694515|gb|ADI97737.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ED133]
gi|300886460|gb|EFK81662.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332826|gb|ADL23019.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302751045|gb|ADL65222.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340198|gb|EFM06139.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312438401|gb|ADQ77472.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
TCH60]
gi|312829616|emb|CBX34458.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315131013|gb|EFT86997.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194108|gb|EFU24501.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198459|gb|EFU28788.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320144322|gb|EFW36088.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323442313|gb|EGA99943.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus O46]
gi|329313891|gb|AEB88304.1| Ribulose-5-phosphate 3-epimerase [Staphylococcus aureus subsp.
aureus T0131]
gi|329724747|gb|EGG61252.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
21189]
gi|329727702|gb|EGG64158.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
21172]
gi|329728817|gb|EGG65238.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
21193]
Length = 214
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ DF L E+ + +AG +HFDVMDG FVPNIS G ++ ++R +
Sbjct: 3 KLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I A+ G D+I+ H ES+PHI R+++ I + KK GV INP TP++
Sbjct: 63 DVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+E ++D +D +L+MTVNPGFGGQ I+ + KI A+ +R + +EVDGGV +
Sbjct: 123 IEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTDTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K V+ GA +LV GS FF Q+ + L
Sbjct: 183 KVCVENGATMLVTGSFFFKQEDYKKVTQALK 213
>gi|145224310|ref|YP_001134988.1| ribulose-phosphate 3-epimerase [Mycobacterium gilvum PYR-GCK]
gi|315444642|ref|YP_004077521.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. Spyr1]
gi|145216796|gb|ABP46200.1| ribulose-5-phosphate 3-epimerase [Mycobacterium gilvum PYR-GCK]
gi|315262945|gb|ADT99686.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. Spyr1]
Length = 225
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 82/221 (37%), Positives = 126/221 (57%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P I PSILAADF+RL EE + + GA +H DVMD FVPN++ G V+ SL +
Sbjct: 1 MPKPLIAPSILAADFARLAEEAAAVD--GADWLHVDVMDNHFVPNLTLGLPVVESLLKVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D DCHLMI + + A+AG +T H E++ + R I A G K G++I P T
Sbjct: 59 DIPMDCHLMIENPERWAPPYAEAGAYNVTIHAEATDNPVAVARDIRAAGAKAGLSIKPGT 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
P+ +++ E D +L+M+V PGFGGQ+ I +PK+ A+ L+ + +I +E+DGG+
Sbjct: 119 PIEPYLEILREFDTLLVMSVEPGFGGQKFIAEVLPKVGIARRLVDSGELTIVIEIDGGIN 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I+ +AG D V GS+ ++ + + + L +A
Sbjct: 179 ADTIEEAAEAGVDCFVAGSAVYSAEDPAAAVQSLRSQAAAA 219
>gi|321460251|gb|EFX71295.1| hypothetical protein DAPPUDRAFT_308929 [Daphnia pulex]
Length = 231
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 79/220 (35%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYS 61
P +I PSIL AD S L +E + +GA +H DVMDG FVPN++FG +++ LR
Sbjct: 7 PCCKIGPSILCADLSCLADECRRMIHSGADYLHLDVMDGHFVPNLTFGHPIVKCLRPKMP 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D FD H+M+ + + + +ADAG + TFH E+ I R I G + GV + P T
Sbjct: 67 DVYFDMHMMVQNPEKWVESMADAGANQYTFHVEACEDIPALCRKIQESGMRVGVGLKPGT 126
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV + D D++LIMTV PGFGGQ+ +E + K++ + + +EVDGGV
Sbjct: 127 PVETILPYSDLFDVVLIMTVEPGFGGQRFMEDMMSKVQYLRTNF--PDLDIEVDGGVGPS 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I + +AGA+++V G++ L + ++A+
Sbjct: 185 TIDVVAEAGANMIVSGTAITGATDPSQVIALLRNSVENAI 224
>gi|311113843|ref|YP_003985065.1| ribulose-phosphate 3-epimerase [Rothia dentocariosa ATCC 17931]
gi|310945337|gb|ADP41631.1| ribulose-phosphate 3-epimerase [Rothia dentocariosa ATCC 17931]
Length = 239
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL+ADF+ L E+ I + A H DVMD FVPN+++G V++ LR S
Sbjct: 2 SVAINPSILSADFANLQHELERI--STADAAHIDVMDNHFVPNLTWGPPVVKRLREVSPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI D AD G + +TFH E++ + RT+ G K G+A+ P T V
Sbjct: 60 PFDVHLMIDDPDRWAPQYADVGSESVTFHAEAATAPIKLARTLRESGAKAGLALRPATAV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
D++ EIDM+LIMTV PGFGGQ+ ++ T+PKIR+A + + I L+VDGG+T
Sbjct: 120 EPYLDLLTEIDMLLIMTVEPGFGGQKFLDVTLPKIRRAASALEGSGIPVRLQVDGGITEE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I +AGAD V GSS + + + L L +S
Sbjct: 180 TIVRAAEAGADCFVAGSSVYGAEDPQTAIAALRSLGES 217
>gi|224060236|ref|XP_002300099.1| predicted protein [Populus trichocarpa]
gi|118488638|gb|ABK96131.1| unknown [Populus trichocarpa]
gi|222847357|gb|EEE84904.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 129/227 (56%), Gaps = 9/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR +
Sbjct: 1 MGVAAKIAPSMLSSDFANLASEAQRMLDCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINP 119
+ + DCHLM+++ ++ + AG TFH E S ++ I + G + GV++ P
Sbjct: 61 TKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEVSRDNWGDLVQRIKSKGMRPGVSLKP 120
Query: 120 ETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
TP+ + +++ ++M+L+MTV PGFGGQ+ + T+ K+R + S+ +EVDG
Sbjct: 121 GTPIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPETMDKVRTLRK--KYPSLDIEVDG 178
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
G+ I AGA+ +V GSS F A+ ++ L+KS +
Sbjct: 179 GLGPSTIDMAASAGANCIVAGSSVFGAPDS---AQVISLLRKSVEEV 222
>gi|319948959|ref|ZP_08023064.1| ribulose-phosphate 3-epimerase [Dietzia cinnamea P4]
gi|319437397|gb|EFV92412.1| ribulose-phosphate 3-epimerase [Dietzia cinnamea P4]
Length = 222
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 82/224 (36%), Positives = 124/224 (55%), Gaps = 4/224 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSIL+ADF+RL EI I A IH DVMDG FVPN+SFGA V ++
Sbjct: 1 MSYQPLIAPSILSADFARLDREIERIPS--ADWIHVDVMDGHFVPNLSFGAPVAAAVGRV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D DCHLMI + + DAG +T+H E++ +H G + G++I P
Sbjct: 59 TDKPMDCHLMIENPLRWVGDYVDAGAANVTYHLEAADDPVAVADLLHVKGSRAGISIKPG 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP + +V+D +D++L+M+V PGFGGQ+ + + K+R +A I +R + +++DGG+
Sbjct: 119 TPAEMCFEVLDHVDLVLVMSVEPGFGGQKFMPEVLDKVRALRAEIDRRGLDVLIQIDGGI 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I AG D+ V GS+ + + L D +A A
Sbjct: 179 DADTIGECAAAGCDVFVAGSAVYGAPDPDAMIGTLRDRALAARA 222
>gi|331269678|ref|YP_004396170.1| Ribulose-phosphate 3-epimerase [Clostridium botulinum BKT015925]
gi|329126228|gb|AEB76173.1| Ribulose-phosphate 3-epimerase [Clostridium botulinum BKT015925]
Length = 216
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 143/216 (66%), Gaps = 5/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFS+LGE+I ++ K GA IH DVMDG FVPNISFG +++S+R+ +
Sbjct: 2 VKLAPSILSADFSKLGEDIKSLDKYGADMIHIDVMDGMFVPNISFGIPIMKSIRNITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I A +G DIIT H E+ H+ R++ I + G K GVAINP TP+
Sbjct: 62 FDVHLMIEDPARYIEDFAKSGADIITVHYEADKHLDRTVNYIKSFGVKAGVAINPATPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
++ +I DM+LIM+VNPGFGGQ+ I KI++ KA+ K + + ++VDGGV N
Sbjct: 122 SIKHIIPIADMVLIMSVNPGFGGQKYINYCSEKIKEVKAIAEKFNKDLLIQVDGGVGINN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V++GA+++V GS+ F K + +LK+
Sbjct: 182 IKHVVESGANVIVAGSAVFKNG---EIEKNIKELKE 214
>gi|308321268|gb|ADO27786.1| ribulose-phosphate 3-epimerase [Ictalurus furcatus]
Length = 228
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL++D S+LG E + + GA +H DVMDG FVPNI+FG ++ LR
Sbjct: 1 MAYTAKIGPSILSSDLSQLGRECERMMECGADYLHLDVMDGRFVPNITFGHPMVECLRKA 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ FD H+M+SS + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 VGPNPFFDMHMMVSSPEQWVKPMAAAGANQYTFHLEATTNPGSLIKEIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEELAQWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ + L D
Sbjct: 179 GPDTIHRCAEAGANMIVSGSAVLGSADPRTVIALLKD 215
>gi|255590629|ref|XP_002535323.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
gi|223523461|gb|EEF27061.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
Length = 228
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 138/219 (63%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V +++R +
Sbjct: 1 MT-TYRIAPSILSADFARLGEEVRNVVAAGADIIHFDVMDNHYVPNLTIGPLVCQAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D I A AG DIITFHPE+S HI R+L+ I G K G+ NP
Sbjct: 60 VQVPIDVHLMVKPVDRIIPDFAKAGADIITFHPEASEHIDRTLQLIRDNGCKAGLVFNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS----ISLEVDG 176
TP+ LE V+D+IDM+LIM+VNPGFGGQ I + KI A+ +I + I LEVDG
Sbjct: 120 TPLHYLEHVMDKIDMVLIMSVNPGFGGQSFIPEALKKIALARRMIDQSGRGSDIMLEVDG 179
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
G+ + NI + +AGAD V GS+ F + + +
Sbjct: 180 GIKADNIAAAAEAGADTFVAGSAIFGKPDYKAVIDAMRA 218
>gi|16801869|ref|NP_472137.1| hypothetical protein lin2808 [Listeria innocua Clip11262]
gi|16415344|emb|CAC98034.1| lin2808 [Listeria innocua Clip11262]
Length = 214
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I +AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEQAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+ ++ ++D++L MTVNPGFGGQ I+STI +R + + +EVDGGV + +
Sbjct: 124 DAILGDVDLVLQMTVNPGFGGQSFIDSTIENMRYLDNWRQENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF +++ + L
Sbjct: 184 KCKQAGVDVLVAGSYFFGADDKVACVQGLKK 214
>gi|330993137|ref|ZP_08317075.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter sp. SXCC-1]
gi|329759907|gb|EGG76413.1| Ribulose-phosphate 3-epimerase [Gluconacetobacter sp. SXCC-1]
Length = 225
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 134/216 (62%), Gaps = 5/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADFSR +E++ + + GA +H DVMDG FVPN+S G ++++LR S FD
Sbjct: 9 IAPSLLAADFSRAADEVAAVERGGADWLHLDVMDGHFVPNLSMGPQLVQALRPKSKLAFD 68
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +D +I A AG D I H E+ PH RSL+ + G K G+AI P TP +
Sbjct: 69 VHLMIAPVDPYIEAFAKAGADHIHLHVEAGPHTHRSLQHVRDHGVKPGIAICPATPPEAV 128
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
+V+D +DMIL+MTVNPGFGGQ+ + S + KI + + R I + VDGG+T+
Sbjct: 129 GEVLDLVDMILVMTVNPGFGGQKFLTSQLRKITTLRRMADATGRDIRIGVDGGITAHTAP 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V AGAD+L+ G+S + Q YA + DL+ A
Sbjct: 189 LAVAAGADVLIAGTSVYGQDD---YAAAIRDLRSGA 221
>gi|332365860|gb|EGJ43617.1| ribulose-phosphate 3-epimerase [Streptococcus sanguinis SK355]
Length = 219
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 92/203 (45%), Positives = 131/203 (64%), Gaps = 2/203 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PSIL+AD++ E+ + GA+ H D+MDG FVPNISFGA V+ S+R +S
Sbjct: 3 SFKIAPSILSADYANFESELKKLEATGAEYAHIDIMDGHFVPNISFGAGVVASMRPHSKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
VFDCHLM+S+ + HI A AG DII+ H E++PHI +L+ I A G K V INP TPV
Sbjct: 63 VFDCHLMVSNPEHHIEEFARAGADIISIHAEATPHIHGALQKIRAAGVKPSVVINPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGVTSR 181
+++V++ +D +L+MTVNPGFGGQ + T+ KIR+ + + + +EVDGG+ +
Sbjct: 123 EAVKNVLNLVDQVLVMTVNPGFGGQAFLPETMDKIRELVVLREVNQLNFDIEVDGGIDDK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
I +AGA++ V GS F
Sbjct: 183 TIGIAKEAGANVFVAGSYVFKGD 205
>gi|58039796|ref|YP_191760.1| ribulose-phosphate 3-epimerase [Gluconobacter oxydans 621H]
gi|58002210|gb|AAW61104.1| Ribulose-phosphate 3-epimerase [Gluconobacter oxydans 621H]
Length = 225
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 109/218 (50%), Positives = 147/218 (67%), Gaps = 6/218 (2%)
Query: 1 MT--PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
MT PSI + PS+LAADFSRLGEEI++I A A +H DVMDG FVPNISFG +I +LR
Sbjct: 1 MTDRPSIIVAPSLLAADFSRLGEEIASI--ARAPWLHLDVMDGHFVPNISFGPPLIAALR 58
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
++D+ FD HLMI +D ++ A AG D IT H E++PH+ RSL+TI A+G + GVAI
Sbjct: 59 RHTDAKFDVHLMIDPVDPYLEATAKAGADHITVHVENAPHLHRSLQTIRALGCRPGVAIC 118
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDG 176
P TP L +V+D +D+IL+MTVNPGFGGQ ++S + KIR +I + R I L VDG
Sbjct: 119 PATPAVALSEVMDLVDIILVMTVNPGFGGQSFLDSQLSKIRTLAEMIRESGRDIILAVDG 178
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
G+ +V+AGA +LV GS+ F ++ + + L
Sbjct: 179 GIDPSTAPRVVEAGATMLVAGSAIFGKEDRDAAIRALE 216
>gi|60683121|ref|YP_213265.1| putative ribulose-phosphate 3-epimerase [Bacteroides fragilis NCTC
9343]
gi|60494555|emb|CAH09354.1| putative ribulose-phosphate 3-epimerase [Bacteroides fragilis NCTC
9343]
Length = 216
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 84/218 (38%), Positives = 128/218 (58%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ L ++I I ++ A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFAYLAKDIEMINRSEADWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + I + G I+ H E+ PH+ R ++ I G + V INP
Sbjct: 59 TSKPLDVHLMIVNPEKFIPEVKALGAHIMNVHYEACPHLHRVVQLIREAGMQPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ +L+D+I ++ M+L+M+VNPGFGGQ+ IE ++ K+++ + LI + +EVDGGV
Sbjct: 119 TPITLLQDIIRDVYMVLVMSVNPGFGGQKFIEHSVEKVKELRELIERTGSKALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ AGAD LV G++ F + + L
Sbjct: 179 NLETGARLIAAGADALVAGNAIFAAENPEGMIHAMKGL 216
>gi|108799352|ref|YP_639549.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. MCS]
gi|119868468|ref|YP_938420.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. KMS]
gi|126435010|ref|YP_001070701.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. JLS]
gi|108769771|gb|ABG08493.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. MCS]
gi|119694557|gb|ABL91630.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. KMS]
gi|126234810|gb|ABN98210.1| ribulose-5-phosphate 3-epimerase [Mycobacterium sp. JLS]
Length = 224
Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 128/222 (57%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF+RL +E + +T GA +H DVMD FVPN++ G V+ SL
Sbjct: 1 MAHPL-IAPSILSADFARLADETAAVT--GADWLHVDVMDNHFVPNLTLGLPVVESLLKV 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D DCHLMI + + A+AG +TFH E++ + R I A G K G+A+ P
Sbjct: 58 TDIPMDCHLMIENPERWAPPYAEAGAHNVTFHAEATDNPIAVARDIRAAGAKAGLAVKPG 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TP+ +++ E D +L+M+V PGFGGQ+ I +PK+ + L+ + ++ +E+DGG+
Sbjct: 118 TPIDPYLEILREFDTLLVMSVEPGFGGQKFIPEVLPKVGIVRRLVDSGELTVLVEIDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + +AG D V GS+ ++ + + + L + +A
Sbjct: 178 NEDTIAAAAEAGVDCFVAGSAVYSAQDPAAAVRSLREQAAAA 219
>gi|226226027|ref|YP_002760133.1| ribulose-5-phosphate 3-epimerase [Gemmatimonas aurantiaca T-27]
gi|226089218|dbj|BAH37663.1| ribulose-5-phosphate 3-epimerase [Gemmatimonas aurantiaca T-27]
Length = 221
Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 89/215 (41%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS+L+ADF LG+EI+ GA IH DVMDG FVPN+SFG VI ++R +
Sbjct: 2 TVRIAPSVLSADFRILGDEIAMCEAGGADWIHVDVMDGRFVPNLSFGVKVIEAVRKCTKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLM+ + + + AG D++T H E++PH+ R L I +G K GVA+NP TP+
Sbjct: 62 VVDVHLMVQEPEKYFDDYVKAGADVLTIHVEAAPHLDRQLARIKELGVKAGVALNPGTPL 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
A +E+V+ +D++LIM+VNPG+GGQ+ I+ ++ KI + + L+ + + LEVDGG++
Sbjct: 122 AAIEEVVHMLDLVLIMSVNPGYGGQKFIDYSVDKIERMRFLLDQAESNAVLEVDGGISRD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I+ AGAD V G++ F + L +L
Sbjct: 182 TIQRCWSAGADTFVAGNAIFGAADPRAEIAVLRNL 216
>gi|325981250|ref|YP_004293652.1| ribulose-phosphate 3-epimerase [Nitrosomonas sp. AL212]
gi|325530769|gb|ADZ25490.1| ribulose-phosphate 3-epimerase [Nitrosomonas sp. AL212]
Length = 225
Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 133/205 (64%), Gaps = 2/205 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+A+F++LG+E++++ +GA +HFDVMD +VPN++ G V ++R +D++
Sbjct: 3 RLAPSILSANFAKLGQEVTDVIDSGADIVHFDVMDNHYVPNLTIGPLVCEAIRPVTDAII 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A AG +II+FHPE+S HI R++ I G K G+ NP TP+
Sbjct: 63 DVHLMVQPVDRIIPDFAKAGANIISFHPEASNHIDRTIGLIKEQGCKAGLVFNPATPLHY 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D++LIM+VNPGFGGQ I + K+R + I + I LE+DGGV NI
Sbjct: 123 LDHVLDKLDLVLIMSVNPGFGGQTFIPEALNKLRAVRKRIDASGKDIMLEIDGGVKVDNI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEIS 208
+ +AGAD V GS+ + +
Sbjct: 183 AEIARAGADTFVAGSAVYQAGKDAD 207
>gi|315636788|ref|ZP_07892014.1| ribulose-phosphate 3-epimerase [Arcobacter butzleri JV22]
gi|315478914|gb|EFU69621.1| ribulose-phosphate 3-epimerase [Arcobacter butzleri JV22]
Length = 213
Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 125/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF L EI I AG +H DVMDG FVPN++ G V+ + +
Sbjct: 1 MLVAPSILSADFGNLANEIKAICDAGCDLVHVDVMDGHFVPNMTIGPVVVEPVAKVASKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A I+FH ES H R ++ I + G K + +NP +
Sbjct: 61 LDIHLMVENNTFFVDLFAPCKPLYISFHIESEKHPHRLIQKIRSYGIKPAIVLNPHSRPQ 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +++++DM+L+M+VNPGFGGQ+ I S + K ++ K LI KR+ + +EVDGGV +N
Sbjct: 121 EIEYLLEDLDMVLLMSVNPGFGGQKFIPSVVEKAKELKELINKRNPNCLIEVDGGVNDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+ L AG D++V GS F Y K + LK
Sbjct: 181 IEILKNAGVDIVVAGSYVFGSDD---YEKAIKSLK 212
>gi|330995938|ref|ZP_08319833.1| ribulose-phosphate 3-epimerase [Paraprevotella xylaniphila YIT
11841]
gi|329574277|gb|EGG55852.1| ribulose-phosphate 3-epimerase [Paraprevotella xylaniphila YIT
11841]
Length = 216
Score = 260 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF L E+ I ++ +H D+MDG FVPNISFG V++ + + D
Sbjct: 5 VAPSLLSADFGNLKPEMDMINRSECDWLHIDIMDGVFVPNISFGFPVLKYVARLCEKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +N + G + H E+ PH+ R ++ I G K GV +NP TPV+ L
Sbjct: 65 VHLMIVQPEKFLNEVRALGAYSMNVHVEACPHLHRVVQQIKEAGMKAGVTLNPATPVSSL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
D+I+++D++++M VNPGFGGQ I T+ K+R+ + +I + +EVDGGV +
Sbjct: 125 TDIIEDVDIVMLMAVNPGFGGQAFIPHTLDKVRELRRMIDGSRSKALIEVDGGVNRDTGR 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+LV GS+ F+ I + L +L
Sbjct: 185 LLVEAGADVLVAGSAVFHAADAIEEIRVLKNL 216
>gi|320451057|ref|YP_004203153.1| ribulose-phosphate 3-epimerase [Thermus scotoductus SA-01]
gi|320151226|gb|ADW22604.1| ribulose-phosphate 3-epimerase [Thermus scotoductus SA-01]
Length = 222
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PSIL AD +RL ++I AG IH DVMDG FVPN++FG ++ ++R +
Sbjct: 2 LKFAPSILTADLARLKDQIEEAEAAGVDWIHLDVMDGVFVPNLTFGPLLVEAVRRVTSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ A AG D+IT H E++PH R+++ + +GKK G+AINP TP+
Sbjct: 62 LDVHLMIVQPERYLEDFARAGADVITVHFEATPHAHRAVQKVKELGKKAGLAINPATPLE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
E ++ E+D+ L+M+VNPGFGGQ+ I ++ ++RQ K + + S +EVDGGV
Sbjct: 122 AFEPLLPELDLALLMSVNPGFGGQRYIPTSTGRLRQLKEMRDRLNPSCLIEVDGGVNRDT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + +AGAD+ V GS+ FN++ K L +
Sbjct: 182 VAEVYRAGADVAVAGSALFNRRPVADNLKELKE 214
>gi|209884603|ref|YP_002288460.1| ribulose-phosphate 3-epimerase [Oligotropha carboxidovorans OM5]
gi|209872799|gb|ACI92595.1| ribulose-phosphate 3-epimerase [Oligotropha carboxidovorans OM5]
Length = 233
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 138/208 (66%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+D++RLGEE+ AGA +H DVMDG FVPNIS+G DVI+++R +S+
Sbjct: 8 RPLIIAPSILASDYARLGEEVRAADTAGADWLHLDVMDGHFVPNISYGPDVIKAMRPHSN 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GVA+NP TP
Sbjct: 68 KIFDAHLMIAPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVALNPATP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+E V+D +D++L+M+VNPGFGGQ I + + KI +A+ R I + VDGGVT+ N
Sbjct: 128 ANAIEYVLDLVDIVLVMSVNPGFGGQSFIPTVLEKITTIRAMCAGRPIDITVDGGVTADN 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ AG + LV GS+ F Y
Sbjct: 188 AAQIAAAGGNALVAGSAVFKGGTFEHYK 215
>gi|145588337|ref|YP_001154934.1| ribulose-phosphate 3-epimerase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046743|gb|ABP33370.1| ribulose-5-phosphate 3-epimerase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 241
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 141/227 (62%), Gaps = 14/227 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+ LG+E+ ++ AGA IHFDVMD +VPN++ G V ++R Y+
Sbjct: 9 NRQFLIAPSILSADFACLGKEVQDVLAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPYA 68
Query: 62 DS-----VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
V D HLM+ +D + A AG ++I+FHPE+SPH+ R+L I G + G+
Sbjct: 69 MKNGGAAVIDVHLMVEPVDRIVPDFAKAGANLISFHPEASPHVNRTLNLIRDQGCQAGLV 128
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSI 170
+NP TP+ L+ ++ +D++L+M+VNPGFGGQ I ST+ KI Q +A + + R I
Sbjct: 129 LNPATPLDHLDHTLELLDLVLLMSVNPGFGGQSFIPSTLHKIAQVRARLDRHEAETGRQI 188
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
LEVDGG+ NI + QAGAD V GS+ F ++ YA+ ++ ++
Sbjct: 189 RLEVDGGIKVDNIAQVAQAGADTFVAGSAIFGKEN---YAQVIDAMR 232
>gi|229828527|ref|ZP_04454596.1| hypothetical protein GCWU000342_00591 [Shuttleworthia satelles DSM
14600]
gi|229793121|gb|EEP29235.1| hypothetical protein GCWU000342_00591 [Shuttleworthia satelles DSM
14600]
Length = 216
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 141/212 (66%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+AD+ L ++I+ + +AGA+ IH DVMDG FVPNI+ GA V+RS+R+Y+D + D
Sbjct: 4 LSPSILSADYGHLADDIALVDEAGAQYIHVDVMDGTFVPNITIGAPVVRSIRNYTDKILD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ + +A+AG DIIT H E++ H+ R++ + G+A+NP T + +L
Sbjct: 64 VHMMVEEPARFVPDMAEAGADIITVHAEATRHLDRTIAAVKEQKVMVGLALNPATSLDVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E V+ ++DM+L+M+VNPGFGGQ+ I TI K++Q + ++ ++ I +EVDGG+ N+
Sbjct: 124 EYVLPQLDMVLLMSVNPGFGGQEFIPYTIDKLQQLRQMMDRQGLDIDIEVDGGINLENVT 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ AGA+++V GS+ + + + L +
Sbjct: 184 DVLNAGANIIVAGSAVYRGDAADNVQRFLEIM 215
>gi|120403673|ref|YP_953502.1| ribulose-phosphate 3-epimerase [Mycobacterium vanbaalenii PYR-1]
gi|119956491|gb|ABM13496.1| ribulose-5-phosphate 3-epimerase [Mycobacterium vanbaalenii PYR-1]
Length = 234
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 82/221 (37%), Positives = 125/221 (56%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S I PSILAADF+RL EE + + GA +H DVMD FVPN++ G V+ SL +
Sbjct: 10 KKSPLIAPSILAADFARLAEETAAVE--GADWLHVDVMDNHFVPNLTLGLPVVESLLKAT 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D DCHLMI + + A+AG +T H E++ + R I A G K G+++ P T
Sbjct: 68 DIPMDCHLMIENPERWAPPYAEAGAYNVTIHAEATDNPVAVARDIRAAGAKAGLSVKPGT 127
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
P+ ++ E D +L+M+V PGFGGQ+ I +PK+ A+ L+ + +I +E+DGG+
Sbjct: 128 PLEPYLQILREFDTLLVMSVEPGFGGQKFIAEVLPKVGIARRLVDAGELTIVIEIDGGIN 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I++ +AG D V GS+ ++ + + L SA
Sbjct: 188 ADTIEAAAEAGVDCFVAGSAVYSAQDPAAAVHSLRKQAASA 228
>gi|57237505|ref|YP_178519.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni RM1221]
gi|157414744|ref|YP_001482000.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81116]
gi|205355327|ref|ZP_03222098.1| ribulose phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|283955873|ref|ZP_06373363.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
1336]
gi|57166309|gb|AAW35088.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni RM1221]
gi|157385708|gb|ABV52023.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81116]
gi|205346561|gb|EDZ33193.1| ribulose phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|283792533|gb|EFC31312.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
1336]
gi|315057871|gb|ADT72200.1| Ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
S3]
gi|315931110|gb|EFV10084.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
327]
Length = 215
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ I+FH ES H R I + G + +NP TP+
Sbjct: 61 LDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L ++GAD+LV GS F+ + L
Sbjct: 181 ASDLEESGADILVAGSYIFSSNDYKTAISSLK 212
>gi|19552810|ref|NP_600812.1| ribulose-phosphate 3-epimerase [Corynebacterium glutamicum ATCC
13032]
gi|62390480|ref|YP_225882.1| ribulose-phosphate 3-epimerase [Corynebacterium glutamicum ATCC
13032]
gi|21324367|dbj|BAB98991.1| Pentose-5-phosphate-3-epimerase [Corynebacterium glutamicum ATCC
13032]
gi|41325817|emb|CAF21606.1| RIBULOSE-5-PHOSPHATE-3-EPIMERASE [Corynebacterium glutamicum ATCC
13032]
Length = 219
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 124/214 (57%), Gaps = 4/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFSRLGE++ + A IH D+MDG FVPN+SFGAD+ ++ +D D
Sbjct: 8 IAPSILAADFSRLGEQVLAVPD--ADWIHVDIMDGHFVPNLSFGADITAAVNRVTDKELD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ DAG D I FH E++ + I + G + G ++ P TP+
Sbjct: 66 VHLMIENPEKWVDNYIDAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGTPIEDY 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D ++ D +++M+V PGFGGQ + + K+R + +I +R ++ +E+DGG++++ IK
Sbjct: 126 LDDLEHFDEVIVMSVEPGFGGQSFMPEQLEKVRTLRKVIDERGLNTVIEIDGGISAKTIK 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AG D V GS+ + + + L L +
Sbjct: 186 QAADAGVDAFVAGSAVYGAEDPNKAIQELRALAQ 219
>gi|156545295|ref|XP_001607477.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase [Nasonia
vitripennis]
Length = 224
Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
+ +I PSIL AD S+L EE + +GA +H DVMDG FVPN++FG +++ LR D
Sbjct: 6 TAKIGPSILNADLSQLSEECRRLLDSGADYLHLDVMDGHFVPNLTFGHPLVKCLRAKVKD 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ F+ H+M+S I +ADAG D TFH E + R I G K GVA+ P TP
Sbjct: 66 AFFETHMMVSKPQQWIEPMADAGVDQYTFHVEPVEDVPLVCRKIREAGMKVGVALKPGTP 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V ++ + ++E DM+L+MTV PGFGGQ+ ++S + K+ + + +EVDGGV
Sbjct: 126 VEVVTEYVNEADMVLVMTVEPGFGGQKFMDSMMKKVSWLRQ--NYPDLDIEVDGGVGPST 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I + +AGA+++V G++ N K L +AL
Sbjct: 184 INACAEAGANMIVSGTAVINASDPAKVIKDLKCTVNNAL 222
>gi|41386741|ref|NP_958469.1| ribulose-phosphate 3-epimerase [Danio rerio]
gi|37747988|gb|AAH59555.1| Ribulose-5-phosphate-3-epimerase [Danio rerio]
gi|220941752|emb|CAX15453.1| ribulose-5-phosphate-3-epimerase [Danio rerio]
Length = 228
Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 127/223 (56%), Gaps = 4/223 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL++D S+LG E + + GA +H DVMDG FVPNI+FG ++ LRS
Sbjct: 1 MAYTAKIGPSILSSDLSQLGRECERMMECGADYLHLDVMDGHFVPNITFGHPMVECLRSC 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 IGPDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLEATSNPGNLIKEIRESGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEELAPWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRGQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+I +AGA+++V GS+ + S L ++ A+
Sbjct: 179 GPDSIHRCAEAGANMIVSGSAVVSSDDPRSVIALLKNVVMEAI 221
>gi|319899938|ref|YP_004159666.1| ribulose-5-phosphate 3-epimerase [Bacteroides helcogenes P 36-108]
gi|319414969|gb|ADV42080.1| ribulose-5-phosphate 3-epimerase [Bacteroides helcogenes P 36-108]
Length = 217
Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 129/218 (59%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF L +I I ++ A+ +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSADFGYLARDIEMINQSEAEWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+ D HLMI + I + G I+ H E+ PH+ R ++ I G + + INP
Sbjct: 59 SEKPLDVHLMIVQPEKFIPEVKALGAYIMNVHYEACPHLHRVVQQIREAGMQPAITINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPVA+L+DVI ++ M+L+M+VNPGFGGQ+ IE +I K+R+ + LI +EVDGGV
Sbjct: 119 TPVAMLKDVIRDVYMVLVMSVNPGFGGQKFIEHSIEKVRELRELISITGSQALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD LV G+ F+ + L +L
Sbjct: 179 NLETGARLVKAGADALVAGNFVFSATDPEEAIRTLRNL 216
>gi|307720493|ref|YP_003891633.1| ribulose-5-phosphate 3-epimerase [Sulfurimonas autotrophica DSM
16294]
gi|306978586|gb|ADN08621.1| ribulose-5-phosphate 3-epimerase [Sulfurimonas autotrophica DSM
16294]
Length = 213
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+Q+ PSIL+ADF L ++ I AG +H D+MDG FVPN++ G V+ ++ +
Sbjct: 1 MQVAPSILSADFGNLARDVQEICDAGCDLVHVDIMDGHFVPNLTIGPVVVSAIAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A I+FH E H R ++ I ++G K + +NP T
Sbjct: 61 LDIHLMVENNTFFVELFAPLKPQYISFHIEEEKHPHRLIQKIRSLGIKPCIVLNPNTIPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE +++++DM+L+M+VNPGFGGQ IES +PK ++ + + + ++VDGGV+ +N
Sbjct: 121 ELEYILEDLDMVLLMSVNPGFGGQTFIESVLPKAKKLNEMRKRLNPECLIQVDGGVSDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +L +AG D++V GS F + K L
Sbjct: 181 IHALKEAGVDVVVAGSYVFKHEDRAKAIKSLQ 212
>gi|73662859|ref|YP_301640.1| ribulose-phosphate 3-epimerase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495374|dbj|BAE18695.1| putative ribulose-phosphate 3-epimerase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 214
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ADF L +E++ + KAG +HFDVMDG FVPNIS G ++ S+R +D
Sbjct: 3 KLYPSLLSADFLNLQQELTALEKAGVDGVHFDVMDGQFVPNISIGLPILDSVRKGTDLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ + A+ G D+I+ H E++PHI R + I K GV INP TPV
Sbjct: 63 DVHLMIEEPEKYVELFAEHGADMISVHVEATPHIHRVIEQIKNKNVKAGVVINPGTPVDS 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+ V+ +D +L+MTVNPGFGGQ I + K+ Q + + + +EVDGG+ + +
Sbjct: 123 IRPVLKMVDYVLVMTVNPGFGGQTFINDCVEKLDQLSEIKKAQGLNFDIEVDGGINNNTV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++V GA +LV GS FF + L
Sbjct: 183 ETVVNHGATMLVAGSYFFKHDDYQTVTNTLK 213
>gi|189499510|ref|YP_001958980.1| Ribulose-phosphate 3-epimerase [Chlorobium phaeobacteroides BS1]
gi|189494951|gb|ACE03499.1| Ribulose-phosphate 3-epimerase [Chlorobium phaeobacteroides BS1]
Length = 221
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M P + + PSIL+ADF++L E I+ KAGA +H DVMDG FVPNI+FG +I+++
Sbjct: 1 MQPANTLLAPSILSADFTKLAESIALAEKAGADWMHCDVMDGHFVPNITFGPFIIKAIAQ 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ V D HLMIS D++I AG + IT H E+ H+ RS++ I ++G K GV+INP
Sbjct: 61 CTNLVIDTHLMISDPDTYIADFIQAGSNQITVHQETCAHLHRSVQLIKSLGAKAGVSINP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TPV+ LE ++ ++D++L+M+VNPGFGGQ+ I S+ K+R+ + + L VDGG
Sbjct: 121 GTPVSTLEAILPDLDLVLLMSVNPGFGGQKFISSSFDKLRKLDEMRNAMNPEMILAVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
VT N + LV AGAD L+ G++FF A ++
Sbjct: 181 VTVDNAQDLVSAGADALIAGTAFFKADNPAEAAVKIKS 218
>gi|239908524|ref|YP_002955266.1| ribulose-phosphate 3-epimerase [Desulfovibrio magneticus RS-1]
gi|239798391|dbj|BAH77380.1| ribulose-phosphate 3-epimerase [Desulfovibrio magneticus RS-1]
Length = 224
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 95/222 (42%), Positives = 140/222 (63%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP + PS+L++DF+RL +E++ + AG +H DVMDG FVPNI+FG +I ++R
Sbjct: 1 MTPPFILSPSLLSSDFARLADELAALEAAGLSWVHLDVMDGQFVPNITFGPPLIAAMRKT 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMI + ++ AG D+I H E++ H+ R++ I +G VA+NP
Sbjct: 61 SRLYFDTHLMIERPERYLAEFRAAGSDLICVHAEATVHLERAVAEIARLGAAPAVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TP++ +E ++ ++DM+LIMTVNPGFGGQ I + KIR AL +R + ++VDGGV
Sbjct: 121 TPLSAVEWLLPQLDMVLIMTVNPGFGGQSFIPFCLDKIRALSALRRERGLAFRIQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
T N +L+ AGAD+LV GS+FF Y +RL+ +A
Sbjct: 181 TPDNTAALLAAGADVLVSGSAFFGHP---PYKERLDVFHAAA 219
>gi|219847256|ref|YP_002461689.1| Ribulose-phosphate 3-epimerase [Chloroflexus aggregans DSM 9485]
gi|219541515|gb|ACL23253.1| Ribulose-phosphate 3-epimerase [Chloroflexus aggregans DSM 9485]
Length = 223
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-- 62
+++ PSIL ADFSRLGE+++ + G IH DVMDG FVPNISFG V+RSLR +D
Sbjct: 1 MRLAPSILTADFSRLGEQVATACETGIDWIHLDVMDGQFVPNISFGPPVVRSLRPLADRY 60
Query: 63 -SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ D HLMI + ++ A AG D+IT H E++PH+ R+++ IH +GKK GVA+NP T
Sbjct: 61 GALLDAHLMIVEPERYLADFAAAGADLITVHVEATPHVHRAIQMIHDLGKKAGVALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P++++E+VID++++IL+MTVNPGFGGQ LI S + K+R+ ++G R + + VDGGV
Sbjct: 121 PLSMVEEVIDQVELILLMTVNPGFGGQTLIPSVLAKVRRLATMLGDRPVEIMVDGGVHPA 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + +GA + VVGS+ F ++ + L
Sbjct: 181 TIAACAASGATVAVVGSAVFGEQPIPAAIAALR 213
>gi|307111522|gb|EFN59756.1| hypothetical protein CHLNCDRAFT_48415 [Chlorella variabilis]
Length = 246
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 8/218 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PS+L+ DF RL EE + + GA +H DVMDG FVPN++ G +++SLR ++
Sbjct: 7 PPTIIAPSLLSCDFGRLAEESKRMVELGADWLHVDVMDGHFVPNLTLGPPIVQSLRRHTP 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSP----HIRRSLRTIHAMGKKTGVAIN 118
+ DCHLM++ + A AG + TFH E+ +R+ + +HA G G+ I
Sbjct: 67 AFLDCHLMVAQPARWVADFAAAGASMFTFHLEAVECGQAAVRQLIGAVHAAGMLCGLTIK 126
Query: 119 PETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
P TPV L ++ DM+LIM+V PGFGGQ ST+ K+R ++ + +EVDG
Sbjct: 127 PGTPVEQLLPYLEAGLPDMVLIMSVEPGFGGQAFQPSTMDKVRFLRSRF--PDLYIEVDG 184
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
G+ I+ AGA+ +V GS+ F + +L
Sbjct: 185 GLAPSTIQQAADAGANAIVAGSAVFGAPDPGAVICQLR 222
>gi|255536945|ref|XP_002509539.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
gi|223549438|gb|EEF50926.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
Length = 226
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 74/224 (33%), Positives = 123/224 (54%), Gaps = 6/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR +
Sbjct: 1 MGVTPKIAPSMLSSDFANLATEAERMLSCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINP 119
+ + DCHLM+++ ++ + AG TFH E+S ++ I + G + GVA+ P
Sbjct: 61 TKAYLDCHLMVTNPIDYVEPLGKAGASGFTFHVEASRDNWADLIQRIKSKGMRPGVALKP 120
Query: 120 ETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
T + + +++ ++M+L+MTV PGFGGQ+ + + + K++ + S+ +EVDG
Sbjct: 121 GTSIEEVYPLVECENPVEMVLVMTVEPGFGGQKFMPTMMEKVKTLRK--KYPSLDIEVDG 178
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G+ I AGA+ +V GSS F + + A
Sbjct: 179 GLGPSTIDLAASAGANCIVAGSSVFGAPEPAHVISLMKKSVQEA 222
>gi|314936616|ref|ZP_07843963.1| ribulose-phosphate 3-epimerase [Staphylococcus hominis subsp.
hominis C80]
gi|313655235|gb|EFS18980.1| ribulose-phosphate 3-epimerase [Staphylococcus hominis subsp.
hominis C80]
Length = 214
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 90/210 (42%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ DF L +EI + +AG +HFDVMDG FVPNIS G ++ ++RS + D
Sbjct: 4 IFPSLLSVDFLNLKQEIQLLEEAGVDGLHFDVMDGQFVPNISIGLPILDAVRSTTQLPID 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++I A G D+I+ H ES+PHI R+++ I ++ KK GV INP TPV +
Sbjct: 64 VHLMIENPENYIETFAKHGADMISVHIESTPHIHRAIQLIKSLDKKAGVVINPGTPVDRV 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
V+ +D +L+MTVNPGFGGQ I+ KI+ L + +EVDGG+ + I
Sbjct: 124 VPVLSMVDYVLVMTVNPGFGGQTFIDMCASKIKLLNDLKSSFNLNFDIEVDGGINDKTID 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ GA+L V GS FFNQ + K L
Sbjct: 184 ICAKHGANLFVTGSYFFNQDDYKTVTKILR 213
>gi|199597146|ref|ZP_03210578.1| Pentose-5-phosphate-3-epimerase [Lactobacillus rhamnosus HN001]
gi|258508660|ref|YP_003171411.1| Ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
gi|199591950|gb|EDZ00025.1| Pentose-5-phosphate-3-epimerase [Lactobacillus rhamnosus HN001]
gi|257148587|emb|CAR87560.1| Ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
gi|259649966|dbj|BAI42128.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
Length = 216
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L ++ + +AGA +H DVMDG FV N++FG V+++LR ++
Sbjct: 1 MKIAPSILSADFAHLARDVEKVEQAGADLLHVDVMDGHFVANLTFGPLVVQALRPVTNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+S + A+AG D I H E++ H+ L+ I A G + GV +NP TP++
Sbjct: 61 LEVHLMVSDPAAWAPAFAEAGADTILVHEEATDHLYGVLQHIAATGVRAGVVVNPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
LE+V+ +D +L+MTVNPGFGGQ+ + + + K+ + L R + +EVDGG+ ++
Sbjct: 121 SLEEVLPLVDQVLVMTVNPGFGGQKFLTAMVDKVARLHQLRQDRGLHFDIEVDGGINAKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K+ AG D+ V GS F + L +
Sbjct: 181 VKAAADAGTDIFVAGSYVFGASDVGAAISSLRE 213
>gi|157737106|ref|YP_001489789.1| ribulose-phosphate 3-epimerase [Arcobacter butzleri RM4018]
gi|157698960|gb|ABV67120.1| ribulose-phosphate 3-epimerase [Arcobacter butzleri RM4018]
Length = 213
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+A+F L EI I AG +H DVMDG FVPN++ G V+ + +
Sbjct: 1 MLVAPSILSANFGNLANEIKAICDAGCDLVHVDVMDGHFVPNMTIGPVVVEPVAKVASKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A I+FH ES H R ++ I + G K + +NP +
Sbjct: 61 LDIHLMVENNTFFVDLFAPCKPLYISFHIESEKHPHRLIQKIRSYGIKPAIVLNPHSRPQ 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +++++DM+L+M+VNPGFGGQ+ I S + K ++ K LI KR+ + +EVDGGV +N
Sbjct: 121 EIEYLLEDLDMVLLMSVNPGFGGQKFIPSVVEKAKELKELINKRNPNCLIEVDGGVNDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+ L AG D++V GS F Y K + LK
Sbjct: 181 IEILKNAGVDIVVAGSYVFGSDD---YEKAIKSLK 212
>gi|221194506|ref|ZP_03567563.1| ribulose-phosphate 3-epimerase [Atopobium rimae ATCC 49626]
gi|221185410|gb|EEE17800.1| ribulose-phosphate 3-epimerase [Atopobium rimae ATCC 49626]
Length = 224
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 135/213 (63%), Gaps = 4/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ I PS+L+ADF+RL E+ +I A IH+DVMDG FVPNISFG +++ + +
Sbjct: 3 NVYIAPSVLSADFTRLAHELESIKS--ADYIHYDVMDGHFVPNISFGPAIMKEAQKATQM 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+++ I + D G DI+TFH E++PH R + I + G + G+AINP TPV
Sbjct: 61 PFDVHLMVTNPAEIIPLFLDLGADIVTFHMEATPHAHRLVHLIRSAGARAGIAINPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
LED+I+++D++L+M+VNPGFGGQ+ I KIRQ K L ++ +EVDGGV++
Sbjct: 121 CFLEDIIEDVDLVLVMSVNPGFGGQKFIPGAYAKIRQVKELCKSHQVTPLIEVDGGVSAA 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N LV AGA +LV GS+ F + L
Sbjct: 181 NASELVSAGATMLVAGSAIFKADDREAAISELK 213
>gi|320580104|gb|EFW94327.1| D-ribulose-5-phosphate 3-epimerase [Pichia angusta DL-1]
Length = 233
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 124/223 (55%), Gaps = 11/223 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M I I PS+LA DF++LG E + K A +H DVMDG FVPN++ G +I SLR
Sbjct: 1 MVKPI-IAPSVLAGDFAQLGCECHRMFKCNADWVHLDVMDGHFVPNLTMGPPIISSLRKA 59
Query: 60 -------YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
FDCH+M+++ + + IADAG D TFH E++ ++ I G K
Sbjct: 60 VPRDESQPGKFFFDCHMMVANPEQWVPEIADAGGDQYTFHYEATKDPVGLVKLIKKHGMK 119
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
AI P TPV +L + + +DM L+MTV PGFGGQ + +PK+ +A +++
Sbjct: 120 AACAIKPGTPVDVLYPLAEHLDMALVMTVEPGFGGQSFMADMMPKVENLRA--KYPHLNI 177
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+VDGG+ + I + +AGA+++V G+S F + + L D
Sbjct: 178 QVDGGLGPKTIPAAAKAGANVIVAGTSVFKAEKPEDVIQLLRD 220
>gi|254243701|ref|ZP_04937023.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa 2192]
gi|126197079|gb|EAZ61142.1| ribulose-phosphate 3-epimerase [Pseudomonas aeruginosa 2192]
Length = 226
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 139/225 (61%), Gaps = 7/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE++ + AGA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQP-FAIAPSILSADFARLGEDVDKVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDII-TFHPES-SPHIRRSLRTIHAMGKKTGVAI 117
+ D HLM+S +D I +A + TFHPE+ H + I G + G+
Sbjct: 60 GVSAPIDVHLMVSPVDRIIGDFIEAWRHLTSTFHPEAFQAHRPVPCKLIRDGGCRAGLVF 119
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVD 175
NP TP+ +L+ V+D++DM+L+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+D
Sbjct: 120 NPATPLEVLKYVMDKVDMVLLMSVNPGFGGQKFIPGTLDKLREARALIDASGREIRLEID 179
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
GGV +NI+ + AGAD V GS+ FN + ++ +L ++
Sbjct: 180 GGVNVKNIREIAAAGADTFVAGSAIFNAPDYAEVIRAMHAELAQA 224
>gi|228474977|ref|ZP_04059705.1| ribulose-phosphate 3-epimerase [Staphylococcus hominis SK119]
gi|228270962|gb|EEK12350.1| ribulose-phosphate 3-epimerase [Staphylococcus hominis SK119]
Length = 214
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ DF L +EI + KAG +HFDVMDG FVPNIS G ++ ++RS + D
Sbjct: 4 IFPSLLSVDFLNLKQEIQLLEKAGVDGLHFDVMDGQFVPNISIGLPILDAVRSTTQLPID 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++I A G D+I+ H ES+PHI R+++ I ++ KK GV INP TPV +
Sbjct: 64 VHLMIENPENYIETFAKHGADMISVHIESTPHIHRAIQLIKSLDKKAGVVINPGTPVDRV 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
V+ +D +L+MTVNPGFGGQ I+ KI+ L + +EVDGG+ + I
Sbjct: 124 VPVLSMVDYVLVMTVNPGFGGQTFIDMCASKIKLLNDLKSSFNLNFDIEVDGGINDKTID 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ GA+L V GS FFNQ + K L
Sbjct: 184 ICAKHGANLFVTGSYFFNQDDYKTVTKILR 213
>gi|148245099|ref|YP_001219793.1| ribulose-phosphate 3-epimerase [Candidatus Vesicomyosocius okutanii
HA]
gi|146326926|dbj|BAF62069.1| ribulose-phosphate 3-epimerase [Candidatus Vesicomyosocius okutanii
HA]
Length = 223
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 135/217 (62%), Gaps = 3/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADFSRLGEE+ N+ K GA IHFDVMD +VPN++ G V +L+++
Sbjct: 1 MKQANFIAPSILSADFSRLGEEVDNVLKDGADIIHFDVMDNHYVPNLTIGPLVCEALKNH 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D+ I AG ITFHPE+S HI R+L I G K G+ NP
Sbjct: 61 GVSAPIDIHLMVKPVDNIIPNFIKAGASYITFHPEASEHIDRTLGMIQEGGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ +LE+V+ ++D+IL+M+VNPGFGGQ I T+ K R+ + LI R+I LE+DGG
Sbjct: 121 ATPIHVLENVMSKLDIILLMSVNPGFGGQSFIPHTLDKCREVRKLIDASGRNIRLEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ NI + +AGAD V GS+ F + +
Sbjct: 181 IKINNIHEISKAGADTFVAGSAIFKTDNYKTTIDAMR 217
>gi|254824980|ref|ZP_05229981.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|254992928|ref|ZP_05275118.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-064]
gi|255522122|ref|ZP_05389359.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-175]
gi|293594219|gb|EFG01980.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
Length = 214
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ ++ + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIKKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R + + +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDHWRRENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF +I+ K L
Sbjct: 184 KCKQAGVDVLVAGSYFFRADDKIACIKELKA 214
>gi|118093257|ref|XP_001232388.1| PREDICTED: hypothetical protein [Gallus gallus]
Length = 228
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 120/217 (55%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E S + GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLAALGAECSRMLDCGADYLHLDVMDGHFVPNITFGHPVVESLRKR 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D F+ H+M++ + + +A AG + TFH E++ ++ I G K G+AI
Sbjct: 61 LGQDPFFNMHMMVARPEQWVQPMAVAGANQYTFHLEATDGPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK++ + S+ +EVDGGV
Sbjct: 121 PGTTVEQLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVQWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ S L +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMKSADPRSVINLLRN 215
>gi|313636068|gb|EFS01957.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL S4-171]
Length = 214
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAELAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+++ +++I A AG II+ H E++PHI R ++ I G K GV +NP TP ++L
Sbjct: 64 VHLMLANPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKQAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++ ++D++L MTVNPGFGGQ I+ST+ +R K S +EVDGGV + +
Sbjct: 124 DAILGDVDLVLQMTVNPGFGGQAFIDSTLENMRYLDNWRRKNRGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF + +++ K LN
Sbjct: 184 KCKQAGVDVLVAGSYFFGAEDKVACVKGLNS 214
>gi|148655912|ref|YP_001276117.1| ribulose-phosphate 3-epimerase [Roseiflexus sp. RS-1]
gi|148568022|gb|ABQ90167.1| ribulose-5-phosphate 3-epimerase [Roseiflexus sp. RS-1]
Length = 230
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 92/220 (41%), Positives = 139/220 (63%), Gaps = 3/220 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
SI+++PSILAADF+RLGE+ + AGA +H DVMDG FVPNIS G V+ +LR D
Sbjct: 9 RSIRLMPSILAADFARLGEQAREVAAAGADGLHIDVMDGMFVPNISIGIPVVDALRRTVD 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLMI + +I+ AG IT H E+ H+ R+++ IHA+G GVA+NP TP
Sbjct: 69 LPLDCHLMIVEPERYIDAFVAAGATHITVHVEACRHLHRTIQQIHALGVTAGVALNPATP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVT 179
+ +E+++ ++D++LIM+VNPGFGGQ I + KI + + ++ + I L+VDGG++
Sbjct: 129 LTAIEEILPDLDLVLIMSVNPGFGGQTYIPGSTAKIVRLRRMLDEHGLHHIELQVDGGIS 188
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N+ + AGA +V G+ FN + + + D +S
Sbjct: 189 AANVADVAGAGATSIVAGTGVFNTRPISETIQAIRDALQS 228
>gi|295101232|emb|CBK98777.1| ribulose-5-phosphate 3-epimerase [Faecalibacterium prausnitzii
L2-6]
Length = 216
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 88/199 (44%), Positives = 123/199 (61%), Gaps = 3/199 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVF 65
+ PSIL+ADFS LG + + AGA+ +H+DVMDG FVPNISFG V++SL D+ +
Sbjct: 4 LSPSILSADFSHLGADCRMVLDAGAQMLHYDVMDGHFVPNISFGVPVLKSLHKALPDAFY 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + A AG ++ FH E I+ ++ I A G K G+ I P TPV
Sbjct: 64 DVHLMITHPQQYAEAFAKAGASLLNFHLECDDDIQETIDAIKAQGCKVGMTIKPGTPVEE 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L +D++D++L+M+V PGFGGQ+ + S + K+R KA +R + LEVDGGV +
Sbjct: 124 LGYYLDQLDLVLVMSVEPGFGGQKFMPSALDKLRWLKAEKDRRGLKFLLEVDGGVDAATA 183
Query: 184 KSLVQAGADLLVVGSSFFN 202
V AGAD+LV GS+ F
Sbjct: 184 PQCVAAGADVLVAGSAIFG 202
>gi|148272955|ref|YP_001222516.1| ribulose-phosphate 3-epimerase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830885|emb|CAN01829.1| putative ribulose-phosphate 3-epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 222
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++I PSIL+ADF+ L EI + A A +H D+MD FVPN++FG ++ L+ +
Sbjct: 2 PVRIEPSILSADFANLEREIQRL--ATADLVHVDIMDNHFVPNLTFGLPMVERLQQVTPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +D A+AG +TFH E++ R + +G + G+A+ P TPV
Sbjct: 60 PLDIHLMIDDVDRWAPGYAEAGAASVTFHAEATREPVALARRLREIGARAGIALKPGTPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+++ E D +L+MTV PGFGGQ + T+PK+R ++ + + + L+VDGG+
Sbjct: 120 DDYLELLHEFDQVLVMTVEPGFGGQSFMPETMPKLRALRSRLRESGHDVWLQVDGGIDVE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I +AGAD V GS F S +++L+++A A
Sbjct: 180 TIGRAAEAGADTFVSGSGVFRGGDPES---AISELRRAAEA 217
>gi|322708778|gb|EFZ00355.1| ribulose-phosphate 3-epimerase [Metarhizium anisopliae ARSEF 23]
Length = 251
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 92/248 (37%), Positives = 140/248 (56%), Gaps = 34/248 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF++LGEE + + GA +H D+MDG FVPNI+FGA V+ +R +
Sbjct: 1 MTPPAIIAPSILSADFAQLGEECARTMEQGADWLHVDIMDGHFVPNITFGAPVVAKIRKH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------P 97
D FDCH+MI+ + +AGCD+ FH E++
Sbjct: 61 VDKPTEGHGRGTFDCHMMIAEPKKWVKEFKNAGCDLYCFHYEAAFSTAAESPEQTSDKKT 120
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQLI 151
+ +R IHA G G+AI P+T V +L D++ ++ DM+L+MTV PGFGGQ+ +
Sbjct: 121 SPKDLIRYIHANGMLAGIAIKPDTSVDVLWDILETADPKEKPDMVLVMTVYPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
S +PK++ +A + +++EVDGG+ I AGA+++V GS+ F K +
Sbjct: 181 ASELPKVQALRAKYPE--LNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAKDPS---E 235
Query: 212 RLNDLKKS 219
++ L+KS
Sbjct: 236 VISLLRKS 243
>gi|227833014|ref|YP_002834721.1| ribulose-phosphate 3-epimerase [Corynebacterium aurimucosum ATCC
700975]
gi|262182498|ref|ZP_06041919.1| ribulose-phosphate 3-epimerase [Corynebacterium aurimucosum ATCC
700975]
gi|227454030|gb|ACP32783.1| ribulose-phosphate 3-epimerase [Corynebacterium aurimucosum ATCC
700975]
Length = 225
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 83/221 (37%), Positives = 126/221 (57%), Gaps = 7/221 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+P I PSILAADF+RLGEE+ + A A IH D+MDG FVPN+SFG D+ ++ +
Sbjct: 5 SPGPIISPSILAADFTRLGEEVEAV--ANADWIHVDIMDGHFVPNLSFGPDITATVDGIT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAIN 118
D HLMI + + A AG D I FH E+ ++ R I +G + G +I
Sbjct: 63 SQTLDVHLMIEDPEKWVETYAKAGADCIIFHVEAVADKDAAIALARKIRDLGVRAGFSIK 122
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP+ D ++ D +L+M+V PGFGGQ + + K+R +A I +R ++ +E+DG
Sbjct: 123 PGTPIEPWLDALEHFDEVLVMSVEPGFGGQSFMPDQLDKVRTLRAAIDERGLNVLIEIDG 182
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G+++ I+S +AG D V GS+ + Q + + + L L
Sbjct: 183 GISAETIRSAAEAGCDAFVAGSAIYKQADKAAAVEELRRLA 223
>gi|255632468|gb|ACU16584.1| unknown [Glycine max]
Length = 228
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 125/224 (55%), Gaps = 6/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR +
Sbjct: 1 MGMTPKIAPSMLSSDFANLASEAQRMLHFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINP 119
+ + DCHLM+++ ++ +A AG TFH E+S + ++ I + G GVA+ P
Sbjct: 61 TKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVETSKDNWKELIQRIKSHGMIPGVALKP 120
Query: 120 ETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
TPV + +++ ++M+L+MTV PGFGGQ+ + T+ K+R + S+ +EVDG
Sbjct: 121 GTPVGEVYPLVEAENPVEMVLVMTVEPGFGGQKFMAETMDKVRILRK--KYPSLDIEVDG 178
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G+ I AGA+ +V GSS F L + A
Sbjct: 179 GLGPSTIDVAASAGANCIVAGSSVFGAPEPAQVISLLRSSVEKA 222
>gi|320140963|gb|EFW32810.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 214
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ DF L E+ + +AG +HFDVMDG FVPNIS G ++ ++R +
Sbjct: 3 KLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I A+ G D+I+ H ES+PHI R+++ I + KK GV INP TP++
Sbjct: 63 DVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+E ++D +D +L+MTVNPGFGGQ I+ + KI A+ +R + +EVDGGV +
Sbjct: 123 IEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIVGLNAIKMERQLNFDIEVDGGVNTDTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K V+ GA +LV GS FF Q+ + L
Sbjct: 183 KVCVENGATMLVTGSFFFKQEDYKKVTQALK 213
>gi|57866768|ref|YP_188371.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis RP62A]
gi|242242504|ref|ZP_04796949.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis W23144]
gi|57637426|gb|AAW54214.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis RP62A]
gi|242234078|gb|EES36390.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis W23144]
gi|319401485|gb|EFV89695.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis FRI909]
Length = 214
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PS+L+ DF L EE+ + A +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 2 VKILPSLLSIDFLNLKEELQLLEAAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN+ A+ G D+I+ H E++ HI R++ I +GKK GV INP T V
Sbjct: 62 IDVHLMIEQPENYINLFAEHGADMISVHVEATTHIHRAIEQIKQLGKKAGVVINPGTSVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ ++ +D +L+MTVNPGFGGQ IE + KI Q L + + +EVDGG+ +
Sbjct: 122 TILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K V+ GA +LV GS FF Q+ L +
Sbjct: 182 SKRCVEQGATMLVTGSYFFKQEDYAKVTSLLKE 214
>gi|332638221|ref|ZP_08417084.1| ribulose-phosphate 3-epimerase [Weissella cibaria KACC 11862]
Length = 219
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 133/214 (62%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+AD+ L ++I I AGA+ +H DVMDG FVP+IS+G +++LR ++
Sbjct: 2 TIKVAPSILSADYINLQKDIELIEAAGAEFVHIDVMDGMFVPSISYGPAWVKALRPVTNM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLM+ + +I++ A+AG DII H E++PHI R+L+ I G K V INP T V
Sbjct: 62 VLDVHLMVEQPERYIDVFAEAGSDIIGVHYEATPHIHRALQQIKNHGIKAEVVINPGTSV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
A +E V+ +D +L+MTVNPGFGGQ+ + T+ KI + + ++ +E+DGG
Sbjct: 122 AAIEPVLHMVDQVLVMTVNPGFGGQKFLPETLEKIARLAEIKREKGYDFDIEIDGGANDE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K +AGA + V GS F++ + RL +
Sbjct: 182 TTKLAYEAGATVAVAGSYVFDKVDPAAKIARLKE 215
>gi|323440997|gb|EGA98704.1| ribulose-phosphate 3-epimerase [Staphylococcus aureus O11]
Length = 214
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS+L+ DF L E+ + +AG +HFDVMDG FVPNIS G ++ ++R +
Sbjct: 3 KLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + +I A+ G D+I+ H ES+PHI R+++ I + KK GV INP TP++
Sbjct: 63 DVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
+E ++D +D +L+MTVNPGFGGQ I+ + KI A+ +R + +EVDGG+ +
Sbjct: 123 IEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGLNTDTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K V+ GA +LV GS FF Q+ + L
Sbjct: 183 KVCVENGATMLVTGSFFFKQEDYKKVTQALK 213
>gi|311742369|ref|ZP_07716178.1| ribulose-phosphate 3-epimerase [Aeromicrobium marinum DSM 15272]
gi|311313997|gb|EFQ83905.1| ribulose-phosphate 3-epimerase [Aeromicrobium marinum DSM 15272]
Length = 221
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS+L ADF+ L +E + I GA +H DVMD FVPN++ GA VI SL
Sbjct: 2 AVRITPSVLNADFAHLADECARI--PGADWLHLDVMDNHFVPNLTLGAPVIESLAKVVAQ 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ D +AG +TFH E++ R R I A G + +A+ P TP+
Sbjct: 60 PIDAHLMIADPDRWAPGFVEAGARSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
D++ E+DM+LIMTV PGFGGQ ++ +PKIR+A+ L+ + + L+VDGGV+
Sbjct: 120 EPYADLLPELDMVLIMTVEPGFGGQSFLDLCLPKIRRARELLDRVGGDVWLQVDGGVSLG 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ AGAD V GS+ F + L + +A
Sbjct: 180 TIERCADAGADTFVAGSAVFGADDPEQMVQALRERAVAA 218
>gi|332529257|ref|ZP_08405220.1| ribulose-phosphate 3-epimerase [Hylemonella gracilis ATCC 19624]
gi|332041267|gb|EGI77630.1| ribulose-phosphate 3-epimerase [Hylemonella gracilis ATCC 19624]
Length = 235
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 147/225 (65%), Gaps = 11/225 (4%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-- 60
P+ +I PSIL+ADF+RLG+E+ N+ AGA IHFDVMD +VPN++FG + ++L+ +
Sbjct: 12 PAYRIAPSILSADFARLGDELKNVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPHAK 71
Query: 61 ----SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
+ D H+M+ +D+ A++G D+I+FHP++SPH+ RS++ I A G K G+
Sbjct: 72 RADGTPVPLDVHMMVQPVDALAAAFAESGADLISFHPDASPHVHRSIQAIKAKGVKAGLT 131
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEV 174
NP P+ +L+ VI++ID+ILIM+VNPGFGGQ I+S + KI A+ I + I LEV
Sbjct: 132 FNPAAPLDVLDWVIEDIDLILIMSVNPGFGGQSFIDSALRKIEAARKRIEACGKDIRLEV 191
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
DGG+ NI+ + AGAD V GS+ F + Y ++ ++++
Sbjct: 192 DGGIKVDNIRRVADAGADTFVAGSAIFGKPD---YKAVVDAMRRA 233
>gi|46908838|ref|YP_015227.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47092281|ref|ZP_00230072.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|226225210|ref|YP_002759317.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes Clip81459]
gi|254852041|ref|ZP_05241389.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|254931072|ref|ZP_05264431.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|300763584|ref|ZP_07073582.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|46882111|gb|AAT05404.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47019260|gb|EAL10002.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|225877672|emb|CAS06386.1| Putative ribulose-phosphate 3-epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605338|gb|EEW17946.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|293582616|gb|EFF94648.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|300515861|gb|EFK42910.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|328469673|gb|EGF40598.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 220]
gi|332313089|gb|EGJ26184.1| Ribulose-phosphate 3-epimerase [Listeria monocytogenes str. Scott
A]
Length = 214
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ ++ + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEHAGADYLHIDVMDGHFVPNLTFGIDMVEQIKKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R + + +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDHWRRENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF +I+ K L
Sbjct: 184 KCKQAGVDVLVAGSYFFRADDKIACIKELKA 214
>gi|224004198|ref|XP_002295750.1| ribulose-phosphate 3-epimerase, phosphoribulose epimerase,
erythrose-4-phosphate isomerase, phosphoketopentose
3-epimerase, xylulose phosphate 3-epimerase,
phosphoketopentose epimerase, ribulose 5-phosphate
3-epimerase, D-ribulose phosphate-3-epimerase,
D-ribulose 5-phosphate epimerase, D-ribulose-5-P
3-epimerase, D-xylulose-5-phosphate 3-epimerase,
pentose-5-phosphate 3-epimerase [Thalassiosira
pseudonana CCMP1335]
gi|209585782|gb|ACI64467.1| ribulose-phosphate 3-epimerase, phosphoribulose epimerase,
erythrose-4-phosphate isomerase, phosphoketopentose
3-epimerase, xylulose phosphate 3-epimerase,
phosphoketopentose epimerase, ribulose 5-phosphate
3-epimerase, D-ribulose phosphate-3-epimerase,
D-ribulose 5-phosphate epimerase, D-ribulose-5-P
3-epimerase, D-xylulose-5-phosphate 3-epimerase,
pentose-5-phosphate 3-epimerase [Thalassiosira
pseudonana CCMP1335]
Length = 233
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 97/225 (43%), Positives = 141/225 (62%), Gaps = 4/225 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PSIL+ADF+RLGEE+ N+ KAGA IHFDVMD +VPN++ G V ++LR +
Sbjct: 7 KYIIAPSILSADFARLGEEVENVLKAGADVIHFDVMDNHYVPNLTIGPMVCKALRDHGIT 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+S +DS I AG ITFHPE++ HI RSL+ I G K G+ NP TP
Sbjct: 67 APIDVHLMVSPVDSLITDFIAAGASHITFHPEATNHIDRSLQLIKNGGCKAGLVFNPATP 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + V+D++D+IL+M+VNPGFGGQ I +T+ K R+A+ +I + I L +DGGV
Sbjct: 127 LDAAKYVMDKLDIILLMSVNPGFGGQAFIPATLDKAREARKMIDEAGIDCRLMIDGGVKI 186
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEIS-YAKRLNDLKKSALAID 224
NI+ + +AG D++V GS+ F + Y ++ ++ +
Sbjct: 187 DNIREVAEAGVDMMVAGSAIFKNPRTVDSYKSTIDAMRAEIEKAE 231
>gi|239816003|ref|YP_002944913.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus S110]
gi|239802580|gb|ACS19647.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus S110]
Length = 234
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 147/220 (66%), Gaps = 5/220 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS+L+A+F+RLGEE++ + +AGA IHFDVMD +VPN++ G V +++ Y+
Sbjct: 7 AMRIAPSLLSANFARLGEEVTAVVEAGADLIHFDVMDNHYVPNLTIGPLVCEAIKPYATV 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D+ I + A AG II+FHPE+S HI R++R I G K G+ +NP TP+
Sbjct: 67 PIDVHLMVKPVDALIPMFAQAGASIISFHPEASEHIDRTIRLIRDSGCKAGLVLNPATPL 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
A+L+ V+D++D++L+M+VNPGFGGQ IES +PKI + I R I LEVDGGV
Sbjct: 127 AVLDHVLDQLDLVLLMSVNPGFGGQSFIESVLPKIEAVRRRIDASGREIWLEVDGGVKPD 186
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
N + AGAD LV GS+ FN Y + + ++ +AL
Sbjct: 187 NAARIGAAGADTLVAGSAVFNGG---RYREAIGAIRAAAL 223
>gi|223043805|ref|ZP_03613848.1| ribulose-phosphate 3-epimerase [Staphylococcus capitis SK14]
gi|222442902|gb|EEE49004.1| ribulose-phosphate 3-epimerase [Staphylococcus capitis SK14]
Length = 214
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 135/215 (62%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++++PS+L+ DF L EE+ + KA +HFDVMDG FVPNIS G ++ ++RSYS+
Sbjct: 2 VKVLPSLLSVDFLNLKEELDRLEKANVDGLHFDVMDGKFVPNISIGIPLLDAVRSYSNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I + AD G D+I+ H E++PHI R++ I + KK GV INP TPV
Sbjct: 62 IDVHLMIEQPENYIQLFADHGADMISVHVEATPHIHRAIEEIKLLNKKAGVVINPGTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ IE I KI Q + + ++ +EVDGG+
Sbjct: 122 SILLVLSIVDYVLVMTVNPGFGGQSFIEQCINKIEQLNQIKHENNLTFDIEVDGGINDST 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K V+ GA +LV GS FF Q YAK N LK
Sbjct: 182 SKYCVEQGATMLVTGSYFFKQND---YAKVTNALK 213
>gi|73666682|ref|YP_302698.1| ribulose-5-phosphate 3-epimerase [Ehrlichia canis str. Jake]
gi|72393823|gb|AAZ68100.1| ribulose-5-phosphate 3-epimerase [Ehrlichia canis str. Jake]
Length = 222
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 138/214 (64%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SIL+ADF+ L + I + A IH DVMDG FVPNI+ G V+ ++R +
Sbjct: 8 VEVSSSILSADFANLSKSIEVLENASVDYIHIDVMDGNFVPNITIGPVVVSAIRECTKIP 67
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI+S ++I +AG D+IT H ES H+ R ++ I + GK G+++ P + +
Sbjct: 68 FDVHLMINSPSNYIETFVNAGADMITVHAESEVHLDRVIKKIKSYGKDAGLSLVPTSHYS 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
ILE +I E+D++LIMTVNPGF GQQ I S + KI + +++I K S+ + VDGGV N
Sbjct: 128 ILEYIIFELDLVLIMTVNPGFSGQQFIVSQLDKISRVRSMIEKYSLKTKIAVDGGVNIDN 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
KS+++AGAD+LVVGS+ F K + Y ++L
Sbjct: 188 AKSVIEAGADILVVGSAIFKAKNVLDYVQKLKSF 221
>gi|312869934|ref|ZP_07730073.1| ribulose-phosphate 3-epimerase [Lactobacillus oris PB013-T2-3]
gi|311094519|gb|EFQ52824.1| ribulose-phosphate 3-epimerase [Lactobacillus oris PB013-T2-3]
Length = 217
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 136/217 (62%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + +AGA+ +H DVMDG FVP+IS+G ++++R ++
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVEQAGAEYLHIDVMDGTFVPSISYGPGFVKAIRPVTNMT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 62 LDVHLMVQSPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ +EVDGGV +
Sbjct: 122 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKQEKGYDFDIEVDGGVNDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K QAGA + V GS FN A+R+ L+ +
Sbjct: 182 VKDCYQAGATVAVAGSYVFNADDP---AERIEALRNA 215
>gi|296269349|ref|YP_003651981.1| ribulose-phosphate 3-epimerase [Thermobispora bispora DSM 43833]
gi|296092136|gb|ADG88088.1| ribulose-phosphate 3-epimerase [Thermobispora bispora DSM 43833]
Length = 219
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 133/219 (60%), Gaps = 3/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++QI PSIL+ADF+RL EE + + A +H DVMD FVPN++ G V+ +L +
Sbjct: 2 AVQIAPSILSADFARLAEEAARVE-GVADWLHVDVMDNHFVPNLTIGLPVVEALLRSTSI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+AG +T H E++ + R+LR I A G + G+A+NP TPV
Sbjct: 61 PLDCHLMIEDPDRWAPGYAEAGAASVTIHAEAAKAVIRTLRAIRAAGARAGLALNPATPV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
ED++ EIDM+L+MTV PGFGGQ+ ++ +PK+ +A+ALI K + L+VDGGV+
Sbjct: 121 EAYEDLLPEIDMLLVMTVEPGFGGQRFLDIMLPKVARARALIDKHGGEVWLQVDGGVSEE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ AGAD+ V GS+ + + L L + A
Sbjct: 181 TIERCAAAGADVFVAGSAVYGSSDPAKAVRHLRALAERA 219
>gi|86750799|ref|YP_487295.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris HaA2]
gi|86573827|gb|ABD08384.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris HaA2]
Length = 232
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 108/218 (49%), Positives = 148/218 (67%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFSRLGEE+ + +AGA IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 7 RPLVIAPSILASDFSRLGEEVRAVDQAGADWIHLDVMDGHFVPNISYGPDVIKAMRPHTT 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP
Sbjct: 67 KIFDAHLMIAPCDPYLEAFAKAGCDHITIHAEAGPHLHRSLQAIRALGKKAGVSLNPSTP 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ LE VID ID++L+M+VNPGFGGQ I S I KI+ +A+ R I +EVDGGV+ +
Sbjct: 127 ASALEYVIDMIDLVLVMSVNPGFGGQAFIPSAINKIQDIRAMTAGRPIDIEVDGGVSDKV 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ AGA+ V GS+ F SY ++ ++ +A
Sbjct: 187 SGQIAAAGANAFVAGSAVFKGGTVESYKANIDAIRNAA 224
>gi|269123960|ref|YP_003306537.1| ribulose-phosphate 3-epimerase [Streptobacillus moniliformis DSM
12112]
gi|268315286|gb|ACZ01660.1| ribulose-phosphate 3-epimerase [Streptobacillus moniliformis DSM
12112]
Length = 211
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 143/216 (66%), Gaps = 6/216 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+LAADFS L EE+ I + AK +H D+MDG FVPNISFGADVI+++R Y
Sbjct: 1 MNKEIIIAPSLLAADFSNLKEEVIKIGETKAKWLHLDIMDGNFVPNISFGADVIKAIRPY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLM+ + +I +A AG + IT H E++ H+ R+L+ I + G K GV+INP
Sbjct: 61 SQLHFDAHLMVEKPEWYIETVAKAGVNSITIHAEATKHLHRALQLIKSHGVKAGVSINPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + L+++I+E+D+IL+MTVNPGFGGQ+ I++ K+++ + I ++VDGG+
Sbjct: 121 TDIGFLDNIIEELDLILVMTVNPGFGGQKFIDAMCQKVKRIREKF--PHIDIQVDGGIND 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + +AGA++LV GS F+ Y +++N L
Sbjct: 179 KTCLLVKEAGANILVAGSYVFSG----DYNEKVNSL 210
>gi|229552466|ref|ZP_04441191.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus LMS2-1]
gi|258539837|ref|YP_003174336.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus Lc 705]
gi|229314203|gb|EEN80176.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus LMS2-1]
gi|257151513|emb|CAR90485.1| Ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus Lc 705]
Length = 216
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L ++ + +AGA +H DVMDG FV N++FG V+++LR ++
Sbjct: 1 MKIAPSILSADFAHLARDVEKVEQAGADLLHVDVMDGHFVANLTFGPLVVQALRPVTNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+S + A+AG D I H E++ H+ L+ I A G + GV +NP TP++
Sbjct: 61 LEVHLMVSDPAAWAPAFAEAGADTILVHEEATDHLYGVLQHIAATGVRAGVVVNPGTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
LE+V+ +D +L+MTVNPGFGGQ+ + + + K+ + L R + +EVDGG+ ++
Sbjct: 121 SLEEVLPLVDQVLVMTVNPGFGGQKFLTAMVDKVARLHQLRQDRGLHFDIEVDGGINAKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K+ AG D+ V GS F+ + L +
Sbjct: 181 VKAAADAGTDIFVAGSYVFSASDVGAAISSLRE 213
>gi|148925830|ref|ZP_01809517.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844816|gb|EDK21920.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|307747383|gb|ADN90653.1| Ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
M1]
Length = 217
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 3 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ I+FH ES H R I + G + +NP TP+
Sbjct: 63 LDVHLMVKDVSKFIDLFIPLKPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPID 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ +EVDGGV N
Sbjct: 123 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L ++GAD+LV GS F+ + L
Sbjct: 183 ASDLEESGADILVAGSYIFSSNDYKTAISSLK 214
>gi|258645361|ref|ZP_05732830.1| ribulose-phosphate 3-epimerase [Dialister invisus DSM 15470]
gi|260402710|gb|EEW96257.1| ribulose-phosphate 3-epimerase [Dialister invisus DSM 15470]
Length = 213
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+LAADFS L E+ +I GA +H DVMDG FVPNISFG VI+SLR +
Sbjct: 1 MKIAPSVLAADFSNLECELKDIETGGADLVHLDVMDGTFVPNISFGPPVIQSLRKVTLLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM + + + + G D+I+FH E+ H+ R++ I + G K G+A+NP T ++
Sbjct: 61 FDVHLMTYHPEYYFDSLGKIGVDMISFHQEAVIHVDRTIHDIKSRGIKAGIALNPGTSLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
LE V+ +D +LIM+VNPGFGGQ+ I T+ KI+ K ++ + I +EVDGGV+S N
Sbjct: 121 ALELVLPLLDFVLIMSVNPGFGGQKFISYTLDKIKVLKKMMKNLNLQIPIEVDGGVSSAN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
L GAD+LV GSS F L
Sbjct: 181 AVLLKDVGADILVAGSSVFGAADRKKAIDVLRS 213
>gi|124267971|ref|YP_001021975.1| ribulose-5-phosphate 3-epimerase [Methylibium petroleiphilum PM1]
gi|124260746|gb|ABM95740.1| ribulose-5-phosphate 3-epimerase [Methylibium petroleiphilum PM1]
Length = 234
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 152/221 (68%), Gaps = 5/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I+I PS+L+ADF+RLG+E+ ++ +AGA IHFDVMD +VPN++ G V ++++ ++
Sbjct: 1 MSAIRIAPSLLSADFARLGDEVRSVIEAGADLIHFDVMDNHYVPNLTIGPLVCQAIKPHA 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ +D+ I + A AG DII+FHPE+S H+ R+++ I + G K G+ +NP T
Sbjct: 61 TVPIDVHLMVKPVDALIPMFAQAGADIISFHPEASEHVDRTIQLIRSHGIKAGLVLNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+ +L+ V+D++D++L+M+VNPGFGGQ IE T+PKI + LI + R + LEVDGGV
Sbjct: 121 PLNVLDHVLDQLDLVLLMSVNPGFGGQSFIEGTLPKIEAVRRLIDRSGRDVWLEVDGGVK 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N + + AGAD LV GS+ FN SYA + ++ +A
Sbjct: 181 VDNAQRVGAAGADTLVAGSAVFNS---ASYAHAIAGIRDNA 218
>gi|296205469|ref|XP_002749784.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 2
[Callithrix jacchus]
Length = 246
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 82/235 (34%), Positives = 121/235 (51%), Gaps = 22/235 (9%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK------- 111
D FD H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKSCSFAQ 120
Query: 112 -----------KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
+ G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 121 AKVQWPSQGPLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 180
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ S+ +EVDGGV + +AGA+++V GS+ + S L +
Sbjct: 181 LRTQF--PSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 233
>gi|153954002|ref|YP_001394767.1| ribulose-phosphate 3-epimerase [Clostridium kluyveri DSM 555]
gi|219854616|ref|YP_002471738.1| hypothetical protein CKR_1273 [Clostridium kluyveri NBRC 12016]
gi|146346883|gb|EDK33419.1| Pentose phosphate epimerase [Clostridium kluyveri DSM 555]
gi|219568340|dbj|BAH06324.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 216
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K +H DVMDG FVPNISFG +I+S+R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKSLDKCKVDLVHIDVMDGSFVPNISFGIPIIKSIRHLTKIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ DAG DIIT H E+ H+ R++ I ++G K VA+NP T V
Sbjct: 62 FDVHLMIEEPARYVKDFVDAGADIITVHFEADRHLDRTVDYIKSLGVKASVALNPATLVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +I ++DMILIM+VNPGFGGQ+ IE KI+ K L K + + +EVDGG+T N
Sbjct: 122 NVKYLIPKLDMILIMSVNPGFGGQKYIEYCDSKIKYVKELADKYNKDLMIEVDGGITKDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +V+ GA+++V GSS F + + L +
Sbjct: 182 IARVVRKGANVIVAGSSVFRGETIEDNIRILRE 214
>gi|27467815|ref|NP_764452.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis ATCC
12228]
gi|251810652|ref|ZP_04825125.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876346|ref|ZP_06285213.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis SK135]
gi|293366813|ref|ZP_06613489.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|27315359|gb|AAO04494.1|AE016746_284 ribulose-phosphate 3-epimerase [Staphylococcus epidermidis ATCC
12228]
gi|251805812|gb|EES58469.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295371|gb|EFA87898.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis SK135]
gi|291319114|gb|EFE59484.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329729963|gb|EGG66354.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis VCU144]
gi|329736296|gb|EGG72568.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis VCU028]
Length = 214
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PS+L+ DF L EE+ + A +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 2 VKILPSLLSIDFLNLKEELQLLETAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN+ A+ G D+I+ H ES+ HI R++ I +GKK GV INP T V
Sbjct: 62 IDVHLMIEQPENYINLFAEHGADMISVHVESTTHIHRAIEQIKQLGKKAGVVINPGTSVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ ++ +D +L+MTVNPGFGGQ IE + KI Q L + + +EVDGG+ +
Sbjct: 122 TILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K V+ GA +LV GS FF Q+ L +
Sbjct: 182 SKRCVEQGATMLVTGSYFFKQEDYAKVTSLLKE 214
>gi|315453853|ref|YP_004074123.1| ribulose-phosphate 3-epimerase [Helicobacter felis ATCC 49179]
gi|315132905|emb|CBY83533.1| ribulose-phosphate 3-epimerase [Helicobacter felis ATCC 49179]
Length = 211
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PS+L+ADF RL E + + + A H DVMDG FVPN++FG V+++L+ Y ++
Sbjct: 1 MQIAPSLLSADFMRLQESLHPLQQ--ADFFHIDVMDGHFVPNLTFGPCVLKNLKQYYNTP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ D IT H E++PH+ RS+ I ++G K G+++NP T +
Sbjct: 59 LDVHLMVENPLFFIDLYKDLQPAFITLHIENTPHLHRSVHYIKSLGIKAGLSLNPATSLE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ +I ++D++L+M+VNPGFGGQ+ + + K++ K LEVDGG+ +N
Sbjct: 119 GLDYIIQDLDLVLLMSVNPGFGGQKFLPLVLDKLQAFKKRFPNYQGVLEVDGGINLQNAS 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L GA+LLVVGS FN + + L +
Sbjct: 179 LLASCGANLLVVGSYLFNHQDPKNALLELQAI 210
>gi|291547140|emb|CBL20248.1| ribulose-phosphate 3-epimerase [Ruminococcus sp. SR1/5]
Length = 224
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/220 (39%), Positives = 141/220 (64%), Gaps = 5/220 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PSIL+ADF+RLGE+I + K G + +H DVMDG FVP+ISFG VI+S+R S+
Sbjct: 2 EYRLCPSILSADFNRLGEQIKILEKEGVEYLHIDVMDGDFVPSISFGMPVIKSIRKESNM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM++ + +I + G D IT H E+ + R+L I A G K V+I P TPV
Sbjct: 62 FFDVHLMVTEPERYIRDFVECGADSITVHAEACEDLERTLEQIRAAGVKAAVSIKPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+ +++++DM+LIMTV PGFGGQ+ ++ KI++ + LI + + ++VDGG+
Sbjct: 122 NDISHLLEDVDMVLIMTVQPGFGGQKYMDECTEKIQELRELIDEEELDVDIQVDGGINDD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISY---AKRLNDLKK 218
++++++AGA+L+V GS F + ++++++KK
Sbjct: 182 TLETVMRAGANLMVAGSWVFKGDVAANVRHITEKIHNIKK 221
>gi|85060283|ref|YP_455985.1| ribulose-phosphate 3-epimerase [Sodalis glossinidius str.
'morsitans']
gi|84780803|dbj|BAE75580.1| ribulose-phosphate 3-epimerase [Sodalis glossinidius str.
'morsitans']
Length = 226
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 146/221 (66%), Gaps = 6/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ADF+RLG + + + AGA +HFDVMD +VPN++ G V+++LR+Y
Sbjct: 1 MKNYLIAPSILSADFARLGGDTARVLAAGADVVHFDVMDNHYVPNLTMGPMVLKALRNYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A AG ITFHPE+S H+ RSL+ I G K G+ NP
Sbjct: 61 ITAPIDVHLMVKPVDRLIPDFAAAGASYITFHPEASQHVDRSLQLIKEHGCKAGLVFNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP++ LE V+D++D+IL+M+VNPGFGGQ + ST+ K+RQA+ +I + R I LEVDGGV
Sbjct: 121 TPLSCLEYVMDKLDVILLMSVNPGFGGQSFLPSTLDKLRQARQIIDRSGRDIRLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI ++ AGAD+ V GS+ F+Q Y ++ ++++
Sbjct: 181 KVDNIGAIAAAGADMFVAGSAIFSQPD---YRPVIDAMRQA 218
>gi|225452134|ref|XP_002263010.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 222
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 125/224 (55%), Gaps = 7/224 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR +
Sbjct: 1 MAPA-KIAPSMLSSDFANLASEAQRMLSFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINP 119
+++ DCHLM+++ ++ + AG TFH E S + + + I + G + GVA+ P
Sbjct: 60 TNAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEVSKENWQELVERIRSKGMRPGVALKP 119
Query: 120 ETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
TP+ + +++ ++M+L+MTV PGFGGQ+ + + K+R + S+ +EVDG
Sbjct: 120 GTPIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPEMMDKVRALRK--KYPSLDIEVDG 177
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G+ I AGA+ +V GSS F L + A
Sbjct: 178 GLGPSTIDMAASAGANCIVAGSSVFGAPKPEQVISLLRKSVEEA 221
>gi|170782378|ref|YP_001710711.1| ribulose-phosphate 3-epimerase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169156947|emb|CAQ02116.1| ribulose-phosphate 3-epimerase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 222
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 124/221 (56%), Gaps = 7/221 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++I PSIL+ADF+ L EI + A A +H D+MD FVPN++FG +++ L+ +
Sbjct: 2 PVRIEPSILSADFANLEREIQRL--ATADLVHVDIMDNHFVPNLTFGLPMVQRLQQVTPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +D A+AG +TFH E++ R + +G + G+A+ P TPV
Sbjct: 60 PLDIHLMIDDVDRWAPGYAEAGAASVTFHAEATREPVALARRLREIGARAGIALKPGTPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+++ E D +L+MTV PGFGGQ + T+PK+R ++ + + + L+VDGG+
Sbjct: 120 DDYLELLHEFDQVLVMTVEPGFGGQSFMPETMPKLRALRSRLRESGHDVWLQVDGGIDVE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I +AGAD V GS F + + +L+++A A
Sbjct: 180 TIGRAAEAGADTFVSGSGVFRGGDPEA---AIAELRRAAEA 217
>gi|89899343|ref|YP_521814.1| ribulose-phosphate 3-epimerase [Rhodoferax ferrireducens T118]
gi|89344080|gb|ABD68283.1| ribulose-5-phosphate 3-epimerase [Rhodoferax ferrireducens T118]
Length = 238
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 140/219 (63%), Gaps = 8/219 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+S++ AG IHFDVMD +VPN++FG + +L+ ++ +
Sbjct: 13 TYRIAPSILSADFARLGEELSHVIAAGCDWIHFDVMDNHYVPNLTFGPMICGALKPHAKT 72
Query: 64 ------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D HLM+ +D+ + ADAG D+I+FHP++S H+ RS++ I A G K G+
Sbjct: 73 AGGVAVPIDVHLMVQPVDALASAFADAGADLISFHPDASGHVHRSIQAIKAKGCKAGLVF 132
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVD 175
NP P+ +L+ VID+ID+ILIM+VNPGFGGQ I+S + KI + I + I LEVD
Sbjct: 133 NPAEPLDVLDWVIDDIDLILIMSVNPGFGGQSFIDSALRKIEDVRRRITACGKDIRLEVD 192
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
GGV NI+ + AGAD V GS+ F Q S +
Sbjct: 193 GGVKVDNIRRVADAGADTFVAGSAIFGQPDYKSVVDAMR 231
>gi|312885680|ref|ZP_07745315.1| ribulose-phosphate 3-epimerase [Mucilaginibacter paludis DSM 18603]
gi|311301887|gb|EFQ78921.1| ribulose-phosphate 3-epimerase [Mucilaginibacter paludis DSM 18603]
Length = 228
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL A+F+ L ++I + ++ A IH DVMDG FVPNISFG VI++++ ++ D
Sbjct: 16 ISPSILTANFANLQKDIDMLNQSQADWIHVDVMDGVFVPNISFGFAVIKAIKQFAQKPLD 75
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ +AG D IT H E+ H+ R++ I +G + GVA+NP TPVA+L
Sbjct: 76 VHLMIVDPDRYLEEFKNAGADGITVHYEACTHLNRTINKIKELGCRAGVALNPHTPVALL 135
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+D+I ++D++LIM+VNPGFG Q+ + +T KI K L R+ + +E+DGGV + N
Sbjct: 136 DDIIADLDLVLIMSVNPGFGAQKFLSNTYKKIADLKKLCALRNPELYIEIDGGVDAGNAA 195
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+ GA++LV G++ F+ + L +
Sbjct: 196 QLINTGANVLVAGNAVFSANDPSAAVATLKSI 227
>gi|224541742|ref|ZP_03682281.1| hypothetical protein CATMIT_00914 [Catenibacterium mitsuokai DSM
15897]
gi|224525346|gb|EEF94451.1| hypothetical protein CATMIT_00914 [Catenibacterium mitsuokai DSM
15897]
Length = 214
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF+ L E+I I G IH+DVMDG FVPNISFG ++ ++R+ +D
Sbjct: 2 VKIAPSVLSADFAHLKEDIDTIYDGGKSWIHYDVMDGHFVPNISFGYSILSNVRAVTDLF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRR---SLRTIHAMGKKTGVAINPET 121
D HLMI+ +++ +AG D+ITFH E+ ++ ++ IH G ++I P T
Sbjct: 62 IDVHLMITDPGQYLDEFINAGADLITFHIEAVSSVQEARVLIQRIHDAGCLASISIKPGT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V ++ +D++DM+L+M+V PGFGGQ S + KI + K + R +EVDGG+
Sbjct: 122 DVEAVKPFLDDLDMVLVMSVEPGFGGQSFNPSALDKITELKEIRNDRRYLIEVDGGINEN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
AGAD+LV GS F + L
Sbjct: 182 TANLCRGAGADVLVAGSYVFKAENRQEAIDSLK 214
>gi|39974639|ref|XP_368710.1| hypothetical protein MGG_00534 [Magnaporthe oryzae 70-15]
gi|145018567|gb|EDK02846.1| hypothetical protein MGG_00534 [Magnaporthe oryzae 70-15]
Length = 251
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 89/244 (36%), Positives = 126/244 (51%), Gaps = 31/244 (12%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LGEE S GA +H D+MDG FVPNI+FG V+ +R +
Sbjct: 1 MAPQAIIAPSILSADFGNLGEECSKTIGQGADWLHVDIMDGHFVPNITFGPPVVAKIRGH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------P 97
D FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VDRPEAAHGKGTFDCHMMIAEPKKWVKEFKAAGCDLYCFHYEAAFSSAAEEPSATSDAKT 120
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVID------EIDMILIMTVNPGFGGQQLI 151
R +R IH G G+AI P TP +L +++D DM+L+MTV PGFGGQ+ +
Sbjct: 121 SPRELIRYIHDQGLLAGIAIKPATPADVLYELLDSSDAAERPDMVLVMTVEPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
S +PK++ + + +++EVDGG+ I AGA+++V GS+ F K K
Sbjct: 181 ASELPKVQALRQRYPE--LNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAKDPAEVIK 238
Query: 212 RLND 215
L +
Sbjct: 239 VLRE 242
>gi|294638082|ref|ZP_06716341.1| ribulose-phosphate 3-epimerase [Edwardsiella tarda ATCC 23685]
gi|291088790|gb|EFE21351.1| ribulose-phosphate 3-epimerase [Edwardsiella tarda ATCC 23685]
Length = 225
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 145/221 (65%), Gaps = 7/221 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MNPYL-IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A+AG IITFHPE+S HI R+L+ I + G K G+ +NP
Sbjct: 60 GISAPIDVHLMVKPVDRIIPDFAEAGASIITFHPEASEHIDRTLQLIRSCGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D +D IL+M+VNPGFGGQ I +T+ K+RQ + I + + EVDGG
Sbjct: 120 ATPLSCLDYVMDRLDTILLMSVNPGFGGQSFIPATLDKLRQVRERIDASGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V NI ++ AGAD+ V GS+ F+Q YA+ + +++
Sbjct: 180 VKVDNIGAIAAAGADMFVAGSAIFSQPD---YAQVIAAMRQ 217
>gi|164428399|ref|XP_963721.2| ribulose-phosphate 3-epimerase [Neurospora crassa OR74A]
gi|157072132|gb|EAA34485.2| ribulose-phosphate 3-epimerase [Neurospora crassa OR74A]
Length = 251
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 126/244 (51%), Gaps = 31/244 (12%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG + S GA +H D+MDG FVPN+++G ++ +R +
Sbjct: 1 MAPKAIIAPSILSADFANLGHDCSKTISQGADWLHVDIMDGHFVPNLTWGPPIVAKIRGH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------P 97
+ FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VEKPTEAYGKGTFDCHMMIAEPKKWVKEFKKAGCDLYCFHYEAAFSTAAESPEAKSDKKT 120
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQLI 151
+ ++ IH G G+A+ P T V +L +++ + DM+LIMTV PGFGGQ+ +
Sbjct: 121 SPKELIKYIHDQGMLAGIALKPATSVDVLWEILESEDPKERPDMVLIMTVEPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
S +PK+++ + + +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 ASELPKVQELRKRYPE--LNIEVDGGLGPSTIDQAADAGANVIVAGSAVFGAQDPSEVIA 238
Query: 212 RLND 215
L +
Sbjct: 239 LLRE 242
>gi|46906750|ref|YP_013139.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47093129|ref|ZP_00230905.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|217965409|ref|YP_002351087.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|226223130|ref|YP_002757237.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes Clip81459]
gi|254824221|ref|ZP_05229222.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|254853874|ref|ZP_05243222.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|254933259|ref|ZP_05266618.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|254992419|ref|ZP_05274609.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J2-064]
gi|290894376|ref|ZP_06557340.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|300765156|ref|ZP_07075142.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|46880015|gb|AAT03316.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47018502|gb|EAL09259.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 4b
H7858]
gi|217334679|gb|ACK40473.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|225875592|emb|CAS04295.1| Putative ribulose-5-phosphate 3-epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258607259|gb|EEW19867.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|290556083|gb|EFD89633.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|293584819|gb|EFF96851.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|293593454|gb|EFG01215.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|300514127|gb|EFK41188.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|307570035|emb|CAR83214.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes L99]
gi|328467574|gb|EGF38636.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 1816]
gi|332310927|gb|EGJ24022.1| Ribulose-phosphate 3-epimerase [Listeria monocytogenes str. Scott
A]
Length = 216
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 135/217 (62%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F E L L K L
Sbjct: 183 CTLAGADLIVVGSYLF----EGDIEANLEKLSKGVLT 215
>gi|289621478|emb|CBI52261.1| unnamed protein product [Sordaria macrospora]
Length = 251
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 31/244 (12%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG + S GA +H D+MDG FVPN+++G ++ +R +
Sbjct: 1 MAPKAIIAPSILSADFANLGHDCSKTIGQGADWLHVDIMDGHFVPNLTWGPPIVAKIRGH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------P 97
+ FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VEKPTEGFGKGTFDCHMMIAEPKKWVKEFKKAGCDLYCFHYEAAFSSAAESPEAKSDEKT 120
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQLI 151
+ + +R IH G G+A+ P T V +L +++ + DM+LIMTV PGFGGQ+ +
Sbjct: 121 NPKELIRYIHDQGMLAGIALKPATSVDVLWEILESEDPKERPDMVLIMTVEPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
S +PK+ + + + +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 ASELPKVAELRKRYPE--LNIEVDGGLGPATIDQAADAGANVIVAGSAVFGAQDPSEVIA 238
Query: 212 RLND 215
L +
Sbjct: 239 LLRE 242
>gi|313624958|gb|EFR94861.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL J1-023]
Length = 216
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 136/217 (62%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F E + L L K L
Sbjct: 183 CTLAGADLIVVGSYLF----EGNIEANLEKLSKGVLT 215
>gi|290891845|ref|ZP_06554842.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|290558439|gb|EFD91956.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
Length = 214
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ ++ + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIKKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R + + +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDNWRRENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF +++ + L
Sbjct: 184 KCKQAGVDVLVAGSYFFGATDKVACIQGLKK 214
>gi|119025811|ref|YP_909656.1| ribulose-phosphate 3-epimerase [Bifidobacterium adolescentis ATCC
15703]
gi|118765395|dbj|BAF39574.1| ribulose-phosphate 3-epimerase [Bifidobacterium adolescentis ATCC
15703]
Length = 224
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +
Sbjct: 3 TMTIQIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVARICQVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 61 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 121 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMTKVRRLRDEITRRGLKTKIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + + ++A
Sbjct: 181 PKTAHIVAEAGADVLVAGSAVYGAENPAEAIDSIREKAEAA 221
>gi|326790881|ref|YP_004308702.1| ribulose-phosphate 3-epimerase [Clostridium lentocellum DSM 5427]
gi|326541645|gb|ADZ83504.1| ribulose-phosphate 3-epimerase [Clostridium lentocellum DSM 5427]
Length = 220
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 103/218 (47%), Positives = 150/218 (68%), Gaps = 3/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PSILAADF+ L +EI ++ + GA IH DVMDG FVPNIS GA V +S+R + V
Sbjct: 2 IHLSPSILAADFANLQKEIESVQEGGATYIHVDVMDGAFVPNISLGAPVAKSIRPHIKGV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + ++ AG DI+T H E++ HI R ++ IH +G K G+++NP TPV+
Sbjct: 62 MDVHLMIEAPERYLEDFKVAGADILTVHLEATHHIHRVVQRIHDLGMKAGISLNPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSR 181
+LE +I++ID++LIM+VNPGFGGQ+ I ++ K+ Q KAL K + + +EVDGGVT
Sbjct: 122 LLEPIIEDIDLVLIMSVNPGFGGQKFIPYSLEKLMQVKALAQKHNRLDLLIEVDGGVTMD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N +++++AGA++LV GSS F+ K + AK L +S
Sbjct: 182 NAEAIIKAGANVLVAGSSVFDGKAATANAKAFVKLFES 219
>gi|227536778|ref|ZP_03966827.1| ribulose-phosphate 3-epimerase [Sphingobacterium spiritivorum ATCC
33300]
gi|227243334|gb|EEI93349.1| ribulose-phosphate 3-epimerase [Sphingobacterium spiritivorum ATCC
33300]
Length = 226
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 137/211 (64%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF++L ++I + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 8 IAPSVLAADFAKLYDDIQMVNNSEADWFHIDIMDGVFVPNISFGFPVMQAIAKHATKPLD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ + D+G +IT H E+ H+ R+L I +G K GVA+NP TPV++L
Sbjct: 68 VHLMIVDPDRYLKVCKDSGAAVITVHYEACTHLHRTLAAIKELGCKAGVALNPHTPVSLL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+DVI +ID++ +M+VNPGFGGQ+ IE T KI++ + L ++ +E+DGGV +NI
Sbjct: 128 KDVIHDIDLVCLMSVNPGFGGQKFIEQTYNKIKELRMLAAGVNDNLLIEIDGGVGHQNIG 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+L++AGAD+LV GSS F + L
Sbjct: 188 ALLRAGADVLVAGSSVFAAENPTQTIADLKA 218
>gi|55615453|ref|XP_516061.1| PREDICTED: ribulose-phosphate 3-epimerase isoform 10 [Pan
troglodytes]
Length = 246
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 82/235 (34%), Positives = 121/235 (51%), Gaps = 22/235 (9%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK------- 111
D FD H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQ 120
Query: 112 -----------KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
+ G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 121 AEVQWHSQGPLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHW 180
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ S+ +EVDGGV + +AGA+++V GS+ + S L +
Sbjct: 181 LRTQF--PSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 233
>gi|217966142|ref|YP_002351820.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|217335412|gb|ACK41206.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HCC23]
gi|307572248|emb|CAR85427.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes L99]
Length = 214
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ ++ + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIKKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I STI +R + + +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFINSTIKNMRYLDNWRRENNGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF +++ + L
Sbjct: 184 KCKQAGVDVLVAGSYFFGATDKVACIQGLKK 214
>gi|86148973|ref|ZP_01067205.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597041|ref|ZP_01100277.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562106|ref|YP_002343885.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85840331|gb|EAQ57588.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190730|gb|EAQ94703.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112359812|emb|CAL34599.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284925718|gb|ADC28070.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315928221|gb|EFV07538.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930012|gb|EFV09155.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
305]
Length = 215
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 125/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ I+FH ES H R I + G + +NP TP+
Sbjct: 61 LDVHLMVKDVSKFVDLFISLKPKFISFHMESEVHPIRLCEYIRSQGIHPAIVLNPHTPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLIHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L ++GAD+LV GS F+ Y ++ LK
Sbjct: 181 ASDLEESGADILVAGSYIFSSND---YKTAISSLK 212
>gi|300773362|ref|ZP_07083231.1| ribulose-phosphate 3-epimerase [Sphingobacterium spiritivorum ATCC
33861]
gi|300759533|gb|EFK56360.1| ribulose-phosphate 3-epimerase [Sphingobacterium spiritivorum ATCC
33861]
Length = 226
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 137/211 (64%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAADF++L ++I + + A H D+MDG FVPNISFG V++++ ++ D
Sbjct: 8 IAPSVLAADFAKLYDDIQMVNNSEADWFHIDIMDGVFVPNISFGFPVMQAIAKHATKPLD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D ++ + D+G +IT H E+ H+ R+L I +G K GVA+NP TPV++L
Sbjct: 68 VHLMIVDPDRYLKVCKDSGAAVITVHYEACTHLHRTLAAIKELGCKAGVALNPHTPVSLL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
+DVI +ID++ +M+VNPGFGGQ+ IE T KI++ + L ++ +E+DGGV +NI
Sbjct: 128 KDVIRDIDLVCLMSVNPGFGGQKFIEQTYNKIKELRMLAAGVNDNLLIEIDGGVGHQNIG 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+L++AGAD+LV GSS F + L
Sbjct: 188 ALLRAGADVLVAGSSVFAAENPTQTIADLKA 218
>gi|114632628|ref|XP_508010.2| PREDICTED: ribulose-phosphate 3-epimerase isoform 2 [Pan
troglodytes]
gi|83674974|gb|ABC40668.1| rcRPE [Pan troglodytes]
Length = 228
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 119/217 (54%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLQMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A A + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFG Q+ +E +PK+ + S+ +E DGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQF--PSLDIEGDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
S + +AGA+++V GS+ + S L +
Sbjct: 179 GSDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215
>gi|153950960|ref|YP_001398511.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. doylei
269.97]
gi|152938406|gb|ABS43147.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. doylei
269.97]
Length = 215
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ I+FH ES H R I + + +NP TP+
Sbjct: 61 LDVHLMVKDVSKFVDLFIPLKPKFISFHMESEAHPIRLCDYIRSQEIHPAIVLNPHTPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L ++GAD+LV GS F+ + L
Sbjct: 181 ASDLEESGADILVAGSYIFSSNDYKTAISSLK 212
>gi|224476331|ref|YP_002633937.1| putative ribulose-5-phosphate 3-epimerase [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420938|emb|CAL27752.1| putative ribulose-5-phosphate 3-epimerase [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 217
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 133/217 (61%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF L E+ + +AG +HFDVMDG FVPNIS G ++ ++ + +D
Sbjct: 2 VKIYPSLLSADFLNLKAELEALEQAGVDGVHFDVMDGQFVPNISIGLPILEAVNAGTDLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI ++ I A G D+I+ H E++PHI R+++ IHA G K GV INP TPVA
Sbjct: 62 IDVHLMIEDPENFIPEFAAKGADMISVHAEATPHIHRAIQLIHAHGAKAGVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E ++ ++D +LIMTVNPGFGGQ I I K+ A K + +EVDGG+
Sbjct: 122 MIEPILHDVDYVLIMTVNPGFGGQAFISQNIDKVSALHAYKEKHDLDFDIEVDGGINEVT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ V AGA +LV GS FF Q Y K ++ LK
Sbjct: 182 AEQCVNAGATMLVTGSYFFKQTD---YGKVVSALKAQ 215
>gi|120609141|ref|YP_968819.1| ribulose-5-phosphate 3-epimerase [Acidovorax citrulli AAC00-1]
gi|326315322|ref|YP_004232994.1| ribulose-phosphate 3-epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|89111167|dbj|BAE80257.1| D-ribulose-5-phosphate 3-epimerase [Acidovorax avenae subsp.
avenae]
gi|89111200|dbj|BAE80289.1| D-ribulose-5-phosphate 3-epimerase [Acidovorax avenae subsp.
avenae]
gi|120587605|gb|ABM31045.1| ribulose-5-phosphate 3-epimerase [Acidovorax citrulli AAC00-1]
gi|323372158|gb|ADX44427.1| ribulose-phosphate 3-epimerase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 226
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 95/223 (42%), Positives = 140/223 (62%), Gaps = 8/223 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++FG V ++L+ +
Sbjct: 1 MTRQFRIAPSILSADFARLGEEVKNVIASGADWVHFDVMDNHYVPNLTFGPMVCQALKPH 60
Query: 61 S------DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM+ +D+ A+AG D I+FHP++S H+ RS++ I + G K G
Sbjct: 61 AVTPDGRPAPIDVHLMVQPVDALAAAFAEAGADYISFHPDASAHVHRSIQAITSKGIKAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP P+ +L+ VID+ID+IL+M+VNPGFGGQ I+S + KI + I + I L
Sbjct: 121 LVFNPAAPLDVLDWVIDDIDLILVMSVNPGFGGQSFIDSALRKIEALRRRIDACGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
EVDGGV NI+ + AGAD V GS+ F + + +
Sbjct: 181 EVDGGVKVDNIRRVADAGADTFVAGSAIFGKPDYRAVIDAMRA 223
>gi|327260711|ref|XP_003215177.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Anolis
carolinensis]
Length = 228
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + + GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLAALGAECTRMLDCGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
FD H+M++ + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQQPFFDMHMMVAKPEQWVKSMAVAGANQYTFHIEATDNAGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ S L +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMKSDDPRSVINLLRN 215
>gi|163782821|ref|ZP_02177817.1| ribulose-5-phosphate 3-epimerase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881942|gb|EDP75450.1| ribulose-5-phosphate 3-epimerase [Hydrogenivirga sp. 128-5-R1-1]
Length = 223
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 90/219 (41%), Positives = 136/219 (62%), Gaps = 2/219 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILA D+ +GE+I + GA IHFDVMDG FVPNI+ G +++ S+ + D
Sbjct: 5 LAPSILAGDWWNIGEQIEATLRGGADIIHFDVMDGHFVPNITVGPEILTSISRRVNVPVD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I +AG I+ H E+ PHI R+L I +G K GV +NP TP++ +
Sbjct: 65 AHLMIENPDRYIPSFVEAGAKWISVHIENVPHIHRTLTLIRELGAKAGVVLNPGTPLSAV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+ I D +L+M+VNPGF GQ+ IE ++ ++ + + + +EVDGGV N+
Sbjct: 125 EEAIHYADYVLLMSVNPGFSGQRFIERSLERLSLLRDMRDRLNPDCLIEVDGGVKEDNVV 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+V+AGAD++VVGS F+ K + ++L DL SA+A+
Sbjct: 185 EVVRAGADVVVVGSGIFSAKDVEAQTRKLKDLISSAVAV 223
>gi|325971210|ref|YP_004247401.1| ribulose-phosphate 3-epimerase [Spirochaeta sp. Buddy]
gi|324026448|gb|ADY13207.1| ribulose-phosphate 3-epimerase [Spirochaeta sp. Buddy]
Length = 222
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M S+ I PS+L+ADFSR EE+ +I K+GA+ +H DVMDG FVPNI+FG I+ LRS
Sbjct: 1 MEKTSLIIAPSMLSADFSRTAEEVESINKSGAQWVHLDVMDGMFVPNITFGPKFIKDLRS 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+SD VFD HLM+ + +I A +G D IT H E+S H+ R+L+ I G K GV++ P
Sbjct: 61 HSDLVFDTHLMVDKPERYITHFAQSGSDYITVHAEASVHLHRTLQMIKDSGCKAGVSLIP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
+ + + ++D +D+ILIMTVNPGFGGQ LI ST+ KI + ++ ++ L VDGG
Sbjct: 121 SSSITSILPILDMVDLILIMTVNPGFGGQSLIPSTLEKISELASIRTQKGYKYLLSVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V + + + GAD+ V GS+FF ++ + + + D
Sbjct: 181 VNLSTVNMIAERGADVAVCGSAFFCEQDRSGFIQAMWD 218
>gi|294790915|ref|ZP_06756073.1| ribulose-phosphate 3-epimerase [Scardovia inopinata F0304]
gi|294458812|gb|EFG27165.1| ribulose-phosphate 3-epimerase [Scardovia inopinata F0304]
Length = 221
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SIQI PSIL+ADF L E+ I A +H DVMD FVPN++ G V++ + S
Sbjct: 2 SIQIAPSILSADFVNLESELKTIRT--ADLVHVDVMDHHFVPNLTLGEPVVQRICQVSPI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G D +TFH ++ R R +H MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEFARCGADSVTFHMGATHAPIRLARQLHDMGVKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L D++DE DMILIMTV PGFGGQ+ + + + K+R+ + I + + ++VDGGV+
Sbjct: 120 EPLFDILDEFDMILIMTVEPGFGGQKFLSNQMDKVRRLRDQITAKGLDTHIQVDGGVSPA 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + + +SA
Sbjct: 180 TAAQVAKAGADVLVAGSAVYGADNPAEAIAAIREQAQSA 218
>gi|332305105|ref|YP_004432956.1| ribulose-phosphate 3-epimerase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172434|gb|AEE21688.1| ribulose-phosphate 3-epimerase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 225
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 93/221 (42%), Positives = 140/221 (63%), Gaps = 7/221 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++ G + ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGAEVDAVLAAGADVIHFDVMDNHYVPNLTIGPMICKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG +I+FHPE+S H+ RS++ I G K G+ INP
Sbjct: 60 GVTAEIDVHLMVEPVDEMIASFAKAGASMISFHPEASRHVDRSIQLITDSGCKPGLVINP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ + ++ +L+M+VNPGFGGQ I T+ K++ K L+ R I +E+DGG
Sbjct: 120 GTSLDCLDYTLHKLHHVLLMSVNPGFGGQSFIPETLDKLQIVKELVKASGRDIRIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V NI+++ +AGAD+ V GS+ FNQ Y + ++++++
Sbjct: 180 VKVDNIRAIAEAGADMFVAGSAIFNQPD---YRQVIDEMRE 217
>gi|329736611|gb|EGG72877.1| ribulose-phosphate 3-epimerase [Staphylococcus epidermidis VCU045]
Length = 214
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PS+L+ DF L EE+ + A +HFDVMDG FVPNIS G ++ ++R S
Sbjct: 2 VKILPSLLSIDFLNLKEELQLLETAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++IN+ A+ G D+I+ H ES+ HI R++ I +GKK GV INP T V
Sbjct: 62 IDVHLMIEKPENYINLFAEHGADMISVHVESTTHIHRAIEQIKQLGKKAGVVINPGTSVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ ++ +D +L+MTVNPGFGGQ IE + KI Q L + + +EVDGG+ +
Sbjct: 122 TILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K V+ GA +LV GS FF Q+ L +
Sbjct: 182 SKRCVEQGATMLVTGSYFFKQEDYAKVTSLLKE 214
>gi|259503539|ref|ZP_05746441.1| ribulose-phosphate 3-epimerase [Lactobacillus antri DSM 16041]
gi|259168617|gb|EEW53112.1| ribulose-phosphate 3-epimerase [Lactobacillus antri DSM 16041]
Length = 222
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 136/217 (62%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + +AGA+ +H DVMDG FVP+IS+G ++++R ++
Sbjct: 7 IKVAPSILSADYVNLQKDIEKVDQAGAEYLHIDVMDGTFVPSISYGPGFVKAIRPVTNMT 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 67 LDVHLMVQSPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ +EVDGGV +
Sbjct: 127 LIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKREKGYDFDIEVDGGVNDQT 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K QAGA + V GS FN A+R+ L+ +
Sbjct: 187 VKDCYQAGATVAVAGSYVFNADDP---AERIEALRNA 220
>gi|154487357|ref|ZP_02028764.1| hypothetical protein BIFADO_01207 [Bifidobacterium adolescentis
L2-32]
gi|154083875|gb|EDN82920.1| hypothetical protein BIFADO_01207 [Bifidobacterium adolescentis
L2-32]
Length = 224
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +
Sbjct: 3 TMTIQIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVARICQVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 61 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 121 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + + ++A
Sbjct: 181 PKTAHIVAEAGADVLVAGSAVYGAENPAEAIDSIREKAEAA 221
>gi|86153820|ref|ZP_01072023.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121612304|ref|YP_001000158.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005116|ref|ZP_02270874.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81-176]
gi|85842781|gb|EAQ59993.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87250347|gb|EAQ73305.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
81-176]
Length = 215
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEAAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ I+FH ES H R I + G + +NP T +
Sbjct: 61 LDVHLMVKDVSKFIDLFIPLKPKFISFHIESEVHPIRLCEYIRSQGIHPAIVLNPHTSID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L ++GAD+LV GS F+ + L
Sbjct: 181 ASDLEESGADILVAGSYIFSSNDYKTAISSLK 212
>gi|297243506|ref|ZP_06927438.1| pentose-5-phosphate-3-epimerase [Gardnerella vaginalis AMD]
gi|296888551|gb|EFH27291.1| pentose-5-phosphate-3-epimerase [Gardnerella vaginalis AMD]
Length = 221
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G +++ + +
Sbjct: 2 NIQIAPSILSADFCNLERDLDAI--SNADLVHVDVMDHHFVPNLTLGEPIVKRICEVTKL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ + + + K+R+ + I +R ++ ++VDGGV+
Sbjct: 120 EPIFDILDEFDMVLIMTVEPGFGGQKFLANQMNKVRRLRDEITRRGLNTHIQVDGGVSPS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + + + + K+A
Sbjct: 180 TAAIVAEAGADVLVAGSAVYGAESPREAIEAIRNTAKAA 218
>gi|315283908|ref|ZP_07871937.1| ribulose-phosphate 3-epimerase [Listeria marthii FSL S4-120]
gi|313612448|gb|EFR86561.1| ribulose-phosphate 3-epimerase [Listeria marthii FSL S4-120]
Length = 214
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAENAGADYLHIDVMDGHFVPNLTFGIDMVEQISKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PH+ R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHVHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ IEST +R + S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIESTTKNMRYLDNWRRENHGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF + + + L
Sbjct: 184 KCKQAGVDVLVAGSYFFGAADKAACIQGLKQ 214
>gi|74005315|ref|XP_861314.1| PREDICTED: similar to Ribulose-phosphate 3-epimerase
(Ribulose-5-phosphate-3-epimerase) (HUSSY-17) isoform 5
[Canis familiaris]
Length = 244
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 83/233 (35%), Positives = 119/233 (51%), Gaps = 20/233 (8%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK------- 111
D FD H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKFGWKTG 120
Query: 112 ---------KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ +
Sbjct: 121 SDRQGRTEAPVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLR 180
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
S+ +EVDGGV I +AGA+++V GS+ S L +
Sbjct: 181 TQF--PSLDIEVDGGVGPDTIHKCAEAGANMIVSGSAIMRSDDPRSVINLLRN 231
>gi|156063452|ref|XP_001597648.1| hypothetical protein SS1G_01844 [Sclerotinia sclerotiorum 1980]
gi|154697178|gb|EDN96916.1| hypothetical protein SS1G_01844 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 252
Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 88/245 (35%), Positives = 134/245 (54%), Gaps = 32/245 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF++LG+E S+ GA +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFAKLGKECSDTIGQGADWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VDRPTAKHGKGTFDCHMMIAEPKKWVKEFQKAGCDLYCFHYEAAISSTTAESPETTSDSK 120
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQL 150
+ + +R IH G G+AI P+T V +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 TNPKELIRYIHDNGMLAGIAIKPDTKVDVLWDILENTEEKERPDMVLVMTVHPGFGGQKF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ S +PK+ + + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 MASELPKVAELRKRY--PDLNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAKDPSEVI 238
Query: 211 KRLND 215
+L +
Sbjct: 239 AKLRE 243
>gi|77361625|ref|YP_341200.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas haloplanktis
TAC125]
gi|76876536|emb|CAI87758.1| D-ribulose-5-phosphate 3-epimerase [Pseudoalteromonas haloplanktis
TAC125]
Length = 227
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF++LGE++ ++ AGA +HFDVMD +VPN++ G V ++LR+Y
Sbjct: 5 EKKYLIAPSILSADFAKLGEDVDSVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRNYG 64
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS I A+AG IITFHPE+S HI R+L+ I G + G+ NP
Sbjct: 65 IKAPIDVHLMVKPVDSLIPQFAEAGASIITFHPEASEHIDRTLQLIKDHGCQAGLVFNPG 124
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++ L+ V+D+ID+ILIM+VNPGFGGQ I T+ K+RQAK I + R+I LEVDGG+
Sbjct: 125 TSLSFLDHVMDKIDVILIMSVNPGFGGQSFIAHTLEKLRQAKQRIVESGRNIRLEVDGGI 184
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD+ V GS+ FNQ ++ +
Sbjct: 185 KVDNIAAAAEAGADMFVAGSAIFNQPNYQEVIAQMRE 221
>gi|16799580|ref|NP_469848.1| hypothetical protein lin0505 [Listeria innocua Clip11262]
gi|16412945|emb|CAC95737.1| lin0505 [Listeria innocua Clip11262]
Length = 216
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 134/217 (61%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F E L L K L
Sbjct: 183 CTLAGADLIVVGSYLF----EGDIEANLEKLSKGVLT 215
>gi|18395962|ref|NP_566153.1| ribulose-phosphate 3-epimerase, cytosolic, putative /
pentose-5-phosphate 3-epimerase, putative [Arabidopsis
thaliana]
gi|30678440|ref|NP_850495.1| ribulose-phosphate 3-epimerase, cytosolic, putative /
pentose-5-phosphate 3-epimerase, putative [Arabidopsis
thaliana]
gi|13877557|gb|AAK43856.1|AF370479_1 putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
gi|21592447|gb|AAM64398.1| putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
gi|25084145|gb|AAN72185.1| putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
gi|332640203|gb|AEE73724.1| ribulose-phosphate 3-epimerase [Arabidopsis thaliana]
gi|332640204|gb|AEE73725.1| ribulose-phosphate 3-epimerase [Arabidopsis thaliana]
Length = 225
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 76/221 (34%), Positives = 127/221 (57%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + + GA +H D+MDG FVPN++ GA VI SLR ++++
Sbjct: 3 SPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNA 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ ++ +A AG TFH E + + ++ + I + G + GVA+ P TP
Sbjct: 63 YLDCHLMVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTP 122
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V + +++ ++M+L+MTV PGFGGQ+ + + K+R + ++ ++VDGG+
Sbjct: 123 VEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALRQ--KYPTLDIQVDGGLG 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + AGA+ +V GSS F L + A
Sbjct: 181 PSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTSVEKA 221
>gi|254581202|ref|XP_002496586.1| ZYRO0D03520p [Zygosaccharomyces rouxii]
gi|238939478|emb|CAR27653.1| ZYRO0D03520p [Zygosaccharomyces rouxii]
Length = 238
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 16/227 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PSILA DF+ LG E + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 1 MVKPI-IAPSILACDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRS 59
Query: 61 SD-------------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
+ FDCH+M+ + + + A G D TFH E++ ++ I
Sbjct: 60 VPRGDDPNNTANKPAAFFDCHMMVENPERWVEDFAKCGADQFTFHYEATKDPVSLVKLIK 119
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK 167
+ G + A+ P TPV +L ++ +DM L+MTV PGFGGQ+ + +PK+ ++
Sbjct: 120 SHGIRAACAVKPGTPVDVLFELAPHLDMALVMTVEPGFGGQKFMADMMPKVETLRSKF-- 177
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++VDGG+ I +AGA+++V G+S F +
Sbjct: 178 PHLDIQVDGGLGKATIPQAAEAGANVIVAGTSVFTATDPEEVISFMK 224
>gi|316975563|gb|EFV58983.1| ribulose-phosphate 3-epimerase [Trichinella spiralis]
Length = 232
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 4/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL +D + L E + KAGA +H DVMDG FVPNIS G VI+ LR +
Sbjct: 6 TCRIGPSILNSDLATLSLECDRLLKAGADFLHLDVMDGHFVPNISIGPAVIQCLRKHIPR 65
Query: 64 V--FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
FD HLM+ + I +A+AG D TFH E+ ++ + I A G K G+AI P T
Sbjct: 66 PVIFDVHLMVDRPEQWIMPMAEAGTDYFTFHLEACTNVDEVITEIKATGMKCGIAIKPNT 125
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P+ + + +DM+L+MTV PGFGGQ + + K+R+ + K + +EVDGGV
Sbjct: 126 PLEDVLPYLPRVDMLLVMTVEPGFGGQSFLLEMLEKVRKCRMQFPK--LDIEVDGGVGPA 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI +AGA+++V G++ S +
Sbjct: 184 NINQCAEAGANVIVSGTAIVKSNDPESTMNFMRQ 217
>gi|121606548|ref|YP_983877.1| ribulose-phosphate 3-epimerase [Polaromonas naphthalenivorans CJ2]
gi|120595517|gb|ABM38956.1| ribulose-5-phosphate 3-epimerase [Polaromonas naphthalenivorans
CJ2]
Length = 230
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 139/221 (62%), Gaps = 8/221 (3%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-- 60
P+ +I PS+L+ADF+RLG+E+ + GA IHFDVMD +VPN++FG + ++L+ +
Sbjct: 6 PTYRIAPSLLSADFARLGDELKAVIAGGADWIHFDVMDNHYVPNLTFGPMICQALKPHAK 65
Query: 61 ----SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
+ D HLM+ +DS ADAG D+I+FHPE+S H+ RS++ I A G K G+
Sbjct: 66 RADGTAVPIDVHLMVQPVDSLAAAFADAGADLISFHPEASSHVHRSVQAIKARGCKAGLV 125
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEV 174
NP TP+ +L+ ID+ID+ILIM+VNPGFGGQ I+S + KI QA+ I R I LEV
Sbjct: 126 FNPATPLDVLDWTIDDIDLILIMSVNPGFGGQSFIDSALRKIEQARKRIEASGRDIRLEV 185
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
DGG+ NI + AGAD V GS+ F + + +
Sbjct: 186 DGGIKIDNIARVAAAGADTFVAGSAIFGKPDYKAVIDAMRA 226
>gi|269140598|ref|YP_003297299.1| ribulose-phosphate 3-epimerase [Edwardsiella tarda EIB202]
gi|267986259|gb|ACY86088.1| ribulose-phosphate 3-epimerase [Edwardsiella tarda EIB202]
gi|304560385|gb|ADM43049.1| Ribulose-phosphate 3-epimerase [Edwardsiella tarda FL6-60]
Length = 225
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 143/221 (64%), Gaps = 7/221 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MNPYL-IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I ADAG IITFHPE+S H+ R+L+ I A G K G+ +NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFADAGASIITFHPEASEHVDRTLQLIRACGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D +D IL+M+VNPGFGGQ I ST+ K+RQ + I + + EVDGG
Sbjct: 120 ATPLSCLDYVMDRLDTILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDASGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V NI ++ AGAD+ V GS+ F YA + D+++
Sbjct: 180 VKVDNIGAIAAAGADMFVAGSAIFGH---ADYAAVITDMRR 217
>gi|83589765|ref|YP_429774.1| ribulose-5-phosphate 3-epimerase [Moorella thermoacetica ATCC
39073]
gi|83572679|gb|ABC19231.1| ribulose-5-phosphate 3-epimerase [Moorella thermoacetica ATCC
39073]
Length = 223
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 133/216 (61%), Gaps = 5/216 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+LAADF+ L E+ + + GA +H D+MDG FVPN++ G V+ +LR +S VF
Sbjct: 3 IIAPSLLAADFANLQGEVEAVARGGADWLHLDIMDGHFVPNLTIGPAVVAALRPHSQLVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S + I A AG D I+ H E+ H+ R L+ I G + VA+NP TP+++
Sbjct: 63 DVHLMLSRPEDFILPFARAGADYISVHAEACTHLHRVLQQIREAGCRPAVALNPATPLSV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
L+ V+ E++MIL+MTVNPGFGGQ+ I + +PKI A + + + + EVDGG+
Sbjct: 123 LDHVLGEVEMILLMTVNPGFGGQEFIPAMLPKIASLAAKLRENRLDILLEVDGGINPETA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ QAGA +LV GS+ F + + +L+++
Sbjct: 183 AAACQAGAGVLVAGSAVFGCPDRGA---AIRELRQA 215
>gi|42520556|ref|NP_966471.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410295|gb|AAS14405.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 225
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 136/222 (61%), Gaps = 10/222 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF++LGEE+ I+ G IH DVMDG FVPNI+ G V+ ++R YS+
Sbjct: 2 SIKIAPSILSADFAKLGEEVRKISDLGVDYIHIDVMDGNFVPNITIGPSVVSAIRKYSNL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM--------GKKTGV 115
FD HLM+ S HI +AG DIIT H E H+ R +R I + + GV
Sbjct: 62 PFDVHLMVKSPGKHIESFINAGADIITVHAEVETHLERLIRKIKSYKNVNDEKKPIQVGV 121
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LE 173
+I P T ++LE +I E+D++LIMTVNPGFGGQ+ I S + KI K +I +R++ +
Sbjct: 122 SIVPSTSPSVLEYIIHELDIVLIMTVNPGFGGQEFIHSQLNKISTIKKMIQERNLKTQIS 181
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
VDGG+ N +++AGAD+LV GS+ F + L +
Sbjct: 182 VDGGINFFNAADIIKAGADILVAGSAIFKAEDIKKAINYLKN 223
>gi|283783267|ref|YP_003374021.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis 409-05]
gi|283441353|gb|ADB13819.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis 409-05]
Length = 221
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 122/219 (55%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G +++ + +
Sbjct: 2 NIQIAPSILSADFCNLERDLDAI--SNADLVHVDVMDHHFVPNLTLGEPIVKRICEVTKL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV+
Sbjct: 120 EPIFDILDEFDMVLIMTVEPGFGGQKFLANQMNKVRRLRDEITRRGLQTHIQVDGGVSPS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + + + + K+A
Sbjct: 180 TAAIVAEAGADVLVAGSAVYGAESPKEAIEAIRNTAKAA 218
>gi|116192425|ref|XP_001222025.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181843|gb|EAQ89311.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 252
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 88/245 (35%), Positives = 126/245 (51%), Gaps = 32/245 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E S + GA +H D+MDG FVPN++FG V+ +RS+
Sbjct: 1 MAPKAIIAPSILSADFANLGAECSRTIEQGADWLHVDIMDGHFVPNLTFGPPVVAKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESSPH-------------- 98
D FDCH+MI+ + AGCD+ FH E++ +
Sbjct: 61 VDKPTESHGKGTFDCHMMIAEPKKWVKEFKAAGCDLYCFHYEAAVNSTAAESPEAHSEHK 120
Query: 99 --IRRSLRTIHAMGKKTGVAINPETPVAILEDVID------EIDMILIMTVNPGFGGQQL 150
R +R IH G G+AI P T +L +V+D DM+L+MTV PGFGGQ+
Sbjct: 121 TSPRELIRYIHQQGMLAGIAIKPATKADVLYEVLDSPDETERPDMVLVMTVEPGFGGQKF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ S +PK+ +A +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 MASELPKVEALRARY--PDLNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAKDPAGVI 238
Query: 211 KRLND 215
L +
Sbjct: 239 ALLRE 243
>gi|145295719|ref|YP_001138540.1| ribulose-phosphate 3-epimerase [Corynebacterium glutamicum R]
gi|140845639|dbj|BAF54638.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 219
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADFSRLGE++ + A IH D+MDG FVPN+SFGAD+ ++ +D D
Sbjct: 8 IAPSILAADFSRLGEQVLAVPD--ADWIHVDIMDGHFVPNLSFGADITAAVNRVTDKELD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + ++ DAG D I FH E++ + I + G + G ++ P TP+
Sbjct: 66 VHLMIENPEKWVDNYIDAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGTPIEDY 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D ++ D +++M+V PGFGGQ + + K+R + +I +R ++ +E+DGG++S+ IK
Sbjct: 126 LDDLEHFDEVIVMSVEPGFGGQSFMPDQLEKVRTLRKVIDERGLNTVIEIDGGISSKTIK 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
AG D V GS+ + + + L L
Sbjct: 186 QAADAGVDAFVAGSAVYGAEDPNKAIQELRALA 218
>gi|332532312|ref|ZP_08408192.1| ribulose-phosphate 3-epimerase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038179|gb|EGI74625.1| ribulose-phosphate 3-epimerase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 227
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 99/217 (45%), Positives = 141/217 (64%), Gaps = 3/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF++LGE++ + +AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 5 EQKYLIAPSILSADFAKLGEDVDKVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYG 64
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS I + A+AG IITFHPE+S H+ R+++ I G K G+ NP
Sbjct: 65 ITAPIDVHLMVKPVDSIIPLFAEAGASIITFHPEASEHVDRTIQLIKDHGCKAGLVFNPA 124
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++ L+ VID++D IL+M+VNPGFGGQ I T+ K+RQAK I + R I LEVDGG+
Sbjct: 125 TSLSYLDHVIDKLDTILLMSVNPGFGGQSFIPHTLEKLRQAKQRIIESGRDIRLEVDGGI 184
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + +AGAD+ V GS+ FNQ ++ +
Sbjct: 185 KVDNIAAAARAGADMFVAGSAIFNQPDYKVVIDQMRE 221
>gi|325284222|ref|YP_004256763.1| ribulose-phosphate 3-epimerase [Deinococcus proteolyticus MRP]
gi|324316031|gb|ADY27146.1| ribulose-phosphate 3-epimerase [Deinococcus proteolyticus MRP]
Length = 227
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 86/201 (42%), Positives = 132/201 (65%), Gaps = 2/201 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + + PS+LA DF+RLGEE+ + +AG H DVMDG FVPNISFG ++ + R S
Sbjct: 9 PPVLLSPSLLACDFARLGEELHTLEQAGVPWAHVDVMDGMFVPNISFGLPILAAARRVSP 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ A+AG D +T ES+ HI R++ I +GK+ GV +NP TP
Sbjct: 69 LYMDVHLMIEQPERYLRDFAEAGADGLTVQVESTRHIHRAVGQIRELGKRAGVTLNPGTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
+ + V+ ++D++L+M+VNPGFGGQ+ I +++ ++R+ + ++ L+VDGGVT+
Sbjct: 129 LEAIRPVLADVDLVLVMSVNPGFGGQKFIPASVERVREVRRMLDDIGSQADLQVDGGVTA 188
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
+N ++LV AGA LV GS+ F
Sbjct: 189 QNARALVDAGATNLVAGSAIF 209
>gi|238021290|ref|ZP_04601716.1| hypothetical protein GCWU000324_01189 [Kingella oralis ATCC 51147]
gi|237868270|gb|EEP69276.1| hypothetical protein GCWU000324_01189 [Kingella oralis ATCC 51147]
Length = 224
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + +LR ++ +
Sbjct: 2 KYRIAPSILSADFARLGEEVRNVIAAGADMIHFDVMDNHYVPNLTFGPMICAALRPHTSA 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +D I AG DIITFHPE+S H+ RSL I GK+ G+ +NP T +
Sbjct: 62 PIDVHLMIEPVDDMIGAFIKAGADIITFHPEASRHVDRSLSLIKDAGKQAGLVLNPATSI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGG 177
A+LE+V+D++DM+L+M+VNPGFGGQ+ I T+ K+RQ +AL+ R I +EVDGG
Sbjct: 122 AVLENVLDKLDMVLLMSVNPGFGGQKFIPHTLEKLRQTRALLDAYEQQSGRRIRIEVDGG 181
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ NI + AGAD V GS+ F+ +
Sbjct: 182 IKVDNIAAAAAAGADTFVAGSAIFDADDYAGVIAAMRA 219
>gi|6322341|ref|NP_012414.1| Rpe1p [Saccharomyces cerevisiae S288c]
gi|1173139|sp|P46969|RPE_YEAST RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|609674|emb|CAA58554.1| Ribulose-5-Phosphate-Epimerase [Saccharomyces cerevisiae]
gi|1008313|emb|CAA89415.1| POS18 [Saccharomyces cerevisiae]
gi|45269607|gb|AAS56184.1| YJL121C [Saccharomyces cerevisiae]
gi|151945007|gb|EDN63262.1| D-ribulose-5-phosphate 3-epimerase [Saccharomyces cerevisiae
YJM789]
gi|190409386|gb|EDV12651.1| D-ribulose-5-Phosphate 3-epimerase [Saccharomyces cerevisiae
RM11-1a]
gi|256272132|gb|EEU07132.1| Rpe1p [Saccharomyces cerevisiae JAY291]
gi|285812783|tpg|DAA08681.1| TPA: Rpe1p [Saccharomyces cerevisiae S288c]
gi|290771113|emb|CAY80664.2| Rpe1p [Saccharomyces cerevisiae EC1118]
gi|323337050|gb|EGA78306.1| Rpe1p [Saccharomyces cerevisiae Vin13]
gi|323347943|gb|EGA82202.1| Rpe1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354405|gb|EGA86244.1| Rpe1p [Saccharomyces cerevisiae VL3]
Length = 238
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 121/228 (53%), Gaps = 16/228 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M I I PSILA+DF+ LG E + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 1 MVKPI-IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRS 59
Query: 59 -----------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
+ FDCH+M+ + + ++ A G D TFH E++ ++ I
Sbjct: 60 VPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIK 119
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK 167
+ G K AI P T V +L ++ +DM L+MTV PGFGGQ+ +E +PK+ +A
Sbjct: 120 SKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVETLRAKF-- 177
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++++VDGG+ I +AGA+++V G+S F + +
Sbjct: 178 PHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAADPHDVISFMKE 225
>gi|260599687|ref|YP_003212258.1| ribulose-phosphate 3-epimerase [Cronobacter turicensis z3032]
gi|260218864|emb|CBA34219.1| Ribulose-phosphate 3-epimerase [Cronobacter turicensis z3032]
Length = 225
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 102/214 (47%), Positives = 142/214 (66%), Gaps = 6/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V+++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTARVLAAGADVVHFDVMDNHYVPNLTIGPMVLKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I ADAG IITFHPE+S HI RSL+ I G K G+ NP TP++
Sbjct: 66 DVHLMVKPVDRLIPDFADAGASIITFHPEASEHIDRSLQLIKEHGCKAGLVFNPATPLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+++ + I R I LEVDGGV NI
Sbjct: 126 LDYVMDKLDVILLMSVNPGFGGQSFIPQTLEKLKEVRQRIDASGRDIRLEVDGGVKVSNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGAD+ V GS+ FN+ Y +ND++
Sbjct: 186 GAIAAAGADMFVAGSAIFNEPD---YQNVINDMR 216
>gi|296129703|ref|YP_003636953.1| ribulose-phosphate 3-epimerase [Cellulomonas flavigena DSM 20109]
gi|296021518|gb|ADG74754.1| ribulose-phosphate 3-epimerase [Cellulomonas flavigena DSM 20109]
Length = 241
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ I PSIL+ADF+ L ++ + A A +H DVMD FVPN++ G V+R L +
Sbjct: 21 PVLINPSILSADFANLERDLQLV--ASADYVHVDVMDQHFVPNLTLGLPVVRRLAEVTPV 78
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ D A+AG +TFH E++ R R + A G + VA+ P +PV
Sbjct: 79 PLDVHLMVEDADRWAPQYAEAGAASVTFHAEATQAPVRLARELRAGGVRAAVALRPASPV 138
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
D++DE+DM+L+MTV PGFGGQ IE T+ K+R+A+A I ++VDGGV+
Sbjct: 139 EPFLDLLDEVDMVLVMTVEPGFGGQAFIEGTLAKVRRARAAIDASGAATWVQVDGGVSRD 198
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I + +AGA++ V GS+ F + L L +
Sbjct: 199 TIGRIARAGANVFVAGSAVFGADDVAQEVEALRRLAE 235
>gi|329905776|ref|ZP_08274202.1| Ribulose-phosphate 3-epimerase [Oxalobacteraceae bacterium
IMCC9480]
gi|327547527|gb|EGF32338.1| Ribulose-phosphate 3-epimerase [Oxalobacteraceae bacterium
IMCC9480]
Length = 223
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT P+ I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R
Sbjct: 1 MTMPTYHIAPSILSADFARLGEEVRNVVSAGADIIHFDVMDNHYVPNLTIGPLVCAAIRP 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG +II+FHPE+S HI R+L+ I G K G+ NP
Sbjct: 61 HVQVPIDVHLMVKPVDRLIPDFAKAGANIISFHPEASEHIDRTLQLIRDNGCKAGLVFNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ L+ V+D+ID+ILIM+VNPGFGGQ I + KI + LI + R+I LEVDGG
Sbjct: 121 GTPLHFLDHVMDKIDLILIMSVNPGFGGQSFIPEALKKIAAVRKLIDESGRTILLEVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ NI + +AGAD V GS+ F + +
Sbjct: 181 IKIENIAAAAKAGADTFVAGSAIFGAADYKTVIDAMRA 218
>gi|219110571|ref|XP_002177037.1| plastidic ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217411572|gb|EEC51500.1| plastidic ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 260
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 139/215 (64%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGEE+ N+ +AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 41 IAPSILSADFARLGEEVDNVLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPI 100
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D+ I DAG ITFHPE++ H+ RSL+ I G K G+ NP T +
Sbjct: 101 DVHLMVSPVDAAIQDFIDAGASYITFHPEATNHVDRSLQLIKNGGCKAGLVFNPATSLDA 160
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ V+D++D+IL+M+VNPGFGGQ I + + K R+A+ LI I LE+DGGV + NI
Sbjct: 161 AKFVMDKLDIILLMSVNPGFGGQAFIPAVLDKAREARQLIDDAGIDCRLEIDGGVKTENI 220
Query: 184 KSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLK 217
K + AG D+ V GS+ + +Y + ++ ++
Sbjct: 221 KEIKDAGVDMFVAGSAILKEPRTLEAYKETIDTMR 255
>gi|306822712|ref|ZP_07456090.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|304554257|gb|EFM42166.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
Length = 242
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +
Sbjct: 21 TMTIQIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVARICQVT 78
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 79 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 138
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 139 PVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVS 198
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + D ++A
Sbjct: 199 PKTAHIVAEAGADVLVAGSAVYGAESPAEAIGSIRDKAEAA 239
>gi|119356369|ref|YP_911013.1| ribulose-5-phosphate 3-epimerase [Chlorobium phaeobacteroides DSM
266]
gi|119353718|gb|ABL64589.1| ribulose-5-phosphate 3-epimerase [Chlorobium phaeobacteroides DSM
266]
Length = 221
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 129/215 (60%), Gaps = 2/215 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ + PSIL+ADF+ L I+ AGA IH D+MDG FVPNI+FG +++++ +
Sbjct: 4 KTTLLAPSILSADFTALASSIAVAENAGADWIHCDIMDGVFVPNITFGPFIVQAISRCTT 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D I AG + +T H E+ PH+ R+++ I ++G K GV+INP T
Sbjct: 64 MTIDTHLMIIDPDRFIADFIKAGSNQVTVHQEACPHLHRTIQLIKSLGAKAGVSINPGTT 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+A LE ++ ++D++L+M+VNPGFGGQ I S+I KI + R+ + VDGG+T
Sbjct: 124 LATLESILPDLDLVLLMSVNPGFGGQSFIPSSIDKIAALDRMRCDRNPEMIIAVDGGITE 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N +V AGAD L+ G++FF A++L
Sbjct: 184 DNAGVVVDAGADALIAGTAFFKAADPAEAARKLKS 218
>gi|171742898|ref|ZP_02918705.1| hypothetical protein BIFDEN_02015 [Bifidobacterium dentium ATCC
27678]
gi|171278512|gb|EDT46173.1| hypothetical protein BIFDEN_02015 [Bifidobacterium dentium ATCC
27678]
Length = 242
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +
Sbjct: 21 TMTIQIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVARICQVT 78
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 79 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 138
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 139 PVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVS 198
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + D ++A
Sbjct: 199 PKTAHIVAEAGADVLVAGSAVYGAESPAEAIDSIRDKAEAA 239
>gi|298252797|ref|ZP_06976591.1| pentose-5-phosphate-3-epimerase [Gardnerella vaginalis 5-1]
gi|297533161|gb|EFH72045.1| pentose-5-phosphate-3-epimerase [Gardnerella vaginalis 5-1]
Length = 221
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G +++ + +
Sbjct: 2 NIQIAPSILSADFCNLERDLDAI--SNADLVHVDVMDHHFVPNLTLGEPIVKRICEVTKL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYARLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ + + + K+R+ + I +R ++ ++VDGGV+
Sbjct: 120 EPIFDILDEFDMVLIMTVEPGFGGQKFLANQMNKVRRLRDEITRRGLNTHIQVDGGVSPS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + + + + K+A
Sbjct: 180 TAAIVAEAGADVLVAGSAVYGAESPKEAIEAIRNTAKAA 218
>gi|288817549|ref|YP_003431896.1| ribulose-phosphate 3-epimerase [Hydrogenobacter thermophilus TK-6]
gi|288786948|dbj|BAI68695.1| ribulose-phosphate 3-epimerase [Hydrogenobacter thermophilus TK-6]
gi|308751152|gb|ADO44635.1| ribulose-phosphate 3-epimerase [Hydrogenobacter thermophilus TK-6]
Length = 222
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 138/210 (65%), Gaps = 2/210 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LG+++ + + GA IHFDVMDG FVPNI+FG ++ S++++ + + D
Sbjct: 4 LAPSILSADFWHLGKQVEAVIRGGADLIHFDVMDGHFVPNITFGPVLLESIKNHCNLLLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I AG D I+ H E++PHI R+L+ I +G K GVAINP T ++ +
Sbjct: 64 AHLMIDNADMYIPEFVKAGADWISVHIENNPHIHRTLQLIKDLGAKAGVAINPGTSLSAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
E+ + D +L+M+VNPGFGGQ+ IE +I ++R+ + ++ SI +E+DGG+ N++
Sbjct: 124 EEALHYADFVLLMSVNPGFGGQRFIERSIERLRRLRQMVDSINPSILIEIDGGIKLENLE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD+ V+GS F+ +R+
Sbjct: 184 EVALAGADVFVIGSGIFSSDNVEEQTRRIK 213
>gi|167765261|ref|ZP_02437374.1| hypothetical protein BACSTE_03649 [Bacteroides stercoris ATCC
43183]
gi|167696889|gb|EDS13468.1| hypothetical protein BACSTE_03649 [Bacteroides stercoris ATCC
43183]
Length = 216
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+A+F+ L +I I + A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSANFAYLANDIEMINGSEADWVHVDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLMI + I + + G I+ H E+ PH+ R ++ I G V INP
Sbjct: 59 AEKPLDVHLMIVQPEKFIPEVKELGARIMNVHYEACPHLHRVVQQIREAGMLPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV++L D+I+++ M+LIM VNPGFGGQ+ I T+ K+R+ + LI +EVDGGV
Sbjct: 119 TPVSMLRDIINDVYMVLIMGVNPGFGGQKFIAHTVDKVRELRELITVTGSEALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD LV G++ F+ + L +L
Sbjct: 179 NLDTGSRLVDAGADALVAGNAVFSAPDPTEAIRALKNL 216
>gi|315638421|ref|ZP_07893598.1| ribulose-phosphate 3-epimerase [Campylobacter upsaliensis JV21]
gi|315481412|gb|EFU72039.1| ribulose-phosphate 3-epimerase [Campylobacter upsaliensis JV21]
Length = 215
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EEI +++AGA +H DVMDG FVPN++FG V+ + S S
Sbjct: 1 MYVAPSLLSANFLKLEEEIKAVSEAGADLLHIDVMDGHFVPNLTFGPCVLEKISSISSVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + ++FH E+ H + + G + +NP TP++
Sbjct: 61 LDVHLMVKDVPKFVELFLPLKPKFLSFHIEAEAHPIKLCEYLRTQGIHPAITLNPHTPIS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE +I+ +DM+L+M+VNPGFGGQ+ + KIR+ +ALI K+ +EVDGGV N
Sbjct: 121 SLEHLIEFVDMVLLMSVNPGFGGQKFLSLVYDKIRELRALIEKKQAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L +AGAD+LV G+ F+ + K L
Sbjct: 181 AADLEEAGADILVAGNYIFSSNDYKNAIKSLK 212
>gi|227503567|ref|ZP_03933616.1| ribulose-phosphate 3-epimerase [Corynebacterium accolens ATCC
49725]
gi|227075603|gb|EEI13566.1| ribulose-phosphate 3-epimerase [Corynebacterium accolens ATCC
49725]
Length = 231
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 7/221 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ I PSILAADF+RLGE++ I + A IH D+MDG FVPN+SFG D+ +++ +
Sbjct: 10 MPAPLISPSILAADFARLGEQLEAI--SNADWIHVDIMDGHFVPNLSFGPDITATVKRST 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAIN 118
D D HLMI + AG I FH E+ I +G + +I
Sbjct: 68 DKPLDVHLMIEDPAKWVETYIKAGATTIIFHVEAVEDEVAAVELAEKIRDLGARAAFSIK 127
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P+TP+ D + D +L+M+V PGFGGQ+ + + + K+R + I ++++ +E+DG
Sbjct: 128 PDTPIEPWLDKLHHFDEVLVMSVEPGFGGQKFMPAMLDKVRALRESIDQQNLDTVIEIDG 187
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G+ I +AG D V GS+ F + L L
Sbjct: 188 GIDPETIGLAAEAGCDSFVAGSAVFKSDDPAQAVEELRALA 228
>gi|242237798|ref|YP_002985979.1| ribulose-phosphate 3-epimerase [Dickeya dadantii Ech703]
gi|242129855|gb|ACS84157.1| ribulose-phosphate 3-epimerase [Dickeya dadantii Ech703]
Length = 225
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 103/222 (46%), Positives = 140/222 (63%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLGE+ KAGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MKP-FLIAPSILSADFARLGEDTEKALKAGADVVHFDVMDNHYVPNLTIGPLVLKSLRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPE+S H+ R+L+ I G K G+ NP
Sbjct: 60 GITAPVDVHLMVKPVDRLIPDFAQAGANFITFHPEASEHVDRTLQLIRDNGCKAGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP++ L+ V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + I I LEVDGG
Sbjct: 120 ATPLSYLDYVMDKLDIILLMSVNPGFGGQSFIPATLDKLRQVRRRIDDGGYDIHLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKK 218
V NI + AGAD+ V GS+ F Q + R+ +L K
Sbjct: 180 VKVDNIADIAAAGADMFVAGSAIFGQPDYQAVIARMRQELAK 221
>gi|78777802|ref|YP_394117.1| ribulose-phosphate 3-epimerase [Sulfurimonas denitrificans DSM
1251]
gi|78498342|gb|ABB44882.1| ribulose-5-phosphate 3-epimerase [Sulfurimonas denitrificans DSM
1251]
Length = 213
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADF L ++ I AG +H DVMDG FVPN++ G V+ ++ + +
Sbjct: 1 MKVAPSILSADFGNLQRDVEAICAAGCDYVHVDVMDGHFVPNLTIGPVVVSAIAACATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A + I+FH E H R ++ I ++G K + +NP TP
Sbjct: 61 LDIHLMVENNTFFVDLFAPLKPEYISFHIEEEKHPHRLIQKIRSLGIKPAIVLNPHTPPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+E ++ ++DM+L+M+VNPGFGGQ IES +PK ++ A+ + +EVDGGV+ +N
Sbjct: 121 AIEYLLADLDMVLLMSVNPGFGGQSFIESVVPKAKKLSAMRDEINPKCLIEVDGGVSDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+K L + G D++V GS FN + + + + L
Sbjct: 181 VKLLKEVGVDIVVAGSYVFNHENKKTAIESLK 212
>gi|227510462|ref|ZP_03940511.1| ribulose-phosphate 3-epimerase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190114|gb|EEI70181.1| ribulose-phosphate 3-epimerase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 217
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+AD+ L +I + K GA+ +H D+MDG FVP +S+G +++++ ++
Sbjct: 2 IKIAPSILSADYVNLQRDIEKVDKGGAELLHIDIMDGAFVPALSYGPGWVKAIKPITNLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + + +I+ ADAG DII H E++PHI R+L+ I K V INP TPV+
Sbjct: 62 LDVHMMVQNPERYIDDFADAGADIIGVHTEATPHIHRALQMIKNRNVKAEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ+ + T+ KI + + ++ + +E+DGGV
Sbjct: 122 AITPVLYMVDQVLVMTVNPGFGGQKFLPETVKKIAELDKIKKEQGLNFDIEIDGGVNETT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS F+ +S K L D
Sbjct: 182 VVGAYKAGATVAVAGSYIFDADDPVSKIKALKD 214
>gi|78484609|ref|YP_390534.1| ribulose-phosphate 3-epimerase [Thiomicrospira crunogena XCL-2]
gi|78362895|gb|ABB40860.1| ribulose-5-phosphate 3-epimerase [Thiomicrospira crunogena XCL-2]
Length = 234
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 97/228 (42%), Positives = 133/228 (58%), Gaps = 11/228 (4%)
Query: 1 MTPSIQ-IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS--- 56
M I PSIL+ADF++LG ++ ++ AGA +HFDVMD +VPN++ G V S
Sbjct: 1 MAKKENWIAPSILSADFAQLGTDVKDVIAAGADVVHFDVMDNHYVPNLTIGPLVCESLKN 60
Query: 57 --LRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
++ + D HLM+ +D I A AG DIITFHPE+S HI RSL+ I A G + G
Sbjct: 61 FMVKEDVKAPIDVHLMVKPVDRLIGDFASAGADIITFHPEASEHIDRSLQLIKAEGCQAG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP T ++ LE V+D+IDMILIM+VNPGFGGQ I + K++ A+ +I + R I L
Sbjct: 121 LVFNPGTSLSYLEHVMDKIDMILIMSVNPGFGGQAFIPQALEKLKAARKMIDESGRDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFN---QKGEISYAKRLNDLK 217
E+DGGV NI + AG D V GS F Y + ++
Sbjct: 181 EIDGGVKVENIAEVAAAGCDTFVSGSGIFGKASASDANRYDTVIQQMR 228
>gi|305433006|ref|ZP_07402162.1| ribulose-phosphate 3-epimerase [Campylobacter coli JV20]
gi|304443707|gb|EFM36364.1| ribulose-phosphate 3-epimerase [Campylobacter coli JV20]
Length = 215
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EEI I +AGA +H DVMDG FVPN++FG VI + + ++
Sbjct: 1 MYVAPSLLSANFLKLEEEIKAIDEAGADLLHIDVMDGHFVPNLTFGPCVIEKISTITEIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ I+FH ES H R I + G + +NP TP+
Sbjct: 61 LDVHLMVKDVGKFVDLFIPIKPKFISFHIESEAHPIRLCEYIRSQGIHPAIVLNPHTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +ID +DM+L+M+VNPGFGGQ+ + KI++ + LI +++ +EVDGGV N
Sbjct: 121 SIKHMIDFVDMVLLMSVNPGFGGQKFLPLVYDKIKELRRLIDEKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AGAD+LV GS F+ Y ++ LK
Sbjct: 181 ASDLEAAGADILVAGSYIFSSND---YKTSISSLK 212
>gi|269127207|ref|YP_003300577.1| ribulose-phosphate 3-epimerase [Thermomonospora curvata DSM 43183]
gi|268312165|gb|ACY98539.1| ribulose-phosphate 3-epimerase [Thermomonospora curvata DSM 43183]
Length = 221
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 90/221 (40%), Positives = 135/221 (61%), Gaps = 3/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RL EE++ I+ A +H DVMD FVPN++ G V+ SL +S
Sbjct: 2 AAKIFPSILSADFARLAEEVALISD-DADWVHVDVMDNHFVPNLTLGLPVVESLVKHSAL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E++ R+LR I A G + G+ INP TP+
Sbjct: 61 PLDCHLMIEDPDRWAPAYAEVGAGSVTIHAEAAKAPIRTLRAIRAAGARAGLGINPATPL 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
E+++ EIDM+L+MTV PGFGGQ+ ++ +PK+R+A+ LI R + L+VDGGV++
Sbjct: 121 EPYEELLGEIDMLLLMTVEPGFGGQKFLDLVLPKVRRARQLIKSRDLAVWLQVDGGVSAE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD+ V G++ + + L ++A A
Sbjct: 181 TIERCAEAGADVFVAGNAVYGADDPAEAVRLLRAKAEAAGA 221
>gi|71002346|ref|XP_755854.1| ribulose-phosphate 3-epimerase [Aspergillus fumigatus Af293]
gi|66853492|gb|EAL93816.1| ribulose-phosphate 3-epimerase [Aspergillus fumigatus Af293]
gi|159129911|gb|EDP55025.1| ribulose-phosphate 3-epimerase [Aspergillus fumigatus A1163]
Length = 313
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 87/246 (35%), Positives = 131/246 (53%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 62 MSPPAIIAPSILSADFAVLGNECSTKIAQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 121
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI + AGCD+ FH E++
Sbjct: 122 VDRPTQALGKGTFDCHMMIMEPHKWVKEFKSAGCDLYCFHYEAAISSVAAMTPEDKETSR 181
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 182 LTSPKELIRYIHDEGMQAGIAIKPDTPVDVLWDILENKDEKERPDMVLVMTVHPGFGGQK 241
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ + +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 242 FMASELPKVKALRERY--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAQDPADV 299
Query: 210 AKRLND 215
+L +
Sbjct: 300 IAKLRE 305
>gi|215430295|ref|ZP_03428214.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis EAS054]
gi|289753490|ref|ZP_06512868.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
EAS054]
gi|289694077|gb|EFD61506.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
EAS054]
Length = 233
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 14 IAPSILAADFARLADEAAAV--NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 72 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
D++ D +L+M+V PGFGGQ+ I + K+R + ++ + +I +E+DGG+ I+
Sbjct: 132 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 191
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ + + L +A
Sbjct: 192 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAA 227
>gi|72025733|ref|XP_792810.1| PREDICTED: similar to LOC494647 protein [Strongylocentrotus
purpuratus]
gi|115939134|ref|XP_001195815.1| PREDICTED: similar to LOC494647 protein [Strongylocentrotus
purpuratus]
Length = 230
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 128/212 (60%), Gaps = 3/212 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
+I PSIL +D S L +E + +GA +H DVMDG FVPN++FG V++ LR ++
Sbjct: 7 ECKIGPSILNSDLSALADECHRMMDSGADYLHLDVMDGHFVPNLTFGHPVVKCLREKVTN 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ FD H+M+ S + I ++ AG + TFH E++ + +R I G K G+A+ P TP
Sbjct: 67 AFFDMHMMVLSPEKWIEPMSSAGANQYTFHVEATDDPKMVIRHIKEAGMKVGIAMKPGTP 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++ ++E++M+L+MTV PGFGGQ+ + + K+++ + + +S+ +EVDGGV
Sbjct: 127 IDVVLPYVEEVNMVLVMTVEPGFGGQKFMGDMMTKVKKLREMY--KSLDIEVDGGVGLST 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I ++ +AGA+++V GS+ + L
Sbjct: 185 IDAVAEAGANMIVSGSAIMKSDNPKQVIQSLR 216
>gi|152966924|ref|YP_001362708.1| ribulose-phosphate 3-epimerase [Kineococcus radiotolerans SRS30216]
gi|151361441|gb|ABS04444.1| Ribulose-phosphate 3-epimerase [Kineococcus radiotolerans SRS30216]
Length = 221
Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 89/220 (40%), Positives = 133/220 (60%), Gaps = 2/220 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S+Q+ PSIL+ADF+ L E+ I + A H DVMDG FVPN++ G ++ +L+
Sbjct: 1 MSRSVQVNPSILSADFANLEAELRRI--STADAAHVDVMDGHFVPNLTLGLPIVEALQRV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S DCHLMI + D A+AG +TFH E++ + R I A G + G+A+ P
Sbjct: 59 SPIPLDCHLMIEAPDRWAPAYAEAGAAGVTFHAEAAMAPVKLAREIRAAGGRAGIALRPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ D++ E DM+L+MTV PGFGGQ ++ T+PKI +A+A IG + L+VDGGV++
Sbjct: 119 TPLEPFVDLLAEFDMLLVMTVEPGFGGQSFLDVTLPKIARARAAIGDLDVRLQVDGGVSA 178
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ + + + L +L A
Sbjct: 179 STIERAAEAGADVFVAGSAVYGAEDAAAAIGTLRELAAGA 218
>gi|218886079|ref|YP_002435400.1| ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757033|gb|ACL07932.1| Ribulose-phosphate 3-epimerase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 219
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 150/221 (67%), Gaps = 5/221 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L++DF RL +E++ + AG +H+DVMDG FVPNI++G VI LR S
Sbjct: 1 MILSPSLLSSDFGRLADELAALEAAGLSWVHWDVMDGTFVPNITYGQPVIAHLRKQSRLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ + +++ DAG D++ H E++PH++R+L I +G K+GVA+NP TP++
Sbjct: 61 FDVHLMVERPERYLHEFVDAGADMLVVHAEATPHVQRALAEIRRLGVKSGVALNPHTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L+ V+D+ DM+LIMTVNPGFGGQ + ++ KI + +A+I R +S ++VDGGV N
Sbjct: 121 VLDYVLDDADMVLIMTVNPGFGGQSFLPASYRKISELRAMINARGLSTLIQVDGGVDPSN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
LVQ+GAD+LV GS+FF YA+RL + +A ++
Sbjct: 181 TAKLVQSGADVLVSGSAFFKFP---PYAERLKAFEAAANSV 218
>gi|284991538|ref|YP_003410092.1| ribulose-phosphate 3-epimerase [Geodermatophilus obscurus DSM
43160]
gi|284064783|gb|ADB75721.1| ribulose-phosphate 3-epimerase [Geodermatophilus obscurus DSM
43160]
Length = 224
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S I PS+L+ADF+RL EE + A A +HFDVMD FVPN++FG V++++++
Sbjct: 1 MSRSPLIAPSLLSADFARLAEESQRV--ADADWLHFDVMDAHFVPNLTFGLPVMQAVQAV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINP 119
S DCHLMI A+AG +T H E+ R R + A G G+A+ P
Sbjct: 59 SPVPLDCHLMIEDPARWAPGYAEAGARNVTVHAEACTDDPRAVARDLRAAGSLAGLALKP 118
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
TP+ DV+ E D +L+MTV PGFGGQ+ + T+PK+R+A+ L+ ++ +EVDGG
Sbjct: 119 GTPLEEYLDVLPEFDTLLVMTVEPGFGGQRFLAETLPKVRRARELVDTGHLTLLVEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ + I+ AGAD+ V GS+ +
Sbjct: 179 INADTIEQAAAAGADVFVAGSAVYGADDPARAI 211
>gi|225717624|gb|ACO14658.1| Ribulose-phosphate 3-epimerase [Caligus clemensi]
Length = 227
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 129/218 (59%), Gaps = 5/218 (2%)
Query: 1 MTPSI--QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+ ++ +I PSIL AD LG E + GA +H DVMDG FVPN++FGA V++ LR
Sbjct: 1 MSKTLIPKIGPSILNADLCNLGTESQCLLDHGADYLHLDVMDGHFVPNLTFGAPVVKCLR 60
Query: 59 SYSD-SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
S ++FD H+M+ + + ++DAG D TFH E++ R I G K G+ +
Sbjct: 61 SKVKEAMFDMHMMVQDPEKWVEDMSDAGADQYTFHIEATKEPLDLCRKIREAGMKVGIGL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P+TPV+ +E+ I+ DMIL+MTV PGFGGQ+ +E + K+ ++ ++ +EVDGG
Sbjct: 121 KPKTPVSAVEEYIESADMILVMTVEPGFGGQKFMEDMMEKVSYLRSQY--PTLDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + I+ + +AGA+++V G++ + K L
Sbjct: 179 IGPKTIRQVAKAGANMIVSGTAVIKSTDPGAVIKDLRS 216
>gi|302926303|ref|XP_003054268.1| hypothetical protein NECHADRAFT_74815 [Nectria haematococca mpVI
77-13-4]
gi|256735209|gb|EEU48555.1| hypothetical protein NECHADRAFT_74815 [Nectria haematococca mpVI
77-13-4]
Length = 313
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 85/248 (34%), Positives = 134/248 (54%), Gaps = 34/248 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF++ G + + + GA +H D+MDG FVPNI+FG V+ S+R +
Sbjct: 1 MAPKTIIAPSILSADFAQFGHDCARTMEQGADWLHVDIMDGHFVPNITFGPPVVASIRGH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------P 97
D FDCH+MI+ + AGC++ FH E++
Sbjct: 61 VDQPTEALGRGTFDCHMMIAEPKKWVKEFKKAGCNLYCFHYEAAFSSDAESPEQKTDDKT 120
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI------DMILIMTVNPGFGGQQLI 151
+ + +R IH G G+AI P+T V +L ++++ DM+LIMTV PGFGGQ+ +
Sbjct: 121 NPKALIRYIHDNGLLAGIAIKPDTSVDVLWEILENAKEQERPDMVLIMTVYPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
S +PK++ + + +++EVDGG+ I AGA+++V GS+ F K +
Sbjct: 181 ASELPKVQALREKYPE--LNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAKDPS---E 235
Query: 212 RLNDLKKS 219
++ L+KS
Sbjct: 236 VISLLRKS 243
>gi|313634772|gb|EFS01210.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
gi|313639386|gb|EFS04264.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL S4-171]
Length = 213
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D++D IL+MTVNPG GGQ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDLDCILLMTVNPGLGGQTFFQSSLEKIRKTKAYIGDRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AGADL+VVGS F E L +L K
Sbjct: 183 CTLAGADLIVVGSYLF----EGDIEANLAELAK 211
>gi|259047431|ref|ZP_05737832.1| ribulose-phosphate 3-epimerase [Granulicatella adiacens ATCC 49175]
gi|259035622|gb|EEW36877.1| ribulose-phosphate 3-epimerase [Granulicatella adiacens ATCC 49175]
Length = 235
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++++ PSIL+A+F+ LGE++ + K GA IH D MDG FVPN++ G +++ LR +D
Sbjct: 21 NMKVAPSILSANFATLGEDVKKVEKLGADWIHIDAMDGQFVPNLTLGPNIVEGLRPVTDL 80
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V DCHLM+ + + I A AG D I+ H E++PHI R+L+ I A G K GV INP TPV
Sbjct: 81 VLDCHLMVQNPERFIPQFAKAGADYISVHVEATPHIHRALQAIKAEGVKAGVVINPGTPV 140
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ + V+ E+D++L+MTVNPGFGGQ I T+ K+R+ AL ++ +EVDGGV
Sbjct: 141 SAISAVLSEVDLVLVMTVNPGFGGQSFIPETLDKVRELVALREEKGYHYLIEVDGGVNGE 200
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AG D+ V GS + + + +
Sbjct: 201 TAKLCAAAGVDVAVAGSYVYYADDIKAAIDSIKE 234
>gi|238921468|ref|YP_002934983.1| ribulose-phosphate 3-epimerase, [Edwardsiella ictaluri 93-146]
gi|238871037|gb|ACR70748.1| ribulose-phosphate 3-epimerase, putative [Edwardsiella ictaluri
93-146]
Length = 225
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGE+ + + AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 1 MNPYL-IAPSILSADFARLGEDTAKVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALREY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I ADAG IITFHPE+S H+ R+L+ I A G K G+ +NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFADAGASIITFHPEASDHVDRTLQLIRACGCKAGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
TP++ L+ V+D +D IL+M+VNPGFGGQ I ST+ K+RQ + I + + EVDGG
Sbjct: 120 ATPLSCLDYVMDRLDTILLMSVNPGFGGQSFIPSTLDKLRQVRQRIDASGLDIRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
V NI ++ AGAD+ V GS+ F YA + D++
Sbjct: 180 VKVDNIGAIAAAGADMFVAGSAIFGH---ADYAAVITDMR 216
>gi|326331205|ref|ZP_08197499.1| ribulose-phosphate 3-epimerase [Nocardioidaceae bacterium Broad-1]
gi|325950975|gb|EGD43021.1| ribulose-phosphate 3-epimerase [Nocardioidaceae bacterium Broad-1]
Length = 222
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL ADF+ LG E++ I A IH DVMD FVPN++FG ++ ++ +
Sbjct: 4 IQITPSILNADFAALGAEVARIPS--ADWIHVDVMDNHFVPNLTFGPTMVEAIARSTSVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +AGC +TFH E++ R R I A G + +A+ P TP+
Sbjct: 62 LDAHLMIENADREAPAYVEAGCGSVTFHVEATKAPVRLAREIRAKGARASMALKPATPIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
ED++ E+DM+L+MTV PGFGGQ+ ++ +PKIR+A++++ K + L+VDGGV+
Sbjct: 122 PYEDMLAELDMVLLMTVEPGFGGQKFLDLVLPKIRRARSMMDKHGVETWLQVDGGVSLET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ ++ L D SA
Sbjct: 182 IERCAEAGADVFVAGSAVYSADDPDVMVNALRDKAVSA 219
>gi|325295095|ref|YP_004281609.1| ribulose-phosphate 3-epimerase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065543|gb|ADY73550.1| ribulose-phosphate 3-epimerase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 222
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 130/200 (65%), Gaps = 2/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+A+F+ L +I + GA +H DVMDG FVPNI+ G V+ S++ + D
Sbjct: 4 LAPSILSANFANLERDIKEVELGGADLLHIDVMDGRFVPNITIGIPVVESIKDVTKLPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I A AG D I+FH E++ H R + I + KK G+ INP TPV +L
Sbjct: 64 VHLMIVEPEKYILDFAKAGADWISFHFEAAVHHHRIVSMIKELDKKAGIVINPSTPVFLL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
E+++ +D +L+M+VNPGFGGQ+ IE+++ KI++ K + ++ + +EVDGG+ N++
Sbjct: 124 EEILPFVDFVLVMSVNPGFGGQKFIETSVEKIKKLKRICEEKGLEVKIEVDGGIKIDNVQ 183
Query: 185 SLVQAGADLLVVGSSFFNQK 204
++QAGA ++V GS+ FN
Sbjct: 184 RVLQAGASIVVAGSAVFNGN 203
>gi|15840866|ref|NP_335903.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis CDC1551]
gi|167968447|ref|ZP_02550724.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Ra]
gi|215403255|ref|ZP_03415436.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis 02_1987]
gi|215411053|ref|ZP_03419861.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis
94_M4241A]
gi|215426745|ref|ZP_03424664.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T92]
gi|215445595|ref|ZP_03432347.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T85]
gi|218753117|ref|ZP_03531913.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis GM 1503]
gi|219557311|ref|ZP_03536387.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T17]
gi|254231650|ref|ZP_04924977.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis C]
gi|254364291|ref|ZP_04980337.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis str.
Haarlem]
gi|260204673|ref|ZP_05772164.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis K85]
gi|294994970|ref|ZP_06800661.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis 210]
gi|297633964|ref|ZP_06951744.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis KZN
4207]
gi|297730953|ref|ZP_06960071.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis KZN
R506]
gi|306780739|ref|ZP_07419076.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu002]
gi|306784138|ref|ZP_07422460.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu003]
gi|306788508|ref|ZP_07426830.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu004]
gi|306792831|ref|ZP_07431133.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu005]
gi|306797230|ref|ZP_07435532.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu006]
gi|306807308|ref|ZP_07443976.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu007]
gi|306971699|ref|ZP_07484360.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu010]
gi|307083977|ref|ZP_07493090.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis SUMu012]
gi|308231833|ref|ZP_07663945.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu001]
gi|308376712|ref|ZP_07668329.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu008]
gi|308380067|ref|ZP_07669112.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu011]
gi|313658286|ref|ZP_07815166.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis KZN
V2475]
gi|54039256|sp|P65761|RPE_MYCBO RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|54041952|sp|P65760|RPE_MYCTU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|13881066|gb|AAK45717.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis CDC1551]
gi|124600709|gb|EAY59719.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis C]
gi|134149805|gb|EBA41850.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis str.
Haarlem]
gi|308215902|gb|EFO75301.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu001]
gi|308326398|gb|EFP15249.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu002]
gi|308331084|gb|EFP19935.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu003]
gi|308334897|gb|EFP23748.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu004]
gi|308338706|gb|EFP27557.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu005]
gi|308342393|gb|EFP31244.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu006]
gi|308346231|gb|EFP35082.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu007]
gi|308350183|gb|EFP39034.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu008]
gi|308358775|gb|EFP47626.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu010]
gi|308362712|gb|EFP51563.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
SUMu011]
gi|308366379|gb|EFP55230.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis SUMu012]
Length = 229
Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 10 IAPSILAADFARLADEAAAV--NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 68 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
D++ D +L+M+V PGFGGQ+ I + K+R + ++ + +I +E+DGG+ I+
Sbjct: 128 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ + + L +A
Sbjct: 188 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAA 223
>gi|314933397|ref|ZP_07840762.1| ribulose-phosphate 3-epimerase [Staphylococcus caprae C87]
gi|313653547|gb|EFS17304.1| ribulose-phosphate 3-epimerase [Staphylococcus caprae C87]
Length = 214
Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 135/215 (62%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++++PS+L+ DF L EE+ ++ KA +HFDVMDG FVPNIS G ++ ++RSYS
Sbjct: 2 VKVLPSLLSVDFLNLKEELDHLEKANVDGLHFDVMDGKFVPNISIGIPLLDAVRSYSKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I++ A+ G D+I+ H E++PHI R++ I KK GV INP TPV
Sbjct: 62 IDVHLMIEQPENYIHLFAEHGADMISVHVEATPHIHRAIEEIKLHKKKAGVVINPGTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ I+ I KI Q + + ++ +EVDGG+
Sbjct: 122 SILPVLSIVDYVLVMTVNPGFGGQSFIDQCINKIEQLNQIKHENNLTFDIEVDGGINDST 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K V+ GA +LV GS FF Q YAK N LK
Sbjct: 182 SKYCVEQGATMLVTGSYFFKQDD---YAKVTNALK 213
>gi|86151749|ref|ZP_01069963.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315123998|ref|YP_004066002.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841378|gb|EAQ58626.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315017720|gb|ADT65813.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 215
Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EE+ I AGA +H DVMDG FVPN++FG VI + + S
Sbjct: 1 MYVAPSLLSANFLKLEEEVKAIEVAGADLLHIDVMDGHFVPNLTFGPCVIEKISTISKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I++ I+FH ES H R I + G + +NP T +
Sbjct: 61 LDVHLMVKDVSKFIDLFIPLKPKFISFHIESEVHPIRLCEYIRSQGIHPAIVLNPHTSID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ +EVDGGV N
Sbjct: 121 SIKHMLEFVDMVLLMSVNPGFGGQKFLPLVHEKIKELRQMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L ++GAD+LV GS F+ + L
Sbjct: 181 ASDLEESGADILVAGSYIFSSNDYKTAISSLK 212
>gi|320170901|gb|EFW47800.1| ribulose-5-phosphate-3-epimerase [Capsaspora owczarzaki ATCC 30864]
Length = 230
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 129/213 (60%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+LA+D S L E + AGA +H DVMDG FVPNI+ GA VI+ LR +S +
Sbjct: 7 NCRIGPSVLASDMSCLASETQRVVDAGADYVHLDVMDGHFVPNITMGAPVIKCLRKHSKA 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H+M+S + ++ +ADAG D TFH ES+ +R I A K GVAI P TP
Sbjct: 67 FFDLHMMVSKPEQWVDDMADAGGDQFTFHLESTADPMALIRQIRAKNMKVGVAIKPNTPA 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRN 182
+E ++ +DM+L+MTV PGFGGQ+ + +PK+ + + + +EVDGGV
Sbjct: 127 ESVEYLVPHVDMVLVMTVEPGFGGQKFMAHMMPKVEHLRTKFPE--MDIEVDGGVGVGAT 184
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA+++V GSS +N + ++L +
Sbjct: 185 IDACAKAGANMIVAGSSVYNAADPAAVIRQLRE 217
>gi|15608546|ref|NP_215924.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Rv]
gi|31792602|ref|NP_855095.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis AF2122/97]
gi|121637338|ref|YP_977561.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148661199|ref|YP_001282722.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Ra]
gi|148822628|ref|YP_001287382.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis F11]
gi|224989813|ref|YP_002644500.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799542|ref|YP_003032543.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
1435]
gi|254550422|ref|ZP_05140869.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186347|ref|ZP_05763821.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis CPHL_A]
gi|260200463|ref|ZP_05767954.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T46]
gi|289442853|ref|ZP_06432597.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T46]
gi|289447004|ref|ZP_06436748.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
CPHL_A]
gi|289554801|ref|ZP_06444011.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
605]
gi|289569425|ref|ZP_06449652.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T17]
gi|289574077|ref|ZP_06454304.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis K85]
gi|289745159|ref|ZP_06504537.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis 02_1987]
gi|289749966|ref|ZP_06509344.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T92]
gi|289757514|ref|ZP_06516892.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T85]
gi|289761567|ref|ZP_06520945.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis GM
1503]
gi|298524914|ref|ZP_07012323.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
94_M4241A]
gi|1542916|emb|CAB02187.1| PROBABLE RIBULOSE-PHOSPHATE 3-EPIMERASE RPE (PPE) (R5P3E)
(Pentose-5-phosphate 3-epimerase) [Mycobacterium
tuberculosis H37Rv]
gi|31618191|emb|CAD94304.1| PROBABLE RIBULOSE-PHOSPHATE 3-EPIMERASE RPE (PPE) (R5P3E)
(Pentose-5-phosphate 3-epimerase) [Mycobacterium bovis
AF2122/97]
gi|121492985|emb|CAL71456.1| Probable ribulose-phosphate 3-epimerase rpe [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148505351|gb|ABQ73160.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis H37Ra]
gi|148721155|gb|ABR05780.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis F11]
gi|224772926|dbj|BAH25732.1| ribulose-phosphate 3-epimerase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321045|gb|ACT25648.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
1435]
gi|289415772|gb|EFD13012.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis T46]
gi|289419962|gb|EFD17163.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
CPHL_A]
gi|289439433|gb|EFD21926.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
605]
gi|289538508|gb|EFD43086.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis K85]
gi|289543179|gb|EFD46827.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T17]
gi|289685687|gb|EFD53175.1| ribulose-phosphate 3-epimerase [Mycobacterium tuberculosis 02_1987]
gi|289690553|gb|EFD57982.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T92]
gi|289709073|gb|EFD73089.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis GM
1503]
gi|289713078|gb|EFD77090.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis T85]
gi|298494708|gb|EFI30002.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
94_M4241A]
gi|326903029|gb|EGE49962.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
W-148]
gi|328459290|gb|AEB04713.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis KZN
4207]
Length = 232
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 13 IAPSILAADFARLADEAAAV--NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
CHLMI + D A+AG +TFH E++ + R I A G K G+++ P TP+
Sbjct: 71 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPY 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
D++ D +L+M+V PGFGGQ+ I + K+R + ++ + +I +E+DGG+ I+
Sbjct: 131 LDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEIDGGINDDTIE 190
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ + + L +A
Sbjct: 191 QAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAA 226
>gi|194367497|ref|YP_002030107.1| ribulose-phosphate 3-epimerase [Stenotrophomonas maltophilia
R551-3]
gi|194350301|gb|ACF53424.1| Ribulose-phosphate 3-epimerase [Stenotrophomonas maltophilia
R551-3]
Length = 224
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 144/225 (64%), Gaps = 5/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+A+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 1 MSNCLIAPSILSANFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A+AG I+FHPE+S H+ R+++ I ++G K G+ +NP
Sbjct: 61 VTAPIDVHLMVEPVDRIIPDFAEAGATYISFHPEASRHVHRTIQLIRSLGCKPGIVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV IL+ V+D++D++L+M+VNPGFGGQ I S + K+R + I R I LE+DGGV
Sbjct: 121 TPVDILDWVLDDLDLVLLMSVNPGFGGQAFIPSALDKLRVVRKKIDASGRDIRLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ NI + AGAD V GS+ FN K SY + ++ + A
Sbjct: 181 KADNIGEIAAAGADTFVAGSAIFNAK--TSYQDVIAQMRANVAAA 223
>gi|260222538|emb|CBA32200.1| Ribulose-phosphate 3-epimerase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 225
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 141/219 (64%), Gaps = 8/219 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG + +L+ ++ +
Sbjct: 2 TYRIAPSILSADFARLGEEVKNVIAAGADWIHFDVMDNHYVPNLTFGPMICSALKPHAKT 61
Query: 64 ------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D HLMIS +D+ A+AG D I+FHP++S H+ RS++ I + G K G+
Sbjct: 62 AEGVAVPIDVHLMISPVDALAASFAEAGADYISFHPDASGHVHRSVQAIKSKGVKAGLVF 121
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVD 175
NP P+ +L+ VID+ID+ILIM+VNPGFGGQ I+S + KI A+ I + I LEVD
Sbjct: 122 NPAEPLDVLDWVIDDIDLILIMSVNPGFGGQSFIDSALRKIEAARKRIDASGKDIRLEVD 181
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
GG+ + NI+ + AGAD V GS+ F + S +
Sbjct: 182 GGIKTDNIRRVADAGADTFVAGSAIFGKPDYQSVVDAMR 220
>gi|241763216|ref|ZP_04761274.1| Ribulose-phosphate 3-epimerase [Acidovorax delafieldii 2AN]
gi|241367606|gb|EER61883.1| Ribulose-phosphate 3-epimerase [Acidovorax delafieldii 2AN]
Length = 227
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 143/222 (64%), Gaps = 8/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++FG V ++L+ +
Sbjct: 1 MSRTFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTFGPMVCQALKPH 60
Query: 61 SDSV------FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLMI +D+ ADAG D I+FHP++S H+ RS++ I A G K G
Sbjct: 61 AKTPAGVPVPVDVHLMIQPVDALAAAFADAGADYISFHPDASGHVHRSIQAIRAKGVKPG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISL 172
+ NP P+ +L+ VI++ID+ILIM+VNPGFGGQ I+S + KI + I + I L
Sbjct: 121 LVFNPAEPLDVLDWVIEDIDLILIMSVNPGFGGQSFIDSALRKIESVRKRIDACGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
EVDGGV + NI+ + AGAD V GS+ F + S K +
Sbjct: 181 EVDGGVKADNIRRVADAGADTFVAGSAIFGKPDYASVIKAMR 222
>gi|328955505|ref|YP_004372838.1| ribulose-5-phosphate 3-epimerase [Coriobacterium glomerans PW2]
gi|328455829|gb|AEB07023.1| ribulose-5-phosphate 3-epimerase [Coriobacterium glomerans PW2]
Length = 226
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 93/225 (41%), Positives = 139/225 (61%), Gaps = 4/225 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PSILAAD + LG E++ I AGA IH DVMDG F N+SFG ++ + +
Sbjct: 1 MREEISIAPSILAADITALGTELARI--AGADLIHIDVMDGHFTENLSFGPAIVAACKRD 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D H+M+++ D I+ ADAG D+I+ H E++ H+ R + + G + GV +NP
Sbjct: 59 CSIPLDVHMMVTNPDETIDWYADAGADMISVHVEAATHLHRIVHRLRDRGVRAGVTLNPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV+ LE +I+++D +L+M+V+PGFGGQ IE T K+RQ L R ++ +EVDGG+
Sbjct: 119 TPVSALESIIEDVDAVLVMSVDPGFGGQSFIEGTYAKLRQLSDLCAHRRVNPAIEVDGGI 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++ N++ +V AGAD LV GS+ F + + L +L LA+
Sbjct: 179 SAANVEQVVAAGADTLVAGSAVFGAADPSAEMELLRELATRGLAL 223
>gi|91202752|emb|CAJ72391.1| strongly similar to D-ribulose-5-phosphate 3-epimerase [Candidatus
Kuenenia stuttgartiensis]
Length = 232
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 3/226 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I SILAA+ R EEI I AG IH DVMDG FVPNI+ G ++ +R
Sbjct: 1 MRNKIKISASILAANPMRFEEEIKRIEAAGIDLIHIDVMDGHFVPNITIGPFIVAGIRRI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
++ D HLMI + ++ A A G IITFH E+ + + + I + G K G+++N
Sbjct: 61 TNIPLDIHLMIEHPERYVEAFAGAAEGNGIITFHIETVKNPKEIISLIKSTGMKVGISLN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TPV ++E+ +D++DM L+M+VNPGF GQ+ I +PKI + + + + ++VDGG+
Sbjct: 121 PGTPVEMIENFLDQVDMALVMSVNPGFAGQKFIPIALPKIARLRDKAPDK-MDIQVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
T NI +V+ GA+++V S+ F + K L + + + D
Sbjct: 180 TPDNISQVVKQGANVIVAASAIFKTSDPGNAIKSLKQIAEQTMEKD 225
>gi|284800780|ref|YP_003412645.1| hypothetical protein LM5578_0528 [Listeria monocytogenes 08-5578]
gi|284993966|ref|YP_003415734.1| hypothetical protein LM5923_0527 [Listeria monocytogenes 08-5923]
gi|284056342|gb|ADB67283.1| hypothetical protein LM5578_0528 [Listeria monocytogenes 08-5578]
gi|284059433|gb|ADB70372.1| hypothetical protein LM5923_0527 [Listeria monocytogenes 08-5923]
Length = 216
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 134/217 (61%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F E L L K L
Sbjct: 183 CTLAGADLIVVGSYLF----EGDIEANLEKLAKGVLT 215
>gi|254362201|ref|ZP_04978316.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica PHL213]
gi|153093773|gb|EDN74712.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica PHL213]
Length = 225
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 146/223 (65%), Gaps = 5/223 (2%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ I PSIL+AD +RLG++++ + KAGA IHFDVMD +VPN++FG + ++LR
Sbjct: 1 MSKNPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHYVPNLTFGPAICKALRD 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
Y D HLM+ ++ I A AG D ITFHPE++ HI R+L+ I +G K+G+ N
Sbjct: 61 YGIQCPIDVHLMVKPVERLIPDFAKAGADYITFHPEATEHIDRNLQLIRDLGCKSGLVFN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDG 176
P TP++ L+ V+D++D++L+M+VNPGFGGQ I ST+ K+++ + I + ++ EVDG
Sbjct: 121 PATPLSYLDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKLKEVRRRIDESGYNIRLEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND-LKK 218
GV NI + AGAD+ V GS+ F+Q + ++ D L+K
Sbjct: 181 GVKINNIADIAAAGADMFVAGSAIFDQPDYQAVIAQMRDELRK 223
>gi|269795117|ref|YP_003314572.1| ribulose-5-phosphate 3-epimerase [Sanguibacter keddieii DSM 10542]
gi|269097302|gb|ACZ21738.1| ribulose-5-phosphate 3-epimerase [Sanguibacter keddieii DSM 10542]
Length = 220
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF+ L ++ I + A H DVMD FVPN++ G ++ + S D
Sbjct: 5 VSPSILSADFTNLERDLQAI--STADYAHVDVMDNHFVPNLTLGLPIVERIVQVSPVPID 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AG +TFH E++ R R + +G + G+A+ P TPV
Sbjct: 63 VHLMIEDPDRWAPGFAEAGAQSVTFHAEAAAAPVRLARELRRLGARAGLALKPATPVEPY 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D++ EIDMIL+MTV PGFGGQ IE T+PKI++A+ IG+ + L+VDGG++ I
Sbjct: 123 LDLLSEIDMILVMTVEPGFGGQSFIEGTLPKIQRARRAIGEADLDVWLQVDGGISRATID 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA++ V GS+ + + L + +
Sbjct: 183 RAAEAGANVFVAGSAVYGADDIPAEIDTLRRMASA 217
>gi|283954256|ref|ZP_06371780.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
414]
gi|283794274|gb|EFC33019.1| ribulose-phosphate 3-epimerase [Campylobacter jejuni subsp. jejuni
414]
Length = 215
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 122/215 (56%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F RL EEI I AGA +H DVMDG FVPN++FG V+ + + S
Sbjct: 1 MYVAPSLLSANFLRLEEEIKAIEAAGADLLHIDVMDGHFVPNLTFGPCVVEKISTISKIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+ + +++ I+FH ES H R I G + +NP TP+
Sbjct: 61 LDVHFMVKDVSKFVDLFIPLKPKFISFHVESEVHPIRLCEYIRNQGIHPAIVLNPHTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +I+ +DM+L+M+VNPGFGGQ+ + KI++ + +I K++ +EVDGGV N
Sbjct: 121 SIKHMIEFVDMVLLMSVNPGFGGQKFLPLVYEKIKELREMIDKKNAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L AGAD+LV GS F+ Y ++ LK
Sbjct: 181 ASDLELAGADILVAGSYVFSSSN---YKTAISSLK 212
>gi|325679120|ref|ZP_08158714.1| ribulose-phosphate 3-epimerase [Ruminococcus albus 8]
gi|324109244|gb|EGC03466.1| ribulose-phosphate 3-epimerase [Ruminococcus albus 8]
Length = 237
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 128/211 (60%), Gaps = 3/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ S+L D + + EI NI KAGA +H DVMDGCFV NISFG V++ +R SD D
Sbjct: 26 VSASLLGCDLADIRSEIKNIEKAGADWLHCDVMDGCFVNNISFGTPVLKCVRKASDLPMD 85
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ +I+ A G D ITFH E++P + + IH+ GK G++I P TPV+ +
Sbjct: 86 THLMINDPIRYIDDYAGLGSDYITFHLEAAPDPQAVIDRIHSHGKFAGISIKPATPVSEV 145
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRNI 183
E + DM+L+MTV PGFGGQ+ I +T+ KI + + ++ + +EVDGG+ + +
Sbjct: 146 EPYLATADMVLVMTVVPGFGGQKFIPATLEKISEIRYMLDSMGRDKVFIEVDGGINAETV 205
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K +AGAD++V GS F + + + K L
Sbjct: 206 KFCREAGADVMVSGSYLFGAEDKSAAVKSLK 236
>gi|317486902|ref|ZP_07945712.1| ribulose-phosphate 3-epimerase [Bilophila wadsworthia 3_1_6]
gi|316921777|gb|EFV43053.1| ribulose-phosphate 3-epimerase [Bilophila wadsworthia 3_1_6]
Length = 223
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 93/221 (42%), Positives = 144/221 (65%), Gaps = 2/221 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+AD L E+S + AG + +H+DVMDG FVPNI+FG VIR LR S
Sbjct: 1 MILSPSLLSADVGNLAAELSALEAAGLRWVHWDVMDGRFVPNITFGQHVIRQLRKRSGLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +++++ AG D++ H E++ H++R+L I +G K GVA+NP TP++
Sbjct: 61 FDVHLMIVEPENYLSEFQAAGADMLVVHAEATRHLQRTLAEIRRLGMKAGVALNPATPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE V++++DMIL+M+VNPGFGGQ+ + T KIR+ + ++ +R + +++DGGVT N
Sbjct: 121 ALEYVLEDVDMILLMSVNPGFGGQKFLPITYEKIRRLRRMLDERRLETLIQIDGGVTPDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
LV+AGAD+LV GS+FF+ + + A ++
Sbjct: 181 TADLVRAGADVLVSGSAFFSVPPYEARRLAFESKAEEARSL 221
>gi|57242276|ref|ZP_00370215.1| ribulose-phosphate 3-epimerase [Campylobacter upsaliensis RM3195]
gi|57016956|gb|EAL53738.1| ribulose-phosphate 3-epimerase [Campylobacter upsaliensis RM3195]
Length = 215
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F +L EEI +++AGA +H DVMDG FV N++FG V+ + S S
Sbjct: 1 MYVAPSLLSANFLKLEEEIKAVSEAGADLLHIDVMDGHFVSNLTFGPCVLEKISSISSVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + ++FH E+ H + + G + +NP TP++
Sbjct: 61 LDVHLMVKDVSKFVELFLPLKPKFLSFHIEAEAHPIKLCEYLRTQGIHPAITLNPHTPIS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE +I+ +DM+L+M+VNPGFGGQ+ + KIR+ +ALI K+ +EVDGGV N
Sbjct: 121 SLEHLIEFVDMVLLMSVNPGFGGQKFLPLVYDKIRELRALIEKKQAKVFIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L +AGAD+LV G+ F+ + K L
Sbjct: 181 AADLEEAGADILVAGNYIFSSNDYKNAIKSLK 212
>gi|50548543|ref|XP_501741.1| YALI0C11880p [Yarrowia lipolytica]
gi|49647608|emb|CAG82051.1| YALI0C11880p [Yarrowia lipolytica]
Length = 249
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 128/213 (60%), Gaps = 5/213 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS---YSD 62
I PSIL++DF++LG + + GA +H D+MDG FVPNISFG V++ LR+ +
Sbjct: 5 IIAPSILSSDFAKLGAQSRMMVDYGADWLHVDIMDGHFVPNISFGPTVVKCLRAELLKGE 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ FDCH+M++ + +ADAG D TFH E+ ++ I A G K G+AI P T
Sbjct: 65 AFFDCHMMVTDPLRWVEPMADAGADQYTFHYEACYDHEEVIKAIKAKGMKAGIAIKPATS 124
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V ++ ++D++D++L+MTV PGFGGQ+ + +PK+ + ++++EVDGG+ +
Sbjct: 125 VEVVYPLVDQLDLVLVMTVEPGFGGQKFQQDMMPKVAALRERY--PNLNIEVDGGLGPQT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGA+++V G+S ++ K + D
Sbjct: 183 VDDAGAAGANVIVAGTSVYHSDSPPRTIKEMRD 215
>gi|159898813|ref|YP_001545060.1| ribulose-phosphate 3-epimerase [Herpetosiphon aurantiacus ATCC
23779]
gi|159891852|gb|ABX04932.1| Ribulose-phosphate 3-epimerase [Herpetosiphon aurantiacus ATCC
23779]
Length = 227
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/203 (44%), Positives = 139/203 (68%), Gaps = 2/203 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+I++ PSIL+A+F+ LG ++ + G I DVMDG FVPN++FG VI+++R +
Sbjct: 9 RAIELTPSILSANFANLGADVQAADEVGCSWIQVDVMDGHFVPNLTFGPPVIQAIRPFFK 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+S+ D+ + A AG + IT H E+S H+ R+++ IH +G GVA+NP TP
Sbjct: 69 GTLDVHLMVSNPDALLEAYAKAGANHITVHQEASVHLHRTIQRIHELGCTAGVALNPATP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V+ L+D+I+++D++LIM+VNPGFGGQ IE ++ KI ++L+ +R ++VDGGV
Sbjct: 129 VSSLDDIIEDLDLVLIMSVNPGFGGQSFIERSLAKIAAVRSLLDQRHHEAVIQVDGGVKP 188
Query: 181 RNIKSLVQAGADLLVVGSSFFNQ 203
NI S+VQAGA L+ GS+F++
Sbjct: 189 SNIASVVQAGATNLIAGSAFYSS 211
>gi|218128565|ref|ZP_03457369.1| hypothetical protein BACEGG_00135 [Bacteroides eggerthii DSM 20697]
gi|317475620|ref|ZP_07934881.1| ribulose-phosphate 3-epimerase [Bacteroides eggerthii 1_2_48FAA]
gi|217989289|gb|EEC55603.1| hypothetical protein BACEGG_00135 [Bacteroides eggerthii DSM 20697]
gi|316908190|gb|EFV29883.1| ribulose-phosphate 3-epimerase [Bacteroides eggerthii 1_2_48FAA]
Length = 216
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 128/218 (58%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+A+F+ L +I I + A +H D+MDG FVPNISFG V++ +
Sbjct: 1 MKP--IISPSILSANFAYLANDIEMINGSEAGWVHIDIMDGVFVPNISFGFPVLKYVAKL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLMI + I + G I+ H E+ PH+ R ++ I G V INP
Sbjct: 59 AEKPLDVHLMIVQPEKFIPEVKALGARIMNVHYEACPHLHRVVQQIREAGMLPAVTINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA+L D+I+++ M+L+M+VNPGFGGQ+ IE TI K+R+ + LI +EVDGGV
Sbjct: 119 TPVAMLRDIINDVYMVLVMSVNPGFGGQKFIEHTIDKVRELRELITVTGSEALIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV AGAD+LV G++ F+ + L +L
Sbjct: 179 NLETGARLVAAGADVLVAGNAIFSAPDPVEAIHALRNL 216
>gi|46200200|ref|YP_005867.1| ribulose-phosphate 3-epimerase [Thermus thermophilus HB27]
gi|55980075|ref|YP_143372.1| ribulose-phosphate 3-epimerase [Thermus thermophilus HB8]
gi|46197828|gb|AAS82240.1| ribulose-phosphate 3-epimerase [Thermus thermophilus HB27]
gi|55771488|dbj|BAD69929.1| ribulose-phosphate 3-epimerase [Thermus thermophilus HB8]
Length = 220
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 129/216 (59%), Gaps = 3/216 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P ++ PSIL AD +RLGE I AG IH DVMDG FVPN++FG ++ ++R
Sbjct: 1 MGP-VRFAPSILTADLARLGEAIREAEAAGVDWIHLDVMDGVFVPNLTFGPLLVEAVRRV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + ++ A AG D IT H E++ H R+++ + +GKK G+A+NP
Sbjct: 60 TSLPLDVHLMIVKPERYLEDFAQAGADHITVHFEATYHPHRAVQKVKELGKKAGLAVNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TP+ E ++ ++D+ L+M+VNPGFGGQ+ + + ++R+ KA+ + + + VDGG+
Sbjct: 120 TPLEAFEPLLPDLDLALLMSVNPGFGGQRYLPTATERLRRLKAMRDRLNPACLIVVDGGI 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGAD+ V GS+ FN K K L
Sbjct: 180 NRDTVAEARRAGADVAVAGSALFNDKPVAENLKALR 215
>gi|68471245|ref|XP_720399.1| hypothetical protein CaO19.7108 [Candida albicans SC5314]
gi|77022410|ref|XP_888649.1| hypothetical protein CaO19_7108 [Candida albicans SC5314]
gi|46442264|gb|EAL01555.1| hypothetical protein CaO19.7108 [Candida albicans SC5314]
gi|76573462|dbj|BAE44546.1| hypothetical protein [Candida albicans]
Length = 230
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 86/222 (38%), Positives = 122/222 (54%), Gaps = 10/222 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I I PSILAADF+ LG + G + +H DVMDG FVPNIS G +I SLR
Sbjct: 1 MVKPI-IAPSILAADFANLGCNCKRVVDTGDVEWLHLDVMDGHFVPNISLGPPIISSLRK 59
Query: 60 YSD------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
VFDCH+M+S D I IA AG D TFH E++ R ++ I G K
Sbjct: 60 QFPREGDKPIVFDCHMMVSEPDEWIEEIAKAGGDSYTFHFEATKDPARVIKKIKEHGLKA 119
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
+AI P+TPV + +++DM+L+MTV PGFGGQ+ + +PK+ + ++ ++
Sbjct: 120 AMAIKPKTPVEEVFPYAEDLDMVLVMTVEPGFGGQKFMPDMMPKVETLRE--KYPNLDVQ 177
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
VDGG+ I+ AGA+++V G+S F + + L
Sbjct: 178 VDGGLGKDTIQPAADAGANVIVAGTSVFKPEDPKPVVQYLKQ 219
>gi|309800906|ref|ZP_07695038.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium JCVIHMP022]
gi|308222442|gb|EFO78722.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium JCVIHMP022]
Length = 224
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 80/221 (36%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T +IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +
Sbjct: 3 TMTIQIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVARICQVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 61 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 121 PVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + D ++A
Sbjct: 181 PKTAHIVAEAGADVLVAGSAVYGAESPAEAIGSIRDKAEAA 221
>gi|190571232|ref|YP_001975590.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018631|ref|ZP_03334439.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357504|emb|CAQ54940.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995582|gb|EEB56222.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 224
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 136/220 (61%), Gaps = 8/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF++LGEE+ I+ IH DVMDG FVPNI+ G +VI ++R YS+
Sbjct: 3 IKIAPSILSADFAKLGEEVKRISDLNVDYIHIDVMDGNFVPNITIGPNVIYAIRKYSNLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG------KKTGVAIN 118
FD HLMI S HI +AG DIIT H E+ H+ R +R I + + G +I
Sbjct: 63 FDVHLMIKSPGDHIESFINAGADIITIHAEAEIHLERLVRKIKSYKNNTKKIIQVGASIV 122
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDG 176
P T ++LE +IDE+D++LIMTVNPGFGGQ+ I S + KI + +I R++ + VDG
Sbjct: 123 PSTSPSVLEYIIDELDIVLIMTVNPGFGGQEFIHSQLSKISTVRKMIQDRNLKTQVSVDG 182
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GV N +++AGA++LV GS+ F + L +L
Sbjct: 183 GVNFSNAADIIKAGANILVAGSAIFKAEDMKKAVNDLKNL 222
>gi|95767565|gb|ABF57316.1| ribulose-5-phosphate-3-epimerase [Bos taurus]
Length = 220
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 9 PSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDSVFD 66
PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR D FD
Sbjct: 1 PSILNSDLASLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFD 60
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+S + + +A AG + TFH E++ + ++ I G K G+AI P T V L
Sbjct: 61 MHMMVSRPEQWVKPMAVAGANQYTFHLEATDNPGALIKDIRENGMKVGLAIKPGTSVEYL 120
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV I
Sbjct: 121 APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGVGPDTIHKC 178
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA+++V GS+ + S L +
Sbjct: 179 AEAGANMIVSGSAIMRSEDPRSVINLLRN 207
>gi|288800105|ref|ZP_06405564.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333353|gb|EFC71832.1| ribulose-phosphate 3-epimerase [Prevotella sp. oral taxon 299 str.
F0039]
Length = 221
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ I PS+L+ADF L ++I I K+ A +H D+MDG FVPNISFG VI ++
Sbjct: 2 EVIISPSLLSADFINLQKDIDMINKSEADWLHLDIMDGTFVPNISFGFPVISAVAKACKK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H MI + +I A G +I+ H E+ H+ R+++ IH+ G K GVA+NP TPV
Sbjct: 62 TLDAHFMIEHPEHYIAQTAKLGVEIMCVHYEACVHLHRTIQEIHSTGMKAGVALNPSTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LED++D++D++LIM+VNPGFGGQ+ I + + K+ Q + I KR++S +EVDGGV
Sbjct: 122 SVLEDILDDLDLVLIMSVNPGFGGQKFIPNALKKVAQLRQEIDKRNLSTIIEVDGGVQGD 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N K+L+ AGA+ LV GS FN K L +
Sbjct: 182 NAKALIDAGANALVSGSYIFNSSNPEDTIKELKRI 216
>gi|167627693|ref|YP_001678193.1| ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597694|gb|ABZ87692.1| Ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 222
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 133/219 (60%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
QI PSIL+AD +RLG+++ + +AGA +HFDVMD +VPN++FG V+++LR Y
Sbjct: 1 MRKFQINPSILSADLARLGDDVQAVLEAGADNVHFDVMDNHYVPNLTFGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G G+A+NP
Sbjct: 61 ISAGMDVHLMVKPVDALIESFAKAGASSIVFHPEASEHIDRSLQLIKSFGIDAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T + L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 121 TGIDCLKYVESHIDRVLIMSVNPGFGGQKFIPAMLDKAKEVSQWIKSTGRDILLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G D V GS+ FN SY + ++ ++
Sbjct: 181 NPNNIAEIAACGVDAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|224283097|ref|ZP_03646419.1| ribulose-phosphate 3-epimerase [Bifidobacterium bifidum NCIMB
41171]
gi|310287465|ref|YP_003938723.1| Ribulose-phosphate 3-epimerase [Bifidobacterium bifidum S17]
gi|311064380|ref|YP_003971105.1| ribulose-phosphate 3-epimerase Rpe [Bifidobacterium bifidum
PRL2010]
gi|313140246|ref|ZP_07802439.1| pentose-5-phosphate-3-epimerase [Bifidobacterium bifidum NCIMB
41171]
gi|309251401|gb|ADO53149.1| Ribulose-phosphate 3-epimerase [Bifidobacterium bifidum S17]
gi|310866699|gb|ADP36068.1| Rpe Ribulose-phosphate 3-epimerase [Bifidobacterium bifidum
PRL2010]
gi|313132756|gb|EFR50373.1| pentose-5-phosphate-3-epimerase [Bifidobacterium bifidum NCIMB
41171]
Length = 221
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 81/219 (36%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SIQI PSIL+ADF L ++ I A A +H DVMD FVPN++ G +++ + +D
Sbjct: 2 SIQIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVKRICEVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G I+FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 120 EPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLSTHIQVDGGVSPK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + ++ D +A
Sbjct: 180 TAHIVAEAGADVLVAGSAVYGAESPAQAIDQIRDKAAAA 218
>gi|239813513|ref|YP_002942423.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus S110]
gi|239800090|gb|ACS17157.1| ribulose-phosphate 3-epimerase [Variovorax paradoxus S110]
Length = 232
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 138/222 (62%), Gaps = 8/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ +I PSIL+ADF+ LG+E++ + AGA IHFDVMD +VPN++FG + ++L+ Y+
Sbjct: 3 STPFRIAPSILSADFAHLGDELAKVIAAGADWIHFDVMDNHYVPNLTFGPMICKALKPYA 62
Query: 62 DS------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+ D HLMI +D+ A+AG D I+FHP++SPH+ RS++ I G K G+
Sbjct: 63 RTADGEAVPIDVHLMIQPVDALAASFAEAGADYISFHPDASPHVNRSIQAIKGAGCKAGL 122
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLE 173
NP + L+ ID+ID+ILIM+VNPGFGGQ I+S + KI A+ I + R I LE
Sbjct: 123 VFNPGLGLEALDWAIDDIDLILIMSVNPGFGGQSFIDSALRKIELARKRIEQSGRDIRLE 182
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
VDGG+ NI + AGAD V GS+ FN K + + D
Sbjct: 183 VDGGIKVDNIARVASAGADTFVAGSAIFNAKDYAAVISSMRD 224
>gi|223998756|ref|XP_002289051.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976159|gb|EED94487.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 263
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 92/221 (41%), Positives = 140/221 (63%), Gaps = 4/221 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F++LGEE+ N+ +AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 41 IAPSILSANFAKLGEEVDNMLEAGADVVHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPI 100
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S +D+ I DAG ITFHPE++ HI RSL+ I G K G+ NP T +
Sbjct: 101 DVHLMVSPVDAAIGDFIDAGASYITFHPEATNHIDRSLQLIRNGGCKAGLVFNPATSLDY 160
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
V D++D+IL+M+VNPGFGGQ I +T+ K R A+ I + + LE+DGGV NI
Sbjct: 161 AHHVKDKLDIILLMSVNPGFGGQAFIPATLDKARAARKFIDENGLDCRLEIDGGVKVDNI 220
Query: 184 KSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKSALAI 223
K + +AG D++V GS+ + + +Y ++ +++ +
Sbjct: 221 KEVAEAGVDMMVAGSAILKEPRTKEAYKVTIDAMREELAKV 261
>gi|255731446|ref|XP_002550647.1| ribulose-phosphate 3-epimerase [Candida tropicalis MYA-3404]
gi|240131656|gb|EER31215.1| ribulose-phosphate 3-epimerase [Candida tropicalis MYA-3404]
Length = 230
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I I PSILAADF+ LG + G + +H DVMDG FVPNIS G +I SLR
Sbjct: 1 MVKPI-IAPSILAADFANLGCNCKKVVDTGDVEWLHLDVMDGHFVPNISLGPPIIESLRK 59
Query: 60 YSD------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
VFDCH+M+S D I IA AG D TFH E++ R ++ I G K
Sbjct: 60 QFPREGEKPIVFDCHMMVSEPDEWIEEIAKAGGDSYTFHFEATKDPARVIKKIKEHGLKA 119
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
+AI P TPV + +D++DM+L+MTV PGFGGQ+ + +PK+ + + + ++
Sbjct: 120 AMAIKPRTPVEEVYPYVDDLDMVLVMTVEPGFGGQKFMPDMMPKVEKLRE--KYPHLDVQ 177
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
VDGG+ I+ AGA+++V G+S F + + L A+ I
Sbjct: 178 VDGGLGKDTIQPAADAGANVIVAGTSVFKPEDPKPVVQLLKKTVDDAIKI 227
>gi|320105769|ref|YP_004181359.1| ribulose-phosphate 3-epimerase [Terriglobus saanensis SP1PR4]
gi|319924290|gb|ADV81365.1| ribulose-phosphate 3-epimerase [Terriglobus saanensis SP1PR4]
Length = 222
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/221 (39%), Positives = 127/221 (57%), Gaps = 2/221 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ SILAADF L +EI+ + G H DVMDG FVPNI+FG V+ ++R +
Sbjct: 2 IELAFSILAADFGHLADEIALAERGGGTVCHIDVMDGHFVPNITFGPPVVAAVRKITALP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D +I A AG + ++ E H+ R++ I G + GV INP TPV
Sbjct: 62 LDCHLMIEDPDRYIPAFATAGANWVSVQQEVCRHLHRTIMLITEHGMEAGVVINPATPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +V+ + +L+MTVNPGFGGQ I + K+ L K ++ +EVDGGV
Sbjct: 122 TIVEVLPLLHHVLVMTVNPGFGGQSFIPRCVEKVAHLADLRQKMGLNFRIEVDGGVADST 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ S+V+AGA+LLV GS+ F + A+ L ++A A+
Sbjct: 182 VASVVEAGAELLVAGSAIFQENKTEQNAREFLRLARAAGAV 222
>gi|297609769|ref|NP_001063604.2| Os09g0505700 [Oryza sativa Japonica Group]
gi|60390595|sp|Q9SE42|RPE1_ORYSJ RecName: Full=Ribulose-phosphate 3-epimerase, cytoplasmic isoform;
AltName: Full=Cyt-RPEase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPEcyt; AltName:
Full=Ribulose-5-phosphate-epimerase
gi|28373310|pdb|1H1Y|A Chain A, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-
Epimerase From Rice Complexed With Sulfate
gi|28373311|pdb|1H1Y|B Chain B, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-
Epimerase From Rice Complexed With Sulfate
gi|28373312|pdb|1H1Z|A Chain A, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-
Epimerase From Rice Complexed With Sulfate And Zinc
gi|28373313|pdb|1H1Z|B Chain B, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-
Epimerase From Rice Complexed With Sulfate And Zinc
gi|6007803|gb|AAF01048.1|AF189365_1 D-ribulose-5-phosphate 3-epimerase [Oryza sativa]
gi|125564291|gb|EAZ09671.1| hypothetical protein OsI_31954 [Oryza sativa Indica Group]
gi|215697446|dbj|BAG91440.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679043|dbj|BAF25518.2| Os09g0505700 [Oryza sativa Japonica Group]
Length = 228
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 130/218 (59%), Gaps = 9/218 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ +A AG TFH E S + + +++I A G + GV++ P TPV
Sbjct: 68 DCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVE 127
Query: 125 ILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +++ ++++L+MTV PGFGGQ+ + + K+R + S+ +EVDGG+
Sbjct: 128 EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRK--KYPSLDIEVDGGLGPS 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I AGA+ +V GSS F + ++ L+KS
Sbjct: 186 TIDVAASAGANCIVAGSSIFGAAEP---GEVISALRKS 220
>gi|16802548|ref|NP_464033.1| hypothetical protein lmo0505 [Listeria monocytogenes EGD-e]
gi|47094731|ref|ZP_00232346.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|224502194|ref|ZP_03670501.1| hypothetical protein LmonFR_06687 [Listeria monocytogenes FSL
R2-561]
gi|254829402|ref|ZP_05234089.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|254900269|ref|ZP_05260193.1| hypothetical protein LmonJ_10660 [Listeria monocytogenes J0161]
gi|254911177|ref|ZP_05261189.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
gi|254935505|ref|ZP_05267202.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|255025878|ref|ZP_05297864.1| hypothetical protein LmonocytFSL_05215 [Listeria monocytogenes FSL
J2-003]
gi|16409881|emb|CAC98584.1| lmo0505 [Listeria monocytogenes EGD-e]
gi|47016871|gb|EAL07789.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|258601816|gb|EEW15141.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258608082|gb|EEW20690.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|293589104|gb|EFF97438.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
Length = 216
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 133/217 (61%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F E L L K L
Sbjct: 183 CTLAGADLIVVGSYLF----EGDIEANLEKLAKGVLT 215
>gi|241957073|ref|XP_002421256.1| pentose-5-phosphate 3 epimerase, putative; ribulose-phosphate
3-epimerase, putative [Candida dubliniensis CD36]
gi|223644600|emb|CAX40588.1| pentose-5-phosphate 3 epimerase, putative [Candida dubliniensis
CD36]
Length = 230
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/228 (38%), Positives = 124/228 (54%), Gaps = 10/228 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I I PSILAADF+ LG + G + +H DVMDG FVPNIS G +I SLR
Sbjct: 1 MVKPI-IAPSILAADFANLGCNCKRVVDTGDVEWLHLDVMDGHFVPNISLGPPIISSLRK 59
Query: 60 YSD------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
VFDCH+M+S D I IA AG D TFH E++ R ++ I G K
Sbjct: 60 QFPRESDKPIVFDCHMMVSEPDEWIEEIAKAGGDSYTFHFEATKDPARVIKKIKEHGLKA 119
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
+AI P+TPV + D++DM+L+MTV PGFGGQ+ + +PK+ + + ++
Sbjct: 120 AMAIKPKTPVEEVFPYADDLDMVLVMTVEPGFGGQKFMPDMMPKVETLRE--KYPDLDVQ 177
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
VDGG+ I+ AGA+++V G+S F + L + +A+
Sbjct: 178 VDGGLGKDTIQPAADAGANVIVAGTSVFKPEDPRPVVHYLKETVTNAI 225
>gi|289435924|ref|YP_003465796.1| ribulose-phosphate 3-epimerase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289172168|emb|CBH28714.1| ribulose-phosphate 3-epimerase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 214
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AG+ +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAELAGSDYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+++ +++I A AG II+ H E++PHI R ++ I G K GV +NP TP ++L
Sbjct: 64 VHLMLANPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKQAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++ ++D++L MTVNPGFGGQ I+STI +R K S +EVDGGV + +
Sbjct: 124 DAILGDVDLVLQMTVNPGFGGQAFIDSTIENMRYLDNWRRKNRGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF + +++ + L
Sbjct: 184 KCKQAGVDVLVAGSYFFGAEDKVACVQGLKQ 214
>gi|224055996|ref|XP_002196985.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase [Taeniopygia
guttata]
Length = 228
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E S + GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLAALGAECSRMLDCGADYLHLDVMDGHFVPNITFGHPVVESLRKR 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ FD H+M+++ + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQEPFFDMHMMVAAPEQWVKPMAVAGANQYTFHLEAADNPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK++ + S+ +EVDGGV
Sbjct: 121 PGTTVEHLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVQWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ S L +
Sbjct: 179 GPDTIHKCAEAGANMIVSGSAIMKSADPRSVINLLRN 215
>gi|255325041|ref|ZP_05366147.1| ribulose-phosphate 3-epimerase [Corynebacterium tuberculostearicum
SK141]
gi|311739501|ref|ZP_07713336.1| ribulose-phosphate 3-epimerase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|255297606|gb|EET76917.1| ribulose-phosphate 3-epimerase [Corynebacterium tuberculostearicum
SK141]
gi|311305317|gb|EFQ81385.1| ribulose-phosphate 3-epimerase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 222
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 119/225 (52%), Gaps = 8/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I I PSILAADFSRLGEE++ I A +H D+MDG FVPN+SFG D+ ++
Sbjct: 1 MSAPI-ISPSILAADFSRLGEELAAIDT--ADWVHVDIMDGHFVPNLSFGPDITATVHRS 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAI 117
+D D HLMI + + A AG I FH E+ + I +G + +I
Sbjct: 58 TDKPLDVHLMIEEPEKWVETYAKAGAHTIIFHVEAVADDQAAVDLAQRIRDLGVRAAFSI 117
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P T + D + D +L+M+V PGFGGQ+ + + K+R+ + I + + +E+D
Sbjct: 118 KPGTAIEPWLDKLHHFDEVLVMSVEPGFGGQKFMPEMLEKVRKLRRSIDDQGLDTVIEID 177
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG++ I + +AG D V GS+ F K+L DL A
Sbjct: 178 GGISPETIGAAAEAGCDAFVAGSAVFKSDDPAGVVKQLRDLAAGA 222
>gi|254522470|ref|ZP_05134525.1| ribulose-phosphate 3-epimerase [Stenotrophomonas sp. SKA14]
gi|219720061|gb|EED38586.1| ribulose-phosphate 3-epimerase [Stenotrophomonas sp. SKA14]
Length = 229
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 96/225 (42%), Positives = 144/225 (64%), Gaps = 5/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+A+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR +
Sbjct: 6 MSNCLIAPSILSANFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHG 65
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D I A+AG I+FHPE+S H+ R+++ I ++G K G+ +NP
Sbjct: 66 VTAPIDVHLMVEPVDRIIPDFAEAGATYISFHPEASRHVHRTIQLIRSLGCKPGIVLNPA 125
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV IL+ V+D++D++L+M+VNPGFGGQ I S + K+R + +I + I LE+DGGV
Sbjct: 126 TPVDILDWVLDDLDLVLLMSVNPGFGGQAFIPSALDKLRVVRKMIDASGKDIRLEIDGGV 185
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ NI + AGAD V GS+ FN SY + ++ + A
Sbjct: 186 KADNIGEIAAAGADTFVAGSAIFNA--RTSYQDVIAQMRANVAAA 228
>gi|148544391|ref|YP_001271761.1| ribulose-5-phosphate 3-epimerase [Lactobacillus reuteri DSM 20016]
gi|184153755|ref|YP_001842096.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri JCM 1112]
gi|194466501|ref|ZP_03072488.1| Ribulose-phosphate 3-epimerase [Lactobacillus reuteri 100-23]
gi|148531425|gb|ABQ83424.1| ribulose-5-phosphate 3-epimerase [Lactobacillus reuteri DSM 20016]
gi|183225099|dbj|BAG25616.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri JCM 1112]
gi|194453537|gb|EDX42434.1| Ribulose-phosphate 3-epimerase [Lactobacillus reuteri 100-23]
Length = 217
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + KAGA +H DVMDG FVP+IS+G ++++R ++ V
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVEKAGAPYLHIDVMDGTFVPSISYGPGFVKAIRPITNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 62 LDVHLMVESPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ +EVDGGV +
Sbjct: 122 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKEEKGYNFDIEVDGGVNDKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS FN + K L D
Sbjct: 182 VVDCYKAGATVAVAGSYVFNAEDPSERIKALED 214
>gi|78187503|ref|YP_375546.1| ribulose-phosphate 3-epimerase [Chlorobium luteolum DSM 273]
gi|78167405|gb|ABB24503.1| ribulose-5-phosphate 3-epimerase [Chlorobium luteolum DSM 273]
Length = 221
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 87/199 (43%), Positives = 135/199 (67%), Gaps = 2/199 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+PS + PSIL+AD LGE + AGA IH D+MDG FVPNI+FG V++++ + +
Sbjct: 3 SPSTLLAPSILSADLMHLGEALKTAEAAGADWIHCDIMDGNFVPNITFGPIVVQAIANNT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLMI+ D +I AG +T H E+ PH+ R+++ I ++G K GV++NP T
Sbjct: 63 TMVVDTHLMIADPDRYIEEFVKAGSHQVTVHQETCPHLHRTVQFIKSLGAKAGVSVNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
PV+ LE+++ ++D++LIM+VNPGFGGQ+ I ++I KI++ A+ K + + + VDGG+T
Sbjct: 123 PVSTLEEILPDLDLVLIMSVNPGFGGQKFIPASIEKIKKLDAMRRKLNPELVIAVDGGIT 182
Query: 180 SRNIKSLVQAGADLLVVGS 198
N +++V AGAD L+ G+
Sbjct: 183 EENAEAVVLAGADALIAGT 201
>gi|229817660|ref|ZP_04447942.1| hypothetical protein BIFANG_02931 [Bifidobacterium angulatum DSM
20098]
gi|229785449|gb|EEP21563.1| hypothetical protein BIFANG_02931 [Bifidobacterium angulatum DSM
20098]
Length = 221
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 122/219 (55%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI+I PSIL+ADF L ++ I + A +H DVMD FVPN++ G +++ + +D
Sbjct: 2 SIEIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVKRICEVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 120 EPIFDILDEFDMILIMTVEPGFGGQKFLDNQMGKVRRLRDEITRRGLKTKIQVDGGVSPK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + D +A
Sbjct: 180 TAHIVAEAGADVLVAGSAVYGAPNPAEAIDSIRDKAAAA 218
>gi|145202297|gb|ABF06653.2| ribulose-phosphate 3-epimerase [Lactobacillus reuteri]
Length = 217
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + KAGA +H DVMDG FVP+IS+G ++++R ++ V
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVEKAGAPYLHIDVMDGTFVPSISYGPGFVKAIRPITNMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 62 LDVHLMVESPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ +EVDGGV +
Sbjct: 122 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKEEKGYNFDIEVDGGVNDKT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS FN + K L D
Sbjct: 182 VVDCYKAGATVAVAGSYVFNAEDPAERIKALED 214
>gi|115523660|ref|YP_780571.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris BisA53]
gi|115517607|gb|ABJ05591.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris
BisA53]
Length = 231
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 109/221 (49%), Positives = 151/221 (68%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + +AG IH DVMDG FVPNIS+G DVI+S+R +++
Sbjct: 6 RPLVIAPSILASDFSKLGEEVRAVDQAGCDWIHLDVMDGHFVPNISYGPDVIKSMRPHTN 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VFD HLMI+ D + A AGCDIIT H E+ PH+ RSL+ I A+GKK GV++NP T
Sbjct: 66 KVFDAHLMIAPCDPFLEAFAKAGCDIITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTH 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +E VI +ID++L+M+VNPGFGGQ I S I KI+Q +A++G R I +EVDGGV+ +
Sbjct: 126 PSAIEYVIGDIDLVLVMSVNPGFGGQAFIPSAIEKIKQIRAMVGDRPIDIEVDGGVSDKV 185
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+L AGA+ V GS+ F SY + ++ +A +
Sbjct: 186 SGALAAAGANAFVAGSAVFKGGTVESYRANIEGIRNAAASA 226
>gi|224500399|ref|ZP_03668748.1| hypothetical protein LmonF1_12324 [Listeria monocytogenes Finland
1988]
Length = 216
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 134/217 (61%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F E L L K L
Sbjct: 183 CTLAGADLIVVGSYLF----EGDIEANLEKLSKGVLT 215
>gi|304440673|ref|ZP_07400557.1| ribulose-phosphate 3-epimerase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304370860|gb|EFM24482.1| ribulose-phosphate 3-epimerase [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 213
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 140/214 (65%), Gaps = 3/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L+ DF+ L E+ + GA +H DVMDG +VPNI+FGA +I+++R +++ F
Sbjct: 1 MISPSMLSCDFADLKGELEKLNIGGADFVHLDVMDGNYVPNITFGAPIIKAMRPHTEIPF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI ++ I +AG +IIT HP ++ H+ R+L I + G K GVA+NP ++I
Sbjct: 61 DVHLMIERPENFIEDFVNAGANIITVHPSTTKHLDRTLSLIKSYGVKAGVALNPSDDISI 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L ++D++D++L+M+VNPGFGGQ++IES+ KI++ K LI +++ I +EVDGGV N
Sbjct: 121 LNWILDKVDLVLVMSVNPGFGGQKMIESSFEKIKEIKKLIEEKNLDIKIEVDGGVKLDNA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+AGAD+LV GS F + KR L+
Sbjct: 181 MKFYEAGADMLVSGSGIFTG-DAVENIKRFKALR 213
>gi|213402011|ref|XP_002171778.1| ribulose-phosphate 3-epimerase [Schizosaccharomyces japonicus
yFS275]
gi|211999825|gb|EEB05485.1| ribulose-phosphate 3-epimerase [Schizosaccharomyces japonicus
yFS275]
Length = 230
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 75/224 (33%), Positives = 123/224 (54%), Gaps = 7/224 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P +I PS+LA DFS L +E+ + G+ +H D+MD FVP ++ G V++ +R+
Sbjct: 1 MPEPKIAPSLLAGDFSNLQKEVVRMVDYGSDWLHVDIMDSQFVPQLTIGPVVVKCMRNGV 60
Query: 62 DS---VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
FDCH+M+ + + ++ ADAG ++ FH E++ + HA G + G AI
Sbjct: 61 PKEKAFFDCHMMVMNPERWVDDFADAGANLFCFHYEATEKHMEVIERAHARGMRVGCAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P+TPV +E ++ +DM+L+MTV PG GGQ + +PK+ + + + +EVDGGV
Sbjct: 121 PKTPVEAIEPLVAHLDMVLVMTVEPGKGGQSFMPECLPKVEYLRQRYPE--LDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND--LKKSA 220
+ + I S AGA+++V G++ F L L+ A
Sbjct: 179 SPKTIDSAANAGANVIVAGTAVFLASSPKDVIATLRSSVLRAQA 222
>gi|227544375|ref|ZP_03974424.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri CF48-3A]
gi|300909764|ref|ZP_07127225.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri SD2112]
gi|227185638|gb|EEI65709.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri CF48-3A]
gi|300893629|gb|EFK86988.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri SD2112]
Length = 231
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + KAGA +H DVMDG FVP+IS+G ++++R ++ V
Sbjct: 16 IKVAPSILSADYVNLQKDIEKVEKAGAPYLHIDVMDGTFVPSISYGPGFVKAIRPITNMV 75
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 76 LDVHLMVESPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 135
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ +EVDGGV +
Sbjct: 136 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKEEKGYNFDIEVDGGVNDKT 195
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS FN + K L D
Sbjct: 196 VVDCYKAGATVAVAGSYVFNAEDPAERIKALED 228
>gi|227363184|ref|ZP_03847318.1| ribulose-5-phosphate 3-epimerase [Lactobacillus reuteri MM2-3]
gi|325682711|ref|ZP_08162227.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri MM4-1A]
gi|227071790|gb|EEI10079.1| ribulose-5-phosphate 3-epimerase [Lactobacillus reuteri MM2-3]
gi|324977061|gb|EGC14012.1| ribulose-phosphate 3-epimerase [Lactobacillus reuteri MM4-1A]
Length = 231
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + KAGA +H DVMDG FVP+IS+G ++++R ++ V
Sbjct: 16 IKVAPSILSADYVNLQKDIEKVEKAGAPYLHIDVMDGTFVPSISYGPGFVKAIRPITNMV 75
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ S + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 76 LDVHLMVESPEHILPMFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 135
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q A+ ++ +EVDGGV +
Sbjct: 136 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVDKIAQLNAIKEEKGYNFDIEVDGGVNDKT 195
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS FN + K L D
Sbjct: 196 VVDCYKAGATVAVAGSYVFNAEDPSERIKALED 228
>gi|296395035|ref|YP_003659919.1| ribulose-phosphate 3-epimerase [Segniliparus rotundus DSM 44985]
gi|296182182|gb|ADG99088.1| ribulose-phosphate 3-epimerase [Segniliparus rotundus DSM 44985]
Length = 216
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+ L +++ + GA +H DVMD FVPN++ GA V+ S++ +D
Sbjct: 1 MIAPSILSADFANLARDVAAVR--GADWLHVDVMDNHFVPNLTLGAPVVASIKKATDIPL 58
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI A+ G +TFH E++ + + I A G G+AI P T +
Sbjct: 59 DCHLMIEDPARWAPQYAEIGAKNVTFHAEAADNPLAVAKDIRAAGAGAGLAIKPGTALDP 118
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
DV+ D +LIM+V PGFGGQ+ + + K+R+ +AL + ++ +E+DGG+ + I
Sbjct: 119 YLDVLSGFDTVLIMSVEPGFGGQKFLPDVLDKVRRLRALKDKGELTVLIEIDGGINRQTI 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ +AG D V GS+ + + + L +L +
Sbjct: 179 QAAAEAGVDCFVAGSAVYGAEDPEKAVESLRELAR 213
>gi|111024117|ref|YP_707089.1| ribulose-phosphate 3-epimerase [Rhodococcus jostii RHA1]
gi|110823647|gb|ABG98931.1| ribulose-phosphate 3-epimerase [Rhodococcus jostii RHA1]
Length = 227
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF+RL EE + AGA +H DVMD FVPN++ G V++SL +
Sbjct: 1 MATPM-IAPSILSADFARLAEEADAV--AGADWLHVDVMDAHFVPNLTLGLPVVQSLLAA 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D DCHLMI A+AG +TFH E++ R R I A G K G+++ P
Sbjct: 58 TDIPLDCHLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPRSVARDIRAAGAKAGLSVKPG 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TP+ +++ + D +L+M+V PGFGGQ I + K + + L+ + + +E+DGG+
Sbjct: 118 TPIEPYLEILKDFDTLLVMSVEPGFGGQSFIPEVLSKAKAVRRLVDSGELRLVVEIDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +++ +AG D V GS+ + + L A
Sbjct: 178 NADTVEAAAEAGVDCFVAGSAVYGTSDPAEAVRALRASAAKA 219
>gi|296448053|ref|ZP_06889957.1| ribulose-phosphate 3-epimerase [Methylosinus trichosporium OB3b]
gi|296254453|gb|EFH01576.1| ribulose-phosphate 3-epimerase [Methylosinus trichosporium OB3b]
Length = 226
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 98/192 (51%), Positives = 131/192 (68%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + PSIL+ADF+RLG+E + AGA +H DVMDG FVPNI+FG V+ +LR +
Sbjct: 3 EVLLAPSILSADFARLGDEARAMEAAGADWLHLDVMDGHFVPNITFGPGVVAALRRVTKL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ D +I A+AG DIIT H E PH+ R+L+ I A GKK GV++NP T
Sbjct: 63 PLDAHLMIAPADPYIGAFAEAGADIITAHAEGGPHLHRTLQAIRARGKKAGVSLNPATHE 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
L V+D++D+IL+MTV+PGFGGQ I S + KIR + +IG+R I L+VDGGVT
Sbjct: 123 TALVHVLDDVDLILVMTVDPGFGGQSFIHSQLAKIRAIREMIGRRPIRLQVDGGVTPATT 182
Query: 184 KSLVQAGADLLV 195
++V+AGAD LV
Sbjct: 183 TAIVEAGADTLV 194
>gi|193212188|ref|YP_001998141.1| Ribulose-phosphate 3-epimerase [Chlorobaculum parvum NCIB 8327]
gi|193085665|gb|ACF10941.1| Ribulose-phosphate 3-epimerase [Chlorobaculum parvum NCIB 8327]
Length = 220
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ + PSIL+ADF+ L + KAGA +H DVMDG FVPNI+FG ++++++ +
Sbjct: 4 KTTLLAPSILSADFTNLKASVELAEKAGADWMHCDVMDGVFVPNITFGPFIVKAIKQCTS 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI D +I A AG D IT H E+ PH+ R+++ I + G K GV+INP TP
Sbjct: 64 LVIDTHLMIIDPDKYIEDFAKAGSDQITVHLEACPHLHRTIQFIKSFGVKAGVSINPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V++LE V+ ++D++L+M+VNPGFGGQ+ I +++ KI A+ + + + VDGG+T
Sbjct: 124 VSLLEPVLADLDLVLLMSVNPGFGGQKFIPASVAKIANLDAMRMEMNPDMVIAVDGGITE 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N +V+AGAD L+ G++FF ++ A++L L
Sbjct: 184 ENAAQVVEAGADSLIAGTAFFRAADPMAAARKLKGL 219
>gi|153855362|ref|ZP_01996511.1| hypothetical protein DORLON_02525 [Dorea longicatena DSM 13814]
gi|149752182|gb|EDM62113.1| hypothetical protein DORLON_02525 [Dorea longicatena DSM 13814]
Length = 221
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF LG+E+ GA+ IHFDVMDG FVP+ISFG V+ S+ ++ D
Sbjct: 6 LAPSILAADFKVLGQEMKKTEDNGAEYIHFDVMDGMFVPSISFGMPVMASIHDATEQFMD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ AG D +T H E+ ++ +L I G K G++INPET V +
Sbjct: 66 AHLMVQEPIRYVEAFQKAGADSVTVHVEACEDVKATLNKIRECGMKVGLSINPETDVKEV 125
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
++E+DMIL+M V+PGFGGQ+ I ++ KIR +A++ ++++ ++VDGGV N++
Sbjct: 126 VPYLEEVDMILVMCVHPGFGGQKFIPESLDKIRAIRAMLNEKNLETDIQVDGGVYVENVR 185
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGA+++V GS+ F + AK + LK
Sbjct: 186 EVLDAGANVIVSGSAVFRGDAGENTAKFMEILK 218
>gi|227872155|ref|ZP_03990525.1| ribulose-phosphate 3-epimerase [Oribacterium sinus F0268]
gi|227842013|gb|EEJ52273.1| ribulose-phosphate 3-epimerase [Oribacterium sinus F0268]
Length = 233
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 93/204 (45%), Positives = 135/204 (66%), Gaps = 2/204 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSILAADFS L E+++ AGAK HFD+MDG FVPNIS+GA ++ +LR+ S + F
Sbjct: 16 RLSPSILAADFSALQEDVALAEAAGAKSFHFDIMDGHFVPNISYGAGIVSALRNKSKAFF 75
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ D AG D ++ H E+ H+ RSL+ I +G + GVA+NP T ++
Sbjct: 76 DVHLMVEEPDYFFADYKKAGADRVSVHVEAVKHLDRSLQAIRELGMEGGVALNPATSLST 135
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNI 183
+E+++ ILIM+VNPGFGGQ I T+ KI++ + + +R++ LE VDGGV NI
Sbjct: 136 IEEILPICPYILIMSVNPGFGGQSFISYTLDKIKRLRKMAEERNLPLEIGVDGGVKLDNI 195
Query: 184 KSLVQAGADLLVVGSSFFNQKGEI 207
+++AGA+ +V GSS F +K EI
Sbjct: 196 SPILEAGANFIVAGSSVFGKKDEI 219
>gi|194863774|ref|XP_001970607.1| GG10731 [Drosophila erecta]
gi|190662474|gb|EDV59666.1| GG10731 [Drosophila erecta]
Length = 221
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 125/222 (56%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M+ +I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR
Sbjct: 1 MSVQPKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I +ADAG ++ TFH E + R R + G K G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRQVRESGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V LE + D++L+MTV PGFGGQ + +PK++ + S+ +EVDGGV
Sbjct: 121 GTEVQDLEKYVSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRD--NYPSLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+++V G++ + K + D+ +S L
Sbjct: 179 PKTIHCCAEAGANMIVSGTAVVGASDQAQVIKEMRDVVRSYL 220
>gi|307181842|gb|EFN69282.1| Ribulose-phosphate 3-epimerase [Camponotus floridanus]
Length = 228
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 83/218 (38%), Positives = 123/218 (56%), Gaps = 5/218 (2%)
Query: 1 MTP--SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M S +I PSIL AD ++L +E + GA +H DVMDG FVPN+SFG +++ LR
Sbjct: 1 MAKHLSAKIGPSILNADLAQLYKESQKLLDNGADYLHLDVMDGHFVPNLSFGHPIVKCLR 60
Query: 59 -SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D+ F+ H+M+S+ + I +ADA D TFH E + R + G K GVA+
Sbjct: 61 SKIKDAFFETHMMVSNPEQWIEPMADANVDQYTFHVEPIKDVPLICRKVKEAGMKVGVAL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P TPV ++ D +D D+ILIMTV PGFGGQ+ +E + K+ + + +EVDGG
Sbjct: 121 KPGTPVNVITDYVDLADLILIMTVEPGFGGQKFMEPMLQKVAWLRE--NYPGLDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V I++ +AGA+++V G++ + L D
Sbjct: 179 VGPSTIEACAKAGANMIVSGTAVIGSTDQAKVITTLRD 216
>gi|227524613|ref|ZP_03954662.1| ribulose-phosphate 3-epimerase [Lactobacillus hilgardii ATCC 8290]
gi|227088288|gb|EEI23600.1| ribulose-phosphate 3-epimerase [Lactobacillus hilgardii ATCC 8290]
Length = 217
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+AD+ L +I + K GA+ +H D+MDG FVP +S+G +++++ ++
Sbjct: 2 IKIAPSILSADYVNLQRDIEKVDKGGAELLHIDIMDGAFVPALSYGPGWVKAIKPITNLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + + +I+ ADAG DII H E++PHI R+L+ I K V INP TPV+
Sbjct: 62 LDVHMMVQNPERYIDDFADAGADIIGVHKEATPHIHRALQMIKNRNVKAEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ+ + T+ KI + + ++ + +E+DGGV
Sbjct: 122 AITPVLYMVDQVLVMTVNPGFGGQKFLPETVKKITELDKIKKEQGLNFDIEIDGGVNETT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS FN + K L D
Sbjct: 182 VVGAYKAGATVAVAGSYIFNADDPVLKIKALKD 214
>gi|88856226|ref|ZP_01130886.1| ribulose-phosphate 3-epimerase [marine actinobacterium PHSC20C1]
gi|88814545|gb|EAR24407.1| ribulose-phosphate 3-epimerase [marine actinobacterium PHSC20C1]
Length = 220
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/219 (40%), Positives = 126/219 (57%), Gaps = 7/219 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PSILAADF L +IS I + A +H D+MD FVPN++FG + ++ S
Sbjct: 2 SVRISPSILAADFVNLERDISRI--SNADLVHVDIMDNHFVPNLTFGLQMTERIQQVSTI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D AD G +TFH E++ RT+ + G + G+A+ P T +
Sbjct: 60 PLDIHLMIDNPDRWAPDYADLGAFAVTFHAEAASDAVALARTLRSQGARAGIAVKPGTAI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++++E D +L+MTV PGFGGQ +E T+PK+RQ + L+ KR + LEVDGGV R
Sbjct: 120 EPYLELLEEFDQVLVMTVEPGFGGQSFMEETMPKLRQLRELVDKRGLDVWLEVDGGVDER 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ AGAD V GSS F R+ +L++ A
Sbjct: 180 TIEIAAAAGADTFVAGSSVFRSDDPS---LRVTELRERA 215
>gi|224503695|ref|ZP_03672002.1| hypothetical protein LmonFR_14549 [Listeria monocytogenes FSL
R2-561]
gi|255028235|ref|ZP_05300186.1| hypothetical protein LmonL_01439 [Listeria monocytogenes LO28]
gi|284800455|ref|YP_003412320.1| hypothetical protein LM5578_0201 [Listeria monocytogenes 08-5578]
gi|284993641|ref|YP_003415409.1| hypothetical protein LM5923_0201 [Listeria monocytogenes 08-5923]
gi|284056017|gb|ADB66958.1| hypothetical protein LM5578_0201 [Listeria monocytogenes 08-5578]
gi|284059108|gb|ADB70047.1| hypothetical protein LM5923_0201 [Listeria monocytogenes 08-5923]
Length = 214
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R + S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDNWRRENHGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF + + + L
Sbjct: 184 KCKQAGVDILVAGSYFFGATDKAACIQGLKK 214
>gi|145242032|ref|XP_001393662.1| ribulose-phosphate 3-epimerase [Aspergillus niger CBS 513.88]
gi|134078206|emb|CAK40285.1| unnamed protein product [Aspergillus niger]
Length = 252
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/246 (34%), Positives = 132/246 (53%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG E S G+ +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFGTLGSECSTKIAQGSDWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI + DAGCD+ FH E++
Sbjct: 61 VARPTEPNGKGTFDCHMMIQEPHKWVKDFKDAGCDLYCFHYEAAISSTAATSPADNTTTT 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 KTSPKDLIRYIHEEGMQAGIAIKPDTPVDVLWDILANENEKERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ + ++++EVDGG+ I +AGA+++V GS+ F +
Sbjct: 181 FMASELPKVKALRE--KYPNLNIEVDGGLGLGTIDQAAEAGANVIVAGSAVFGAQDPADV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|159483647|ref|XP_001699872.1| ribulose phosphate-3-epimerase [Chlamydomonas reinhardtii]
gi|158281814|gb|EDP07568.1| ribulose phosphate-3-epimerase [Chlamydomonas reinhardtii]
Length = 254
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/231 (35%), Positives = 122/231 (52%), Gaps = 21/231 (9%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ + PSIL+ADF+RL EE + GA +H DVMDG FVPN++ GA V+ SLR ++D
Sbjct: 16 PAATVAPSILSADFARLAEECKRMVDLGADWLHVDVMDGHFVPNLTIGAPVVASLRKHTD 75
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI-----------------RRSLRT 105
+ DCHLM+S+ + + A AG D+ TFH E++ R
Sbjct: 76 AFLDCHLMVSNPEQWVKDFAKAGADMFTFHLEAAAGPGPDDWHALSPDTANQTVVDMCRG 135
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I A G+AI P TP ++ + E +DM+L+MTV PGFGGQ + + K +
Sbjct: 136 IKAAHMHVGIAIKPSTPPELVAPYVAEGLVDMVLVMTVEPGFGGQSFMPQAVAKAAFLRN 195
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++++VDGG+ I +AGA+++V GS+ F + K L
Sbjct: 196 KF--PDLNIQVDGGLAPNTIDRAAEAGANVIVAGSAVFGAADPAAVMKTLK 244
>gi|257461277|ref|ZP_05626374.1| ribulose-phosphate 3-epimerase [Campylobacter gracilis RM3268]
gi|257441305|gb|EEV16451.1| ribulose-phosphate 3-epimerase [Campylobacter gracilis RM3268]
Length = 213
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 128/215 (59%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF RL EEI + +AGA IH DVMDG FVPN++ G V ++ S
Sbjct: 1 MYVAPSILSADFGRLAEEIRAVCEAGADLIHVDVMDGHFVPNLTIGPLVASAVAKASSKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ +++ ++FH E H R + I G V +NP TP++
Sbjct: 61 LDIHLMVKNVPFFVDLFLPLKPKFLSFHIEEEQHPLRLIDHIRRSGVSPAVVLNPHTPLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE ++ E+DM+L+M+VNPGFGGQ+ I S + KI+Q + LI ++ +EVDGGV N
Sbjct: 121 ALEFILGEVDMVLLMSVNPGFGGQKFIPSALEKIKQLRDLIDRKGAKCLIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + +AGAD++V G+ F+ YA+ + LK
Sbjct: 181 IADIDEAGADVVVAGNYIFSSND---YAEAIRALK 212
>gi|283456077|ref|YP_003360641.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium Bd1]
gi|283102711|gb|ADB09817.1| Rpe1 Ribulose-phosphate 3-epimerase [Bifidobacterium dentium Bd1]
Length = 221
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +D
Sbjct: 2 TIQIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVARICQVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G ++FH ++ R R + MG K A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+ +
Sbjct: 120 EPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVSPK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + + D ++A
Sbjct: 180 TAHIVAEAGADVLVAGSAVYGAESPAEAIDSIRDKAEAA 218
>gi|195581258|ref|XP_002080451.1| GD10239 [Drosophila simulans]
gi|194192460|gb|EDX06036.1| GD10239 [Drosophila simulans]
Length = 221
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M +I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR
Sbjct: 1 MPVQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I +ADAG ++ TFH E + R R + G K G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRQVQESGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V LE + D++L+MTV PGFGGQ + +PK++ + ++ +EVDGGV
Sbjct: 121 GTEVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRE--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+++V G++ + K L D+ S L
Sbjct: 179 PKTIHCCAEAGANMIVSGTAVVGASDQSQVIKELRDVVHSYL 220
>gi|154245855|ref|YP_001416813.1| ribulose-phosphate 3-epimerase [Xanthobacter autotrophicus Py2]
gi|154159940|gb|ABS67156.1| Ribulose-phosphate 3-epimerase [Xanthobacter autotrophicus Py2]
Length = 230
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 141/223 (63%), Gaps = 3/223 (1%)
Query: 1 MTPSI-QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M + I PSIL+ADF+RLG E+ + + GA+ IHFDVMD +VPN++ G V++SLR
Sbjct: 1 MARAYPIIAPSILSADFTRLGAEVEAVLEGGAEWIHFDVMDNHYVPNLTIGPLVLQSLRK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ + D HLM+ +D I A AG D+I+FHPE+S H+ RSL+ I + G K G+ +NP
Sbjct: 61 VTKAFVDVHLMVKPVDGMIEAFAGAGADLISFHPEASEHVDRSLQLIRSKGVKAGLVLNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+++L+ +D++D++L+M+VNPGFGGQ I + K++ + I R I LE+DGG
Sbjct: 121 ATPLSVLDYTLDQLDLVLVMSVNPGFGGQAFIPGALDKLKAIRERIDASGRDIRLEIDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V NI ++ AGAD V GS+ + K + + +SA
Sbjct: 181 VKVDNIGAIAAAGADTFVAGSAIYGAKDYGATIAAMKREIESA 223
>gi|238883189|gb|EEQ46827.1| ribulose-phosphate 3-epimerase [Candida albicans WO-1]
Length = 230
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/222 (38%), Positives = 122/222 (54%), Gaps = 10/222 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I I PSILAADF+ LG + G + +H DVMDG FVPNIS G +I SLR
Sbjct: 1 MVKPI-IAPSILAADFANLGCNCKRVVDTGDVEWLHLDVMDGHFVPNISLGPPIISSLRK 59
Query: 60 YSD------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
VFDCH+M+S D I IA AG D TFH E++ R ++ I G K
Sbjct: 60 QFPREGDKPIVFDCHMMVSEPDEWIEEIAKAGGDSYTFHFEATKDPARVIKKIKEHGLKA 119
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
+AI P+TPV + +++DM+L+MTV PGFGGQ+ + +PK+ + ++ ++
Sbjct: 120 AMAIKPKTPVEEVFPYAEDLDMVLVMTVEPGFGGQKFMPDMMPKVETLRE--KYPNLDVQ 177
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
VDGG+ I+ AGA+++V G+S F + + L
Sbjct: 178 VDGGLGKDTIQPAADAGANVIVAGTSVFKPEDPKPVVQHLKQ 219
>gi|254830510|ref|ZP_05235165.1| hypothetical protein Lmon1_04077 [Listeria monocytogenes 10403S]
Length = 216
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 94/217 (43%), Positives = 133/217 (61%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDGGV K
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADL+VVGS F E L L K L
Sbjct: 183 CTLAGADLIVVGSYLF----EGDIEANLEKLSKGVLT 215
>gi|242049774|ref|XP_002462631.1| hypothetical protein SORBIDRAFT_02g029250 [Sorghum bicolor]
gi|241926008|gb|EER99152.1| hypothetical protein SORBIDRAFT_02g029250 [Sorghum bicolor]
Length = 225
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 124/216 (57%), Gaps = 6/216 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+L++DF+ L E + + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 3 AAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKA 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ ++ AG TFH E + + + +++I + G + GV++ P TP
Sbjct: 63 YLDCHLMVTNPSDYVEPFGKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPGTP 122
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V + +++ ++++L+MTV PGFGGQ+ + + K+R + S+ +EVDGG+
Sbjct: 123 VEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRK--KYPSLDIEVDGGLG 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I AGA+ +V GSS F + L
Sbjct: 181 PSTIDVAASAGANCIVAGSSIFGAADPGAVISVLRK 216
>gi|241668268|ref|ZP_04755846.1| ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876801|ref|ZP_05249511.1| D-ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842822|gb|EET21236.1| D-ribulose-phosphate 3-epimerase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 222
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 133/219 (60%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
QI PSIL+AD +RLG+++ + +AGA +HFDVMD +VPN++FG V+++LR Y
Sbjct: 1 MRKFQINPSILSADLARLGDDVQAVLEAGADNVHFDVMDNHYVPNLTFGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G G+A+NP
Sbjct: 61 ISAGMDVHLMVKPVDALIESFARAGASSIVFHPEASEHIDRSLQLIKSFGIDAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T + L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 121 TGIDCLKYVESHIDRVLIMSVNPGFGGQKFIPAMLDKAKEVSQWIKSTGRDILLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G D V GS+ FN SY + ++ ++
Sbjct: 181 NPNNIAEIAACGVDAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|119716672|ref|YP_923637.1| ribulose-phosphate 3-epimerase [Nocardioides sp. JS614]
gi|119537333|gb|ABL81950.1| ribulose-5-phosphate 3-epimerase [Nocardioides sp. JS614]
Length = 220
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PSIL ADF+ LG E++ I A +H DVMD FVPN++FG ++ +L ++
Sbjct: 3 IQITPSILNADFAALGAEVARI--GSADWVHVDVMDNHFVPNLTFGPTMVEALARSTEVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ D H +AGC +TFH E++ R R I A G + +A+ P TPV
Sbjct: 61 LDAHLMVEVPDRHALAYVEAGCGSVTFHVEAAQAPVRLAREIRAHGARASMALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
ED++ E+DM+LIMTV PGFGGQ+ ++ +PKIR+A+ L+ K + L+VDGG++
Sbjct: 121 PYEDLLPELDMLLIMTVEPGFGGQRFLDLCLPKIRRARELMDKHGLETWLQVDGGISLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGE 206
I+ V AGAD+ V GS+ ++
Sbjct: 181 IERCVDAGADVFVAGSAVYSAADP 204
>gi|300869948|ref|YP_003784819.1| ribulose-phosphate 3-epimerase [Brachyspira pilosicoli 95/1000]
gi|300687647|gb|ADK30318.1| ribulose-phosphate 3-epimerase [Brachyspira pilosicoli 95/1000]
Length = 215
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 133/213 (62%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I I PSIL A F+ L I + +AGA +H D+MDG FVP I+FG+ ++ ++ +
Sbjct: 3 KIIIAPSILTASFANLESTIKELEEAGADYLHLDIMDGSFVPQITFGSKIVSDIKKITSL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI S + HI+ A AG DII+ H E + H+ + + I + K G+ +NP T V
Sbjct: 63 PLDVHLMIVSPEKHIDDFAKAGADIISVHYEGNIHLHKLIMQIKSHNVKAGIVLNPHTRV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++E +ID+ID +LIM+VNPGFGGQ+ I ++I KI + K LIG+R I + VDGG+
Sbjct: 123 DVIEPLIDDIDNVLIMSVNPGFGGQKFITNSIKKIEETKKLIGQREIIISVDGGINLNTC 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++AGA+LLV GS+ + K + K+L +
Sbjct: 183 SDVIKAGANLLVAGSAIIDSKDKKETIKQLRNF 215
>gi|297621101|ref|YP_003709238.1| ribulose-phosphate 3-epimerase [Waddlia chondrophila WSU 86-1044]
gi|297376402|gb|ADI38232.1| ribulose-phosphate 3-epimerase [Waddlia chondrophila WSU 86-1044]
Length = 234
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 118/227 (51%), Gaps = 15/227 (6%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSILA DF L EE I AGA +H D+MDG FV N++ G + ++ +D
Sbjct: 5 QIKISPSILAGDFGNLAEEAKRIEDAGADMLHVDIMDGNFVDNLTLGPKALAAINRSTDL 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H+M+ ++ + +AG D++TFH E++ + +L I K G+A PET
Sbjct: 65 FLDVHIMVYHPFDYVEKMVEAGADMLTFHFEATEDVEDTLNFIRRCNIKAGLAFCPETSK 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI------------- 170
++ +D+ DMIL+MTVNPGFGGQ + + K+R + + +I
Sbjct: 125 EMVIKYLDKCDMILLMTVNPGFGGQAFMPEVLDKVRFVREACDRLNIRQGGVVPKEGTLP 184
Query: 171 --SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+EVDGG+ + ++AGA++LV GS + + L +
Sbjct: 185 PFDIEVDGGINDQTAGQCIEAGANVLVSGSYLYEFPTLQEGIQTLRN 231
>gi|251771504|gb|EES52081.1| Ribulose-phosphate 3-epimerase [Leptospirillum ferrodiazotrophum]
Length = 229
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 130/215 (60%), Gaps = 3/215 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSIL+ADF RLGE++ +AGA H D+MDG FVPN++FG V+ L+ +
Sbjct: 8 RELLIAPSILSADFLRLGEQVREAAEAGADLFHLDMMDGHFVPNLTFGPPVVEGLQKLTS 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ HLM+ + ++ +A A +T H E++ H+ L I ++G K GVAI+P TP
Sbjct: 68 LPLEAHLMVLRPEIYLEDLASARMHRVTVHAEATTHLHYVLGKIGSLGMKAGVAISPATP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVT 179
V ++EDV+D ID++L+MTVNPGFGGQ I ++ K+ + L+ + + LEVDGG+
Sbjct: 128 VGMVEDVLDMIDLVLVMTVNPGFGGQSFITHSLKKVESMRTLLDRAGAAHVRLEVDGGIK 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ NI + GAD V+GS+ F +K + +
Sbjct: 188 AGNISRVADCGADTFVMGSAIFGEKPCETVFGEIR 222
>gi|7498654|pir||T15978 hypothetical protein F08F8.4 - Caenorhabditis elegans
Length = 1741
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 124/227 (54%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + PSIL AD + L E + AGA +H DVMDG FVPN++FG V+ SLR
Sbjct: 1515 MTLRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVESLRKS 1574
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP---HIRRSLRTIHAMGKKTGV 115
++ FD HLM+S+ + +A AG TFH E+ + + I G K G+
Sbjct: 1575 LGAEPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGL 1634
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
++ P T V + + +D LIMTV PGFGGQ+ +E+ + K+R ++ +++++VD
Sbjct: 1635 SVKPGTSVEHILKHANHLDNALIMTVEPGFGGQKFMENMMEKVRTIRS--KYPNLTIQVD 1692
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
GGVT NI+ QAGA+ +V G+ + + + ++A++
Sbjct: 1693 GGVTPENIEISAQAGANAIVSGTGIIKAADQSVAMTTIRNAVEAAIS 1739
>gi|134098690|ref|YP_001104351.1| ribulose-phosphate 3-epimerase [Saccharopolyspora erythraea NRRL
2338]
gi|133911313|emb|CAM01426.1| putatibe ribulose-phosphate 3-epimerase [Saccharopolyspora
erythraea NRRL 2338]
Length = 233
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITK---AGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M+ I PSIL+ADF+RL +E++ + A +H DVMD FVPN++ G V++SL
Sbjct: 1 MSNQPMIAPSILSADFARLADEMAAVNGEPGHRADWLHVDVMDAHFVPNLTLGLPVVKSL 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+D DCHLMI D A+AG +T H E++ + + A G K G++I
Sbjct: 61 LKATDIPIDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAAEDPVMLAKNLRAAGAKAGLSI 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVD 175
P TP+ +V+ D +L+M+V PGFGGQ I + K+R+A+ L+ ++ +E+D
Sbjct: 121 KPNTPLEPYVEVLKHYDTLLVMSVEPGFGGQSFIADVLTKVRKARELVDTGHLNLVVEID 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
GG+ + I+ +AG D V GS+ + + L
Sbjct: 181 GGINADTIEQAAEAGVDCFVAGSAVYGAGDPAQAVEALR 219
>gi|15606282|ref|NP_213661.1| ribulose-5-phosphate 3-epimerase [Aquifex aeolicus VF5]
gi|6226024|sp|O67098|RPE_AQUAE RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2983483|gb|AAC07062.1| ribulose-5-phosphate 3-epimerase [Aquifex aeolicus VF5]
Length = 222
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 86/219 (39%), Positives = 137/219 (62%), Gaps = 2/219 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILA D+ +GE+I + GA +H+DVMDG FVPNI+ G +++ +R + D
Sbjct: 4 LAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPID 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I +AG + I+ H E++ HI R+L+ I +G K GV +NP T ++ +
Sbjct: 64 AHLMIENPDKYIPKFVEAGANWISVHIENNYHIHRTLQLIKELGAKAGVVVNPGTSLSAI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
E+ + D +L+M+VNPGF GQ+ IE +I ++R K + + S +E+DGG+ NI
Sbjct: 124 EEALYYADYVLLMSVNPGFSGQKFIERSIERLRILKEMRDRINPSCLIEIDGGIKENNIA 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+V+AGAD++VVGS F K + ++L L SA+++
Sbjct: 184 EVVRAGADVVVVGSGIFGAKDIEAQTRKLKSLMLSAVSV 222
>gi|16804696|ref|NP_466181.1| hypothetical protein lmo2659 [Listeria monocytogenes EGD-e]
gi|47095463|ref|ZP_00233072.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|224499332|ref|ZP_03667681.1| hypothetical protein LmonF1_06407 [Listeria monocytogenes Finland
1988]
gi|254830908|ref|ZP_05235563.1| hypothetical protein Lmon1_06089 [Listeria monocytogenes 10403S]
gi|254899889|ref|ZP_05259813.1| hypothetical protein LmonJ_08746 [Listeria monocytogenes J0161]
gi|254912905|ref|ZP_05262917.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
gi|254937286|ref|ZP_05268983.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|16412159|emb|CAD00872.1| lmo2659 [Listeria monocytogenes EGD-e]
gi|47016073|gb|EAL06997.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes str. 1/2a
F6854]
gi|258609893|gb|EEW22501.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|293590906|gb|EFF99240.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes J2818]
Length = 214
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R K S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDNWRRKNHGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF + + + L
Sbjct: 184 KCKQAGVDILVAGSYFFGATDKAACIQGLKK 214
>gi|300767257|ref|ZP_07077169.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180471|ref|YP_003924599.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|300495076|gb|EFK30232.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045962|gb|ADN98505.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 217
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 127/217 (58%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L ++ AGA +H DVMDG FVPN+SFG + LR + +
Sbjct: 2 IKVAPSILSADFANLQRDVQMAENAGADALHIDVMDGQFVPNLSFGMSTVADLRPVTSLM 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + + A AG D+I H ES+ HI +L+ I G K V +NP TP++
Sbjct: 62 LDCHLMIMDPERFVGQFAKAGADLIGVHVESTRHIYHALQLIKDAGVKAEVVVNPGTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ +++ +D +LIMTVNPGFGGQ ++ + KI L + +EVDGG+ +
Sbjct: 122 MISELLPLVDQVLIMTVNPGFGGQHFLDQMVAKIAALNELKQQHGYQFEIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K+ AGA + V GS ++ A+R+ DLK +
Sbjct: 182 VKACYDAGATVAVAGSYVYDSADP---AQRIQDLKVA 215
>gi|238488705|ref|XP_002375590.1| ribulose-phosphate 3-epimerase [Aspergillus flavus NRRL3357]
gi|317136866|ref|XP_001727342.2| ribulose-phosphate 3-epimerase [Aspergillus oryzae RIB40]
gi|220697978|gb|EED54318.1| ribulose-phosphate 3-epimerase [Aspergillus flavus NRRL3357]
Length = 252
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/246 (34%), Positives = 133/246 (54%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S G+ +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFASLGSECSTKMAQGSDWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI + +AGCD+ FH E++
Sbjct: 61 VDRPTQPHGRGTFDCHMMIMEPHKWVKEFKNAGCDLYCFHYEAAVASVAATEPADSTTTR 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+AI P+TPV +L +++ + DM+L+MTV PGFGGQ+
Sbjct: 121 KTSPKELIRYIHEEGMQAGIAIKPDTPVDVLWEILESKDEKERPDMVLVMTVYPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ + ++++EVDGG+ + +AGA+++V GS+ F +
Sbjct: 181 FMASELPKVQALRERY--PNLNIEVDGGLGLGTVDQAAEAGANVIVAGSAVFGAQDPADV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|28378321|ref|NP_785213.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum WCFS1]
gi|28271156|emb|CAD64061.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum WCFS1]
Length = 217
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 127/217 (58%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L ++ AGA +H DVMDG FVPN+SFG + LR + +
Sbjct: 2 IKVAPSILSADFANLQRDVQMAENAGADALHIDVMDGQFVPNLSFGMSTVADLRPVTSLM 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + + A AG D+I H ES+ HI +L+ I G K V +NP TP++
Sbjct: 62 LDCHLMIMDPERFVGQFAKAGADLIGVHVESTRHIYHALQLIKDAGVKAEVVVNPGTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ +++ +D +LIMTVNPGFGGQ ++ + KI L + +EVDGG+ +
Sbjct: 122 MISELLPLVDQVLIMTVNPGFGGQHFLDQMVAKIAALNELKQQHGYRFEIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+K+ AGA + V GS ++ A+R+ DLK +
Sbjct: 182 VKACYDAGATVAVAGSYVYDSADP---AQRIQDLKVA 215
>gi|171684765|ref|XP_001907324.1| hypothetical protein [Podospora anserina S mat+]
gi|170942343|emb|CAP67995.1| unnamed protein product [Podospora anserina S mat+]
Length = 252
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 88/245 (35%), Positives = 128/245 (52%), Gaps = 32/245 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG S K GA +H D+MDG FVPN++FG V+ +RS+
Sbjct: 1 MAPKAIIAPSILSADFADLGAACSRTIKQGADWLHVDIMDGHFVPNLTFGPPVVVKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESSPH-------------- 98
+ FDCH+MI+ + +AGCD+ FH E++ +
Sbjct: 61 VEKPAESFGKGTFDCHMMIAEPKKWVKEFKNAGCDLYCFHYEAAINSSAAESPEGKSDEK 120
Query: 99 --IRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQL 150
R +R IH G G+AI P TP +L D+I ++ DM+L+MTV PGFGGQQ
Sbjct: 121 TSPRELIRYIHDQGMLAGIAIKPATPANVLFDLIESEDPKEKPDMVLVMTVEPGFGGQQF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ S +PK+ + + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 MASELPKVEELRKRY--PDLNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAKDPSEVI 238
Query: 211 KRLND 215
L +
Sbjct: 239 SLLRE 243
>gi|313112962|ref|ZP_07798606.1| ribulose-phosphate 3-epimerase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310624727|gb|EFQ08038.1| ribulose-phosphate 3-epimerase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 216
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+ PSIL+ADF +LG + + AGA+ +H+DVMDG FVPNISFG V++SL D+
Sbjct: 3 IVSPSILSADFGKLGADCRMVLDAGAQMLHYDVMDGHFVPNISFGVPVLKSLHKNLPDAF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+D HLMIS + AG + FH E I+ ++ + A+G K G+ I P T
Sbjct: 63 YDVHLMISHPLQYAEAFIKAGATLYNFHLECEDDIQATIDAVRALGCKVGLTIKPGTEPQ 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L +D++D++L+M+V PGFGGQ+ + S + K+R KA R LEVDGGV +
Sbjct: 123 ALAPYLDQLDLVLVMSVEPGFGGQKFMPSALDKLRWLKAEREARGAHYLLEVDGGVDNAT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
V+AGAD+LV GS+ F + + L L
Sbjct: 183 APQCVEAGADILVAGSAVFGAADPAAAVQHLVSL 216
>gi|242003727|ref|XP_002422838.1| Ribulose-phosphate 3-epimerase, putative [Pediculus humanus
corporis]
gi|212505708|gb|EEB10100.1| Ribulose-phosphate 3-epimerase, putative [Pediculus humanus
corporis]
Length = 234
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 5/212 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSV 64
QI PS+L AD S+L EE + GA +H DVMDG FVPNI+FG VI+ LR ++
Sbjct: 15 QIGPSVLCADLSQLYEESEKLLSCGADYLHLDVMDGHFVPNITFGHPVIKCLRNKIKNAF 74
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPETP 122
F+ H+M+S+ I ADAG + TFH E I R I G K G+A+ P TP
Sbjct: 75 FESHMMVSNPLQWIEPTADAGVNQYTFHVEPCNKNEIEDICRKIRECGMKVGLALKPGTP 134
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
++++++ ID D++LIMTV PGFGGQ+ + + + K++ + +++EVDGGV
Sbjct: 135 ISVIQNYIDYADLVLIMTVEPGFGGQKFMSNMMEKVKLLRQ--ANPGLNIEVDGGVGPNT 192
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ +AGA+ +V G++ N K +L
Sbjct: 193 IEQCAKAGANWIVSGTAVTNSKNPGDVINQLR 224
>gi|317494393|ref|ZP_07952807.1| ribulose-phosphate 3-epimerase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917643|gb|EFV38988.1| ribulose-phosphate 3-epimerase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 227
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 98/217 (45%), Positives = 142/217 (65%), Gaps = 4/217 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + + +GA +HFDVMD +VPN++ G V ++LR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKVLASGADVVHFDVMDNHYVPNLTIGPMVCKALRDYGITAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG II+FHPE+S H+ RSL+ I ++G K G+ NP T ++
Sbjct: 66 DVHLMVKPVDRIIPDFAEAGASIISFHPEASEHVDRSLQLIKSLGCKAGLVFNPATSLSY 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V+D++D+IL+M+VNPGFGGQ I +T+ K+RQ + LI R I LEVDGGV NI
Sbjct: 126 LEYVMDKVDVILLMSVNPGFGGQSFIPATLDKLRQVRKLIDASGRDIRLEVDGGVKVDNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
++ AGAD+ V GS+ F ++ ++ K+
Sbjct: 186 GAIAAAGADMFVAGSAIFGHPDYEQIITQMRGEIAKA 222
>gi|196229999|ref|ZP_03128862.1| Ribulose-phosphate 3-epimerase [Chthoniobacter flavus Ellin428]
gi|196225596|gb|EDY20103.1| Ribulose-phosphate 3-epimerase [Chthoniobacter flavus Ellin428]
Length = 218
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 113/215 (52%), Gaps = 3/215 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
SI I PSILA DF RL EE+ AGA +H DVMDG FV NISFG + + +
Sbjct: 3 AHSIVIAPSILACDFGRLHEEVRRAEAAGADWLHLDVMDGHFVDNISFGPAFVDFVAKVA 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ D + + + IT H E+ +R++L I MG+ G+++ P T
Sbjct: 63 TVPLDVHLMVERPDHYFPRFVKSAAN-ITVHVEAQHDVRKTLAGIREMGRTCGLSLRPAT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
P + +D+ID++L+MTV PGFGGQ + + K++ A+ + +EVDGG+
Sbjct: 122 PFEAVVPYLDQIDLLLVMTVVPGFGGQPFMPEMLTKVQDARDRRERLGMKYRIEVDGGIN 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGAD V G+S F +++
Sbjct: 182 EKTAAQTREAGADTFVAGTSVFAAPDMAEAMRKVR 216
>gi|195332161|ref|XP_002032767.1| GM20778 [Drosophila sechellia]
gi|194124737|gb|EDW46780.1| GM20778 [Drosophila sechellia]
Length = 221
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M +I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR
Sbjct: 1 MPVQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I +ADAG ++ TFH E + R R + G K G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRKVQESGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V LE + D++L+MTV PGFGGQ + +PK++ + ++ +EVDGGV
Sbjct: 121 GTEVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRE--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+++V G++ + K L D+ S L
Sbjct: 179 PKTIHCCAEAGANMIVSGTAVVGASDQSQVIKELRDVVHSYL 220
>gi|332184341|gb|AEE26595.1| Ribulose-phosphate 3-epimerase [Francisella cf. novicida 3523]
Length = 222
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 134/219 (61%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y
Sbjct: 1 MKHIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G K G+A+NP
Sbjct: 61 ITAGMDVHLMVKPVDNLIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
T + L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 121 TGIDCLKYVESHIDRVLIMSVNPGFGGQKFIPAMLDKAKEVSQWIKSTARDILLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 181 NPHNIAEIAACGVNAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|301118582|ref|XP_002907019.1| ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]
gi|262108368|gb|EEY66420.1| ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]
Length = 232
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+LA+D S L +E + AGA +H DVMDG FVPNIS+G VI+SLR ++ +
Sbjct: 6 TCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTKA 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FDCH+M+S + + IA AG D TFH E++ ++ I G K G+AI P T
Sbjct: 66 FFDCHMMVSKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+D +DM+L+MTV PGFGGQ + + K++ +A ++ +EVDGG+ I
Sbjct: 126 EAAFPYVDLVDMVLVMTVEPGFGGQSFMTDMMTKVKIIRA--KYPALDIEVDGGLGPSTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGA+++V GSS F + + ++
Sbjct: 184 DAAAKAGANMIVAGSSVFKAEDLTAVILQMR 214
>gi|254556529|ref|YP_003062946.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum JDM1]
gi|254045456|gb|ACT62249.1| ribulose-phosphate 3-epimerase [Lactobacillus plantarum JDM1]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ L ++ AGA +H DVMDG FVPN+SFG + LR + +
Sbjct: 2 IKVAPSILSADFANLQRDVQMAENAGADALHIDVMDGQFVPNLSFGMSTVADLRPVTSLM 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + + A AG D+I H ES+ HI +L+ I G K V +NP TP++
Sbjct: 62 LDCHLMIMDPERFVGQFAKAGADLIGVHVESTRHIYHALQLIKDAGVKAEVVVNPGTPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ +++ +D +LIMTVNPGFGGQ ++ + KI L + +EVDGG+ +
Sbjct: 122 MISELLPLVDQVLIMTVNPGFGGQHFLDQMVAKIAALNELKQQHGYQFEIEVDGGINDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K+ AGA + V GS ++ A+R+ DLK
Sbjct: 182 VKACYDAGATVAVAGSYVYDSADP---AQRIQDLK 213
>gi|256379227|ref|YP_003102887.1| ribulose-phosphate 3-epimerase [Actinosynnema mirum DSM 43827]
gi|255923530|gb|ACU39041.1| ribulose-phosphate 3-epimerase [Actinosynnema mirum DSM 43827]
Length = 216
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+RL +E + + +GA +H DVMD FVPN++ G V++SLR +D
Sbjct: 1 MIAPSILSADFARLADEAAAV--SGADWLHVDVMDAHFVPNLTLGLPVVKSLRKATDIPL 58
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI D A+AG +T H E++ + + + A G + G++I P T +
Sbjct: 59 DCHLMIEDPDRWAIGYAEAGAHNVTVHAEAAADPVKLAKDLRAAGSRAGLSIKPGTSLDS 118
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ DV+ D +L+M+V PGFGGQ + + K+R A+ L+ + +E+DGG+ + I
Sbjct: 119 VVDVLKHYDTLLVMSVEPGFGGQSFMPEVLDKVRTARNLVDTGHLKLVIEIDGGINADTI 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AG D V GS+ ++ + L L +A
Sbjct: 179 AQAAEAGVDCFVSGSAVYDAADPAKALESLRGLAAAA 215
>gi|219683793|ref|YP_002470176.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis AD011]
gi|219621443|gb|ACL29600.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis AD011]
gi|289178566|gb|ADC85812.1| Ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis BB-12]
Length = 224
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 82/224 (36%), Positives = 129/224 (57%), Gaps = 7/224 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I+I PSIL+ADF L ++ I + A +H DVMD FVPN++ G V++ + +
Sbjct: 3 TMDIKIAPSILSADFCNLERDLERI--SNADMVHVDVMDHHFVPNLTIGEPVVKRICEVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A+ G +TFH ++ R R +H MG + A+ P
Sbjct: 61 DLPVDVHLMIDDPDRWAPGYAERGAHSVTFHMGATHAPVRLARQLHDMGCEAWFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D+++E D ILIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV+
Sbjct: 121 PVEPIFDILEEFDTILIMTVEPGFGGQKFLANQMGKVRRLRDEITRRGLDTNIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ ++ QAGA++LV GS+ + AK +N+++ +A A
Sbjct: 181 PKTAATVAQAGANILVAGSAVYGAADP---AKAINEIRDTAAAA 221
>gi|261493134|ref|ZP_05989669.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495779|ref|ZP_05992215.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308544|gb|EEY09811.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311189|gb|EEY12357.1| ribulose-phosphate 3-epimerase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 225
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 95/223 (42%), Positives = 146/223 (65%), Gaps = 5/223 (2%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ I PSIL+AD +RLG++++ + KAGA IHFDVMD +VPN++FG + ++LR
Sbjct: 1 MSKNPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHYVPNLTFGPAICKALRD 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
Y D HLM+ ++ I A AG D ITFHPE++ HI R+L+ I +G K+G+ N
Sbjct: 61 YGIQCPIDVHLMVKPVERLIPDFAKAGADYITFHPEATEHIDRNLQLIRDLGCKSGLVFN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDG 176
P TP++ L+ V+D++D++L+M+VNPGFGGQ I ST+ K+++ + I + ++ EVDG
Sbjct: 121 PATPLSYLDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKLKEVRRRIDESGYNIRLEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND-LKK 218
G+ NI + AGAD+ V GS+ F+Q + ++ D L+K
Sbjct: 181 GMKINNIADIAAAGADMFVAGSAIFDQPDYQAVIAQMRDELRK 223
>gi|226366357|ref|YP_002784140.1| ribulose-phosphate 3-epimerase [Rhodococcus opacus B4]
gi|226244847|dbj|BAH55195.1| ribulose-5-phosphate 3-epimerase [Rhodococcus opacus B4]
Length = 227
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL+ADF+RL EE + AGA +H DVMD FVPN++ G V+ SL +
Sbjct: 1 MATPM-IAPSILSADFARLAEEADAV--AGADWLHVDVMDAHFVPNLTLGLPVVTSLLAA 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D DCHLMI A+AG +TFH E++ R R I A G K G+++ P
Sbjct: 58 TDIPLDCHLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPRSVARDIRAAGAKAGLSVKPG 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TP+ +++ + D +L+M+V PGFGGQ I + K + + L+ + + +E+DGG+
Sbjct: 118 TPIEPYLEILKDFDTLLVMSVEPGFGGQSFIPEVLSKAKAVRRLVDSGELRLVVEIDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
S +++ +AG D V GS+ + + L A
Sbjct: 178 NSDTVEAAAEAGVDCFVAGSAVYGTGDPAEAVRALRASAAKA 219
>gi|227530544|ref|ZP_03960593.1| ribulose-phosphate 3-epimerase [Lactobacillus vaginalis ATCC 49540]
gi|227349550|gb|EEJ39841.1| ribulose-phosphate 3-epimerase [Lactobacillus vaginalis ATCC 49540]
Length = 217
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 133/217 (61%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L +I + KAGA+ +H DVMDG FVP+IS+G ++++R + V
Sbjct: 2 IKVAPSILSADYVNLQRDIEKVDKAGAEYLHIDVMDGSFVPSISYGPGFVKAIRPITKMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+ + + + DAG DII E++ HI R+L+ I G K V INP TPVA
Sbjct: 62 LDCHLMVQNPEHILPAFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++E V+ +D +L+MTVNPGFGGQ+ + T+ KI Q + + +EVDGGV ++
Sbjct: 122 MIEPVLHMVDQVLVMTVNPGFGGQKFLPETVEKIAQLNQIKKNKGYDFDIEVDGGVNNQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGA + V GS +N AKR+ L+ +
Sbjct: 182 VVDCYKAGATVAVAGSYVYNVDDP---AKRIQALRDA 215
>gi|227547224|ref|ZP_03977273.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212344|gb|EEI80240.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 222
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 7/224 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G I+FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLREMGCKACFAVRPTE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + +AGAD+LV GS+ + + A+ ++D++ A A
Sbjct: 179 PKTAHIVAEAGADVLVAGSAVYGAENP---AQAIDDIRTKAEAA 219
>gi|24586301|ref|NP_610298.2| CG30499 [Drosophila melanogaster]
gi|16768878|gb|AAL28658.1| LD09559p [Drosophila melanogaster]
gi|21645589|gb|AAM71098.1| CG30499 [Drosophila melanogaster]
gi|220942676|gb|ACL83881.1| CG30499-PA [synthetic construct]
gi|220952920|gb|ACL89003.1| CG30499-PA [synthetic construct]
Length = 221
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M +I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR
Sbjct: 1 MPVQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I +ADAG ++ TFH E + R R + G K G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V LE + D++L+MTV PGFGGQ + +PK++ + ++ +EVDGGV
Sbjct: 121 GTEVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPKVKWLRE--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+++V G++ + K L D+ S L
Sbjct: 179 PKTIHCCAEAGANMIVSGTAVVGASDQSQVIKELRDVVHSYL 220
>gi|325662237|ref|ZP_08150852.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086038|ref|ZP_08335121.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471489|gb|EGC74710.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406961|gb|EGG86466.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 220
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 142/216 (65%), Gaps = 2/216 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + PSILAADF++LGE++ + GA+ IHFDVMDG FVP+ISFG V+ S+R+ D
Sbjct: 2 EMILAPSILAADFTKLGEQMKETEREGAQYIHFDVMDGKFVPSISFGMPVLASIRNAVDQ 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI ++ AG DIIT H E+ ++ +L I A G K ++I P+TPV
Sbjct: 62 IFDVHLMIEEPIRYVEEFQKAGADIITVHLEACSDVKATLEKIKACGAKAAISICPDTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
A LE ++ +DM+LIM+V+PGFGGQ I S++ KIR+ +AL+ + + +EVDGG+ +
Sbjct: 122 AELEPYVELVDMVLIMSVHPGFGGQSFIPSSLEKIRETRALLDRVNSTADIEVDGGIYTT 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N++ +++AGA+++V GS+ F + + L+
Sbjct: 182 NVREVLEAGANVIVAGSAIFRGDAAENTKNMMEILR 217
>gi|308234679|ref|ZP_07665416.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis ATCC 14018]
Length = 221
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G +++ + +
Sbjct: 2 NIQIAPSILSADFCNLERDLIAI--SNADLVHVDVMDHHFVPNLTLGEPIVKRICEVTSL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G D ++FH ++ R R + MG K+ A+ P PV
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGADSVSFHMGATHAPVRLARQLRDMGCKSCFAVRPAEPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV+
Sbjct: 120 EPIFDILDEFDMILIMTVEPGFGGQKFLSNQMGKVRRLRDEITRRGLDTHIQVDGGVSPS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + + + ++ + A
Sbjct: 180 TAAIVAEAGADVLVAGSAVYGAENPSAAIDSIRNIAQEA 218
>gi|153815681|ref|ZP_01968349.1| hypothetical protein RUMTOR_01917 [Ruminococcus torques ATCC 27756]
gi|331088254|ref|ZP_08337173.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846922|gb|EDK23840.1| hypothetical protein RUMTOR_01917 [Ruminococcus torques ATCC 27756]
gi|330408498|gb|EGG87964.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
3_1_46FAA]
Length = 220
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF LGE+I KAGAK IHFDVMDG FVP+ISFG V+ +L+
Sbjct: 4 ILAPSILSADFKILGEQIEQTEKAGAKYIHFDVMDGIFVPSISFGMPVLSALKGAVKQAL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ ++ A G DIIT H E+ ++ ++ I A G K G+ I P TPV
Sbjct: 64 DVHLMVTEPIRYVKEFAKCGADIITVHLEACEDVKATVDEIKASGVKAGITIKPATPVKE 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L ++ DM LIM+V PGFGGQ I ++ KI++ + L+ +R + +EVDGG+ N+
Sbjct: 124 LIPYLELADMFLIMSVEPGFGGQAFIPESLDKIKELRTLLDERGLKTDIEVDGGIYCENV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++++ AGA+++V GS F + + + LK+
Sbjct: 184 EAVLDAGANIIVSGSGVFKGNITENTKRFMEILKR 218
>gi|261337791|ref|ZP_05965675.1| ribulose-phosphate 3-epimerase [Bifidobacterium gallicum DSM 20093]
gi|270277244|gb|EFA23098.1| ribulose-phosphate 3-epimerase [Bifidobacterium gallicum DSM 20093]
Length = 222
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 5/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +IQI PSIL+ADF L +++ I A A +H DVMD FVPN++ G +++ +
Sbjct: 1 MT-AIQIAPSILSADFCNLERDLNRI--ANADLVHVDVMDHHFVPNLTMGEPIVQRICEV 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D A G +TFH ++ R R +H MG + A+ P
Sbjct: 58 TPVPADVHLMIEDPDRWAPEFAKLGAKSVTFHMGATHAPVRLARQLHDMGCEACFAVRPA 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
PV + D+++E D ILIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV
Sbjct: 118 EPVEPIFDILEEFDTILIMTVEPGFGGQKFLGNQMDKVRRLRDEITRRGLKTNIQVDGGV 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + AGA++LV GS+ + ++ + ++A
Sbjct: 178 SPSTAPIVAAAGANILVAGSAVYGADDPAVAIDQIREAAQAA 219
>gi|190576139|ref|YP_001973984.1| ribulose-phosphate 3-epimerase [Stenotrophomonas maltophilia K279a]
gi|190014061|emb|CAQ47701.1| putative ribulose-phosphate 3-epimerase [Stenotrophomonas
maltophilia K279a]
Length = 224
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 144/220 (65%), Gaps = 5/220 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+A+F+RLGEE+ N+ AGA +HFDVMD +VPN++ G V ++LR + +
Sbjct: 6 IAPSILSANFARLGEEVDNVLAAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHGVTAPI 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +D I A+AG I+FHPE+S H+ R+++ I ++G K G+ +NP TPV I
Sbjct: 66 DVHLMVEPVDRIIPDFAEAGATYISFHPEASRHVHRTIQLIRSLGCKPGIVLNPATPVDI 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D++D++L+M+VNPGFGGQ I S + K++ + +I + I LE+DGGV + NI
Sbjct: 126 LDWVLDDLDLVLLMSVNPGFGGQAFIPSALDKLKVVRKMIDASGKDIRLEIDGGVKADNI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ AGAD V GS+ FN K SY + ++ + A
Sbjct: 186 GEIAAAGADTFVAGSAIFNAK--TSYQDVIAQMRANVAAA 223
>gi|212715807|ref|ZP_03323935.1| hypothetical protein BIFCAT_00708 [Bifidobacterium catenulatum DSM
16992]
gi|212661174|gb|EEB21749.1| hypothetical protein BIFCAT_00708 [Bifidobacterium catenulatum DSM
16992]
Length = 224
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 123/221 (55%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +
Sbjct: 3 AMTIQIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVGRICEVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 61 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRTMGCKACFAVRPAE 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 121 PVEPIFDILDEFDMILIMTVEPGFGGQRFLDNQMSKVRRLRDEITRRGLATKIQVDGGVS 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + + ++A
Sbjct: 181 PKTAHIVAEAGADVLVAGSAVYGAENPAEAIDSIREKAEAA 221
>gi|254829108|ref|ZP_05233795.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258601519|gb|EEW14844.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
Length = 214
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++ HI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAASHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ V+ ++D++L MTVNPGFGGQ I+STI +R K S +EVDGGV + +
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDNWRRKNHGSYVIEVDGGVNAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF + + + L
Sbjct: 184 KCKQAGVDILVAGSYFFGATDKAACIQGLKK 214
>gi|119470436|ref|ZP_01613164.1| D-ribulose-5-phosphate 3-epimerase [Alteromonadales bacterium TW-7]
gi|119446361|gb|EAW27637.1| D-ribulose-5-phosphate 3-epimerase [Alteromonadales bacterium TW-7]
Length = 227
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 102/225 (45%), Positives = 144/225 (64%), Gaps = 6/225 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF++LGE++ ++ AGA +HFDVMD +VPN++ G V ++LR Y
Sbjct: 5 EQKYLIAPSILSADFAKLGEDVDSVLAAGADVVHFDVMDNHYVPNLTIGPMVCKALRDYG 64
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +DS I A+AG IITFHPE+S HI R+++ I G K G+ NP
Sbjct: 65 ITAPIDVHLMVKPVDSIIPQFAEAGASIITFHPEASEHIDRTIQLIKDHGCKAGLVFNPA 124
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T ++ L+ VID++D IL+M+VNPGFGGQ I T+ K+ QAK I + R I LEVDGG+
Sbjct: 125 TSLSYLDHVIDKLDTILLMSVNPGFGGQSFIPHTLKKLAQAKQRIVESGRDIRLEVDGGI 184
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI + QAGAD+ V GS+ FNQ Y ++ ++K ++
Sbjct: 185 KVDNIAAAAQAGADMFVAGSAIFNQPD---YKVVVDQMRKQLESV 226
>gi|224417707|ref|ZP_03655713.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
gi|253827055|ref|ZP_04869940.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
gi|313141249|ref|ZP_07803442.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
gi|253510461|gb|EES89120.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
gi|313130280|gb|EFR47897.1| ribulose-phosphate 3-epimerase [Helicobacter canadensis MIT
98-5491]
Length = 211
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 128/215 (59%), Gaps = 6/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L EEI I +AG IH DVMDG FVPN++ G ++ S+ +
Sbjct: 1 MLVAPSILSADFGKLNEEIKAICEAGCDLIHIDVMDGHFVPNLTMGPMIVSSVAKIATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A ++FH E H R ++ I G + +NP T +
Sbjct: 61 LDIHLMVQNNSFFVDLFAPLKPKYLSFHIEEEKHANRLVQKIRDYGISPAIVLNPHTTLE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++ +DM+L+M+VNPGFGGQ+ I + + KI+ K I R+ +EVDGGV+ +N
Sbjct: 121 SIDYLLEYVDMVLLMSVNPGFGGQKFIPNILEKIKYLKDKIELRNPRCLIEVDGGVSDKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I L ++G D++V GS FN +Y +R+N LK
Sbjct: 181 IMELKESGVDIVVAGSYVFNG----NYKERINSLK 211
>gi|107024114|ref|YP_622441.1| ribulose-phosphate 3-epimerase [Burkholderia cenocepacia AU 1054]
gi|116688560|ref|YP_834183.1| ribulose-phosphate 3-epimerase [Burkholderia cenocepacia HI2424]
gi|105894303|gb|ABF77468.1| ribulose-5-phosphate 3-epimerase [Burkholderia cenocepacia AU 1054]
gi|116646649|gb|ABK07290.1| ribulose-5-phosphate 3-epimerase [Burkholderia cenocepacia HI2424]
Length = 228
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 142/230 (61%), Gaps = 10/230 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +
Sbjct: 1 MT-QFRIAPSILSADFARLGEEVRNVVAAGADWIHFDVMDNHYVPNLTIGPLVCEAIRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D + A AG ++I+FHPE S HI R+L I G K G+ NP
Sbjct: 60 VQVPIDVHLMVRPVDRIVPDFAKAGANLISFHPEGSDHIDRTLSLIRDHGCKAGLVFNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEV 174
TP+ L+ V+D +D +L+M+VNPGFGGQ I T+ K+R+A+A I R I LEV
Sbjct: 120 TPLNYLDHVMDRLDFVLLMSVNPGFGGQSFIPETLNKLREARARIDAYTERTGREILLEV 179
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
DGGV + NI + AGAD V GS+ F + Y K +++++ + ++
Sbjct: 180 DGGVKADNIAEIAAAGADAFVAGSAIFGKPD---YRKVIDEMRAALATVE 226
>gi|312139592|ref|YP_004006928.1| ribulose-phosphate 3-epimerase [Rhodococcus equi 103S]
gi|325672524|ref|ZP_08152220.1| ribulose-phosphate 3-epimerase [Rhodococcus equi ATCC 33707]
gi|311888931|emb|CBH48244.1| ribulose-phosphate 3-epimerase [Rhodococcus equi 103S]
gi|325556401|gb|EGD26067.1| ribulose-phosphate 3-epimerase [Rhodococcus equi ATCC 33707]
Length = 223
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+RL EE + AGA +H DVMD FVPN++ G V++SL +D
Sbjct: 1 MIAPSILSADFARLAEEADAV--AGADWLHVDVMDAHFVPNLTLGLPVVQSLLKATDIPL 58
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI A+AG +TFH E++ R I A G K G++I P TP+
Sbjct: 59 DCHLMIDDPGRWAPPYAEAGAHNVTFHAEATDDPISVARDIRAAGAKAGLSIKPNTPIEP 118
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+++ D +L+M+V PGFGGQ I + + K R + L+ + + +E+DGG+ + +
Sbjct: 119 YLEILKSFDTLLVMSVEPGFGGQSFIPAVLDKARAVRKLVDAGELRLLVEIDGGINADTV 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG D V GS+ + + + L + A
Sbjct: 179 EQAAEAGIDCFVAGSAVYGAADPAAAVRGLREQAAKA 215
>gi|219879828|ref|NP_001137381.1| rcRPE protein [Homo sapiens]
gi|83674972|gb|ABC40667.1| rcRPE [Homo sapiens]
gi|119570040|gb|EAW49655.1| hCG2024410 [Homo sapiens]
gi|187952553|gb|AAI37244.1| LOC729020 protein [Homo sapiens]
gi|187953497|gb|AAI37243.1| LOC729020 protein [Homo sapiens]
gi|187956822|gb|AAI57830.1| LOC729020 protein [Homo sapiens]
gi|187957322|gb|AAI57876.1| LOC729020 protein [Homo sapiens]
gi|219521031|gb|AAI71885.1| LOC729020 protein [Homo sapiens]
gi|219521137|gb|AAI71806.1| LOC729020 protein [Homo sapiens]
Length = 228
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG + + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAKCLQMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A A + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFG Q+ +E +PK+ + S+ +E DGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQF--PSLDIEGDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
S + +AGA++ V GS+ + S L ++
Sbjct: 179 GSDTVHKCAEAGANMTVSGSAIMRSEDPRSVINLLRNI 216
>gi|188585968|ref|YP_001917513.1| ribulose-5-phosphate 3-epimerase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350655|gb|ACB84925.1| ribulose-5-phosphate 3-epimerase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 224
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+AD +L E+I + AGA IH DVMDG FVPNI+ G ++ +L+ + D
Sbjct: 5 VAPSILSADLLKLEEQIKAVEAAGADMIHVDVMDGRFVPNITMGPKIVEALKRITSIPCD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I+ A AG DI+T H E+S H+ R++ I A K GV++NP TP+ +
Sbjct: 65 VHLMIEEPEKYIDKFAQAGADILTIHQEASLHLDRNIEAITAHDIKAGVSLNPATPLEQI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNIK 184
+ V+ ++D +L+M+VNPGFGGQ+ I KI + GK S ++VDGG+ N K
Sbjct: 125 KWVLPKLDQVLLMSVNPGFGGQKYIPYVSGKISDLDKIRKAGKYSFMIQVDGGINHSNAK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ +GAD+LV GS+ F+ K + A +L
Sbjct: 185 QVLDSGADILVAGSAIFSSKLGLEQAIKL 213
>gi|183601674|ref|ZP_02963044.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis HN019]
gi|241190827|ref|YP_002968221.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196233|ref|YP_002969788.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183219280|gb|EDT89921.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis HN019]
gi|240249219|gb|ACS46159.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250787|gb|ACS47726.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295793816|gb|ADG33351.1| ribulose-phosphate 3-epimerase [Bifidobacterium animalis subsp.
lactis V9]
Length = 221
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 81/221 (36%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF L ++ I + A +H DVMD FVPN++ G V++ + +D
Sbjct: 3 IKIAPSILSADFCNLERDLERI--SNADMVHVDVMDHHFVPNLTIGEPVVKRICEVTDLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D A+ G +TFH ++ R R +H MG + A+ P PV
Sbjct: 61 VDVHLMIDDPDRWAPGYAERGAHSVTFHMGATHAPVRLARQLHDMGCEAWFAVRPAEPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ D+++E D ILIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV+ +
Sbjct: 121 PIFDILEEFDTILIMTVEPGFGGQKFLANQMGKVRRLRDEITRRGLDTNIQVDGGVSPKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++ QAGA++LV GS+ + AK +N+++ +A A
Sbjct: 181 AATVAQAGANILVAGSAVYGAADP---AKAINEIRDTAAAA 218
>gi|162456472|ref|YP_001618839.1| ribulose-phosphate 3-epimerase [Sorangium cellulosum 'So ce 56']
gi|161167054|emb|CAN98359.1| Ribulose-phosphate 3-epimerase [Sorangium cellulosum 'So ce 56']
Length = 237
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 129/229 (56%), Gaps = 12/229 (5%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PSIL+ADF RL EE+ AGA IH DVMDG FVPNI+ G V+R++R+ +
Sbjct: 5 KIIVAPSILSADFGRLAEEVRAAEAAGADWIHVDVMDGRFVPNITIGPLVVRAVRAATRL 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + ++ A AG D I+ H E+SPH+ R+L+ I G GV +NP TP
Sbjct: 65 PLDVHLMIVEPERYVAEFAAAGADRISVHVEASPHLHRTLQQIRDAGASPGVVLNPHTPE 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
+ V+ +ID++L+M+VNPGFGGQ+ I + K+R + I + + + EVDGGV
Sbjct: 125 ESIRHVMADIDLVLVMSVNPGFGGQRFIPEALTKLRTLRQTIDQAGLDIALEVDGGVAPS 184
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGE----------ISYAKRLNDLKKSA 220
++ AGA LV GS+ F YA+ + L+ A
Sbjct: 185 TAGQVIAAGARALVAGSAVFGAVARGEDLPFDVRVARYAEAIGALRAPA 233
>gi|332670475|ref|YP_004453483.1| ribulose-phosphate 3-epimerase [Cellulomonas fimi ATCC 484]
gi|332339513|gb|AEE46096.1| ribulose-phosphate 3-epimerase [Cellulomonas fimi ATCC 484]
Length = 219
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 88/219 (40%), Positives = 122/219 (55%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL+ADF+ L +++ I A A H DVMD FVPN++ G V+R L S
Sbjct: 2 SALINPSILSADFANLERDLARI--ATADWAHVDVMDNHFVPNLTIGLPVVRRLAQVSPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A+AG +TFH E++ R R + + G + GVA+ P TPV
Sbjct: 60 PLDVHLMIDDADRWAPAFAEAGAGSVTFHAEAAQAPVRLARELRSAGVRVGVALRPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D++ EIDM+L+MTV PGFGGQ IE T+PK+R+ +A I + ++VDGGV
Sbjct: 120 EPFVDLLAEIDMVLVMTVEPGFGGQSFIEGTLPKVRRTRAAIDAAGLDTWVQVDGGVARD 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + AGA++ V GS+ + + L L +A
Sbjct: 180 TIGRIAAAGANVFVAGSAVYGADDVAGEIEALRALADAA 218
>gi|21672783|ref|NP_660850.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091192|sp|Q8K940|RPE_BUCAP RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|21623431|gb|AAM68061.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 228
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 87/207 (42%), Positives = 130/207 (62%), Gaps = 3/207 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ SIL+ADF+RLGE+ AG+ IHFDVMD +VPN++ G ++++LR+Y+
Sbjct: 1 MKKFFLASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYN 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D+ I A+AG D ITFHPES+ HI R+L I G K G+A+NP
Sbjct: 61 ITVPIDVHLMVKPVDNLIPQFAEAGADFITFHPESTDHIDRTLNLIKECGCKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
T + L+ V++++D+IL+M+VNPGFG Q + ++ K+R+ + I +I LEVDGGV
Sbjct: 121 TSLNFLDYVMEKLDLILLMSVNPGFGNQSFLPTSFNKLREVRKKIELNSSNILLEVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKG 205
NI + +GA++ V+GS F
Sbjct: 181 KLENISEVAFSGANVFVIGSGIFGYTD 207
>gi|294341882|emb|CAZ90311.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Thiomonas sp. 3As]
Length = 232
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 144/234 (61%), Gaps = 15/234 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V +++ Y
Sbjct: 1 MKTYRIAPSILSADFARLGEEVRNVIDAGADFIHFDVMDNHYVPNLTIGPLVAEAIKPYC 60
Query: 61 -----SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+ D HLM+ +D+ AG DI++FHPE+S H+ R+L+ I G K G+
Sbjct: 61 KKADGTPITLDVHLMVEPVDAIAQSFVKAGADIVSFHPEASKHVDRTLQMIRDGGAKAGL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RS 169
NP TP+++L+ V+D++D++L+M+VNPGFGGQ IES++PK +Q +A + R
Sbjct: 121 VFNPATPLSVLDYVMDKVDLVLLMSVNPGFGGQSFIESSLPKAKQVRAKLDAYKAQTGRD 180
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I LE+DGG+ NI + AG D V GS+ F + Y ++ ++ + A+
Sbjct: 181 ILLEIDGGIKPDNIAAAAAAGVDTFVAGSAIFGKPD---YKAVIDAMRANLAAV 231
>gi|118474962|ref|YP_892036.1| ribulose-phosphate 3-epimerase [Campylobacter fetus subsp. fetus
82-40]
gi|118414188|gb|ABK82608.1| ribulose-phosphate 3-epimerase [Campylobacter fetus subsp. fetus
82-40]
Length = 213
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L +E+ I +AGA +H DVMDG FVPN++ G V+ ++ S
Sbjct: 1 MYVAPSILSADFGKLDDEVKAICEAGADLVHIDVMDGHFVPNLTVGPLVVNAVAKSSSKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ +++ ++FH E H R + I G + +NP TPV+
Sbjct: 61 LDIHLMVENVPFFVDLFLPLKPKFLSFHIEEEKHPLRLIEYIRKNGVSPAIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE +I+E+DM+L+M+VNPGFGGQ+ I S + KI++ + LI K +EVDGGV N
Sbjct: 121 SLEYIINEVDMVLLMSVNPGFGGQKFIPSVLKKIKELRDLIEKNGAKCMIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ L +AG D++V G+ F+ K L
Sbjct: 181 VSELDEAGVDIVVAGNFVFSSNDYEQAIKALK 212
>gi|296117962|ref|ZP_06836545.1| ribulose-phosphate 3-epimerase [Corynebacterium ammoniagenes DSM
20306]
gi|295969193|gb|EFG82435.1| ribulose-phosphate 3-epimerase [Corynebacterium ammoniagenes DSM
20306]
Length = 230
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 80/217 (36%), Positives = 124/217 (57%), Gaps = 7/217 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSILAADF+RLGEE++ + + A IH D+MDG FVPN+SFG D+ ++ ++ V
Sbjct: 13 IISPSILAADFTRLGEEVATV--SNADWIHVDIMDGHFVPNLSFGPDITAAVDGITEQVL 70
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR---TIHAMGKKTGVAINPETP 122
D HLMI + + A AG D I FH E+ + +L I +G + G +I P TP
Sbjct: 71 DVHLMIEEPEKWVETYAKAGADCIIFHVEAVEDEQAALDLAAKIRGLGVRAGFSIKPNTP 130
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
+ D + D++L+M+V PGFGGQ+ + + K+R +A I ++ + +E+DGG+++
Sbjct: 131 IEPWLDKLSHFDLVLVMSVEPGFGGQKFMPEMLDKVRALRAAIDEQQLPMLIEIDGGISA 190
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+ +AG D V GS+ F + + L L
Sbjct: 191 DTIRQSAEAGCDAFVAGSAIFKKDDRAAEVDNLRQLA 227
>gi|302672163|ref|YP_003832123.1| ribulose-phosphate 3-epimerase Rpe [Butyrivibrio proteoclasticus
B316]
gi|302396636|gb|ADL35541.1| ribulose-phosphate 3-epimerase Rpe [Butyrivibrio proteoclasticus
B316]
Length = 219
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 89/215 (41%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF+ LG++I + +AGA+ IH DVMDG FVP+IS+G VI+S+R + VF
Sbjct: 4 ILSPSILSADFNILGQQIREVDEAGAEYIHIDVMDGIFVPSISYGMPVIKSIRKTTQKVF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+MI+ +I A G DIITFH E++ + IH G K G++I P T V
Sbjct: 64 DVHIMITDPIRYIEEFAKVGADIITFHLEATDDAMAVIDKIHGCGIKAGISIKPGTAVEE 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L +D++DMIL+MTV PGFGGQ I +I ++++ + ++ +R + +EVDGG+ + N+
Sbjct: 124 LLPYLDKVDMILVMTVEPGFGGQSFIPESIGRVKKVRQMLQERGLTTDIEVDGGIYTENV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+++ AGA+++V GS F + K +N L+
Sbjct: 184 SNVLDAGANVIVSGSGVFKGNVSENVKKFINILQN 218
>gi|302498644|ref|XP_003011319.1| hypothetical protein ARB_02377 [Arthroderma benhamiae CBS 112371]
gi|291174869|gb|EFE30679.1| hypothetical protein ARB_02377 [Arthroderma benhamiae CBS 112371]
Length = 611
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 86/246 (34%), Positives = 129/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 360 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 419
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + DAGCD+ FH E++
Sbjct: 420 VQRPACAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVKSNAAKEPSDNTTTE 479
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH +G + G+AI PET V +L D++ + DM+L+MTVNPGFGGQ+
Sbjct: 480 KTSPKELIRYIHELGMQAGIAIKPETSVDVLWDILENKEAIERPDMVLVMTVNPGFGGQK 539
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 540 FMASELPKVQALRA--KYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAQNPAEV 597
Query: 210 AKRLND 215
+L +
Sbjct: 598 IAKLRE 603
>gi|256599950|pdb|3INP|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of D-Ribulose-
Phosphate 3-Epimerase From Francisella Tularensis
Length = 246
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 134/219 (61%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y
Sbjct: 25 MKHIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYG 84
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G + G+A+NP
Sbjct: 85 ITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPA 144
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
T + L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 145 TGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGV 204
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 205 NPYNIAEIAVCGVNAFVAGSAIFNSD---SYKQTIDKMR 240
>gi|241042414|ref|XP_002407056.1| D-ribulose-5-phosphate 3-epimerase, putative [Ixodes scapularis]
gi|215492090|gb|EEC01731.1| D-ribulose-5-phosphate 3-epimerase, putative [Ixodes scapularis]
Length = 236
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 80/219 (36%), Positives = 125/219 (57%), Gaps = 9/219 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
+ +I PSIL AD + + EE + ++GA +H DVMDG FVPN++FG V++ L+
Sbjct: 7 TCKIGPSILNADLANIYEESQKLLESGADYLHLDVMDGHFVPNLTFGHPVVKCLKSKLPK 66
Query: 63 SVFDCHLMIS------SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
+ FD H+M+ ++ +ADAG D TFH E++ +R I G K GV
Sbjct: 67 TFFDMHMMVRLTRFSAHTMQWVSPMADAGADQYTFHYEATSDPTGLVRKIREAGMKVGVG 126
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
I P TPV +L ++D++DM+LIMTV PGFGGQ + +PK++ ++ + + +EVDG
Sbjct: 127 IKPNTPVDVLLPLVDQVDMVLIMTVEPGFGGQSFMSDMMPKVQLLRSKF--KDLDIEVDG 184
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GV I+ QAGA+++V G++ + + L
Sbjct: 185 GVGPNTIQECAQAGANMIVSGTAITKSEDPREVIRTLRQ 223
>gi|301090345|ref|XP_002895391.1| ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]
gi|262099012|gb|EEY57064.1| ribulose-phosphate 3-epimerase [Phytophthora infestans T30-4]
Length = 232
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+LA+D S L +E + AGA +H DVMDG FVPNIS+G VI+SLR ++ +
Sbjct: 6 TCKIGPSLLASDLSCLKDESLKVVAAGADYLHLDVMDGHFVPNISWGPPVIKSLRPHTKA 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FDCH+M+ + + IA AG D TFH E++ ++ I G K G+AI P T
Sbjct: 66 FFDCHMMVFKPEQWVPDIAAAGGDQFTFHLEATQDPLALIKQIRDAGMKVGLAIKPGTSA 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+D +DM+L+MTV PGFGGQ + + K++ +A ++ +EVDGG+ I
Sbjct: 126 EAAFPYVDLVDMVLVMTVEPGFGGQSFMTDMMTKVKIIRA--KYPALDIEVDGGLGPSTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +AGA+++V GSS F + + ++
Sbjct: 184 DAAAKAGANMIVAGSSVFKAEDLTAVILQMR 214
>gi|239622170|ref|ZP_04665201.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|312132737|ref|YP_004000076.1| rpe [Bifidobacterium longum subsp. longum BBMN68]
gi|239515361|gb|EEQ55228.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|311773698|gb|ADQ03186.1| Rpe [Bifidobacterium longum subsp. longum BBMN68]
Length = 222
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 7/224 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G I+FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLREMGCKACFAVRPAE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + +AGAD+LV GS+ + + A+ ++D++ A A
Sbjct: 179 PKTAHIVAEAGADVLVAGSAVYGAENP---AQAIDDIRTKAEAA 219
>gi|332212720|ref|XP_003255467.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Nomascus
leucogenys]
Length = 228
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG F PNI+FG V+ SLR
Sbjct: 1 MVSGCKIGPSILNSDLANLGAEYLQMLDSGADYLHLDVMDGHFDPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + + AG + TFH E++ ++ ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMVIAGANQYTFHLEATENLGTLIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFG Q+ +E + K+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGRQKFMEDMMRKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AG +++V GS+ + S L +
Sbjct: 179 GPDTVHKCAEAGVNMIVSGSAIMRSEDPRSVINLLRN 215
>gi|23465331|ref|NP_695934.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum NCC2705]
gi|322689182|ref|YP_004208916.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis 157F]
gi|322691056|ref|YP_004220626.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|23325971|gb|AAN24570.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum NCC2705]
gi|320455912|dbj|BAJ66534.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320460518|dbj|BAJ71138.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis 157F]
Length = 222
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 7/224 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPAE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMSKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + +AGAD+LV GS+ + + A+ ++D++ A A
Sbjct: 179 PKTAHIVAEAGADVLVAGSAVYGAENP---AQAIDDIRTKAEAA 219
>gi|309790712|ref|ZP_07685262.1| ribulose-phosphate 3-epimerase [Oscillochloris trichoides DG6]
gi|308227243|gb|EFO80921.1| ribulose-phosphate 3-epimerase [Oscillochloris trichoides DG6]
Length = 222
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 149/221 (67%), Gaps = 8/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS- 63
+ I PSIL ADF+ +G+E++ I AG + +H DVMDG FVPNISFG +IRSLR ++
Sbjct: 1 MHIAPSILTADFAHMGDELTAIFDAGIRWLHLDVMDGRFVPNISFGPMLIRSLRPIAEQY 60
Query: 64 --VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLMI+ D ++ A AGC+ IT H E+ H+ R+++ I A+GKK GVA+NP T
Sbjct: 61 GVVLDAHLMIADPDRYVEEFAAAGCEYITVHAEACTHLHRTVQHIRALGKKPGVALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGV 178
P++ +E+V+ ++ + LIM+VNPGFGGQ+ I ++I KIR+ + ++ +R ++ L++DGGV
Sbjct: 121 PLSAIEEVLPDLSLALIMSVNPGFGGQRFIPASIDKIRRLRTMLDERGLNDVVLQIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I ++ AGA V GS+ + G + A+ + +L+++
Sbjct: 181 NKDLIAAVRDAGATCAVTGSAVY-APGR-NRAETVAELRQA 219
>gi|158604967|gb|ABW74782.1| ribulose-phosphate 3-epimerase [Campylobacter concisus 13826]
Length = 215
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF L EI I +AG +H DVMDG FVPN++ G V+ ++ +
Sbjct: 1 MYVAPSILSADFGNLAAEIRAICEAGCDLVHVDVMDGHFVPNLTIGPVVVSAVAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + ++ +TFH E H R + I G G+ +NP TPV+
Sbjct: 61 LDIHLMVENNSFFADLFLPLKPKFLTFHIEEEKHPMRLIDHIRKNGVSPGIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +IDE+DM+L+M+VNPGFGGQ+ + + K R +ALI +++ +EVDGGV N
Sbjct: 121 AIEHIIDEVDMVLLMSVNPGFGGQKFMPVVLEKTRALRALIERKNAKCLIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L +AGAD+LV GS F+ + +
Sbjct: 181 APDLEEAGADILVAGSYIFSSNSYEQAIRAIK 212
>gi|317501932|ref|ZP_07960116.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
8_1_57FAA]
gi|316896612|gb|EFV18699.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
8_1_57FAA]
Length = 220
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF LGE+I KAGAK IHFDVMDG FVP+ISFG V+ +L+
Sbjct: 4 ILAPSILSADFKILGEQIEQTEKAGAKYIHFDVMDGIFVPSISFGMPVLSALKGAVKQAL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ ++ A G DIIT H E+ ++ ++ I A G K G+ I P TPV
Sbjct: 64 DVHLMVTEPIRYVKEFAKCGADIITVHLEACEDVKATVDEIKASGVKAGITIKPATPVKE 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L ++ DM LIM+V PGFGGQ I ++ KI++ + L+ +R + +EVDGG+ N+
Sbjct: 124 LIPYLELADMFLIMSVEPGFGGQAFIPESLDKIKELRTLLDERGLKADIEVDGGIYCENV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++++ AGA+++V GS F + + + LK+
Sbjct: 184 EAVLDAGANIIVSGSGVFKGNITENTKRFMEILKR 218
>gi|311114697|ref|YP_003985918.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis ATCC 14019]
gi|310946191|gb|ADP38895.1| ribulose-phosphate 3-epimerase [Gardnerella vaginalis ATCC 14019]
Length = 224
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G +++ + +
Sbjct: 5 NIQIAPSILSADFCNLERDLIAI--SNADLVHVDVMDHHFVPNLTLGEPIVKRICEVTSL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G D ++FH ++ R R + MG K+ A+ P PV
Sbjct: 63 PVDVHLMIEDPDRWAPEYAKLGADSVSFHMGATHAPVRLARQLRDMGCKSCFAVRPAEPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ + + + K+R+ + I +R + ++VDGGV+
Sbjct: 123 EPIFDILDEFDMILIMTVEPGFGGQKFLSNQMGKVRRLRDEITRRGLDTHIQVDGGVSPS 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + + + + ++ + A
Sbjct: 183 TAAIVAEAGADVLVAGSAVYGAENPSAAIDSIRNIAQEA 221
>gi|326428717|gb|EGD74287.1| ribulose-phosphate 3-epimerase [Salpingoeca sp. ATCC 50818]
Length = 246
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEIS-NITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
Q+ PSILA+D S L + + + A +H D+MDG FVPN++ G V++ LR ++
Sbjct: 29 PAQVGPSILASDLSMLAADSKKAMEQWTADYLHVDIMDGHFVPNLTIGPPVVKCLRKHTT 88
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ DCHLM+S+ + + +A AG D TFH E++ + ++ G K G+ I P+TP
Sbjct: 89 AFLDCHLMVSNPEHWVKDMAAAGADRFTFHFEATNDADALIEEVNKTGMKCGMVIKPKTP 148
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V +L +D ID++LIMTV PGFGGQ + + K++ +A +++EVDGG+ +
Sbjct: 149 VDVLFPYLDRIDLVLIMTVEPGFGGQSFMVDMMDKVKTLRA--KSPKLNIEVDGGLNLKT 206
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA+++V GS+ F + + L D
Sbjct: 207 IDTAAKAGANMIVAGSAVFKAEDPKLVVQTLRD 239
>gi|260460237|ref|ZP_05808489.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
gi|259033882|gb|EEW35141.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
Length = 223
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 114/223 (51%), Positives = 158/223 (70%), Gaps = 1/223 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I I PS+L+ADFSRLGEE+ + AGA IH DVMDG FVPNI+FG VI+++R+
Sbjct: 1 MKQTI-IAPSVLSADFSRLGEEVEAVAAAGADWIHLDVMDGHFVPNITFGPAVIKAIRNR 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D VFDCHLMI+ D ++ AD GCDIIT H E+ H+ RSL+TI +GKK GV++NP
Sbjct: 60 TDKVFDCHLMITPADPYLAAFADVGCDIITVHAEAGVHLDRSLQTIRDLGKKAGVSLNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP ++E V+D +D++L+MTVNPGFGGQ I S + K+++ KA+IG R I +E+DGGVTS
Sbjct: 120 TPETVIEYVLDRLDLVLLMTVNPGFGGQAFIPSVVEKVKRVKAMIGDRPIDIEIDGGVTS 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ L AGA++LV GS+ F +Y+ + +++SA A
Sbjct: 180 QTAPLLASAGANVLVAGSAIFKGGTAAAYSANIAAIRQSADAA 222
>gi|109896987|ref|YP_660242.1| ribulose-phosphate 3-epimerase [Pseudoalteromonas atlantica T6c]
gi|109699268|gb|ABG39188.1| ribulose-5-phosphate 3-epimerase [Pseudoalteromonas atlantica T6c]
Length = 228
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 133/218 (61%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++ G + ++LR Y
Sbjct: 1 MRP-FLIAPSILSADFARLGAEVDAVLAAGADVIHFDVMDNHYVPNLTIGPMICKALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG +I+FHPE+S H+ RS++ I G K G+ +NP
Sbjct: 60 GVTADIDVHLMVEPVDEMIVSFAKAGASLISFHPEASRHVDRSIQLITDSGCKPGLVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
T + L+ + ++ IL+M+VNPGFGGQ I T+ K++ K ++ R I +E+DGG
Sbjct: 120 ATSLDCLDYTLHKLHHILLMSVNPGFGGQAFIPETLDKLQIVKKMVQACGRDIRIEIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V NI+++ +AGAD+ V GS+ FNQ +
Sbjct: 180 VKVDNIRAIAEAGADMFVAGSAIFNQPDYRQVIDAMRA 217
>gi|308804988|ref|XP_003079806.1| ribulose-phosphate 3-epimerase (IC) [Ostreococcus tauri]
gi|116058263|emb|CAL53452.1| ribulose-phosphate 3-epimerase (IC) [Ostreococcus tauri]
Length = 460
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 79/221 (35%), Positives = 130/221 (58%), Gaps = 11/221 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVF 65
I PS+L+ DF+R+ +E + GA +H DVMDG FVPN++FGA VI +LR + D+ F
Sbjct: 242 ISPSLLSCDFARMADESKKVIACGADWLHLDVMDGHFVPNLTFGAPVIAALRPHVPDAYF 301
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSP---HIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+++ + ++ +A AG ++ T+H E++ R I A G GVAI P T
Sbjct: 302 DVHLMVTNPEDYVEPMAKAGANMFTYHAETTKTAGEAAELCRKIRASGMHVGVAIKPATK 361
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
++ ++DE +DM+L+MTV PGFGGQ+ K++ + + ++VDGG+++
Sbjct: 362 AEVVFGLVDEGAVDMVLVMTVEPGFGGQKFNPECCAKVKTLRERF--PDLKIQVDGGLSA 419
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I +AGA+++V GSS F + + ++ L++ L
Sbjct: 420 STIDVAAEAGANVIVAGSSVFGS---ADWKQAIDVLREGVL 457
>gi|296137537|ref|YP_003644779.1| ribulose-phosphate 3-epimerase [Thiomonas intermedia K12]
gi|295797659|gb|ADG32449.1| ribulose-phosphate 3-epimerase [Thiomonas intermedia K12]
Length = 235
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 144/234 (61%), Gaps = 15/234 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+ +I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V +++ Y
Sbjct: 4 MKTYRIAPSILSADFARLGEEVRNVIDAGADFIHFDVMDNHYVPNLTIGPLVAEAIKPYC 63
Query: 61 -----SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+ D HLM+ +D+ AG DI++FHPE+S H+ R+L+ I G K G+
Sbjct: 64 KKADGTPITLDVHLMVEPVDAIAQSFVKAGADIVSFHPEASKHVDRTLQMIRDGGAKAGL 123
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RS 169
NP TP+++L+ V+D++D++L+M+VNPGFGGQ IES++PK +Q +A + R
Sbjct: 124 VFNPATPLSVLDYVMDKVDLVLLMSVNPGFGGQSFIESSLPKAKQVRAKLDAYKAQTGRD 183
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I LE+DGG+ NI + AG D V GS+ F + Y ++ ++ + A+
Sbjct: 184 ILLEIDGGIKPDNIAAAAAAGVDTFVAGSAIFGKPD---YKAVIDAMRANLAAV 234
>gi|315497068|ref|YP_004085872.1| ribulose-phosphate 3-epimerase [Asticcacaulis excentricus CB 48]
gi|315415080|gb|ADU11721.1| ribulose-phosphate 3-epimerase [Asticcacaulis excentricus CB 48]
Length = 219
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 142/219 (64%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + I PSILA+DFS+LGEE+ I AGA IH DVMDG FVPN++ G DV++SLR +
Sbjct: 1 MTTPL-ICPSILASDFSKLGEEVRAIDAAGADWIHIDVMDGHFVPNLTIGPDVVKSLRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLM++ +D ++ AG D ++ HPES PH+ R+L+ I +G K GV +NP
Sbjct: 60 TQKTFDVHLMVTPVDPYLEAFRAAGADYMSVHPESGPHLHRTLKQIRHLGAKAGVVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+ LE ++D++D+IL+M+VNPGFGGQ IES + KI + + L+VDGGV
Sbjct: 120 TPLDGLEWIMDDLDLILLMSVNPGFGGQSFIESQLRKIEAVRKKLDALGHPAVLQVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+N + V AGA LV G++ F G +YA + LK
Sbjct: 180 NLQNAAACVAAGATALVAGTAVFKG-GPDAYAANIKSLK 217
>gi|257055600|ref|YP_003133432.1| ribulose-phosphate 3-epimerase [Saccharomonospora viridis DSM
43017]
gi|256585472|gb|ACU96605.1| ribulose-5-phosphate 3-epimerase [Saccharomonospora viridis DSM
43017]
Length = 228
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 112/211 (53%), Gaps = 5/211 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAG---AKQIHFDVMDGCFVPNISFGADVIRSL 57
M I PSIL+ADF+ LG EI + +G A +H DVMDG FVPN++ G V+ SL
Sbjct: 1 MAHEPLIAPSILSADFADLGTEIDAVAGSGDARADWVHVDVMDGHFVPNLTIGLPVVESL 60
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+D DCHLMI D A+AG +T H E++ + + A G K G+AI
Sbjct: 61 LRRTDLPLDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAARDPVMLAKNLRAAGAKAGLAI 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVD 175
P TP+ D + D +LIM+V PGFGGQ I + K+R A+ L+ + L E+D
Sbjct: 121 KPNTPLEDYLDTLKHYDTLLIMSVEPGFGGQAFIPEVLDKVRTARRLVDTGHLKLLVEID 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
GG+ I+ +AG D V GS+ +
Sbjct: 181 GGINPDTIEQAAEAGVDCFVAGSAVYGADDP 211
>gi|116874024|ref|YP_850805.1| ribulose-phosphate 3-epimerase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742902|emb|CAK22026.1| ribulose-phosphate 3-epimerase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 214
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMETSIKEAEHAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++ ++D++L MTVNPGFGGQ I+STI + + S +EVDGG+ + +
Sbjct: 124 DAILADVDLVLQMTVNPGFGGQAFIDSTIQNMCYLDNWRRENHGSYVIEVDGGINAETAE 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF + + + L
Sbjct: 184 KCKQAGVDILVAGSYFFGANDKAACVQGLKK 214
>gi|23335099|ref|ZP_00120337.1| COG0036: Pentose-5-phosphate-3-epimerase [Bifidobacterium longum
DJO10A]
gi|189439343|ref|YP_001954424.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum DJO10A]
gi|189427778|gb|ACD97926.1| Pentose-5-phosphate-3-epimerase [Bifidobacterium longum DJO10A]
Length = 222
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 121/221 (54%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G I+FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLREMGCKACFAVRPAE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + ++A
Sbjct: 179 PKTAHIVAEAGADVLVAGSAVYGAENPAQAIDDIRAKAEAA 219
>gi|306836174|ref|ZP_07469158.1| ribulose-phosphate 3-epimerase [Corynebacterium accolens ATCC
49726]
gi|304567895|gb|EFM43476.1| ribulose-phosphate 3-epimerase [Corynebacterium accolens ATCC
49726]
Length = 231
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 7/221 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ I PSILAADF+RLGE++ I + A IH D+MDG FVPN+SFG D+ +++ +
Sbjct: 10 MPAPLISPSILAADFARLGEQLEAI--SNADWIHVDIMDGHFVPNLSFGPDITATVKRST 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP---HIRRSLRTIHAMGKKTGVAIN 118
D D HLMI S + AG I FH E+ I +G + +I
Sbjct: 68 DKPLDVHLMIESPAKWVETYIKAGATTIIFHVEAVEGEAAAVELAENIRDLGARAAFSIK 127
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P+TP+ D + D +L+M+V PGFGGQ+ + + + K+R + I ++++ +E+DG
Sbjct: 128 PDTPIEPWLDKLHHFDEVLVMSVEPGFGGQKFMPAMLDKVRALRESIDQQNLDTVIEIDG 187
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G+ I +AG D V GS+ F + L L
Sbjct: 188 GIDPDTIALAAEAGCDSFVAGSAVFKSDDPAQAVEELRALA 228
>gi|184200813|ref|YP_001855020.1| ribulose-phosphate 3-epimerase [Kocuria rhizophila DC2201]
gi|183581043|dbj|BAG29514.1| ribulose-5-phosphate 3-epimerase [Kocuria rhizophila DC2201]
Length = 221
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 89/220 (40%), Positives = 128/220 (58%), Gaps = 5/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSIL+ADFSRLGEE+ I + A H DVMD FVPN++ G V+ L++
Sbjct: 1 MTR-CDIHPSILSADFSRLGEELQRI--STADAAHVDVMDNHFVPNLTLGLPVVERLQAV 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI D A+AGC +TFH E++ + R + A G K G+A+ P
Sbjct: 58 SPVPLDLHLMIEDPDRWAPAYAEAGCASVTFHAEAAAAPVKLARELRAAGAKAGLAVRPA 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV D++ E+DM+L+MTV PGFGGQ+ ++ T+PK+R+A + ++L+VDGG+
Sbjct: 118 TPVEPYLDLLPELDMLLVMTVEPGFGGQKFLDVTLPKLRRAAQAVRAHGGTVALQVDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
T I +AGAD V GS+ + + + + L +
Sbjct: 178 TEETIVRAAEAGADTFVAGSAVYGAEDPGAAIEALRGTAR 217
>gi|116333598|ref|YP_795125.1| Pentose-5-phosphate-3-epimerase [Lactobacillus brevis ATCC 367]
gi|116098945|gb|ABJ64094.1| ribulose-5-phosphate 3-epimerase [Lactobacillus brevis ATCC 367]
Length = 217
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L +I + KAGA+ +H D+MDG FVP +S+G ++++R + V
Sbjct: 2 IKVAPSILSADYVNLQPDIEMVDKAGAEVLHIDIMDGNFVPALSYGPGWVKAIRPITKMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + + ++ A AG DII H E++PHI R+L+ I G V INP TPV+
Sbjct: 62 LDVHMMVQNPERYVEDFAKAGADIIGVHVEATPHIHRALQMIQNAGVTPEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+E V+D + +L+MTVNPGFGGQ+ + ST+ KI + A+ + +EVDGGV +
Sbjct: 122 AIEPVLDMVGQVLVMTVNPGFGGQKFLHSTVAKIAELDAIKKAKGYDFDIEVDGGVNDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGA + V GS FN +S + D
Sbjct: 182 VVDCANAGATVAVAGSYVFNADDPVSRINAVKD 214
>gi|160942675|ref|ZP_02089918.1| hypothetical protein FAEPRAM212_00147 [Faecalibacterium prausnitzii
M21/2]
gi|158446030|gb|EDP23033.1| hypothetical protein FAEPRAM212_00147 [Faecalibacterium prausnitzii
M21/2]
gi|295104472|emb|CBL02016.1| ribulose-5-phosphate 3-epimerase [Faecalibacterium prausnitzii
SL3/3]
Length = 216
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+ PSIL+ADF +LG + + AGA+ +H+DVMDG FVPNISFG V++SL D+
Sbjct: 3 IVSPSILSADFGKLGADCRMVLDAGAQMLHYDVMDGHFVPNISFGVPVLKSLHKALPDAF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+D HLMIS + AG + FH E I+ ++ + A+G K G+ I P TP
Sbjct: 63 YDVHLMISHPLQYAEPFIKAGATLYNFHLECEDDIQATIDAVRALGCKVGLTIKPGTPAE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L +D++D++L+M+V PGFGGQ+ + S + K+R KA R +S LEVDGGV +
Sbjct: 123 ALAPWLDQLDLVLVMSVEPGFGGQKFMPSALDKLRWLKAEREARGLSYLLEVDGGVDAAT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
V+AGAD+LV GS+ F + L L
Sbjct: 183 APLCVEAGADVLVAGSAVFGAADPAAAVGALASL 216
>gi|308234457|ref|ZP_07665194.1| ribulose-5-phosphate 3-epimerase [Atopobium vaginae DSM 15829]
gi|328944304|ref|ZP_08241768.1| ribulose-phosphate 3-epimerase [Atopobium vaginae DSM 15829]
gi|327491223|gb|EGF22998.1| ribulose-phosphate 3-epimerase [Atopobium vaginae DSM 15829]
Length = 228
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I I PS+L+A+F +L +E+S+I A A +HFDVMDG FVPN+SFG ++R++++ S
Sbjct: 3 THPICIAPSMLSANFMKLSDELSSI--ATADYLHFDVMDGHFVPNLSFGCPILRAVKASS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLM+ + ++ + DAG D T H E+ H++R + TIH+ K+ VA+NP T
Sbjct: 61 DLPVDVHLMVDNPETTLEWYLDAGADSFTIHMEAQTHLKRLIDTIHSAHKRACVALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
V L+DVI+++DM+L+M+VNPGFGGQ IEST KI + KAL + ++ +EVDGG+
Sbjct: 121 AVMNLDDVIEDVDMVLVMSVNPGFGGQSFIESTCKKIAKVKALCDEHGVNPVIEVDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ N + +AGA +LV GSS FN+ + + L
Sbjct: 181 AHNAYDVARAGATMLVAGSSVFNEHDRSAAIEALRS 216
>gi|94310452|ref|YP_583662.1| ribulose-5-phosphate 3-epimerase [Cupriavidus metallidurans CH34]
gi|93354304|gb|ABF08393.1| D-ribulose-5-phosphate 3-epimerase [Cupriavidus metallidurans CH34]
Length = 232
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 135/218 (61%), Gaps = 8/218 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS---- 61
+I PSIL+ADF+ LG+E+ + AGA IHFDVMD +VPN++ G V ++L+ ++
Sbjct: 5 RIAPSILSADFACLGDEVRGVIAAGADWIHFDVMDNHYVPNLTIGPAVAKALKPHTRRAD 64
Query: 62 --DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D+ A AG +I+FHP++S H+ R+L+ I G K G+A NP
Sbjct: 65 GSSAPLDVHLMVHPVDTLAAEFAQAGAGLISFHPDASVHVDRTLQLIRGAGCKAGLAFNP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
P+ +L+ +D+ID++LIM+VNPGFGGQ I+S + KI A+ LI + R I L+VDGG
Sbjct: 125 AAPLDVLDWTLDKIDLVLIMSVNPGFGGQSFIDSALRKIESARRLIDQSGRDIRLQVDGG 184
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ NI+ AGAD V GS+ F Q + +
Sbjct: 185 IKVDNIRRAADAGADTFVAGSAIFGQSNYKAVIDAMRA 222
>gi|119481909|ref|XP_001260983.1| ribulose-phosphate 3-epimerase [Neosartorya fischeri NRRL 181]
gi|119409137|gb|EAW19086.1| ribulose-phosphate 3-epimerase [Neosartorya fischeri NRRL 181]
Length = 252
Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats.
Identities = 87/246 (35%), Positives = 131/246 (53%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFAVLGNECSTKIAQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI + AGCD+ FH E++
Sbjct: 61 VDRPTQALGKGTFDCHMMIMEPHKWVKEFKSAGCDLYCFHYEAAISSVAATTPEDKETTR 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 PTSPKELIRYIHDEGMQAGIAIKPDTPVDVLWDILENKDEKERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ + +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVKALRERY--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAQDPADV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|260951217|ref|XP_002619905.1| hypothetical protein CLUG_01064 [Clavispora lusitaniae ATCC 42720]
gi|238847477|gb|EEQ36941.1| hypothetical protein CLUG_01064 [Clavispora lusitaniae ATCC 42720]
Length = 231
Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 123/223 (55%), Gaps = 7/223 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-- 61
I PSILA+DF+ LG + +GA +H DVMDG FVPNIS G +I SLR
Sbjct: 3 KAIIAPSILASDFANLGCNCHKMYDSGADWLHIDVMDGHFVPNISLGPPIITSLRKEIPR 62
Query: 62 ---DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ FDCH+M+S + + IA AG D TFH ES+ ++ I G K AI
Sbjct: 63 KAEKTFFDCHMMVSEPEKWVPEIAKAGGDQYTFHYESTKDPLALIKLIKENGMKAACAIK 122
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V +L ++ E+DM L+MTV PGFGGQ+ + +PK+ + + ++++VDGG+
Sbjct: 123 PGTSVDVLYEIGSELDMALVMTVEPGFGGQKFMADMMPKVEKLRTKF--PHLNIQVDGGL 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ + +AGA+++V G+S F + + + ++L
Sbjct: 181 GKETVPAAAEAGANVIVAGTSCFTAPDPVVLIDFMRETVNNSL 223
>gi|46204897|ref|ZP_00049331.2| COG0036: Pentose-5-phosphate-3-epimerase [Magnetospirillum
magnetotacticum MS-1]
Length = 222
Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L +++ I A A H DVMD FVPN++ G V L S D
Sbjct: 5 IAPSILSADFANLERDLNAI--ATADYAHVDVMDNHFVPNLTLGLPVFERLAQVSPVPID 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AG +TFH E++ R R + +G + GVA+ P TPV
Sbjct: 63 AHLMIEDPDRWAPAYAEAGAASVTFHAEAAAAPVRLARELRRLGARAGVALRPATPVEPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D++ E+DMIL+MTV PGFGGQ IE T+PKIR+A+ + + + ++VDGGV+ I+
Sbjct: 123 LDLLTEVDMILVMTVEPGFGGQSFIEGTLPKIRRAREAVSESGLDVWIQVDGGVSRSTIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AGA++ V GS+ + + + L +L +++
Sbjct: 183 RAADAGANVFVAGSAVYGAENVPEEIQALRELAEAS 218
>gi|255076303|ref|XP_002501826.1| ribulose-phosphate 3-epimerase [Micromonas sp. RCC299]
gi|226517090|gb|ACO63084.1| ribulose-phosphate 3-epimerase [Micromonas sp. RCC299]
Length = 222
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 126/222 (56%), Gaps = 4/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ + PS+LA+DF+R+ +E + GA +H D+MDG FVPN++FGA V++ L +
Sbjct: 1 MAPAAIVSPSLLASDFARMADEAKKVIDGGADWLHLDIMDGHFVPNLTFGAPVVKCLAKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ DCHLM+++ ++ + DAG + TFH E A G K GVA+ P
Sbjct: 61 TDAFLDCHLMVTNPGDYVEPLKDAGAHMFTFHIEVDEDAAVLCDRARAAGMKAGVALKPG 120
Query: 121 TPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
TP + + D ++DM+L+MTV PGFGGQ+ +PK++ + + I ++VDGG+
Sbjct: 121 TPAEAVHAICDAGKVDMVLVMTVEPGFGGQKFQPEMMPKVKALRERYPQ--IDIQVDGGL 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I++ AGA+++V GSS F L D +A
Sbjct: 179 GPATIEAAATAGANVIVAGSSVFGSDDVPKAIAVLKDAVTAA 220
>gi|254458171|ref|ZP_05071597.1| ribulose-phosphate 3-epimerase [Campylobacterales bacterium GD 1]
gi|207085007|gb|EDZ62293.1| ribulose-phosphate 3-epimerase [Campylobacterales bacterium GD 1]
Length = 214
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQ+ PS+L+ADF L ++ I AG +H DVMDG FVPN++ G V+ ++ + +
Sbjct: 2 IQVAPSVLSADFGNLQRDVEAICDAGCDLVHVDVMDGHFVPNLTIGPVVVSAIAACATKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A I+FH E H R ++ I ++G K + +NP TP
Sbjct: 62 LDIHLMVENNTFFVDLFAPLKPAYISFHIEEEKHPHRLIQKIRSLGIKPAIVLNPHTPPE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+E ++ ++DMIL+M+VNPGFGGQ I++ IPK + + + + ++VDGGVT +N
Sbjct: 122 SVEYLLQDLDMILLMSVNPGFGGQSFIDTVIPKASKLNEMRNRLNPNCLIQVDGGVTDKN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+SL AG D++V GS FN + K L
Sbjct: 182 IQSLKDAGVDVVVAGSYVFNHASKKEAIKSLQ 213
>gi|291516897|emb|CBK70513.1| ribulose-5-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum F8]
Length = 222
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 7/224 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPAE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + +AGAD+LV GS+ + + A+ ++D++ A A
Sbjct: 179 PKTAHIVAEAGADVLVAGSAVYGAENP---AQAIDDIRTKAEAA 219
>gi|213692248|ref|YP_002322834.1| Ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523709|gb|ACJ52456.1| Ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320458374|dbj|BAJ68995.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 222
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPAE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + ++A
Sbjct: 179 PKTAHIVAEAGADVLVAGSAVYGAEDPAQAIDDIRAKAEAA 219
>gi|89256725|ref|YP_514087.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica LVS]
gi|118497806|ref|YP_898856.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
novicida U112]
gi|156502886|ref|YP_001428951.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010919|ref|ZP_02275850.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FSC200]
gi|194323778|ref|ZP_03057554.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
novicida FTE]
gi|208779869|ref|ZP_03247213.1| ribulose-phosphate 3-epimerase [Francisella novicida FTG]
gi|254368030|ref|ZP_04984050.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica 257]
gi|254369584|ref|ZP_04985595.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FSC022]
gi|254373167|ref|ZP_04988656.1| hypothetical protein FTCG_00749 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374616|ref|ZP_04990097.1| D-ribulose-phosphate 3-epimerase [Francisella novicida GA99-3548]
gi|290953310|ref|ZP_06557931.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica URFT1]
gi|295313462|ref|ZP_06804061.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica URFT1]
gi|89144556|emb|CAJ79871.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica LVS]
gi|118423712|gb|ABK90102.1| D-ribulose-phosphate 3-epimerase [Francisella novicida U112]
gi|134253840|gb|EBA52934.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica 257]
gi|151570894|gb|EDN36548.1| hypothetical protein FTCG_00749 [Francisella novicida GA99-3549]
gi|151572335|gb|EDN37989.1| D-ribulose-phosphate 3-epimerase [Francisella novicida GA99-3548]
gi|156253489|gb|ABU61995.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|157122538|gb|EDO66673.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica FSC022]
gi|194322142|gb|EDX19624.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
novicida FTE]
gi|208744324|gb|EDZ90624.1| ribulose-phosphate 3-epimerase [Francisella novicida FTG]
gi|332678523|gb|AEE87652.1| Ribulose-phosphate 3-epimerase [Francisella cf. novicida Fx1]
Length = 222
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 134/219 (61%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y
Sbjct: 1 MKHIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G + G+A+NP
Sbjct: 61 ITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
T + L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 121 TGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 181 NPYNIAEIAACGVNAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|320586831|gb|EFW99494.1| ribulose-phosphate 3-epimerase [Grosmannia clavigera kw1407]
Length = 251
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 88/253 (34%), Positives = 131/253 (51%), Gaps = 33/253 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S + GA +H D+MDG FVPN++FG V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFANLGHECSKTIEQGADWLHVDIMDGHFVPNLTFGPPVVAKIRSH 60
Query: 61 SDSV----------FDCHLMISSIDSHINIIADAGCDIITFHPE---------------S 95
+ FDCH+MI+ + DAG D+ FH E +
Sbjct: 61 VAAPGTDAPLGRGTFDCHMMIAEPKRWVREFRDAGADLYCFHYEAAFSTAAETPSAQSDA 120
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
S +R IH++G + GVAI P TPV +L ++ D DM+L+MTV PGFGGQ+
Sbjct: 121 STTPAELVRYIHSLGLRAGVAIKPGTPVDVLFPLVDVADAADRPDMLLVMTVEPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ +PK+R + +++EVDGG+ I +AGA+++V GS+ F
Sbjct: 181 FMADQMPKVRTLRDRY--PDLNIEVDGGLGPATIDVAAEAGANVIVAGSAVFGAADPADV 238
Query: 210 AKRLNDLKKSALA 222
+L ++ A
Sbjct: 239 IAKLRAAVEARRA 251
>gi|296454168|ref|YP_003661311.1| ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum JDM301]
gi|296183599|gb|ADH00481.1| Ribulose-phosphate 3-epimerase [Bifidobacterium longum subsp.
longum JDM301]
Length = 222
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 126/224 (56%), Gaps = 7/224 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICEVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV L D++DE DM+L+MTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPLFDILDEFDMVLVMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + +AGAD+LV GS+ + + A+ ++D++ A A
Sbjct: 179 PKTAHIVAEAGADVLVAGSAVYGAENP---AQAIDDIRTKAEAA 219
>gi|166032711|ref|ZP_02235540.1| hypothetical protein DORFOR_02426 [Dorea formicigenerans ATCC
27755]
gi|166027068|gb|EDR45825.1| hypothetical protein DORFOR_02426 [Dorea formicigenerans ATCC
27755]
Length = 220
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 138/214 (64%), Gaps = 2/214 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF LGE++ GAK +HFDVMDG FVP+ISFG V++S+ + +D V
Sbjct: 4 ILAPSILSADFKVLGEQMKLTEDNGAKYLHFDVMDGMFVPSISFGMPVLKSIHNATDQVM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ ++ +AG DI+T H E+ + ++ I G K G++I PETPV+
Sbjct: 64 DAHLMVQEPIRYVEAFKEAGADIVTIHLEACEDVNATIAKIRECGMKVGLSICPETPVSK 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E+++ +IDM+LIM+V+PGFGGQ+ I ++ KIR+A+ +I + + ++VDGG+ N+
Sbjct: 124 VENLLKDIDMLLIMSVHPGFGGQKFIPESLDKIREARKMITDQGLSVDIQVDGGIYQTNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K ++ AGA+++V GS+ F + + LK
Sbjct: 184 KEVLDAGANIIVAGSAVFKGDPAENTKAMMEILK 217
>gi|115315133|ref|YP_763856.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica OSU18]
gi|115130032|gb|ABI83219.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
holarctica OSU18]
Length = 222
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 134/219 (61%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y
Sbjct: 1 MKHIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G + G+A+NP
Sbjct: 61 ITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
T + L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 121 TDIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 181 NPYNIAEIAACGVNAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|307205237|gb|EFN83617.1| Ribulose-phosphate 3-epimerase [Harpegnathos saltator]
Length = 223
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 84/217 (38%), Positives = 124/217 (57%), Gaps = 4/217 (1%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR- 58
M + +I PSIL AD ++L EE + GA +H DVMDG FVPN++FG +++ LR
Sbjct: 1 MAKLNAKIGPSILNADLAQLYEESQKLLDNGADYLHLDVMDGHFVPNLTFGHPIVKCLRN 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D+ F+ H+M+S + I +ADAG + TFH E + R I G K GVA+
Sbjct: 61 KIKDAFFETHMMVSDPEKWIVPMADAGVNQYTFHVEPVKDVFLVCRKIKEAGMKVGVALK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TPV ++ D ++ DMIL+MTV PGFGGQ+ IES + K+ + + +EVDGGV
Sbjct: 121 PGTPVDVVCDYVNLADMILVMTVEPGFGGQKFIESMLQKVSWLRK--NYPLLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+S +AGA+++V G++ + L +
Sbjct: 179 GLTTIESCAKAGANMIVSGTAIIGSTDQAKVITTLKN 215
>gi|189485685|ref|YP_001956626.1| ribulose-phosphate 3-epimerase [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287644|dbj|BAG14165.1| ribulose-phosphate 3-epimerase [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 216
Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I+PSIL+ADF+ L ++ I K+GA+ +H DVMDG FVPNI+ G V++SLR +
Sbjct: 1 MKKIIIIPSILSADFAALKHDLKMIEKSGAEWVHIDVMDGHFVPNITVGPVVVKSLRKET 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ FD HLMI++ + + +AG D+ITFH E S ++ + I + G K G++I P+T
Sbjct: 61 ELFFDIHLMITNPEKYWRKFKEAGADLITFHSEISAEKKKLVEDIRSSGIKAGISIKPKT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
V+ +E ++ ++++LIMTV PGFGGQ +++ + KI+ + +I + + +EVDGG+
Sbjct: 121 SVSEIEALLPYLNLVLIMTVEPGFGGQSFMDNMVAKIKVLRKVIDENNYDCLIEVDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
SR + AGAD LV GS F + + K
Sbjct: 181 SRTASICIDAGADALVSGSYIFAAENPLEAVK 212
>gi|212544274|ref|XP_002152291.1| ribulose-phosphate 3-epimerase [Penicillium marneffei ATCC 18224]
gi|210065260|gb|EEA19354.1| ribulose-phosphate 3-epimerase [Penicillium marneffei ATCC 18224]
Length = 251
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 87/246 (35%), Positives = 134/246 (54%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF++LG E + + GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFAQLGPECATTMERGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ ++ AGCD+ FH E++
Sbjct: 61 VAKPATPGERGTFDCHMMIAEPQKWVSEFKSAGCDLYCFHYEAAISSTAAKDPADYTTTT 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G K G+AI P+T V +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 KTSPKELIRYIHESGMKAGIAIKPDTKVDVLWDILENETEIERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ + ++++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 FMASELPKVTALRQRY--PNLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAKDPAEV 238
Query: 210 AKRLND 215
++L D
Sbjct: 239 IQKLRD 244
>gi|256847368|ref|ZP_05552814.1| ribulose-phosphate 3-epimerase [Lactobacillus coleohominis
101-4-CHN]
gi|256716032|gb|EEU31007.1| ribulose-phosphate 3-epimerase [Lactobacillus coleohominis
101-4-CHN]
Length = 217
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 129/217 (59%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + + GA+ +H D+MDG FVP+ISFG ++++R + V
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVDQGGAEYLHIDIMDGSFVPSISFGPGFVKAIRPITKMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + I DAG DII E++ HI R+L+ I G K V INP TPV
Sbjct: 62 LDVHLMVQNPEHIIPAFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+++ V+ +D +L+MTVNPGFGGQ+ + T+ KI + L +E+DGGV +
Sbjct: 122 MIKPVLHMVDQVLVMTVNPGFGGQKFLPETVEKIAELNQLKKDHGYDFDIEIDGGVNDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGA + V GS + ++ R+N +K +
Sbjct: 182 VVDCYKAGATVAVAGSYVYGADDPVA---RINAIKNA 215
>gi|317508960|ref|ZP_07966593.1| ribulose-phosphate 3-epimerase [Segniliparus rugosus ATCC BAA-974]
gi|316252725|gb|EFV12162.1| ribulose-phosphate 3-epimerase [Segniliparus rugosus ATCC BAA-974]
Length = 222
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 122/218 (55%), Gaps = 7/218 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+ L +++ + GA +H DVMD FVPN++ GA V+ S++ +D
Sbjct: 8 MIAPSILSADFANLARDVAAVR--GADWLHVDVMDNHFVPNLTLGAPVVASIKKATDIPL 65
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI A+ G +TFH E+S R I A G G+AI P TP+
Sbjct: 66 DCHLMIEDPARWAPEYAEIGAKNVTFHAEASDDPLAVARDIRAAGAGAGLAIKPGTPLEP 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA--LIGKRSISLEVDGGVTSRNI 183
+V+ D +L+M+V PGFGGQ+ I + K+R +A G+ ++ +E+DGG+ I
Sbjct: 126 YLEVLRGFDTVLVMSVEPGFGGQKFIPEVLDKVRTLRAVKDRGELTVLIEIDGGINMDTI 185
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
++ +AG D V GS+ + A+ + L+++AL
Sbjct: 186 EAAAEAGVDCFVAGSAVYGAADP---AQAVEALRQAAL 220
>gi|50309245|ref|XP_454629.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643764|emb|CAG99716.1| KLLA0E15071p [Kluyveromyces lactis]
Length = 237
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 80/232 (34%), Positives = 127/232 (54%), Gaps = 14/232 (6%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I I PSILA+DF++LG E N+ +GA +H D+MDG FVPN+S G V+ SLR
Sbjct: 1 MVRAI-IAPSILASDFTKLGCECHNVINSGADWLHIDIMDGHFVPNMSLGQPVVESLRKV 59
Query: 61 -----------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
+ FDCH+M+S + + A GCD TFH E++ ++ I
Sbjct: 60 IGKYNDPDTKLPRAFFDCHMMVSEPERWVEDFARIGCDQFTFHYEATKDPVALVKLIKKH 119
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
G K ++ P TPV +L ++ +DM L+MTV PGFGGQ+ + + K++ + +
Sbjct: 120 GMKAACSVKPGTPVDVLYELAPSLDMALVMTVEPGFGGQKFMADMMSKVKDLRTRF--PN 177
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
++++VDGG+ +N++ +AGA+++V G+S F + AL
Sbjct: 178 LNIQVDGGLGKQNVELAAEAGANVIVAGTSVFRAHDPADVIGFMKTKVNDAL 229
>gi|295396523|ref|ZP_06806683.1| ribulose-phosphate 3-epimerase [Brevibacterium mcbrellneri ATCC
49030]
gi|294970641|gb|EFG46556.1| ribulose-phosphate 3-epimerase [Brevibacterium mcbrellneri ATCC
49030]
Length = 217
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 83/220 (37%), Positives = 137/220 (62%), Gaps = 7/220 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL+ADF+ L E+ I + A H DVMD FVPN++FG V+ +++ S
Sbjct: 1 MKIHPSILSADFANLETELQRI--SNADMAHVDVMDNHFVPNLTFGPPVVERIKAVSPVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D + + A+ GC+ +TFH E++ R R + +G + VAI P TPV
Sbjct: 59 IDAHLMIADADRNAPVYAEMGCESVTFHLEAAAAPVRLARELRRLGAQASVAIKPGTPVE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L D++ E D +LIMTV PGFGGQ+ ++ +PK+++ +A I +++ ++++VDGG+++
Sbjct: 119 PLIDLLGEFDQVLIMTVEPGFGGQKFLDVCLPKVKRLRAAISEQNMKVNIQVDGGISAST 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ V+AGA++ V GS+ + A +++L+ ALA
Sbjct: 179 LDRAVEAGANVFVAGSAVYGSDNP---AATIDELRAQALA 215
>gi|111224597|ref|YP_715391.1| D-ribulose-5-phosphate 3-epimerase [Frankia alni ACN14a]
gi|111152129|emb|CAJ63856.1| D-ribulose-5-phosphate 3-epimerase (Pentose-5-phosphate
3-epimerase) [Frankia alni ACN14a]
Length = 245
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 3/214 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PS+LAADF RL + + A +H DVMD FVPN++F D + +LRS + +
Sbjct: 3 TAQIYPSMLAADFGRLADAALAVE-GRADWLHVDVMDYHFVPNLAFSPDAVTALRSTTQT 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E+ +RR+ I A G +TG+A+ P TPV
Sbjct: 62 PLDCHLMIEDPDRWAADYAERGAANVTIHAEAVSDLRRTTAAIRAAGARTGLAVKPNTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D++L+MT+ PGFGGQ+ + +PKI A+ LI R + L++DGGV
Sbjct: 122 ERYLDDLHRFDLLLLMTIEPGFGGQKFMTEVLPKIEAARRLIDDRGLDLWLQIDGGVNEN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ AG D+ V G++ F ++L
Sbjct: 182 TVEQAAAAGVDVFVAGTAVFGADDPGEAVEKLRA 215
>gi|21674488|ref|NP_662553.1| ribulose-phosphate 3-epimerase [Chlorobium tepidum TLS]
gi|21647678|gb|AAM72895.1| ribulose-phosphate 3-epimerase [Chlorobium tepidum TLS]
Length = 220
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ + PSIL+ADF+ L + KAGA +H DVMDG FVPNI+FG+ ++++++ +
Sbjct: 4 KTTLLAPSILSADFTNLKASVELAEKAGADWMHCDVMDGIFVPNITFGSFIVQAIKQCTS 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLMI D +I A AG D IT H E+ PH+ R+++ I ++G K GV+INP TP
Sbjct: 64 IVIDTHLMIVDPDKYIEDFAKAGSDQITVHLEACPHLHRTIQLIKSLGVKAGVSINPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V++LE V+ ++D++L+M+VNPGFGGQ+ I I KI Q A+ + + + VDGGVT
Sbjct: 124 VSLLEPVLADLDLVLLMSVNPGFGGQKFIPGAIKKIMQLDAMRMEMNPEMVIAVDGGVTE 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
N +V AGAD L+ G++FF ++ AK+L L
Sbjct: 184 ENAAMIVDAGADALIAGTAFFRAPDPVAAAKKLKGL 219
>gi|91790299|ref|YP_551251.1| ribulose-5-phosphate 3-epimerase [Polaromonas sp. JS666]
gi|91699524|gb|ABE46353.1| ribulose-5-phosphate 3-epimerase [Polaromonas sp. JS666]
Length = 231
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 99/225 (44%), Positives = 144/225 (64%), Gaps = 11/225 (4%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P+ +I PSIL+ADF+RLG E+ + AGA IHFDVMD +VPN++FG + ++L+ ++
Sbjct: 7 PTYRIAPSILSADFARLGAELETVIAAGADWIHFDVMDNHYVPNLTFGPMICQALKPHAK 66
Query: 63 S------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
D HLM+ +D+ ADAG D+I+FHPE+S H+ RS++ I A G K G+
Sbjct: 67 KADGSAVPIDVHLMVQPVDALAAAFADAGADLISFHPEASGHVHRSVQAIKARGCKAGLV 126
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEV 174
NP + + +L+ VID+ID+ILIM+VNPGFGGQ I+S + KI QA+ I R I LEV
Sbjct: 127 FNPASSMDVLDWVIDDIDLILIMSVNPGFGGQSFIDSALRKIEQARKRIDASGRDIRLEV 186
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
DGG+ + NI + AGAD V GS+ F + Y ++ ++ +
Sbjct: 187 DGGIKTDNIARVAAAGADTFVAGSAIFGKPD---YKAVIDAMRTA 228
>gi|324999325|ref|ZP_08120437.1| ribulose-phosphate 3-epimerase [Pseudonocardia sp. P1]
Length = 235
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 121/225 (53%), Gaps = 12/225 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKA--------GAKQIHFDVMDGCFVPNISFGAD 52
M P I PSIL+ADF+RL +E + + + GA +H DVMD FVPN++ G
Sbjct: 1 MHP--MIAPSILSADFARLADEAAAVGPSADGTAGDPGADWLHVDVMDAHFVPNLTLGLP 58
Query: 53 VIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
V++SLR+ +D DCHLMI D A+AG +T H E++ R + A G
Sbjct: 59 VVQSLRAATDIPLDCHLMIEDPDRWAPGYAEAGAKNVTVHVEAARDPVMLARDLRAAGAL 118
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
G++I P TP+ +V+ D +L+M+V PGFGGQ + + K+R A+ L+ + L
Sbjct: 119 AGLSIKPGTPLDPYVEVLKHYDTLLVMSVEPGFGGQSFMSEVLEKVRAARRLVDTGHLKL 178
Query: 173 --EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
E+DGG+ + I+ +AG D V GS+ +N + L D
Sbjct: 179 IVEIDGGINAETIEQAAEAGVDCFVAGSAVYNAEDPGRAVAALRD 223
>gi|182415416|ref|YP_001820482.1| ribulose-phosphate 3-epimerase [Opitutus terrae PB90-1]
gi|177842630|gb|ACB76882.1| Ribulose-phosphate 3-epimerase [Opitutus terrae PB90-1]
Length = 218
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I + PS+LA D ++L + + G +H D+MDG FVPN+SFG + +LR +
Sbjct: 1 MHPPI-LAPSLLAGDHAQLATSARIVEELGLPWLHLDIMDGHFVPNLSFGPATLTALRRH 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ FD HLM+S +I A AG + I+ H E + +L IHA+G + G+ +NP
Sbjct: 60 GIKAYFDTHLMLSQPARYIEPFAKAGANQISIHIEPTYDHADTLDRIHALGCQAGIVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
+TP + +E ++ +D++L+MTV PGFGGQ + +PKIRQ +R + LEVDGG
Sbjct: 120 DTPASAVEPLLARVDLVLVMTVQPGFGGQSFRAAMLPKIRQLDQWRSERALTFRLEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + AGAD V G+SFF + ++A L
Sbjct: 180 IDLETARQCRAAGADTFVAGTSFFGAPDKPAFAAAFAQL 218
>gi|291297243|ref|YP_003508641.1| ribulose-phosphate 3-epimerase [Meiothermus ruber DSM 1279]
gi|290472202|gb|ADD29621.1| ribulose-phosphate 3-epimerase [Meiothermus ruber DSM 1279]
Length = 224
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 138/214 (64%), Gaps = 2/214 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P + + PSIL ADF+RLGE+I AG IH DVMDG FVPN++FG V+ ++R +
Sbjct: 1 MPKLLVAPSILTADFARLGEQIREAEAAGVDWIHLDVMDGRFVPNLTFGPLVVEAIRKVT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + +I A AG D IT H E++PH R+++ I +GKK G+AINP T
Sbjct: 61 ALPLDVHLMIVEPERYIADFARAGADWITVHHEATPHAHRAVQQIKELGKKAGLAINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
P+ L ++ E+D+ L+M+VNPGFGGQ+ I ++ +IR+ AL G+ + ++VDGG+
Sbjct: 121 PLEALLPLLPELDLALLMSVNPGFGGQKYIPASTERIRRLAALRGQMNPACLIQVDGGIK 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
N+ + +AGAD++VVGS+ FN + K+L
Sbjct: 181 PVNVAEVYRAGADVVVVGSALFNNRPVAENMKKL 214
>gi|261885285|ref|ZP_06009324.1| ribulose-phosphate 3-epimerase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 231
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 126/215 (58%), Gaps = 2/215 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L +E+ I +AGA +H DVMDG FVPN++ G V+ ++ S
Sbjct: 1 MYVAPSILSADFGKLDDEVKAICEAGADLVHIDVMDGHFVPNLTVGPLVVNAVAKSSSKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ +++ ++FH E H R + I G + +NP TPV+
Sbjct: 61 LDIHLMVENVPFFVDLFLPLKPKFLSFHIEEETHPLRLIEYIRKFGVSPAIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE +++E+DM+L+M+VNPGFGGQ+ I S + KI++ + LI K +EVDGGV N
Sbjct: 121 SLEYIMNEVDMVLLMSVNPGFGGQKFIPSVLKKIKELRDLIEKNGAKCMIEVDGGVHGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L +AG D++V G+ F+ K L +K
Sbjct: 181 VSELDEAGVDIVVAGNYEFSSNDYEQAIKALKLIK 215
>gi|119194077|ref|XP_001247642.1| hypothetical protein CIMG_01413 [Coccidioides immitis RS]
Length = 252
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/246 (36%), Positives = 131/246 (53%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E SN+ KA + IH D+MDG FVPNI+FGA V+ ++R++
Sbjct: 1 MAPPAIIAPSILSADFANLGAECSNLMKADSDWIHVDIMDGHFVPNITFGAPVVSNIRAH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VQKPASIGGKGTFDCHMMIAEPQKWVKEFKQAGCDLYCFHWEAAMTSTAAKDPTDKETTA 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+A+ P T V +L D++ + DM+LIMTVNPGFGGQ+
Sbjct: 121 RTSPKELIRYIHETGMQAGIALKPATSVDVLWDILENPVEIERPDMVLIMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 FMASELPKVAALRK--KYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAKDPAEV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|67901202|ref|XP_680857.1| hypothetical protein AN7588.2 [Aspergillus nidulans FGSC A4]
gi|40742978|gb|EAA62168.1| hypothetical protein AN7588.2 [Aspergillus nidulans FGSC A4]
gi|259483910|tpe|CBF79684.1| TPA: ribulose-phosphate 3-epimerase (AFU_orthologue; AFUA_2G15190)
[Aspergillus nidulans FGSC A4]
Length = 252
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/246 (36%), Positives = 134/246 (54%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S GA +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFATLGSECSTKISEGADWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + DAGCD+ FH E++
Sbjct: 61 VHRPSQPQGKGTFDCHMMIAEPQKWVKDFKDAGCDLYCFHYEAAVSSVAAKEPADKETTR 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 KTSPKELIRFIHEEGMQAGIAIKPDTPVDVLWDILAADDEKERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ + +++EVDGG+ I +AGA+++V GS+ F +
Sbjct: 181 FMASELPKVKALRE--KYPDLNIEVDGGLGLGTIDQAAEAGANVIVAGSAVFGAENPGDV 238
Query: 210 AKRLND 215
++L D
Sbjct: 239 IQKLRD 244
>gi|329118961|ref|ZP_08247656.1| ribulose-phosphate 3-epimerase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464989|gb|EGF11279.1| ribulose-phosphate 3-epimerase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 226
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 105/225 (46%), Positives = 145/225 (64%), Gaps = 7/225 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I PSIL+ADF+RLGEE++ + +AGA IHFDVMD +VPN++FG V +++ Y+
Sbjct: 1 MQKFRIAPSILSADFARLGEEVTRVVEAGADLIHFDVMDNHYVPNLTFGPMVCTAIKPYA 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ +DS I ADAG DIITFHPE+S H RSL I G + G+ +NP T
Sbjct: 61 AVPVDVHLMVEPVDSLIAAFADAGADIITFHPEASRHADRSLALIRERGCQAGLVLNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
V++LE+V+D +DM+L+M+VNPGFGGQ I T K+RQ +AL+ R I+LEVD
Sbjct: 121 SVSVLENVLDRLDMVLLMSVNPGFGGQSFIPHTFAKLRQTRALLDAYEAQSGRRIALEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
GG+ + NI AGAD V GS+ F Q + ++ +L K+
Sbjct: 181 GGIKTANIAQAAAAGADTFVAGSAIFGQPDYRAVISQMRAELAKA 225
>gi|66816491|ref|XP_642255.1| ribulose phosphate 3-epimerase [Dictyostelium discoideum AX4]
gi|60470330|gb|EAL68310.1| ribulose phosphate 3-epimerase [Dictyostelium discoideum AX4]
Length = 225
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 130/219 (59%), Gaps = 6/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PS+L++DF+ L + + + + GA +H DVMD FVPN++ GA +++SLR +
Sbjct: 1 MSLKPIICPSLLSSDFAFLARDSNYMLECGADWLHIDVMDNHFVPNLTLGAPIVKSLRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAI 117
+ FDCHLM+++ ++ I +AG + ITFH E++ ++ + I G K + +
Sbjct: 61 TKGYFDCHLMVTNPETMIEDFKNAGANSITFHIEATEPRGITQKVITQIKEAGMKVALCV 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P+TP+ + +D++D +LIMTV PGFGGQ ++ +PK++ ++ +++++VDGG
Sbjct: 121 KPKTPIEEVFPYVDQLDFVLIMTVEPGFGGQSFMKDMMPKVKTLRS--KYPNLNIQVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLND 215
+ I +AGA+++V GS+ F + K D
Sbjct: 179 LDPSTIDMAAEAGANVIVAGSALFKPNQDPKETIKLFKD 217
>gi|221133682|ref|ZP_03559987.1| Ribulose-phosphate 3-epimerase [Glaciecola sp. HTCC2999]
Length = 222
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 103/221 (46%), Positives = 149/221 (67%), Gaps = 6/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S I PSIL+ADF+RLGEE+ + AGA +HFDVMD +VPN+SFGA + ++LR Y
Sbjct: 1 MSSFLIAPSILSADFARLGEEVETVLAAGADVVHFDVMDNHYVPNLSFGAPICKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM++ +DS I AG +I+FHPE+S H+ RSL+ I G + G+ +NP
Sbjct: 61 ITAPIDVHLMVTPVDSMIEQFVTAGASMISFHPEASDHVDRSLQLIIEGGCQAGLVLNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TP+++LE I ++D IL+M+VNPGFGGQ+ IE T+ KI + KAL+ R I +EVDGG+
Sbjct: 121 TPLSVLEHTIHKLDYILLMSVNPGFGGQKFIEHTLTKIAKVKALVDASGRDIRIEVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI ++ AGAD+ V GS+ FNQ YA+ ++ ++++
Sbjct: 181 NCDNIAAIAAAGADMFVAGSAIFNQPN---YAEVISTIRRN 218
>gi|291549485|emb|CBL25747.1| ribulose-phosphate 3-epimerase [Ruminococcus torques L2-14]
Length = 220
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 84/213 (39%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF LGE++ +AGA+ IHFDVMDG FVP+ISFG V+ S++ +
Sbjct: 4 ILAPSILSADFKILGEQLKLTEEAGAEYIHFDVMDGMFVPSISFGMPVLASIKGATTQTL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ ++ AG DI+T H E+ ++ ++ IHA G K G++I P+TPV +
Sbjct: 64 DVHLMVTEPIRYVEEFVKAGADIVTVHYEACEDLQATIDKIHAAGAKVGISIKPKTPVDV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L +D+ +M LIM+V PGFGGQ I ++ +I + + L+ ++ + +EVDGG+ +N+
Sbjct: 124 LLPYLDQAEMFLIMSVEPGFGGQAFIPESLERISELRNLLNEKGLTTDIEVDGGIYHKNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ AGA+++V GS F + + AK + L
Sbjct: 184 AEVLAAGANVMVSGSGVFKGDIKDNTAKFMEIL 216
>gi|257457859|ref|ZP_05623018.1| ribulose-phosphate 3-epimerase [Treponema vincentii ATCC 35580]
gi|257444572|gb|EEV19656.1| ribulose-phosphate 3-epimerase [Treponema vincentii ATCC 35580]
Length = 209
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 2/206 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S + PS+L+ADFSRL EE+ I G + +H DVMDG FVPN++FGA V+RSLRS
Sbjct: 1 MDASFILAPSLLSADFSRLAEELQFIEVNGGQWVHLDVMDGAFVPNLTFGAPVVRSLRSK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLM++ + A AG D TFH E+ H R + I A G K GV+I P
Sbjct: 61 STLPFDVHLMVAHPQDFVKDFAAAGADYFTFHIEAVVHAHRLITEIRAAGMKPGVSIVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV +L++V+ +D++L+MTVNPGFGGQ +I + K+++ K + VDGGV
Sbjct: 121 TPVHLLDEVLPFVDLVLVMTVNPGFGGQTMIIPCLEKVKKLCEYREKYGYRYLISVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQK 204
+ + ++ +GAD++V GSSFF+
Sbjct: 181 NAETLPAVCSSGADVVVSGSSFFSGD 206
>gi|331701493|ref|YP_004398452.1| ribulose-phosphate 3-epimerase [Lactobacillus buchneri NRRL
B-30929]
gi|329128836|gb|AEB73389.1| ribulose-phosphate 3-epimerase [Lactobacillus buchneri NRRL
B-30929]
Length = 217
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + + GA+ +H D+MDG FVP +S+G ++++R + +
Sbjct: 2 IKVAPSILSADYVNLQKDIEKVDQGGAEVLHIDIMDGQFVPALSYGPGWVKAIRPITKMI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + I+ ADAG DII H E++PHI R+L+ I G K V INP TPV+
Sbjct: 62 LDVHMMVEQPERFIDQFADAGADIIGVHVEATPHIHRALQMIKNKGVKAEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
++ V+ +D +L+MTVNPGFGGQ+ + T+ KI + L + +E+DGGV
Sbjct: 122 AIKPVLYMVDQVLVMTVNPGFGGQKFLPETVKKIAELDELKKSEGLNFDIEIDGGVNDHT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ QAGA + V GS F+ +S K + D
Sbjct: 182 VVGAYQAGATVAVAGSYVFDADDPVSRIKAIKD 214
>gi|254166703|ref|ZP_04873557.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
gi|289596158|ref|YP_003482854.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
gi|197624313|gb|EDY36874.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
gi|289533945|gb|ADD08292.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
Length = 215
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 136/215 (63%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFSRL +EI K GA +H D+MDG FVPNI+FG VI+S+R +
Sbjct: 2 VKVSPSILSADFSRLCDEIKFCEKGGADMLHLDIMDGHFVPNITFGPVVIKSIRKCTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D + +AG DIIT H E I+ LR IH G + G+AINPETP
Sbjct: 62 FDAHLMIERPDKFVKDFVNAGSDIITVHREIKISIKNVLRKIHNYGAEAGIAINPETPFE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+++ +++++ +LIM+V+PGF GQ IE T+ KI++A+ I + + + VDGGV N
Sbjct: 122 KVKEHLEDVEYLLIMSVHPGFAGQSFIEDTLEKIKEARKYIDEEGLEVQIAVDGGVKHHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +V AGAD+LV S+ FN S K++ +K
Sbjct: 182 AKRIVDAGADILVAASAIFNG-NVESNIKKMKAIK 215
>gi|331004334|ref|ZP_08327809.1| ribulose-phosphate 3-epimerase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411400|gb|EGG90815.1| ribulose-phosphate 3-epimerase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 219
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 136/217 (62%), Gaps = 5/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+LAA+F L ++ + + + +H DVMDG FVP+ISFG VI SLR
Sbjct: 1 MKKN--IAPSLLAANFFDLSSQMKLLKEGNIEILHLDVMDGMFVPSISFGMPVISSLRKS 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D FD H+M+ + + +I +G + IT H E+ HI R++ I + G ++G++INP
Sbjct: 59 VDFFFDVHMMVENPERYIEDFYKSGANGITIHFEACKHIDRTISQIKSFGLRSGISINPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TPV+ L+++I E+DM+LIM+VNPGFGGQ+ I +I KI++ + +R+ ++VDGGV
Sbjct: 119 TPVSFLQNIISEVDMVLIMSVNPGFGGQKFIPYSIDKIKELSKMRAERNQKFLIQVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NIKSL AG D V GSS F ++ K LND
Sbjct: 179 DVNNIKSLSDAGVDEFVAGSSVFKG-DILNNIKALND 214
>gi|317483266|ref|ZP_07942261.1| ribulose-phosphate 3-epimerase [Bifidobacterium sp. 12_1_47BFAA]
gi|316915335|gb|EFV36762.1| ribulose-phosphate 3-epimerase [Bifidobacterium sp. 12_1_47BFAA]
Length = 222
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I A A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--ANADLVHVDVMDHHFVPNLTLGEPIVGRICQVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKACFAVRPVE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + +AGAD+LV GS+ + + + ++A
Sbjct: 179 PKTAHIVAEAGADVLVAGSAVYGAENPAQAIDDIRAKAEAA 219
>gi|313681498|ref|YP_004059236.1| ribulose-5-phosphate 3-epimerase [Sulfuricurvum kujiense DSM 16994]
gi|313154358|gb|ADR33036.1| ribulose-5-phosphate 3-epimerase [Sulfuricurvum kujiense DSM 16994]
Length = 213
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+ADF L ++ I AG +H DVMDG FVPN++ G V+ ++ +
Sbjct: 1 MLVAPSVLSADFGNLARDVRAICDAGCDLVHVDVMDGHFVPNLTIGPVVVSAIAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A + I+FH E + R ++ I ++G K + +NP TP
Sbjct: 61 LDIHLMVQNNTFFVDLFAPLKPEYISFHIEEEKNPHRLIQHIRSLGIKPAIVLNPHTPAE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+E ++ ++DM+L+M+VNPGFGGQ+ I + + KI++ KAL + +E+DGGV S N
Sbjct: 121 AIEYLLGDLDMVLVMSVNPGFGGQKFIPTVVEKIKRLKALRDRINPECMIEIDGGVGSSN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I L +AG D+ V GS F Y ++ L+
Sbjct: 181 IAVLKEAGVDICVAGSYVFGADD---YKTAIDSLR 212
>gi|330923081|ref|XP_003300090.1| hypothetical protein PTT_11244 [Pyrenophora teres f. teres 0-1]
gi|311325943|gb|EFQ91823.1| hypothetical protein PTT_11244 [Pyrenophora teres f. teres 0-1]
Length = 252
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 86/245 (35%), Positives = 130/245 (53%), Gaps = 32/245 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG+ S+ GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFGALGKACSDTISQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VDRPTVAHGKGTFDCHMMIAEPKRWVRDFKKAGCDLYCFHYEAAVSSTAADSPSGKSDKQ 120
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQL 150
+ +R IH G + G+AI P TPV +L ++++ DM+L+MTV PGFGGQ
Sbjct: 121 TSPQDLIRFIHTEGMQAGIAIKPSTPVDVLWEILENPNKEEVPDMVLVMTVEPGFGGQSF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ S +PK+ + + + +EVDGG++ + I AGA+++V GS+ F
Sbjct: 181 MASELPKVTALRKKYPE--LHIEVDGGLSEKTIDQAADAGANVIVAGSAVFGASDPGDVI 238
Query: 211 KRLND 215
K+L +
Sbjct: 239 KKLRE 243
>gi|303311561|ref|XP_003065792.1| ribulose-phosphate 3-epimerase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105454|gb|EER23647.1| ribulose-phosphate 3-epimerase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039672|gb|EFW21606.1| ribulose-phosphate 3-epimerase [Coccidioides posadasii str.
Silveira]
Length = 252
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/246 (36%), Positives = 130/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E SN+ KA + IH D+MDG FVPNI+FGA V+ +R++
Sbjct: 1 MAPPAIIAPSILSADFANLGAECSNLMKADSDWIHVDIMDGHFVPNITFGAPVVSKIRAH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VQKPASIGGKGTFDCHMMIAEPQKWVKEFKQAGCDLYCFHWEAAMTSTAAKDPADKETTA 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+A+ P T V +L D++ + DM+LIMTVNPGFGGQ+
Sbjct: 121 RTSPKELIRYIHETGMQAGIALKPATSVDVLWDILENPVEIERPDMVLIMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 FMASELPKVEALRK--KYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAKDPAEV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|239608416|gb|EEQ85403.1| ribulose-phosphate 3-epimerase [Ajellomyces dermatitidis ER-3]
gi|327349618|gb|EGE78475.1| ribulose-phosphate 3-epimerase [Ajellomyces dermatitidis ATCC
18188]
Length = 254
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/246 (36%), Positives = 131/246 (53%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF+ LG S++ G IH D+MDG FVPNI+FG V+ +R +
Sbjct: 1 MTPPAIIAPSILSADFAALGSACSDVMDWGGDWIHVDIMDGHFVPNITFGPPVVTKIRKH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + AGC++ FH E++
Sbjct: 61 VAEPNKHCEKGTFDCHMMIAEPQKWVKEFKKAGCNLYCFHYEAAVASTAAKDPMDNSTTR 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQ 149
+R IH G + G+AI PET V +L D++D+ DM+LIMTV PGFGGQ+
Sbjct: 121 RTSPTELIRYIHDCGMRAGIAIKPETDVDVLWDILDQKDELDTPDMVLIMTVRPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ES + K+R +A K I+++VDGG+ +K AGA+++V GS+ F+ +
Sbjct: 181 FMESQLEKVRALRARYPK--INIQVDGGLGEDTVKLAADAGANVIVAGSAVFHAQNPGHV 238
Query: 210 AKRLND 215
K L +
Sbjct: 239 IKLLRN 244
>gi|242812021|ref|XP_002485872.1| ribulose-phosphate 3-epimerase [Talaromyces stipitatus ATCC 10500]
gi|218714211|gb|EED13634.1| ribulose-phosphate 3-epimerase [Talaromyces stipitatus ATCC 10500]
Length = 252
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 87/247 (35%), Positives = 132/247 (53%), Gaps = 34/247 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF++LG E + + GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFAQLGSECATTIERGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ ++ AGCD+ FH E++
Sbjct: 61 VAKPATPGGKGTFDCHMMIAEPQKWVSEFKSAGCDLYCFHYEAAISSTAAKDPANSSKTT 120
Query: 97 --PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQ 148
R +R IH G K G+AI P+T V +L D++ + DM+L+MTV+PGFGGQ
Sbjct: 121 AQTSPRELIRYIHESGMKAGIAIKPDTKVDVLWDILENEEEIERPDMVLVMTVHPGFGGQ 180
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ + S +PK+ + +++EVDGG+ I AGA+++V GS+ F K
Sbjct: 181 KFMASELPKVTALRQRY--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAKDPAE 238
Query: 209 YAKRLND 215
+L +
Sbjct: 239 VIAKLRE 245
>gi|226497150|ref|NP_001149850.1| ribulose-phosphate 3-epimerase [Zea mays]
gi|195635057|gb|ACG36997.1| ribulose-phosphate 3-epimerase [Zea mays]
gi|223974449|gb|ACN31412.1| unknown [Zea mays]
Length = 225
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 6/216 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PS+L++DF+ L E + + GA +H D+MDG FVPN++ GA VI+SLR ++ +
Sbjct: 3 AAKIAPSMLSSDFANLASEAERMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKA 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM++ ++ AG TFH E + + + +++I + G + GV++ P TP
Sbjct: 63 YLDCHLMVTKPSDYVEPFGKAGASGFTFHIEVARDNWQDLIQSIKSKGMRPGVSLRPGTP 122
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V + +++ ++++L+MTV PGFGGQ+ + + K+R + S+ +EVDGG+
Sbjct: 123 VEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMDKVRTLRK--KYPSLDIEVDGGLG 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I AGA+ +V GSS F + L
Sbjct: 181 PSTIDVAASAGANCIVAGSSIFGAADPGAIISVLRK 216
>gi|325261905|ref|ZP_08128643.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
gi|324033359|gb|EGB94636.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
Length = 220
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/216 (41%), Positives = 136/216 (62%), Gaps = 2/216 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF LGE+I + GA+ +HFDVMDG FVP+ISFG V++S++ S V
Sbjct: 4 ILAPSILSADFKILGEQIRITSDHGAEYLHFDVMDGMFVPSISFGMPVLKSIQGVSSQVM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ ++ +AG DI+T H E+ ++ L IHA G K GV+I P TPV
Sbjct: 64 DVHLMVTDPGRYVEDFQEAGADILTVHLEACEDVQAVLDKIHACGIKAGVSIKPATPVEE 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L V+D+ +M LIM+V PGFGGQ I ++ KI+ ++++ +R + +EVDGG+ N+
Sbjct: 124 LLPVLDQAEMFLIMSVEPGFGGQAFIPESLEKIKNLRSMLDERGLNADIEVDGGIYQSNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
K ++ AGA+++V GS+ F + + LK++
Sbjct: 184 KEVLDAGANIIVAGSAVFKGGIAENVTGLMEILKEN 219
>gi|328767260|gb|EGF77310.1| hypothetical protein BATDEDRAFT_13975 [Batrachochytrium
dendrobatidis JAM81]
Length = 222
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 130/222 (58%), Gaps = 5/222 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVM---DGCFVPNISFGADVIRSLR 58
P +I PS+L++DF+ L E + AGA +H DVM DG FVPN++ GA +++ LR
Sbjct: 1 MPVAKIAPSMLSSDFACLASEAKRMVDAGADYLHMDVMVSLDGHFVPNLTLGAPIVKCLR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
++D+ DCHLM+++ + ++ A AG + TFH E++ + + + I A G K G+++
Sbjct: 61 KHTDAFLDCHLMVTNPEQWVDSFAAAGASLFTFHIEATDNASKLIDRIQATGMKVGISLK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P+T + + D+I +D +LIMTV PGFGGQ+++ + K+ ++ ++ ++VDGG+
Sbjct: 121 PKTEIETIIDLIPRLDQVLIMTVEPGFGGQKMMPECLEKVAALRSKF--PNLDIQVDGGI 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI +AGA+++V G+ F + + D A
Sbjct: 179 DIHNIGLAAKAGANVIVSGTGIFGHPSAPLAIQTMRDAINKA 220
>gi|330805967|ref|XP_003290947.1| ribulose phosphate 3-epimerase [Dictyostelium purpureum]
gi|325078908|gb|EGC32535.1| ribulose phosphate 3-epimerase [Dictyostelium purpureum]
Length = 228
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 126/219 (57%), Gaps = 6/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PS+L++DFS L + + + GA +H DVMDG FVPN++ GA VI+SLR +
Sbjct: 1 MSIKPIICPSLLSSDFSFLARDANYMLDCGADWLHMDVMDGHFVPNLTIGAPVIKSLRKH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAI 117
+ DCHLM+++ + I AG D ITFH E + + ++ I G + +++
Sbjct: 61 TKGHLDCHLMVTNPELMIEDFKSAGADSITFHIEVTEERGITNQVIKKIKDAGMQVAISV 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P+TP+ + ID++D +LIMTV PGFGGQ ++ +PK++ + +++++VDGG
Sbjct: 121 KPKTPIESIFPYIDQLDFVLIMTVEPGFGGQSFMKDMMPKVKLLRQ--KYPNLNIQVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLND 215
+ I QAGA+++V GS+ F + K D
Sbjct: 179 LDPNTIDEAAQAGANVIVAGSALFKPNQDPKDTIKLFKD 217
>gi|325179807|emb|CCA14210.1| ribulosephosphate 3epimerase putative [Albugo laibachii Nc14]
Length = 226
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PS+LA+D + + +E + +GA +H DVMDG FVPNIS+GA VI+ LR ++
Sbjct: 6 PCKIGPSLLASDLASIKDEALKVLNSGADYLHLDVMDGHFVPNISWGAPVIKCLRMHTPK 65
Query: 64 -VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD H+M+S + + IADAG D TFH E++ + + I K GVAI PET
Sbjct: 66 AFFDVHMMVSEPEKWVQDIADAGGDQFTFHFEATKDPKALIEQIRKAKMKVGVAIKPETE 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V + ++ +DM+L+MTV PGFGGQ + + +PKI + ++ +EVDGG+
Sbjct: 126 VEQVFPLVHLVDMVLVMTVEPGFGGQVFMANMMPKIESLRK--SYPTLDIEVDGGLGPST 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +AGA+++V GSS F + +L
Sbjct: 184 IDIASKAGANMIVAGSSVFRADDPATVIAQLR 215
>gi|121716430|ref|XP_001275806.1| ribulose-phosphate 3-epimerase [Aspergillus clavatus NRRL 1]
gi|119403963|gb|EAW14380.1| ribulose-phosphate 3-epimerase [Aspergillus clavatus NRRL 1]
Length = 250
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 86/246 (34%), Positives = 128/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M P I PSIL+ADF+ LG E S GA +H D+MDG FVPNI+FGA V+ +R
Sbjct: 1 MAPPAIIAPSILSADFAVLGNECSTKIAQGADWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 59 ------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
+ FDCH+MI + AGCD+ FH E++
Sbjct: 61 VERPTQPHGKGTFDCHMMIMEPHKWVKEFKSAGCDLYCFHYEAAVSSVAATTPEDKETTR 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+AI P+TPV +L D++ + DM+L+MTV+PGFGGQ+
Sbjct: 121 RTSPKELIRYIHEEGMQAGIAIKPDTPVDVLWDILENKDEKERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ + +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVKALRERY--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGAQDPADV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|296140263|ref|YP_003647506.1| ribulose-phosphate 3-epimerase [Tsukamurella paurometabola DSM
20162]
gi|296028397|gb|ADG79167.1| ribulose-phosphate 3-epimerase [Tsukamurella paurometabola DSM
20162]
Length = 228
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 120/225 (53%), Gaps = 7/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNIT-KAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ + I PSIL+ADF+RLG EI + GA +H DVMD FVPN++ G V++SL +
Sbjct: 4 MSSPM-IAPSILSADFARLGAEIDAVGGPEGADWVHVDVMDNHFVPNLTLGLPVVQSLLT 62
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ DCHLMI A+AG +TFH E++ + I A G K G+AI P
Sbjct: 63 ATTIPLDCHLMIDEPGRWAPPYAEAGAHNVTFHAEATDDPVAVAKDIRAAGGKAGLAIKP 122
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGG 177
T +V+ D +L+M+V PGFGGQ I + K R A+ L+ + L E+DGG
Sbjct: 123 GTAFEPYIEVLKSFDTLLVMSVEPGFGGQSFIADVLDKARAARKLVDSDELKLLVEIDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + I+ AG D V GS+ +N A+ + L+ A A
Sbjct: 183 INADTIEQAAAAGVDCFVAGSAVYNAADP---AEAVRKLRAQAAA 224
>gi|134107273|ref|XP_777521.1| hypothetical protein CNBA6440 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260215|gb|EAL22874.1| hypothetical protein CNBA6440 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 224
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 74/224 (33%), Positives = 125/224 (55%), Gaps = 5/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I I PS+LA+D S L E + G +H DVMDG FVPNI+ GA ++ +
Sbjct: 1 MSKAI-ISPSVLASDLSDLSNECRRMMANGCDWLHMDVMDGHFVPNITMGAPILEHVYKN 59
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ DCH+M+S+ + +A AG + TFH E++ + + +H+ G+AI+P
Sbjct: 60 VPNIFMDCHMMVSNPSQWVPEVAKAGGKLYTFHYEATEEPEKVIELVHSHNMLAGLAISP 119
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
ETP + + D + + D++L+MTV PG GGQ+ + + K+++ + ++ ++VDGGV
Sbjct: 120 ETPASAITDSLGKAADLLLVMTVRPGRGGQKFMPECLEKVKELRERFPGKN--IQVDGGV 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
S N QAG+++LV G++ F K + + A+A
Sbjct: 178 GSGNACQCAQAGSNVLVAGTAIFGAKDPKQTIQEMRTAVDGAIA 221
>gi|45198313|ref|NP_985342.1| AFL208Cp [Ashbya gossypii ATCC 10895]
gi|51701884|sp|Q755M2|RPE_ASHGO RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|44984200|gb|AAS53166.1| AFL208Cp [Ashbya gossypii ATCC 10895]
Length = 239
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 76/226 (33%), Positives = 124/226 (54%), Gaps = 14/226 (6%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M I I PSILA+DF+ L + AGA+ +H DVMDG FVPNI+ G +++SLR
Sbjct: 1 MVKPI-IAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKA 59
Query: 60 ----------YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
+ FDCH+M++ + +++ + G D TFH E++ + ++ I +
Sbjct: 60 VPRVGDKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYEATKNPLELVKLIKSR 119
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
G + AI P+TPV +L ++ +DM L+MTV PGFGGQ+ + +PK+ + +
Sbjct: 120 GIRAACAIKPDTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVAALREKFPQ-- 177
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++VDGG+ I +AGA+++V G+S F + + D
Sbjct: 178 LDIQVDGGLGKETIPHAAKAGANVIVAGTSVFAAADQKDVISYMKD 223
>gi|71021427|ref|XP_760944.1| hypothetical protein UM04797.1 [Ustilago maydis 521]
gi|46101019|gb|EAK86252.1| hypothetical protein UM04797.1 [Ustilago maydis 521]
Length = 311
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-Y 60
P+ +I PS+LA+D L E + +GA +H D+MDG FVPNI GA VI S+
Sbjct: 1 MPATKIAPSVLASDLGNLNCECQRMMDSGADWLHMDIMDGHFVPNIVMGAPVIASVSKAV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ DCH+M+S + I++AG TFH E++ +R I A + VAINP
Sbjct: 61 PNIFMDCHMMVSDPGKWVKDISEAGGASYTFHLEATDDPMDVVRQIKATKMRAAVAINPG 120
Query: 121 TPVAILEDVI-DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP + + D + + +DMIL+MTV PG GGQ+ ++ +PK+ + +A + +EVDGGV
Sbjct: 121 TPASEISDELGNAVDMILVMTVWPGAGGQKFMKECMPKVAELRARF--PDLDVEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I AGA+++V G++ FN K L
Sbjct: 179 PKTIDRCADAGANIIVAGTAIFNHSSPKDVIKFLR 213
>gi|256825116|ref|YP_003149076.1| ribulose-5-phosphate 3-epimerase [Kytococcus sedentarius DSM 20547]
gi|256688509|gb|ACV06311.1| ribulose-5-phosphate 3-epimerase [Kytococcus sedentarius DSM 20547]
Length = 223
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 83/224 (37%), Positives = 130/224 (58%), Gaps = 4/224 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S+ + PSILA+DF+RLGEE++ I A A H DVMD FVPN++ G V+ +L+
Sbjct: 1 MSRSVSLHPSILASDFTRLGEELTRI--ATADAAHVDVMDNHFVPNLTIGMPVVEALQEV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI+ +D A+ G +TFH E+S R+ R I + G + +A+ P
Sbjct: 59 TPIPLDLHLMIAEVDRWGPRYAETGAHSVTFHVEASDDPRQLARDIRSTGARAAMALKPG 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T A D++ E+DM+L+MTV PGFGGQ + + +R+ + +G++ + ++VDGGV
Sbjct: 119 TAFADYADLLPELDMVLVMTVEPGFGGQSFMPGQLAVVREVRQAVGEQGLDVAIQVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I +AGAD+ V GS+ F + + L + A+A
Sbjct: 179 NAETIVDSARAGADVFVAGSAVFGAQDLAAAITDLRERAAGAVA 222
>gi|257440063|ref|ZP_05615818.1| ribulose-phosphate 3-epimerase [Faecalibacterium prausnitzii
A2-165]
gi|257197415|gb|EEU95699.1| ribulose-phosphate 3-epimerase [Faecalibacterium prausnitzii
A2-165]
Length = 216
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 120/204 (58%), Gaps = 3/204 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
I PSIL+ADF++LG + + AGA+ +H+DVMDG FVPNISFG V++SL +
Sbjct: 3 IISPSILSADFNQLGADCRMVLDAGAQMLHYDVMDGHFVPNISFGVPVLKSLHKGMPAAF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+D HLMIS + AG + FH E I++++ + A+G K G+ I P T
Sbjct: 63 YDVHLMISHPLQYAEPFIKAGASLYNFHLECEDDIQQTIDAVKALGCKVGLTIKPGTAPE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L +D++D++L+M+V PGFGGQ+ + S + K+R K KRS LEVDGGV
Sbjct: 123 ALAPYLDQLDLVLVMSVEPGFGGQKFMPSALEKLRWLKEERAKRSARYLLEVDGGVDDTT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGE 206
V+AGAD+LV GS+ F
Sbjct: 183 APLCVEAGADILVAGSAVFGAADP 206
>gi|227504401|ref|ZP_03934450.1| ribulose-phosphate 3-epimerase [Corynebacterium striatum ATCC 6940]
gi|227199049|gb|EEI79097.1| ribulose-phosphate 3-epimerase [Corynebacterium striatum ATCC 6940]
Length = 221
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 83/221 (37%), Positives = 126/221 (57%), Gaps = 7/221 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ I PSILAADFSRLGEE+ + A IH D+MDG FVPN+SFG D+ +++ +
Sbjct: 1 MPAPIISPSILAADFSRLGEEVRAV--HNADWIHVDIMDGHFVPNLSFGPDITKTVDGIT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAIN 118
D V D HLMI + + A+AG D I FH E+ +L I MG + G +I
Sbjct: 59 DQVLDVHLMIEEPEKWVETYAEAGADCIIFHVEAVADEHAALALADQIRGMGVRAGFSIK 118
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TP+ D ++ D+ L+M+V PGFGGQ+ + + K+R +A I ++ + +E+DG
Sbjct: 119 PNTPIEPWLDKLEHFDLALVMSVEPGFGGQKFMPEMLDKVRTLRAAIDEQGLDTLIEIDG 178
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G+++ I + +AG V GS+ + Q + + + L L
Sbjct: 179 GISAETIAASAEAGCHAFVAGSAIYKQADKAAAVEELRQLA 219
>gi|283853668|ref|ZP_06370900.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. FW1012B]
gi|283570939|gb|EFC18967.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. FW1012B]
Length = 224
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 97/224 (43%), Positives = 138/224 (61%), Gaps = 5/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + PS+L+ADFSRL +E++ + AG H DVMDG FVPNI+FG VI +LR
Sbjct: 1 MTAPFILSPSLLSADFSRLADELAALAAAGLTWAHLDVMDGLFVPNITFGPPVIAALRRV 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S FD HLMI + ++ DAG D+I H E++ H+ R++ I +G VA+NP
Sbjct: 61 SSLYFDTHLMIERPERYLAAFRDAGADLICVHAEATVHLERTVAEIRRLGAAPAVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
T ++ +E ++ E+DM+LIMTVNPGFGGQ + + K+R A+ +R + ++VDGGV
Sbjct: 121 THLSAVEYLLPELDMVLIMTVNPGFGGQSFLPFCLEKVRTLSAMRRERGLSFRIQVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
T N +LV AGAD+LV GS+FF Y +RL+ +A
Sbjct: 181 TPGNTAALVAAGADVLVSGSAFFGHP---PYKERLDVFHAAAAT 221
>gi|290562469|gb|ADD38630.1| Ribulose-phosphate 3-epimerase [Lepeophtheirus salmonis]
Length = 233
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 132/221 (59%), Gaps = 8/221 (3%)
Query: 1 MTPSI--QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+ I +I PSIL AD S+LG E + GA +H DVMDG FVPN++FGA +++ LR
Sbjct: 1 MSNVITPKIGPSILNADLSQLGTESQCLLDYGADYLHLDVMDGHFVPNLTFGAPLVKCLR 60
Query: 59 SYSD-SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
S ++FD H+M+++ + + +++AG D TFH E++ R I G K G+AI
Sbjct: 61 SKVKQAMFDMHMMVANPEKWVEDMSNAGADQYTFHIETTNDPLGLCRQIRESGMKVGIAI 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P+TPV+++E ID DMIL+MTV PGFGGQ+ + + K+ + S+ +EVDGG
Sbjct: 121 KPKTPVSVVEQYIDSADMILVMTVEPGFGGQKFMHDMMEKVSYLRD--NYPSLDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V NI +AGA+++V G++ + + D++K
Sbjct: 179 VGPSNILDCAKAGANMIVSGTAIVKSNDPKT---IMYDMRK 216
>gi|332685784|ref|YP_004455558.1| ribulose-phosphate 3-epimerase [Melissococcus plutonius ATCC 35311]
gi|332369793|dbj|BAK20749.1| ribulose-phosphate 3-epimerase [Melissococcus plutonius ATCC 35311]
Length = 216
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++VPSIL A+F+ L +EI + AG + +H DVMDG FVPNI+FG V+ S+ S ++
Sbjct: 1 MKLVPSILNANFANLEKEIKTVEMAGIEALHIDVMDGQFVPNITFGPSVVSSIHSITNLS 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI +++I+ +AG + I H ES+PHI R ++ I G + G+ +NP T +
Sbjct: 61 LDIHLMIIQPENYIDQFIEAGANTINVHQESTPHIYRCMQMIKDKGARAGIVLNPGTSID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRN 182
+ ++ +D ILIMTVNPGFGGQ I+ T+ KI + L + +EVDGG+
Sbjct: 121 TIIPILHLVDQILIMTVNPGFGGQTFIDFTLKKIAELSELKKLNGYHYEIEVDGGIIPET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA + V GS ++ L +
Sbjct: 181 ALLCKKAGATMFVSGSYIYDANDPRERIAALRE 213
>gi|326515430|dbj|BAK03628.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 128/230 (55%), Gaps = 18/230 (7%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + + GA +H DVMDG FVPN++ GA VI SLR ++ +
Sbjct: 10 KIAPSMLSSDFANLASEAERMVRLGADWLHMDVMDGHFVPNLTIGAPVIESLRKHTKAYL 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ AG TFH E + + + +++I A G + GV++ P TPV
Sbjct: 70 DCHLMVTNPSDYVEAFGKAGASGFTFHIEVTRDNWKELIQSIKAKGMRPGVSLKPGTPVE 129
Query: 125 ILEDVID---EIDMILIMTVNPGFGGQQLIESTIPK---------IRQAKALIGKRSISL 172
+ +++ ++++L+MTV PGFGGQ+ + + K +R + S+ +
Sbjct: 130 DVFPLVEAETPVELVLVMTVEPGFGGQKFMPEMMDKVIPSKFFWGVRTLRK--KYPSLDI 187
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
EVDGG+ I AGA+ +V GSS F + ++ L+KS A
Sbjct: 188 EVDGGLGPSTIDVAASAGANCIVAGSSVFGAADP---GQVISALRKSVEA 234
>gi|312215711|emb|CBX95663.1| similar to ribulose-phosphate 3-epimerase [Leptosphaeria maculans]
Length = 252
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 87/245 (35%), Positives = 130/245 (53%), Gaps = 32/245 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG+ S+ GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFGALGKACSDTMAQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VDRPLTAHGRGTFDCHMMIAEPKKWVRDFKKAGCDLYCFHYEAAISSTAAESPSGKSDRK 120
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQL 150
+ +R IH G + G+AI P TPV +L D++ + DM+L+MTV PGFGGQ
Sbjct: 121 TSPKELIRYIHNEGMQAGIAIKPSTPVDVLWDILANPVKEEVPDMVLVMTVEPGFGGQSF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ S +PK+ + + + +EVDGG++ + I AGA+++V GS+ F
Sbjct: 181 MASELPKVTALRQKYPE--LHIEVDGGLSEKTIDQAANAGANVIVAGSAVFGASDPGEVI 238
Query: 211 KRLND 215
++L D
Sbjct: 239 QKLRD 243
>gi|257092790|ref|YP_003166431.1| Ribulose-phosphate 3-epimerase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045314|gb|ACV34502.1| Ribulose-phosphate 3-epimerase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 229
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 138/222 (62%), Gaps = 9/222 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+RLGEE+ N+ AGA IHFDVMD +VPN++ G V ++R +++ D
Sbjct: 4 IAPSILSADFARLGEEVVNVIAAGADWIHFDVMDNHYVPNLTIGPLVCAAIRPLTEAPID 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ +D + A AG +IITFHPE+S H+ R+L I G ++G+ NP TP+ +
Sbjct: 64 VHLMVRPVDRIVPDFAKAGANIITFHPEASEHVDRTLALIRENGCQSGLVFNPATPLDYM 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTS 180
+ V+D++D++L+M+VNPGFGGQQ I ST+ K+ A+A I R I LEVDGGV
Sbjct: 124 DYVMDKLDIVLLMSVNPGFGGQQFIASTLAKLAAARARIDAYERSSGRRIRLEVDGGVKI 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK---GEISYAKRLNDLKKS 219
NI + +AGAD V GS+ F Y + L+
Sbjct: 184 DNIAEIARAGADAFVAGSAVFGAGRDSDANRYDTVIAALRAQ 225
>gi|206896452|ref|YP_002246732.1| ribulose-phosphate 3-epimerase [Coprothermobacter proteolyticus DSM
5265]
gi|206739069|gb|ACI18147.1| ribulose-phosphate 3-epimerase [Coprothermobacter proteolyticus DSM
5265]
Length = 220
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 132/214 (61%), Gaps = 4/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++VPS+L+AD L +++ + + +H DVMDG FVPNIS G ++ SLR +SD
Sbjct: 3 KLVPSLLSADLWCLKDQLDVLKQYQVDTLHVDVMDGNFVPNISMGVPLVESLRKHSDFSL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI++ + I +AG D++T H E++ HI R ++ I +G K GV++NP TP+ +
Sbjct: 63 DVHLMIANPERFIETFREAGADLLTVHIEATYHIHRLIQQIRNVGCKAGVSLNPGTPLEL 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRN 182
++ ++ +D++L+M+VNPGFGGQ + T+ K++ +R +EVDGG+ N
Sbjct: 123 IKPILHMVDLVLVMSVNPGFGGQDFLPETLSKVKMLHQWKQEREDYKYIVEVDGGINRSN 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ ++ AGA+ +V GS F + +LN++
Sbjct: 183 VEQVLNAGAEWIVSGSGVFKG-DLKTNLDQLNEI 215
>gi|218132881|ref|ZP_03461685.1| hypothetical protein BACPEC_00742 [Bacteroides pectinophilus ATCC
43243]
gi|217991754|gb|EEC57758.1| hypothetical protein BACPEC_00742 [Bacteroides pectinophilus ATCC
43243]
Length = 216
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 139/214 (64%), Gaps = 2/214 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF+ LGE+I + KAGA+ IH DVMDG FVP+IS+G VI+S+R +D+VF
Sbjct: 3 ILAPSILSADFNVLGEQIQTVAKAGAQYIHVDVMDGIFVPSISYGMPVIKSVRKSTDAVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ +I D+G DIIT H E+ I ++R I A G K VAINPETPV
Sbjct: 63 DVHLMITEPVRYIRDFVDSGADIITVHVEACKDIDETIRDIKACGVKAAVAINPETPVDK 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+ +D+IDM L+M+V+PGFGGQ+ I + K+R ++ ++ +E+DGG+ N+
Sbjct: 123 IMPYLDDIDMALVMSVHPGFGGQKFIPDVLDKVRIIRSYYRDNNMDKDIEIDGGINFDNL 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+++AGA+++V GSS + + K L ++
Sbjct: 183 PEVLEAGANVIVAGSSVYRGDAAANTKKFLELMR 216
>gi|168703187|ref|ZP_02735464.1| Ribulose-phosphate 3-epimerase [Gemmata obscuriglobus UQM 2246]
Length = 218
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 129/218 (59%), Gaps = 4/218 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSILAADFS+LGE + +TKAGA +IH DVMDG FVPN+S GA V+ LR +
Sbjct: 1 MIAPSILAADFSKLGELVREVTKAGADRIHVDVMDGHFVPNLSMGAVVVEGLRPVTTIPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI-HAMGKKTGVAINPETPVA 124
+ HLM+ ++ AG D + H E P R + I A+GKK G+A NP+ PV
Sbjct: 61 EVHLMVEDPGRFLDGFVKAGADTLIVHLEVLPDPRPMVEHIKKALGKKVGLAFNPDMPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E + +ID+ L MTV PGFGGQ I ++ ++R+ KALIG + +EVDGG+ ++
Sbjct: 121 RIEPYLKDIDLALCMTVFPGFGGQAFIPESLERLRKLKALIGAHNPACEIEVDGGIGAKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLKKS 219
I AGA++ V GS+ F K G + K L L K
Sbjct: 181 IADCAAAGANVFVAGSAVFGAKQGPAAAMKDLIALAKQ 218
>gi|237752713|ref|ZP_04583193.1| ribulose-phosphate 3-epimerase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376202|gb|EEO26293.1| ribulose-phosphate 3-epimerase [Helicobacter winghamensis ATCC
BAA-430]
Length = 211
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 127/215 (59%), Gaps = 6/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+A+F +L E+ I A +H DVMDG FVPN++ G V+ S+ S
Sbjct: 1 MLVAPSILSANFGKLEAEVQAICAADCDFVHIDVMDGHFVPNLTLGPVVVESVVKASTKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A + ++FH E H R ++ I +G K V +NP T +
Sbjct: 61 LDIHLMVQNNSFFVDLFAPFKPEFLSFHIEEEKHANRLVQKIRDLGIKPAVVLNPHTGIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
+E +++ +DM+L+M+VNPGFGGQ+ I + + KI++ K I +EVDGGV+S N
Sbjct: 121 SIEYLLEVVDMVLVMSVNPGFGGQKFIPNVLEKIKRLKDRIEIWNPKCLIEVDGGVSSAN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+ L +AG D++V GS F+ YA+++ LK
Sbjct: 181 IELLREAGVDIVVAGSYVFSG----DYAQKIASLK 211
>gi|225710652|gb|ACO11172.1| Ribulose-phosphate 3-epimerase [Caligus rogercresseyi]
gi|225711048|gb|ACO11370.1| Ribulose-phosphate 3-epimerase [Caligus rogercresseyi]
Length = 230
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSV 64
+I PSIL D +L E ++ GA +H DVMDG FVPN++FGA V++ LR ++
Sbjct: 9 RIGPSILNTDLCQLANESQSLLDHGADYLHLDVMDGHFVPNLTFGAPVVKCLRSKVKKAM 68
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M+ + + ++DAG D TFH E++ R I G K G+ I P+TPV+
Sbjct: 69 FDMHMMVQHPEKWVKDMSDAGADQYTFHIEATEDPLALCRRIRESGMKVGIGIKPKTPVS 128
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+E ID DMIL+MTV PGFGGQ+ +E + K+ + ++ +EVDGGV + NI+
Sbjct: 129 AVEQYIDSADMILVMTVEPGFGGQKFMEDMMEKVSYLREH--HPNLDIEVDGGVGTGNIR 186
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA+++V G++ S + DL+ +
Sbjct: 187 QCAKAGANMIVSGTAIVKASDPGSV---IRDLRTA 218
>gi|56707900|ref|YP_169796.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670371|ref|YP_666928.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis FSC198]
gi|134301646|ref|YP_001121614.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187931752|ref|YP_001891737.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254370391|ref|ZP_04986396.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis FSC033]
gi|56604392|emb|CAG45422.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320704|emb|CAL08805.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis FSC198]
gi|134049423|gb|ABO46494.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151568634|gb|EDN34288.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis FSC033]
gi|187712661|gb|ACD30958.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|282159085|gb|ADA78476.1| ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis NE061598]
Length = 222
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 134/219 (61%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI PSIL+AD +RLG+++ + AGA IHFDVMD +VPN++FG V+++LR Y
Sbjct: 1 MKHIQINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ +D+ I A AG I FHPE+S HI RSL+ I + G + G+A+NP
Sbjct: 61 ITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
T + L+ V ID +LIM+VNPGFGGQ+ I + + K ++ I R I LE+DGGV
Sbjct: 121 TGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + G + V GS+ FN SY + ++ ++
Sbjct: 181 NPYNIAEIAVCGVNAFVAGSAIFNSD---SYKQTIDKMR 216
>gi|313158974|gb|EFR58351.1| ribulose-phosphate 3-epimerase [Alistipes sp. HGB5]
Length = 216
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 130/210 (61%), Gaps = 2/210 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADF L + I ++ A+ +H DVMDG FVPNISFG V++++R +
Sbjct: 4 IVAPSMLSADFGHLERDTQMIDRSAAEWVHIDVMDGVFVPNISFGFPVLKAIRKATAKCL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++ A+AG D++TFH E++ + + + I G K GV+I P T V +
Sbjct: 64 DVHLMIVEPERYVARFAEAGADVVTFHYEATYNPKGCIEMIRNAGAKVGVSIKPATSVEV 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L D++ +ID++LIM+V PGFGGQ I +++ KI Q +AL + +EVDGG++S N
Sbjct: 124 LRDILPQIDLVLIMSVEPGFGGQAFIPASLEKIAQLRALADELGTETIIEVDGGISSHNA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGAD+LV G++ F + + ++
Sbjct: 184 HEVFGAGADVLVAGNAVFGAEDPQAEIVKM 213
>gi|58584494|ref|YP_198067.1| Pentose-5-phosphate-3-epimerase [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58418810|gb|AAW70825.1| Pentose-5-phosphate-3-epimerase [Wolbachia endosymbiont strain TRS
of Brugia malayi]
Length = 226
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 138/227 (60%), Gaps = 13/227 (5%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+A+F++LGEE+ I G IH DVMDG FVPNI+ G VI ++R Y++
Sbjct: 3 IKIAPSILSANFAKLGEEVKRINNLGVDYIHIDVMDGNFVPNITIGPGVISTIRKYTNLF 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG--------KKTGVA 116
FD HLMI S H+ +AG DIIT H E+ H+ R +R I + + GV+
Sbjct: 63 FDVHLMIKSPGDHVESFINAGADIITIHAEAEVHLERLIRKIKSYKNVNDAKKKVQVGVS 122
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
I P T I E +I E+D++LIMTVNPGFGGQ+ I S + KI K +I +R + + V
Sbjct: 123 IVPSTSPGIFEYIIHELDIVLIMTVNPGFGGQEFIYSQLGKISVVKKMIRERGLKTQISV 182
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
DGGV+ N +++AGAD+LV GS+ F K K +ND K +L
Sbjct: 183 DGGVSLSNAADIIKAGADILVAGSAIFRAKN---MKKAVNDFKNLSL 226
>gi|225714476|gb|ACO13084.1| Ribulose-phosphate 3-epimerase [Lepeophtheirus salmonis]
Length = 233
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 132/221 (59%), Gaps = 8/221 (3%)
Query: 1 MTPSI--QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+ I +I PSIL AD S+LG E + GA +H DVMDG FVPN++FGA +++ LR
Sbjct: 1 MSNVITPKIGPSILNADLSQLGTESQCLLDHGADYLHLDVMDGHFVPNLTFGAPLVKCLR 60
Query: 59 SYSD-SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
S ++FD H+M+++ + + +++AG D TFH E++ R I G K G+AI
Sbjct: 61 SKVKQAMFDMHMMVANPEKWVEDMSNAGADQYTFHIETTNDPLGLCRQIRESGMKVGIAI 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P+TPV+++E ID DMIL+MTV PGFGGQ+ + + K+ + S+ +EVDGG
Sbjct: 121 KPKTPVSVVEQYIDSADMILVMTVEPGFGGQKFMHDMMEKVSYLRD--NYPSLDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V NI +AGA+++V G++ + + D++K
Sbjct: 179 VGPSNILDCAKAGANMIVSGTAIVKSNDPKT---IMYDMRK 216
>gi|15645996|ref|NP_208177.1| ribulose-phosphate 3-epimerase [Helicobacter pylori 26695]
gi|2829457|sp|P56188|RPE_HELPY RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2314553|gb|AAD08425.1| D-ribulose-5-phosphate 3 epimerase (rpe) [Helicobacter pylori
26695]
Length = 217
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 75/217 (34%), Positives = 125/217 (57%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + A II+ H E+ H R L+ I +G G+ +NP T
Sbjct: 59 LDVHLMVENASFFAELFAPLKPQIISIHAENEKHPHRVLQLIKNLGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I L QAG D++V GS F K + L ++++S
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQS 215
>gi|148256633|ref|YP_001241218.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
gi|146408806|gb|ABQ37312.1| ribulose-5-phosphate 3-epimerase [Bradyrhizobium sp. BTAi1]
Length = 233
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 106/207 (51%), Positives = 142/207 (68%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + AGA IH DVMDG FVPNIS+G DVI++LR ++
Sbjct: 8 RPLVIAPSILASDFSKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKALRPHTT 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP
Sbjct: 68 KIFDAHLMITPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNPSTP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++E V+D +D++LIM+VNPGFGGQ I S I KI+ +A+ R I +EVDGGV N
Sbjct: 128 LNVIEYVLDLVDLVLIMSVNPGFGGQAFIPSAIGKIQDLRAMTAGRPIDIEVDGGVGRDN 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISY 209
+L AGA+ V GS+ F +Y
Sbjct: 188 AGALAAAGANAFVAGSAVFKGGTMEAY 214
>gi|150866849|ref|XP_001386579.2| D-ribulose-5-phosphate 3- epimerase [Scheffersomyces stipitis CBS
6054]
gi|149388105|gb|ABN68550.2| D-ribulose-5-phosphate 3- epimerase [Scheffersomyces stipitis CBS
6054]
Length = 232
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 126/216 (58%), Gaps = 8/216 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD--- 62
I PSILA+DF+ LG I GA+ +H DVMDG FVPNIS GA +I SLR
Sbjct: 5 IISPSILASDFANLGSHCKCIVNGGAEWLHLDVMDGHFVPNISLGAPIIASLRKQFPRSD 64
Query: 63 ---SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
FDCH+M+S+ + I IA AG D TFH E++ R+++ + A G K GV++ P
Sbjct: 65 PNPVFFDCHMMVSNPEQWIEDIAKAGGDGYTFHFEATDDALRTIKKVKAAGMKVGVSVKP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV +L +++EID+ L+MTV PGFGGQ+ + + K+ + +++EVDGG+
Sbjct: 125 KTPVEVLFPIVEEIDLALVMTVEPGFGGQKFMPEMMAKVEILRN--KYPDLNIEVDGGLA 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA+++V G+S F + L
Sbjct: 183 KDTIDAAAKAGANVIVGGTSVFGAENPAEVIDFLRS 218
>gi|227513471|ref|ZP_03943520.1| ribulose-phosphate 3-epimerase [Lactobacillus buchneri ATCC 11577]
gi|227083344|gb|EEI18656.1| ribulose-phosphate 3-epimerase [Lactobacillus buchneri ATCC 11577]
Length = 217
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I SIL+AD+ L +I + K GA+ +H D+MDG FVP +S+G +++++ ++
Sbjct: 2 IKIATSILSADYVNLQRDIEKVDKGGAELLHIDIMDGAFVPALSYGPGWVKAIKPITNLT 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+ + + +I+ ADAG DII H E++PHI R+L+ I K V INP TPV+
Sbjct: 62 LDVHMMVQNPERYIDDFADAGADIIGVHKEATPHIHRALQMIKNRNVKAEVVINPGTPVS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ V+ +D +L+MTVNPGFGGQ+ + T+ KI + + ++ + +E+DGGV
Sbjct: 122 AITPVLYMVDQVLVMTVNPGFGGQKFLPETVKKITELDKIKKEQGLNFDIEIDGGVNETT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS FN + K L D
Sbjct: 182 VVGAYKAGATVAVAGSYIFNADDPVLKIKALKD 214
>gi|268610010|ref|ZP_06143737.1| ribulose-phosphate 3-epimerase [Ruminococcus flavefaciens FD-1]
Length = 217
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 2/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ S+L+AD L EI + +G +HFDVMDG FV NI++G ++ ++ +D + D
Sbjct: 5 VSASVLSADMLNLESEIRKMENSGIDMLHFDVMDGVFVNNITYGLAILEAVDKGTDMLLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI ++ A G DIITFH ES +++ I G K ++I P TP +
Sbjct: 65 VHLMIIDPLKYVESFAQCGADIITFHLESESDTMETIKAIKKCGVKASLSIKPGTPAEEI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
+ +DM+L+MTV PGFGGQ I T+ K++ + I + + +EVDGG+ +
Sbjct: 125 FPYLPYLDMVLVMTVEPGFGGQSFIPETLGKVKAIRDKINELGLDADVEVDGGINAETAP 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ AGA++LV GS F AK +
Sbjct: 185 LVIDAGANVLVSGSYLFKAPDMAEAAKNIKK 215
>gi|156742033|ref|YP_001432162.1| ribulose-phosphate 3-epimerase [Roseiflexus castenholzii DSM 13941]
gi|156233361|gb|ABU58144.1| Ribulose-phosphate 3-epimerase [Roseiflexus castenholzii DSM 13941]
Length = 231
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+++PSILAADF RLGE+ + +AGA +H DVMDG FVPNIS G V+ +LR D
Sbjct: 11 IRLMPSILAADFLRLGEQAREVAEAGADGLHIDVMDGLFVPNISIGIPVVAALRRAVDLP 70
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + ++ AG IT H E+ H+ R+++ IH +G GVA+NP T +
Sbjct: 71 LDCHLMIVDPERYLEAFVTAGATHITVHVEACRHLHRTIQQIHDLGVTAGVALNPATSLT 130
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTSR 181
+ED++ ++D++L+M+V+PGF GQ I + KI + + ++ + + I L+VDGG+++
Sbjct: 131 AIEDILPDLDLVLMMSVDPGFSGQTYIPRSTAKIARLRRILDECGLQHIELQVDGGISAA 190
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N+ +V AGA +V G+ FN + L
Sbjct: 191 NVADVVGAGATSIVAGTGVFNSLPIAETIQALR 223
>gi|170084769|ref|XP_001873608.1| ribulose-5-phosphate 3-epimerase [Laccaria bicolor S238N-H82]
gi|164651160|gb|EDR15400.1| ribulose-5-phosphate 3-epimerase [Laccaria bicolor S238N-H82]
Length = 227
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 82/223 (36%), Positives = 128/223 (57%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P I PS+LA+DF +L E + K GA+ +H DVMDG FVPNI+ GA ++ +
Sbjct: 1 MPRAIISPSVLASDFGQLTAECKRMIKGGAEWLHMDVMDGHFVPNITMGAPILSCVHKGV 60
Query: 62 D-SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
DCH+M++ + ++ IADAG + FH E++ + TIH K GVAI+P+
Sbjct: 61 PGIFMDCHMMVAKPEQWVDDIADAGGSLYCFHIEATSDPVSLINTIHKRNMKAGVAISPD 120
Query: 121 TPVAIL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP + +++ + DM+L+MTV PG GGQ+ IE +PK+ + +A ++ +EVDGGV
Sbjct: 121 TPSTAITDEIANAADMLLVMTVYPGRGGQKFIERCVPKVAELRARFPEK--DIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I AG +++V G++ F + + +RL D +A A
Sbjct: 179 PNTIGICADAGCNVIVAGTAIFGSENPMEVIQRLKDTVNAAQA 221
>gi|225569227|ref|ZP_03778252.1| hypothetical protein CLOHYLEM_05309 [Clostridium hylemonae DSM
15053]
gi|225162026|gb|EEG74645.1| hypothetical protein CLOHYLEM_05309 [Clostridium hylemonae DSM
15053]
Length = 220
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 137/216 (63%), Gaps = 2/216 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PSILAADF+ LGEE+ + GAK +HFDVMDG FVP+ISFG V+RS+ + +D
Sbjct: 2 EYILAPSILAADFTVLGEEMKRTAENGAKYLHFDVMDGMFVPSISFGMPVLRSIHNVTDQ 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D HLM+ ++ DAG DI+T H E+ + +L I G K G+++ PET
Sbjct: 62 VMDAHLMVQDPIRYVEDFKDAGADIVTVHLEACEDVGAALDKIRECGMKAGLSVCPETDA 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+ +E + +IDM+L+M+V+PGFGGQ+ I ++ KIR + + ++ + ++VDGG+
Sbjct: 122 SAVERYLKDIDMLLVMSVHPGFGGQKFIPESLDKIRTIRRMASEQGLGLDIQVDGGIYLS 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N++ ++ AGA+++V GS+ FN + ++ + LK
Sbjct: 182 NVREVLDAGANIIVAGSAVFNGDPGRNTSEFMEILK 217
>gi|315585932|gb|ADU40313.1| ribulose-phosphate 3-epimerase [Helicobacter pylori 35A]
gi|317179730|dbj|BAJ57518.1| ribulose-phosphate 3-epimerase [Helicobacter pylori F30]
Length = 217
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTKMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|254780065|ref|YP_003058172.1| ribulose-phosphate 3-epimerase [Helicobacter pylori B38]
gi|254001978|emb|CAX30237.1| D-ribulose-5-phosphate 3-epimerase [Helicobacter pylori B38]
Length = 217
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIRNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIRRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|156407342|ref|XP_001641503.1| predicted protein [Nematostella vectensis]
gi|156228642|gb|EDO49440.1| predicted protein [Nematostella vectensis]
Length = 233
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SD 62
S +I PSIL D S L +E + + + GA +H DVMDG FVPN++FGA +++ LR +
Sbjct: 9 SCKIGPSILNGDLSCLADECNRLLQCGADYLHLDVMDGHFVPNLTFGAPLVKCLRKKVPN 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ FD H+M+++ + ++ +A AG D TFH E++ ++ I G K G+ I P TP
Sbjct: 69 AFFDMHMMVANPEKWVDDMAGAGADQYTFHLEATDKPMELIQQIKKAGMKVGIGIKPGTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V + ++ ++M+LIMTV PGFGGQ + +PKI + R + +EVDGGV +
Sbjct: 129 VTDVLPYVEHVNMVLIMTVEPGFGGQSFMADMMPKIEFLRQ--KYRELDIEVDGGVGTST 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGA+++V GS+ L + +
Sbjct: 187 VDVAAKAGANMIVSGSAIMKSDNPRQVIALLRERAE 222
>gi|254168866|ref|ZP_04875706.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
gi|197622130|gb|EDY34705.1| ribulose-phosphate 3-epimerase [Aciduliprofundum boonei T469]
Length = 215
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 135/215 (62%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ADFSRL +EI K GA +H D+MDG FVPNI+FG VI+S+R +
Sbjct: 2 VKVSPSILSADFSRLCDEIKFCEKGGADMLHLDIMDGHFVPNITFGPVVIKSIRKCTKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D + +AG DIIT H E I+ LR IH G + G+AINPETP
Sbjct: 62 FDAHLMIERPDKFVKDFVNAGSDIITVHREIKISIKNVLRKIHNYGAEAGIAINPETPFE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +++++ +LIM+V+PGF GQ IE T+ KI++A+ I + + + VDGGV N
Sbjct: 122 KVKGHLEDVEYLLIMSVHPGFAGQSFIEDTLEKIKEARKYIDEEGLEVQIAVDGGVKHHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +V AGAD+LV S+ FN S K++ +K
Sbjct: 182 AKRIVDAGADILVAASAIFNG-NVESNIKKMKAIK 215
>gi|58259179|ref|XP_567002.1| ribulose-phosphate 3-epimerase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223139|gb|AAW41183.1| ribulose-phosphate 3-epimerase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 224
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 74/224 (33%), Positives = 125/224 (55%), Gaps = 5/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I I PS+LA+D S L E + G +H DVMDG FVPNI+ GA ++ +
Sbjct: 1 MSKAI-ISPSVLASDLSDLSNECRRMMANGCDWLHMDVMDGHFVPNITMGAPILEHVYKN 59
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ DCH+M+S+ + +A AG + TFH E++ + + +H+ G+AI+P
Sbjct: 60 VPNIFMDCHMMVSNPSQWVPEVAKAGGKLYTFHYEATEEPEKVIELVHSHNMLAGLAISP 119
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
ETP + + D + + D++L+MTV PG GGQ+ + + K+++ + ++ ++VDGGV
Sbjct: 120 ETPASAITDSLGKAADLLLVMTVRPGRGGQRFMPECLEKVKELRERFPGKN--IQVDGGV 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
S N QAG+++LV G++ F K + + A+A
Sbjct: 178 GSGNACQCAQAGSNVLVAGTAIFGAKDPKQTIQEMRTAVDGAIA 221
>gi|297380607|gb|ADI35494.1| ribulose-phosphate 3-epimerase [Helicobacter pylori v225d]
Length = 217
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNAGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I L QAG D++V GS F K + L ++++S
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQS 215
>gi|188997412|ref|YP_001931663.1| Ribulose-phosphate 3-epimerase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932479|gb|ACD67109.1| Ribulose-phosphate 3-epimerase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 220
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 87/201 (43%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFS LG++I + +AGA IH D+MDG +VPNI+FG V+ S+R +D FD
Sbjct: 4 LAPSILSADFSILGQQIKEVEEAGADIIHLDIMDGRYVPNITFGPPVVESIRKITDLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I AG ++I+FH +++ H R + I + K GV +NP TPV L
Sbjct: 64 AHLMIVEPEKYIPDFIKAGVNMISFHMDATIHAHRVVDMIKSNDVKAGVVLNPATPVNTL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRNI 183
E++I ID +LIM+VNPGFGGQ+ I T K+++ K L+ + + I +E+DGGV NI
Sbjct: 124 EEIIYYIDYVLIMSVNPGFGGQKFIPQTAEKVKKLKLLMEETNRTDILIEIDGGVNQDNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
L G ++ V G++ F
Sbjct: 184 NYLSMLGVNIFVAGNAVFKGN 204
>gi|291276270|ref|YP_003516042.1| ribulose-phosphate 3-epimerase [Helicobacter mustelae 12198]
gi|290963464|emb|CBG39294.1| ribulose-phosphate 3-epimerase [Helicobacter mustelae 12198]
Length = 212
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+A+F RLGEEI + AGA +H DVMDG FVPN++FG V+ + Y+
Sbjct: 1 MLVAPSLLSANFMRLGEEIRALCDAGADFLHIDVMDGHFVPNLTFGPVVLEQIAKYASKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++ + + A + ++ H E H+ R + +I G + V +NP +
Sbjct: 61 LDVHLMVENVSFFVELFAPLKPEFMSVHIEEVKHLHRVIESIRKHGIRPCVVLNPHSSEQ 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ ++++IDM+L+M+VNPGFGGQ+ I S K + I + + +EVDGGV +N
Sbjct: 121 DLKYILEDIDMVLLMSVNPGFGGQKFIPSVCKKAKMLHHRIQEYNPKCLIEVDGGVNEKN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I L ++ D++V GS FNQ Y K ++ L+
Sbjct: 181 ISLLKESMVDVVVAGSYIFNQSD---YKKAVDSLR 212
>gi|313205205|ref|YP_004043862.1| ribulose-phosphate 3-epimerase [Paludibacter propionicigenes WB4]
gi|312444521|gb|ADQ80877.1| ribulose-phosphate 3-epimerase [Paludibacter propionicigenes WB4]
Length = 216
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 129/215 (60%), Gaps = 4/215 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSILAADF L I + A+ +H D+MDG FVPNISFG V+ +++ +
Sbjct: 1 MTK--IISPSILAADFGNLQAACEMINGSEAQWLHIDIMDGSFVPNISFGFPVLEAVKKH 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI + + +I+ A AG DI+TFH E+ + + I A G K G+ INP+
Sbjct: 59 STKPLDVHLMIVNPEKYISRFAKAGADILTFHYETVENPLSVIELIRAEGIKVGITINPD 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
PV++LE +D++D++L+MTV G+GGQ+ ++++ +I + K +I ++ +EVDGGV
Sbjct: 119 VPVSVLEPFVDKVDLVLLMTVFAGYGGQKFMDNSYDRIAELKEIIERKKAHCLIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
N L ++G ++LV GS+ F + +
Sbjct: 179 NEDNASILFESGVNVLVAGSAVFGAPDPLKTIHNM 213
>gi|56755473|gb|AAW25916.1| unknown [Schistosoma japonicum]
Length = 237
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 81/220 (36%), Positives = 125/220 (56%), Gaps = 4/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+ I I PSIL AD S+L N+ +GA +H D+MDG FVPNI+ G V+ SL+ +
Sbjct: 6 SKPILIGPSILNADLSQLAVVCDNLLNSGADYLHLDIMDGHFVPNITIGHPVVASLKKHL 65
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D H+M+S + + + AG TFH ESS + ++ I K G+ I P
Sbjct: 66 PCKAFLDLHMMVSDPEKWVENMKAAGASQYTFHFESSKDVMHCIQKIREADMKVGLGIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV + +D +DM+LIMTV PGFGGQ+ + +PK+R + ++ +EVDGGVT
Sbjct: 126 KTPVTEILPYVDLVDMVLIMTVEPGFGGQKFMADMLPKVRYLRE--KYTNLDIEVDGGVT 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+NI+ V+AGA+++V G+ + + S K + +
Sbjct: 184 LKNIRDCVEAGANMIVSGTEITSHEDPASIIKLMRSSAEQ 223
>gi|169623815|ref|XP_001805314.1| hypothetical protein SNOG_15151 [Phaeosphaeria nodorum SN15]
gi|111056256|gb|EAT77376.1| hypothetical protein SNOG_15151 [Phaeosphaeria nodorum SN15]
Length = 252
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 88/249 (35%), Positives = 132/249 (53%), Gaps = 32/249 (12%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG+ S+ GA +H D+MDG FVPN++FGA V+ +R +
Sbjct: 1 MSPPAIIAPSILSADFGALGKACSDTIGQGADWLHVDIMDGHFVPNMTFGAPVVTKIRPH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VDRPANAHGKGTFDCHMMIAEPKKWVRDFKKAGCDLYCFHYEAAISSTAAESPEGKSDKK 120
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQL 150
+ ++ IHA G + G+AI P TPV +L D++D DM+L+MTV PGFGGQ
Sbjct: 121 TSPKELIKYIHAEGMQAGIAIKPSTPVDVLWDILDNPAKDEVPDMVLVMTVEPGFGGQSF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ S +PK+ + + + +EVDGG++ + I AGA+++V GS+ F
Sbjct: 181 MASELPKVSALRKKYPE--MHIEVDGGLSEKTIDQAADAGANVIVAGSAVFGASDPGEVI 238
Query: 211 KRLNDLKKS 219
K+L + +S
Sbjct: 239 KKLREAVES 247
>gi|291456819|ref|ZP_06596209.1| ribulose-phosphate 3-epimerase [Bifidobacterium breve DSM 20213]
gi|291382096|gb|EFE89614.1| ribulose-phosphate 3-epimerase [Bifidobacterium breve DSM 20213]
Length = 222
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 76/221 (34%), Positives = 120/221 (54%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I I PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +
Sbjct: 1 MSNIAIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVGRICEVT 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A G ++FH ++ R R + MG K A+ P
Sbjct: 59 DLPVDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLREMGCKASFAVRPAE 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV + D++DE DM+LIMTV PGFGGQ+ +++ + K+R+ + I +R + ++VDGGV+
Sbjct: 119 PVEPIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTRIQVDGGVS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + AGAD+LV GS+ + + + ++A
Sbjct: 179 PKTAHIVAAAGADVLVAGSAVYGAENPAQAVDDIRAKAEAA 219
>gi|315651140|ref|ZP_07904172.1| ribulose-phosphate 3-epimerase [Eubacterium saburreum DSM 3986]
gi|315486605|gb|EFU76955.1| ribulose-phosphate 3-epimerase [Eubacterium saburreum DSM 3986]
Length = 219
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 87/215 (40%), Positives = 133/215 (61%), Gaps = 6/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LAA+F L ++ + + + +H DVMDG FVP+ISFG VI SLR D FD
Sbjct: 5 IAPSLLAANFFDLSSQMKLLKEGNIEILHLDVMDGMFVPSISFGMPVISSLRKSVDFFFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ + + +I +G + IT H E+ HI R + I + G ++G+AINP TPV+ L
Sbjct: 65 VHMMVENPERYIEDFYKSGANGITIHFEACKHIDRCISLIKSFGLRSGIAINPATPVSFL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIK 184
++I E+DM+LIM+VNPGFGGQ+ I ++ K+R+ + + +++ ++VDGG+ + NIK
Sbjct: 125 HNIITEVDMVLIMSVNPGFGGQKFIPYSLDKVRELHKIKTEKNKNLIIQVDGGIGTENIK 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+L AG D V GSS F + DL+ +
Sbjct: 185 ALSDAGVDEFVAGSSIFKG----DILSNITDLRDA 215
>gi|212550551|ref|YP_002308868.1| ribulose-phosphate 3-epimerase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548789|dbj|BAG83457.1| ribulose-phosphate 3-epimerase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 216
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 87/215 (40%), Positives = 131/215 (60%), Gaps = 2/215 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S + PS+L+A+F L EEI + + A ++H D+MDG FVPNIS G ++ L S
Sbjct: 2 SFILAPSLLSANFLHLEEEIEILNGSMADRLHLDIMDGVFVPNISIGLQQVKHLSRISFK 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI I + D G +T H E+ H+ + + I G K GVA+NP TP+
Sbjct: 62 PLDAHLMIVEPQKFIGLFRDFGIQTLTIHYETCTHLHKIIMQIKENGMKVGVALNPHTPI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+L DV++E+D +LI++VNPGFGGQ+ I ++ K+ + K LI K+ ++ +EVDGG+ +
Sbjct: 122 EVLTDVLEELDRVLILSVNPGFGGQKFIPNSYSKVSRLKNLINKKELNTSIEVDGGIDIK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K +++AGA++LVVGS F K I K++ L
Sbjct: 182 TGKMMLEAGANILVVGSFIFEAKNPIEMIKQMKGL 216
>gi|197302401|ref|ZP_03167457.1| hypothetical protein RUMLAC_01129 [Ruminococcus lactaris ATCC
29176]
gi|197298522|gb|EDY33066.1| hypothetical protein RUMLAC_01129 [Ruminococcus lactaris ATCC
29176]
Length = 220
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADF LGE++ AGA+ IHFDVMDG FVP+ISFG V+ ++ Y+ + D
Sbjct: 5 LAPSILSADFKVLGEQLKVTEAAGAEYIHFDVMDGIFVPSISFGMPVLSCIKGYTSQILD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ ++ A AG DIIT H E+ ++ ++ IHA G K G++I P+TPV
Sbjct: 65 AHLMITEPIRYVEEFAKAGADIITVHLEACEDLQATIDKIHAAGVKAGISIKPKTPVEAF 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
+D+ DM L+M+V PGFGGQ I ++ +IR+ + ++ ++ + +EVDGG+ N+
Sbjct: 125 VPYLDQADMFLVMSVEPGFGGQAFIPESLDRIRELRKMLDEKGLKTDIEVDGGIYHANVA 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGA+++V GS F + + + LK
Sbjct: 185 EVLDAGANIMVSGSGIFKGDIRKNTEEFMEILK 217
>gi|56753147|gb|AAW24783.1| SJCHGC01154 protein [Schistosoma japonicum]
gi|226485661|emb|CAX75250.1| hypotherical protein [Schistosoma japonicum]
gi|226485663|emb|CAX75251.1| hypotherical protein [Schistosoma japonicum]
Length = 237
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 81/220 (36%), Positives = 125/220 (56%), Gaps = 4/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+ I I PSIL AD S+L N+ +GA +H D+MDG FVPNI+ G V+ SL+ +
Sbjct: 6 SKPILIGPSILNADLSQLAVVCDNLLNSGADYLHLDIMDGHFVPNITIGHPVVASLKKHL 65
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D H+M+S + + + AG TFH ESS + ++ I K G+ I P
Sbjct: 66 PCKAFLDLHMMVSDPEKWVENMKAAGASQYTFHFESSKDVMHCIQKIREADMKVGLGIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV + +D +DM+LIMTV PGFGGQ+ + +PK+R + ++ +EVDGGVT
Sbjct: 126 KTPVTEVLPYVDLVDMVLIMTVEPGFGGQKFMADMLPKVRYLRE--KYTNLDIEVDGGVT 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+NI+ V+AGA+++V G+ + + S K + +
Sbjct: 184 LKNIRDCVEAGANMIVSGTEITSHEDPASIIKLMRSSAEQ 223
>gi|291003623|ref|ZP_06561596.1| ribulose-phosphate 3-epimerase [Saccharopolyspora erythraea NRRL
2338]
Length = 228
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 5/214 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITK---AGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSIL+ADF+RL +E++ + A +H DVMD FVPN++ G V++SL +D
Sbjct: 1 MIAPSILSADFARLADEMAAVNGEPGHRADWLHVDVMDAHFVPNLTLGLPVVKSLLKATD 60
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLMI D A+AG +T H E++ + + A G K G++I P TP
Sbjct: 61 IPIDCHLMIEDPDRWAPGYAEAGAYNVTVHVEAAEDPVMLAKNLRAAGAKAGLSIKPNTP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTS 180
+ +V+ D +L+M+V PGFGGQ I + K+R+A+ L+ ++ +E+DGG+ +
Sbjct: 121 LEPYVEVLKHYDTLLVMSVEPGFGGQSFIADVLTKVRKARELVDTGHLNLVVEIDGGINA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I+ +AG D V GS+ + + L
Sbjct: 181 DTIEQAAEAGVDCFVAGSAVYGAGDPAQAVEALR 214
>gi|317181233|dbj|BAJ59019.1| ribulose-phosphate 3-epimerase [Helicobacter pylori F32]
Length = 217
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTKMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|297571431|ref|YP_003697205.1| ribulose-phosphate 3-epimerase [Arcanobacterium haemolyticum DSM
20595]
gi|296931778|gb|ADH92586.1| ribulose-phosphate 3-epimerase [Arcanobacterium haemolyticum DSM
20595]
Length = 221
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL DFS L E+ I + A H DVMD FVPN++ G ++ ++ S
Sbjct: 3 IRISPSILNCDFSNLTGELDKI--SNADWAHVDVMDNHFVPNLTMGVPIVEAISRVSPIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D +AG +TFH E++ R R + AMG + G+A+ P TP+
Sbjct: 61 IDTHLMIEDPDRWAPAFVEAGAQSVTFHAEAAKAPLRLARELRAMGARAGLAVKPATPIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++++E DMILIMTV PGFGGQ I++ +PK+ + + + K + ++VDGG++
Sbjct: 121 PYLEILNEFDMILIMTVEPGFGGQSFIDTMMPKVARTREAVNKSGLDVWVQVDGGISRAT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+ AGAD V GS+ ++ + L +L
Sbjct: 181 IEQAASAGADTFVAGSAVYSSPDTHAEIDALRELA 215
>gi|255930803|ref|XP_002556958.1| Pc12g00550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581577|emb|CAP79682.1| Pc12g00550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 254
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 84/246 (34%), Positives = 128/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+A+F+ LG + S + GA +H D+MDG FVPN++ G V+ +R
Sbjct: 1 MAPPAIIAPSILSANFADLGHDCSKKMEQGADWLHVDIMDGHFVPNMTIGCPVVSQIRGC 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI + AGCD+ FH E++
Sbjct: 61 VDRPSEPCGRGTFDCHMMIMEPHKWVVEFKKAGCDLYCFHYEAAVSSVAATDPTDKETTA 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
++ +R IH G + G+AI P+TPV +L D+I + DM+L+MTV+PGFGGQ+
Sbjct: 121 RTSPKQLIRYIHEQGMQAGIAIKPDTPVDVLWDIIESEDPAERPDMVLVMTVHPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVAALRARC--PDLNIEVDGGLGLGTIDQAADAGANVIVAGSAIFGAQDPGDV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|27380791|ref|NP_772320.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
gi|27353956|dbj|BAC50945.1| ribulose-phosphate 3-epimerase [Bradyrhizobium japonicum USDA 110]
Length = 233
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 109/207 (52%), Positives = 142/207 (68%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFSRLGEE+ + AGA IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 8 RPLAIAPSILASDFSRLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKAMRPHTK 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
VFD HLMIS D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP
Sbjct: 68 KVFDAHLMISPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNPGTP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +LE VID +D++L+M+VNPGFGGQ I S I KIR +A+ R I +EVDGGV
Sbjct: 128 IGVLEYVIDLVDLVLVMSVNPGFGGQAFIPSAIGKIRDIRAMTAGRPIDIEVDGGVGPDV 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISY 209
+L AGA+ V G+S F + +Y
Sbjct: 188 AGALAAAGANAFVAGTSVFRGGTQDAY 214
>gi|160915442|ref|ZP_02077653.1| hypothetical protein EUBDOL_01450 [Eubacterium dolichum DSM 3991]
gi|158432562|gb|EDP10851.1| hypothetical protein EUBDOL_01450 [Eubacterium dolichum DSM 3991]
Length = 220
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 5/208 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ DF+R+ E++ + AK +HFDVMDG FVPN++FG D+++ +
Sbjct: 1 MKELVIAPSILSLDFARVEEQLKELNSRHAKWLHFDVMDGHFVPNLTFGPDILKGFKKAV 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR---RSLRTIHAMGKKTGVAIN 118
D V D H+M+S ++ A AG DIITFH E+ I R R I ++G K GV++
Sbjct: 61 DMVMDVHIMVSDPVFFADVFAKAGADIITFHLEAVEDIDACIRLCRHIRSLGVKVGVSVK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDG 176
P+T +L + E+DM+L+M+V PGFGGQ +E+ + K+R + I + +++DG
Sbjct: 121 PKTSPEVLLPYLQEMDMVLVMSVEPGFGGQSFMEAMLDKVRLLRKEIDAKGYATRIQIDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQK 204
G+ K V+AG D+LV GS F
Sbjct: 181 GINEETGKLAVEAGCDVLVAGSYVFKGD 208
>gi|317014966|gb|ADU82402.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Gambia94/24]
Length = 217
Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 125/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G ++ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVILENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I +G GV +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLKPQIISIHAENEKHPHRVLQLIKNLGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|218961872|ref|YP_001741647.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Cloacamonas
acidaminovorans]
gi|167730529|emb|CAO81441.1| D-ribulose-5-phosphate 3-epimerase [Candidatus Cloacamonas
acidaminovorans]
Length = 217
Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 91/220 (41%), Positives = 135/220 (61%), Gaps = 5/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
QI PS+LAADF L EI+++ AGA +H D+MDG +VPN+SFG VIR++R S
Sbjct: 1 MQKTQIAPSLLAADFGNLDSEITSLEAAGADILHLDIMDGHYVPNLSFGFPVIRTIRFLS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+++ D HI+++ D ++FH E+ H R ++T+ G K G+A+NP T
Sbjct: 61 KLPLDVHLMVTNPDFHISLLLDMDVQWVSFHQETFYHSHRLIQTLKEKGIKAGLALNPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ LE ++ ++D IL+M+VNPGF Q I S I KI L K + +EVDGGVT
Sbjct: 121 PIGTLEALLPDLDYILVMSVNPGFSAQDFIPSAIYKIWDLYNLRKKNNYRYLIEVDGGVT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ N K+L +AG D+LV S F+ Y++ ++ L+ +
Sbjct: 181 AANAKALKEAGTDILVSASYIFSSHD---YSQAISALRNA 217
>gi|323359996|ref|YP_004226392.1| pentose-5-phosphate-3-epimerase [Microbacterium testaceum StLB037]
gi|323276367|dbj|BAJ76512.1| pentose-5-phosphate-3-epimerase [Microbacterium testaceum StLB037]
Length = 223
Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 83/221 (37%), Positives = 122/221 (55%), Gaps = 7/221 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + +I PSILAADF + E++ I AGA +H DVMD FVPN++FG ++ ++ S
Sbjct: 3 TDAPRINPSILAADFVNMEAELARI--AGADFVHVDVMDNHFVPNLTFGPQMVGRIQETS 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI D A+ G +TFH E++ R + ++G + GVA+ P T
Sbjct: 61 PVPLDVHLMIDDPDRWAPAYAELGAASVTFHLEAAASPIALARQLRSLGARAGVAVKPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
PV L + ++E D IL+MTV PGFGGQ + T+PK+R +R ++ L+VDGG+
Sbjct: 121 PVENLFEALNEFDQILVMTVEPGFGGQSFMPETMPKLRALADEAKRRGSNVWLQVDGGIG 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGAD V GS+ F + + L+ +A
Sbjct: 181 ESTIAQAAEAGADTFVAGSAVFGADDPD---RAIESLRAAA 218
>gi|221119546|ref|XP_002161732.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 236
Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 127/215 (59%), Gaps = 3/215 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SY 60
+P ++ PSIL D S+L E + ++GA +H DVMDG FVPNI+FGA V++ LR
Sbjct: 7 SPRCKVGPSILNTDLSQLATECERLIESGADYLHLDVMDGHFVPNITFGAPVVKCLRTQI 66
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + FD H+M++ IN + DAG D TFH E++ +RTI G K G+A+ P+
Sbjct: 67 TKTFFDMHMMVADPKKWINDMQDAGADQYTFHIEATDQPANVIRTIRETGMKVGIAVKPK 126
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + ++ I ++DM+LIMTV PGFGGQ+ + + +PK+ + I +EVDGGV
Sbjct: 127 TDIEVILPYIKDVDMVLIMTVEPGFGGQKFMANMMPKVELVREAFPF--IDIEVDGGVGP 184
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI+ + +AGA+++V G + + + D
Sbjct: 185 SNIEIVAKAGANMIVSGVAIVKSESPKQVISEIRD 219
>gi|195172776|ref|XP_002027172.1| GL20105 [Drosophila persimilis]
gi|194112985|gb|EDW35028.1| GL20105 [Drosophila persimilis]
Length = 221
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 127/222 (57%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M+ +I PSIL AD + L E + GA +H DVMDG FVPN++FG +++SLR
Sbjct: 1 MSVKAKIGPSILNADLANLAAESKKLLDNGADYLHLDVMDGNFVPNLTFGHPMVKSLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I+ +ADAG ++ TFH E + + R I G + G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWISPMADAGVNLYTFHIEPVDDVYKVSRLIQEAGMQVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T VA LE I D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTKVADLEKYISIADVVLVMTVEPGFGGQSFMADMMPKVEWLRQ--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I+ ++GA+++V G++ + K + D+ +S L
Sbjct: 179 PKTIECCAKSGANMIVSGTAVVGATDQRQVIKDMRDVVQSYL 220
>gi|329946678|ref|ZP_08294090.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328526489|gb|EGF53502.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 229
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 85/222 (38%), Positives = 132/222 (59%), Gaps = 9/222 (4%)
Query: 7 IVPSILAADFSRLGEEISNIT----KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSIL D + L +E+ +T GA IH DVMD FVPN+S+G V+ ++ +++
Sbjct: 4 IHPSILNCDIAHLADELDRVTGDDGARGADGIHVDVMDNHFVPNLSWGLPVVEAVLAHTA 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D A+AGC ++T H E++ R R +H +G G+A+ P TP
Sbjct: 64 LPVDAHLMICDADRWAPAYAEAGCQVVTPHAEATTAPVRLARELHRLGAGAGIALRPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ + DV+ E D++L+MTV PGFGGQ IE +PKIR+A+ L+G + L +VDGG+T
Sbjct: 124 LEAVADVLGEFDLLLLMTVEPGFGGQSFIEPMLPKIRRARELVGNGGLDLRVQVDGGITP 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I+ +AGAD+ V GS+ + +++L+++A +
Sbjct: 184 QTIERAAEAGADVFVAGSAVYRADD---ALAAISELRQAAFS 222
>gi|326773325|ref|ZP_08232608.1| ribulose-phosphate 3-epimerase [Actinomyces viscosus C505]
gi|326636555|gb|EGE37458.1| ribulose-phosphate 3-epimerase [Actinomyces viscosus C505]
Length = 226
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 89/217 (41%), Positives = 134/217 (61%), Gaps = 6/217 (2%)
Query: 7 IVPSILAADFSRLGEEISNIT-KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL D + L +E+ +T AGA +H DVMD FVPN+S+G V+ ++ ++S
Sbjct: 4 IHPSILNCDIAHLADELDRVTGDAGADGLHVDVMDNHFVPNLSWGLPVVEAVLAHSSLPV 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D A+AGC I+T H E++ R R +H +G G+A+ P TP+
Sbjct: 64 DAHLMIRDADRWAPAYAEAGCQIVTPHAEATTAPVRLARELHRLGAGAGIALRPATPLEA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
+ DV+ E D++L+MTV PGFGGQ IES +PKIR+A+ L+G R + L +VDGG+T++ I
Sbjct: 124 VADVLGEFDLLLLMTVEPGFGGQTFIESMLPKIRRARELVGARGLDLRVQVDGGITAQTI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+ V GS+ + + +L+++A
Sbjct: 184 ERAAEAGADVFVAGSAVYRADD---ALAAICELREAA 217
>gi|282882095|ref|ZP_06290736.1| ribulose-phosphate 3-epimerase [Peptoniphilus lacrimalis 315-B]
gi|281298125|gb|EFA90580.1| ribulose-phosphate 3-epimerase [Peptoniphilus lacrimalis 315-B]
Length = 214
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF+ + E+ + + IH D+MDG +VPNISFG +++ LR+ +D F
Sbjct: 1 MLAPSILSADFTNIREDFKIMNEEKCDFIHVDIMDGNYVPNISFGPGIVKQLRTLTDIKF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +++I A +G DIIT HP ++ H+ R+L I + G K G+A+NP +
Sbjct: 61 DTHLMIENPENYIKDFAQSGSDIITIHPSTTKHLDRTLNLIKSYGMKCGIALNPSDDLTC 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ ++ ++ ++LIM+VNPGFGGQ IE+++ KI+ + +I S +EVDGGV N
Sbjct: 121 LKYILKDLYLVLIMSVNPGFGGQSFIENSLLKIKDLRNIIKNNSYDTLIEVDGGVKIDNA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++ AGAD+LV GS F + K+ +L
Sbjct: 181 QKILDAGADILVSGSGVFKG-DIRNNIKKFKEL 212
>gi|194755605|ref|XP_001960074.1| GF11711 [Drosophila ananassae]
gi|190621372|gb|EDV36896.1| GF11711 [Drosophila ananassae]
Length = 221
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 127/222 (57%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M +I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR
Sbjct: 1 MPVKAKIGPSILNADLSNLACESQKLLDNGADYLHLDVMDGNFVPNLTFGHPMVKSLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I +ADAG ++ T+H E + + R + G K G+AI P
Sbjct: 61 IKTAFFEAHMMVQNPEQWIEPMADAGVNLYTYHVEPVEDVAKVSRQVQDAGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V +E ID +D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTEVKDIEKYIDMVDVVLVMTVEPGFGGQSFMADMMPKVEWLRE--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I+ ++GA+++V G++ + ++L D+ +S L
Sbjct: 179 PKTIECCAKSGANMIVSGTAVVGAPDQGQVIRQLRDVVQSYL 220
>gi|220912434|ref|YP_002487743.1| ribulose-phosphate 3-epimerase [Arthrobacter chlorophenolicus A6]
gi|219859312|gb|ACL39654.1| Ribulose-phosphate 3-epimerase [Arthrobacter chlorophenolicus A6]
Length = 226
Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 127/217 (58%), Gaps = 5/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSIL+ADF L E+ I + A +H DVMD FVPN++ G V++ +++
Sbjct: 1 MTQCC-INPSILSADFVNLEAELKRI--SNADAVHVDVMDNHFVPNLTIGLPVVQRIQAV 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI+ D ADAG +TFH E+S + R + G K G+A+ P
Sbjct: 58 SPVPLDAHLMIADADRWAPGFADAGLASVTFHAEASIAPIKLARELRNRGAKAGMALRPS 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
TPV D++ E+DM+LIMTV PGFGGQ ++ T+PKIR+A+A I I +++VDGG+
Sbjct: 118 TPVEPYLDMMSELDMLLIMTVEPGFGGQAFLDVTLPKIRRARAAIDGSGIGVAIQVDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
T I +AGA++ V GS+ + + + RL +
Sbjct: 178 TEETITRAAEAGANVFVAGSAVYGAEDPGAAIDRLRE 214
>gi|237755421|ref|ZP_04584047.1| ribulose-phosphate 3-epimerase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692421|gb|EEP61403.1| ribulose-phosphate 3-epimerase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 221
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 88/201 (43%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFS LG++I + +AGA IH D+MDG +VPNI+FG V+ S+R +D FD
Sbjct: 4 LAPSILSADFSILGQQIKEVEEAGADIIHLDIMDGRYVPNITFGPPVVESIRKITDLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I AG ++I+FH +++ H R + I + K GV +NP TPV L
Sbjct: 64 AHLMIVEPEKYITDFIKAGVNMISFHMDATIHAHRVVDMIKSNDVKAGVVLNPATPVKTL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRNI 183
E++I ID +LIM+VNPGFGGQ+ I T K+++ K L+ K + I +E+DGGV NI
Sbjct: 124 EEIIHYIDYVLIMSVNPGFGGQKFIPQTAEKVKKLKLLMEKANRTDILIEIDGGVNQDNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
L G ++ V G++ F
Sbjct: 184 NYLSMLGVNIFVAGNAVFKGN 204
>gi|310825643|ref|YP_003958000.1| ribulose-phosphate 3-epimerase [Eubacterium limosum KIST612]
gi|308737377|gb|ADO35037.1| ribulose-phosphate 3-epimerase [Eubacterium limosum KIST612]
Length = 229
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L+ADF+ L ++ ++ GA +H DVMDG FVPNI+ G D ++ LR F
Sbjct: 14 KISPSMLSADFANLDRDLKSVEAGGADWLHVDVMDGHFVPNITIGPDQVKCLRKTIGLPF 73
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMIS +I ADAG DIIT H E + + I G K + I+P+TP+ +
Sbjct: 74 DVHLMISEPLKYIERFADAGADIITVHVEVEDDTQECIDLIKKSGCKASLVISPDTPIDV 133
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L ID+I MIL+M V PGFGGQ+ I T +++ +A+IG R + LE+DGGV + +
Sbjct: 134 LAPFIDDISMILVMGVYPGFGGQKYIPETTERLKGIRAMIGGRDVDLEIDGGVNFETLST 193
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+V+AGA+++V GS F+ + ++ +K
Sbjct: 194 VVEAGANVIVSGSCLFSG----DMKENISHFRK 222
>gi|322378998|ref|ZP_08053401.1| ribulose-phosphate 3-epimerase [Helicobacter suis HS1]
gi|321148490|gb|EFX42987.1| ribulose-phosphate 3-epimerase [Helicobacter suis HS1]
Length = 228
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 130/216 (60%), Gaps = 5/216 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++I SIL+ADF L + I+ + G +H DVMDG FVPN++FG V+++L Y +
Sbjct: 18 PMEIAASILSADFMDLKQSITRV--HGVDLLHVDVMDGHFVPNLTFGPCVLKNLDQYFNI 75
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + I++ + +T H ES PHI +++ I ++G K G+++NP TP+
Sbjct: 76 PLDIHLMVDNPLFCIDLYSSLRPRYVTIHLESIPHIHKTIHYIKSLGFKAGISLNPATPL 135
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
LE ++D++D++L M+VNPGFGGQ+ + + KI K + +EVDGG+ + N
Sbjct: 136 CGLEYILDDLDLVLFMSVNPGFGGQKFLPLILKKITHFKQRFPHYTGKIEVDGGINADNA 195
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
K L GA +LVVGS F+ + A L +L+KS
Sbjct: 196 KDLWACGAHVLVVGSYLFSHENP---ALALKELRKS 228
>gi|269837713|ref|YP_003319941.1| ribulose-phosphate 3-epimerase [Sphaerobacter thermophilus DSM
20745]
gi|269786976|gb|ACZ39119.1| ribulose-phosphate 3-epimerase [Sphaerobacter thermophilus DSM
20745]
Length = 229
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 139/219 (63%), Gaps = 4/219 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PS+L AD RL + ++ I AGA +H DVMDG FVPNI+ G V+ ++ +
Sbjct: 9 RRVAIAPSVLTADLVRLADAVAAIEAAGADYVHLDVMDGRFVPNITIGIPVVEAVADVTH 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + +++ AG I+T H E+S H+ R+++ I G + GVA+NP TP
Sbjct: 69 LPVDVHLMIVEPERYVDQFIAAGAQIVTVHVEASVHLHRTVQRIREAGAQAGVALNPATP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+A +E+++ +D++L+M+VNPGFGGQ I +++ KI + + +I +R ++VDGG+ +
Sbjct: 129 LAAIEEILPFVDLVLVMSVNPGFGGQTFIPTSLGKIERLRRMIDERGARAVIQVDGGIKA 188
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI+ +V AGAD++V GS+ F E S A+ + L+++
Sbjct: 189 SNIRRVVDAGADIIVAGSAVF--TPERSVAEAMALLREA 225
>gi|302335705|ref|YP_003800912.1| ribulose-5-phosphate 3-epimerase [Olsenella uli DSM 7084]
gi|301319545|gb|ADK68032.1| ribulose-5-phosphate 3-epimerase [Olsenella uli DSM 7084]
Length = 228
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 136/210 (64%), Gaps = 4/210 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+RLGEE+ +I+ A +H+DVMDG FVPN+SFG V+ +++ + D
Sbjct: 10 IAPSVLSADFTRLGEELDSISD--ADYVHYDVMDGHFVPNLSFGTAVLSQVKAATSLPID 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+++ + +AG D ++FH E+ H R + IH G + GVA+NP TPV++L
Sbjct: 68 VHLMVANPEECARWYLEAGADAVSFHWEAQTHAARLVSLIHDAGARAGVALNPATPVSVL 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E +IDE+D++LIM+VNPGFGGQ+ +E TI K+R +AL + +EVDGG+ + N
Sbjct: 128 EAIIDELDLVLIMSVNPGFGGQRFLEGTIGKLRTLRALCTSHGVRPLVEVDGGIGASNAG 187
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGA+LLV GSS F + ++
Sbjct: 188 VVCAAGANLLVAGSSIFGTTDRAAAIAKIR 217
>gi|71892339|ref|YP_278073.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|71796445|gb|AAZ41196.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 221
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 140/219 (63%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+A+F++LGE+++N+ AGA +HFDVMD +VPN+S G+ V+RSLRSY
Sbjct: 1 MKRFLIAPSILSANFAKLGEDVTNVVSAGADILHFDVMDNHYVPNLSVGSMVLRSLRSYG 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM ID I+ A G + I+FHPE++ HI RSL+ I G K G+ NP
Sbjct: 61 VSIPIDVHLMAKPIDRLISDFAAVGANYISFHPEATEHIDRSLQLIKEYGCKAGLVFNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
T + LE V+D+ID+I++M+VNPGF GQ I + KIRQ + LI +I L VDGG+
Sbjct: 121 TTLNYLEYVMDKIDLIVLMSVNPGFSGQLFIPMILNKIRQTRKLIDNTNYNIDLAVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+NI S+++AGA ++GS+ F + Y + +++ +
Sbjct: 181 NIKNIHSILKAGATTFIIGSAIFGSEN---YYEVIHNFR 216
>gi|294786943|ref|ZP_06752197.1| ribulose-phosphate 3-epimerase [Parascardovia denticolens F0305]
gi|315226580|ref|ZP_07868368.1| ribulose-phosphate 3-epimerase [Parascardovia denticolens DSM
10105]
gi|294485776|gb|EFG33410.1| ribulose-phosphate 3-epimerase [Parascardovia denticolens F0305]
gi|315120712|gb|EFT83844.1| ribulose-phosphate 3-epimerase [Parascardovia denticolens DSM
10105]
Length = 224
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 121/219 (55%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PSIL+ADF L E+ I A +H DVMD FVPN++ G +++ + S
Sbjct: 5 TIKIAPSILSADFVNLQSELEAIKT--ADLVHVDVMDHHFVPNLTMGEPIVKRICEVSPI 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A G +TFH ++ R R +H MG K A+ P PV
Sbjct: 63 PVDAHLMIEDPDRWAPEFARCGARSVTFHMGAAHAPVRLARQLHDMGAKACFAVRPAEPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D++DE DMILIMTV PGFGGQ+ + + + K+R+ + I +R + S++VDGGV+
Sbjct: 123 ESIFDILDEFDMILIMTVEPGFGGQKFLSNQMGKVRRLRDEITRRGLSTSIQVDGGVSPT 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+LV GS+ + K + ++A
Sbjct: 183 TAPIVAEAGADVLVAGSAVYGVKNPADAIAAIRQKAEAA 221
>gi|299473285|emb|CBN77685.1| ribulose-phosphate 3-epimerase [Ectocarpus siliculosus]
Length = 285
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 87/218 (39%), Positives = 133/218 (61%), Gaps = 6/218 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PS+LAAD SRL EE ++ + GA IH DVMDG FVPN++FGA VI+ LR ++
Sbjct: 33 SRPAAIGPSVLAADMSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHT 92
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ D HLM+S ++ +A AG D TFH E++ + + + A G GVA+ P T
Sbjct: 93 KALLDAHLMVSHPAQWVDDMAAAGVDRFTFHVEATDKVAELIAAVKAKGMGVGVALKPAT 152
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV + D++D++LIMTV PGFGGQ + + K+++ + + +EVDGG+ +
Sbjct: 153 PVEEVFPYCDDLDLVLIMTVEPGFGGQSFMADQMSKVKELRRRY--PGLDIEVDGGLADK 210
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ +AGA+L+V GS F + A+R+N LK++
Sbjct: 211 TIEEAARAGANLIVCGSYIFKG----NKAERINLLKQA 244
>gi|308177751|ref|YP_003917157.1| ribulose-phosphate 3-epimerase [Arthrobacter arilaitensis Re117]
gi|307745214|emb|CBT76186.1| ribulose-phosphate 3-epimerase [Arthrobacter arilaitensis Re117]
Length = 220
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 85/218 (38%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P+ +I PSIL+ADF+ L E+ I A +H DVMD FVPN++ G V+ +L S
Sbjct: 1 MPNARINPSILSADFANLAAELERI--HTADAVHVDVMDNHFVPNLTLGLPVVDALHKVS 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + D A G D +TFH E+S R R + + G K +A+ P T
Sbjct: 59 KLPIDVHLMIENADRWAPEYAQLGVDSVTFHAEASAAPIRLARELRSAGSKASMALRPAT 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
P+ D+I E+DM+L+MTV PGFGGQ+ ++ +PKI++A+A I + I+L+VDGG++
Sbjct: 119 PIEPYLDMIGELDMVLLMTVEPGFGGQKFLDLVLPKIKRARAAIEGSGKPIALQVDGGIS 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I +AGAD+ V GS+ ++ + L +L
Sbjct: 179 RDTILRAAEAGADVFVAGSAVYSAQEPSVEIDVLRNLA 216
>gi|307638213|gb|ADN80663.1| Ribulose-phosphate 3-epimerase [Helicobacter pylori 908]
gi|325996806|gb|ADZ52211.1| Ribulose-phosphate 3-epimerase [Helicobacter pylori 2018]
gi|325998399|gb|ADZ50607.1| Ribulose-phosphate 3-epimerase [Helicobacter pylori 2017]
Length = 217
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + + II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVELFSPLKPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|317182754|dbj|BAJ60538.1| ribulose-phosphate 3-epimerase [Helicobacter pylori F57]
Length = 217
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTKMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNAGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|261840223|gb|ACX99988.1| ribulose-phosphate 3-epimerase [Helicobacter pylori 52]
Length = 217
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNAGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLRVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L QAG D++V GS F K + L ++++
Sbjct: 179 VFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|256544913|ref|ZP_05472284.1| ribulose-phosphate 3-epimerase [Anaerococcus vaginalis ATCC 51170]
gi|256399412|gb|EEU13018.1| ribulose-phosphate 3-epimerase [Anaerococcus vaginalis ATCC 51170]
Length = 220
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 84/219 (38%), Positives = 137/219 (62%), Gaps = 8/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+A+FS L +++ + K+ K +H DVMDG FVPNISFG +I+++R +D V
Sbjct: 2 VEIAPSLLSANFSNLQKDLDELKKSNIKYLHIDVMDGKFVPNISFGFPIIKAIRKDNDFV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I G DI+T H E+ ++ ++ I + G K G++ P+T +
Sbjct: 62 FDTHLMIEEPIRYIENFKKCGSDIVTIHYEACSNLDETIEKIKSFGMKVGLSFKPKTDIN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +++ID+ LIM+V PGFGGQ +E ++ KI++ +ALI ++++S +EVDGG+ N
Sbjct: 122 KIIPYLEKIDLCLIMSVEPGFGGQSFMEDSLEKIKKIRALIDEKNLSCLIEVDGGIKDFN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGE------ISYAKRLND 215
+K ++ AG DL+V GS F+ Y K +N+
Sbjct: 182 LKKVIDAGVDLVVSGSDIFSNNENSISRQVEKYKKIINE 220
>gi|308183651|ref|YP_003927778.1| ribulose-phosphate 3-epimerase [Helicobacter pylori PeCan4]
gi|308065836|gb|ADO07728.1| ribulose-phosphate 3-epimerase [Helicobacter pylori PeCan4]
Length = 217
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|299755353|ref|XP_001828610.2| ribulose-phosphate 3-epimerase [Coprinopsis cinerea okayama7#130]
gi|298411187|gb|EAU93213.2| ribulose-phosphate 3-epimerase [Coprinopsis cinerea okayama7#130]
Length = 242
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 82/216 (37%), Positives = 126/216 (58%), Gaps = 4/216 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-Y 60
P I PS+LA+DF +L E + K GA+ +H DVMDG FVPNI+ GA ++ +R
Sbjct: 1 MPRAIISPSVLASDFGQLTAECKRMIKGGAEWLHMDVMDGHFVPNITMGAPILSCVRKGI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D DCH+M++ + ++ IADAG + FH E++ + IH K GVAI+P+
Sbjct: 61 PDIFMDCHMMVAQPERWVDDIADAGGAMYCFHIEATSDPIALIHQIHKRNMKAGVAISPD 120
Query: 121 TPVAILEDVIDEI-DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP + D I ++ DM+L+MTV PG GGQ+ IE +PK+ + +A + +EVDGGV
Sbjct: 121 TPSTAITDEIGQLADMLLVMTVYPGRGGQKFIERCVPKVSELRARFPDK--DIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ I +AG++++V G++ F + K L +
Sbjct: 179 PKTIDVCAEAGSNVIVAGTAIFGADDPPAVIKSLKE 214
>gi|317178252|dbj|BAJ56041.1| ribulose-phosphate 3-epimerase [Helicobacter pylori F16]
gi|332674337|gb|AEE71154.1| ribulose-phosphate 3-epimerase [Helicobacter pylori 83]
Length = 217
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTKMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI S LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKCYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|260893694|ref|YP_003239791.1| ribulose-phosphate 3-epimerase [Ammonifex degensii KC4]
gi|260865835|gb|ACX52941.1| ribulose-phosphate 3-epimerase [Ammonifex degensii KC4]
Length = 230
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 89/223 (39%), Positives = 135/223 (60%), Gaps = 5/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++++ PS+LAADF RL EE++ + AGA +H D+MDG FVPNI+FG V+ +LR +S
Sbjct: 2 TVKVAPSLLAADFGRLREEVARVEAAGADLLHLDIMDGHFVPNITFGPQVVAALRPHSRL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI + + AG D+IT H E+ H+ R L + G GVA+NP TP
Sbjct: 62 PFDVHLMIEQPERYAEDFLAAGADLITVHVEAVVHLHRLLTRLKERGVMVGVALNPSTPA 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
++E+V+ +D++L+MTVNPGFGGQ+ I +PKI +I + +EVDGG+ +
Sbjct: 122 VMVEEVLPLVDVVLVMTVNPGFGGQKFIPEVVPKIAHLTRMIAAKESRALIEVDGGIDAT 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+V+AGA +LV G+S F + + LK++ ++
Sbjct: 182 TAPLVVEAGAQILVAGTSVFKAD---KVEEAIRMLKEAGKGVE 221
>gi|319937492|ref|ZP_08011897.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. 29_1]
gi|319807332|gb|EFW03941.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. 29_1]
Length = 214
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 119/213 (55%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+A+F+ L +++ I GA IH+DVMDG FVPNISFG +++ + +D
Sbjct: 2 VKVAPSVLSANFAELKKDLDMIKACGADWIHYDVMDGHFVPNISFGYSILKDISKVTDMY 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAINPET 121
D HLMIS +++ AG +ITFH E+ + R ++ I G G++I P T
Sbjct: 62 LDVHLMISHPMKYVDEFIKAGASLITFHVEAMANETSTRELIQHIQNQGIHVGLSIKPTT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V +E +D++D++L+M+V PGFGGQ I KIR+ +L R +EVDGG+ +
Sbjct: 122 QVDEIEKYLDDVDLVLVMSVEPGFGGQSFQHQAIDKIRKLHSLKNGRHFIIEVDGGINAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+AG D+LV GS F L
Sbjct: 182 TGLLCKEAGVDVLVAGSYVFQADNCQKAIDSLK 214
>gi|325963043|ref|YP_004240949.1| ribulose-5-phosphate 3-epimerase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469130|gb|ADX72815.1| ribulose-5-phosphate 3-epimerase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 226
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 126/217 (58%), Gaps = 5/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I PSIL+ADF L E+ I+ A +H DVMD FVPN++ G V++ +++
Sbjct: 1 MTQCC-INPSILSADFVNLEAELQRISS--ADAVHVDVMDNHFVPNLTLGLPVVQRIQAV 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLMI+ D ADAG +TFH E+S + R + + G K G+A+ P
Sbjct: 58 SPVPLDAHLMIADADRWAPGFADAGLASVTFHAEASIAPVKLARELRSRGAKAGMALRPA 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV D++ E+DM+LIMTV PGFGGQ ++ T+PKIR+A+A I + L+VDGG+
Sbjct: 118 TPVEPYVDMLSELDMLLIMTVEPGFGGQAFLDITLPKIRRARAAIDGSGMDVALQVDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
T I +AGA++ V GS+ + + RL +
Sbjct: 178 TEETIVRAAEAGANVFVAGSAVYGADDPAAAIGRLRE 214
>gi|256090553|ref|XP_002581251.1| ribulose-phosphate 3-epimerase [Schistosoma mansoni]
gi|238667109|emb|CAZ37490.1| ribulose-phosphate 3-epimerase [Schistosoma mansoni]
Length = 231
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 4/216 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+ I I PSIL AD S+L + ++ +GA +H DVMDG FVPNI+ G V+ SL+ +
Sbjct: 6 SKPILIGPSILNADLSKLADVCDHLLNSGADYLHLDVMDGHFVPNITIGHPVVASLKKHL 65
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
S + D H+M+S + + + AG TFH ES+ ++ + I K G+ I P
Sbjct: 66 PSKAFLDLHMMVSDPEKWVENMKAAGASQYTFHLESTENVMHCIHKIREADMKVGLGIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV L ID +DMILIMTV PGFGGQ+ + +PK++ + G ++ +EVDGGVT
Sbjct: 126 KTPVTELLPYIDSVDMILIMTVEPGFGGQKFMADMLPKVKYLRERYG--NLDIEVDGGVT 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+N++ V+AGA+++V G+ + + + K +
Sbjct: 184 LKNVRDCVEAGANMIVSGTEITSHENPANIIKLMRS 219
>gi|299143979|ref|ZP_07037059.1| ribulose-phosphate 3-epimerase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518464|gb|EFI42203.1| ribulose-phosphate 3-epimerase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 215
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 87/215 (40%), Positives = 131/215 (60%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ DF+ + ++ + +A A +H D+MDG +VPNISFG ++ R +D F
Sbjct: 1 MISPSILSCDFTNVKKDFDAMNEAKADFVHIDIMDGNYVPNISFGPSIVSQFRKLTDIDF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ + +I AG +IIT HP+S+ H+ R++ I + G K G+AINP ++I
Sbjct: 61 DVHLMINEPEKYIEDFVKAGANIITIHPDSTLHLNRTINLIKSFGIKAGIAINPAQELSI 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
L+ +++ID++LIM+VNPGFGGQ IES+ K+ K +I K +EVDGG+ N
Sbjct: 121 LDYTLEDIDLVLIMSVNPGFGGQSFIESSTRKVEDVKKIINNAKSKCLIEVDGGIKLNNA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ AGAD+LV GS+ F + + +L K
Sbjct: 181 LKVYNAGADILVAGSAIFGSENPKKTIIKFKELLK 215
>gi|125810190|ref|XP_001361393.1| GA15886 [Drosophila pseudoobscura pseudoobscura]
gi|54636568|gb|EAL25971.1| GA15886 [Drosophila pseudoobscura pseudoobscura]
Length = 221
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 128/222 (57%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M+ +I PSIL AD + LG E + GA +H DVMDG FVPN++FG +++SLR
Sbjct: 1 MSVKAKIGPSILNADLANLGAESKKLLDNGADYLHLDVMDGNFVPNLTFGHPMVKSLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I+ +ADAG ++ TFH E + + R + G + G+AI P
Sbjct: 61 IKTAFFETHMMVQNPEQWISPMADAGVNLYTFHIEPVDDVYKVSRLVQEAGMQVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T VA LE I D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTKVADLEKYISIADVVLVMTVEPGFGGQSFMADMMPKVEWLRQ--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I+ ++GA+++V G++ + K + D+ +S L
Sbjct: 179 PKTIECCAKSGANMIVSGTAVVGATDQRQVIKDMRDVVQSYL 220
>gi|258546066|ref|ZP_05706300.1| ribulose-phosphate 3-epimerase [Cardiobacterium hominis ATCC 15826]
gi|258518665|gb|EEV87524.1| ribulose-phosphate 3-epimerase [Cardiobacterium hominis ATCC 15826]
Length = 226
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 106/217 (48%), Positives = 146/217 (67%), Gaps = 4/217 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+++ + AGA IHFDVMD FVPN+SFGA + ++LR Y +
Sbjct: 8 IAPSILSADFARLGEDVAAVLAAGADVIHFDVMDNHFVPNLSFGAPICQALRDYGISAPI 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM S +D+ I A AG D ++FHPE+S HI RSL+ I + G K G+ NP TP+A
Sbjct: 68 DVHLMASPVDALIEQFAQAGADYVSFHPEASIHIDRSLQLIKSHGMKAGLVFNPATPLAC 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
L+ V+D+ID+ILIM+VNPGFGGQ + S + K+R A+ +I R I LEVDGGV + NI
Sbjct: 128 LDYVLDKIDLILIMSVNPGFGGQAFLPSALDKLRAARRIIDASGRDIRLEVDGGVKTDNI 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKS 219
++ AGAD+ V GS+ FN + + ++ K+
Sbjct: 188 AAIAAAGADMFVAGSAIFNAPDYAAVINTMRGEIAKA 224
>gi|326484032|gb|EGE08042.1| ribulose-phosphate 3-epimerase [Trichophyton equinum CBS 127.97]
Length = 252
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/246 (34%), Positives = 129/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + DAGCD+ FH E++
Sbjct: 61 VQRPTCAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVKSTAAKEPSDNTTTE 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH +G + G+AI PET V +L D++ + DM+L+MTVNPGFGGQ+
Sbjct: 121 KTSPKELIRYIHELGMQAGIAIKPETSVDVLWDILENKEAIERPDMVLVMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVQALRA--KYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAQNPAEV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|189204051|ref|XP_001938361.1| ribulose-phosphate 3-epimerase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985460|gb|EDU50948.1| ribulose-phosphate 3-epimerase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 252
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 87/245 (35%), Positives = 129/245 (52%), Gaps = 32/245 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF LG+ S+ GA +H D+MDG FVPN++FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFGALGKACSDTISQGADWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VDRPTTAHGKGTFDCHMMIAEPKRWVRDFKKAGCDLYCFHYEAAVSSTAADSPSAKSDKQ 120
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQL 150
+ +R IHA G + G+AI P T V +L D+++ DM+L+MTV PGFGGQ
Sbjct: 121 TSPQDLIRFIHAEGMQAGIAIKPSTSVDVLWDILENPNKEEVPDMVLVMTVEPGFGGQSF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ S +PK+ + + + +EVDGG+ + I AGA+++V GS+ F
Sbjct: 181 MASELPKVTALRQKYPE--LHIEVDGGLGEKTIDQAADAGANVIVAGSAVFGASDPGHVI 238
Query: 211 KRLND 215
K+L +
Sbjct: 239 KKLRE 243
>gi|188528323|ref|YP_001911010.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Shi470]
gi|188144563|gb|ACD48980.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Shi470]
Length = 217
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGIMPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|327305539|ref|XP_003237461.1| ribulose-phosphate 3-epimerase [Trichophyton rubrum CBS 118892]
gi|326460459|gb|EGD85912.1| ribulose-phosphate 3-epimerase [Trichophyton rubrum CBS 118892]
Length = 252
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 85/246 (34%), Positives = 130/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + DAGCD+ FH E++
Sbjct: 61 VQRPTCAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVESTAAKEPSDNTTTE 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ + +R IH +G + G+AI PET V +L +++ + DM+L+MTVNPGFGGQ+
Sbjct: 121 KTNPKELIRYIHELGMQAGIAIKPETSVDVLWNILENKETIERPDMVLVMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVQALRA--KYPDMNIEVDGGLGIGTIDQAADAGANVIVAGSAVFGAQNPAEV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|118784828|ref|XP_313959.3| AGAP005080-PA [Anopheles gambiae str. PEST]
gi|116128231|gb|EAA09374.3| AGAP005080-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 83/224 (37%), Positives = 126/224 (56%), Gaps = 5/224 (2%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR- 58
M P S +I PSIL AD S+L EE + GA +H DVMDG FVPN++FG V++ LR
Sbjct: 1 MAPLSARIGPSILNADLSQLHEESEKLLANGADYLHLDVMDGTFVPNLTFGHPVVKCLRN 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAI 117
D+ F+ H+M+ + I +ADAG TFH E + R + G K G+A+
Sbjct: 61 KIKDAFFETHMMVQNPQQWIEPMADAGVQQYTFHIEPVLDSVADVCRKVRESGMKVGLAL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P T V ++ ID DM+L+MTV PGFGGQ+ + +PK++ + ++ +EVDGG
Sbjct: 121 KPGTAVEAVQQYIDSADMVLVMTVEPGFGGQKFMGDMMPKVQWLREHY--PALDIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
V I+ +AGA+++V G++ + + + L +SA+
Sbjct: 179 VGPATIEQCSKAGANMIVAGTAIIRADDQAAVIRDLRSAVQSAI 222
>gi|83674978|gb|ABC40669.1| rcRPE [Hylobates lar]
Length = 228
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 116/217 (53%), Gaps = 4/217 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DV+DG F PNI+FG V+ S R
Sbjct: 1 MVSGCKIGPSILNSDLANLGAEYLQMLDSGADYLHLDVIDGHFDPNITFGHPVVESPRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAIAGANQYTFHLETTENPGTLIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFG Q+ +E + K+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGRQKFMEDMMQKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AG +++V GS+ + S L +
Sbjct: 179 GLDTVYKCAEAGVNMIVSGSAIMRSEDPRSVINLLRN 215
>gi|149234662|ref|XP_001523210.1| ribulose-phosphate 3-epimerase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452999|gb|EDK47255.1| ribulose-phosphate 3-epimerase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 230
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 117/217 (53%), Gaps = 9/217 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-- 62
I PSILA++F+ LG + G +H DVMDG FVPNISFG VI SLR
Sbjct: 5 IISPSILASNFADLGCSCKRVVDTGDVDWLHLDVMDGHFVPNISFGPPVIESLRKQFPRD 64
Query: 63 ----SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
VFDCH+M+S + I IA AG D TFH E++ + I G K + I
Sbjct: 65 SNKPIVFDCHMMVSDPEEWIEAIAKAGGDSYTFHYEATKDPASVIAKIKKHGLKAAMGIK 124
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P TP+ ++ D++DM+L+MTV PGFGGQ+ + +PK+ + +++EVDGG+
Sbjct: 125 PNTPIDVVYPFADDLDMVLVMTVEPGFGGQKFMADMMPKVETLRQ--KYPHLNIEVDGGL 182
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA+++V G+S F + + L
Sbjct: 183 GKDTVKPAAVAGANVIVAGTSVFKAENPKEVTQFLKK 219
>gi|261838820|gb|ACX98586.1| d-ribulose-5-phosphate 3 epimerase [Helicobacter pylori 51]
Length = 217
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 123/216 (56%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|332982329|ref|YP_004463770.1| ribulose-5-phosphate 3-epimerase [Mahella australiensis 50-1 BON]
gi|332700007|gb|AEE96948.1| ribulose-5-phosphate 3-epimerase [Mahella australiensis 50-1 BON]
Length = 224
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 140/217 (64%), Gaps = 4/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PS++ ADF RL +EI + KAG +H DVMDG FVPN + G D+ RS+R +D
Sbjct: 2 KAKISPSMMCADFGRLEDEIRILEKAGVDYLHIDVMDGHFVPNFAIGPDLTRSIRRLTDI 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +++I++ DI++ H E++ H+ R+L+ I A G KTGVA+NP TP
Sbjct: 62 PLDIHLMVERPENYIDLFEPRLGDIVSVHQEATVHLERTLQIIKAAGAKTGVAVNPATPA 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+++ VIDE D++L+MTVNPGF GQ+L+ ST+ KIR+ K +I + S +EVDG V+
Sbjct: 122 IMIKPVIDEADVVLVMTVNPGFAGQKLVPSTLSKIREVKEMIQESCASAEIEVDGNVSFE 181
Query: 182 NIKSLVQAGADLLVVG-SSFFNQK-GEISYAKRLNDL 216
N ++ AGAD+ V G SS FN ++ A +L +
Sbjct: 182 NAFKMLAAGADIFVAGTSSIFNADMDKLEAAYKLKQI 218
>gi|218295267|ref|ZP_03496103.1| Ribulose-phosphate 3-epimerase [Thermus aquaticus Y51MC23]
gi|218244470|gb|EED10995.1| Ribulose-phosphate 3-epimerase [Thermus aquaticus Y51MC23]
Length = 222
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ PSIL AD SRL E I AG IH DVMDG FVPN++FG ++ ++R +
Sbjct: 1 MRFAPSILTADLSRLKEVIGEAEAAGVDWIHLDVMDGVFVPNLTFGPILVEAVRRVTRLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + + ++ A AG D+IT H E++PH R+++ + +GKK G+AINP TP+A
Sbjct: 61 LDVHLMIVNPERYLEDFARAGADVITVHFEATPHAHRAVQKVKELGKKAGLAINPATPLA 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
E ++ E+D+ L+M+VNPGFGGQ+ I + ++R+ KA+ + +EVDGGV
Sbjct: 121 AFEALLPELDLALLMSVNPGFGGQKYIPQSTERLRRLKAMRDALNPACLIEVDGGVNQTT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + AGAD+ VVGS+ FN K K L ++ K
Sbjct: 181 VGEVYLAGADVAVVGSALFNDKPVRENLKALKEVLK 216
>gi|196000364|ref|XP_002110050.1| hypothetical protein TRIADDRAFT_21066 [Trichoplax adhaerens]
gi|190588174|gb|EDV28216.1| hypothetical protein TRIADDRAFT_21066 [Trichoplax adhaerens]
Length = 227
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 126/218 (57%), Gaps = 2/218 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S I PSIL +D S L E + + GA +H DVMDG FVPN++FG V+ LRS +S
Sbjct: 7 SAMIGPSILNSDLSVLANEAKKLVECGADYLHLDVMDGHFVPNLTFGHPVVECLRSKVES 66
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H+M+++ + + +ADAG TFH E++ + + +I G K G+AI P+TPV
Sbjct: 67 FFDVHMMVANPEKWVKPMADAGVQQYTFHIEATDNPLELIDSIKKTGMKVGIAIKPKTPV 126
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ ID +MIL+MTV PGFGGQ+ + + K+ ++ +++++ VDGGV+ NI
Sbjct: 127 ETILPYIDHANMILVMTVEPGFGGQKFMSDMMSKVAFLRSKF--KTLNIGVDGGVSPSNI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+AGA+++V GS+ + L + + +
Sbjct: 185 DQSAKAGANMIVSGSAIIKSQDPRGVISTLKSVVEQYM 222
>gi|302525887|ref|ZP_07278229.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
gi|302434782|gb|EFL06598.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
Length = 227
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 6/220 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAG---AKQIHFDVMDGCFVPNISFGADVIRSL 57
M + I PSIL+ADF++LGEEI+ + G A +H DVMD FVPN++ G V++SL
Sbjct: 1 MASPL-IAPSILSADFAKLGEEIAAVAHPGETRADWVHVDVMDAHFVPNLTLGLPVVQSL 59
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+D DCHLMI D A+AG +T H E++ + + A G K G++I
Sbjct: 60 LKSTDLPLDCHLMIDDPDRWAIGYAEAGAYNVTVHVEAAKDPVMLAKNLRAAGAKAGLSI 119
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVD 175
P TP+ + + D +L+M+V PGFGGQ I + K+R A+ L+ + L E+D
Sbjct: 120 KPGTPLEPHLETLKHYDTLLVMSVEPGFGGQSFIADVLEKVRTARRLVDTGHLKLVVEID 179
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ S I+ +AG D V GS+ + + L +
Sbjct: 180 GGINSDTIEQAAEAGVDCFVAGSAVYGAEDPGRAVAALRE 219
>gi|239917586|ref|YP_002957144.1| ribulose-5-phosphate 3-epimerase [Micrococcus luteus NCTC 2665]
gi|281413927|ref|ZP_06245669.1| ribulose-5-phosphate 3-epimerase [Micrococcus luteus NCTC 2665]
gi|239838793|gb|ACS30590.1| ribulose-5-phosphate 3-epimerase [Micrococcus luteus NCTC 2665]
Length = 223
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 85/221 (38%), Positives = 126/221 (57%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++ PSIL+ADF+RL +E++ I A +H DVMD FVPN++ G V+ ++R +
Sbjct: 3 ARPPRLHPSILSADFARLADELARIPS--ADAVHVDVMDNHFVPNLTLGLPVVEAIRRAT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI D A+AG + +TFH E+S R R + A G K G+A+ P T
Sbjct: 61 DLPLDLHLMIEDADRWAPGYAEAGAESVTFHAEASAAPVRLARELRAAGAKAGMALRPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
V D++ E+DM+L+MTV PGFGGQ ++ +PKIR+A+ + ++L+VDGGV
Sbjct: 121 AVEPYLDMLPELDMLLLMTVEPGFGGQAFLDVVLPKIRRARHALDGGPAPLALQVDGGVN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD+ V GS+ F + + L A
Sbjct: 181 RETIERAAEAGADVFVAGSAVFGAEDPDAALVGLRTAAARA 221
>gi|237808723|ref|YP_002893163.1| ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
gi|237500984|gb|ACQ93577.1| ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
Length = 219
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 91/220 (41%), Positives = 135/220 (61%), Gaps = 5/220 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS++ ADF++L EEI + AGA H DVMDG FVPN + G + I+++ +
Sbjct: 2 INICPSMMCADFTKLREEIIALEAAGADLFHIDVMDGHFVPNFAMGFEDIKAIAKLATIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM++ D +I A II H E+ H+ R++ I GK GVAINP TP+
Sbjct: 62 FDLHLMVNEPDQYIERFAATDAKIIYVHVEACTHLHRTIMKIKQAGKLAGVAINPGTPLT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+L+++I++ID +LIM+V+PGF GQ I S+I K+R+ K++I K ++ ++VDG + N
Sbjct: 122 VLDEIINDIDYVLIMSVDPGFAGQSFITSSIDKVRRLKSMITKYSPNVKIKVDGSINKDN 181
Query: 183 IKSLVQAGADLLVVGSS-FFNQKGEISYAKRLNDLKKSAL 221
+ L AGA+ VVG++ F YAK +N LK S +
Sbjct: 182 VPLLYAAGAEYFVVGTAGVFR--DGFDYAKNINILKNSTI 219
>gi|121607581|ref|YP_995388.1| ribulose-phosphate 3-epimerase [Verminephrobacter eiseniae EF01-2]
gi|121552221|gb|ABM56370.1| ribulose-5-phosphate 3-epimerase [Verminephrobacter eiseniae
EF01-2]
Length = 226
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 140/222 (63%), Gaps = 8/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I PSILAADF+RLGEE+ + AGA IHFDVMD +VPN++ G V ++L+ +
Sbjct: 1 MSRKFRITPSILAADFARLGEELRAVIAAGADWIHFDVMDNHYVPNLTVGPMVCQALKPH 60
Query: 61 SDS------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+ + D HLM++ +D+ ADAG D I+FHP++SPH+ RS++ I A G +TG
Sbjct: 61 AQTASGAAVPIDVHLMVAPVDALAAAFADAGADGISFHPDASPHVHRSIQAIRAKGIETG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
+ NP P+ +L+ VID+ID+ILIM VNPGFGGQ I+S + KI A+ I + I L
Sbjct: 121 LVFNPAEPLDVLDWVIDDIDLILIMGVNPGFGGQGFIDSALRKIEAARKRIAASGKDIRL 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+VDGG+ NI+ + AGAD V GS+ F Q L
Sbjct: 181 QVDGGIKPDNIRRVADAGADTFVAGSAIFGQPDYRQAIAALR 222
>gi|289741201|gb|ADD19348.1| d-ribulose-5-phosphate 3-epimerase [Glossina morsitans morsitans]
Length = 228
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 121/221 (54%), Gaps = 5/221 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RS 59
M +I PSIL AD S L E + GA +H DVMDG FVPN++FG +++ L R
Sbjct: 1 MPLVAKIGPSILNADLSDLASESQRLLDNGADYLHLDVMDGHFVPNLTFGHSLVKCLRRK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAI 117
D+ F+ H+M+++ I +ADAG ++ TFH E I R I G K G+A+
Sbjct: 61 IKDTPFETHMMVTNPQQWIQNMADAGVNLYTFHVEPVCQSDIPEICRLIQEAGMKVGLAV 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P T V ++ ID D++L+MTV PGFGGQ + +PK++ + ++++EVDGG
Sbjct: 121 KPGTRVETVQQYIDLADVVLVMTVEPGFGGQAFMRDMMPKVQWLREHY--PNLNIEVDGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V I+ +AGA+++V G++ + L + +
Sbjct: 179 VGPETIEYCAKAGANMIVSGTALIEANNQKEVINLLRSMVQ 219
>gi|182416253|ref|YP_001821319.1| ribulose-phosphate 3-epimerase [Opitutus terrae PB90-1]
gi|177843467|gb|ACB77719.1| Ribulose-phosphate 3-epimerase [Opitutus terrae PB90-1]
Length = 230
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 89/221 (40%), Positives = 131/221 (59%), Gaps = 7/221 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADFSRL EE+ + ++GA +H D+MDG FVPNISFG V++++R+++ FD
Sbjct: 6 VAPSLLAADFSRLREEVQRVEQSGADWLHLDIMDGHFVPNISFGPAVVKAVRAHTRLPFD 65
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS---LRTIHAMGKKTGVAINPETPV 123
LMI + +I AG D IT H E+ R LR I G K G+A+NPETP+
Sbjct: 66 VQLMIGNPAEYIGAFVQAGADRITVHVETDGGSDRVRQLLREIRERGCKAGLALNPETPL 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI--RQAKALIGKRSISLEVDGGVTSR 181
+E + EID++L+MTV+PGFGGQ I T+ K+ + +E+DGG+T
Sbjct: 126 EQVEPFLAEIDLLLVMTVHPGFGGQSFIPETVEKMEAAYVRRAACGLRFRIEIDGGITPE 185
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL--KKSA 220
+ + AGAD+LV G+ F + + L DL +++A
Sbjct: 186 TAAAGLLAGADVLVAGTWLFQSRDMAVAIRELRDLAGREAA 226
>gi|308185321|ref|YP_003929454.1| ribulose-phosphate 3-epimerase [Helicobacter pylori SJM180]
gi|308061241|gb|ADO03137.1| ribulose-phosphate 3-epimerase [Helicobacter pylori SJM180]
Length = 217
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLKPQIISIHAENEKHPHRVLQLIKNAGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIESLQNVRQ 214
>gi|296805692|ref|XP_002843670.1| ribulose-phosphate 3-epimerase [Arthroderma otae CBS 113480]
gi|238844972|gb|EEQ34634.1| ribulose-phosphate 3-epimerase [Arthroderma otae CBS 113480]
Length = 251
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 86/245 (35%), Positives = 132/245 (53%), Gaps = 32/245 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + K + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMKDNSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESSPH-------------- 98
+ FDCH+MI+ + DAGCD+ FH E++ +
Sbjct: 61 VERPATAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVNSTAAKEPSGTSTEQ 120
Query: 99 --IRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQL 150
+ +R IH +G + G+AI PET V +L +++ + DM+L+MTVNPGFGGQ+
Sbjct: 121 TSPKELIRYIHELGMQAGIAIKPETSVDVLWNILESKEEAERPDMVLVMTVNPGFGGQKF 180
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 MASELPKVKALRA--KYPDMNIEVDGGLGIGTIDQAADAGANVIVAGSAVFGAQDPGEVI 238
Query: 211 KRLND 215
+L +
Sbjct: 239 AKLRE 243
>gi|313837730|gb|EFS75444.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL037PA2]
gi|314927388|gb|EFS91219.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL044PA1]
gi|314972669|gb|EFT16766.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL037PA3]
gi|328907471|gb|EGG27237.1| ribulose-phosphate 3-epimerase [Propionibacterium sp. P08]
Length = 223
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR SD
Sbjct: 2 TVRITPSILNANLANLAGEVGRIPS--ADGLHIDVMDGHFVPNLVMGAPFVESLRPASDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMI D +AG +TFH E++ + R + +MG + VA+ P TP+
Sbjct: 60 MFDVHLMIEDPDRWAPQYVEAGAQSVTFHLEATTAPIKLARELRSMGARASVALRPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI + ++DGGV++
Sbjct: 120 EQLADILTEFDQILLMTVEPGFGGQEFLDPVLSKIRKARKLIDAAGADIWLQIDGGVSAE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AGAD V GS+ + L + +A A
Sbjct: 180 TIERAAEAGADTFVAGSAVYRSDDPNQVVTSLRNQASAAQA 220
>gi|268680227|ref|YP_003304658.1| ribulose-phosphate 3-epimerase [Sulfurospirillum deleyianum DSM
6946]
gi|268618258|gb|ACZ12623.1| ribulose-phosphate 3-epimerase [Sulfurospirillum deleyianum DSM
6946]
Length = 213
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 127/215 (59%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ DF R+ EEI+ I +AG +H DVMDG FVPN++ G V+ ++ +
Sbjct: 1 MLVAPSILSCDFGRINEEITAICEAGCDLVHVDVMDGHFVPNLTIGPVVVNAVAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A ++FH E H R ++ I G + +NP TP +
Sbjct: 61 LDIHLMVENNTFFVDLFAPLKPKYLSFHIEEEKHPHRLIQKIRDYGISPAIVLNPHTPPS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ ++DM+L+M+VNPGFGGQ+ I S + K K +I KR+ +EVDGGV ++N
Sbjct: 121 SIEYLLADLDMVLLMSVNPGFGGQKFIPSVLEKASLLKEMIEKRNTKTLIEVDGGVNNQN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I++L AG D++V G+ F+ Y ++ L+
Sbjct: 181 IQALAHAGVDIVVAGNYVFSASD---YTCAIDSLR 212
>gi|320160926|ref|YP_004174150.1| ribulose-phosphate 3-epimerase [Anaerolinea thermophila UNI-1]
gi|319994779|dbj|BAJ63550.1| ribulose-phosphate 3-epimerase [Anaerolinea thermophila UNI-1]
Length = 224
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 129/218 (59%), Gaps = 4/218 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S ++ S+L+ADF L +++ + +AG +IH DVMDG FVPN++ G ++ +L+ +
Sbjct: 3 SFRLCASVLSADFRCLEDQVKQLEEAGVDEIHVDVMDGHFVPNLTMGPFIVSTLKRITHL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + D I A+AG ++ E+ PHI R+L+ IH++G + GV +NP TP
Sbjct: 63 PLDVHLMVENPDRMIPWYAEAGAHRLSVQVETCPHIHRTLQNIHSLGCEAGVVLNPGTPA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ LE+V+ D+IL+MTVNPGF GQ + +PKI + + L+ ++VDGG+ +
Sbjct: 123 SWLEEVVSHADLILVMTVNPGFSGQSFLPEVLPKIAKVRDLVENSHSRAVIQVDGGIDQK 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + AGA +V ++ F I +N L++S
Sbjct: 183 TLPLVYAAGARYIVSATAIFKHPEGIKAG--VNALRES 218
>gi|317010078|gb|ADU80658.1| ribulose-phosphate 3-epimerase [Helicobacter pylori India7]
Length = 217
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|255994458|ref|ZP_05427593.1| ribulose-phosphate 3-epimerase [Eubacterium saphenum ATCC 49989]
gi|255993171|gb|EEU03260.1| ribulose-phosphate 3-epimerase [Eubacterium saphenum ATCC 49989]
Length = 221
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSILA+DF+ L EI I + GA IH D+MDG FVPNIS+G D++R + +D
Sbjct: 1 MLLAPSILASDFTDLKSEIKKIEEGGADLIHMDIMDGHFVPNISYGPDIVRQISEITDMP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + +I + I H E+S H+ R + I + G + GVAINP TPV
Sbjct: 61 FDVHLMIENPERYIEKFITKNTEYICVHEEASVHLNRLIDQIKSAGARAGVAINPSTPVV 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L++V+ ++DM+L+M VNPGFGGQ+ ++ + KI+ + + VDGGVT N
Sbjct: 121 MLDEVLRDVDMVLVMAVNPGFGGQKFLDLSYNKIKALDEKRKHMDLGFKIAVDGGVTLDN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ L +G+D+ V+G+ F + ++ + +
Sbjct: 181 AEKLAASGSDIFVMGTYIFKAEDVRAHTEHVKK 213
>gi|15639930|ref|NP_219381.1| ribulose-phosphate 3-epimerase (cfxE) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189026168|ref|YP_001933940.1| ribulose-phosphate 3-epimerase [Treponema pallidum subsp. pallidum
SS14]
gi|6647759|sp|O66107|RPE_TREPA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|2988419|gb|AAC08057.1| pentose-5-phosphate 3-epimerase homolog [Treponema pallidum]
gi|3323267|gb|AAC65902.1| ribulose-phosphate 3-epimerase (cfxE) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018743|gb|ACD71361.1| ribulose-phosphate 3-epimerase [Treponema pallidum subsp. pallidum
SS14]
gi|291060300|gb|ADD73035.1| ribulose-phosphate 3-epimerase [Treponema pallidum subsp. pallidum
str. Chicago]
Length = 218
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 87/205 (42%), Positives = 124/205 (60%), Gaps = 2/205 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S + PS+L+ADFS L + + GA+ +H DVMDG FVPN++FGA V+R LRS
Sbjct: 1 MERSFTLAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSK 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLM+S I AG D +TFH E+ H R + I G K G+++ P
Sbjct: 61 THLPFDVHLMVSRPADLIEDFVQAGADFLTFHIEAEVHAHRLIHAIRGRGVKVGISLVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPVA L +V+ +D++L+MTVNPGF GQQ+I + K+ + +R S + VDGG+
Sbjct: 121 TPVAALSEVLPFVDLVLVMTVNPGFSGQQMIAHCLSKVSALVQMRTERGYSYMISVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQ 203
R + + AGAD++V GS+FF+
Sbjct: 181 DCRTLPQALDAGADVIVSGSAFFSG 205
>gi|217977382|ref|YP_002361529.1| Ribulose-phosphate 3-epimerase [Methylocella silvestris BL2]
gi|217502758|gb|ACK50167.1| Ribulose-phosphate 3-epimerase [Methylocella silvestris BL2]
Length = 227
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 2/209 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF++LGEE+ IT+AGA IH DVMDG FVPNI+ G ++ +LR +
Sbjct: 1 MNPLV-IAPSILSADFAKLGEEVRAITEAGADWIHVDVMDGHFVPNITIGPAIVAALRPH 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLMI+ D ++ A AG D+I H E+ PH+ RSL+ I A+GKK GV +NP
Sbjct: 60 THLPFDVHLMIAPCDPYLEAFAQAGADLIAVHVEAGPHLHRSLQAIRALGKKAGVVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+P + ++ V+D +D++L+M+VNPGFGGQ I S + KI + KA+IG R I +EVDGGV
Sbjct: 120 SPASSVKHVLDLLDLVLVMSVNPGFGGQAFIPSAVEKIAELKAMIGDRPIRIEVDGGVNP 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ AGAD LV GS+ F G Y
Sbjct: 180 ETAALVAAAGADTLVAGSAVFKG-GPGQY 207
>gi|54296690|ref|YP_123059.1| ribulose-phosphate 3-epimerase [Legionella pneumophila str. Paris]
gi|53750475|emb|CAH11869.1| ribulose-phosphate 3-epimerase [Legionella pneumophila str. Paris]
Length = 217
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSYSD 62
+ QI+PS+L+AD +RLGEE+ + KAGA IHFDVMD +VPN++FG + ++ + +
Sbjct: 2 TFQILPSLLSADMTRLGEEVDAVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIKKFPN 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + +D+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP T
Sbjct: 62 LPIDVHLMTTPVDTLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L + +L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +N
Sbjct: 122 IDTLTWCAHNLKFVLVMTVNPGFGGQKLIPEVIPKLSKIRQQY--PNLDLCVDGGVTPQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I SL AGA+ V GS+ FN KR+ +
Sbjct: 180 IASLAHAGANQFVAGSAIFNSSNYSETIKRMRE 212
>gi|146339841|ref|YP_001204889.1| ribulose-phosphate 3-epimerase [Bradyrhizobium sp. ORS278]
gi|146192647|emb|CAL76652.1| Ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase)
(PPE) (R5P3E) [Bradyrhizobium sp. ORS278]
Length = 233
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 104/207 (50%), Positives = 142/207 (68%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DF++LGEE+ + AGA IH DVMDG FVPNIS+G DVI++LR ++
Sbjct: 8 RPLVIAPSILASDFAKLGEEVRAVDAAGADWIHLDVMDGHFVPNISYGPDVIKALRPHTT 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV++NP TP
Sbjct: 68 KIFDAHLMITPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSLNPSTP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ ++E V+D +D++LIM+VNPGFGGQ I S I K++ +A+ R I +EVDGGV N
Sbjct: 128 LNVIEYVLDLVDLVLIMSVNPGFGGQAFIASAIGKVQDLRAMTAGRPIDIEVDGGVGRDN 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISY 209
+L AGA+ V GS+ F +Y
Sbjct: 188 AGALAAAGANAFVAGSAVFKGGTMEAY 214
>gi|241895663|ref|ZP_04782959.1| ribulose-phosphate 3-epimerase [Weissella paramesenteroides ATCC
33313]
gi|241871030|gb|EER74781.1| ribulose-phosphate 3-epimerase [Weissella paramesenteroides ATCC
33313]
Length = 219
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 127/214 (59%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSILAAD+ L ++S + AGA+ +H DVMDG FVP I++G + +++LR S
Sbjct: 2 TIKVAPSILAADYLNLARDVSVVENAGAELLHIDVMDGSFVPAIAYGPNWVKALRKVSKM 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM + +I+ A AG DII H E++ HI R+L+ I A G K V INP T V
Sbjct: 62 TLDVHLMAVDPERYIDEFAAAGADIIGVHYEATNHIHRALQQIKAHGIKAEVVINPGTAV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+++E V+ +D +L+MTVNPGFGGQQ + I KI L ++ +E+DGG +
Sbjct: 122 SVIEPVLYMVDQVLVMTVNPGFGGQQFLPEMIEKIAILDKLKREKGYTFDIEIDGGANDQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K AGA + V GS F++ + +L +
Sbjct: 182 TTKMAYDAGATVAVAGSYVFDKVDPAAKIAKLKE 215
>gi|225618952|ref|YP_002720178.1| ribulose-phosphate 3-epimerase [Brachyspira hyodysenteriae WA1]
gi|225213771|gb|ACN82505.1| ribulose-phosphate 3-epimerase [Brachyspira hyodysenteriae WA1]
Length = 233
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 132/213 (61%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I SIL A FS L I + +AG+ +H DVMDG FVP I+FGA VI ++ S
Sbjct: 17 MSKINIATSILTASFSNLEATIKELEEAGSDYLHLDVMDGVFVPQITFGAKVISDIKKIS 76
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI + + HI+ A AGCDI++ H E + HI R + I A K G+ +NP T
Sbjct: 77 SIPLDAHLMIVNPEKHIDDFAKAGCDIVSVHFEGNIHIHRLIYQIKAHNIKAGIVLNPHT 136
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V ++E +ID+ID +L+M+VNPGFGGQ+ IES++ KI++AK LIG R I L VDGGV
Sbjct: 137 RVDVIEPIIDDIDYLLLMSVNPGFGGQKFIESSVSKIKEAKKLIGNRDIILAVDGGVNLN 196
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
S+V+AGA+ LV GS+ + + +L
Sbjct: 197 TCNSVVEAGANFLVAGSAIIDSNNKKDTINKLR 229
>gi|32266845|ref|NP_860877.1| ribulose-phosphate 3-epimerase [Helicobacter hepaticus ATCC 51449]
gi|32262897|gb|AAP77943.1| ribulose-phosphase 3-epimerase [Helicobacter hepaticus ATCC 51449]
Length = 216
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 81/219 (36%), Positives = 129/219 (58%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I + PS+L+ADF++LG+E+ +I KAG +H DVMDG FVPN++ G +++S+
Sbjct: 1 MNKDILVAPSMLSADFAKLGQEVEDICKAGCDFVHIDVMDGHFVPNLTMGPMIVQSIAKS 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S D HLM+ ++ +++ ++ H E H+ R + I G K GV +NP
Sbjct: 61 SSKPLDIHLMVKNVPFFVDLFLPLKPAFMSVHIEEVQHLHRLIWYIKESGVKAGVVLNPH 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
T LE ++ +ID++L+M+VNPGFGGQ I ++ K++ K + + S LE+DGGV
Sbjct: 121 TNEQSLEYILPDIDLVLLMSVNPGFGGQSFIPHSVKKLQNLKKMRDRLNPSCLLEIDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +NI L AG D++V GS F YA+ ++ L+
Sbjct: 181 SDKNIDILKNAGIDIVVAGSFIFGSTD---YAQAISALR 216
>gi|315103586|gb|EFT75562.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL050PA2]
Length = 223
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 84/218 (38%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPS--ADGLHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWAPQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AGAD V GS+ + L + +A
Sbjct: 181 IERAAEAGADTFVAGSAVYRSGNPDHVVASLRNRASAA 218
>gi|322699171|gb|EFY90935.1| ribulose-phosphate 3-epimerase [Metarhizium acridum CQMa 102]
Length = 276
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 89/269 (33%), Positives = 130/269 (48%), Gaps = 56/269 (20%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF++LGEE + GA +H D+MDG FVPNI+FGA V+ +R +
Sbjct: 1 MTPPAIIAPSILSADFAQLGEECARTMDQGADWLHVDIMDGHFVPNITFGAAVVAKIRGH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------P 97
D FDCH+MI+ + AGCD+ FH E++
Sbjct: 61 VDKPTECQGRGTFDCHMMIAEPKKWVKEFKKAGCDLYCFHYEAAFSTAAESPEQTSDKKT 120
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID----------------------- 134
+ +R IH G G+AI P+T V +L D+++ D
Sbjct: 121 SPKELIRYIHDNGMLAGIAIKPDTSVDVLWDILETADAKEMPDVSCNPTTMRVHISPGEL 180
Query: 135 --------MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
M+L+MTV PGFGGQ+ + S +PK++ +A + +++EVDGG+ I
Sbjct: 181 VIFLLTRQMVLVMTVYPGFGGQKFMASELPKVQALRAKYPE--LNIEVDGGLGPGTIDQA 238
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
AGA+++V GS+ F K L
Sbjct: 239 ADAGANVIVAGSAVFGAKDPSEVISVLRK 267
>gi|195474426|ref|XP_002089492.1| GE23827 [Drosophila yakuba]
gi|194175593|gb|EDW89204.1| GE23827 [Drosophila yakuba]
Length = 221
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M +I PSIL AD S L E + GA +H DVMDG FVPN++FG +++SLR
Sbjct: 1 MPVQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + I +ADAG ++ TFH E + + R + G K G+AI P
Sbjct: 61 IKTAFFETHMMVQKPEQWIEPMADAGVNLYTFHVEPVQDVVKVCRQVQESGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V LE + D++L+MTV PGFGGQ + +PK++ + ++ +EVDGGV
Sbjct: 121 GTEVQELEKYVSIADVVLVMTVEPGFGGQSFMGDMMPKVKWLRD--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+++V G++ + + + D+ S L
Sbjct: 179 PKTIHCCAEAGANMIVSGTAVVGASDQAQVIREMRDVVHSYL 220
>gi|223984321|ref|ZP_03634463.1| hypothetical protein HOLDEFILI_01757 [Holdemania filiformis DSM
12042]
gi|223963678|gb|EEF68048.1| hypothetical protein HOLDEFILI_01757 [Holdemania filiformis DSM
12042]
Length = 215
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 5/204 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ DFS+L ++ + + A+ +H+DVMDG FVPN++FG D++++ R +D
Sbjct: 3 IISPSILSLDFSQLNSQMDAVNASRAQWLHYDVMDGHFVPNLTFGPDILKAFRKLTDRQL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIR---RSLRTIHAMGKKTGVAINPETP 122
D HLMIS + + A AG ITFH E+ + + + A+G K G++I P+TP
Sbjct: 63 DVHLMISDPRKYAPVFAQAGAQWITFHYEAMNDAQDCRALAKELRALGVKPGISIKPQTP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
V++LE + + D++L+M+V PGFGGQQ S + KI + + +EVDGG+ +
Sbjct: 123 VSVLEALWQDFDLVLVMSVEPGFGGQQFDPSALDKITVLRQWAQAAGADLRIEVDGGINA 182
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
K +AGAD+LV GS F
Sbjct: 183 ETGKLCREAGADVLVAGSYIFKNN 206
>gi|15612504|ref|NP_224157.1| ribulose-phosphate 3-epimerase [Helicobacter pylori J99]
gi|6647760|sp|Q9ZJ75|RPE_HELPJ RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|4156059|gb|AAD07015.1| RIBULOSE-PHOSPHATE 3-EPIMERASE [Helicobacter pylori J99]
Length = 217
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 125/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G ++ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVILENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I + G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLNPQIISIHAENEKHPHRVLQLIKSSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFESKDRKLAIEGLQNVRQ 214
>gi|300814535|ref|ZP_07094791.1| ribulose-phosphate 3-epimerase [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511362|gb|EFK38606.1| ribulose-phosphate 3-epimerase [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 214
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PSIL+ADF+ + E+ + + IH D+MDG +VPNISFG +++ LR+ +D F
Sbjct: 1 MLAPSILSADFTNIREDFKIMNEEKCDFIHVDIMDGNYVPNISFGPGIVKQLRTLTDIKF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +++I A +G DIIT HP ++ H+ R+L I + G K G+A+NP +
Sbjct: 61 DTHLMIENPENYIKDFAQSGSDIITIHPSTTKHLDRTLNLIKSYGLKCGIALNPSDDLTC 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L+ ++ ++ ++LIM+VNPGFGGQ IE+++ KI+ + +I S +EVDGGV N
Sbjct: 121 LKYILKDLYLVLIMSVNPGFGGQSFIENSLLKIKDLRNIIKDNSYDTLIEVDGGVKIDNA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++ AGAD+LV GS F + K+ +L
Sbjct: 181 QKILDAGADILVSGSGVFKG-DIRNNIKKFKEL 212
>gi|269956517|ref|YP_003326306.1| ribulose-phosphate 3-epimerase [Xylanimonas cellulosilytica DSM
15894]
gi|269305198|gb|ACZ30748.1| ribulose-phosphate 3-epimerase [Xylanimonas cellulosilytica DSM
15894]
Length = 220
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L ++ I A H DVMD FVPN++ G V L + S D
Sbjct: 5 INPSILSADFANLERDLHAIKS--ADYAHVDVMDNHFVPNLTLGLPVFDRLAAISPVPLD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AG +TFH E++ R R + +G + GVA+ P TPV
Sbjct: 63 AHLMIDDPDRWAPQFAEAGAASVTFHAEAAQAPVRLARELRRLGARAGVALRPATPVEPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D++ EIDMIL+MTV PGFGGQ I+ T+PKIR+A+ I + + ++VDGGV+ I+
Sbjct: 123 LDLLAEIDMILVMTVEPGFGGQTFIDGTLPKIRRARKAISESGLDVWVQVDGGVSRTTIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGA++ V GS+ + + L L +
Sbjct: 183 RAADAGANVFVAGSAVYGADDIPAEIDALRALADA 217
>gi|282853847|ref|ZP_06263184.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes J139]
gi|282583300|gb|EFB88680.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes J139]
gi|314923540|gb|EFS87371.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL001PA1]
gi|314981511|gb|EFT25605.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL110PA3]
gi|315092175|gb|EFT64151.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL110PA4]
gi|315092892|gb|EFT64868.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL060PA1]
gi|327327409|gb|EGE69185.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL103PA1]
Length = 223
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPS--ADGLHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWAPQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD V GS+ + + L+ ALA
Sbjct: 181 IERAAEAGADTFVAGSAVYRSGNPD---HVVASLRNRALAA 218
>gi|297566483|ref|YP_003685455.1| ribulose-phosphate 3-epimerase [Meiothermus silvanus DSM 9946]
gi|296850932|gb|ADH63947.1| ribulose-phosphate 3-epimerase [Meiothermus silvanus DSM 9946]
Length = 224
Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 90/223 (40%), Positives = 140/223 (62%), Gaps = 8/223 (3%)
Query: 1 MTPS--IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+ + I PS+LAADF+RLGE++ + GA IH DVMDG FVPNIS G V+ ++R
Sbjct: 1 MSRPTPVWIAPSVLAADFTRLGEQVREAQEGGADLIHVDVMDGRFVPNISMGIVVVEAIR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
+ D HLMI + ++ AG +TFH E++PH R+++ I +G K G+A+N
Sbjct: 61 RVAQIPLDVHLMIVEPEKYLADFVQAGATYLTFHAEATPHAHRAVQRIRELGAKPGLALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDG 176
P TP++ LE ++ ++D+ L+MTVNPGFGGQ+ I + ++R+ +AL + + +EVDG
Sbjct: 121 PATPLSFLETLLPDLDLALLMTVNPGFGGQKFIPGSTQRLRELRALRDRLNPACLIEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+T + + + GAD+LV GSS FN I + + L+++
Sbjct: 181 GITPQTVTQVS--GADILVAGSSVFNLHSSIQ--ENIKTLREN 219
>gi|208435413|ref|YP_002267079.1| D-ribulose-5-phosphate 3 epimerase [Helicobacter pylori G27]
gi|208433342|gb|ACI28213.1| D-ribulose-5-phosphate 3 epimerase [Helicobacter pylori G27]
Length = 217
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQISQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|329891091|ref|ZP_08269434.1| ribulose-phosphate 3-epimerase [Brevundimonas diminuta ATCC 11568]
gi|328846392|gb|EGF95956.1| ribulose-phosphate 3-epimerase [Brevundimonas diminuta ATCC 11568]
Length = 227
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 101/216 (46%), Positives = 148/216 (68%), Gaps = 3/216 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILA+DFS+LGEEI + AGA IH DVMDG FVPN++ G DV+++LR ++ FD
Sbjct: 12 ICPSILASDFSKLGEEIRALEAAGADWIHVDVMDGHFVPNLTIGPDVVKALRPHTSLPFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +D+ + AG D+++ HPES PH+ R+L I +G K G+ NP TP+++L
Sbjct: 72 VHLMVAPVDNWLEAFRAAGADVMSVHPESGPHVHRTLGQIRQLGAKAGLVFNPATPLSVL 131
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E+ ++ +D++LIM+VNPGFGGQ+ IE+++ KI +A+A++ + L+VDGGV + N
Sbjct: 132 EEAVELVDLVLIMSVNPGFGGQKFIETSLKKIERARAILDRAGSKAHLQVDGGVVAANAG 191
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ V AGAD LV GS F G +YA + LK +A
Sbjct: 192 ACVAAGADALVAGSFVFKG-GPEAYAANIQALKAAA 226
>gi|310793298|gb|EFQ28759.1| ribulose-phosphate 3 epimerase [Glomerella graminicola M1.001]
Length = 251
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 31/244 (12%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + PSILAADF G + S + GA +H D+MDG FVPNIS+G V+ +R +
Sbjct: 1 MAPKAIVAPSILAADFGNFGHDCSKTIEQGADWLHVDIMDGHFVPNISWGPGVVAKIRGH 60
Query: 61 SDSVF--------DCHLMISSIDSHINIIADAGCDIITFHPESS---------------P 97
+ DCH+M+S + + DAG ++ FH E++
Sbjct: 61 VEKPIEAWGKGTFDCHMMVSEPKKWVKGMKDAGANLYCFHYEAAFSSDSDNPEVQSNGKT 120
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEIDMILIMTVNPGFGGQQLI 151
+ R R IH G GVAI P T V ++ ++ ++ DM+LIMTV PGFGGQ+ +
Sbjct: 121 NPRALTRFIHEQGMLAGVAIKPATSVDVVWELLESEDPLERPDMVLIMTVEPGFGGQKFM 180
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
S +PK++ + + +++EVDGG+T + AGA+++V GS+ F + +
Sbjct: 181 ASQLPKVQALREKYPE--LNIEVDGGLTGSTVHQAADAGANVIVAGSAVFGAQDPAAVIS 238
Query: 212 RLND 215
L +
Sbjct: 239 ILRE 242
>gi|326476062|gb|EGE00072.1| ribulose-phosphate 3-epimerase [Trichophyton tonsurans CBS 112818]
Length = 252
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 85/246 (34%), Positives = 128/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + DAGCD+ FH E++
Sbjct: 61 VQRPTCAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVKSTAAKEPSDNTTTE 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ + IH +G + G+AI PET V +L D++ + DM+L+MTVNPGFGGQ+
Sbjct: 121 KTSPKELIHYIHELGMQAGIAIKPETSVDVLWDILENKEAIERPDMVLVMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVQALRA--KYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAQNPAEV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|322784388|gb|EFZ11359.1| hypothetical protein SINV_07367 [Solenopsis invicta]
Length = 238
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 82/220 (37%), Positives = 122/220 (55%), Gaps = 10/220 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
+ +I PSIL AD + L EE + GA +H DVMDG FVPN++FG +++ LR +
Sbjct: 9 NAKIGPSILNADLAELYEESQQLLNNGADYLHLDVMDGHFVPNLTFGHPIVKCLRNKIKE 68
Query: 63 SVFDCHLMISSIDS-------HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+ F+ H+M+S + I +ADAG D TFH E + R + G K GV
Sbjct: 69 AFFETHMMVSKPEQVKYMQVAWIEPMADAGVDQYTFHVEPVEDVPLVCRKVREAGMKVGV 128
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
A+ P TPV ++ D D DMIL+MTV PGFGGQ+ +ES + K+ + + + +EVD
Sbjct: 129 ALKPGTPVDVVTDYADLADMILVMTVEPGFGGQKFMESMLKKVAWLRENYPE--LDIEVD 186
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV I++ +AGA+++V G++ + L D
Sbjct: 187 GGVGPATIEACAKAGANMIVSGTAIIGSADQAKVITTLRD 226
>gi|108563907|ref|YP_628223.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPAG1]
gi|107837680|gb|ABF85549.1| D-ribulose-5-phosphate 3 epimerase [Helicobacter pylori HPAG1]
Length = 217
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLKPQIISIHAENEKHPHRVLQLIKHSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|321250014|ref|XP_003191657.1| ribulose-phosphate 3-epimerase [Cryptococcus gattii WM276]
gi|317458124|gb|ADV19870.1| Ribulose-phosphate 3-epimerase, putative [Cryptococcus gattii
WM276]
Length = 224
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 73/224 (32%), Positives = 125/224 (55%), Gaps = 5/224 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ +I I PS+LA+D S L E + G +H DVMDG FVPNI+ GA ++ +
Sbjct: 1 MSKAI-ISPSVLASDLSDLSNECRRMMANGCDWLHMDVMDGHFVPNITMGAPILEHVYKN 59
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ DCH+M+S+ + ++ AG + TFH E++ + + +H+ G+AI+P
Sbjct: 60 VPNIFMDCHMMVSNPAQWVPEVSKAGGKLYTFHYEATEEPEKVIELVHSHKMLAGLAISP 119
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
ETP + + D + + D++L+MTV PG GGQ+ + + K+++ + ++ ++VDGGV
Sbjct: 120 ETPASAVTDSLGKAADLLLVMTVRPGRGGQKFMPECLEKVKELRERFPGKN--IQVDGGV 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
S N QAG+++LV G++ F K + + A+A
Sbjct: 178 GSGNACQCAQAGSNVLVAGTAIFGAKDPKQTIQEMRTAVDDAIA 221
>gi|50293203|ref|XP_449013.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701877|sp|Q6FL81|RPE_CANGA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|49528326|emb|CAG61983.1| unnamed protein product [Candida glabrata]
Length = 246
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 79/231 (34%), Positives = 119/231 (51%), Gaps = 19/231 (8%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M I I PSILA+DF+ LG E + +GA+ +H DVMDG FVPNI+ G ++ SLR
Sbjct: 1 MVKPI-IAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRA 59
Query: 60 ---------------YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR 104
+ FDCH+M+ + + A AG D TFH E++ ++
Sbjct: 60 VPRSQEEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYEATKDPLSLVK 119
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
I G K AI P TPV +L ++ +DM L+MTV PGFGGQ+ + +PK+ +
Sbjct: 120 LIKENGIKAACAIKPGTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKVEALRTK 179
Query: 165 IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++++VDGG+ I +AGA+++V G+S F + +
Sbjct: 180 F--PHMNIQVDGGLGKETIGVAAKAGANVIVAGTSVFTASDPHEVISFMKE 228
>gi|269977345|ref|ZP_06184318.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris 28-1]
gi|306818714|ref|ZP_07452436.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris ATCC 35239]
gi|307700970|ref|ZP_07637995.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris FB024-16]
gi|269934648|gb|EEZ91209.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris 28-1]
gi|304648400|gb|EFM45703.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris ATCC 35239]
gi|307613965|gb|EFN93209.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris FB024-16]
Length = 218
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 131/222 (59%), Gaps = 8/222 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PS+L D ++++ I A +H D+MD FVPN+++G +++ +
Sbjct: 2 KIKIYPSVLNCDQMHFADQLNAIDS--ADGVHLDIMDNHFVPNLTWGLPTAQAVVKSTTL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D A AGC I++FH E++ R+ I +G K G+A+NP TPV
Sbjct: 60 PVDAHLMIDNPDRWAPEYAKAGCSIVSFHFEAAKAPLRTAEAIRELGAKPGIALNPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++L D++ D +L+M+V PGFGGQ I PKI++ + +I + + +EVDGG++ +
Sbjct: 120 SVLADILPRFDQVLLMSVEPGFGGQGFIPEVYPKIKRLRKMIEEARLSTDIEVDGGISDK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI +V+AGA+++V GS F ++ A+ + L++ A+ +
Sbjct: 180 NIAKVVEAGANVIVAGSFVFKREP----ARAIAKLREIAVGV 217
>gi|154485078|ref|ZP_02027526.1| hypothetical protein EUBVEN_02801 [Eubacterium ventriosum ATCC
27560]
gi|149734031|gb|EDM50150.1| hypothetical protein EUBVEN_02801 [Eubacterium ventriosum ATCC
27560]
Length = 220
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 132/217 (60%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+ADF+ LG +I I +AG IH D+MDG FVPNISFG V ++ R+Y+
Sbjct: 2 IKLAPSILSADFANLGNDIKRIDQAGCDWIHVDIMDGMFVPNISFGMPVTKAARAYTKKY 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI ++ G D++T H E+ ++ ++ IHA G G+A NPETPV
Sbjct: 62 FDVHLMIQEPIRYVKEFKAVGADMLTVHVEACEDVQATIDAIHAEGMDAGLACNPETPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ID+++MILIMTV+PGFGGQ I+ KI A++ + ++ +EVDGG+ N
Sbjct: 122 DIVPFIDKVEMILIMTVHPGFGGQSYIDECTEKIEIVNAIVHEYNLKTLIEVDGGIKVDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + AGA+++V GS+ F + + + + K+
Sbjct: 182 VCIPLDAGANVIVAGSAVFGG----NVEENVKNFKEQ 214
>gi|193671697|ref|XP_001950531.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Acyrthosiphon
pisum]
Length = 227
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 124/215 (57%), Gaps = 3/215 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SY 60
T S +I PS+L AD S+L E + +GA +H DVMDG FVPN++FG V++ LR
Sbjct: 4 TLSCKIGPSVLNADLSQLYNESQKLIDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRTKL 63
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++VF+ H+M+ + I+ +ADA D TFH E + R I G K G+AI P
Sbjct: 64 PNAVFETHMMVQNPLQWISAMADANVDQYTFHIEPCDDVPLVCRKIKEAGMKVGLAIKPG 123
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +E+ ID DMIL+MTV PGFGGQ+ + +PKI + ++ +EVDGG+
Sbjct: 124 TPVTCVEEYIDMADMILVMTVEPGFGGQKFMTDMMPKIEILRE--KYPTMDIEVDGGIGP 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI +AGA+++V G++ K + L D
Sbjct: 182 NNIDVCAKAGANMIVSGTAVIQAKNPPQVIQLLKD 216
>gi|6091725|gb|AAF03437.1|AC010797_13 putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
Length = 233
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 75/229 (32%), Positives = 126/229 (55%), Gaps = 14/229 (6%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMD--------GCFVPNISFGADVIR 55
S +I PS+L++DF+ L E + + GA +H D+M G FVPN++ GA VI
Sbjct: 3 SPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMVPTFYSLLWGHFVPNLTIGAPVIE 62
Query: 56 SLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTG 114
SLR ++++ DCHLM+++ ++ +A AG TFH E + + ++ + I + G + G
Sbjct: 63 SLRKHTNAYLDCHLMVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPG 122
Query: 115 VAINPETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
VA+ P TPV + +++ ++M+L+MTV PGFGGQ+ + + K+R + ++
Sbjct: 123 VALKPGTPVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALRQ--KYPTLD 180
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++VDGG+ I + AGA+ +V GSS F L + A
Sbjct: 181 IQVDGGLGPSTIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTSVEKA 229
>gi|15668861|ref|NP_247664.1| pentose-5-phosphate-3-epimerase [Methanocaldococcus jannaschii DSM
2661]
gi|2833527|sp|Q58093|RPE_METJA RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|1591395|gb|AAB98675.1| pentose-5-phosphate-3-epimerase [Methanocaldococcus jannaschii DSM
2661]
Length = 234
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 123/222 (55%), Gaps = 4/222 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I SIL+ADF L EEI +AG H D+MDG FVPNIS G + + ++ ++
Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+ ++D +N + D ITFH E+ R + I ++G K VA+NP TP+
Sbjct: 62 VEVHLMVENVDLFVNEFEE--MDYITFHIEAVKFPFRIINRIKSIGAKPIVALNPATPLD 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ ++ +L+MTV PGF GQ+ I KIR+ K++I + + VDGG+
Sbjct: 120 AIEYILGDVYAVLVMTVEPGFSGQKFIPVMTKKIRKLKSMIVENGYDTKIFVDGGINVET 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V+AGAD+LV S+ F + + K L + AL D
Sbjct: 180 APLAVKAGADVLVAASAIFGKDDVKTAVKNLREAALEALNKD 221
>gi|90423125|ref|YP_531495.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris BisB18]
gi|90105139|gb|ABD87176.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris
BisB18]
Length = 231
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 106/218 (48%), Positives = 145/218 (66%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PSILA+DFS+LGEE+ + +AG IH DVMDG FVPNIS+G DVI+++R ++
Sbjct: 6 RPLVIAPSILASDFSKLGEEVRAVDQAGCDWIHLDVMDGHFVPNISYGPDVIKAMRPHTK 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GV+INP T
Sbjct: 66 KIFDAHLMIAPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVSINPGTS 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +E V+D +D++L+M+VNPGFGGQ I S + KIR +A+ R I +EVDGGVTS
Sbjct: 126 LGAIEYVLDLVDLVLVMSVNPGFGGQAFIPSALNKIRDLRAMTAGRPIDIEVDGGVTSAV 185
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L AGA+ V GS+ F SY + ++ +A
Sbjct: 186 SGELAAAGANAFVAGSAVFKGGTLESYKANIEGIRNAA 223
>gi|195028967|ref|XP_001987346.1| GH20024 [Drosophila grimshawi]
gi|193903346|gb|EDW02213.1| GH20024 [Drosophila grimshawi]
Length = 221
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 124/222 (55%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M+ +I PSIL AD + L EE + GA +H DVMDG FVPN++FG +++ LR
Sbjct: 1 MSIQAKIGPSILNADLANLAEESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKCLRNK 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ F+ H+M+ + + I ++DAG ++ TFH E + + R I G K G+AI P
Sbjct: 61 IKEAFFETHMMVQNPEQWIAPMSDAGVNLYTFHIEPVEDVCKVTRLIQEAGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V +E ++ D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTSVKDIEKYVELADLVLVMTVEPGFGGQSFMADMMPKVEWLRN--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+ +V G++ + + ++ KS L
Sbjct: 179 PKTIDCCAKAGANWIVSGTAVVGAADQRQVIGDMRNVVKSYL 220
>gi|317011687|gb|ADU85434.1| ribulose-phosphate 3-epimerase [Helicobacter pylori SouthAfrica7]
Length = 217
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 125/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G ++ ++ S +
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVILENVTQISKAP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A I+ H E+ H R L+ I ++G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLKPAFISIHAENEKHPHRVLQLIKSLGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIQRYNPSCLLEVDGGVNDQN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++ K
Sbjct: 179 IFELQQAGVDIVVSGSYIFKSKDRKLAIEGLQNVNK 214
>gi|148667822|gb|EDL00239.1| ribulose-5-phosphate-3-epimerase, isoform CRA_e [Mus musculus]
gi|187466000|emb|CAQ52186.1| ribulose-5-phosphate-3-epimerase [Mus musculus]
Length = 235
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 11/224 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDV-------MDGCFVPNISFGADV 53
M +I PSIL +D + LG E + +GA +H D + FVPNI+FG V
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDAPCSSGRSVFLHFVPNITFGHPV 60
Query: 54 IRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
+ SLR D FD H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 61 VESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGM 120
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + ++
Sbjct: 121 KVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PTLD 178
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+EVDGGV ++ +AGA+++V GS+ + L +
Sbjct: 179 IEVDGGVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRN 222
>gi|289425490|ref|ZP_06427267.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes SK187]
gi|289428512|ref|ZP_06430196.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes J165]
gi|295130758|ref|YP_003581421.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes SK137]
gi|289154468|gb|EFD03156.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes SK187]
gi|289158206|gb|EFD06425.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes J165]
gi|291375287|gb|ADD99141.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes SK137]
gi|313764278|gb|EFS35642.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL013PA1]
gi|313772004|gb|EFS37970.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL074PA1]
gi|313791964|gb|EFS40065.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL110PA1]
gi|313801553|gb|EFS42793.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL110PA2]
gi|313807697|gb|EFS46184.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL087PA2]
gi|313810204|gb|EFS47925.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL083PA1]
gi|313812768|gb|EFS50482.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL025PA1]
gi|313816369|gb|EFS54083.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL059PA1]
gi|313818734|gb|EFS56448.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL046PA2]
gi|313820504|gb|EFS58218.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL036PA1]
gi|313822690|gb|EFS60404.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL036PA2]
gi|313825376|gb|EFS63090.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL063PA1]
gi|313827341|gb|EFS65055.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL063PA2]
gi|313830535|gb|EFS68249.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL007PA1]
gi|313833571|gb|EFS71285.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL056PA1]
gi|313838907|gb|EFS76621.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL086PA1]
gi|314915755|gb|EFS79586.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL005PA4]
gi|314918183|gb|EFS82014.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL050PA1]
gi|314920259|gb|EFS84090.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL050PA3]
gi|314924984|gb|EFS88815.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL036PA3]
gi|314931479|gb|EFS95310.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL067PA1]
gi|314955488|gb|EFS99891.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL027PA1]
gi|314957864|gb|EFT01967.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL002PA1]
gi|314960350|gb|EFT04452.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL002PA2]
gi|314962620|gb|EFT06720.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL082PA1]
gi|314967515|gb|EFT11614.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL037PA1]
gi|314973535|gb|EFT17631.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL053PA1]
gi|314975757|gb|EFT19852.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL045PA1]
gi|314978684|gb|EFT22778.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL072PA2]
gi|314983763|gb|EFT27855.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL005PA1]
gi|314989754|gb|EFT33845.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL005PA3]
gi|315077836|gb|EFT49887.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL053PA2]
gi|315084790|gb|EFT56766.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL027PA2]
gi|315085475|gb|EFT57451.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL002PA3]
gi|315088468|gb|EFT60444.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL072PA1]
gi|315095809|gb|EFT67785.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL038PA1]
gi|315098711|gb|EFT70687.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL059PA2]
gi|315101520|gb|EFT73496.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL046PA1]
gi|315108808|gb|EFT80784.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL030PA2]
gi|327326362|gb|EGE68152.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL096PA2]
gi|327330433|gb|EGE72182.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL097PA1]
gi|327331763|gb|EGE73500.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL096PA3]
gi|327443540|gb|EGE90194.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL013PA2]
gi|327445744|gb|EGE92398.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL043PA2]
gi|327448273|gb|EGE94927.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL043PA1]
gi|327450605|gb|EGE97259.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL087PA3]
gi|327453317|gb|EGE99971.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL092PA1]
gi|327454056|gb|EGF00711.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL083PA2]
gi|328753138|gb|EGF66754.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL025PA2]
gi|328754023|gb|EGF67639.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL087PA1]
gi|328754751|gb|EGF68367.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL020PA1]
gi|328760949|gb|EGF74514.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL099PA1]
gi|332675602|gb|AEE72418.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes 266]
Length = 223
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPS--ADGLHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD V GS+ + + L+ ALA
Sbjct: 181 IERAAEAGADTFVAGSAVYRSDNPD---HVVASLRNRALAA 218
>gi|289705543|ref|ZP_06501935.1| ribulose-phosphate 3-epimerase [Micrococcus luteus SK58]
gi|289557772|gb|EFD51071.1| ribulose-phosphate 3-epimerase [Micrococcus luteus SK58]
Length = 223
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 126/217 (58%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PSIL+ADF+RL +E++ I A +H DVMD FVPN++ G V+ ++R +D
Sbjct: 7 RLHPSILSADFARLADELARIPS--ADAVHVDVMDNHFVPNLTLGLPVVEAIRRATDLPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI D A+AG + +TFH E+S R R + A G K G+A+ P T V
Sbjct: 65 DLHLMIEDADRWAPGYAEAGAESVTFHAEASAAPVRLARELRAAGAKAGMALRPATAVEP 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
D++ E+DM+L+MTV PGFGGQ ++ +PKIR+A+ + ++L+VDGGV I
Sbjct: 125 YLDMLPELDMLLLMTVEPGFGGQAFLDVVLPKIRRARRALDGGPVPLALQVDGGVNRETI 184
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AGAD+ V GS+ F + + L A
Sbjct: 185 ERAAEAGADVFVAGSAVFGAEDPDAALVGLRTAAARA 221
>gi|261403670|ref|YP_003247894.1| ribulose-phosphate 3-epimerase [Methanocaldococcus vulcanius M7]
gi|261370663|gb|ACX73412.1| ribulose-phosphate 3-epimerase [Methanocaldococcus vulcanius M7]
Length = 237
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 124/221 (56%), Gaps = 4/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I SIL+ADF L EEI +AG H D+MDG FVPNIS G + + ++ +D
Sbjct: 2 IKIGASILSADFGHLKEEIKRAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTDLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++D IN + D ITFH E+ R + I +G K VA+NP TP+
Sbjct: 62 VDVHLMVENVDLFINEFEE--MDYITFHIEAVRFPFRIINKIKNIGAKPIVALNPATPLD 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++DE+ +L+MTV PGF GQ+ I KIR+ K++I + + VDGG+
Sbjct: 120 EIEYILDEVYAVLVMTVEPGFSGQKFIPVMTKKIRKLKSMIVENGYDTKIFVDGGINVET 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V+AGAD+L+ S+ F ++ + K L D AL I
Sbjct: 180 APMAVKAGADVLIAASAIFGKEDVKTAVKNLRDSALKALNI 220
>gi|312879346|ref|ZP_07739146.1| ribulose-5-phosphate 3-epimerase [Aminomonas paucivorans DSM 12260]
gi|310782637|gb|EFQ23035.1| ribulose-5-phosphate 3-epimerase [Aminomonas paucivorans DSM 12260]
Length = 235
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYS 61
+ PS+L+A+ + I+ + +H DVMDG FVPN+++G +R+LR Y
Sbjct: 8 RRFLLAPSLLSANPLSVEASIARL-GGEEDWLHVDVMDGHFVPNLTYGPGFVRALRARYP 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D+ D HLM+ + ++ A+AG D++T H E++PH+ R L I G GV++NP T
Sbjct: 67 DAFLDVHLMVQPPEDFVDSFAEAGADLLTVHGEATPHLHRLLGRIREKGCAAGVSLNPGT 126
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA--KALIGKRSISLEVDGGVT 179
PV + V+ D++L+M+VNPGFGGQ+ + + K+ + + S +E+DGG+
Sbjct: 127 PVEWIAPVLHLADLVLLMSVNPGFGGQKFLPEVLEKVTALCRRRAVRGESFLVEMDGGLG 186
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N+ +V AG ++V GS+ F +R+
Sbjct: 187 PDNVDLVVSAGCQVVVAGSAVFGAPDPAETLRRMR 221
>gi|210135713|ref|YP_002302152.1| ribulose-phosphate 3-epimerase [Helicobacter pylori P12]
gi|210133681|gb|ACJ08672.1| D-ribulose-5-phosphate-3-epimerase [Helicobacter pylori P12]
Length = 217
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 121/217 (55%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLEKVTQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G G+ +NP T
Sbjct: 59 LDVHLMVENAGFFVELFAPLKPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + LEVDGGV +N
Sbjct: 119 SIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKHYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I L QAG D++V GS F K + L + KS
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNANKS 215
>gi|84496641|ref|ZP_00995495.1| ribulose-phosphate 3-epimerase [Janibacter sp. HTCC2649]
gi|84383409|gb|EAP99290.1| ribulose-phosphate 3-epimerase [Janibacter sp. HTCC2649]
Length = 218
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PSIL+ADF+ L E+ I + A H DVMD FVPN++ G ++ SL S
Sbjct: 1 MQISPSILSADFANLQSELEAI--SNADWAHVDVMDNHFVPNLTLGLPIVESLLKVSPIP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D A+AG +TFH E++ + R + A G + G+AI P TP A
Sbjct: 59 LDCHLMIEDPDRWAPAYAEAGAQSVTFHIEAARDPQTLARALRAAGARAGMAIKPGTPWA 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
D++ E+DM+L+MTV PGFGGQ + + K+ + + + + I ++VDGGV+++
Sbjct: 119 PYADLLPELDMVLVMTVEPGFGGQSFMADQMAKVAEVRQAVERHGGEIWIQVDGGVSAKT 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I+ +AGAD+ V GS+ + + L L S
Sbjct: 179 IEKCAEAGADVFVAGSAVYGAESAAGAVNELRSLAAS 215
>gi|227875401|ref|ZP_03993542.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris ATCC 35243]
gi|227843955|gb|EEJ54123.1| ribulose-phosphate 3-epimerase [Mobiluncus mulieris ATCC 35243]
Length = 218
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 130/222 (58%), Gaps = 8/222 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PS+L D +++ I A +H D+MD FVPN+++G +++ +
Sbjct: 2 KIKIYPSVLNCDQMHFANQLNAIDS--ADGVHLDIMDNHFVPNLTWGLPTAQAVVKSTTL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D A AGC I++FH E++ R+ I +G K G+A+NP TPV
Sbjct: 60 PVDAHLMIDNPDRWAPEYAKAGCSIVSFHFEAAKAPLRTAEAIRELGAKPGIALNPATPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++L D++ D +L+M+V PGFGGQ I PKI++ + +I + + +EVDGG++ +
Sbjct: 120 SVLADILPRFDQVLLMSVEPGFGGQGFIPEVYPKIKRLRKMIEEARLSTDIEVDGGISDK 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
NI +V+AGA+++V GS F ++ A+ + L++ A+ +
Sbjct: 180 NIAKVVEAGANVIVAGSFVFKREP----ARAIAKLREIAVGV 217
>gi|126272981|ref|XP_001367469.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase [Monodelphis
domestica]
Length = 225
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 7/217 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I SIL++D + LG E + + +G +H DVMDG VPNI+FG V+ SLR
Sbjct: 1 MASGCKIGLSILSSDLACLGAECTRMLDSGTNYLHLDVMDGHCVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A A + TFH E++ + I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAIAEANQYTFHLEATENPGAL---IRENGMKVGLAIK 117
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E + K+ + S+ +EVDGGV
Sbjct: 118 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMLKVHWLRTQF--PSLDIEVDGGV 175
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ K S L +
Sbjct: 176 GPDTIHKCAEAGANMIVSGSAIMRSKDPRSVINLLRN 212
>gi|19114917|ref|NP_594005.1| ribulose phosphate 3-epimerase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|51701874|sp|O14105|RPE_SCHPO RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|2388956|emb|CAB11689.1| ribulose phosphate 3-epimerase (predicted) [Schizosaccharomyces
pombe]
Length = 228
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 71/223 (31%), Positives = 131/223 (58%), Gaps = 8/223 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PS+LA DF+ L +E+ + K G+ +H DVMD FVPN++ G V++++R++
Sbjct: 3 QAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTK 62
Query: 64 ---VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
FDCHLM+ + +I+ +ADAG + FH E++ + H G G A+ P+
Sbjct: 63 EEAFFDCHLMVIEPERYIDQLADAGASLFCFHYEATEKHEEIISRAHEKGMLVGCALKPK 122
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV ++ ++++DM+L+MTV PG GGQ + +PK+ + ++++EVDGG++
Sbjct: 123 TPVEVILPFVEKLDMVLVMTVEPGKGGQSFMPECLPKVEFLRK--KYPTLNVEVDGGLSL 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + + AGA+++V G++ F+ + + ++ L+ S +
Sbjct: 181 KTVDAAADAGANVIVAGTAVFHAQSPE---EVISGLRNSVMKA 220
>gi|78188158|ref|YP_378496.1| ribulose-phosphate 3-epimerase [Chlorobium chlorochromatii CaD3]
gi|78170357|gb|ABB27453.1| ribulose-5-phosphate 3-epimerase [Chlorobium chlorochromatii CaD3]
Length = 218
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS+L+ADF+RL + ++ ++GA+ +H D+MDG FVPNISFG +++++ S + +
Sbjct: 4 ILAPSVLSADFTRLADSLTIANESGAEWMHCDIMDGNFVPNISFGPFIVKAVASCTSMII 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+ D I AG IT H E+ PH+ R+++ I + G K GV+INP TPV+
Sbjct: 64 DTHLMITDPDRFIEEFVKAGSHQITVHQEACPHLHRTIQLIKSFGVKAGVSINPGTPVSA 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
LE V+ ++D++L+M+VNPGFGGQ+ I S + K++Q + K + + VDGG+T N
Sbjct: 124 LEAVLTDLDLVLLMSVNPGFGGQKFIPSAVGKVQQLHEMRMKLNPEMVIAVDGGITEENA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+S+V AGAD L+ G++FF A + +
Sbjct: 184 QSVVSAGADALIAGTAFFKAPDPAKTAATIRAM 216
>gi|164659476|ref|XP_001730862.1| hypothetical protein MGL_1861 [Malassezia globosa CBS 7966]
gi|159104760|gb|EDP43648.1| hypothetical protein MGL_1861 [Malassezia globosa CBS 7966]
Length = 266
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 4/221 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
PS+++ PS+LA+D L E + + + GA +H DVMDG FV +I G I S+R +
Sbjct: 1 MPSVKVAPSLLASDLGNLSYECNRMIRCGADWLHMDVMDGHFVSSIVMGPPAIESVRKHV 60
Query: 62 D-SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ DCH+M+S I IA+AG TFH ES+ +R I A G + +AINP
Sbjct: 61 PEAFMDCHMMVSEPLKWIQPIANAGGSSYTFHLESTNDPVEVIRQIKASGMRASIAINPG 120
Query: 121 TPVAIL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP + +++ +DMIL+MTV PG GGQ+ I +PK+ + +A + + +EVDGGV
Sbjct: 121 TPATEISDEIAHAVDMILVMTVWPGAGGQKFIAECVPKVAELRARYPE--LDVEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I + AGA+++V G++ F + + L + + A
Sbjct: 179 PKTICACANAGANVIVAGTAVFRDSKPDAVIQYLREQCEQA 219
>gi|315046652|ref|XP_003172701.1| ribulose-phosphate 3-epimerase [Arthroderma gypseum CBS 118893]
gi|311343087|gb|EFR02290.1| ribulose-phosphate 3-epimerase [Arthroderma gypseum CBS 118893]
Length = 252
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 87/246 (35%), Positives = 130/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + K + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 1 MGPPAIIAPSILSADFGSLGAACSGLMKDDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + DAGCD+ FH E++
Sbjct: 61 VQRPTSAGGKGTFDCHMMIAEPQKWVKEFKDAGCDLYCFHYEAAVKSTAAKEPSDNSTIA 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
R +R IH +G + G+AI PET V +L +++ + DM+L+MTVNPGFGGQ+
Sbjct: 121 QTSPRELIRYIHELGMQAGIAIKPETSVNVLWEILENKEEIERPDMVLVMTVNPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ +A +++EVDGG+ I AGA+++V GS+ F +
Sbjct: 181 FMASELPKVQALRA--KYPDMNIEVDGGLGVGTIDQAADAGANVIVAGSAVFGAQNPAEV 238
Query: 210 AKRLND 215
+L +
Sbjct: 239 IAKLRE 244
>gi|157364706|ref|YP_001471473.1| ribulose-phosphate 3-epimerase [Thermotoga lettingae TMO]
gi|157315310|gb|ABV34409.1| Ribulose-phosphate 3-epimerase [Thermotoga lettingae TMO]
Length = 216
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 130/214 (60%), Gaps = 4/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SILA+D SRL EE+ + IH DVMDG FVPNI+FG V+ ++R +D
Sbjct: 3 MISASILASDLSRLSEEVKRVEP-YIDMIHLDVMDGVFVPNITFGFPVLEAVRKCTDLPI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + + ++ D G II H E+ H+ + + I G + VA+NP TP+ +
Sbjct: 62 DAHLMIINPEKYVERFIDLGASIIAVHYEACVHLHKVVYQIKDKGAQAYVALNPHTPIEM 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L ++++++D +LIMTVNPGF GQ+ I+S++ KIR+ +I K+ + + VDGG+ +
Sbjct: 122 LSEILEDLDGVLIMTVNPGFSGQKFIQSSVEKIRKLSEMIQKKGLKTKIMVDGGINENTV 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +V +GA++LV+G F S+ ++L +K
Sbjct: 182 EKVVCSGAEILVMGYGIFRS-DFASFKRKLEAIK 214
>gi|52840901|ref|YP_094700.1| D-ribulose-5-phosphate-3-epimerase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52628012|gb|AAU26753.1| D-ribulose-5-phosphate-3-epimerase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 217
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSYSD 62
+ QI+PS+L+AD +RLGEE+ + KAGA IHFDVMD +VPN++FG + ++ + +
Sbjct: 2 TFQILPSLLSADVTRLGEEVDTVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIKKFPN 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + +D+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP T
Sbjct: 62 LPIDVHLMTTPVDTLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L + +L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +N
Sbjct: 122 IDTLTWCAHNLKFVLVMTVNPGFGGQKLIPEVIPKLSKIRQQ--HPNLDLCVDGGVTPQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I SL AGA+ V GS+ FN KR+ +
Sbjct: 180 IASLAHAGANQFVAGSAIFNSSNYSETIKRMRE 212
>gi|227496157|ref|ZP_03926463.1| ribulose-phosphate 3-epimerase [Actinomyces urogenitalis DSM 15434]
gi|226834302|gb|EEH66685.1| ribulose-phosphate 3-epimerase [Actinomyces urogenitalis DSM 15434]
Length = 231
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 78/225 (34%), Positives = 132/225 (58%), Gaps = 7/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PSIL AD + L EE++ I A +H DVMD FVPN+ G +++ +
Sbjct: 1 MSNTPAIHPSILNADQAHLAEELARIES--ADGLHLDVMDNHFVPNMFAGPSFTQTVLEH 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI D A+ GC ++T H E++ ++ +H +G + G+A+ P
Sbjct: 59 TSLPVDAHLMIEDADRWAPQYAEMGCAVVTAHAEATRAPFVLVKELHRLGAQAGIALRPT 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TP+ ++E ++ EIDM+LIMTV PGFGGQ +E + KI A++++ + + +++DGGV
Sbjct: 119 TPLEVVEPLLGEIDMLLIMTVEPGFGGQSFVEPMLRKIAAARSMVSAQGLQLRIQIDGGV 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ I+ +AGAD+ V GS+ + + A+ ++ L++ A A+
Sbjct: 179 SLTTIERAAEAGADVFVAGSAVYKSQD---AAQAISTLRRLAGAV 220
>gi|108804201|ref|YP_644138.1| ribulose-5-phosphate 3-epimerase [Rubrobacter xylanophilus DSM
9941]
gi|108765444|gb|ABG04326.1| ribulose-5-phosphate 3-epimerase [Rubrobacter xylanophilus DSM
9941]
Length = 225
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 8 VPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDC 67
PSIL+ADF+ L +E+ + GA+ +HFDVMD FVPN++ G V SL ++ D
Sbjct: 14 APSILSADFAHLADEVERARRGGAELVHFDVMDNHFVPNLTVGPAVAASLVEATELPVDA 73
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HL + + DS I +AG I+ E++ H+ R+L+ I + G + GVA+NP TP +L
Sbjct: 74 HLQVENPDSLIPAFIEAGVASISVQVEAATHLHRTLKLIKSGGCEAGVALNPTTPPELLG 133
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+ +D +L+M+VNPGFGGQ+ I + K+R+ + + + +EVDGG+T+ +V
Sbjct: 134 WALPYLDYVLVMSVNPGFGGQRFIPEMVQKVRRIREMAP---VPVEVDGGITAETAPLMV 190
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+AGA +LV GS+ + + +R+ + ++A
Sbjct: 191 KAGAQVLVAGSAVYRG-DPAAEMRRIIEAGRAA 222
>gi|317013347|gb|ADU83955.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Lithuania75]
Length = 217
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 124/217 (57%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I +G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLKPQIISIHAENEKHPHRVLQLIKNLGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I L QAG D++V GS F K + L + KS
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNANKS 215
>gi|319760686|ref|YP_004124624.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia vafer str.
BVAF]
gi|318039400|gb|ADV33950.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia vafer str.
BVAF]
Length = 223
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 136/219 (62%), Gaps = 3/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF++LGEE+ + AGA +HFDVMD +VPN+S G V++SLR+Y
Sbjct: 1 MMNKFLIAPSILSADFAKLGEEVLCVISAGADMLHFDVMDNHYVPNLSIGPMVLKSLRNY 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI ID I+ DAG I+FHPE++ +I RS++ I G G+ +NP
Sbjct: 61 GVTVPVDVHLMIKPIDGLISDFVDAGAHCISFHPEATENIDRSIQLIRKHGCGVGLVLNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
T + L+ VI+++D+I +M+VNPGFGGQ + T+ KIRQ + LI +ISL VDGG
Sbjct: 121 GTTLECLKYVINKVDVITLMSVNPGFGGQVFLPETLNKIRQTRKLINAIDDTISLAVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ N ++ ++GA++ ++GS+ FN R +
Sbjct: 181 INFGNFNAVRESGANIFIIGSAIFNSTNYHDVICRFRSM 219
>gi|257051918|ref|YP_003129751.1| ribulose-phosphate 3-epimerase [Halorhabdus utahensis DSM 12940]
gi|256690681|gb|ACV11018.1| ribulose-phosphate 3-epimerase [Halorhabdus utahensis DSM 12940]
Length = 216
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 127/214 (59%), Gaps = 8/214 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAADF+ L ++ + A +H DVMDG FVPNISFG VI SLR +D F
Sbjct: 3 RIAPSILAADFADLYGDVRQVESAEI--LHLDVMDGHFVPNISFGPPVISSLRERTDLYF 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI ++ +AG D +T H ES + +IH G G+A+NP+T V
Sbjct: 61 DTHLMIEHPSEYVEAFQNAGADRLTVHVESEDDPGAVIESIHDHGMDAGIALNPDTDVGR 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E +D+++++L+M+V PGFGGQ + T+ +I + A+ +EVDGGV S
Sbjct: 121 VEPYLDDVEVVLVMSVQPGFGGQSFMPKTLDRIERLDAMGAA---EIEVDGGVNSETGPK 177
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V+AGA+ LV+GSS F Q A+ L DL++S
Sbjct: 178 CVEAGAETLVIGSSLFGQSD---VARALADLRES 208
>gi|255716382|ref|XP_002554472.1| KLTH0F06116p [Lachancea thermotolerans]
gi|238935855|emb|CAR24035.1| KLTH0F06116p [Lachancea thermotolerans]
Length = 236
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 14/225 (6%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M I + PSILA+DF+ L + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 1 MVKPI-VAPSILASDFANLECSCHKVINAGADWLHIDVMDGHFVPNITLGQPIVASLRKA 59
Query: 60 ----------YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
+ FDCH+M+ S + + A G D TFH E++ ++ I +
Sbjct: 60 VPRVQDTTATKPKAFFDCHMMVESPEKWVADFAKCGADQFTFHYEATKDPLALVKLIKSH 119
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
+ AI P TPV +L ++ +DM L+MTV PGFGGQ+ + +PK+ +A +
Sbjct: 120 NIRAACAIKPGTPVDVLYELGPHLDMALVMTVEPGFGGQKFMIEMMPKVEALRAKF--PN 177
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++VDGG+ I +AGA+++V G+S F +
Sbjct: 178 MDIQVDGGLGKDTIPHAAKAGANVIVAGTSVFTAADPADVISFMK 222
>gi|314966586|gb|EFT10685.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL082PA2]
Length = 223
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPS--ADGLHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWAPQYVEAGAQSVTFHLEAATAPIKLARELQSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD V GS+ + + L+ ALA
Sbjct: 181 IERAAEAGADTFVAGSAVYRSGNPD---HVVASLRNRALAA 218
>gi|270001129|gb|EEZ97576.1| hypothetical protein TcasGA2_TC011438 [Tribolium castaneum]
Length = 230
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 3/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
+I PSIL AD S+L E + GA +H DVMDG FVPN+S G V++ LR
Sbjct: 9 KCKIGPSILNADLSQLYVESQRLLDNGADYLHLDVMDGHFVPNLSIGHPVVKCLRNKIRT 68
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ F+ H+M+S + +A+AG + TFH E + R + G + G+A+ P T
Sbjct: 69 AFFETHMMVSEPGKWVEPMAEAGVNQYTFHIEPVKDVIPLCRKVREAGMQVGLALKPGTG 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ + ID DMILIMTV PGFGGQ+ + +PK++ + + +EVDGGV
Sbjct: 129 IEAVRQYIDHADMILIMTVEPGFGGQKFMGEMMPKVQWLRH--NYPGLDIEVDGGVGLNT 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I + +AGA+++V G++ N + + L + +S++
Sbjct: 187 ITACAEAGANMIVSGTAIINANDQKAVIASLRETVESSI 225
>gi|296161471|ref|ZP_06844277.1| ribulose-phosphate 3-epimerase [Burkholderia sp. Ch1-1]
gi|295888286|gb|EFG68098.1| ribulose-phosphate 3-epimerase [Burkholderia sp. Ch1-1]
Length = 239
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 89/220 (40%), Positives = 134/220 (60%), Gaps = 6/220 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+ADF+RL +EI +T AGA IH DVMD +VPN++ G V ++R ++
Sbjct: 1 MRDFLIAPSLLSADFARLADEIRAVTAAGADWIHLDVMDNHYVPNLTVGPLVCAAIRPHT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM +DS + A+AG + I+FHPE+S H+ R++ I + G + G+A+NP T
Sbjct: 61 SVPIDVHLMTMPVDSLVAGFAEAGANTISFHPEASLHVHRTIELIKSSGARAGLALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVD 175
P+A+L+ VI+ +D++L+M+VNPGFGGQ I T+ K+R + + R + +EVD
Sbjct: 121 PLAVLDHVIERLDVVLLMSVNPGFGGQAFIPETLDKLRVLRERVDAAMQRTGRLLLIEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV + NI + AGAD+ V GS+ F + D
Sbjct: 181 GGVKAANIARIAAAGADVFVAGSAVFGAGDYAQAIGTMRD 220
>gi|288918236|ref|ZP_06412591.1| ribulose-phosphate 3-epimerase [Frankia sp. EUN1f]
gi|288350406|gb|EFC84628.1| ribulose-phosphate 3-epimerase [Frankia sp. EUN1f]
Length = 241
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 119/210 (56%), Gaps = 3/210 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PS+LAADF R+ + + A +H DVMD FVPN++F D + +LR +D+
Sbjct: 9 TAQIYPSMLAADFGRIADAARAV-AGHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDT 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E+ I R+ I A G +TG+A+ P TPV
Sbjct: 68 PLDCHLMIDDPDRWAPGFAERGAANVTIHAEAVDDIARTTDAIRAAGARTGLAVKPATPV 127
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D++L+MT+ PGFGGQ+ ++ +PKI A+ LI R + L++DGGV
Sbjct: 128 EHYLDDLHRFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDDRGLDLWLQIDGGVNRE 187
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I+ +AG D+ V G++ F + + +
Sbjct: 188 TIERSAEAGVDVFVAGTAVFGLEDPAAAVE 217
>gi|78043975|ref|YP_360308.1| ribulose-phosphate 3-epimerase [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996090|gb|ABB14989.1| ribulose-phosphate 3-epimerase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 219
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 134/214 (62%), Gaps = 6/214 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL ADFS L + + GAK +H D+MDG FVPN++FG V++SLR+ ++ +
Sbjct: 3 VNIAPSILNADFSNLELVLKQLETGGAKYLHLDIMDGHFVPNLTFGPPVVKSLRAKTNLI 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ +S I +AG D+IT H ES+ H R L+ I GKK G+A+NP T
Sbjct: 63 FDVHLMVEKPESLIEPFIEAGADMITIHWESTRHPHRLLQKIKDSGKKAGIALNPATLPE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
LE ++D ID+ILIM+VNPGFGGQ I + + KIR+ K+++ K + I L VDGG+ +
Sbjct: 123 NLEYLLDLIDLILIMSVNPGFGGQSFINNQLTKIRKVKSMVCKAPQEILLGVDGGINLQT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++AGA+ LV GS F K L DL
Sbjct: 183 APLVIEAGANFLVTGSFLFKG----DVIKNLKDL 212
>gi|145347973|ref|XP_001418433.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578662|gb|ABO96726.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVF 65
I PS+L+ DF+R+ +E + GA +H DVMDG FVPN++FGA V+ SLR + D+ F
Sbjct: 11 ISPSLLSCDFARMADESRKVIACGADWLHLDVMDGHFVPNLTFGAPVLTSLRPHVPDAYF 70
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSP---HIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+++ +I +A A ++ TFH E+ + R+ + G + G+AI P T
Sbjct: 71 DVHLMVTNPLDYIEPMAKAKTNMFTFHAEACDGDAGVERACEEVRKAGMEVGIAIKPGTA 130
Query: 123 VAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V ++ +++ DM+L+MTV PGFGGQ+ K+++ + K + ++VDGG+++
Sbjct: 131 VDVVHSSVEKGLCDMVLVMTVEPGFGGQKFNPECCEKVKRLRERFPK--LKIQVDGGLSA 188
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I + +AGA+++V GSS F + K ++ L++
Sbjct: 189 STIDAAAEAGANVIVAGSSVFGSDD---WTKAIDVLRE 223
>gi|225848864|ref|YP_002729028.1| ribulose-phosphate 3-epimerase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643845|gb|ACN98895.1| ribulose-phosphate 3-epimerase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 220
Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats.
Identities = 89/216 (41%), Positives = 132/216 (61%), Gaps = 7/216 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ADFS+LG++I + +AGA IH D+MDG +VPNI+FG V+ S+R ++ FD
Sbjct: 4 LAPSILSADFSKLGQQIKEVEEAGADIIHLDIMDGRYVPNITFGIPVVESIRPITNLPFD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + AG D+I+FH +++ H R + I + G K GV +NP TPV L
Sbjct: 64 AHLMIVEPEKYALDFIKAGVDMISFHMDATIHSHRLVDLIKSNGAKAGVVLNPATPVNTL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK---ALIGKRSISLEVDGGVTSRNI 183
E++I ID +LIM+VNPGFGGQ+ I T K+++ G+ I +E+DGGV+ NI
Sbjct: 124 EEIIHYIDYVLIMSVNPGFGGQKFIPQTAEKVKKLILLMEQTGRTDILIEIDGGVSKENI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L G ++ V GS+ F + + LK++
Sbjct: 184 NYLSMLGVNIFVAGSAVFKG----DIKENVKILKQN 215
>gi|294101397|ref|YP_003553255.1| ribulose-phosphate 3-epimerase [Aminobacterium colombiense DSM
12261]
gi|293616377|gb|ADE56531.1| ribulose-phosphate 3-epimerase [Aminobacterium colombiense DSM
12261]
Length = 243
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSD 62
+ + PS+L+AD + + I+ + + +H D+MDG FVPN+S+G + ++LRS Y
Sbjct: 13 AFLVAPSLLSADILNMEKSIT-LLQGTHDWLHLDIMDGHFVPNLSYGPGLAKALRSSYPS 71
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+V D HLM+ + I+ A A D +T H E++PH+ R L I +G + GVA+NP TP
Sbjct: 72 TVIDAHLMVVPPEDFIDAFAAAKPDYLTVHVEATPHLHRVLSRIRDLGCRPGVALNPATP 131
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V + V+ +D++L+M+VNPGFGGQ I T+ K ++S +++DGG+
Sbjct: 132 VEWIYPVLPMVDLVLVMSVNPGFGGQSFISETLQKTVDLYRHRVAHNLSFLIQMDGGIGR 191
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +V +G D++V+GSS F + L K A
Sbjct: 192 ETIREVVSSGCDVVVMGSSIFGTPDPAETIRELRACVKGA 231
>gi|119962223|ref|YP_947576.1| ribulose-phosphate 3-epimerase [Arthrobacter aurescens TC1]
gi|119949082|gb|ABM07993.1| ribulose-phosphate 3-epimerase [Arthrobacter aurescens TC1]
Length = 224
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 4/210 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L E+ I + A +H DVMD FVPN++ G V++ +++ S D
Sbjct: 6 INPSILSADFVNLEAELQRI--SNADAVHVDVMDNHFVPNLTLGLPVVQRIQAVSPVPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS D ADAG +TFH E++ + R + A G K G+A+ P TPV
Sbjct: 64 AHLMISDADRWAPAYADAGVASVTFHAEAAMAPVKLARELRARGSKAGMALRPATPVEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
D++ E+DM+LIMTV PGFGGQ ++ T+PKIR+A+A I I +++VDGG+T I
Sbjct: 124 LDMLSELDMLLIMTVEPGFGGQSFLDITLPKIRRARAAIEGSGIGVAIQVDGGITEETIV 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+AGA++ V GS+ + RL
Sbjct: 184 RAAEAGANVFVAGSAVYGHADPAEAIDRLR 213
>gi|147678114|ref|YP_001212329.1| pentose-5-phosphate-3-epimerase [Pelotomaculum thermopropionicum
SI]
gi|146274211|dbj|BAF59960.1| pentose-5-phosphate-3-epimerase [Pelotomaculum thermopropionicum
SI]
Length = 224
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 89/221 (40%), Positives = 137/221 (61%), Gaps = 5/221 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+A+F+ L E++ +AGA+ +H DVMDG FVPN++ G V+ +L+
Sbjct: 2 IKLAPSILSANFAALLEDVLKAEEAGAEYLHIDVMDGHFVPNLTVGPLVVEALKGRCRMC 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D I+ AG D++T H E+ H+ R+L TI G K GVA+NP T
Sbjct: 62 LDVHLMIENPDVFIDRFIAAGADLVTVHAEACRHLHRTLSTIKEKGAKAGVALNPATSPR 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E ++ D++L+MTVNPGFGGQQ I +PKIRQ + ++ +R I ++VDGG+ +
Sbjct: 122 LIECILPMADLVLLMTVNPGFGGQQFIPEVLPKIRQVRNMLDERGIKAEIQVDGGINAST 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ V+AGA +LV GS+ F S + L+ +A+ +
Sbjct: 182 AAAAVEAGATVLVAGSAVFGSGDIPS---AIAQLRTAAMRV 219
>gi|195121434|ref|XP_002005225.1| GI19203 [Drosophila mojavensis]
gi|193910293|gb|EDW09160.1| GI19203 [Drosophila mojavensis]
Length = 221
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL AD + L E + GA +H DVMDG FVPN++FG +++ LR++
Sbjct: 1 MPIQAKIGPSILNADLANLAAESQKLLDNGADYLHLDVMDGAFVPNLTFGHPMVKCLRNH 60
Query: 61 SD-SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I +ADAG ++ TFH E + R I G K G+AI P
Sbjct: 61 IKEAFFETHMMVQNPEQWITPMADAGVNLYTFHVEPVKDVCSVTRKIQEAGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V +E ID D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTEVKEIEKYIDVADLVLVMTVEPGFGGQSFMADMMPKVEWLRN--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+ +V G++ + + ++ KS L
Sbjct: 179 PKTIDCCAKAGANWIVSGTAVVGSADQRQVIGEMRNVVKSYL 220
>gi|320527287|ref|ZP_08028472.1| ribulose-phosphate 3-epimerase [Solobacterium moorei F0204]
gi|320132311|gb|EFW24856.1| ribulose-phosphate 3-epimerase [Solobacterium moorei F0204]
Length = 217
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 5/205 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+ D+S + E+ + + A+ +HFDVMDG FV N++FG D+++ S
Sbjct: 1 MIVAPSVLSLDYSHMTEQCELLNSSKAEWMHFDVMDGHFVKNLTFGPDILKGFVKLSPLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAINPET 121
D HLM++ ++ +AG D ITFH E+ I+ + IH GKK G+ + P+T
Sbjct: 61 KDVHLMVTDPKMFADVFINAGADQITFHVETIYDKEEIKALAKHIHEQGKKAGLTLKPQT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P+ +L+ + + D+ LIM+V PGFGGQ+ + + +IR + + + +EVDGG+
Sbjct: 121 PIEVLKPFLHDFDLFLIMSVEPGFGGQKFMPEALERIRTLRTWLNDEGLDTHIEVDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK 204
+AGAD+LV GS F
Sbjct: 181 EETGALCAEAGADVLVAGSYVFKNN 205
>gi|88607073|ref|YP_504641.1| ribulose-phosphate 3-epimerase [Anaplasma phagocytophilum HZ]
gi|88598136|gb|ABD43606.1| ribulose-phosphate 3-epimerase [Anaplasma phagocytophilum HZ]
Length = 236
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 137/214 (64%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + S+L+ADFS L EEI+ ++ AGA +H DVMDGCFVP+++ G VI +R ++
Sbjct: 23 VVVSASMLSADFSNLREEIAAVSTAGADWLHIDVMDGCFVPSLTMGPVVISGIRKCTNMF 82
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ H+ + DAG D+IT H ES H+ R ++ I GKK GV+I P+T +
Sbjct: 83 LDVHLMINRPGDHLKSVVDAGADMITVHAESEVHLCRLIKQIKLYGKKVGVSIVPKTHHS 142
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+LE +I ++D++L+M+V+PGFGGQ +E + KI + +I + S + VDGGV++ N
Sbjct: 143 VLEYIIHDLDVVLVMSVDPGFGGQAFLEPQLKKIEHIRKMIEESSSTAKIAVDGGVSTDN 202
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++++AGA++LVVG++ F + L
Sbjct: 203 ARAVIEAGANILVVGTALFAADDMSKVVRTLKSF 236
>gi|303279797|ref|XP_003059191.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459027|gb|EEH56323.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 272
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 124/227 (54%), Gaps = 6/227 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSY 60
TP +I PS+LA DF+ + E + AGA +H DVMDG FVPN+SFGA VI+ L +
Sbjct: 3 TPPAKISPSLLACDFANIETEAKRVLDAGADWLHLDVMDGHFVPNLSFGAPVIKCLHKKL 62
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINP 119
D+ D HLM+++ ++ + DAG + TFH E++ G K G+A+ P
Sbjct: 63 PDAFLDVHLMVTNPKDYVAPMKDAGATMFTFHVEATTDGGADVAAAARGAGMKVGIALKP 122
Query: 120 ETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+TP + + D+ +DMIL+MTV PGFGGQ+ + + K R + + + ++VDGG
Sbjct: 123 QTPPEAVYALCDKGGVDMILVMTVEPGFGGQKFQPAMMAKARTLRNKYAE--LDIQVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+ ++ AGA+++V GSS + K L + A A +
Sbjct: 181 LDGVTVREAAVAGANVIVAGSSVYGAKDIPDAIATLRAAVEKARAAE 227
>gi|184155722|ref|YP_001844062.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum IFO 3956]
gi|260663561|ref|ZP_05864451.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum 28-3-CHN]
gi|183227066|dbj|BAG27582.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum IFO 3956]
gi|260552102|gb|EEX25155.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum 28-3-CHN]
Length = 217
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + K GA+ +H DVMDG FVP+IS+G ++++R S V
Sbjct: 2 IKVAPSILSADYVNLQKDIEMVEKGGAEVLHIDVMDGSFVPSISYGPGFVKAIRPISKMV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + DAG DII E++ HI R+L+ I G K V INP TPV
Sbjct: 62 LDVHLMVQNPEHILPDFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ V+ +D +L+MTVNPGFGGQ+ + T+ KI + AL + +E+DGGV +
Sbjct: 122 MIKPVLHMVDQVLVMTVNPGFGGQKFLPETVAKIAELDALKKELGYDFDIEIDGGVNDQT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS F+ + ++ ++ D
Sbjct: 182 VVDCYKAGATVAVAGSFVFDNEDPVAQINKIKD 214
>gi|116670234|ref|YP_831167.1| ribulose-5-phosphate 3-epimerase [Arthrobacter sp. FB24]
gi|116610343|gb|ABK03067.1| ribulose-5-phosphate 3-epimerase [Arthrobacter sp. FB24]
Length = 230
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L E+ I + A +H DVMD FVPN++ G V++ +++ S D
Sbjct: 6 INPSILSADFVNLEAELHRI--SNADAVHVDVMDNHFVPNLTIGLPVVQRIQAVSPVPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ D ADAG +TFH E+S + R + A G K G+A+ P TPV
Sbjct: 64 AHLMIADADRWAPAFADAGLASVTFHVEASIAPIKLARELRARGAKAGMALRPGTPVEPY 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIK 184
D++ E+D++LIMTV PGFGGQ ++ T+PKIR+A+A I ++L+VDGG+T I
Sbjct: 124 LDMLSELDLLLIMTVEPGFGGQSFLDLTLPKIRRARAAIDGSGTGVALQVDGGITEETIV 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA++ V GS+ + + + RL
Sbjct: 184 RAAEAGANVFVAGSAVYGAEDPAAAIDRLRA 214
>gi|227515686|ref|ZP_03945735.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum ATCC 14931]
gi|227085934|gb|EEI21246.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum ATCC 14931]
Length = 222
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD+ L ++I + K GA+ +H DVMDG FVP+IS+G ++++R S V
Sbjct: 7 IKVAPSILSADYVNLQKDIEMVEKGGAEVLHIDVMDGSFVPSISYGPGFVKAIRPISKMV 66
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + DAG DII E++ HI R+L+ I G K V INP TPV
Sbjct: 67 LDVHLMVQNPEHILPDFIDAGADIIGVQVEATQHIHRALQIIKNGGVKAEVVINPGTPVD 126
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
+++ V+ +D +L+MTVNPGFGGQ+ + T+ KI + AL + +E+DGGV +
Sbjct: 127 MIKPVLHMVDQVLVMTVNPGFGGQKFLPETVAKIAELDALKKELGYDFDIEIDGGVNDQT 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA + V GS F+ + ++ ++ D
Sbjct: 187 VVDCYKAGATVAVAGSFVFDNEDPVAQINKIKD 219
>gi|312195560|ref|YP_004015621.1| ribulose-phosphate 3-epimerase [Frankia sp. EuI1c]
gi|311226896|gb|ADP79751.1| ribulose-phosphate 3-epimerase [Frankia sp. EuI1c]
Length = 238
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 126/218 (57%), Gaps = 5/218 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PS+LAADF R+ + + A +H DVMD FVPN++F D + +LR+ +++
Sbjct: 5 QIYPSLLAADFGRIADAARAVE-GRADWLHVDVMDYHFVPNLAFSGDTVTALRAATETPL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMIS D A+ G +T H E+ ++ R+ I A G +TG+A+ P TPV
Sbjct: 64 DCHLMISDPDRWAPGFAERGAANVTIHAEAVENLPRTTEAIRAAGARTGLAVKPATPVEG 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
D + D++L+MT+ PGFGGQ ++S +PKI+ A+ L+ +R + L++DGGV + I
Sbjct: 124 YADDLHRFDLLLLMTIEPGFGGQTFMDSVLPKIQAARRLLDQRGLDLWLQIDGGVNAETI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN--DLKKS 219
+ AG D+ V G++ + + + L L+ S
Sbjct: 184 ERAAAAGVDVFVAGTAVYGLADPGAAVEALRAQALRAS 221
>gi|167753260|ref|ZP_02425387.1| hypothetical protein ALIPUT_01532 [Alistipes putredinis DSM 17216]
gi|167659191|gb|EDS03321.1| hypothetical protein ALIPUT_01532 [Alistipes putredinis DSM 17216]
Length = 208
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 81/205 (39%), Positives = 129/205 (62%), Gaps = 2/205 (0%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+L+ADF L + I ++ A+ +H DVMDG FVPNISFG V++++R + + D HLM
Sbjct: 1 MLSADFGHLERDTQMIDRSAAEWVHIDVMDGVFVPNISFGFPVMKAIRKATSKLLDVHLM 60
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
I + ++ A+AG I+TFH E++ + + + IH G K GV+I P T V +L D++
Sbjct: 61 IVEPEKYVTRFAEAGAGIVTFHYEATLNPKGCIDLIHRAGAKAGVSIKPATSVEVLRDIV 120
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQ 188
ID++L+M+V PGFGGQ + ++ KIR+ +A+I + + +EVDGG+++ N + L
Sbjct: 121 PLIDLVLVMSVEPGFGGQSFMPDSLEKIRELRAMIDETESTAVIEVDGGISAHNSRLLFD 180
Query: 189 AGADLLVVGSSFFNQKGEISYAKRL 213
AGAD LV GS+ F + +R+
Sbjct: 181 AGADALVAGSAVFGAPDPQAEIERM 205
>gi|116490837|ref|YP_810381.1| ribulose-5-phosphate 3-epimerase [Oenococcus oeni PSU-1]
gi|118587052|ref|ZP_01544482.1| ribulose-phosphate 3-epimerase [Oenococcus oeni ATCC BAA-1163]
gi|290890282|ref|ZP_06553361.1| hypothetical protein AWRIB429_0751 [Oenococcus oeni AWRIB429]
gi|116091562|gb|ABJ56716.1| ribulose-5-phosphate 3-epimerase [Oenococcus oeni PSU-1]
gi|118432462|gb|EAV39198.1| ribulose-phosphate 3-epimerase [Oenococcus oeni ATCC BAA-1163]
gi|290480068|gb|EFD88713.1| hypothetical protein AWRIB429_0751 [Oenococcus oeni AWRIB429]
Length = 223
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 129/215 (60%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
S+ + PSILAAD+ LGE+I + AGAK +H D+MDG FVP+IS+G ++ ++ S S
Sbjct: 2 SVIVAPSILAADYLNLGEQIKLVEGAGAKYLHIDIMDGDFVPSISYGPQWVKQIKASGSK 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLM++ + I+ AG DII H E++ HI R+L+ I G V INP TP
Sbjct: 62 LVLDVHLMVNHPEKLIDSFVSAGADIIGVHVEATAHIHRALQMIKNAGVHPEVVINPGTP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
V+ + ++ +D +L+MTVNPGFGGQ+ + I KI + + + +E+DGGV +
Sbjct: 122 VSAILPILYMVDQVLVMTVNPGFGGQKFLPEEISKISELHEYKKEHGLDFDIEIDGGVNN 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + +AGA + V GS +++ + K+L +
Sbjct: 182 QTLVKAYEAGATVAVAGSYVYDKVDPAAKVKKLLE 216
>gi|86741874|ref|YP_482274.1| ribulose-5-phosphate 3-epimerase [Frankia sp. CcI3]
gi|86568736|gb|ABD12545.1| ribulose-5-phosphate 3-epimerase [Frankia sp. CcI3]
Length = 236
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 81/220 (36%), Positives = 123/220 (55%), Gaps = 5/220 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PS+LAADF R+ + + A +H DVMD FVPN++F D + +LR+ +D+
Sbjct: 3 TAQIYPSLLAADFGRIADAALAVE-GQADWLHVDVMDYHFVPNLAFAPDTVTALRAVTDT 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E+ + R+ R I A G +TG+A+ P TPV
Sbjct: 62 PLDCHLMIDDPDRWAAGYAERGAANVTIHAEAVSDLPRTTRAIRAAGARTGLAVKPNTPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D++L+MT+ PGFGGQ + +PKI A+ L+ R + L++DGGV +
Sbjct: 122 EHYLDDLHRFDLLLLMTIEPGFGGQTFMTEVLPKIEAARRLLDARGLDLWLQIDGGVNAG 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND--LKKS 219
I+ AG D+ V G++ F +RL + L+ +
Sbjct: 182 TIERAAVAGVDVFVAGTAVFGAADPGQAVERLREQALRAA 221
>gi|71748742|ref|XP_823426.1| ribulose-5-phosphate 3-epimerase [Trypanosoma brucei TREU927]
gi|70833094|gb|EAN78598.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma brucei]
gi|261333380|emb|CBH16375.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 246
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 84/224 (37%), Positives = 130/224 (58%), Gaps = 8/224 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNI---TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
S I PSILA+DF++L E ++ A +H DVMDG FVPNIS G V++SLRS+
Sbjct: 20 SAIIAPSILASDFAQLLSECQSVLSPEGGAADWLHVDVMDGHFVPNISIGMCVVQSLRSH 79
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D D H M+S D + +A AG +TFH E+ + R I A G GVA+ P
Sbjct: 80 LQDVFLDVHCMVSDPDRWVEEMAKAGATQMTFHVEAVADPKAVARHIRAAGMLCGVALKP 139
Query: 120 ETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+TPV+ + ++++E IDM+L+MTV PGFGGQ ++ +PK+ + +A ++++VDGG
Sbjct: 140 KTPVSSVLNLVEEQLIDMVLVMTVEPGFGGQSFMQDMMPKVEELRARF--PCLNIQVDGG 197
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I + +AGA+++V G+S F + + + + L
Sbjct: 198 IGPGTIDAPARAGANVIVAGTSIFRADSRKEATESMRRVVQGYL 241
>gi|50954786|ref|YP_062074.1| ribulose-phosphate 3-epimerase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951268|gb|AAT88969.1| ribulose-phosphate 3-epimerase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 220
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 121/218 (55%), Gaps = 8/218 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ +I PSILAADF L ++ I A A +H DVMD FVPN++FG ++ ++ S
Sbjct: 2 AARINPSILAADFVNLERDLGRI--ASADLVHVDVMDSHFVPNLTFGPQMVGRIQDVSAI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D A+ G +TFH E++ R + A+G + G+A+ P T V
Sbjct: 60 PLDVHLMIDDPDRWAPGYAELGAHSVTFHAEAAADPVALARRLRALGARAGIALKPGTAV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D++ E D +L+MTV PGFGGQ + T+PK+R+ + + R + LEVDGG+T
Sbjct: 120 DGYLDLLPEFDQVLVMTVEPGFGGQSFMLETMPKLRRLRETVEARGLDVWLEVDGGITEE 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I +AGAD V GS+ F + A+R+ L+ +
Sbjct: 180 TIAVAAEAGADTFVAGSAVFRGEP----AERIEALRAA 213
>gi|315080461|gb|EFT52437.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL078PA1]
Length = 223
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPS--ADGLHIDVMDGRFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD V GS+ + + L+ ALA
Sbjct: 181 IERAAEAGADTFVAGSAVYRSDNPD---HVVASLRNRALAA 218
>gi|302664068|ref|XP_003023670.1| ribulose phosphate 3-epimerase (predicted) [Trichophyton verrucosum
HKI 0517]
gi|291187676|gb|EFE43052.1| ribulose phosphate 3-epimerase (predicted) [Trichophyton verrucosum
HKI 0517]
Length = 317
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/260 (33%), Positives = 128/260 (49%), Gaps = 47/260 (18%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF LG S + + IH D+MDG FVPNI+FG V+ +R++
Sbjct: 52 MGPPAIIAPSILSADFGSLGAACSGLMDNDSDWIHVDIMDGHFVPNITFGPPVVSKIRTH 111
Query: 61 SDSV--------FDCHLMISS--------------IDSHINIIADAGCDIITFHPESSPH 98
FDCH+MI+ DAGCD+ FH E++
Sbjct: 112 VQRPTCAGGKGTFDCHMMIAEVPTPFRFLRIPMPQPQKWAKEFKDAGCDLYCFHYEAAVE 171
Query: 99 -----------------IRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDM 135
+ +R IH +G + G+AI PET V +L D++ + DM
Sbjct: 172 STAAKEPSDNTTTEKTSPKELIRYIHELGMQAGIAIKPETSVNVLWDILENKEAIERPDM 231
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+L+MTVNPGFGGQ+ + S +PK++ +A +++EVDGG+ I AGA+++V
Sbjct: 232 VLVMTVNPGFGGQKFMASELPKVQALRA--KYPDMNIEVDGGLGVGTIDQAADAGANVIV 289
Query: 196 VGSSFFNQKGEISYAKRLND 215
GS+ F + +L +
Sbjct: 290 AGSAVFGAQNPAEVIAKLRE 309
>gi|226288340|gb|EEH43852.1| ribulose-phosphate 3-epimerase [Paracoccidioides brasiliensis Pb18]
Length = 251
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/246 (34%), Positives = 129/246 (52%), Gaps = 33/246 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVI------ 54
M P I PSIL+ADF+ LG E S++ K+ + IH D+MDG FVPNI+FGA V+
Sbjct: 1 MAPPTIIAPSILSADFASLGSECSHLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRLH 60
Query: 55 --RSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
R R FDCH+MIS + DAGCD+ FH E++
Sbjct: 61 VERPSRRLGKGTFDCHMMISEPQKWVKDFKDAGCDLYCFHYEAAMTSTAAKVPADKSTTR 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQ 149
+R IH + G+AI P+T V +L D++++ D++L+MTV PGFGGQ+
Sbjct: 121 RTSPTELIRYIHEQEMQAGIAIKPDTSVDVLWDILEQKDPMDRPDIVLVMTVYPGFGGQK 180
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ + +++EVDGG+ + +AGA+++V GS+ F+ +
Sbjct: 181 FMASELPKVNALRTRY--PDLNIEVDGGLGEGTVDLAAEAGANVIVAGSAVFSAQDPAKV 238
Query: 210 AKRLND 215
L D
Sbjct: 239 IAMLRD 244
>gi|148360682|ref|YP_001251889.1| D-ribulose-5-phosphate-3-epimerase [Legionella pneumophila str.
Corby]
gi|296106253|ref|YP_003617953.1| ribulose-phosphate 3-epimerase [Legionella pneumophila 2300/99
Alcoy]
gi|148282455|gb|ABQ56543.1| D-ribulose-5-phosphate-3-epimerase [Legionella pneumophila str.
Corby]
gi|295648154|gb|ADG24001.1| ribulose-phosphate 3-epimerase [Legionella pneumophila 2300/99
Alcoy]
Length = 217
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 88/221 (39%), Positives = 137/221 (61%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSYSD 62
+ QI+PS+L+AD +RLGEE+ + KAGA IHFDVMD +VPN++FG + ++ + +
Sbjct: 2 TFQILPSLLSADMTRLGEEVDAVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIKKFPN 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + +D+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP T
Sbjct: 62 LPIDVHLMTTPVDTLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L + +L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +N
Sbjct: 122 IDTLTWCAHNLKFVLVMTVNPGFGGQKLIPEVIPKLSKIRQQ--HPNLDLCVDGGVTPQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I SL AGA+ V GS+ FN Y++ + +++ +I
Sbjct: 180 IASLAHAGANQFVAGSAIFNSSN---YSETIKHMREQLASI 217
>gi|261203103|ref|XP_002628765.1| ribulose-phosphate 3-epimerase [Ajellomyces dermatitidis SLH14081]
gi|239586550|gb|EEQ69193.1| ribulose-phosphate 3-epimerase [Ajellomyces dermatitidis SLH14081]
Length = 252
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 90/246 (36%), Positives = 132/246 (53%), Gaps = 35/246 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MTP I PSIL+ADF+ LG S++ G IH D+MDG FVPNI+FG V+ +R +
Sbjct: 1 MTPPAIIAPSILSADFAALGSACSDVMDWGGDWIHVDIMDGHFVPNITFGPPVVTKIRKH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + + AGC++ FH E++
Sbjct: 61 VAEPNKHCEKGTFDCHMMIA--EKWVKEFKKAGCNLYCFHYEAAVASTAAKDPMDNSTTR 118
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQ 149
+R IH G + G+AI PET V +L D++D+ DM+LIMTV PGFGGQ+
Sbjct: 119 RTSPTELIRYIHDCGMRAGIAIKPETDVDVLWDILDQKDELDTPDMVLIMTVRPGFGGQK 178
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ES + K+R +A K I+++VDGG+ +K AGA+++V GS+ F+ +
Sbjct: 179 FMESQLEKVRALRARYPK--INIQVDGGLGEDTVKLAADAGANVIVAGSAVFHAQNPGHV 236
Query: 210 AKRLND 215
K L +
Sbjct: 237 IKLLRN 242
>gi|50842679|ref|YP_055906.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes KPA171202]
gi|50840281|gb|AAT82948.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes KPA171202]
gi|315105889|gb|EFT77865.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL030PA1]
Length = 223
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPS--ADGLHIDVMDGHFVPNLVMGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDWWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD V GS+ + + L+ ALA
Sbjct: 181 IERAAEAGADTFVAGSAVYRSDNPD---HVVASLRNRALAA 218
>gi|314987944|gb|EFT32035.1| ribulose-phosphate 3-epimerase [Propionibacterium acnes HL005PA2]
Length = 223
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 128/221 (57%), Gaps = 7/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSIL A+ + L E+ I A +H DVMDG FVPN+ GA + SLR ++ +
Sbjct: 3 VRITPSILNANLANLASEVGRIPS--ADGLHIDVMDGHFVPNLVRGAPFVESLRPATNLM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + D +AG +TFH E++ + R + +MG + VA+ P TPV
Sbjct: 61 FDVHLMIENPDRWARQYVEAGAQSVTFHLEAATAPIKLARELRSMGARASVALRPATPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
L D++ E D IL+MTV PGFGGQ+ ++ + KIR+A+ LI ++ I L++DGGV++
Sbjct: 121 QLADILTEFDQILLMTVEPGFGGQKFLDPVLAKIRKARKLIDATRKDIWLQIDGGVSADT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I+ +AGAD V GS+ + + L+ ALA
Sbjct: 181 IERAAEAGADTFVAGSAVYRSDNPD---HVVASLRNRALAA 218
>gi|323142742|ref|ZP_08077458.1| ribulose-phosphate 3-epimerase [Succinatimonas hippei YIT 12066]
gi|322417493|gb|EFY08111.1| ribulose-phosphate 3-epimerase [Succinatimonas hippei YIT 12066]
Length = 225
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 132/217 (60%), Gaps = 4/217 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SY 60
I SIL+AD L +++++ G+ IHFDVMD FVPN++FG ++++R +
Sbjct: 3 EKRFLIAGSILSADLLNLEKDVADALANGSDVIHFDVMDYHFVPNLTFGPGFLKAMRARF 62
Query: 61 SDSVFDCHLMISSI-DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+VFD HLM+ + D I A AG D+I+FHPE++ H+ R L I +G K G+A+NP
Sbjct: 63 PQAVFDVHLMVDPVTDKIIEDYAQAGADMISFHPETTFHVERMLTLIQNLGCKAGLALNP 122
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
T L + D++D +L+MTVNPGFGGQ+LI S + K+ K + + ++ +EVDGG
Sbjct: 123 GTAPQCLRYLWDKLDFVLVMTVNPGFGGQKLIPSCLQKVADVKRMATEANVKPLIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
V R IK+ AGA+L VVGS+FF + A L
Sbjct: 183 VDVRTIKACADAGANLFVVGSAFFGKPDRKEAATSLR 219
>gi|83815955|ref|YP_444165.1| ribulose-phosphate 3-epimerase [Salinibacter ruber DSM 13855]
gi|294505823|ref|YP_003569881.1| Ribulose-phosphate-3-epimerase [Salinibacter ruber M8]
gi|83757349|gb|ABC45462.1| ribulose-phosphate 3-epimerase [Salinibacter ruber DSM 13855]
gi|294342151|emb|CBH22929.1| Ribulose-phosphate-3-epimerase [Salinibacter ruber M8]
Length = 244
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 132/218 (60%), Gaps = 7/218 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD---S 63
+ PSI+A+D R + AG +H DVMDG FVPNI+ G DV+R+LR +D +
Sbjct: 24 LAPSIIASDSGRFAACADEVLGAGPDWLHVDVMDGHFVPNITIGPDVVRTLRPVADEHDA 83
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI +++ ADAG D++T H E+ PH+ R +TI A G + GVA+NP TP+
Sbjct: 84 QLDVHLMIEEPQQYVDTFADAGADMLTVHVEACPHLHRVAQTIRAAGCEVGVALNPATPL 143
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
LE ++ +D++L+M+VNPGF GQ I + K+++ + + +EVDGGVT
Sbjct: 144 GHLEGILPFVDLVLVMSVNPGFSGQSFIPESTAKVQRVRRQLNALGSSAYVEVDGGVTPN 203
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N LV+AGAD+LV GS+ F GE S + + L+ +
Sbjct: 204 NAMELVRAGADVLVSGSAVFG--GEQSVPQNVEALRNA 239
>gi|302381397|ref|YP_003817220.1| ribulose-phosphate 3-epimerase [Brevundimonas subvibrioides ATCC
15264]
gi|302192025|gb|ADK99596.1| ribulose-phosphate 3-epimerase [Brevundimonas subvibrioides ATCC
15264]
Length = 237
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 144/211 (68%), Gaps = 3/211 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSILA+DF++LG E++ I AGA +H DVMDG FVPNI+ G DV+++LR +
Sbjct: 18 MPTTPLICPSILASDFAKLGAEVAAIEAAGADWVHVDVMDGHFVPNITIGPDVVKALRPH 77
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLM++ +D + +AG DI+T HPES PH+ R+L I +G K GV +NP
Sbjct: 78 TSLPFDVHLMVAPVDPWLEAYREAGADILTVHPESGPHLHRTLGRIRQLGAKAGVVLNPG 137
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TP+++LEDVI+ +D++L+M+VNPGFGGQ I ST+ KI + +A++ L+VDGGV
Sbjct: 138 TPLSVLEDVIELVDLVLLMSVNPGFGGQSFIGSTLKKIERTRAMLDAAGSSAHLQVDGGV 197
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
T+ N + V AGAD LV G++ F G +Y
Sbjct: 198 TAANAGACVAAGADALVAGTAVFRG-GPDAY 227
>gi|320534323|ref|ZP_08034812.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133458|gb|EFW25917.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 231
Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 89/220 (40%), Positives = 133/220 (60%), Gaps = 9/220 (4%)
Query: 7 IVPSILAADFSRLGEEISNITKA----GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSIL D + L +E+ +T GA IH DVMD FVPN+S+G V+ ++ ++S
Sbjct: 4 IHPSILNCDIAHLADELDRVTGGAGTPGADGIHVDVMDNHFVPNLSWGLPVVEAVLAHSS 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI D A+AGC I+T H E++ R R +H +G G+A+ P TP
Sbjct: 64 LPVDAHLMIRDADRWAPTYAEAGCQIVTPHAEATTAPVRLARELHRLGAGAGIALRPATP 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ + DV+ + D++LIMTV PGFGGQ IES +PKI +A+ L+G R + L +VDGG+TS
Sbjct: 124 LEAVADVLGDFDLLLIMTVEPGFGGQSFIESMLPKIHRARELVGTRGLDLRVQVDGGITS 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I+ +AGAD+ V GS+ + +++L+++A
Sbjct: 184 QTIERAAEAGADVFVAGSAVYRADD---ALAAISELREAA 220
>gi|149198077|ref|ZP_01875124.1| ribulose-phosphate 3-epimerase [Lentisphaera araneosa HTCC2155]
gi|149138679|gb|EDM27085.1| ribulose-phosphate 3-epimerase [Lentisphaera araneosa HTCC2155]
Length = 220
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 90/201 (44%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PSILAADF+ L E+S +AGA+ IH DVMDG FVPNISFG VI LR++S++
Sbjct: 10 EIIVSPSILAADFANLAPEVSGAHEAGAQFIHLDVMDGHFVPNISFGPGVIGKLRAHSEA 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+FD HLMIS +I A AGCD +TFH ES + + IH+ G G+ + P T +
Sbjct: 70 LFDAHLMISHPQKYIEEFAQAGCDHVTFHIESDCDTQEVIDQIHSYGMSAGLTLKPGTDI 129
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
L +D+I+M+LIMTV PGFGGQ + + +I + K + ++VDGGV
Sbjct: 130 ETLLPFVDKIEMVLIMTVEPGFGGQSFMHDMVERITIIREANPK--LHIQVDGGVNKETS 187
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
K + AGA++LV G++FF
Sbjct: 188 KIVRDAGANVLVAGTAFFRHP 208
>gi|237751727|ref|ZP_04582207.1| ribulose-phosphate 3-epimerase [Helicobacter bilis ATCC 43879]
gi|229373093|gb|EEO23484.1| ribulose-phosphate 3-epimerase [Helicobacter bilis ATCC 43879]
Length = 213
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 80/212 (37%), Positives = 124/212 (58%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+Q+ PS+L+A+F L +EI ++ K G +H DVMDG FVPN++ G V+ ++ S+
Sbjct: 1 MQVAPSLLSANFLYLAQEIESVVKGGCDLLHIDVMDGHFVPNMTLGPCVLEGIKDISEIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+ D +++ A ++ H ES H+ R ++ I + G +A+NP TP+
Sbjct: 61 LDIHFMVEDADFFVDLYASLAPKYMSVHIESEKHLHRLIQKIRSYGISPAIALNPHTPLD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ ++ +IDM+LIM+VNPGFGGQQ I + I KI K +I R+ +EVDGG+ N
Sbjct: 121 GLKYILTDIDMVLIMSVNPGFGGQQFIPNMIEKIADLKDMILMRNPQCLIEVDGGINDTN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +L G D+ V G+ F QK ++L
Sbjct: 181 IHALKNVGVDIAVAGNYIFKQKDRKLAIQKLK 212
>gi|299131713|ref|ZP_07024908.1| ribulose-phosphate 3-epimerase [Afipia sp. 1NLS2]
gi|298591850|gb|EFI52050.1| ribulose-phosphate 3-epimerase [Afipia sp. 1NLS2]
Length = 233
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 102/211 (48%), Positives = 141/211 (66%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ I PS+LA+D++RLGEE+ + AGA +H DVMDG FVPNIS+G DVI+++R +S+
Sbjct: 8 RPLIIAPSVLASDYARLGEEVRAVDTAGADWLHMDVMDGHFVPNISYGPDVIKAMRPHSN 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+FD HLMI+ D ++ A AGCD IT H E+ PH+ RSL+ I A+GKK GVA+NP TP
Sbjct: 68 KIFDAHLMIAPCDPYLEAFAKAGCDHITVHAEAGPHLHRSLQAIRALGKKAGVALNPATP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+E V+D +D++L+M+VNPGFGGQ I + + KI +A+ R I +EVDGGVT+ N
Sbjct: 128 ANAIEYVLDLVDIVLVMSVNPGFGGQSFIPAVLEKITTIRAMCAGRPIDIEVDGGVTAGN 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ AGA+ V GSS F Y +
Sbjct: 188 AAQIAAAGANAFVAGSSVFKGGTFDHYKANI 218
>gi|169349821|ref|ZP_02866759.1| hypothetical protein CLOSPI_00559 [Clostridium spiroforme DSM 1552]
gi|169293389|gb|EDS75522.1| hypothetical protein CLOSPI_00559 [Clostridium spiroforme DSM 1552]
Length = 213
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 9/217 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+ADF+ L +EI I A+ IH+DVMDG FVPNISFG +++ + +D
Sbjct: 2 VKIAPSLLSADFACLKKEIDKIK--VAEWIHYDVMDGHFVPNISFGYSILKDVSKVTDKY 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMIS +++ + +I FH E+ I + ++ I G+AI P+T
Sbjct: 60 LDVHLMISDPFKYVDNFIASNASLIVFHYEAVEENEINKLIKHIKNNNIDVGIAIKPDTC 119
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+L+ + ++D++L+M+V PGFGGQ S I KI + L + + +EVDGG+
Sbjct: 120 QDVLKPFLSQLDLVLVMSVEPGFGGQTFNHSAIEKISKLAKLREENNYHYLIEVDGGINE 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K QAG D+LV GS FN Y K + LK
Sbjct: 180 STAKLCRQAGVDVLVAGSYVFNSDD---YTKAIESLK 213
>gi|57238786|ref|YP_179922.1| ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578711|ref|YP_196923.1| ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str.
Welgevonden]
gi|58616773|ref|YP_195972.1| ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str. Gardel]
gi|57160865|emb|CAH57767.1| ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str.
Welgevonden]
gi|58416385|emb|CAI27498.1| Ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str. Gardel]
gi|58417337|emb|CAI26541.1| Ribulose-phosphate 3-epimerase [Ehrlichia ruminantium str.
Welgevonden]
Length = 215
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SIL+ADF+ LG+ + +T AG IH DVMDG FV NI+ G VI ++R Y+
Sbjct: 2 VEISGSILSADFANLGKSVEMLTVAGVDYIHVDVMDGSFVSNITIGPVVISAIRQYTKIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI++ ++I DAG DIIT H ES H+ ++ I A GK G+++ P +
Sbjct: 62 FDVHLMINASSNYIENFVDAGADIITIHAESEVHLDGVIKKIKAYGKSAGISLVPTSHHN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
ILE +I ++D++L+MTVNPGFGGQ+ I S + KI + +I K S+ + VDGGV N
Sbjct: 122 ILEYIICDLDLVLVMTVNPGFGGQRFITSQLNKISSIRNIIQKYSLNTKIAVDGGVNIEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K ++ AGAD+LV+GS+ F Y K+L L
Sbjct: 182 AKDIIDAGADILVIGSALFKSNNMSEYIKQLKSL 215
>gi|313899940|ref|ZP_07833442.1| ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312955248|gb|EFR36914.1| ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 221
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 86/217 (39%), Positives = 126/217 (58%), Gaps = 5/217 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ D+SR E++ + ++ AK +HFDVMDG FVPN++FG D+++ +
Sbjct: 1 MKELVIAPSILSLDYSRTSEQLKELDESNAKWMHFDVMDGHFVPNLTFGPDLLKGFKKAV 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAIN 118
D V D H+M+ + D I A AG D+ITFH E+ + + R I MG + GV++
Sbjct: 61 DMVMDVHIMVDNPDMVAEIFAKAGADVITFHLEAVKDVDACIQLCRKIREMGVQAGVSVK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P+T V L + E+D++LIM+V PGFGGQ +E T+ K+R + I K ++ +E+DG
Sbjct: 121 PKTGVDALLTHLKEMDLVLIMSVEPGFGGQSFMEDTLEKVRILRERIEKEGLNTRIEIDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
G+ K V AG D LV GS F S K L
Sbjct: 181 GINGETAKLAVAAGVDTLVAGSYVFKNGIAESVDKLL 217
>gi|297837045|ref|XP_002886404.1| hypothetical protein ARALYDRAFT_475014 [Arabidopsis lyrata subsp.
lyrata]
gi|297332245|gb|EFH62663.1| hypothetical protein ARALYDRAFT_475014 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 127/221 (57%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR ++++
Sbjct: 5 SPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNA 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ +++ +A AG TFH E + + + + I + G + GVA+ P TP
Sbjct: 65 YLDCHLMVTNPMDYVDQMAKAGASGFTFHVEVAKENWQELVEKIKSAGMRPGVALKPGTP 124
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V + +++ ++M+L+MTV PGFGGQ+ + + + K+R + ++ +EVDGG+
Sbjct: 125 VEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPNMMDKVRALRN--KYPTLDIEVDGGLG 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + AGA+ +V GSS F L K A
Sbjct: 183 PSTIDAAAAAGANCIVAGSSVFGAPEPGDVISLLRASVKKA 223
>gi|332981570|ref|YP_004463011.1| ribulose-5-phosphate 3-epimerase [Mahella australiensis 50-1 BON]
gi|332699248|gb|AEE96189.1| ribulose-5-phosphate 3-epimerase [Mahella australiensis 50-1 BON]
Length = 222
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 92/221 (41%), Positives = 140/221 (63%), Gaps = 3/221 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++++PSIL+ADF LG I+ + K GA IH DVMDG FVPNIS G +++S++S+ +
Sbjct: 2 VKLIPSILSADFFDLGHAINELQKGGADGIHVDVMDGHFVPNISMGPMMVKSIKSHINMF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + D +I+ + AG D IT H E H R++ I G K +A+NP TP++
Sbjct: 62 MDVHLMIDNPDEYIDAFSKAGADSITVHAEVLRHPLRTIDIIKRNGLKAAIALNPATPLS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+L+ ++D DMIL+MTVNPGFGGQQ I S + KI K + R + +++DGG+T N
Sbjct: 122 VLDYIMDAADMILLMTVNPGFGGQQFIPSMLDKIADLKRIKDNRGFNFDIQIDGGITMDN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-DLKKSALA 222
+ +++ AGA+++V GS+ NQ A ++ + A+A
Sbjct: 182 VHAVMAAGANVIVTGSAILNQPDIAEAAADFKYNMLRGAMA 222
>gi|262202279|ref|YP_003273487.1| ribulose-phosphate 3-epimerase [Gordonia bronchialis DSM 43247]
gi|262085626|gb|ACY21594.1| ribulose-phosphate 3-epimerase [Gordonia bronchialis DSM 43247]
Length = 229
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 115/217 (52%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSIL+ADF+ L E + + G+ +H DVMD FVPN++ G V+ SL +D
Sbjct: 9 MIAPSILSADFANLAAEAAAVE--GSDWLHVDVMDAHFVPNLTLGLPVVESLLKATDIPI 66
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI + + A+AG +TFH E++ R I A G K G++I P TP+
Sbjct: 67 DCHLMIENPERWAPPYAEAGAHNVTFHAEATDDPIPVARDIRAAGAKAGLSIKPGTPLEP 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNI 183
+++ D +LIM+V PGFGGQ+ I + K R + +I + L E+DGG+ + I
Sbjct: 127 YLEILTSFDTLLIMSVEPGFGGQKFIPDVLEKARTIRKIIDAEDLQLLVEIDGGINADTI 186
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +AG D V GS+ + +L + A
Sbjct: 187 EQAAEAGIDCFVAGSAVYGAADPGVAVAKLREQAAQA 223
>gi|152990069|ref|YP_001355791.1| ribulose-phosphate 3-epimerase [Nitratiruptor sp. SB155-2]
gi|151421930|dbj|BAF69434.1| ribulose-phosphate 3-epimerase [Nitratiruptor sp. SB155-2]
Length = 212
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 89/215 (41%), Positives = 127/215 (59%), Gaps = 6/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF L +E+ +I +AGA +H DVMDG FVPN++ G V +++ + +
Sbjct: 1 MLVAPSILSADFGILAKEVIDICEAGADLVHVDVMDGHFVPNMTIGPVVAKAVAAVATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ +++ A I+FH ES H R + I G + INP TPV
Sbjct: 61 LDVHLMVEDNSFFVDLFAPLKPKYISFHYESEQHHHRVAQKIRDYGISPAIVINPATPVN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+LE++I +DM+L+M+VNPGFGGQ+ I KI+Q K LI K + +EVDGGV+ +N
Sbjct: 121 VLEEIIKYVDMVLLMSVNPGFGGQKFIP-VFDKIKQTKELIEKHNPSCLIEVDGGVSDKN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I L AG D+ V GS F K YA+ + LK
Sbjct: 180 IHELKAAGVDVAVAGSYVFGHKD---YAQAIASLK 211
>gi|293402256|ref|ZP_06646394.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304363|gb|EFE45614.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 221
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 131/209 (62%), Gaps = 5/209 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+L+ D++R+ E+++++ K A+ +HFDVMDG FVPN++FG D+++ +
Sbjct: 1 MKQKLVIAPSVLSLDYARVSEQLADLNKTRAEWMHFDVMDGHFVPNLTFGPDILKGFKKA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRR---SLRTIHAMGKKTGVAI 117
D V D H+M+S + I AG DI+TFH E+ I+ RTI ++G K GV++
Sbjct: 61 VDMVMDVHIMVSDPKFYAPIFIKAGADIVTFHYEAVASIKECVALCRTIRSLGAKVGVSV 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVD 175
P+TP+ + + E+D+ LIM+V PGFGGQ +E + K+R+ ++ I ++ +E+D
Sbjct: 121 RPKTPIDEILPYLHEMDVFLIMSVEPGFGGQSFMEDQLDKVRKLRSYIDAHELNVRIEID 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
GG+ ++ K ++AG D LV GS F Q
Sbjct: 181 GGINAKTAKQAIEAGCDTLVAGSYVFKQD 209
>gi|302848131|ref|XP_002955598.1| hypothetical protein VOLCADRAFT_109319 [Volvox carteri f.
nagariensis]
gi|300259007|gb|EFJ43238.1| hypothetical protein VOLCADRAFT_109319 [Volvox carteri f.
nagariensis]
Length = 258
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 21/239 (8%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PSIL++DF+RL +E + GA +H DVMDG FVPN++ GA ++ SLR ++D
Sbjct: 16 PPAIIAPSILSSDFARLADECKRMVDLGADWLHVDVMDGHFVPNLTLGAPIVASLRKHTD 75
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESS---------------PHIR--RSLRT 105
+ DCHLM ++ + + A AG D+ITFH E++ PH
Sbjct: 76 AFLDCHLMTTNPELWVKDFAKAGADMITFHLEAAAGPGPDDWHSLAPDQPHPAVVDMCHG 135
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
+ A G G+A+ P TPV + +++ +DM+L+MTV PGFGGQ + K +
Sbjct: 136 VRAAGMHVGLALKPATPVELAVPYVEQGLVDMVLVMTVEPGFGGQSFMADKAAKAAVLRK 195
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ ++VDGG+ + AGA+++V GS+ F ++L + +A
Sbjct: 196 KF--PDLLIQVDGGLAPATVDRAAAAGANVIVAGSAVFGAADPGVVIQQLRESVTAAAT 252
>gi|154149308|ref|YP_001406343.1| ribulose-phosphate 3-epimerase [Campylobacter hominis ATCC BAA-381]
gi|153805317|gb|ABS52324.1| ribulose-phosphate 3-epimerase [Campylobacter hominis ATCC BAA-381]
Length = 213
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF +L +EI+ + +AGA IH DVMDG FVPN++ G V++S+ +
Sbjct: 1 MYVAPSILSADFGKLNDEITAVCEAGADLIHVDVMDGHFVPNLTIGPVVVKSVAKIATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ N+ ++FH ES H R + I G G+ +NP T ++
Sbjct: 61 LDIHLMVDDNTFFTNLFIPLKPKFLSFHIESENHPLRLIDHIRKNGISPGIVLNPHTEIS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +I E+D++L+M+VNPGFGGQ+ I S I K R+ + LI K +EVDGGV N
Sbjct: 121 TLKYIIKEVDLVLLMSVNPGFGGQKFIPSIIEKSRELRELIYKTDAKCLIEVDGGVNGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L +AG D++V G+ F+ + SY + LK
Sbjct: 181 VAELDEAGVDIVVAGNYVFSSQ---SYKAAITSLK 212
>gi|15644465|ref|NP_229517.1| ribulose-phosphate 3-epimerase [Thermotoga maritima MSB8]
gi|4982295|gb|AAD36784.1|AE001811_4 ribulose-phosphate 3-epimerase [Thermotoga maritima MSB8]
Length = 220
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 129/216 (59%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA D +RL +E+ + + IHFDVMDG FVPNISFG V+++LR +
Sbjct: 2 VKIAASILACDLARLADEVKRVEEH-VDMIHFDVMDGHFVPNISFGLPVLKALRKETKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI++ + +I+ + G D++ H ES+ H+ R + + +G + VAINP TP+
Sbjct: 61 ISVHLMITNPEDYIDRFIEEGADMVAIHYESTFHLHRLVHRVKDLGARAFVAINPHTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L ++I ++D +L+M+VNPGF GQ+ I ++ KIR + ++ + + + VDGGV N
Sbjct: 121 LLSEIITDVDGVLVMSVNPGFSGQRFIARSLEKIRNLRKMVKELGLETEIMVDGGVNEEN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV+ GA +LV+G F + K + ++
Sbjct: 181 ASILVKNGATILVMGYGIFRNDNYVELIKSIKQERE 216
>gi|198423986|ref|XP_002130609.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase isoform 1
[Ciona intestinalis]
gi|198423988|ref|XP_002130627.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase isoform 2
[Ciona intestinalis]
Length = 231
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 124/217 (57%), Gaps = 9/217 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS--D 62
+I PSIL +D + LG E + + GA +H DVMDG FVPNI+FG V++ +R
Sbjct: 6 CKIGPSILNSDLACLGAECKRMLECGADYLHLDVMDGHFVPNITFGHPVVQCIRKSIGEG 65
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ + H+M+S D + ++++G +I TFH E+S + ++ ++ I G K G AI P TP
Sbjct: 66 PICEVHMMVSRPDQWVKAMSESGANIYTFHLEASDNPQQLIKEIREEGMKAGCAIKPATP 125
Query: 123 VAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V+ L D++ D+ L+MTV PGFGGQ + + K+R+ + + + VDGGV
Sbjct: 126 VSKLIDLLHTQMADVALVMTVEPGFGGQSFMRPMMEKVRELRK--AYPHLDIGVDGGVGP 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+I +AGA+++V GS+ K ++DL+
Sbjct: 184 SSIHHCAEAGANMIVSGSAIMRSNNPC---KVISDLR 217
>gi|163841090|ref|YP_001625495.1| ribulose-phosphate 3-epimerase [Renibacterium salmoninarum ATCC
33209]
gi|162954566|gb|ABY24081.1| ribulose-phosphate 3-epimerase [Renibacterium salmoninarum ATCC
33209]
Length = 224
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF L E++ I+ A A +H DVMD FVPN++ G ++ ++ S D
Sbjct: 4 IHPSILSADFVNLESELARISNAEA--VHVDVMDNHFVPNLTLGLPIVNRIQQVSPIPLD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS +D AD G +TFH E+S R R + G + G+A+ P TPV
Sbjct: 62 VHLMISDVDRWAPEYADIGAASVTFHVEASAAPIRLARELRQRGARAGMALRPATPVEPY 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
D++ E+DM+L+MTV PGFGGQ ++ +PKIR+A+A I ISL++DGG++ I+
Sbjct: 122 LDMLAELDMLLLMTVEPGFGGQAFLDVVLPKIRRARAAIDGSGAAISLQLDGGISIDTIE 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+AGA++ V GS+ +N + + L L
Sbjct: 182 RAAEAGANVFVAGSAVYNTPDPAAAIEALRRL 213
>gi|297837059|ref|XP_002886411.1| hypothetical protein ARALYDRAFT_893115 [Arabidopsis lyrata subsp.
lyrata]
gi|297332252|gb|EFH62670.1| hypothetical protein ARALYDRAFT_893115 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 127/221 (57%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FVPN++ GA VI SLR ++++
Sbjct: 5 SPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNA 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ +++ +A AG TFH E + + + + I + G + GVA+ P TP
Sbjct: 65 YLDCHLMVTNPMDYVDQMAKAGASGFTFHVEVAKENWQELVEKIKSAGMRPGVALKPGTP 124
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V + +++ ++M+L+MTV PGFGGQ+ + + + K+R + ++ +EVDGG+
Sbjct: 125 VEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPNMMDKVRALRN--KYPTLDIEVDGGLG 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + AGA+ +V GSS F L K A
Sbjct: 183 PSTIDAAAAAGANCIVAGSSVFGAPEPGDVISFLRASVKKA 223
>gi|269218511|ref|ZP_06162365.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211622|gb|EEZ77962.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 220
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 118/216 (54%), Gaps = 4/216 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ I PSIL DF L +E++ I + A H D+MD FVPN++ G + + S
Sbjct: 2 SVVISPSILNCDFGHLADELAKI--SNADFAHVDIMDNHFVPNLALGLPLAEAAVKSSPI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D + A+ GC+ +TFH E++ R R I AMG++ G+A+ P T +
Sbjct: 60 PVDAHLMIEDPDRWAPVYAELGCESVTFHAEAAQAPIRLAREIRAMGRRAGLALRPATGI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D++ E DMIL+MTV PGFGGQ IE+ +PK+ + + I + ++VDGGV+
Sbjct: 120 EPYLDILGEFDMILVMTVEPGFGGQPFIEAMMPKVSRTRRAIEAAGLDVWIQVDGGVSRS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+ +AGA+ V GS+ + + L L
Sbjct: 180 TIEKAAEAGANNFVAGSAVYKADDAAAEVDFLRSLA 215
>gi|298255259|ref|ZP_06978845.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae str.
Canada MDR_19A]
Length = 294
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 87/188 (46%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S VF
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMVF 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV
Sbjct: 65 DCHLMVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ V+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 125 IKHVLHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALRQEKGLNFEIEVDGGIDDQTI 184
Query: 184 KSLVQAGA 191
+AGA
Sbjct: 185 AQAKEAGA 192
>gi|114583055|ref|XP_001145990.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 8 [Pan
troglodytes]
Length = 225
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 108/193 (55%), Gaps = 4/193 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGA 191
+ + G
Sbjct: 179 GPDTVHKCAEIGV 191
>gi|255321504|ref|ZP_05362662.1| ribulose-phosphate 3-epimerase [Campylobacter showae RM3277]
gi|255301360|gb|EET80619.1| ribulose-phosphate 3-epimerase [Campylobacter showae RM3277]
Length = 215
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 5/215 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL+ADF L EI I +AGA +H DVMDG FVPN++ G V+ ++ +
Sbjct: 1 MYIAPSILSADFGNLKAEIEAICEAGADLVHVDVMDGHFVPNLTIGPVVVNAVAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + ++ ++FH E H R + I + G + +NP TPV+
Sbjct: 61 LDIHLMVQNNTFFADLFLPLKPKFLSFHIEEEKHPLRLIDHIRSHGVGPAIVLNPHTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +++E+DM+L+M+VNPGFGGQ+ I S + K + +I +++ +EVDGGVT N
Sbjct: 121 AIEHIVNEVDMVLLMSVNPGFGGQKFIPSVLEKALSLREMIERKNAKCMIEVDGGVTGLN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L +AG D++V GS F+ SY + LK
Sbjct: 181 VAQLDEAGVDIVVAGSYIFSSN---SYEHSIRSLK 212
>gi|54293648|ref|YP_126063.1| ribulose-phosphate 3-epimerase [Legionella pneumophila str. Lens]
gi|53753480|emb|CAH14935.1| ribulose-phosphate 3-epimerase [Legionella pneumophila str. Lens]
Length = 217
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 87/221 (39%), Positives = 137/221 (61%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSYSD 62
+ QI+PS+L+AD +RLGEE+ + KAG+ IHFDVMD +VPN++FG + ++ + +
Sbjct: 2 TFQILPSLLSADMTRLGEEVDAVMKAGSDFIHFDVMDNHYVPNLTFGPAFCDALIKKFPN 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + +D+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP T
Sbjct: 62 LPIDVHLMTTPVDTLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L + +L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +N
Sbjct: 122 IDTLTWCAHNLKFVLVMTVNPGFGGQKLIPEVIPKLSKIRQQ--HPNLDLCVDGGVTPQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
I SL AGA+ V GS+ FN Y++ + +++ +I
Sbjct: 180 IASLAHAGANQFVAGSAIFNSSN---YSETIKHMREQLASI 217
>gi|94469030|gb|ABF18364.1| ribulose-5-phosphate-3-epimerase [Aedes aegypti]
Length = 224
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 83/220 (37%), Positives = 126/220 (57%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
S +I PSIL AD S+L EE + GA +H DVMDG FVPN++FG V++ LR D
Sbjct: 5 SAKIGPSILNADLSQLHEESQRLLDNGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIKD 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPET 121
+ F+ H+M+ + I +ADAG + TFH E + R + G K G+AI P T
Sbjct: 65 AFFETHMMVQAPQQWIEPMADAGVNQYTFHIEPVMDSVVDICRKVQEAGMKVGLAIKPGT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +++ I DMILIMTV PGFGGQ+ + +PK++ + ++ +EVDGGV
Sbjct: 125 PVETVKEFIPLADMILIMTVEPGFGGQKFMNDMMPKVQWLRE--NYPNLDIEVDGGVGPG 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I + +AGA+++V G++ + + ++L + A+
Sbjct: 183 TIDACAKAGANMIVAGTAIIRADDQAAVIRQLKHSVECAI 222
>gi|317470723|ref|ZP_07930108.1| ribulose-phosphate 3-epimerase [Anaerostipes sp. 3_2_56FAA]
gi|316901858|gb|EFV23787.1| ribulose-phosphate 3-epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 215
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 131/218 (60%), Gaps = 5/218 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++ PSI AAD L +I + +G + +H DVMDG FV ++FGAD IR+L+S +
Sbjct: 1 MREMKLSPSIFAADLGELKSQIKELEDSGVELLHVDVMDGHFVERMAFGADHIRALKSMT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D D HLMI + HI+ IADAG DIIT H ES+ + L I G + G+ ++P T
Sbjct: 61 DIPLDVHLMIERPEVHIDSIADAGADIITIHQESTARVLSCLHKIRNRGIRAGIVLSPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P ++ ++D++DMIL+M+VNPG GGQ + ST+ KI+ +A+IG R I LEVDG +
Sbjct: 121 PEETIKYLLDDVDMILLMSVNPGEGGQHFLNSTVEKIKNVRAMIGDRDIDLEVDGSIDHE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
IK +AGA++ V G F + + L+K+
Sbjct: 181 TIKPCYEAGANVFVSGGYLFK-----NIKENTEALRKA 213
>gi|15827205|ref|NP_301468.1| ribulose-phosphate 3-epimerase [Mycobacterium leprae TN]
gi|221229683|ref|YP_002503099.1| ribulose-phosphate 3-epimerase [Mycobacterium leprae Br4923]
gi|17380276|sp|Q9CCP9|RPE_MYCLE RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|13092753|emb|CAC30062.1| putatibe ribulose-phosphate 3-epimerase [Mycobacterium leprae]
gi|219932790|emb|CAR70647.1| putatibe ribulose-phosphate 3-epimerase [Mycobacterium leprae
Br4923]
Length = 224
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 6/204 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSILAADF+RL +E + + A A +H DVMDG FVPN++ G V++SL +
Sbjct: 1 MGP--LIAPSILAADFARLTDEAAVV--ASADWLHVDVMDGHFVPNLTIGLPVVQSLLAA 56
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD DCHLMI + D A+AG +TFH E++ + I G K G+ + P
Sbjct: 57 SDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVAHDIRTAGAKAGIGVKPG 116
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TP+ D++ D +LIM+V PGFGGQ I + K+R + ++ + +I +E+DGG+
Sbjct: 117 TPLNPYLDILPHFDTLLIMSVEPGFGGQAFIPEVLSKVRTVRKMVDAGELTILVEIDGGI 176
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN 202
+ I+ +AG D V GS+ +
Sbjct: 177 NADTIEQAAEAGVDCFVAGSAVYG 200
>gi|222099880|ref|YP_002534448.1| Ribulose-phosphate 3-epimerase [Thermotoga neapolitana DSM 4359]
gi|221572270|gb|ACM23082.1| Ribulose-phosphate 3-epimerase [Thermotoga neapolitana DSM 4359]
Length = 221
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 129/215 (60%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA D +RL +E+ + + +HFDVMDG FVPNISFG V+++LR +
Sbjct: 3 VKIAASILACDLARLADEVKRVEEH-IDMVHFDVMDGHFVPNISFGLPVLKALRKETSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI++ + +++ + G D++ H E++PH+ R + I +G K VA+NP TPV
Sbjct: 62 ISVHLMITNPEDYVDRFVEEGADMVAVHYETTPHLHRIVHRIKDLGAKAFVALNPHTPVF 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+L ++I ++D +L+M+VNPGF GQ+ I ++ KIR K +I + + VDGGV N
Sbjct: 122 LLSEIITDVDGVLVMSVNPGFSGQRFIARSLEKIRSLKKMIRDLGLETEIMVDGGVNEEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L++ GA +LV+G F + + + + +
Sbjct: 182 ASILIKNGATILVMGYGIFKNENYVELVRSIKQER 216
>gi|148270148|ref|YP_001244608.1| ribulose-phosphate 3-epimerase [Thermotoga petrophila RKU-1]
gi|170288907|ref|YP_001739145.1| ribulose-phosphate 3-epimerase [Thermotoga sp. RQ2]
gi|281412510|ref|YP_003346589.1| ribulose-phosphate 3-epimerase [Thermotoga naphthophila RKU-10]
gi|147735692|gb|ABQ47032.1| ribulose-5-phosphate 3-epimerase [Thermotoga petrophila RKU-1]
gi|170176410|gb|ACB09462.1| Ribulose-phosphate 3-epimerase [Thermotoga sp. RQ2]
gi|281373613|gb|ADA67175.1| ribulose-phosphate 3-epimerase [Thermotoga naphthophila RKU-10]
Length = 220
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 128/215 (59%), Gaps = 3/215 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SILA D +RL +E+ + + IHFDVMDG FVPNISFG V+++LR +
Sbjct: 3 KIAASILACDLARLADEVKRVEEH-VDMIHFDVMDGHFVPNISFGLPVLKALRKETKLPI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
HLMI++ + +I+ + G D++ H ES+ H+ R + + +G + VAINP TP+ +
Sbjct: 62 SVHLMITNPEDYIDRFIEEGADMVAIHYESTFHLHRLVHRVKDLGAQAFVAINPHTPINL 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
L ++I ++D +L+M+VNPGF GQ+ I ++ KIR + ++ + + + VDGGV N
Sbjct: 122 LSEIITDVDGVLVMSVNPGFSGQRFIARSLEKIRNLRKMVKELGLETEIMVDGGVNEENA 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LV+ GA +LV+G F + K + ++
Sbjct: 182 SILVKNGATILVMGYGIFRNDNYVELIKSIKQERE 216
>gi|77024221|gb|ABA55581.1| chloroplast ribulose phosphate epimerase [Pavlova lutheri]
Length = 221
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 94/189 (49%), Positives = 134/189 (70%), Gaps = 3/189 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSIL+ADF+RLG+E++N+ +GA +HFDVMD +VPN++ G V ++LR +
Sbjct: 33 MASDFLIAPSILSADFARLGDEVTNVLASGADVVHFDVMDNHYVPNLTIGPMVCKALRKH 92
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+S +D I A+AG ITFHPE++ HI RSL+ + ++G K+G+ NP
Sbjct: 93 GVTAPIDVHLMVSPVDRIIGDFAEAGASYITFHPEATGHIDRSLQLVKSLGCKSGLVFNP 152
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
TP+ LE V+D++D+IL+M+VNPGFGGQ I +T+ K+RQA+ALI K R I LE+DGG
Sbjct: 153 ATPLDCLEYVMDKVDIILLMSVNPGFGGQAFIPATLDKLRQARALIDKSGRDIRLEIDGG 212
Query: 178 VTSRNIKSL 186
VT +NI +
Sbjct: 213 VTPKNIGEI 221
>gi|237785570|ref|YP_002906275.1| ribulose-phosphate 3-epimerase [Corynebacterium kroppenstedtii DSM
44385]
gi|237758482|gb|ACR17732.1| ribulose-phosphate 3-epimerase [Corynebacterium kroppenstedtii DSM
44385]
Length = 259
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 126/231 (54%), Gaps = 22/231 (9%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL+ADF+ L ++ ++ A IH DVMDG FVPN+SFG + +++ + D
Sbjct: 19 IAPSILSADFAHLARDLDAVSH--ADWIHVDVMDGHFVPNLSFGLPIAQAVARETQLPLD 76
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINPETPV 123
CHLMI + A+ +TFH E+ I ++ RT+ A G + G++I P+TPV
Sbjct: 77 CHLMIDDPERWAPDYAEFY--SVTFHAEAVDDIDAAIALARTLRAAGTRAGISIKPKTPV 134
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS------------ 171
+ ++E DM+LIM+V PGFGGQ+ + + K+R + +
Sbjct: 135 DEVLAHLEEFDMVLIMSVKPGFGGQKFMPEVLDKVRALRERADQIWGKETDDDSADGRCL 194
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+E+DGG+++ I S +AG D+ V GS+ + + +++L+++A A
Sbjct: 195 IEIDGGISADTIASAAEAGVDVFVAGSAVYQADSPNA---AIDELRENARA 242
>gi|297626326|ref|YP_003688089.1| Ribulose-phosphate 3-epimerase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|76556227|emb|CAD48939.1| ribulose-phosphate 3-epimerase [Propionibacterium freudenreichii
subsp. shermanii]
gi|296922091|emb|CBL56659.1| Ribulose-phosphate 3-epimerase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 222
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 83/219 (37%), Positives = 122/219 (55%), Gaps = 4/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PS+L AD + L E++ I A +H DVMD FVPN++ G V+ SL+ ++
Sbjct: 2 SMRITPSVLNADLADLAGEVARIPS--ADAVHIDVMDNHFVPNLTLGLPVVSSLQRHTKL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI DS A+AGC+ +TFH E++ R R I +G +A+ P TP+
Sbjct: 60 PFDIHLMIEDADSWAPQYAEAGCESVTFHAEATSAPVRLAREIRRLGSAASLALRPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D+I E D +LIMTV PGFGGQ+ ++ +PKIR+ +A+ + ++VDGGV+
Sbjct: 120 EPFADLIAEFDQVLIMTVEPGFGGQKFLDIMLPKIRRTRAIAAASGVELAIQVDGGVSVD 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I +AGAD+ V G++ F L A
Sbjct: 180 TIGRCAEAGADVFVAGTAVFRATDPDEMVTTLRQTAMQA 218
>gi|288573286|ref|ZP_06391643.1| ribulose-phosphate 3-epimerase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569027|gb|EFC90584.1| ribulose-phosphate 3-epimerase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 232
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 127/217 (58%), Gaps = 4/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSD 62
S++I PS+L+AD + + I+++ +H DVMDG FVPN+S+G+ ++ +LR Y D
Sbjct: 11 SLRIAPSLLSADPLSMSDSIASLNGTH-DWLHVDVMDGHFVPNLSYGSALVGALRKAYPD 69
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
V D HLM+ +S I D D +T H E++PH+ R L I G + GV +NP TP
Sbjct: 70 EVLDVHLMVEPPESFIESFLDKNPDFLTVHVEATPHLHRVLSRIRERGARPGVVLNPGTP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTS 180
V + V+ +DM+L+M+VNPGFGGQ I T+ K+ L R S +E+DGGV +
Sbjct: 130 VDAIFPVLSMVDMVLVMSVNPGFGGQSFIPETLSKLVDLCRLRASRKLSFLIEIDGGVGA 189
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N+ +V+ GAD+ V+GS+ F +++ +
Sbjct: 190 GNVAEIVRFGADVAVMGSAVFGTDDPGKTVEKIRKIA 226
>gi|295098908|emb|CBK87997.1| ribulose-5-phosphate 3-epimerase [Eubacterium cylindroides T2-87]
Length = 218
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 117/205 (57%), Gaps = 6/205 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L+ D+S++ E+I + ++ AK +HFDVMDG FVPNI+FG D+++ R S
Sbjct: 4 IIAPSVLSLDYSKMTEQIEQLNQSKAKWLHFDVMDGHFVPNITFGPDILKGFRKASPLFM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPH----IRRSLRTIHAMGKKTGVAINPET 121
D HLMIS + + I AG D+ITFH ES + ++ + + + G + P T
Sbjct: 64 DVHLMISDPEYYAPIFVKAGADMITFHVESFDNDTDKCLAFMQKMQDLHVQVGFTLRPAT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ E ++++ DM+L+M+VNPGFGGQ ++ + K+R ++ + +E+DGG+
Sbjct: 124 PIEPFEALLEKADMVLVMSVNPGFGGQSFMDDQLDKVRWLYKKREEKQLNYRIEIDGGIN 183
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQK 204
K AG D LV GS F
Sbjct: 184 HETYKKACDAGCDTLVAGSYVFKND 208
>gi|154495881|ref|ZP_02034577.1| hypothetical protein BACCAP_00161 [Bacteroides capillosus ATCC
29799]
gi|150275079|gb|EDN02127.1| hypothetical protein BACCAP_00161 [Bacteroides capillosus ATCC
29799]
Length = 218
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 81/216 (37%), Positives = 122/216 (56%), Gaps = 7/216 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+ADF+ L +I + A +H DVMDG FVPNIS G V++SLR+ +D
Sbjct: 2 IKIAPSLLSADFANLQRDIERVPN--ADWLHVDVMDGMFVPNISIGVPVVKSLRACTDKF 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + +I+ A AG D+++ H E+ P I R+L + G K G+ + P T
Sbjct: 60 LDVHLMIEKPERYIDAFAKAGADLLSVHLEADLPPAIHRALDRMEENGVKKGIVLRPITG 119
Query: 123 VAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
+ + +D+IL+MTV PGFGGQ + +PKI + I + LEVDGG+
Sbjct: 120 AEAVIPYLKRGLDLILVMTVEPGFGGQAFMSDMLPKIEAIRGYINQYCPDCDLEVDGGID 179
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+++AGA++LV GS+ F + + + L
Sbjct: 180 PATAPLVMKAGANVLVAGSAVFGKPDPAAAVEALRS 215
>gi|124516656|gb|EAY58164.1| Ribulose-phosphate 3-epimerase [Leptospirillum rubarum]
Length = 231
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 130/216 (60%), Gaps = 3/216 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PS+LA DF+RLGEE+ I+ +GA IH DVMDG FVPN++FG VI ++R YS
Sbjct: 7 EKGILIAPSLLAGDFARLGEEVKQISHSGADLIHLDVMDGDFVPNLTFGPGVIEAIRPYS 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM+ D+++ + AG D + H ES H+ R L I MG GVA+NP +
Sbjct: 67 SIPLEAHLMVWHPDTYLEELKQAGVDRVIVHQESDVHLNRLLHQIRQMGFSPGVALNPSS 126
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGV 178
P +LEDV+D +D++L+MTVNPGFGGQ + S KI + + R S +EVDGG+
Sbjct: 127 PANLLEDVLDLVDLVLVMTVNPGFGGQAFLSSMREKIAKVAKMRENRSGLSFRIEVDGGI 186
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + +V AGAD+LV G++ F RL
Sbjct: 187 SPATAEEVVDAGADILVAGTAVFRNPPYTDAVHRLR 222
>gi|330444598|ref|YP_004377584.1| ribulose-phosphate 3-epimerase [Chlamydophila pecorum E58]
gi|328807708|gb|AEB41881.1| ribulose-phosphate 3-epimerase [Chlamydophila pecorum E58]
Length = 230
Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSI+ AD S LG+E+ + +AGA IH DVMDG FVPNI+FG +I ++ +D
Sbjct: 12 IEVAPSIMGADLSCLGKEVKRVEEAGADLIHIDVMDGHFVPNITFGPGIIAAINRSTDLF 71
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ H M+ + I AG D I H E+S +I+ L I G + G+A +PET +
Sbjct: 72 LEVHAMVYNPFDFIEDFVRAGADRIIVHFEASENIKELLSYIKKCGVQAGLAFSPETSME 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+ + D++L+M+V+PGF GQ IE T KI + +I + + +EVDGG+ R
Sbjct: 132 FIPSFLPYCDVVLLMSVSPGFCGQGFIEETTEKIAFTRHVIERLGLKECLVEVDGGIDPR 191
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ K +AG D+LV S F+ + + +++ ++
Sbjct: 192 SAKLCREAGVDILVAASYLFDSQTTETLGSKISLIR 227
>gi|222085738|ref|YP_002544268.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
gi|221723186|gb|ACM26342.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
Length = 221
Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 6/222 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P +I PSILA + +RL EE S +AG IHFDVMD FVPN+SFGA +++SLR
Sbjct: 1 MKPDNRIAPSILACNLARLAEECSAAIRAGGDLIHFDVMDNRFVPNLSFGAPLLKSLRED 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLM D I +AG + IT H E++PH+ RSL I +G G+A+N
Sbjct: 61 GFDGYVDVHLMTYEADGLIESFVEAGANSITIHYEATPHVHRSLNRIRELGCDVGLAVNI 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGG 177
TP+ L + D +DM+L+MT+NPGFGGQ LI + +PKI A++L + ++VDGG
Sbjct: 121 STPLDFLPYLKDRLDMLLVMTINPGFGGQALIPAALPKIEMARSLFEADRLSTHIQVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
V NI+++ AGAD VVGS FF+ YA+R+ +
Sbjct: 181 VKLSNIRTIADAGADTFVVGSDFFSADD---YAERVAQFRAQ 219
>gi|254419613|ref|ZP_05033337.1| ribulose-phosphate 3-epimerase [Brevundimonas sp. BAL3]
gi|196185790|gb|EDX80766.1| ribulose-phosphate 3-epimerase [Brevundimonas sp. BAL3]
Length = 247
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 104/215 (48%), Positives = 145/215 (67%), Gaps = 6/215 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSILA+DF+RLGEE+ + AGA IH DVMDG FVPNI+ G D+++++R +
Sbjct: 27 MALTPLICPSILASDFARLGEEVRALEAAGADWIHVDVMDGHFVPNITLGPDIVKAIRPH 86
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLM++ +D + DAG D++T HPES PH+ R+L I +G K GV NP
Sbjct: 87 TSLPFDVHLMVAPVDPWLEAYRDAGADLLTVHPESGPHLHRTLARIRQLGAKAGVVFNPA 146
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TP++ILE+V+D +D++LIM+VNPGFGGQ+ I+S++ KI A+A++ + L+VDGGV
Sbjct: 147 TPLSILEEVVDLVDLVLIMSVNPGFGGQKFIDSSLRKIAGARAILDRAGSTAHLQVDGGV 206
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
TS N + V AGAD LV GS F YA +
Sbjct: 207 TSANAAACVAAGADALVAGSFVFKG----DYATNI 237
>gi|195383236|ref|XP_002050332.1| GJ20270 [Drosophila virilis]
gi|194145129|gb|EDW61525.1| GJ20270 [Drosophila virilis]
Length = 221
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 121/222 (54%), Gaps = 3/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL AD + L E + GA +H DVMDG FVPN++FG +++ LR+
Sbjct: 1 MPIQAKIGPSILNADLANLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKCLRNN 60
Query: 61 SD-SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ F+ H+M+ + + I +ADAG ++ TFH E + + R I G K G+AI P
Sbjct: 61 IKEAFFETHMMVQNPEQWIAPMADAGVNLYTFHVEPVDDVSKVSRLIQEAGMKVGLAIKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V +E ID D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV
Sbjct: 121 GTKVQEIEKYIDVADLVLVMTVEPGFGGQSFMADMMPKVEWLRT--NYPNLDIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ I +AGA+ +V G++ + + D+ K L
Sbjct: 179 PKTIDCCAKAGANWIVSGTAVVGAADQRQVIGDMRDVVKRYL 220
>gi|167746313|ref|ZP_02418440.1| hypothetical protein ANACAC_01022 [Anaerostipes caccae DSM 14662]
gi|167654306|gb|EDR98435.1| hypothetical protein ANACAC_01022 [Anaerostipes caccae DSM 14662]
Length = 221
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 131/217 (60%), Gaps = 5/217 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I++ PS+ AAD L +I + ++ + +H DVMDG FV ++FGAD IR+L+S +D
Sbjct: 8 RKIKLSPSVFAADLGELKNQIKELEESNVELLHVDVMDGHFVERMAFGADHIRALKSMTD 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + HI+ IA+AG DIIT H ES+ + L I G + G+ ++P TP
Sbjct: 68 IPLDVHLMIECPEVHIDSIAEAGADIITIHQESTARVLSCLHKIRNRGIRAGIVLSPGTP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
++ ++D++DMIL+M+VNPG GGQ + ST+ KIR +A+IG R I LEVDG +
Sbjct: 128 EETIKYLLDDVDMILLMSVNPGEGGQHFLNSTVEKIRNVRAMIGDRDIDLEVDGSIDHET 187
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
IK +AGA++ V G F + + L+K+
Sbjct: 188 IKPCYEAGANVFVSGGYLFK-----NIKENTEALRKA 219
>gi|157126418|ref|XP_001660886.1| ribulose-5-phosphate-3-epimerase [Aedes aegypti]
gi|108873289|gb|EAT37514.1| ribulose-5-phosphate-3-epimerase [Aedes aegypti]
Length = 224
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
S +I PSIL AD S+L EE + GA +H DVMDG FVPN++FG V++ LR D
Sbjct: 5 SAKIGPSILNADLSQLHEESQRLLDNGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIKD 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPET 121
+ F+ H+M+ + I +ADAG + TFH E + R + G K G+AI P T
Sbjct: 65 AFFETHMMVQAPQQWIEPMADAGVNQYTFHIEPVMDSVVDICRKVQEAGMKVGLAIKPGT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +++ I DMILIMTV PGFGGQ+ + +PK+ + ++ +EVDGGV
Sbjct: 125 PVETVKEFIPLADMILIMTVEPGFGGQKFMNDMMPKVHWLRE--NYPNLDIEVDGGVGPG 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I + +AGA+++V G++ + + ++L + A+
Sbjct: 183 TIDACAKAGANMIVAGTAIIRADDQAAVIRQLKHSVECAI 222
>gi|300934516|ref|ZP_07149772.1| ribulose-phosphate 3-epimerase [Corynebacterium resistens DSM
45100]
Length = 223
Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 112/220 (50%), Gaps = 8/220 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSILAADFSRLG E+ + + A IH DVMDG FVPN+SFG V +S+
Sbjct: 1 MPQKTIIAPSILAADFSRLGHEVRTV--SNADWIHIDVMDGHFVPNLSFGLPVAQSIVGL 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR---TIHAMGKKTGVAI 117
+D D HLMI A D +TFH E+ + ++ T+ A G GVAI
Sbjct: 59 TDKHLDVHLMIEDPARWAPGYA-LDFDSVTFHLEAVESVEAAVELAATLRAEGTLAGVAI 117
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P T V L + + + D++L+M+V PGFGGQ+ + + K+R + I + +E+D
Sbjct: 118 KPGTSVEPLLEHLSDFDIVLVMSVEPGFGGQKFMPEVLDKVRALRERIDSEGLHTIIEID 177
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ AG D V GSS F + + +
Sbjct: 178 GGIGPETASESAAAGVDAYVAGSSVFGKPDPVERITAIRS 217
>gi|332654894|ref|ZP_08420636.1| ribulose-phosphate 3-epimerase [Ruminococcaceae bacterium D16]
gi|332516237|gb|EGJ45845.1| ribulose-phosphate 3-epimerase [Ruminococcaceae bacterium D16]
Length = 214
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 8/215 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADF L +I ++ A +H DVMDGCFVPNI+ G V++S+R +D
Sbjct: 2 IKIAPSILSADFVNLERDIKKVSS--ADYLHVDVMDGCFVPNITIGVPVVKSIRKCTDMF 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIH---AMGKKTGVAINPET 121
D HLMI +I A AG D+++ H E+ H R + G K VA+ P T
Sbjct: 60 LDVHLMIDKPLRYIEDFAKAGADLLSIHLEA-DHPTRIAEALKVMGQCGVKKAVALRPIT 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVT 179
+ I+E+DM+L+MTV PGFGGQ +ES + IRQ +A+I K + LEVDGG+
Sbjct: 119 SANAILPYIEELDMVLVMTVEPGFGGQAFMESQLDTIRQVRAIIDKYNPACELEVDGGIA 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +V+AGA++LV GS+ + ++ + L
Sbjct: 179 PKTAPLVVEAGANVLVAGSAVYGKEDIPAAIAALR 213
>gi|146281136|ref|YP_001171289.1| ribulose-phosphate 3-epimerase [Pseudomonas stutzeri A1501]
gi|145569341|gb|ABP78447.1| ribulose-phosphate 3-epimerase [Pseudomonas stutzeri A1501]
Length = 203
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 87/196 (44%), Positives = 124/196 (63%), Gaps = 3/196 (1%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINII 81
+ N+ AGA +HFDVMD +VPN++ G V +LR + + D HLM+ +D I
Sbjct: 1 MDNVLAAGADIVHFDVMDNHYVPNLTIGPMVCSALRKHGVTAPIDVHLMVKPVDRMIGDF 60
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV 141
+AG ITFHPE+S HI RSL+ I G G+ NP TP+ +L+ V+D++DM+L+M+V
Sbjct: 61 LEAGATYITFHPEASEHIDRSLQLIKDGGAMAGLVFNPATPLDVLKYVMDKVDMVLLMSV 120
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
NPGFGGQ+ I T+ K+R+A+ALI R I LE+DGGV +NI+ + AGAD V GS+
Sbjct: 121 NPGFGGQKFIPGTLDKLREARALIDASGREIRLEIDGGVNPKNIREIAAAGADTFVAGSA 180
Query: 200 FFNQKGEISYAKRLND 215
FNQ + ++
Sbjct: 181 IFNQPDYKAVIDQMRA 196
>gi|109948242|ref|YP_665470.1| ribulose-phosphate 3-epimerase [Helicobacter acinonychis str.
Sheeba]
gi|109715463|emb|CAK00471.1| ribulose-phosphate 3-epimerase [Helicobacter acinonychis str.
Sheeba]
Length = 217
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 73/217 (33%), Positives = 125/217 (57%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +E+ +++ A +H DVMDG +VPN++ G ++ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKELESVSS--ADFLHVDVMDGHYVPNLTMGPVILENVTRMSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A +II+ H E+ H R L+ I ++G G+ +NP T
Sbjct: 59 LDVHLMVENASFFVELFAPLKPEIISIHAENEKHPHRVLQLIKSLGITPGIVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SVKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDQN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I L QA D++V GS F K + L + KS
Sbjct: 179 IFELQQADVDIVVSGSYIFKSKDRKLAIEGLQNANKS 215
>gi|300784677|ref|YP_003764968.1| ribulose-phosphate 3-epimerase [Amycolatopsis mediterranei U32]
gi|299794191|gb|ADJ44566.1| ribulose-phosphate 3-epimerase [Amycolatopsis mediterranei U32]
Length = 223
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 79/222 (35%), Positives = 115/222 (51%), Gaps = 5/222 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAG---AKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSILAADF+RLGEEI+ + G A +H DVMD FVPN++ G V ++L +D
Sbjct: 1 MIAPSILAADFARLGEEIAAVAAGGETRADWVHVDVMDAHFVPNLTLGLPVAKALIDSTD 60
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLMI D A+AG +T H E++ + + A G K G+++ P T
Sbjct: 61 LPIDCHLMIDDPDRWAIGYAEAGAYNVTVHAEAAKDPVALAKNLRAAGAKAGLSLKPGTA 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ D + D +L+M+V PGFGGQ I + K+R A+ L+ + L E+DGG+ +
Sbjct: 121 LEPWLDALKHYDTLLVMSVEPGFGGQSFIADVLEKVRTARRLVDTGHLKLIVEIDGGINA 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I+ +AG D V GS+ + L + A
Sbjct: 181 DTIEQAAEAGVDCFVAGSAVYGAADPGKAVAALREQAARGRA 222
>gi|212695661|ref|ZP_03303789.1| hypothetical protein ANHYDRO_00178 [Anaerococcus hydrogenalis DSM
7454]
gi|212677334|gb|EEB36941.1| hypothetical protein ANHYDRO_00178 [Anaerococcus hydrogenalis DSM
7454]
Length = 220
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 130/203 (64%), Gaps = 2/203 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+A+F+ L ++ + K K +H D+MDG FVPNISFG +I+++R +D +
Sbjct: 2 VEISPSVLSANFANLQNDLDQLKKTKVKYLHLDIMDGKFVPNISFGFPIIKAIREDNDFI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I+ +G D+IT H E+ ++ ++ I G K G++ P+T +
Sbjct: 62 FDTHLMIDEPIRYIDQFKKSGADLITVHYEACSNLDETIEKIKDSGLKVGLSFKPKTDIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +++ID+ L+M+V PGFGGQ I+++I KI++ ++ I ++S +EVDGG+ N
Sbjct: 122 KIIPYLEKIDLCLVMSVEPGFGGQSFIKNSIGKIQKLRSYIDDNNLSCLIEVDGGIKDHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKG 205
+K ++ AG D++V GS F+ K
Sbjct: 182 LKKVIDAGVDVVVSGSDIFSHKE 204
>gi|254497946|ref|ZP_05110710.1| D-ribulose-5-phosphate-3-epimerase [Legionella drancourtii LLAP12]
gi|254352840|gb|EET11611.1| D-ribulose-5-phosphate-3-epimerase [Legionella drancourtii LLAP12]
Length = 217
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 133/217 (61%), Gaps = 6/217 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSYSD 62
+ QI+PS+L+AD + LG+E+ + AGA IHFDVMD +VPN++FG + ++ +
Sbjct: 2 TYQILPSMLSADLTCLGDEVGAVMLAGADYIHFDVMDNHYVPNLTFGPAFCAALIKRFPQ 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +D+ I A AG I+ HP+++ H+ RSL+ I +G TG+ +NP T
Sbjct: 62 LPIDVHLMVKPVDALIESFAKAGAKRISIHPDATIHLDRSLQLIKDLGCATGLVLNPATS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ +L ++D +L+MTVNPGFGGQ+LI I KI Q + + + L VDGGVTS+N
Sbjct: 122 IDVLTWCAYKLDFVLVMTVNPGFGGQKLIPEIIEKITQIRQRYPQ--LDLCVDGGVTSKN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I +L AGA+ V GS+ FN Y + +N ++
Sbjct: 180 IATLAHAGANQFVAGSAIFNSNN---YQETINTMRAQ 213
>gi|167757021|ref|ZP_02429148.1| hypothetical protein CLORAM_02570 [Clostridium ramosum DSM 1402]
gi|237735909|ref|ZP_04566390.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|167703196|gb|EDS17775.1| hypothetical protein CLORAM_02570 [Clostridium ramosum DSM 1402]
gi|229381654|gb|EEO31745.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 213
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 123/217 (56%), Gaps = 9/217 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+A+F+ L EEI+ I A IH+DVMDG FVPNISFG +++ + +D
Sbjct: 2 VKVAPSLLSANFAYLKEEINAIKA--ADWIHYDVMDGHFVPNISFGYSILKDVSKVTDMY 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI+ +++ ++ +I FH E + I + I + G++I P+TP
Sbjct: 60 LDVHLMITDPAKYVDNFINSNASLIVFHYEAVAEDKINELIAHIKEHDVEVGLSIKPDTP 119
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V +L+ ++E+D++L+M+V PGFGGQ+ + + KI Q L + + +EVDGG+
Sbjct: 120 VEVLKPFLNELDVVLVMSVEPGFGGQKFNSAAVDKIAQLATLRKENNYHYLIEVDGGINE 179
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K AG D+LV GS F Y K + LK
Sbjct: 180 STSKLCNDAGVDVLVAGSYVFGSDD---YTKAIESLK 213
>gi|323452309|gb|EGB08183.1| hypothetical protein AURANDRAFT_59005 [Aureococcus anophagefferens]
Length = 234
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 8/218 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PS+LA D S + E + +AGA +H DVMDG FVPN+S+G V++ LR + +
Sbjct: 2 PAKIAPSLLACDLSDMAGEARRVVEAGADVLHIDVMDGHFVPNLSWGPPVVKCLRKATRA 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG--KKTGVAINPET 121
D HLM+S + +ADAG D TFH E+ + I A GVA+ P T
Sbjct: 62 FLDVHLMVSDPRKWVLPMADAGADGFTFHVEADSDPAAVVDAIRAAPRKMVVGVALKPGT 121
Query: 122 PVAILEDVIDE----IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P+A L+ + + D +L+MTV PGFGGQ + + + K+ +A ++ ++VDGG
Sbjct: 122 PIAALDALWRDGEFLADFVLVMTVEPGFGGQSFMPAMMDKVTALRAQF--PTMDIQVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +++ AGA+ +V GS+ F + + +L D
Sbjct: 180 LGPATVETAAAAGANYIVAGSAVFKAREPAAVIAQLRD 217
>gi|270157776|ref|ZP_06186433.1| ribulose-phosphate 3-epimerase [Legionella longbeachae D-4968]
gi|269989801|gb|EEZ96055.1| ribulose-phosphate 3-epimerase [Legionella longbeachae D-4968]
Length = 228
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 3/214 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSY 60
T + I+PSIL+AD + LG E+ ++ KAGA IHFDVMD +VPN++FG + ++ +
Sbjct: 11 TMTYHILPSILSADLTCLGAEVDSVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIQRF 70
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLMI +D+ I A AG I+ HP+++ H+ RSL I +G + G+ +NP
Sbjct: 71 PQLPIDVHLMIEPVDALIESFAKAGAKRISIHPDATIHLDRSLNLIKDLGCEAGLVLNPA 130
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ +L ++D +LIMTVNPGFGGQ+LI I KI Q + + + L VDGGVT+
Sbjct: 131 TPIEVLTWCAHKLDFVLIMTVNPGFGGQKLIPEIINKIPQIRERYPQ--LDLCVDGGVTT 188
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
NI +L +AGA+ V GS+ F +
Sbjct: 189 DNIATLARAGANQFVAGSAVFKSANYKDTISAMR 222
>gi|322827788|gb|EFZ31800.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 244
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 133/223 (59%), Gaps = 8/223 (3%)
Query: 6 QIVPSILAADFSRLGEEISNIT--KAGA-KQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PSILA+DF+RL +E ++ + GA + +H DVMDG FVPNIS G V+ +LR +
Sbjct: 22 IIAPSILASDFARLLDECKDVLSVEGGASEWLHVDVMDGHFVPNISIGMCVVEALRKHLQ 81
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D H M+S D ++ +A AG +TFH E++ + R I A G + GVA+ P+T
Sbjct: 82 HTFLDVHCMVSHPDRWVDEMAKAGASQMTFHVEAAECPKAVARHIRAAGMQCGVALKPKT 141
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P + + ++I+E +DM+L+MTV PGFGGQ + +PK+ + + ++++VDGG+
Sbjct: 142 PASAVTELIEEKLVDMVLVMTVEPGFGGQSFMHDMMPKVAELRR--AYPHLNIQVDGGLG 199
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I + +AGA+++V G+S F + + + K +L
Sbjct: 200 EKTIDAAAEAGANIIVAGTSIFKAAVRKQATETMRNAVKKSLT 242
>gi|325849049|ref|ZP_08170541.1| ribulose-phosphate 3-epimerase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480294|gb|EGC83357.1| ribulose-phosphate 3-epimerase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 220
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 129/203 (63%), Gaps = 2/203 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS+L+A+FS L ++ + K K +H D+MDG FVPNISFG +I+S+R +D +
Sbjct: 2 VEISPSVLSANFSNLQNDLDQLKKTKVKYLHLDIMDGKFVPNISFGFPIIKSIREDNDFI 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I+ +G D+IT H E+ ++ ++ I G K G++ P+T +
Sbjct: 62 FDTHLMIDEPIRYIDQFKKSGADLITVHYEACSNLDETIEKIKNSGLKVGLSFKPKTDIE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +++ID+ L+M+V PGFGGQ IE +I KI++ ++ I ++S +EVDGG+ N
Sbjct: 122 KIIPYLEKIDLCLVMSVEPGFGGQSFIEDSIGKIQKLRSYIDDNNLSCLIEVDGGIKDHN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKG 205
+K ++ AG D++V GS F+ K
Sbjct: 182 LKKVIDAGVDVVVSGSDIFSHKE 204
>gi|302695085|ref|XP_003037221.1| hypothetical protein SCHCODRAFT_49694 [Schizophyllum commune H4-8]
gi|300110918|gb|EFJ02319.1| hypothetical protein SCHCODRAFT_49694 [Schizophyllum commune H4-8]
Length = 230
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 127/223 (56%), Gaps = 4/223 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-Y 60
P I PS+LA+DF +L E + K GA+ +H DVMDG FVPNI+ GA ++ ++
Sbjct: 1 MPRAIISPSVLASDFGQLTAECQRMIKGGAEWLHMDVMDGHFVPNITMGAPILACVKKGI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D DCH+M+S+ + ++ IADAG + FH E++P + IH G K G+AI+P+
Sbjct: 61 PDIFMDCHMMVSNPEKWVDDIADAGGALYCFHLEAAPEPLPIIEHIHKRGMKAGLAISPD 120
Query: 121 TPVAIL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP + + +++ + DM+L+MTV PG GGQ IE +PK+ + + + +EVDGGV
Sbjct: 121 TPASAITDEMANAADMLLVMTVYPGRGGQSFIERCVPKVEELRKRYPNK--DIEVDGGVG 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I AG++++V G++ F L +A A
Sbjct: 179 PKTIDKCAHAGSNVIVAGTAIFGAPDPEGVITVLKATVNAAQA 221
>gi|17552948|ref|NP_498620.1| hypothetical protein F08F8.7 [Caenorhabditis elegans]
gi|14574055|gb|AAK68310.1|U28991_8 Hypothetical protein F08F8.7 [Caenorhabditis elegans]
Length = 227
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 124/227 (54%), Gaps = 7/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + PSIL AD + L E + AGA +H DVMDG FVPN++FG V+ SLR
Sbjct: 1 MTLRPFVCPSILNADLASLASECKKLLAAGADWLHLDVMDGHFVPNLTFGHPVVESLRKS 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP---HIRRSLRTIHAMGKKTGV 115
++ FD HLM+S+ + +A AG TFH E+ + + I G K G+
Sbjct: 61 LGAEPFFDVHLMVSNPGQWVEPMAKAGASQFTFHYEAVDGDVAVSELIEKIRKSGMKVGL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
++ P T V + + +D LIMTV PGFGGQ+ +E+ + K+R ++ +++++VD
Sbjct: 121 SVKPGTSVEHILKHANHLDNALIMTVEPGFGGQKFMENMMEKVRTIRS--KYPNLTIQVD 178
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
GGVT NI+ QAGA+ +V G+ + + + ++A++
Sbjct: 179 GGVTPENIEISAQAGANAIVSGTGIIKAADQSVAMTTIRNAVEAAIS 225
>gi|71421279|ref|XP_811755.1| ribulose-5-phosphate 3-epimerase [Trypanosoma cruzi strain CL
Brener]
gi|70876456|gb|EAN89904.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 244
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 133/223 (59%), Gaps = 8/223 (3%)
Query: 6 QIVPSILAADFSRLGEEISNIT--KAGA-KQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PSILA+DF+RL +E ++ + GA + +H DVMDG FVPNIS G V+ +LR +
Sbjct: 22 IIAPSILASDFARLLDECKDVLSVEGGASEWLHVDVMDGHFVPNISIGMCVVEALRKHLQ 81
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D H M+S D ++ +A AG +TFH E++ + R I A G + GVA+ P+T
Sbjct: 82 HTFLDVHCMVSHPDRWVDEMAKAGASQMTFHVEAAECPKAVARHIRAAGMQCGVALKPKT 141
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P + + ++I+E +DM+L+MTV PGFGGQ + +PK+ + + ++++VDGG+
Sbjct: 142 PASAVTELIEEKLVDMVLVMTVEPGFGGQSFMHDMMPKVAELRR--AYPHLNIQVDGGLG 199
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I + +AGA+++V G+S F + + + K +L
Sbjct: 200 EKTIDAAAEAGANIIVAGTSIFKAAVRKQATETMRNAVKKSLT 242
>gi|160903337|ref|YP_001568918.1| ribulose-phosphate 3-epimerase [Petrotoga mobilis SJ95]
gi|160360981|gb|ABX32595.1| Ribulose-phosphate 3-epimerase [Petrotoga mobilis SJ95]
Length = 219
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 136/219 (62%), Gaps = 8/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I+I PSILAADF L +E+ ++K A IH D+MDG FVPNI+FG ++ S+R D
Sbjct: 2 IKIYPSILAADFLNLAQEVEKVSK-DADGIHLDIMDGVFVPNITFGFPIVESIRKKFKDI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI D ++ + + + IT H E+ H+ R++ I +G + GV +NP TPV
Sbjct: 61 YLDAHLMIVEPDKYLENFSKS-VNSITVHYEAVTHLHRTVLKIKELGCEAGVTLNPHTPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
++LE+++ +D +LIM+VNPGF GQ IE+T K+R+ + L ++ ++ + VDGGV +
Sbjct: 120 SLLEEILPYVDKVLIMSVNPGFTGQHFIETTYEKVRKLRRLSDEKGLNVEIMVDGGVNKQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI L Q+G + ++G+S F + + + +LKK A
Sbjct: 180 NIGLLHQSGVNTFIIGASVFYSENPS---QEIIELKKVA 215
>gi|206603584|gb|EDZ40064.1| Ribulose-phosphate 3-epimerase [Leptospirillum sp. Group II '5-way
CG']
Length = 231
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 138/222 (62%), Gaps = 6/222 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I I PS+LA DF+RLGEE+ I+++GA IH D+MDG FVPN++FG VI ++R +S+
Sbjct: 8 KGILIAPSLLAGDFARLGEEVKQISESGADLIHLDIMDGDFVPNLTFGPGVIEAIRPFSN 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ HLM+ D+++ + AG D + H ES H+ R L I MG GVA+NP TP
Sbjct: 68 IPLEAHLMVWHPDTYLEELKQAGVDRVIVHQESDVHLNRLLHKIRQMGFSPGVALNPSTP 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGGVT 179
+LEDV+D +D++L+MTVNPGFGGQ + S KI + + KR S +EVDGG++
Sbjct: 128 ANLLEDVLDLVDLVLVMTVNPGFGGQAFLSSMREKIARVAMMREKRSGLSFRIEVDGGIS 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +V AGAD LV G++ F Y +N L+ +AL
Sbjct: 188 PVTAQEVVGAGADTLVAGTAIFRTP---PYKDAVNRLRMAAL 226
>gi|294054695|ref|YP_003548353.1| ribulose-phosphate 3-epimerase [Coraliomargarita akajimensis DSM
45221]
gi|293614028|gb|ADE54183.1| ribulose-phosphate 3-epimerase [Coraliomargarita akajimensis DSM
45221]
Length = 217
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 2/214 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PSILA D + L + I AG + +H D+MDG FVPN++FG I+++R +D
Sbjct: 3 KIVLAPSILAGDHADLRSSLREIEAAGLEWVHLDIMDGHFVPNLTFGPQTIKAMREGTDL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLM+ + I+ DAG D IT H E + +L I + G K GV +NP+T
Sbjct: 63 FFDVHLMLDNPHQFIDAFIDAGADQITIHVEPDYPVSDTLEAIKSKGVKCGVVLNPDTEA 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ ++ D++L+MTV PGFGGQ E +PK+ + ++ LEVDGGV
Sbjct: 123 EAAKPYLELCDIVLLMTVQPGFGGQSFREDVLPKMETFANWRQELGLNYRLEVDGGVDLN 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + G D LV G++FF + I +A +
Sbjct: 183 TATACTERGVDTLVAGTAFFKAEDRIQFANTVTK 216
>gi|325534035|pdb|3QC3|A Chain A, Crystal Structure Of A D-Ribulose-5-Phosphate-3-Epimerase
(Np_954699) From Homo Sapiens At 2.20 A Resolution
gi|325534036|pdb|3QC3|B Chain B, Crystal Structure Of A D-Ribulose-5-Phosphate-3-Epimerase
(Np_954699) From Homo Sapiens At 2.20 A Resolution
Length = 225
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+I PSIL +D + LG E +GA +H DV DG FVPNI+FG V+ SLR
Sbjct: 3 ASGCKIGPSILNSDLANLGAECLRXLDSGADYLHLDVXDGHFVPNITFGHPVVESLRKQL 62
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D FD H +S + + A AG + TFH E++ + ++ I G K G+AI P
Sbjct: 63 GQDPFFDXHXXVSKPEQWVKPXAVAGANQYTFHLEATENPGALIKDIRENGXKVGLAIKP 122
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V L ++ID L+ TV PGFGGQ+ E PK+ + S+ +EVDGGV
Sbjct: 123 GTSVEYLAPWANQIDXALVXTVEPGFGGQKFXEDXXPKVHWLRTQF--PSLDIEVDGGVG 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+ +V GS+ + S L +
Sbjct: 181 PDTVHKCAEAGANXIVSGSAIXRSEDPRSVINLLRN 216
>gi|332298361|ref|YP_004440283.1| ribulose-phosphate 3-epimerase [Treponema brennaborense DSM 12168]
gi|332181464|gb|AEE17152.1| ribulose-phosphate 3-epimerase [Treponema brennaborense DSM 12168]
Length = 210
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 128/204 (62%), Gaps = 2/204 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + PS+L+ADF L + I + GA +H DVMDG FVP IS+G V+ +LR ++
Sbjct: 1 MKTPLLAPSLLSADFLHLDSALKRIEQGGASFVHIDVMDGRFVPQISYGQPVVSALRPHT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ FD HLMI ++HI+ AG D +TFH E++ H R + IH GKK G+A+ P T
Sbjct: 61 ELPFDVHLMIEQPENHIDSFIRAGADYLTFHWENTVHHHRIIGRIHDAGKKAGIAVVPST 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
P+A+LE+++ +D++L+MTVNPGFGGQ I KI + + + +R + DGG+
Sbjct: 121 PIAVLEEILPYLDLVLVMTVNPGFGGQAFIPGCARKITELRRIKAERGYGFLISADGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQ 203
+ + +++ AG D++V GS+FF+
Sbjct: 181 GQTLAAVLDAGTDVVVSGSAFFSG 204
>gi|217967816|ref|YP_002353322.1| Ribulose-phosphate 3-epimerase [Dictyoglomus turgidum DSM 6724]
gi|217336915|gb|ACK42708.1| Ribulose-phosphate 3-epimerase [Dictyoglomus turgidum DSM 6724]
Length = 220
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 67/216 (31%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I++ PS+L+AD + I + + +H D+MDG FVPN+S+G ++++LR+
Sbjct: 2 EIKVYPSLLSADLLNMERSIEIVKDL-SDALHVDIMDGHFVPNLSYGPSLVKALRNRYSI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM+ ++ +++ +AG + FH E++ H +R L+ I + + +NP TP+
Sbjct: 61 PLNVHLMVEKPENFVDMFIEAGASHLGFHVEATHHPQRLLKYIRDHNIRPFITLNPATPL 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+E ++ E+DM+LIMTVNPG+GGQ+ + ++ KI+ + + K I + VDGG+
Sbjct: 121 NTIEYLLGELDMVLIMTVNPGYGGQEFLHFSLKKIKSLREMAVKEGINLDIMVDGGIDLH 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+++AGA++L+ G+S FN + ++ ++
Sbjct: 181 TAPLVIEAGANVLISGNSIFNSENPREVIIKMKSIR 216
>gi|289163956|ref|YP_003454094.1| ribulose-phosphate 3-epimerase [Legionella longbeachae NSW150]
gi|288857129|emb|CBJ10945.1| ribulose-phosphate 3-epimerase [Legionella longbeachae NSW150]
Length = 217
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 126/209 (60%), Gaps = 3/209 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSYSDSVF 65
I+PSIL+AD + LG E+ ++ KAGA IHFDVMD +VPN++FG + ++ +
Sbjct: 5 ILPSILSADLTCLGAEVDSVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIQRFPQLPI 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI +D+ I A AG I+ HP+++ H+ RSL I +G + G+ +NP TP+ +
Sbjct: 65 DVHLMIEPVDALIESFAKAGAKRISIHPDATIHLDRSLNLIKDLGCEAGLVLNPATPIEV 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L ++D +LIMTVNPGFGGQ+LI I KI Q + + + L VDGGVT+ NI +
Sbjct: 125 LTWCAHKLDFVLIMTVNPGFGGQKLIPEIINKIPQIRERYPQ--LDLCVDGGVTTDNIAT 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L +AGA+ V GS+ F +
Sbjct: 183 LARAGANQFVAGSAVFKSANYKDTISAMR 211
>gi|206901657|ref|YP_002251148.1| ribulose-phosphate 3-epimerase [Dictyoglomus thermophilum H-6-12]
gi|206740760|gb|ACI19818.1| ribulose-phosphate 3-epimerase [Dictyoglomus thermophilum H-6-12]
Length = 220
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 129/215 (60%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I++ PSIL+AD + + I + A IH DVMDG FVPN+S+G ++R+LRS D
Sbjct: 2 NIKVFPSILSADLLNMEKSIELVKDL-ADAIHIDVMDGHFVPNLSYGPALVRALRSKYDI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM+ ++ +++ DAG + + FH E++ H +R L+ I G + + +NP TP+
Sbjct: 61 SLNVHLMVERPENFVDMFMDAGANHLGFHIEATYHPQRLLKYIRDHGVRPFITLNPATPL 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+E ++ E+DM+LIMTVNPG+GGQ+ + + KIR + + K I + VDGG+
Sbjct: 121 NTIEYLLGEVDMVLIMTVNPGYGGQEFLPFCLRKIRTLREMALKEGIDLDIMVDGGIDLN 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+V+AGA++L+ G++ F + ++ +
Sbjct: 181 TAPLVVEAGANILISGNTVFTSENPKEVIIKMKSI 215
>gi|332024864|gb|EGI65052.1| Ribulose-phosphate 3-epimerase [Acromyrmex echinatior]
Length = 251
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 79/239 (33%), Positives = 123/239 (51%), Gaps = 26/239 (10%)
Query: 1 MTP--SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M S +I PSIL +D +++ +E + GA +H DVMDG FVPN++FG +++ LR
Sbjct: 1 MAKNLSAKIGPSILNSDLAQIYKESQKLLDNGADYLHLDVMDGHFVPNLTFGHPIVKCLR 60
Query: 59 -SYSDSVFDCHLMISSIDS---------------------HINIIADAGCDIITFHPESS 96
D+ + H+M+S + I +A+AG D TFH E
Sbjct: 61 SKIKDAFLETHMMVSKPEQRNILSKDTLDELPLPSERRTNWIEPMAEAGVDQYTFHVEPV 120
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
+ R + G K GVA+ P TPV ++ + D DMIL+MTV PGFGGQ+ +E +
Sbjct: 121 EDVPLVCRKVKEAGMKVGVALKPGTPVDVVTNYADLADMILVMTVEPGFGGQKFMEPMLK 180
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K+ + + + +EVDGG+ I++ +AGA+++V G+S N + L D
Sbjct: 181 KVAWLRENYPE--LDIEVDGGIGLATIEACAKAGANMIVSGTSVINSADQAKVITTLRD 237
>gi|71649837|ref|XP_813630.1| ribulose-5-phosphate 3-epimerase [Trypanosoma cruzi strain CL
Brener]
gi|70878531|gb|EAN91779.1| ribulose-5-phosphate 3-epimerase, putative [Trypanosoma cruzi]
gi|159137080|gb|ABW88687.1| ribulose-phosphate 3-epimerase [Trypanosoma cruzi]
Length = 244
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 133/223 (59%), Gaps = 8/223 (3%)
Query: 6 QIVPSILAADFSRLGEEISNIT--KAGA-KQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PSILA+DF+RL +E ++ + GA + +H DVMDG FVPNIS G V+ +LR +
Sbjct: 22 IIAPSILASDFARLLDECKDVLSVEGGASEWLHVDVMDGHFVPNISIGMCVVEALRKHLQ 81
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D H M+S D ++ +A AG +TFH E++ + R I A G + GVA+ P+T
Sbjct: 82 HTFLDVHCMVSHPDRWVDEMAKAGASQMTFHVEAAECPKAVARHIRAAGMQCGVALKPKT 141
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P + + ++I+E +DM+L+MTV PGFGGQ + +PK+ + + ++++VDGG+
Sbjct: 142 PASAVTELIEEKLVDMVLVMTVEPGFGGQSFMHDMMPKVAELRR--AYPHLNIQVDGGLG 199
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ I + +AGA+++V G+S F + + + K +L
Sbjct: 200 EKTIDAAAEAGANIIVAGTSIFKAAVRRQVTETMRNAVKKSLT 242
>gi|320093627|ref|ZP_08025511.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319979415|gb|EFW10893.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 220
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 117/215 (54%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E+ I +GA H DVMD FVPN+S+G V ++ D
Sbjct: 5 ISPSILNCDIADLRGELEKI--SGADVAHVDVMDNHFVPNLSWGLPVAEAVVKTGILPVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AGC +TFH E++ R R + +G K G+ + P T +A
Sbjct: 63 AHLMIEDPDRWAPQYAEAGCQSVTFHAEAAQAPVRLARELRRIGSKVGLGLRPATDIAPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D++ E DMIL+MTV PGFGGQ +ES +PKIR+ +A + + ++VDGGV+ I+
Sbjct: 123 VDLLGEFDMILVMTVEPGFGGQSFLESMLPKIRRTRAAVNASGLEVSIQVDGGVSRSTIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGAD V GS+ F + + L L +
Sbjct: 183 LAAEAGADNFVAGSAVFRADDALEEVEVLRRLASA 217
>gi|146329629|ref|YP_001209450.1| ribulose-phosphate 3-epimerase [Dichelobacter nodosus VCS1703A]
gi|146233099|gb|ABQ14077.1| ribulose-phosphate 3-epimerase [Dichelobacter nodosus VCS1703A]
Length = 229
Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 100/224 (44%), Positives = 143/224 (63%), Gaps = 4/224 (1%)
Query: 1 MTPS-IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ + I+I PSILAAD +RLGEE++ + AGA IHFDVMD +VPN++FGA + ++LR+
Sbjct: 1 MSKTRIEISPSILAADCARLGEEVAQVLAAGADSIHFDVMDNHYVPNLTFGAPICQALRN 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
Y + D HLM +D+ IN A AG IT HPE++ H+ RSL+ I +G K G+A+N
Sbjct: 61 YGISAAIDVHLMAQPVDALINAFAQAGATSITIHPETTLHLNRSLQLIRDLGLKAGLALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDG 176
P T ++ LE V+D++D+ILIMTVNPGFGGQ + + KIR + + K I L VDG
Sbjct: 121 PATGISCLEYVLDQLDIILIMTVNPGFGGQNFLPVILDKIRAVRQKLADFKPPIRLAVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G+ + I + AGAD + GS+ F+ + ++L D A
Sbjct: 181 GINQQTIAAAAAAGADTFIAGSAIFHAPDYQNIMQQLRDTATRA 224
>gi|83770370|dbj|BAE60503.1| unnamed protein product [Aspergillus oryzae]
Length = 246
Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 85/246 (34%), Positives = 133/246 (54%), Gaps = 39/246 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG E S G+ +H D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MSPPAIIAPSILSADFASLGSECSTKMAQGSDWLHVDIMDGHFVPNITFGAPVVTKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
D FDCH+MI + +AGCD+ FH E++
Sbjct: 61 VDRPTQPHGRGTFDCHMMI------MEEFKNAGCDLYCFHYEAAVASVAATEPADSTTTR 114
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
+ +R IH G + G+AI P+TPV +L +++ + DM+L+MTV PGFGGQ+
Sbjct: 115 KTSPKELIRYIHEEGMQAGIAIKPDTPVDVLWEILESKDEKERPDMVLVMTVYPGFGGQK 174
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ + ++++EVDGG+ + +AGA+++V GS+ F +
Sbjct: 175 FMASELPKVQALRERY--PNLNIEVDGGLGLGTVDQAAEAGANVIVAGSAVFGAQDPADV 232
Query: 210 AKRLND 215
+L +
Sbjct: 233 IAKLRE 238
>gi|283779200|ref|YP_003369955.1| ribulose-phosphate 3-epimerase [Pirellula staleyi DSM 6068]
gi|283437653|gb|ADB16095.1| ribulose-phosphate 3-epimerase [Pirellula staleyi DSM 6068]
Length = 229
Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 117/212 (55%), Gaps = 1/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
++PS+L DF L E+ + +AG K +H DVMDG FVPN+++G ++ LR +D D
Sbjct: 17 VLPSLLLCDFGNLEREVRRLEEAGVKALHLDVMDGVFVPNLTYGMPIVEGLRRLTDMPLD 76
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + ++ AG D++T H E+ + L I + G+AINP TP+
Sbjct: 77 VHLMIQRPEKYLRQFHSAGADVLTVHIEAVEDAQAILGQIRDLDMGAGIAINPSTPMTRF 136
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E + D+ L+M+V GFGGQ E + ++ + + ++++ +EVDGG+ ++ I
Sbjct: 137 EAALPYADLALVMSVEAGFGGQSFHEIALERMAHVRR-VAQKNLLIEVDGGINTKTIARA 195
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AGA L VVGS+ F Q + L+ L K
Sbjct: 196 SSAGATLFVVGSAIFGQSDYGTAVSELSALAK 227
>gi|291558242|emb|CBL35359.1| ribulose-phosphate 3-epimerase [Eubacterium siraeum V10Sc8a]
Length = 215
Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I S+LA+D + + +EI A + +H DVMDG FV NI++G +V+ ++R SD F
Sbjct: 4 IISASMLASDLTNIEKEIRRTENAQVEWLHIDVMDGVFVDNITYGNNVVAAMRKVSDIYF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ I + A AG +++T H ES+ + +LR I G G+AI P T
Sbjct: 64 DTHLMVTDPTKLIPLFAKAGSNMLTIHLESNGNTEENLRAIRENGMNAGLAIKPATDWKE 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSRN 182
+ + DM+L+MTV PG+GGQ I K+ + + ++VDGG+ +
Sbjct: 124 VIPYLPLCDMVLVMTVEPGYGGQGFIPQCADKVAMLRKYCDENGFDKMNIQVDGGINTAT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ AGA++LV G+ F + + A +
Sbjct: 184 AATVKDAGANVLVAGTYLFRAEDMKTAADAIR 215
>gi|324526396|gb|ADY48666.1| Ribulose-phosphate 3-epimerase [Ascaris suum]
Length = 250
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 80/228 (35%), Positives = 120/228 (52%), Gaps = 10/228 (4%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-- 60
P I PS+L AD S L E + AGA +H DVMDG FVPN++FG VI LR
Sbjct: 5 PRAIICPSVLNADLSNLTAECKKLLNAGADYLHLDVMDGHFVPNLTFGHTVIECLRMNLG 64
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES------SPHIRRSLRTIHAMGKKTG 114
S FD HLM+++ + I + AG ++ TFH E+ I ++ I G K G
Sbjct: 65 SAPFFDVHLMVTNPEQWIQPMKKAGANLFTFHLEAAEVKDGDDAIYATIHAIKRAGMKVG 124
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
+AI P TPV L +ID LIM+V PGFGGQ+ I + + K+R+ + + +++
Sbjct: 125 IAIKPRTPVEKLLKFATQIDHALIMSVEPGFGGQKFIPAMMSKVRKLRN--AYPLLDIQI 182
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGG+ N+ AGA+++V G++ Q + + ++A +
Sbjct: 183 DGGINLTNVDQCAYAGANVIVSGTAIVTQNNQTEIISEMRRKVEAAFS 230
>gi|290997926|ref|XP_002681532.1| predicted protein [Naegleria gruberi]
gi|284095156|gb|EFC48788.1| predicted protein [Naegleria gruberi]
Length = 235
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 124/231 (53%), Gaps = 18/231 (7%)
Query: 1 MTPSIQ--IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+ +Q I PSIL+ADF+ L + + + GA +H DVMDG FV NI+ GA V++SLR
Sbjct: 1 MSQQLQAIICPSILSADFATLAADSNQMLDFGADWLHVDVMDGHFVNNITIGAPVVKSLR 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS----PHIRRSLRTIHA------ 108
++ DCHLM+S I+ +AG D ITFH ES + + I
Sbjct: 61 KHTKGFLDCHLMVSHPSKWIHDFIEAGADNITFHYESENGDLESTLKVMNLIKEENEKQG 120
Query: 109 MGKKTGVAINPETPVAILEDVIDE----IDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
KT + I P+TPV +L ++D I MILIM+V PGFGGQ + + K++ +
Sbjct: 121 KQCKTSITIKPKTPVDVLFPILDNHTESIYMILIMSVEPGFGGQSFMADQMEKVKILRE- 179
Query: 165 IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++++VDGGVT I +AGA+++V GS+ F K + +
Sbjct: 180 -KYPHLNIQVDGGVTETTIVPAAEAGANVVVSGSAIFKSPQPQQTIKVMRE 229
>gi|117928483|ref|YP_873034.1| ribulose-5-phosphate 3-epimerase [Acidothermus cellulolyticus 11B]
gi|117648946|gb|ABK53048.1| ribulose-5-phosphate 3-epimerase [Acidothermus cellulolyticus 11B]
Length = 229
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 127/218 (58%), Gaps = 3/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+QI PS+L+ADF+RL + + A +H DVMD FVPN++ G V+ +L +
Sbjct: 3 VQIAPSLLSADFARLAD-EAAAVAEVADWLHVDVMDNHFVPNLTVGRPVVEALHKATTLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI + D A+AG +TFH E++ + ++ R I A G + G+A+ P TPV
Sbjct: 62 LDCHLMIENPDRWAVGYAEAGAANVTFHAEAAADVVQTARAIRAAGARAGLAVKPATPVD 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
DV+ E DM+L+MTV PGFGGQQ + +PK+ +A+ + ++ ++VDGGV+
Sbjct: 122 GYFDVLSEFDMLLVMTVEPGFGGQQFLPEMLPKVAKARRFLRDSGLNLWIQVDGGVSLET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I++ V+AGAD+ V G++ + + L +A
Sbjct: 182 IEACVEAGADVFVAGTAVYGTDDPARAVEALRSRAGAA 219
>gi|217077907|ref|YP_002335625.1| rpe ribulose-phosphate 3-epimerase [Thermosipho africanus TCF52B]
gi|217037762|gb|ACJ76284.1| rpe ribulose-phosphate 3-epimerase [Thermosipho africanus TCF52B]
Length = 213
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SILAA+ S L EI + K +IHFD MDG FVPN++FG +I ++++ ++
Sbjct: 2 VKLSGSILAANLSNLESEIKRVEK-FIDEIHFDTMDGHFVPNLTFGYPLIEAVKNCTNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+++ + H+ + + IT H E++ HI R + I G + VA+NP TP+
Sbjct: 61 IDVHLMVTNPEFHVEKLKEFDIQRITVHLETTYHIHRLISRIKEYGFEAFVALNPGTPLY 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++E++I +D +L+M+VNPGF GQ+ I +I KI+ K K ++ + VDGG+ N
Sbjct: 121 LIEEIIPFLDGVLVMSVNPGFSGQKFIAKSIEKIKTLKNWKEKYGLNFSIAVDGGINETN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ AGAD+LV+G F ++K L
Sbjct: 181 ADVVSSAGADILVMGYGIFKNNNLEQFSKLLKK 213
>gi|303232239|ref|ZP_07318938.1| ribulose-phosphate 3-epimerase [Atopobium vaginae PB189-T1-4]
gi|302481649|gb|EFL44710.1| ribulose-phosphate 3-epimerase [Atopobium vaginae PB189-T1-4]
Length = 225
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 4/205 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I I PSILA DFS+L E+ +I A IHFDVMDG FVPN+SFG ++++++ S
Sbjct: 5 TIAIAPSILACDFSQLARELDSIRT--ADAIHFDVMDGHFVPNLSFGVPLLQAVKRVSSL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D H+M+S+ + I DAG D IT H E+ HI R + +I G+K VAINP + +
Sbjct: 63 PVDAHIMVSNPEEQIGWYIDAGADSITIHMEAQTHIHRMIYSIKNAGRKAAVAINPGSAI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L V+ +IDMIL+M+VNPGFGGQ I +T K+ A +R +EVDGGVT
Sbjct: 123 ESLSAVLPDIDMILVMSVNPGFGGQSFIPTTTQKVAALSAFCHERGYDPLIEVDGGVTEN 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGE 206
N L +AGA +LV GSS F +
Sbjct: 183 NAAELARAGARMLVAGSSVFKHEDR 207
>gi|195442232|ref|XP_002068862.1| GK17799 [Drosophila willistoni]
gi|194164947|gb|EDW79848.1| GK17799 [Drosophila willistoni]
Length = 223
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 122/219 (55%), Gaps = 3/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PSIL AD + L E + GA +H DVMDG FVPN++FG +++ LR+ +
Sbjct: 6 KAKIGPSILNADLANLYTESQKLLDNGADYLHLDVMDGSFVPNLTFGHPMVKCLRNNIKT 65
Query: 64 -VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
F+ H+M+S + I +ADAG ++ TFH E + + R + G K G+AI P T
Sbjct: 66 AFFETHMMVSKPEQWIAPMADAGVNLYTFHIEPVEDVCKVCRLVQEAGMKVGLAIKPGTK 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V L + + D++L+MTV PGFGGQ + +PK+ + ++ +EVDGGV +
Sbjct: 126 VEELTEYMSIADLVLVMTVEPGFGGQSFMADMMPKVEWLRQ--NYPNMDIEVDGGVGPKT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I+ +AGA+++V G++ + + ++ +S L
Sbjct: 184 IECCAKAGANMIVSGTAVVGASDQRKVMDEMRNVVQSYL 222
>gi|15221735|ref|NP_176518.1| ribulose-phosphate 3-epimerase, cytosolic, putative /
pentose-5-phosphate 3-epimerase, putative [Arabidopsis
thaliana]
gi|12324354|gb|AAG52146.1|AC022355_7 putative D-ribulose-5-phosphate; 35237-36732 [Arabidopsis thaliana]
gi|20856482|gb|AAM26668.1| At1g63290/F9N12_9 [Arabidopsis thaliana]
gi|21593298|gb|AAM65247.1| putative D-ribulose-5-phosphate [Arabidopsis thaliana]
gi|23505807|gb|AAN28763.1| At1g63290/F9N12_9 [Arabidopsis thaliana]
gi|332195961|gb|AEE34082.1| putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana]
Length = 227
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 127/221 (57%), Gaps = 6/221 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S +I PS+L++DF+ L E + GA +H D+MDG FV N++ GA VI SLR ++++
Sbjct: 5 SPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNA 64
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ +++ +A AG TFH E + + + ++ I A G + GVA+ P TP
Sbjct: 65 YLDCHLMVTNPMDYVDQMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKPGTP 124
Query: 123 VAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V + +++ ++M+L+MTV PGFGGQ+ + S + K+R + ++ +EVDGG+
Sbjct: 125 VEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMMDKVRALRN--KYPTLDIEVDGGLG 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I + AGA+ +V GSS F L + A
Sbjct: 183 PSTIDAAAAAGANCIVAGSSVFGAPKPGDVISLLRASVEKA 223
>gi|187736141|ref|YP_001878253.1| Ribulose-phosphate 3-epimerase [Akkermansia muciniphila ATCC
BAA-835]
gi|187426193|gb|ACD05472.1| Ribulose-phosphate 3-epimerase [Akkermansia muciniphila ATCC
BAA-835]
Length = 217
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 119/215 (55%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS--YSDS 63
I PS+LAADFSR+GEE AGA +H D+MDG FV NISFG ++ ++R D
Sbjct: 3 IISPSLLAADFSRIGEEARRAFDAGADWLHLDIMDGHFVDNISFGPEICAAVRKAVGPDR 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI D + + AG ++I FH E S +IR +L I G K G+A+NP T
Sbjct: 63 FLDAHLMIERPDHYFDRFVRAGVNLICFHVELGDSYYIRNTLGRIREAGVKNGLALNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P +E + EID++L+M+V PGFGGQ + S + K+ +A + S +++DGG+
Sbjct: 123 PFEAVEPYLAEIDLLLVMSVVPGFGGQSFMPSVLDKVEKAAEWRTENRASFLIQMDGGIG 182
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N AGAD+LV GSS F +
Sbjct: 183 QNNAAQCALAGADVLVAGSSTFKAPDMAHAIAEMK 217
>gi|291458610|ref|ZP_06598000.1| ribulose-phosphate 3-epimerase [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419143|gb|EFE92862.1| ribulose-phosphate 3-epimerase [Oribacterium sp. oral taxon 078
str. F0262]
Length = 231
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 99/207 (47%), Positives = 138/207 (66%), Gaps = 5/207 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAADFS L EE+S +AG + +HFDVMDG FVPNISFGA +IRSLR S S FD
Sbjct: 12 LAPSLLAADFSELWEELSKAERAGVRFVHFDVMDGSFVPNISFGAPIIRSLRKRSQSFFD 71
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ ++ + +AG D +T H E++ H+ RSL I +G + G+A+NP TP++ +
Sbjct: 72 VHMMVEEPIRYLEDMKNAGADRVTIHSEAARHLDRSLNRIRELGMQAGLALNPATPLSSV 131
Query: 127 ---EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
+ +D++LIM+VNPGFGGQ+LI T+ KIR+ A+ + + +DGGVT
Sbjct: 132 LLSGGLDSLLDLVLIMSVNPGFGGQKLIPYTLDKIRELAAIRRESGGAYQIGIDGGVTME 191
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEIS 208
N+ S++ AGAD LVVGSS F K IS
Sbjct: 192 NLPSILDAGADFLVVGSSIFRPKERIS 218
>gi|269793256|ref|YP_003318160.1| ribulose-phosphate 3-epimerase [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100891|gb|ACZ19878.1| ribulose-phosphate 3-epimerase [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 232
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 73/210 (34%), Positives = 120/210 (57%), Gaps = 4/210 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
+ PS+L+AD +G + ++ A +H DVMDG FVPN++FG +R+LR + +
Sbjct: 18 LAPSLLSADMMDVGGSVESLRGA-FDWLHVDVMDGHFVPNLTFGPGFVRALRGRFPHAFL 76
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ D ++ A AG D++ H E++ H+ R + ++ +G GV++NP TPV
Sbjct: 77 DVHLMVEEPDRMVSDFASAGADLLCVHVEAARHLHRLIGSMRDLGVMAGVSLNPATPVEW 136
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+ V+ +D++L+M+VNPGFGGQ+ I T+ K R + +E+DGG+ N
Sbjct: 137 VYPVLHMVDLVLVMSVNPGFGGQRFIPETLEKTVALARYREARGLGFLIEMDGGLGEENC 196
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ +AG D++V GS+ F Q A +
Sbjct: 197 AEVCRAGCDVVVAGSAVFGQADPHRAATGI 226
>gi|255522674|ref|ZP_05389911.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J1-175]
Length = 196
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 87/199 (43%), Positives = 122/199 (61%), Gaps = 4/199 (2%)
Query: 24 SNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIAD 83
+ K G +H D+MDG FVPNI+FG D I+ ++ + FD H+M+ D +I + +
Sbjct: 1 EVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVE 60
Query: 84 AGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNP 143
AG +IT H E++ H+ R+++ I + G + GV +NP TP + LE V+D+ID IL+MTVNP
Sbjct: 61 AGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNP 120
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
G GGQ+ +S++ KIR+ KA IG R I +EVDGGV + K AGADL+VVGS F
Sbjct: 121 GLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKECTLAGADLIVVGSYLF-- 178
Query: 204 KGEISYAKRLNDLKKSALA 222
E L L K L
Sbjct: 179 --EGDIEANLEKLSKGVLT 195
>gi|328948720|ref|YP_004366057.1| ribulose-phosphate 3-epimerase [Treponema succinifaciens DSM 2489]
gi|328449044|gb|AEB14760.1| ribulose-phosphate 3-epimerase [Treponema succinifaciens DSM 2489]
Length = 211
Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 80/200 (40%), Positives = 129/200 (64%), Gaps = 2/200 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADFS L I + G+ +H DVMDG FVP +S+G VI S+R + FD
Sbjct: 8 LSPSLLSADFSDLTSAFKFIEEKGSSFVHVDVMDGHFVPQVSYGQPVISSIRKCTKLPFD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI ++ I ++G D +TFH E++ H R ++ +H GKK G+A+ P TP++ +
Sbjct: 68 VHLMIERPENSIVSYIESGADFVTFHIEATCHADRCVQLVHDAGKKAGIALCPATPLSAV 127
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E+++ +D++L+M+VNPG+GGQ+LI TI KIR+ + +++ + VDGG+ ++
Sbjct: 128 EELLPFVDIVLVMSVNPGWGGQKLIPYTIEKIRKLADIQREKNFKYLISVDGGINQETLE 187
Query: 185 SLVQAGADLLVVGSSFFNQK 204
+++AG D++V GSSFF
Sbjct: 188 DVLEAGTDIVVSGSSFFRGN 207
>gi|256810570|ref|YP_003127939.1| ribulose-phosphate 3-epimerase [Methanocaldococcus fervens AG86]
gi|256793770|gb|ACV24439.1| ribulose-phosphate 3-epimerase [Methanocaldococcus fervens AG86]
Length = 220
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 80/221 (36%), Positives = 121/221 (54%), Gaps = 7/221 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SIL+ADF L EEI +AG H D+MDG FVPNIS G + + ++ +
Sbjct: 2 VKIGASILSADFGNLNEEIKKAEEAGVDFFHVDIMDGHFVPNISIGIGIAKDIKKIAKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I+ G D ITFH E+ R+++ I +G + VA+NP T ++
Sbjct: 62 VDAHLMVENPDQFIDEFK--GMDYITFHIEAVKFPFRTIKKIREIGAEPIVALNPATSLS 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ E+ +LIMTV PGF GQ+ I KI + K +I + VDGG+
Sbjct: 120 SVGYILGEVHAVLIMTVEPGFSGQKFIPIMTKKIEKLKDIIANNGYDTKIFVDGGINVET 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V+AGAD+L+ S+ F ++ K + DL++SAL
Sbjct: 180 APLAVKAGADVLIAASAIFGKED---IKKAVKDLRESALKA 217
>gi|296415738|ref|XP_002837543.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633415|emb|CAZ81734.1| unnamed protein product [Tuber melanosporum]
Length = 226
Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 85/230 (36%), Positives = 122/230 (53%), Gaps = 27/230 (11%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKA-GAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M P I PSILA+DF L E S I K+ GA +H D+MDG FVPNI+ GA V+ +R
Sbjct: 1 MAPKPIIAPSILASDFGNLAHECSRIIKSEGADWLHIDIMDGHFVPNITIGAPVVTCIRR 60
Query: 60 -------YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPES---SPHIR----RSLRT 105
++ VFDCH+M++ + DAGCD+ FH E+ S + +
Sbjct: 61 SVDRSEDWAKGVFDCHMMVAEPQKWLQDFKDAGCDLYCFHHEAAEISKDPKTPSAELIEN 120
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
IHA+G K GVAI P TP DM+L+MTV PGFGGQ+ +PK+ +
Sbjct: 121 IHALGLKAGVAIKPGTPP----------DMVLVMTVEPGFGGQKFRPECMPKVEALRKRY 170
Query: 166 GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + +EVDGG+ I +AGA+++V G++ F + +L +
Sbjct: 171 PE--LDIEVDGGLGLGTIDLAAEAGANVIVAGTAVFGAQSPKEVIAKLRE 218
>gi|270290367|ref|ZP_06196592.1| ribulose-phosphate 3-epimerase [Pediococcus acidilactici 7_4]
gi|304384755|ref|ZP_07367101.1| ribulose-phosphate 3-epimerase [Pediococcus acidilactici DSM 20284]
gi|270281148|gb|EFA26981.1| ribulose-phosphate 3-epimerase [Pediococcus acidilactici 7_4]
gi|304328949|gb|EFL96169.1| ribulose-phosphate 3-epimerase [Pediococcus acidilactici DSM 20284]
Length = 215
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 135/216 (62%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD + L +++ + GA +H DVMDG FVPN+SFG + ++ L D
Sbjct: 2 IKVAPSILSADPANLMKDVEQVQ--GADYLHVDVMDGSFVPNLSFGLNTVKGLAQDCDIK 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++++ A AG II H ES+ HI R+++ I G + V +NP TP+
Sbjct: 60 LDVHLMIQNPENYVEQFAQAGASIIGVHVESTQHIARAIQLIKQAGAQAEVVVNPGTPLT 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
LE+++ E+D +LIM+VNPGFGGQ+ +ES+I K+++ AL R + +E+DGG++ +N
Sbjct: 120 ELEELLPEVDQVLIMSVNPGFGGQKFLESSISKVKRLSALRQARGLEFDIEIDGGISDQN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K + AG D+ V GS FN + L DL K
Sbjct: 180 VKQVYDAGVDVAVAGSYIFNAPDYTKQVQTLKDLTK 215
>gi|309776527|ref|ZP_07671508.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308915704|gb|EFP61463.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 221
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 122/206 (59%), Gaps = 5/206 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL+ D+SR E++ + ++ AK +HFDVMDG FVPN++FG D+++ +
Sbjct: 1 MKELVIAPSILSLDYSRTSEQLKELDESNAKWMHFDVMDGHFVPNLTFGPDLLKGFKKAV 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR---RSLRTIHAMGKKTGVAIN 118
+ V D H+M+ + D I A AG DIITFH E+ + R I AMG + GV++
Sbjct: 61 NMVMDVHIMVDNPDMVSEIFAKAGADIITFHLEAVKDMDACLELCRKIRAMGVQAGVSVK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P+T V L + EID+ILIM+V PGFGGQ +E T+ K+R + I K + +E+DG
Sbjct: 121 PKTGVEGLLAHLKEIDLILIMSVEPGFGGQSFMEDTLEKVRVLREQIEKEGLDTRIEIDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFN 202
G+ K V AG D LV GS F
Sbjct: 181 GINKETAKLAVAAGVDTLVAGSYVFK 206
>gi|115401810|ref|XP_001216493.1| ribulose-phosphate 3-epimerase [Aspergillus terreus NIH2624]
gi|114190434|gb|EAU32134.1| ribulose-phosphate 3-epimerase [Aspergillus terreus NIH2624]
Length = 246
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 87/246 (35%), Positives = 131/246 (53%), Gaps = 39/246 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M+P I PSIL+ADF+ LG E S G+ +H D+MDG FVPN++FGA V+ +R
Sbjct: 1 MSPPAIIAPSILSADFACLGHECSTKMDQGSDWLHVDIMDGHFVPNMTFGAPVVTKIRSH 60
Query: 59 ------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
+ FDCH+MI + AGCD+ FH E++
Sbjct: 61 VARPTEPHGKGTFDCHMMI------MEEFKSAGCDLYCFHYEAAIASVAAQDPTDTSTTR 114
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI------DEIDMILIMTVNPGFGGQQ 149
R +R IH G + G+AI P+TPV +L D++ + DM+L+MTV PGFGGQ+
Sbjct: 115 RTSPRELIRYIHEQGMQAGIAIKPDTPVDVLWDILESKDEQERPDMVLVMTVYPGFGGQK 174
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK++ +A ++++EVDGG+ I +AGA+++V GS+ F +
Sbjct: 175 FMTSELPKVQALRARY--PNLNIEVDGGLGLGTIDQAAEAGANVIVAGSAVFGAQDPADV 232
Query: 210 AKRLND 215
+L D
Sbjct: 233 IAKLRD 238
>gi|170049894|ref|XP_001858610.1| ribulose-phosphate 3-epimerase [Culex quinquefasciatus]
gi|167871570|gb|EDS34953.1| ribulose-phosphate 3-epimerase [Culex quinquefasciatus]
Length = 224
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 82/220 (37%), Positives = 126/220 (57%), Gaps = 4/220 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSD 62
S +I PSIL AD S+L EE + GA +H DVMDG FVPN++FG V++ LR D
Sbjct: 5 SAKIGPSILNADLSQLHEESQRLLDNGADYLHLDVMDGTFVPNLTFGHPVVKCLRNKIKD 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPET 121
+ F+ H+M+ + I +ADAG + TFH E + R + G K G+AI P T
Sbjct: 65 AFFETHMMVQAPQQWIEPMADAGVNQYTFHIEPVMDSVVDICRKVQEAGMKVGLAIKPGT 124
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +++ I DM+LIMTV PGFGGQ+ + +PK++ + ++ +EVDGGV
Sbjct: 125 PVEAVKEFIAIADMVLIMTVEPGFGGQKFMADMMPKVQWLRE--NYPNLDIEVDGGVGLA 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I + +AGA+++V G++ + + ++L + A+
Sbjct: 183 TIDACAKAGANMIVAGTAIIRADDQAAVIRQLKHSVEGAI 222
>gi|289192967|ref|YP_003458908.1| ribulose-phosphate 3-epimerase [Methanocaldococcus sp. FS406-22]
gi|288939417|gb|ADC70172.1| ribulose-phosphate 3-epimerase [Methanocaldococcus sp. FS406-22]
Length = 221
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 80/219 (36%), Positives = 120/219 (54%), Gaps = 4/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I SIL+ADF L EEI +AG H D+MDG FVPNIS G + + ++ +
Sbjct: 2 IKIGASILSADFGHLKEEIRKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKYVKEITKLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ ++D IN D ITFH E+ R++ I ++G + VA+NP TP+
Sbjct: 62 VDVHLMVENVDLFINEF--ENMDYITFHIEAVKFPFRTINRIKSIGAEPIVALNPATPLD 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++ E+ +LIMTV PGF GQ+ I KI + K +I + + VDGG+
Sbjct: 120 RIEYILGEVHAVLIMTVEPGFSGQKFIPIMTKKIEKLKNMIVENGYDTKIFVDGGINVET 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
V+AGAD+L+ S+ F + + ++L + AL
Sbjct: 180 APLAVKAGADVLIAASAIFGKGDVKTAVEKLKNSALKAL 218
>gi|312076830|ref|XP_003141036.1| rpe protein [Loa loa]
gi|307763800|gb|EFO23034.1| rpe protein [Loa loa]
Length = 228
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 76/221 (34%), Positives = 121/221 (54%), Gaps = 8/221 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDS 63
I PSIL +D S L E+ + GA +H DVMDG FVPN++FG VI LR +
Sbjct: 10 IICPSILNSDLSNLAEDCRRLLHYGADYLHLDVMDGHFVPNLTFGHPVIDCLRRNLGPEP 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES---SPHIRRSLRTIHAMGKKTGVAINPE 120
FD H+M+ + + + + AG FH E+ + + I G K GVAI P
Sbjct: 70 FFDVHMMVLNPERWVEPMKKAGASQFVFHLEAMESDKSCQMLIDRIKHFGMKVGVAIKPC 129
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ +E ++D +DM+L+MTV PGFGGQ+ + + + K+R ++ ++++VDGGVT
Sbjct: 130 TPIEKIETLVD-MDMVLVMTVEPGFGGQKFMSNMMEKVRILRSTHPF--LNIQVDGGVTL 186
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
N++ +AGA+++V G+ + + + +AL
Sbjct: 187 DNVEVCAKAGANVIVSGTGILKAPNPATAIAEMREKVSAAL 227
>gi|162447123|ref|YP_001620255.1| ribulose-phosphate 3-epimerase [Acholeplasma laidlawii PG-8A]
gi|161985230|gb|ABX80879.1| ribulose-phosphate 3-epimerase [Acholeplasma laidlawii PG-8A]
Length = 210
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 4/212 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL A+F RL +E+ +I + G+ IH DVMDG FVPNISFG ++ + +
Sbjct: 1 MKVAPSILTANFIRLEDELKSIEE-GSDYIHVDVMDGHFVPNISFGPAIVSQIGELTKLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ I+ + + IT H E + + S+R I +GKK G+AI P T V
Sbjct: 60 MDIHLMVEHPLDWIDKVIFPTTEFITIHAECNRF-KESIRRILYLGKKAGLAIKPSTDVD 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ + ++D++L+M V PG+GGQ I++ + KI + L + ++VDGG+
Sbjct: 119 FIKPYLSQLDLVLVMGVEPGYGGQLFIQNQLKKIEELAQLKEENGYHYEIQVDGGINVST 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K + AGA ++V G+ FN + + L
Sbjct: 179 AKQVKDAGATIVVAGTFIFNYEDRKERIESLK 210
>gi|281358754|ref|ZP_06245230.1| ribulose-phosphate 3-epimerase [Victivallis vadensis ATCC BAA-548]
gi|281314781|gb|EFA98818.1| ribulose-phosphate 3-epimerase [Victivallis vadensis ATCC BAA-548]
Length = 234
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I + PS+LAADF+ L EI + A IH DVMDGCFVPNISFG VI+S+R ++ +
Sbjct: 12 ILVSPSVLAADFTELAAEIDRAVQGKADLIHLDVMDGCFVPNISFGPPVIKSIRKRTELI 71
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+MI + A+AG D +TFH E + ++ I G G+++ P TP
Sbjct: 72 LDTHIMIEHPVRYAKAFAEAGSDHLTFHLECADPTAEAIEAIRQAGCTVGISLKPATPAE 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +D ID++L+MTV PGFGGQ+ + +PKI + I +R++ LE DGG+
Sbjct: 132 AVFPWLDRIDLVLVMTVEPGFGGQKFMADQMPKIAAIRREIKRRNLHVQLEADGGIDETT 191
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ GA+++V G+S F G + RL
Sbjct: 192 VIPTASCGANMIVAGTSVFRHPGGAAEGIRL 222
>gi|158313557|ref|YP_001506065.1| ribulose-phosphate 3-epimerase [Frankia sp. EAN1pec]
gi|158108962|gb|ABW11159.1| Ribulose-phosphate 3-epimerase [Frankia sp. EAN1pec]
Length = 254
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 115/203 (56%), Gaps = 3/203 (1%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+LAADF R+ + + A +H DVMD FVPN++F D + +LR +D+ DCHLM
Sbjct: 1 MLAADFGRIADAARAV-AGHADWLHVDVMDYHFVPNLAFSPDTVDALRRVTDTPLDCHLM 59
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
I + D A+ G +T H E+ I R+ I A G +TG+A+ P TPV D +
Sbjct: 60 IENPDRWAPGFAERGAANVTIHAEAVGDIARTTDAIRAAGARTGLAVKPATPVEHYLDDL 119
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQ 188
D++L+MT+ PGFGGQ+ ++ +PKI A+ LI +R + L++DGGV I+ +
Sbjct: 120 HRFDLLLLMTIEPGFGGQKFMDEVLPKIAAARRLIDERGLDLWLQIDGGVNRETIERSAE 179
Query: 189 AGADLLVVGSSFFNQKGEISYAK 211
AG D+ V G++ F + +
Sbjct: 180 AGVDVFVAGTAVFGLDDPAAAVE 202
>gi|239618304|ref|YP_002941626.1| ribulose-phosphate 3-epimerase [Kosmotoga olearia TBF 19.5.1]
gi|239507135|gb|ACR80622.1| ribulose-phosphate 3-epimerase [Kosmotoga olearia TBF 19.5.1]
Length = 215
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 127/214 (59%), Gaps = 4/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSILAADF+ L EI I A IH DVMDG FVPNI+FG ++ +L D
Sbjct: 4 VSPSILAADFANLSAEIDKIKD--ADFIHVDVMDGVFVPNITFGTPIMEALNKLDTPPLD 61
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +I A+ G I+ H E+ H+ R + I ++ + VA+NP TPV+ L
Sbjct: 62 VHLMIDNPSQYIEKFANLGASILAVHIEAERHLHRLVDRIKSLDVEAFVAVNPHTPVSAL 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
E++I +D +LIMTVNPGF GQ I T KI + L ++ ++ + VDGG+ +N +
Sbjct: 122 EEIIQFVDGVLIMTVNPGFTGQSFIPETAQKIAKLDHLRKEKGLNFRIAVDGGINLKNAQ 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++V GAD+L++G++ F + +++ +LKK
Sbjct: 182 TVVDYGADILIMGAAIFRSENPAEVIQKVKELKK 215
>gi|213965572|ref|ZP_03393766.1| ribulose-phosphate 3-epimerase [Corynebacterium amycolatum SK46]
gi|213951731|gb|EEB63119.1| ribulose-phosphate 3-epimerase [Corynebacterium amycolatum SK46]
Length = 222
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I I PSILAADF+RL E++ + A A +H DVMDG FVPN+SFGA V+ ++ +
Sbjct: 1 MSAPI-IAPSILAADFARLDREVAAV--ANADWLHIDVMDGHFVPNLSFGAPVLAAVAAV 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLMI + + ++ AG + FH E++ R I + G K G ++ P
Sbjct: 58 TGKYLDVHLMIENPEKWVDTYIKAGASSVIFHVEAADDAIALARRIRSQGVKAGFSLRPG 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ D + E D +L+M+V PGFGGQ + + K+ + + I + +E+DGG+
Sbjct: 118 TPIEPWLDHLAEFDEVLVMSVEPGFGGQSFMPDQLAKVEKLRERIDAEGLDTLIEIDGGI 177
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+++ I+S AG D V GS+ F + +
Sbjct: 178 SAKTIESAAAAGCDAFVAGSAVFGAEDRAAAVDE 211
>gi|260903810|ref|ZP_05912132.1| ribulose-phosphate 3-epimerase [Brevibacterium linens BL2]
Length = 220
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 4/218 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I+I PSIL++DFS L E++ I + A H DVMD FVPN++FG V+ +++ S
Sbjct: 2 AIEINPSILSSDFSDLRGELAKI--STADMAHIDVMDNHFVPNLTFGPPVVERIQAISPI 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI+ D H + A+ GC +TFH E++ R R I +G K +A+ P TP+
Sbjct: 60 PLDAHLMIAEADRHAPVYAELGCASVTFHAEAAAAPVRLAREIRKLGAKASLALKPATPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSR 181
D++ E D ILIMTV PGFGGQ+ ++ +PKIR+ + I + + +VDGGV++
Sbjct: 120 EPFIDLLGEFDQILIMTVEPGFGGQKFLDVCLPKIRRTREAISASGLEIKLQVDGGVSTS 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++ +V AGAD+LV GS+ + + + L +L S
Sbjct: 180 TVERVVDAGADVLVAGSAVYGPEDAAAAISGLRELAAS 217
>gi|268576292|ref|XP_002643126.1| Hypothetical protein CBG15299 [Caenorhabditis briggsae]
gi|187027210|emb|CAP33636.1| hypothetical protein CBG_15299 [Caenorhabditis briggsae AF16]
Length = 229
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 81/228 (35%), Positives = 122/228 (53%), Gaps = 8/228 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + PSIL AD + L E + AGA +H DVMDG FVPN++ G V+ SLR
Sbjct: 1 MPLRAYVCPSILNADLAALASECKKLLAAGADWLHLDVMDGHFVPNLTIGHPVVESLRKS 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP----HIRRSLRTIHAMGKKTG 114
D+ FD HLM+S+ ++ +A AG TFH E+ + + I G K G
Sbjct: 61 LGPDAFFDVHLMVSNPGQWVDPMAKAGASQFTFHYEAVDGGDVAVGELIEKIRKSGMKVG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
+++ P T V + + ID LIMTV PGFGGQ+ +E+ + K+R + S++++V
Sbjct: 121 LSVKPGTSVEHILKHAEHIDNALIMTVEPGFGGQKFMENMMEKVRAIRN--AHPSLTVQV 178
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
DGGVT NI+ +AGA+ +V G+ K + + ++A+A
Sbjct: 179 DGGVTPENIEISAKAGANAIVSGTGIIKAKDQAEAISTIKTAVENAIA 226
>gi|225683185|gb|EEH21469.1| ribulose-phosphate 3-epimerase [Paracoccidioides brasiliensis Pb03]
Length = 249
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 87/246 (35%), Positives = 131/246 (53%), Gaps = 35/246 (14%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVI------ 54
M P I PSIL+ADF+ LG E S++ K+ + IH D+MDG FVPNI+FGA V+
Sbjct: 1 MAPPTIIAPSILSADFASLGSECSHLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRLH 60
Query: 55 --RSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
R R FDCH+MIS + + DAGCD+ FH E++
Sbjct: 61 VERPSRRLGKGTFDCHMMIS--EKWVKDFKDAGCDLYCFHYEAAVTSTAAKVPADKSTTR 118
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQ 149
+R IH G + G+AI P+T V +L D++++ D++L+MTV PGFGGQ+
Sbjct: 119 RTSPTELIRYIHEQGMQAGIAIKPDTSVDVLWDILEQKDPMDRPDIVLVMTVYPGFGGQK 178
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ S +PK+ + +++EVDGG+ + +AGA+++V GS+ F+ +
Sbjct: 179 FMASELPKVNALRTRY--PDLNIEVDGGLGEGTVDLAAEAGANVIVAGSAVFSAQDPAKV 236
Query: 210 AKRLND 215
L D
Sbjct: 237 IAMLRD 242
>gi|331697234|ref|YP_004333473.1| ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326951923|gb|AEA25620.1| ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
Length = 223
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 5/210 (2%)
Query: 11 ILAADFSRLGEEISNI---TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDC 67
+L+ADF+RL +E + GA +H DVMD FVPN++ G V+ SL ++ DC
Sbjct: 1 MLSADFARLADEADVVTGPVGEGADWLHIDVMDAHFVPNLTLGLPVVESLLRATEVPLDC 60
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLMI D A+AG +T H E++ R + A G + G++I P TP+
Sbjct: 61 HLMIDDPDRWAPAYAEAGAYNVTVHAEAAHDPVALARNLRAAGARAGLSIKPGTPLEDHL 120
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIKS 185
D + D +LIM+V PGFGGQ I + K+R A+ L+ ++ +E+DGG+ + ++
Sbjct: 121 DTLKHYDTLLIMSVEPGFGGQAFIPEVLDKVRTARRLVDTGHLTVLVEIDGGINADTVEQ 180
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AG D V GS+ + + + L +
Sbjct: 181 AAEAGVDCFVAGSAVYGADDPLRAVRALRE 210
>gi|302338556|ref|YP_003803762.1| ribulose-phosphate 3-epimerase [Spirochaeta smaragdinae DSM 11293]
gi|301635741|gb|ADK81168.1| ribulose-phosphate 3-epimerase [Spirochaeta smaragdinae DSM 11293]
Length = 220
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 128/216 (59%), Gaps = 1/216 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + PS+L+ADF + I I + A +H DVMDG FVPNI+FG ++ +R
Sbjct: 1 MNNQPLVAPSVLSADFGDIAAAIDRIEASQADMVHLDVMDGHFVPNITFGPKMVADIRKR 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM+ + +SH++ DAG D ITFH E+ H R ++ I K G+++ P
Sbjct: 61 TKLPLDVHLMVDNPESHVDAFIDAGADYITFHLEAVTHAHRLIQRIRDAKVKAGISLVPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS-ISLEVDGGVT 179
TP + + ++++++D++L+MTVNPGFGGQ+LI + K+ Q K + S I L VDGG+
Sbjct: 121 TPASAISELLEDLDLVLVMTVNPGFGGQKLIPGCLRKVTQIKTMFEGASPILLSVDGGIN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+++ V AGA+LLV GS+FF + + L
Sbjct: 181 RDTVRAAVSAGANLLVSGSAFFRAEDPAEEVRFLKA 216
>gi|170019678|ref|YP_001724632.1| ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|169754606|gb|ACA77305.1| Ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
Length = 214
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 84/204 (41%), Positives = 136/204 (66%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSI AD RL +EI + + + +H D+MDG +V NI+FG + I +++ S +F
Sbjct: 3 KILPSIFGADILRLKDEIHFLEEEQTEILHVDLMDGTYVSNIAFGPNQIAAMKKASSMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + HI+ + + G ++I+ H ES+PH+ ++ I G+K GV +NP TP ++
Sbjct: 63 DVHMMLANPERHIDDVINTGAEMISVHYESTPHVHYIIQKIKKAGRKAGVVLNPGTPESV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E ++D+ID IL+MT+NPG GQ I ++ KIR K +I + I +EVDGGV N+K
Sbjct: 123 IEYLLDDIDYILLMTINPGQPGQTFIHKSLEKIRNTKKMISGKDIQIEVDGGVNLDNVKQ 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+ +AGADL+VVG + FN++ SY
Sbjct: 183 VKEAGADLIVVGGALFNKQPRESY 206
>gi|295672155|ref|XP_002796624.1| ribulose-phosphate 3-epimerase [Paracoccidioides brasiliensis Pb01]
gi|226283604|gb|EEH39170.1| ribulose-phosphate 3-epimerase [Paracoccidioides brasiliensis Pb01]
Length = 270
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 52/265 (19%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVI------ 54
MTP I PSIL+ADF+ LG S++ K+ + IH D+MDG FVPNI+FGA V+
Sbjct: 1 MTPPTIIAPSILSADFAALGSACSHLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRLH 60
Query: 55 --RSLRSYSDSVFDCHLMIS-------------------SIDSHINIIADAGCDIITFHP 93
R R FDCH+MIS + DAGCD+ FH
Sbjct: 61 VERPSRRLGKGTFDCHMMISELDRVCSTNIAGGQLVTNTPPQKWVKDFKDAGCDLYCFHY 120
Query: 94 ESS-----------------PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE---- 132
E++ +R IH + G+AI P+T V +L D++++
Sbjct: 121 EAAITSTAAKGPADESTTGRTSPTELIRYIHEQEMQAGIAIKPDTSVDVLWDILEQKDPM 180
Query: 133 --IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
DM+L+MTV PGFGGQ+ + S +PK+ + +++EVDGG+ + +AG
Sbjct: 181 DRPDMVLVMTVYPGFGGQKFMASELPKVNALRTRY--PDLNIEVDGGLGEGTVDLAAEAG 238
Query: 191 ADLLVVGSSFFNQKGEISYAKRLND 215
A+++V GS+ F+ + L D
Sbjct: 239 ANVIVAGSAVFSAQDPAKVIAMLRD 263
>gi|289644956|ref|ZP_06476997.1| ribulose-phosphate 3-epimerase [Frankia symbiont of Datisca
glomerata]
gi|289505229|gb|EFD26287.1| ribulose-phosphate 3-epimerase [Frankia symbiont of Datisca
glomerata]
Length = 232
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 120/219 (54%), Gaps = 3/219 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ QI PS+LAADF R+ + + A +H DVMD FVPN++F D + +LR+ +
Sbjct: 3 TAQIYPSLLAADFGRVADAARAVE-GHADWLHVDVMDYHFVPNLAFAPDTVTALRTVTTI 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI D A+ G +T H E+ + R+ I A G +TG+A+ P TPV
Sbjct: 62 PLDCHLMIDDPDRWAAGYAERGAANVTIHAEAVRDLPRTTDAIRAAGARTGLAVKPATPV 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
D + D++L+MT+ PGFGGQ+ + +PKI A+ L+ R + L++DGGV +
Sbjct: 122 ERYVDDLHRFDLLLLMTIEPGFGGQKFMNEVLPKIEAARRLLDDRGLDLWLQIDGGVNAE 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ +AG D+ V G++ + + + L +A
Sbjct: 182 TIERAARAGVDVFVAGTAVYGAADPAAALEALRAQALAA 220
>gi|222033747|emb|CAP76488.1| ribulose-phosphate 3-epimerase (EC 5131) [Escherichia coli LF82]
gi|312946601|gb|ADR27428.1| ribulose-phosphate 3-epimerase [Escherichia coli O83:H1 str. NRG
857C]
gi|320193259|gb|EFW67897.1| Ribulose-phosphate 3-epimerase [Escherichia coli WV_060327]
gi|324008913|gb|EGB78132.1| ribulose-phosphate 3-epimerase [Escherichia coli MS 57-2]
Length = 214
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 136/204 (66%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSI AD RL +EI + + + +H D+MDG +V NI+FG + I +++ S +F
Sbjct: 3 KILPSIFGADILRLKDEIHFLEEEQTEILHVDLMDGTYVSNIAFGPNQIAAMKKASSMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + HI+ + + G ++I+ H ES+PH+ ++ I G+K GV +NP TP ++
Sbjct: 63 DVHMMLANPERHIDDVINTGAEMISVHYESTPHVHYIIQKIKKAGRKAGVVLNPGTPESV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E ++D+ID IL+MT+NPG GQ I ++ KIR K +I R I +EVDGGV N+K
Sbjct: 123 IEYLLDDIDYILLMTINPGQPGQTFIHKSLEKIRNTKKMISGRDIQIEVDGGVNLDNVKQ 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+ +AGADL+VVG + FN++ SY
Sbjct: 183 VKEAGADLIVVGGALFNKQPHESY 206
>gi|325478710|gb|EGC81821.1| ribulose-phosphate 3-epimerase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 221
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 131/216 (60%), Gaps = 2/216 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ DFS+L E + K IH DVMDG FVPNISFG VI+ +R +D
Sbjct: 2 VELSPSILSCDFSKLQENLDQTKNTQLKMIHIDVMDGVFVPNISFGFKVIKDIRDKNDYF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I +AG D IT H ES + + I ++G + G+++ P+T ++
Sbjct: 62 FDTHLMIVDPIRYIERFKEAGADRITIHYESCENPLDVINKIKSLGIEAGISLRPKTELS 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ ++ E+D +L+M+V PGFGGQ IES++ ++R+ + I K ++ +E+DGG+ + N
Sbjct: 122 KILPLLKEVDAVLVMSVEPGFGGQSFIESSLDRVRELRDYIDKNNLACKIEIDGGIKTTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +++AG D +V GS F ++ ++ ++ K
Sbjct: 182 VDKVIKAGCDEIVSGSDIFGKEDIKGQIEKYYEIFK 217
>gi|285017096|ref|YP_003374807.1| ribulose-phosphate 3-epimerase [Xanthomonas albilineans GPE PC73]
gi|283472314|emb|CBA14820.1| probable ribulose-phosphate 3-epimerase protein [Xanthomonas
albilineans]
Length = 222
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 94/209 (44%), Positives = 136/209 (65%), Gaps = 3/209 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
I PSIL+ADF+RLGEE+ + +AGA IHFDVMD +VPN++ G V ++LR + +
Sbjct: 4 CIIAPSILSADFARLGEEVDAVLRAGADWIHFDVMDNHYVPNLTIGPMVCKALRKHGVTA 63
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ +D I A+AG +I+FHPE+S H+ RS++ I + G + G+A+NP TP+
Sbjct: 64 AIDVHLMVEPVDRLIPDFAEAGASLISFHPEASRHVHRSIQLIKSHGCQVGLALNPATPL 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
IL+ V+D++D++L+M+VNPGFGGQ I S + K+R + I + I LE+DGGV
Sbjct: 124 EILDWVLDDLDLVLVMSVNPGFGGQTFIPSALDKLRAIRTCIDASGKPIRLEIDGGVKPE 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYA 210
NI ++ AGAD V GS+ FN
Sbjct: 184 NIAAVAAAGADTFVAGSAIFNAPDYAEVI 212
>gi|118380001|ref|XP_001023165.1| ribulose-phosphate 3-epimerase family protein [Tetrahymena
thermophila]
gi|89304932|gb|EAS02920.1| ribulose-phosphate 3-epimerase family protein [Tetrahymena
thermophila SB210]
Length = 242
Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDG-----CFVPNISFGADVIRSLR 58
I PSIL+AD S L +E + GA +H DVMDG FVPN +FG V++ LR
Sbjct: 7 QAIIAPSILSADLSSLADECQKLNDQGADWLHIDVMDGQIVLYHFVPNFTFGQTVVKCLR 66
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
FDCHLMIS + +AG D TFH E+ + + + I G + G+AI
Sbjct: 67 KKVKGFFDCHLMISEPQKWVKDFHNAGADQYTFHYEAVENQEQLCKEIKETGMRVGIAIK 126
Query: 119 PETPVAI-LEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
P+T + L +ID +DM+LIMTV PGFGGQ+ ++ + K+ + K + ++VD
Sbjct: 127 PKTQIEDKLLQLIDSNLVDMVLIMTVEPGFGGQKFMQDMMQKVELLRRKYPK--LDIQVD 184
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ NI + +AGA+++V GS N + +
Sbjct: 185 GGIVCENIDIVAKAGANVIVSGSGIVNHADPKKAMAFMKE 224
>gi|261366622|ref|ZP_05979505.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
gi|282571442|gb|EFB76977.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
Length = 218
Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 4/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSV 64
+I SIL+ADF+ L + + + + GA +H DVMDG FVPNIS+GA V++ L D+
Sbjct: 3 KIAASILSADFANLQHDCTRLLQEGADLLHIDVMDGHFVPNISYGAPVLQCLHKALPDAY 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
+D HLMIS + A AG +ITFH E+ P + I A G + G++I P TPV
Sbjct: 63 YDVHLMISDPARYAADFAKAGAGLITFHLEAVPDTAEEVIAAIRATGCQVGISIRPGTPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ +D+IL+M+V PGFGGQ+ + T ++ A +R + LEVDGG+ +
Sbjct: 123 EAAFPYLGVVDLILVMSVEPGFGGQKFLPGTPQRLAALDAERKRRGCATILEVDGGINAE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
VQAGAD LV GSS F+ + + L+
Sbjct: 183 TGPLCVQAGADWLVAGSSLFHAADPAAVVRLLH 215
>gi|307719345|ref|YP_003874877.1| ribulose-phosphate 3-epimerase [Spirochaeta thermophila DSM 6192]
gi|306533070|gb|ADN02604.1| ribulose-phosphate 3-epimerase [Spirochaeta thermophila DSM 6192]
Length = 215
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
++ SIL A+F+RLG+EI + ++H DVMDG +V NISFG VI +LR +S V
Sbjct: 3 KLSASILNANFARLGDEIREVEDL-IDELHLDVMDGHYVDNISFGLPVIGTLRKEFSSLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS + + +AG DI+ FH E++ L+ I G+ G+++NP T V
Sbjct: 62 FDTHLMISHPERYWEEFIEAGSDILVFHLEATTKAFLILQRIKEKGRLAGISLNPATDVR 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+LE V D +D +LIMTV PGFGGQ+ + + KI +A+ L+G R + +EVDGG+ I
Sbjct: 122 LLEPVKDILDRVLIMTVEPGFGGQRFLTPMLRKIERARELLGDR-VDIEVDGGINPTTIA 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
AGA VVGSS F + + RL +
Sbjct: 181 EARSAGATTFVVGSSIFQSEDKRGEILRLRE 211
>gi|315186725|gb|EFU20483.1| ribulose-phosphate 3-epimerase [Spirochaeta thermophila DSM 6578]
Length = 215
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 127/211 (60%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
++ SIL A+F+RLG+EI + ++H DVMDG +V NISFG VI +LR +S V
Sbjct: 3 KLSASILNANFARLGDEIREVEDL-IDELHLDVMDGHYVDNISFGLPVIGTLRKEFSSLV 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMIS + + +AG DI+ FH E++P L+ I G+ G+++NP T V
Sbjct: 62 FDTHLMISHPERYWEEFIEAGSDILVFHLEATPKAFLILQRIKEKGRLAGISLNPATDVR 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+LE V D +D +LIMTV PGFGGQ+ + + KI QA+ ++G R + +EVDGG+ I
Sbjct: 122 LLEPVKDLLDRVLIMTVEPGFGGQRFLTPMLRKIEQAREILGDR-VDIEVDGGINPTTIV 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
AGA VVGSS F + + RL +
Sbjct: 181 EARSAGATTFVVGSSIFQSEDKRGEILRLRE 211
>gi|28812245|dbj|BAC65120.1| ribulose-phosphate 3-epimerase [Burkholderia multivorans]
Length = 196
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 82/197 (41%), Positives = 119/197 (60%), Gaps = 9/197 (4%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
IHFDVMD +VPN++ G V ++R + D HLM+ +D + A AG ++I+FHP
Sbjct: 1 IHFDVMDNHYVPNLTIGPLVCEAIRPHVQVPIDVHLMVRPVDRIVPDFAKAGANLISFHP 60
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
E S HI R+L I G K G+ NP TP+ L+ V+D +D +L+M+VNPGFGGQ I
Sbjct: 61 EGSDHIDRTLTLIRDHGCKAGLVFNPATPLNYLDHVMDRLDYVLLMSVNPGFGGQSFIPE 120
Query: 154 TIPKIRQAKALIGK------RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
T+ K+R+A+A I R I LEVDGGV + NI + AGAD V GS+ F +
Sbjct: 121 TLNKLREARARIDAYTERTGREILLEVDGGVKADNIAEIAAAGADTFVAGSAIFGKPD-- 178
Query: 208 SYAKRLNDLKKSALAID 224
Y K +++++ + A++
Sbjct: 179 -YRKVIDEMRAALAAVE 194
>gi|2851605|sp|P51013|RPE_RHORU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
Length = 225
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 137/230 (59%), Gaps = 13/230 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I+I PS+L+ADF+ + + GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MTRAIRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM +D I+ A+AG D+ITFHPE+S H+ RS++ I G K GVA+NP
Sbjct: 61 TSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA-----KALIGKRSISLEVD 175
+P+++L+ +++++D++LIM+VNPGFGGQ I S +PKI +A G R VD
Sbjct: 121 SPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALANGRRRACRGDR-----VD 175
Query: 176 GGVTSRNIKSLVQAGADLLV-VGSSFFNQKGEISYAKRLNDLKKSALAID 224
GGV + ++L + GAD+LV + + F + +S L +
Sbjct: 176 GGVNPADARALARPGADILVRL--AIFGASDRAKAIASIRGAAESGLGQE 223
>gi|209731036|gb|ACI66387.1| Ribulose-phosphate 3-epimerase [Salmo salar]
Length = 198
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 114/197 (57%), Gaps = 4/197 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ S +I PSIL++D + LG E + + GA +H DVMDG FVPNI+FG ++ LRS
Sbjct: 1 MSYSAKIGPSILSSDLACLGSECVRMMECGADYLHLDVMDGHFVPNITFGHPMVECLRSC 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH ES+ + ++ I G K G+AI
Sbjct: 61 VGPDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLESTTNAGNLIKEIRETGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L +IDM L+MTV PGFGGQ+ +E +PK+ ++ S+ +EVDGGV
Sbjct: 121 PGTTVEELAPWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRSQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQAGADLLV 195
I +AGA V
Sbjct: 179 GPSTIHKCAEAGAHWTV 195
>gi|159901845|gb|ABX10580.1| ribulose-phosphate 3-epimerase [uncultured planctomycete 5H12]
Length = 234
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 116/209 (55%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PS+L DF L EI + +AG K +H DVMDG FVPN S+G ++ ++R +D D
Sbjct: 17 ILPSLLLCDFGNLEREIEKLHEAGFKSLHLDVMDGVFVPNFSYGITIVEAVRKLTDMPLD 76
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ A AG D+ITFH E+ R L I G G+A+NP T V+++
Sbjct: 77 VHLMMVEPQKYVQQFASAGADLITFHAEAVDDTRPVLEAIRETGIAGGIALNPGTDVSMI 136
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E+ +D D+ L+M+VN GFGGQ IES + K + I LE+DGG+ + I
Sbjct: 137 ENDLDLCDVFLVMSVNAGFGGQSFIESVLEKFSHIRNAPNGDRILLEIDGGINTDTIGQA 196
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
G DL V GS+ F Q + RL +
Sbjct: 197 HAMGVDLFVAGSAIFRQADYRAAHDRLLE 225
>gi|269958396|ref|YP_003328183.1| ribulose-phosphate 3-epimerase [Anaplasma centrale str. Israel]
gi|269848225|gb|ACZ48869.1| ribulose-phosphate 3-epimerase [Anaplasma centrale str. Israel]
Length = 272
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 137/217 (63%), Gaps = 2/217 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + S+L+ADF+ L I+ + AGA +H DVMDGCFVPN++ G +I +R +
Sbjct: 56 AKGVVVSASMLSADFTNLSASIAAVETAGADWLHIDVMDGCFVPNLTMGPIIIAGIRQCT 115
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLM+ + H+ + DAG DI+T H ES H+ R +R + GKK GV++ P+T
Sbjct: 116 RLVLDVHLMVRTPALHLRSVIDAGADIVTVHAESDVHLYRFVREAKSYGKKVGVSLVPKT 175
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
++LE VI E+D++L+M+V+PGFGGQ+ + S + KI + +A++ + S+ + VDGGVT
Sbjct: 176 HHSVLEYVIHELDLVLVMSVDPGFGGQEFLVSQLRKIEKIRAMVEQYSLPTKISVDGGVT 235
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ N+ S++ AGAD++VVG+S F + L
Sbjct: 236 TENVGSIIGAGADVVVVGTSLFKSANMCKVVQTLKSF 272
>gi|212704412|ref|ZP_03312540.1| hypothetical protein DESPIG_02467 [Desulfovibrio piger ATCC 29098]
gi|212672133|gb|EEB32616.1| hypothetical protein DESPIG_02467 [Desulfovibrio piger ATCC 29098]
Length = 243
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 125/204 (61%), Gaps = 4/204 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
+ + PS+L+ADFSRL +E++ + AG +H D+MDG FVPNI+FG VI+SLR S
Sbjct: 1 MILSPSLLSADFSRLADELAALEAAGISWLHLDIMDGAFVPNITFGQPVIKSLRKRSSKL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD HLMI ++ DAG D++ H E+ H +R+L I +G K G+A NP T +
Sbjct: 61 FFDVHLMIEEPARYLESFRDAGADMLVIHAEADRHPQRTLSEIRRLGMKAGLAFNPGTDI 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTS 180
A L + ++DM+L+M+VNPGF GQ+ I + KIR +A++ + ++VDGG
Sbjct: 121 ASLRWLAPDLDMVLVMSVNPGFSGQKFIPQSFDKIRATRAMLNAAGAGDVLIQVDGGACP 180
Query: 181 RNIKSLVQAGADLLVVGSSFFNQK 204
N LV GAD+LV GS+FF
Sbjct: 181 ENTAQLVADGADVLVSGSAFFGHP 204
>gi|88608693|ref|YP_506225.1| ribulose-phosphate 3-epimerase [Neorickettsia sennetsu str.
Miyayama]
gi|88600862|gb|ABD46330.1| ribulose-phosphate 3-epimerase [Neorickettsia sennetsu str.
Miyayama]
Length = 220
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 78/222 (35%), Positives = 118/222 (53%), Gaps = 4/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+I PS+L+ADF L ++ + ++GA IH DVMDG FVPN++FG +I ++
Sbjct: 1 MHRMIKISPSLLSADFLNLHSDVKLLEESGADSIHIDVMDGHFVPNLTFGPVIIEQIKRI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + HLMI + + +AG D I H E+ H+ R + I + K GVA+NP
Sbjct: 61 TSIPIEVHLMILNAEQTFQDYINAGADTIFVHSEACFHLDRMVNAIKSQSVKVGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T L + + ID +LIMTVNPGF Q + S + K+ + I + + L VDGG+
Sbjct: 121 TSEEALRYLYNSIDAVLIMTVNPGFASQVFLTSQLAKVSLVRRRIVELGVDVTLAVDGGI 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +V AGA LV GS F+ + ++ L+ A
Sbjct: 181 NAETANLVVSAGAGTLVTGSYLFS--NRKNLGAKIASLRVLA 220
>gi|56685888|dbj|BAD79110.1| ribulose-phosphate 3-epimerase [Synechococcus elongatus PCC 6301]
Length = 189
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 76/186 (40%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 38 VMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
+MDG FVPNI+ G ++ +LR + D HLMI + ++ A AG DII+ E+ P
Sbjct: 1 MMDGRFVPNITIGPLIVEALRPVTQKPLDVHLMIVEPEKYVPDFAKAGADIISVQAEACP 60
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
H+ R+L I +GK+ GV +NP TPV LE V++ D+ILIM+VNPGFGGQ I + +PK
Sbjct: 61 HLHRNLAQIKDLGKQAGVVLNPSTPVETLEYVLELCDLILIMSVNPGFGGQSFIPAVLPK 120
Query: 158 IRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IR+ +A+ +R + +EVDGG+ + N +++AGA+ +V GS+ FN + +
Sbjct: 121 IRKLRAMCDERGLDPWIEVDGGLKANNTWQVLEAGANAIVAGSAVFNAPDYAEAIAAIRN 180
Query: 216 LKKSAL 221
K+ L
Sbjct: 181 SKRPEL 186
>gi|62185162|ref|YP_219947.1| ribulose-phosphate 3-epimerase [Chlamydophila abortus S26/3]
gi|62148229|emb|CAH63988.1| putative epimerase [Chlamydophila abortus S26/3]
Length = 231
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P I PSI+ D + +G E I ++GA IH DVMDG FVPN++FG VI ++ +D
Sbjct: 7 PKTLIAPSIMGGDLACIGAEAKRIEESGADLIHIDVMDGHFVPNLTFGPGVIAAINRSTD 66
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ H MI + + +G D I H E+S ++ L I G + G+A +PET
Sbjct: 67 IFLEVHAMIYTPFDFVEEFVKSGADRIIVHFEASEDLKELLSYIKKCGIQAGLAFSPETS 126
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGV 178
+ + + D+IL+M+V+PGF GQ I KIR K I + +EVDGG+
Sbjct: 127 IEFIPPFLPFCDVILLMSVHPGFCGQGFIPDIPDKIRFTKQAIKTMGLEGSCLIEVDGGI 186
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ K +AGAD+LV S F +K E + +++ L+
Sbjct: 187 NETSAKICREAGADILVAASYIF-EKNEQTMEEKVLLLR 224
>gi|262341113|ref|YP_003283968.1| ribulose-phosphate 3-epimerase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272450|gb|ACY40358.1| ribulose-phosphate 3-epimerase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 221
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 121/211 (57%), Gaps = 2/211 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L+A+ + L +I + ++ A H D+MD FV NISFG+ + ++ Y++
Sbjct: 4 IIAPSLLSANLAFLHRDIKMLNESEADWFHIDIMDSSFVSNISFGSLFTKYVKKYANKPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + +I + G D + H E+ H+ +++ +I G K GVA+NP TPV +
Sbjct: 64 DVHLMILEPERYIKKFKNCGSDHLHIHYEACIHLNKTIFSIKKYGMKVGVAVNPHTPVFL 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L+D+I +ID +L+M+VNPG GQ+ I T K+ K LI K+ +EVDGG+ N
Sbjct: 124 LQDIIKDIDFVLLMSVNPGSSGQKFINQTYQKLEDTKNLILKKDSSALIEVDGGINLENA 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L + GAD+LV G++ F+ R+
Sbjct: 184 SLLFKNGADILVSGTTIFSNSNPKEIIHRMK 214
>gi|256851314|ref|ZP_05556703.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 27-2-CHN]
gi|260660738|ref|ZP_05861653.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 115-3-CHN]
gi|282933241|ref|ZP_06338628.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 208-1]
gi|297206184|ref|ZP_06923579.1| possible ribulose-phosphate 3-epimerase [Lactobacillus jensenii
JV-V16]
gi|256616376|gb|EEU21564.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 27-2-CHN]
gi|260548460|gb|EEX24435.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 115-3-CHN]
gi|281302745|gb|EFA94960.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 208-1]
gi|297149310|gb|EFH29608.1| possible ribulose-phosphate 3-epimerase [Lactobacillus jensenii
JV-V16]
Length = 220
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 124/215 (57%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD LG +I T+AG + H D+MDG FVPN+S+G +++ + V
Sbjct: 1 MIISPSILNADNLNLGRDIKKATQAGITRFHIDIMDGHFVPNLSYGPQLVQDFKREFPLV 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM +++++ I AG D++ FH E++ + L + + G K G+ +NPET V
Sbjct: 61 EAEVHLMSNNLETTIPAFTQAGADLLEFHFEATNKVDYWLDYLASNGVKAGLVLNPETDV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
A L+ + ++ +L+M+V+PGFGGQ+ I T KI Q K L + ++ +EVDGG+ +
Sbjct: 121 ASLKPYLKKLKQVLLMSVHPGFGGQKYIPETAEKIAQLKQLTNEAGVNIPIEVDGGINDK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
QAGAD+LV GS F S ++L +
Sbjct: 181 TAPLAAQAGADILVCGSYIFKNGDIASQIRKLEGI 215
>gi|308490739|ref|XP_003107561.1| hypothetical protein CRE_13345 [Caenorhabditis remanei]
gi|308250430|gb|EFO94382.1| hypothetical protein CRE_13345 [Caenorhabditis remanei]
Length = 228
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 120/227 (52%), Gaps = 8/227 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + PSIL AD + L E + AGA +H DVMDG FVPN++FG V+ SLR
Sbjct: 1 MPLRAYVCPSILNADLASLASECKKLLTAGADWLHLDVMDGHFVPNLTFGHPVVESLRKS 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP----HIRRSLRTIHAMGKKTG 114
S+ FD HLM+S+ + +A AG TFH E+ + + I G K G
Sbjct: 61 LGSEPFFDVHLMVSNPGQWVEPMAKAGATQFTFHYEAIDGGDVAVGELIEKIRKSGMKVG 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
+++ P T V + + +D LIMTV PGFGGQ+ +E+ + K+R ++ + ++++V
Sbjct: 121 LSVKPGTSVEHILKHAEHLDNALIMTVEPGFGGQKFMENMMEKVRTIRSAHPE--LTIQV 178
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
DGGVT NI +AGA+ +V G+ + + + ++ +
Sbjct: 179 DGGVTPENIDISAKAGANAIVSGTGIIKAPDQSVAISTIKNAVEAVI 225
>gi|258654275|ref|YP_003203431.1| ribulose-phosphate 3-epimerase [Nakamurella multipartita DSM 44233]
gi|258557500|gb|ACV80442.1| ribulose-phosphate 3-epimerase [Nakamurella multipartita DSM 44233]
Length = 222
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 118/205 (57%), Gaps = 4/205 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ I PSIL ADF+ L +E++ + AGA +H DVMD FVPN++ G V++SL +D
Sbjct: 2 TVLIAPSILNADFAHLADEVAAV--AGADWLHVDVMDNHFVPNLTLGLPVVQSLAKVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLMI + A+AG +T H E+ +HA G + G+++ P TP+
Sbjct: 60 PLDCHLMIEDPNRWAVGYAEAGAHNVTVHAEAVADPIAMAADLHAAGARAGLSLKPGTPL 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
DV+ D +L+MTV PGFGGQ + + K+R A+ L+ ++ ++VDGG+++
Sbjct: 120 EAWTDVLKHYDTLLVMTVEPGFGGQAFMADMMDKVRTARRLVDTGHLTVVVQVDGGISAD 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGE 206
I+ +AGAD V GS+ ++
Sbjct: 180 TIEIAAEAGADCFVAGSAVYSAADP 204
>gi|15835016|ref|NP_296775.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum Nigg]
gi|270285182|ref|ZP_06194576.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum Nigg]
gi|270289201|ref|ZP_06195503.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum Weiss]
gi|301336578|ref|ZP_07224780.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum MopnTet14]
gi|14195180|sp|Q9PKR7|RPE_CHLMU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|7190438|gb|AAF39254.1| ribulose-phosphate 3-epimerase [Chlamydia muridarum Nigg]
Length = 228
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSI+ AD + LG+ NI ++GA IH DVMDG FVPNI+FG +I ++ +
Sbjct: 3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRST 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D + H MI + + AG D I H E++ +++ L I G + G+A +PET
Sbjct: 63 DLFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENLKEILDYIRKCGVQAGIAFSPET 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI----GKRSISLEVDGG 177
+ + I D+IL+M+V PGF GQ+ I TI KIR + I + S +EVDGG
Sbjct: 123 SIEFISAFIPLCDVILLMSVQPGFCGQKFIPDTIEKIRFVRQAIQTLGKEGSCLIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + ++ +AGAD+LV S FF K I+ +++
Sbjct: 183 IDEESARACREAGADILVAASYFFK-KDSINMKEKV 217
>gi|229820541|ref|YP_002882067.1| ribulose-phosphate 3-epimerase [Beutenbergia cavernae DSM 12333]
gi|229566454|gb|ACQ80305.1| ribulose-phosphate 3-epimerase [Beutenbergia cavernae DSM 12333]
Length = 221
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 85/218 (38%), Positives = 123/218 (56%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL +DFS L E++ I AGA H DVMD FVPN++ G V+ S+ S
Sbjct: 3 ILITPSILNSDFSDLRGELAKI--AGADYAHVDVMDNHFVPNLTLGLPVVESIVRASPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI+ D A+AG +TFH E++ R R I + G + G+A+ P TP+
Sbjct: 61 VDAHLMITDPDRWAPAYAEAGAGSVTFHAEAAAAPVRLAREIRSQGARAGLALRPATPIE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
D++ E+DM+L+MTV PGFGGQ + S +PKIR+ + + + ++VDGGV+
Sbjct: 121 PYVDLLAEVDMVLVMTVEPGFGGQPFLTSMLPKIRRTRDAVAAAGLDVWVQVDGGVSRST 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I+ AGA++ V GS+ + + + L DL A
Sbjct: 181 IEQAANAGANVFVAGSAVYAAEDAAAEVSTLRDLADGA 218
>gi|284045172|ref|YP_003395512.1| ribulose-phosphate 3-epimerase [Conexibacter woesei DSM 14684]
gi|283949393|gb|ADB52137.1| ribulose-phosphate 3-epimerase [Conexibacter woesei DSM 14684]
Length = 228
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ +I PSIL+ADF+RLG ++ + AGA+ IH DVMDG FVP I+ G V+ +L
Sbjct: 9 RATRIAPSILSADFARLGAQVDEVVAAGARVIHVDVMDGHFVPPITMGPIVVGALAEQVH 68
Query: 63 S---VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ V D HLMI + + A AG D IT H E++PH+ +L I G AINP
Sbjct: 69 AAGAVLDVHLMIERPERQVAEFAKAGADSITVHAEATPHLNYALSAIKDGGCAAAAAINP 128
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TPV L +V + +DM L M+VNPG+GGQ I +++ KI + + L+ + ++EVDGGV
Sbjct: 129 GTPVGALAEVAELLDMALCMSVNPGWGGQPFIPASLDKIARLRGLLPQ-GTAIEVDGGVD 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGE 206
+ + GA +LV GS+ F
Sbjct: 188 AATAGPCARHGASVLVAGSAIFGASDP 214
>gi|167765899|ref|ZP_02437952.1| hypothetical protein CLOSS21_00390 [Clostridium sp. SS2/1]
gi|317498861|ref|ZP_07957146.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|167712397|gb|EDS22976.1| hypothetical protein CLOSS21_00390 [Clostridium sp. SS2/1]
gi|291559798|emb|CBL38598.1| ribulose-5-phosphate 3-epimerase [butyrate-producing bacterium
SSC/2]
gi|316893857|gb|EFV16054.1| ribulose-phosphate 3-epimerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 218
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L +D ++ E+ + K G IH D+ DG FVP ISFGA+ ++ LR ++D V
Sbjct: 3 IISPSLLNSDTYQIKEQFEALEKCGINYIHIDITDGHFVPMISFGANTVKDLRKHTDFVL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM+ + ++ I +IADAG DIIT H E++ HI RS++TI GKK G+AINP TPV++
Sbjct: 63 DCHLMVENPENLIPVIADAGADIITVHTEATKHIYRSIQTIKKCGKKAGIAINPGTPVSM 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+++++ D++L MT NPG G+ I S K++ L ++ S ++VDG + +
Sbjct: 123 IKEILPMADLVLCMTTNPGVFGESFIPSVADKVKNLCELREQKGYSYQIQVDGSINDQTA 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGAD+ V GS F E K ++
Sbjct: 183 IVCKKAGADIFVSGSYIFGGNIEERIHKIMDA 214
>gi|325108970|ref|YP_004270038.1| ribulose-phosphate 3-epimerase [Planctomyces brasiliensis DSM 5305]
gi|324969238|gb|ADY60016.1| ribulose-phosphate 3-epimerase [Planctomyces brasiliensis DSM 5305]
Length = 230
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 127/217 (58%), Gaps = 5/217 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKA-GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L DF L E++ + KA IHFDVMD FVPN+S+GA +I S+RS +D F
Sbjct: 15 IAPSMLKCDFGDLAGELAALEKATQTPLIHFDVMDAHFVPNLSYGAMLIESVRSRTDLPF 74
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
+ HLMIS +++ AGCDIITFH E+ P L+ I + G+ G+A+NP TPVA
Sbjct: 75 EAHLMISEPARYLDDYIKAGCDIITFHIEAVPEPTELLQKIKSHGRMAGLALNPGTPVAS 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E + + D++L+M+V PGFGGQQ + + KI+ + + + L VDGG+ I
Sbjct: 135 IEPFLADCDLVLVMSVEPGFGGQQFMPVALEKIQAIREKLKPEQL-LSVDGGIGLDTIAP 193
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+GAD V GSS FN E Y ++ L + A
Sbjct: 194 CANSGADTFVCGSSIFN---EADYPTAMDGLLTAISA 227
>gi|308809153|ref|XP_003081886.1| Fushion of putative sugar/xylulosekinase and ribulose-phosphate
(IC) [Ostreococcus tauri]
gi|116060353|emb|CAL55689.1| Fushion of putative sugar/xylulosekinase and ribulose-phosphate
(IC) [Ostreococcus tauri]
Length = 755
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 11/228 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS+LAAD L E++ + GA +H D+MDG FVPN++ G V+ L
Sbjct: 529 KRRAIVCPSLLAADQGALASEVNRMLDEGADWLHVDIMDGHFVPNLTIGPPVVADLSRRV 588
Query: 62 ---DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVA 116
D FDCHL +++ + + +A AG +TFH E RTI ++G + VA
Sbjct: 589 GPRDVFFDCHLSVNNPATLVPALAKAGASSVTFHIEVVNGERAAELCRTIRSLGMRVAVA 648
Query: 117 INPETPVAI--LEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
P T + D+ + +DM+L ++V PGFGGQ+ S + K+R ++ I +
Sbjct: 649 CKPSTSCESSGVYDLCEAGLVDMVLCLSVEPGFGGQKFKPSVLDKVRSLRSRF--PDIDI 706
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++DGGV AGA++LV GS+ F+ L ++A
Sbjct: 707 QMDGGVNPTTAVECAAAGANVLVAGSAIFSAPDPAHVISLLRSAIENA 754
>gi|28572565|ref|NP_789345.1| D-ribulose-5-phosphate 3-epimerase [Tropheryma whipplei TW08/27]
gi|28410697|emb|CAD67083.1| D-ribulose-5-phosphate 3-epimerase [Tropheryma whipplei TW08/27]
Length = 219
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 3/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+ADF L ++ I+ A +H DVMDG FVPNI+FG V++ + S
Sbjct: 2 KIRISPSILSADFCNLERDLQLISS--ADMVHVDVMDGHFVPNITFGLPVVKRICEVSPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + D AD G +TFH E++ + R I + K G+A++P+T +
Sbjct: 60 PLDVHLMVENPDYWALQYADLGVYSVTFHFEAAKDPIATARNIRSNKSKVGLAVSPDTDI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
V+ E+DM+ +MTV PGFGGQ+LI + K + ++S VDGGVT NI
Sbjct: 120 GECVHVLPEVDMLQVMTVYPGFGGQKLIRRVLDKFSRITRS-EFENLSFSVDGGVTLGNI 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ G D V GSS F + + L L K A
Sbjct: 179 SEIASVGVDTFVAGSSVFLSQLPADSVESLRKLAKVA 215
>gi|311280767|ref|YP_003942998.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae SCF1]
gi|308749962|gb|ADO49714.1| ribulose-phosphate 3-epimerase [Enterobacter cloacae SCF1]
Length = 214
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 134/204 (65%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI A+ RL EEI + + +H D+MDG +V NI+FG + I +++ S +F
Sbjct: 3 QILPSIFGANILRLQEEIQFLEAEKTEILHVDLMDGTYVNNIAFGPNQIAAMKKASSMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + H++ + G ++I+ H ES+PH+ ++ I G++ GV +NP TP +
Sbjct: 63 DVHMMLANPERHVDDVIKTGAEMISVHYESTPHVHYIIQKIKQAGRQAGVVLNPGTPENV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E ++D+ID ILIMT+NPG GQ IE ++ KIR K ++ RSI +EVDGGV + K
Sbjct: 123 IEYLLDDIDYILIMTINPGQPGQTFIEKSLEKIRNTKKMVAGRSIKIEVDGGVNTDIAKK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+ +AGADL+VVG + FN+ + SY
Sbjct: 183 VKEAGADLIVVGGALFNKTPKESY 206
>gi|210633105|ref|ZP_03297672.1| hypothetical protein COLSTE_01581 [Collinsella stercoris DSM 13279]
gi|210159259|gb|EEA90230.1| hypothetical protein COLSTE_01581 [Collinsella stercoris DSM 13279]
Length = 211
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 17 SRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDS 76
+ L ++ I A A IH DVMDG FVPN+S+G ++++ + +D D HLM+S+ D
Sbjct: 2 AHLARDLDLI--ACADLIHVDVMDGHFVPNLSYGTAIVKACKGATDIPLDVHLMVSNPDD 59
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
I+ DAG D++T H E+S H+ R++ I G K GV +NP TPV +LED+I+++DM+
Sbjct: 60 TIDWYIDAGADLLTVHYEASTHLHRTIAHIKERGCKAGVVLNPATPVFVLEDIIEDVDMV 119
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLL 194
L+M+VNPGFGGQ I TI K+RQ AL ++ +EVDGGV N + + AGA +L
Sbjct: 120 LLMSVNPGFGGQAFIPRTIEKLRQLTALCASHGVAPLIEVDGGVGIANAEGIAAAGATVL 179
Query: 195 VVGSSFFNQKGEISYAKRLNDLKK 218
V GS+ F K + + + +
Sbjct: 180 VAGSAVFGAKDPAAAVEAIRSAAE 203
>gi|308062812|gb|ADO04700.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Cuz20]
Length = 217
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 125/216 (57%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTKVSKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ ++++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVELVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L QAG D++V GS F K + L ++++
Sbjct: 179 IFELQQAGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|183221046|ref|YP_001839042.1| ribulose-5-phosphate 3-epimerase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911140|ref|YP_001962695.1| pentose-5-phosphate-3-epimerase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775816|gb|ABZ94117.1| Pentose-5-phosphate-3-epimerase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779468|gb|ABZ97766.1| Ribulose-5-phosphate 3-epimerase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 220
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 118/215 (54%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILAA + L E+ K IH DVMDG FVP ISFG + ++S++D
Sbjct: 1 MKISASILAAKLTGLATELPTYKKESIDLIHIDVMDGNFVPQISFGEAFTKEVKSHTDIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+S+ + H+ D ITFH E++ R I G + GV++NP+TP
Sbjct: 61 LDVHLMVSNPELHVPKYFDLKPYCITFHIETTNFSVRLAEEIKKQGIRVGVSLNPQTPPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++ +D++L+MTV+PGF GQ ++S KI + L I LEVDGGV N++
Sbjct: 121 SISQILPYLDLVLLMTVDPGFYGQSFVKSGFEKIAAVRKLTKPYDIELEVDGGVNESNME 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L + G D+ VVGS + + K+L +L S
Sbjct: 181 ELAKLGVDITVVGSGLYKTGDPNAQGKKLKELAAS 215
>gi|283457830|ref|YP_003362428.1| pentose-5-phosphate-3-epimerase [Rothia mucilaginosa DY-18]
gi|283133843|dbj|BAI64608.1| pentose-5-phosphate-3-epimerase [Rothia mucilaginosa DY-18]
Length = 233
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+ L E+ I + A H DVMD FVPN+++G V++ LR S
Sbjct: 3 IAINPSILSADFANLQRELERI--STADAAHIDVMDNHFVPNLTWGPPVVKRLREISPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D A GC+ +TFH E++ + RT+ A G K G+A+ P T V
Sbjct: 61 FDVHLMIEDADRWAPEYASMGCESVTFHAEAAIAPIKLARTLRAEGAKAGMALRPATAVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
D++ E+DM+LIMTV PGFGGQ ++ T+PKI +A I ++ +++VDGG+T
Sbjct: 121 PYLDMLSELDMLLIMTVEPGFGGQAFLDVTLPKIARAAKAIEGANLPVTVQVDGGITEET 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I +AGA V GSS +
Sbjct: 181 ILRAAEAGATCFVAGSSVYG 200
>gi|256370983|ref|YP_003108807.1| ribulose-phosphate 3-epimerase [Acidimicrobium ferrooxidans DSM
10331]
gi|256007567|gb|ACU53134.1| ribulose-phosphate 3-epimerase [Acidimicrobium ferrooxidans DSM
10331]
Length = 224
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 139/223 (62%), Gaps = 4/223 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT ++I PSIL ADF +LG + ++ AG ++H+DVMDG FVPN++ GA VI S R +
Sbjct: 1 MT-KLEIAPSILPADFGQLGPTLQDLQAAGVDRVHWDVMDGVFVPNLTVGAPVIESCRRW 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD F+ HLMI D H+ AGC+++ H E++ H+ RSL I ++G + GVA+NP
Sbjct: 60 SDLPFEAHLMIVDPDRHVESFVRAGCELVIIHAEATAHLHRSLGLIRSLGARAGVALNPS 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGV 178
TP + +E V+D +D+IL+MTVNPGFGGQ+ + S PKI AL + +EVDGGV
Sbjct: 120 TPPSAIEYVMDLLDVILVMTVNPGFGGQRYLASVEPKIASLAALRDLTNPTTRIEVDGGV 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISY-AKRLNDLKKSA 220
+ +V+ G +++V GS+ F G + + + + + A
Sbjct: 180 APDTLAGVVENGGEIVVSGSALFAHPGGLRAGVEAFHAIAEEA 222
>gi|325120554|emb|CBZ56108.1| hypothetical protein NCLIV_065340 [Neospora caninum Liverpool]
Length = 230
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 81/224 (36%), Positives = 130/224 (58%), Gaps = 11/224 (4%)
Query: 1 MTPSIQ--IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+ ++ I PS+LA+D S L E + AG +H D+MDG FVPN++ G V+++LR
Sbjct: 1 MSAQLKPIICPSVLASDLSSLASEAKRMVDAGCDWLHLDIMDGHFVPNLTIGPGVVKALR 60
Query: 59 SYSD-SVFDCHLMISSIDSHINIIADAGCDIITFHPESS----PHIRRSLRTIHAMGKKT 113
+ + FD HLM++ + + ADAG + ITFH E+ + I +G K
Sbjct: 61 GHVKSTFFDVHLMVTDPEKWVQPFADAGANSITFHWEAVGGDLAKAEALAKRIRELGIKA 120
Query: 114 GVAINPETPVAILEDVI--DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+AI P T +A L D + D DM+L+MTV PGFGGQ+ ++ + K+R A++L + ++
Sbjct: 121 GLAIKPATKLADLGDALAGDRFDMLLVMTVEPGFGGQKFMQDMLDKVRVARSLFPR--LN 178
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++VDGG+ +KS AGA+++V G+S F + + + D
Sbjct: 179 IQVDGGLDGETVKSAAFAGANVIVAGTSIFKSENPDALMTFMRD 222
>gi|328851909|gb|EGG01059.1| hypothetical protein MELLADRAFT_39349 [Melampsora larici-populina
98AG31]
Length = 232
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 71/224 (31%), Positives = 125/224 (55%), Gaps = 8/224 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD- 62
I PS+LA+DF L E + K GA+ +H D+MDG FVPNI+ GA V+ +
Sbjct: 3 KAIIAPSVLASDFGNLTAECKRVIKDGAEWLHMDIMDGHFVPNITIGAPVLACVAKSVQG 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESS----PHIRRSLRTIHAMGKKTGVAIN 118
+ DCH+M++ I ++ AG TFH E+ ++ IH G K G+AI+
Sbjct: 63 AYMDCHMMVADPLKWIPDVSKAGGSSYTFHIEACTSSHQDPIEIIQKIHETGMKAGIAIS 122
Query: 119 PETPVAILE-DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P+TP ++ ++ +D++L+MTV+PG GGQ +E + K+++ + ++ ++VDGG
Sbjct: 123 PDTPSNLITNEIGKLVDLLLVMTVHPGRGGQAFMEECVIKVKELRERFPEK--DIQVDGG 180
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
V + +K +AG++++V G++ F K + ++ ++ L
Sbjct: 181 VGPKTVKPCAEAGSNVIVAGTAVFGSPQPGVVIKEMKEIVETEL 224
>gi|227486013|ref|ZP_03916329.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
gi|227236058|gb|EEI86073.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
Length = 218
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSI AADF L EI + + G K IH D+MDG FV ++FG D I++++S +D
Sbjct: 4 IIAPSIFAADFGNLKSEIKKMEENGIKLIHLDIMDGHFVEKMAFGPDHIKAIKSMTDIPI 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + I + +AG DIIT H ESS + L I G K G+ ++P+T
Sbjct: 64 DVHLMVDKPERIIGSVIEAGADIITLHVESSVRLNSCLEKIKRSGSKAGLVLSPQTSEET 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L+ ++D ID++LIMT+NPG + I KI+ K +IG R I +EVDG + NIK
Sbjct: 124 LKYMLDNIDLVLIMTINPGEANLGFNRNMIQKIKNTKKMIGDRDILIEVDGSIDDNNIKY 183
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+AGA++ VVGS FN + LN+LK+
Sbjct: 184 CKKAGANIFVVGSYLFNG----DFIYNLNNLKR 212
>gi|289524258|ref|ZP_06441112.1| ribulose-phosphate 3-epimerase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502914|gb|EFD24078.1| ribulose-phosphate 3-epimerase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 224
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR--S 59
+ + PS+L+A+ + +I I K +H DVMDG FVPN+++G +++ +LR
Sbjct: 1 MRKVILAPSLLSANPLDIAGDIEKI-KGQCDWLHIDVMDGHFVPNLAYGPNLVAALRSDE 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ + I++ G D +T E++PH R L+ I G K G+A+NP
Sbjct: 60 NISLPIDVHLMVEPPECFIDLFLPLGVDYLTVQIEATPHAHRVLQRIRDSGVKCGIALNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TPV + ++ +DM+L+M+VNPGFGGQ+ I + K ++ + +E+DGG
Sbjct: 120 GTPVEWVAPLLPFLDMVLVMSVNPGFGGQKFIPQVLEKAGWLYRERAVKNFNFLIEMDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ N+ + V+ G D++V G++ F K + D
Sbjct: 180 LGLENVHTAVRYGCDVIVAGNAVFGHSDPAFALKTMRD 217
>gi|116492601|ref|YP_804336.1| ribulose-5-phosphate 3-epimerase [Pediococcus pentosaceus ATCC
25745]
gi|116102751|gb|ABJ67894.1| ribulose-5-phosphate 3-epimerase [Pediococcus pentosaceus ATCC
25745]
Length = 215
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 136/216 (62%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I++ PSIL+AD + L +I+ + GA +H DVMDG FVPN+SFG + ++ L +D
Sbjct: 2 IKVAPSILSADPANLMGDINKVE--GADYLHVDVMDGSFVPNLSFGLNTVQGLSKDTDIK 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++++ AG I+ H ES+ HI R+++ I G + V +NP TP+
Sbjct: 60 LDVHLMIQNPENYVEQFVKAGASIVGVHVESTQHIARAIQIIKNAGARAEVVVNPGTPLT 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
LE+++ EID +LIM+VNPGFGGQ+ +ES+I K+++ AL R + +E+DGG++ +N
Sbjct: 120 ELEELLPEIDQVLIMSVNPGFGGQKFLESSISKVKRLSALRQARGLEFDIEIDGGISDKN 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK++ AG D+ V GS F + + L +L K
Sbjct: 180 IKAVYDAGVDVAVAGSYVFGAEDYTKQVQLLKELTK 215
>gi|28493324|ref|NP_787485.1| ribulose-phosphate 3-epimerase [Tropheryma whipplei str. Twist]
gi|28476365|gb|AAO44454.1| ribulose-phosphate 3-epimerase [Tropheryma whipplei str. Twist]
Length = 219
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 3/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I+I PSIL+ADF L ++ I+ A +H DVMDG FVPNI+FG V++ + S
Sbjct: 2 EIRISPSILSADFCNLERDLQLISS--ADMVHVDVMDGHFVPNITFGLPVVKRICEVSPV 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + D AD G +TFH E++ + R I + K G+A++P+T +
Sbjct: 60 PLDVHLMVENPDYWALQYADLGVYSVTFHFEAAKDPIATARNIRSNKSKVGLAVSPDTDI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
V+ E+DM+ +MTV PGFGGQ+LI + K + ++S VDGGVT NI
Sbjct: 120 GECVHVLPEVDMLQVMTVYPGFGGQKLIRRVLDKFSRITRS-EFENLSFSVDGGVTLGNI 178
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ G D V GSS F + + L L K A
Sbjct: 179 SEIASVGVDTFVAGSSVFLSQLPADSVESLRKLAKVA 215
>gi|187251153|ref|YP_001875635.1| ribulose-phosphate 3-epimerase [Elusimicrobium minutum Pei191]
gi|186971313|gb|ACC98298.1| Ribulose-phosphate 3-epimerase [Elusimicrobium minutum Pei191]
Length = 226
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 83/214 (38%), Positives = 119/214 (55%), Gaps = 2/214 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+AD RLGE++ + AGA +H D+MDG FVPN+SFG V +SL + S D
Sbjct: 13 VAPSVLSADMWRLGEQVLEVASAGADWLHLDIMDGHFVPNLSFGPAVCKSLSAKSPLPLD 72
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + I A AG D IT H ES + L++I +G G++I P+T +
Sbjct: 73 VHLMVKYPGAFIKPFAKAGADNITVHIESEDNTLDMLKSIKELGLSAGISIKPDTDAQKI 132
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
++ D+IL+MTV PGFGGQ +E I + + ++ + +EVDGG+ K
Sbjct: 133 IPFLEYTDLILVMTVQPGFGGQAFMEEGRQNIIKVRQILKDKKCLAWVEVDGGINMETAK 192
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V AGAD LV G++ F K K L D+ K
Sbjct: 193 PAVIAGADALVAGNAVFAAKDPGQAVKDLKDIIK 226
>gi|255325952|ref|ZP_05367042.1| ribulose-phosphate 3-epimerase [Rothia mucilaginosa ATCC 25296]
gi|255296967|gb|EET76294.1| ribulose-phosphate 3-epimerase [Rothia mucilaginosa ATCC 25296]
Length = 231
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 118/200 (59%), Gaps = 4/200 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSIL+ADF+ L E+ I + A H DVMD FVPN+++G V++ LR S
Sbjct: 3 IAINPSILSADFANLQRELERI--STADAAHIDVMDNHFVPNLTWGPPVVKRLREISPVP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D A GC+ +TFH E++ + RT+ A G K G+A+ P T V
Sbjct: 61 FDVHLMIEDADRWAPEYASMGCESVTFHAEAAIAPIKLARTLRAEGAKAGMALRPATAVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
D++ E+DM+LIMTV PGFGGQ ++ T+PKI +A I ++ +++VDGG+T
Sbjct: 121 PYLDMLGELDMLLIMTVEPGFGGQAFLDVTLPKIARAAKAIEGANLPVTVQVDGGITEET 180
Query: 183 IKSLVQAGADLLVVGSSFFN 202
I +AGA V GSS +
Sbjct: 181 ILRAAEAGATCFVAGSSVYG 200
>gi|319442109|ref|ZP_07991265.1| ribulose-phosphate 3-epimerase [Corynebacterium variabile DSM
44702]
Length = 224
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 9/219 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I PSILAADF+ L EI+ + GA +H DVMD FVPN+SFG V ++R
Sbjct: 1 MSQQTLIAPSILAADFADLAGEIARV--PGADWLHIDVMDNHFVPNLSFGLPVAEAVRRR 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK---KTGVAI 117
+D+ D HLMI + A G +TFH E+ + ++ + + G+++
Sbjct: 59 TDTFTDVHLMIEDPERWAPEYAAFG--NVTFHLEAVADVDAAVALAATLRAAGTRAGISV 116
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P T V L D + + D++L+M+V PGFGGQ + + K+R + I + +E+D
Sbjct: 117 KPGTAVEPLLDHLADFDLVLVMSVEPGFGGQSFMPEVLEKVRALRTRIDAEGLDTFIEID 176
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
GG+ AG D+ V GSS F + + +
Sbjct: 177 GGIGVETAAGSAAAGVDVYVAGSSVFGKDDPEAQVTAIR 215
>gi|254796717|ref|YP_003081553.1| ribulose-phosphate 3-epimerase [Neorickettsia risticii str.
Illinois]
gi|254589954|gb|ACT69316.1| ribulose-phosphate 3-epimerase [Neorickettsia risticii str.
Illinois]
Length = 217
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 118/215 (54%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PS+L+ADF L ++ + ++GA IH DVMDG FVPN +FG +I ++ +
Sbjct: 2 IKISPSLLSADFLNLHSDVKLLEESGADSIHIDVMDGHFVPNFTFGPVIIEQIKRITSIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLMI + + +AG D I H E+ H+ R + I + G K GVA+NP T
Sbjct: 62 IEVHLMILNAEQTFQDYINAGADTIFVHSEACFHLDRMVNAIKSQGVKVGVALNPATSEE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L + + ID +LIMTVNPGF Q + S + K+ + I + +++ VDGG+ +
Sbjct: 122 ALRYLYNSIDAVLIMTVNPGFASQTFLTSQLDKVGLVRRRIVELGVYVTIAVDGGINAET 181
Query: 183 IKSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDL 216
+V AGA+ L+ GS F N+K + L L
Sbjct: 182 ANLVVSAGAETLITGSYLFSNRKNLGAKIASLRSL 216
>gi|237835673|ref|XP_002367134.1| ribulose-phosphate 3-epimerase [Toxoplasma gondii ME49]
gi|211964798|gb|EEA99993.1| ribulose-phosphate 3-epimerase [Toxoplasma gondii ME49]
gi|221485331|gb|EEE23612.1| ribulose-phosphate 3-epimerase, putative [Toxoplasma gondii GT1]
gi|221506192|gb|EEE31827.1| ribulose-phosphate 3-epimerase, putative [Toxoplasma gondii VEG]
Length = 230
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 130/224 (58%), Gaps = 11/224 (4%)
Query: 1 MTPSIQ--IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+ ++ I PS+LA+D S L + + AG +H D+MDG FVPNISFG V+++LR
Sbjct: 1 MSSQLKPIICPSVLASDLSSLASDAKRMVDAGCDWLHLDIMDGHFVPNISFGPGVVKALR 60
Query: 59 SYSD-SVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRR---SLRTIHAMGKKT 113
+ + FD HLM+S + I ADAG + ITFH ES ++R + I A G K
Sbjct: 61 GHLKSAFFDVHLMVSEPEKWIQPFADAGANSITFHWESVGGDLQRAAELAKRIQARGIKA 120
Query: 114 GVAINPETPVAILEDVI--DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+AI P T L + + D DM+L+MTV PGFGGQ+ + + K+R A++L K ++
Sbjct: 121 GLAIKPATKFEDLGEALAGDNFDMLLVMTVEPGFGGQKFMADMLQKVRTARSLFPK--LN 178
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++VDGG+ +K AGA+++V G+S F + + + D
Sbjct: 179 IQVDGGLDGETVKPAASAGANVIVAGTSMFKAENPAALMTFMRD 222
>gi|159037488|ref|YP_001536741.1| ribulose-phosphate 3-epimerase [Salinispora arenicola CNS-205]
gi|157916323|gb|ABV97750.1| Ribulose-phosphate 3-epimerase [Salinispora arenicola CNS-205]
Length = 226
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 80/223 (35%), Positives = 121/223 (54%), Gaps = 4/223 (1%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT P + PSILAADF+ L +E+ + A +H DVMD FVPN++ G V++SLR+
Sbjct: 1 MTVPPPIVAPSILAADFACLADEVRAVEDT-ADWLHVDVMDNHFVPNLTIGLPVVQSLRA 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ FD HLMI ADAG +TFH E+ + + + G K G+AI+
Sbjct: 60 ATTLPFDVHLMIEDPRRWAPGYADAGAYNVTFHVEACDDPVALAKDLRSAGAKAGLAIDR 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
+TP+ D++ D +LIMT+ GFGGQ+ I + + K+R A+ + + +EVDGG
Sbjct: 120 DTPIEPYLDLLPSFDTLLIMTIKAGFGGQRFIPNLLDKVRTARRHVDAGHLEVRIEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + I +AGAD V G++ + +RL L + A
Sbjct: 180 IAADTIAEAAEAGADAFVAGTAVYGADDPAEAVRRLRSLARGA 222
>gi|33520013|ref|NP_878845.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia floridanus]
gi|33504359|emb|CAD83252.1| ribulose-phosphate 3-epimerase [Candidatus Blochmannia floridanus]
Length = 226
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 135/223 (60%), Gaps = 7/223 (3%)
Query: 1 MTPSIQ---IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M ++ I PSILAADFS+LGE++SN+ AGA +HFDVMD +VPN+S G V++SL
Sbjct: 1 MKRDMKEYLIEPSILAADFSKLGEDVSNVISAGADVLHFDVMDNHYVPNLSIGPMVLKSL 60
Query: 58 RSYS-DSVFDCHLMISSI-DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
R+Y D + HLMI I D I +AG I+FHPES+ H+ R L+ I G KTG+
Sbjct: 61 RNYGIDIPINVHLMIKPINDRLILDFLEAGATGISFHPESTDHVDRFLQLIKEHGCKTGL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--E 173
+NP T ++ LE V+ +ID+I++M+VNPGFGGQ + + KI Q + LI +
Sbjct: 121 VLNPSTDLSCLEYVMHKIDVIILMSVNPGFGGQIFLPEILRKITQTRKLIDNNPYDINLA 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
VDGG+ N + ++GA++ ++GS+ FN +
Sbjct: 181 VDGGINMSNFCKICESGANVFIIGSAIFNASNYHDVIYNFRSM 223
>gi|172040660|ref|YP_001800374.1| ribulose-phosphate 3-epimerase [Corynebacterium urealyticum DSM
7109]
gi|171851964|emb|CAQ04940.1| ribulose-phosphate 3-epimerase [Corynebacterium urealyticum DSM
7109]
Length = 228
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 9/214 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PSILAADFS LG E+ I+ A+ +H DVMDG FVPN+SFGA V +SL ++
Sbjct: 10 IIAPSILAADFSALGAEVGAISD--AEWVHIDVMDGHFVPNLSFGAPVAKSLIGKTEQFL 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK---TGVAINPETP 122
D HLMI + D D +TFH E++ + S+ A+ GV++ P TP
Sbjct: 68 DVHLMIEDPQRWVKEYTDF--DNVTFHVEAAGGVEESVALARALRAAGTKAGVSVKPNTP 125
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V L + + E D++L+M+V PGFGGQ+ + + K+R + I + +E+DGG+
Sbjct: 126 VEPLLEHLAEFDLVLVMSVEPGFGGQKFMPEVLDKVRALRERIDAEGLETLIEIDGGIGP 185
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
AG D+ V GSS F ++ +
Sbjct: 186 ETAVQAAAAGVDVYVAGSSVFGKEDRNQAIGEIR 219
>gi|168242811|ref|ZP_02667743.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194447623|ref|YP_002047009.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194405927|gb|ACF66146.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205338036|gb|EDZ24800.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 214
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 132/206 (64%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PS+ A+ RL EEI + + +H D+MDG +V NI+FG + I +++ S F
Sbjct: 3 QILPSVFGANILRLQEEIQFLETEKTEILHVDLMDGTYVSNIAFGPNQIAAMKKASSMTF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + HI+ + G ++I+ H ES+PH+ ++ I G+K GV +NP TP +
Sbjct: 63 DVHMMLANPERHIDDVIKTGAEMISVHYESTPHVHYIIQKIKKAGRKAGVVLNPGTPEHV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+E ++D+ID +LIMT+NPG GQ IE ++ KIR K ++ R+I +EVDGGV + K
Sbjct: 123 IEYLLDDIDYVLIMTINPGQPGQTFIEKSLEKIRNTKKMVAGRNIQIEVDGGVNAEIAKK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAK 211
+ +AGADL+VVG + FN SY K
Sbjct: 183 VKEAGADLIVVGGALFNDAPRESYQK 208
>gi|218282577|ref|ZP_03488821.1| hypothetical protein EUBIFOR_01403 [Eubacterium biforme DSM 3989]
gi|218216492|gb|EEC90030.1| hypothetical protein EUBIFOR_01403 [Eubacterium biforme DSM 3989]
Length = 219
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 114/207 (55%), Gaps = 6/207 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I I PSIL+ D+S + ++ + + AK +HFDVMDG FVPN++FG D+++ +
Sbjct: 3 EIVIAPSILSLDYSNVSAQLEELKASKAKWLHFDVMDGHFVPNLTFGPDILKGFKKACPL 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPH----IRRSLRTIHAMGKKTGVAINP 119
D HLM+ ++ I G D++TFH E+ + I+ L IH +G K G+ + P
Sbjct: 63 FMDVHLMVEDPKTYAPIFIQNGADLVTFHTEALDNDLSRIQGLLDEIHNLGAKGGIVVKP 122
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGG 177
T + E V+ D++L+M+V PGFGGQ+ + + K+ K + ++ +E+DGG
Sbjct: 123 NTAIEPFESVLKSCDLVLVMSVEPGFGGQKFMADMLKKVEWLKEKRQELNLSYRIEIDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ KS + AG D LV GS F
Sbjct: 183 INQDTYKSALDAGCDTLVAGSYVFKND 209
>gi|227495438|ref|ZP_03925754.1| ribulose-phosphate 3-epimerase [Actinomyces coleocanis DSM 15436]
gi|226830985|gb|EEH63368.1| ribulose-phosphate 3-epimerase [Actinomyces coleocanis DSM 15436]
Length = 230
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 4/219 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PSIL D + L E++ I A H D+MD FVPN+++G V+ ++ + +
Sbjct: 10 SKPAVISPSILNCDIADLTGELTKIRN--ADYAHVDIMDNHFVPNLTWGLPVVEAVIAKN 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI+ D A+AG +TFH E++ R R + +G K G+ + P T
Sbjct: 68 ILPVDAHLMIADPDRWAPAYAEAGSASVTFHAEAAHAPIRLARELRRLGAKAGLGLKPTT 127
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ D++ E DMIL+MTV PGFGGQ +ES I KIR+ + R I ++VDGG++
Sbjct: 128 DIHDYVDLLHEFDMILVMTVEPGFGGQAFLESQIAKIRRVREAANTRQIDLAIQVDGGIS 187
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I+ +AGAD+ V GS+ F + L +
Sbjct: 188 RATIERAAEAGADVFVAGSAVFRAADAYEEVEVLRSMAN 226
>gi|145594415|ref|YP_001158712.1| ribulose-phosphate 3-epimerase [Salinispora tropica CNB-440]
gi|145303752|gb|ABP54334.1| ribulose-5-phosphate 3-epimerase [Salinispora tropica CNB-440]
Length = 226
Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 121/223 (54%), Gaps = 4/223 (1%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT P + PSILAADF+ L +E+ I A +H DVMD FVPN++ G V++SLR+
Sbjct: 1 MTVPLPIVAPSILAADFACLADEVRAIEDT-ADWVHVDVMDNHFVPNLTIGLPVVQSLRA 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ FD HLMI ADAG +TFH E+ + + + G K G+AI+
Sbjct: 60 ATRLPFDVHLMIEDPRRWAPGYADAGAYNVTFHAEACDDPVALAKDLRSAGAKAGLAIDR 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
+TP+ D++ D +LIMT+ GFGGQ+ I + + K+R A+ + + +EVDGG
Sbjct: 120 DTPIEPYLDLLPSFDTLLIMTIKAGFGGQRFIPNLLDKVRTARRHVDAGHLELRIEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ I +AGAD V G++ F +RL L +SA
Sbjct: 180 IALNTIAEAAEAGADAFVAGTAVFGADDPAEAVRRLRSLAQSA 222
>gi|27904954|ref|NP_778080.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|46396626|sp|Q89A59|RPE_BUCBP RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|27904352|gb|AAO27185.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 228
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 140/221 (63%), Gaps = 8/221 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR--- 58
+ S+L+A+FSRLGE+I ++ K+G+ IH+DVMD +V N++FG V+ SLR
Sbjct: 1 MKKFLLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVE 60
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
V D HLM +D I A +II+FHPES+ ++ ++++ I + G K G+A+N
Sbjct: 61 KIKSMVIDVHLMTCPVDDLIIKFAKLDVNIISFHPESTNNVEKTIKLIKSYGCKVGLALN 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDG 176
P TP+ +L++V+D+ID+IL+M+VNPGF GQ+ I S + KIR + LI K ++I LEVDG
Sbjct: 121 PLTPLCVLDNVLDKIDLILLMSVNPGFPGQKFIPSILNKIRIVRELIDKSKKNILLEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G+ NI + G D+ V+GS+ FN I+Y + +
Sbjct: 181 GINLSNIFKIASFGTDIFVIGSAIFNS---INYDLTIRSFR 218
>gi|224438092|ref|ZP_03659031.1| ribulose-phosphate 3-epimerase [Helicobacter cinaedi CCUG 18818]
gi|313144536|ref|ZP_07806729.1| ribulose-phosphate 3-epimerase [Helicobacter cinaedi CCUG 18818]
gi|313129567|gb|EFR47184.1| ribulose-phosphate 3-epimerase [Helicobacter cinaedi CCUG 18818]
Length = 224
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 125/217 (57%), Gaps = 5/217 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I + PS+L+ADFS+LGEE+ I A +H DVMDG FVPN++ G +++S+ S
Sbjct: 11 KKILVAPSVLSADFSKLGEEVRAICDAECDYVHIDVMDGHFVPNLTMGPMIVKSIAKASS 70
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ ++ + + A ++ H E H+ R + I +G K GV +NP T
Sbjct: 71 KPLDIHLMVKNVPFFVELFAPLKPAFMSVHIEEVQHLHRVIWQIKDLGIKAGVVLNPHTN 130
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTS 180
LE ++ +ID++L+M+VNPGFGGQ I S++ K++ K L + + LE+DGGV+
Sbjct: 131 EQDLEYILPDIDLVLLMSVNPGFGGQSFIPSSLKKLKNLKQLRDRLNPNCLLEIDGGVSD 190
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+NI L AG D++V GS F Y + + L+
Sbjct: 191 KNIMDLKNAGIDMVVAGSYIFGSND---YRQAILSLR 224
>gi|257066173|ref|YP_003152429.1| ribulose-phosphate 3-epimerase [Anaerococcus prevotii DSM 20548]
gi|256798053|gb|ACV28708.1| ribulose-phosphate 3-epimerase [Anaerococcus prevotii DSM 20548]
Length = 225
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 124/220 (56%), Gaps = 2/220 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ DFSRL E + + K +H DVMDG FVPNISFG VI +R+ +D
Sbjct: 2 VELAPSILSCDFSRLQENLDDTKDTRLKMLHIDVMDGIFVPNISFGFKVIEDIRNRNDYF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + +I AG D ITFH E++ + R + I + G + G+ + P T
Sbjct: 62 FDTHLMIERPERYIERFVKAGSDRITFHIEATDNPREVISLIKSFGIEAGITLKPATDPK 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ ++ ++D +L+M+V PGFGGQ +E ++ K++ + I K + +E+DGG+ + N
Sbjct: 122 EILPLLKDLDCVLVMSVEPGFGGQSFMEDSLDKVQIFREYIDKNKLDTKIEIDGGIKTTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ ++ AG D +V GS F + + + A +
Sbjct: 182 VSRVIGAGCDEIVSGSDIFGKDDIKKQIEEYYKIFDQAKS 221
>gi|119590878|gb|EAW70472.1| ribulose-5-phosphate-3-epimerase, isoform CRA_a [Homo sapiens]
Length = 191
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 75/190 (39%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLVQ 188
+ +
Sbjct: 179 GPDTVHKCAE 188
>gi|219117749|ref|XP_002179664.1| ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217408717|gb|EEC48650.1| ribulose-phosphate 3-epimerase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 227
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVF 65
I PS+L+ D + + + + GA +H D+MDG FVPN+SFG VI SLR D+
Sbjct: 9 IAPSLLSCDLANIATDAKQMLDMGADWLHMDIMDGHFVPNLSFGPPVIASLREAIKDAYI 68
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSP---HIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+S+ + + AGC TFH ES + + + G K G+ I P TP
Sbjct: 69 DCHLMVSAPFKWVAPMKKAGCTSFTFHLESEMPEGGVPAMIEMVKDAGMKVGMVIKPGTP 128
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ L+ I +IDM+LIMTV PGF GQ + +PKI+ ++ +++++VDGGV+
Sbjct: 129 IENLDPFIPDIDMVLIMTVEPGFSGQSFMADMMPKIKYLRS--NYPNLNIQVDGGVSPST 186
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + +AGA+++V S+ F L
Sbjct: 187 IDAAAEAGANVIVAASAIFGSDDRQGVINALRA 219
>gi|229542782|ref|ZP_04431842.1| ribulose-phosphate 3-epimerase [Bacillus coagulans 36D1]
gi|229327202|gb|EEN92877.1| ribulose-phosphate 3-epimerase [Bacillus coagulans 36D1]
Length = 239
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 4/223 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ AD RL E I + +AG H DVMDG FVPN + G D IR++R +D
Sbjct: 3 KIGPSLMCADLGRLAENIKEMDEAGVDFYHLDVMDGLFVPNFTLGPDFIRTVRKLTDKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + I++ AD G D+I+ H E++ +++ +L I G K GVAINP TP+ +
Sbjct: 63 DTHLMIKQPERFIDLFADCGSDMISIHAEATDNLQGALARIKNKGLKAGVAINPATPLDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNI 183
L+ V D D +++MTVNPGF GQ+ I + KI + I + +I +EVDG + + I
Sbjct: 123 LDYVYDVTDYVVVMTVNPGFAGQKFIPAVYDKIARLHETITRNKFNIEIEVDGNIGASTI 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEI-SYAKRLNDLKKSALAID 224
+ + GA + V G S+ F ++G + +R +L + A++
Sbjct: 183 PACKENGATMYVCGTSAVFKKEGTLRENVERTRNLLDAHAAVN 225
>gi|68536088|ref|YP_250793.1| ribulose-phosphate 3-epimerase [Corynebacterium jeikeium K411]
gi|68263687|emb|CAI37175.1| ribulose-phosphate 3-epimerase [Corynebacterium jeikeium K411]
Length = 222
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 8/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + I PSILAADF+ L +E++ + A +H DVMD FVPN+SFG V +SL ++
Sbjct: 4 SRTPLIAPSILAADFANLAQEVARVPN--ADWLHIDVMDNHFVPNLSFGLPVAKSLLPHT 61
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAIN 118
D D HLMI + + AD +TFH E+ + ++ + G G++I
Sbjct: 62 DKHLDVHLMIENPEKWAEDYAD-DFHSVTFHLEAVADVDTAIALADKLRGHGTMAGISIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TPV L D +D D++L+M+V PGFGGQ+ + + K+R+ ++ I + +E+DG
Sbjct: 121 PNTPVEPLLDHLDRFDLVLVMSVEPGFGGQKFMPEVLDKVRKLRSRIDADGLDTLIEIDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
G+ + AG D+ V GSS F + + + K
Sbjct: 181 GIGAETAAESAAAGVDVFVAGSSVFGKPDPAAAVDEIRASAK 222
>gi|315925617|ref|ZP_07921827.1| ribulose-phosphate 3-epimerase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621158|gb|EFV01129.1| ribulose-phosphate 3-epimerase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 233
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 83/198 (41%), Positives = 110/198 (55%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I S+L+ADFSRLGE + AGA +H D+MDG FVPNI+ G D + LR FD
Sbjct: 22 ISISMLSADFSRLGEHLKQAEAAGADWLHVDIMDGHFVPNITMGPDQVAQLRGAVAIPFD 81
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ ++I A AG D IT H E L I G K V I+PETP + +
Sbjct: 82 VHLMITHPLAYIERFAKAGADTITVHVECDDDTDACLDLIEKCGVKPAVVISPETPASAV 141
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+D + M+L+M V+PGFGGQ I T K+ + +IG R + LE+DGGV + +
Sbjct: 142 APYLDRVRMVLVMGVHPGFGGQSYIPETTAKLAKLHEMIGGRPVRLEIDGGVNFDTLPEI 201
Query: 187 VQAGADLLVVGSSFFNQK 204
+ GAD +V GS F
Sbjct: 202 LTTGADTIVSGSCLFKGD 219
>gi|29840310|ref|NP_829416.1| ribulose-phosphate 3-epimerase [Chlamydophila caviae GPIC]
gi|29834659|gb|AAP05294.1| ribulose-phosphate 3-epimerase [Chlamydophila caviae GPIC]
Length = 231
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+ D + +G E I ++GA IH DVMDG FVPN++FG VI ++ +D +
Sbjct: 11 IAPSIMGGDLACIGAEAKKIEESGADLIHIDVMDGHFVPNLTFGPGVIAAINRSTDLFLE 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + I AG D + H E+S ++ L I G + G+A +PET + +
Sbjct: 71 VHAMIYTPFDFIEAFVKAGADRVIVHFEASEDLKELLAYIKKCGIQAGLAFSPETSIEFI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR----QAKALIGKRSISLEVDGGVTSRN 182
+ D++L+M+V+PGF GQ I KIR K + + S +EVDGG+ +
Sbjct: 131 PPFLPFCDVLLLMSVHPGFCGQGFIPDVPDKIRFTRQALKTMGLEDSCLIEVDGGINEAS 190
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +AGAD+LV S F QK ++ +++ L+
Sbjct: 191 AKECREAGADILVAASYMF-QKDALTMEEKVLLLR 224
>gi|160872679|ref|ZP_02062811.1| ribulose-phosphate 3-epimerase [Rickettsiella grylli]
gi|159121478|gb|EDP46816.1| ribulose-phosphate 3-epimerase [Rickettsiella grylli]
Length = 220
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 90/219 (41%), Positives = 132/219 (60%), Gaps = 6/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
I S+L+AD L E S + +AGA Q+H DVMD FVPN++FG + R+LR +
Sbjct: 1 MRRFIISASVLSADMGCLARESSAVLQAGADQLHIDVMDNHFVPNLTFGPLICRALRKHL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM++ +D+ I+ A AG + +TFHPE+S I ++L I +G K G+AINP+
Sbjct: 61 PNVFLDVHLMVNPVDALISAFAAAGANQMTFHPEASNDIVKNLNQIRRLGCKAGLAINPQ 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGV 178
T + +L + D +D +L+M+V+PGF Q I + KI AK L + K S L VDGGV
Sbjct: 121 TELTLLNNYWDHLDFVLMMSVHPGFAEQPFIPEVLNKISTAKQLLSLHKPSARLGVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
NI + +AGAD ++GS FN +Y+ LN+L+
Sbjct: 181 KKNNIAEIAKAGADTFILGSGIFNT---ANYSNTLNELR 216
>gi|301168572|emb|CBW28162.1| putative ribulose-phosphate 3-epimerase [Bacteriovorax marinus SJ]
Length = 216
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 70/216 (32%), Positives = 118/216 (54%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PS+LA DF + E++ H D+MD FVPN++FG +++ + +
Sbjct: 2 MIISPSLLACDFLNIESELNAFEGFEDLWFHLDIMDAHFVPNLTFGHPIVKLISKKTKIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H M+S+ + I D TFH E++ + ++ GV+I P+TP+
Sbjct: 62 LDAHFMVSNPEFFIETFKDFNIHNFTFHIEATENSFELIKKAKKYYPSVGVSIKPKTPLE 121
Query: 125 IL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVTSRN 182
+ +V+ ID++LIM+V PGFGGQ IE + +I L + +++++VDGGV++ N
Sbjct: 122 DISSEVLANIDLLLIMSVEPGFGGQAFIEESYERIEYFNKLKTQYPNLTIQVDGGVSNIN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L +AGAD LV GS F +G +Y +++ L++
Sbjct: 182 ADKLRKAGADNLVAGSYIFK-EGPTTYREKVESLRR 216
>gi|261749376|ref|YP_003257061.1| putative ribulose-phosphate 3-epimerase [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
gi|261497468|gb|ACX83918.1| putative ribulose-phosphate 3-epimerase [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 220
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PS+L+AD + L +I + ++ A H D+MD FV NISFG+ ++S++ Y++
Sbjct: 4 IIAPSLLSADLAFLYRDIKMLNESEADWYHIDIMDSSFVSNISFGSSFVKSVKKYANKNK 63
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + +I G D + H E+ H+ R++ +I G K G+A+NP TPV
Sbjct: 64 SMDVHLMIMQPERYIEQFKVCGADHLHIHYEACIHLNRTIFSIKKSGMKVGIAVNPHTPV 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+L+D+I +ID +L+M+VNPGF GQ+ I+ T K+ K LI K+ S +EVDGGV
Sbjct: 124 YLLQDIIQDIDFVLLMSVNPGFSGQKFIKKTYQKLEDTKDLILKKHSSALIEVDGGVNLE 183
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N L + GAD+LV G++ F+ + R+
Sbjct: 184 NASLLFKNGADILVAGTTIFSNENPQKMIHRMK 216
>gi|329942900|ref|ZP_08291679.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci Cal10]
gi|332287493|ref|YP_004422394.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci 6BC]
gi|313848072|emb|CBY17070.1| putative epimerase [Chlamydophila psittaci RD1]
gi|325506758|gb|ADZ18396.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci 6BC]
gi|328815160|gb|EGF85149.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci Cal10]
gi|328914741|gb|AEB55574.1| ribulose-phosphate 3-epimerase [Chlamydophila psittaci 6BC]
Length = 231
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 114/215 (53%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+ D + +G E I ++GA IH DVMDG FVPN++FG VI ++ +D +
Sbjct: 11 IAPSIMGGDLACIGAEAKRIEESGADLIHIDVMDGHFVPNLTFGPGVIAAINRSTDIFLE 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + + +G D I H E+S ++ L I G + G+A +PET + +
Sbjct: 71 VHAMIYTPFDFVEEFVKSGADRIIVHFEASEDLKELLSYIKKCGIQAGLAFSPETSIEFI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVTSRN 182
+ D+IL+M+V PGF GQ I KIR K I + +EVDGG+ +
Sbjct: 131 PPFLPFCDVILLMSVRPGFCGQGFIPDIPDKIRFTKQAIKTMGLEDSCLIEVDGGINETS 190
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +AGAD+LV S F +K E + +++ L+
Sbjct: 191 AKLCREAGADILVAASYMF-EKNEQTMEEKVLLLR 224
>gi|297588344|ref|ZP_06946987.1| ribulose-phosphate 3-epimerase [Finegoldia magna ATCC 53516]
gi|297573717|gb|EFH92438.1| ribulose-phosphate 3-epimerase [Finegoldia magna ATCC 53516]
Length = 216
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 94/201 (46%), Positives = 139/201 (69%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
+ PS+LA +F L + + + G K +H DVMDG FVPNISFG +I+ +R Y + +
Sbjct: 4 LSPSLLACNFFELEKNLDILKNNGIKYLHLDVMDGNFVPNISFGPAIIKQIREKYPEFIL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM++ ++ I+ + +AG DIITFHPES+ H R ++T+H GKK G+A+NP T +
Sbjct: 64 DCHLMVNKPENIIDDMLNAGADIITFHPESTFHPHRIIQTVHKAGKKCGLALNPSTGLEC 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
E +ID++D+IL+M+VNPGFGGQ IES KI+ A+ +I ++ I LEVDGGV + N+
Sbjct: 124 CEYIIDDLDIILVMSVNPGFGGQSFIESQHSKIKDARKMIEKSQKDIILEVDGGVKTSNV 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
++++GA+L+V GS FNQ
Sbjct: 184 DKVLESGANLIVSGSDVFNQN 204
>gi|260437311|ref|ZP_05791127.1| ribulose-phosphate 3-epimerase [Butyrivibrio crossotus DSM 2876]
gi|292810223|gb|EFF69428.1| ribulose-phosphate 3-epimerase [Butyrivibrio crossotus DSM 2876]
Length = 219
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 78/212 (36%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+L+ADF+++GE++ I AG + +H D+MDG FVP+ISFG V+ S+R +D +FD
Sbjct: 5 LSPSMLSADFTKVGEQLKIIENAGNEMLHVDIMDGMFVPSISFGMPVVESIRPCTDMIFD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+ + +I ++ +G DII+ H E+ +I +L I G K +AINPETP+ L
Sbjct: 65 VHMMVVDPERYIEVVRKSGADIISIHVEACKNIIDTLLKIRETGAKPAIAINPETPMDTL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
+ +D +++M+V+PGFGGQ IE + +I + + +S +EVDGG+ N++
Sbjct: 125 RPYLQYVDEVVVMSVHPGFGGQSFIEESFERICELDRMRKDLGLSFAIEVDGGIKLDNVE 184
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+++ GAD++V GS+ F ++ N++
Sbjct: 185 KVLKCGADIIVAGSAVFK-DDIADNVRKFNEI 215
>gi|304317332|ref|YP_003852477.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778834|gb|ADL69393.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 221
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P+ I PSIL+A+F + ++I + K IH DVMDG FVPNI+FG D IR++R
Sbjct: 1 MNPT--INPSILSANFCNIEKDIKILEKNSITSIHIDVMDGNFVPNIAFGIDQIRAIREI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ FD HLMI+ D I DAG D IT H E+ PH+ R++ I G G+A+NP
Sbjct: 59 TEMKFDIHLMINDPDKFIERFVDAGADNITVHAEACPHLYRTIELIKKYGVSVGIALNPA 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + L + ID +LIMTV PGFGGQ IE K++ + K + + ++VDGG+
Sbjct: 119 TSIESLRYLYKLIDKVLIMTVEPGFGGQNFIEEMKNKLKDLVTIKEKYNYNFSIQVDGGI 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ N++ +V+ G +V+GSS F K +
Sbjct: 179 SKDNVEEIVKLGVTDVVIGSSIFKNNEIEKNLKEI 213
>gi|94676944|ref|YP_588501.1| ribulose-phosphate 3-epimerase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94220094|gb|ABF14253.1| ribulose-phosphate 3-epimerase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 231
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 89/188 (47%), Positives = 127/188 (67%), Gaps = 3/188 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I+PSIL+A+F+RLGE+I + AGA IHFDVMD +VPN++ G V+ +LR Y
Sbjct: 3 MKKFLIIPSILSANFARLGEDIVRVISAGADVIHFDVMDNHYVPNLTMGPMVLNALREYG 62
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +D I A AG + ITFHPE+S HI RSL+ I + + G+A+NP
Sbjct: 63 ITIPVDVHLMVKPVDKLIADFAAAGANYITFHPEASEHIERSLQMIKELNCQAGLAMNPA 122
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
T + LE +ID++D+IL+M+VNPGFGGQ + T+ KI+QA+ +I + ++++ EVDGGV
Sbjct: 123 TSLYCLEYIIDKVDIILLMSVNPGFGGQSFLPMTLKKIQQARKIIDQNNLNIRLEVDGGV 182
Query: 179 TSRNIKSL 186
T NI S+
Sbjct: 183 TLENIGSI 190
>gi|167750676|ref|ZP_02422803.1| hypothetical protein EUBSIR_01653 [Eubacterium siraeum DSM 15702]
gi|167656355|gb|EDS00485.1| hypothetical protein EUBSIR_01653 [Eubacterium siraeum DSM 15702]
Length = 215
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I S+LA+D + + +EI A + +H DVMDG FV NI++G +V+ ++R SD F
Sbjct: 4 IISASMLASDLTNIEKEIHRTENAQVEWLHIDVMDGVFVDNITYGNNVVAAMRKVSDIYF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ + I + A AG +++T H ES + +L+ I G G+AI P T
Sbjct: 64 DTHLMVTDPTNLIPLFALAGSNMLTIHLESKGNTTANLKYIKKSGMNAGLAIKPATDWKE 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSRN 182
+ + DM+L+MTV PG+GGQ I K+ + + ++VDGG+ +
Sbjct: 124 VIPYLPLCDMVLVMTVEPGYGGQGFIPQCADKVAMLRKYCNENGFDKMNIQVDGGINTAT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ AGA++LV G+ F + A +
Sbjct: 184 AATVKDAGANVLVAGTYLFRAVDMKAAADAIR 215
>gi|323450909|gb|EGB06788.1| hypothetical protein AURANDRAFT_28711 [Aureococcus anophagefferens]
Length = 234
Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 127/228 (55%), Gaps = 12/228 (5%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
QI+PS+L ADF+ LG + + + +AG +I FDVMDG FVPN++FG DVI + R +
Sbjct: 1 RPTQIIPSVLPADFAALGIDCTKLEEAGCDRIQFDVMDGNFVPNLTFGPDVIAAQRKTTK 60
Query: 63 SVFDCHLMISS--IDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+F+ LM+S D+ + + ++ H E+ H+ R+L I AMG
Sbjct: 61 LMFETQLMVSERCTDAMLPQFTECTKGPNGEPGVVIVHAEACTHLHRALSNIRAMGGSPS 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISL 172
VA+NP TP +++V+D +D +L+MTVNPGFGGQ I + KIR+ + I R + +
Sbjct: 121 VALNPSTPAEAIDNVLDLVDHVLVMTVNPGFGGQAYIPTMTDKIRKIRKWIVDRELDVDI 180
Query: 173 EVDGGV--TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
EVDGG+ + I + QAGA+ + GS F K L + +
Sbjct: 181 EVDGGIKASPETIGACAQAGANCFIAGSGLFAYGDMSQGVKELRAIAE 228
>gi|150021401|ref|YP_001306755.1| ribulose-phosphate 3-epimerase [Thermosipho melanesiensis BI429]
gi|149793922|gb|ABR31370.1| Ribulose-phosphate 3-epimerase [Thermosipho melanesiensis BI429]
Length = 214
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 123/213 (57%), Gaps = 3/213 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SILAA+ L EE+ + +IH DVMDG FVPN++FG +I +++ ++
Sbjct: 2 VKLSGSILAANLLNLKEELKRVENL-IDEIHIDVMDGHFVPNLTFGFPLISAVKEVTNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+++ + HI + D IT H ES+ HI R++ I + V +NP TP+
Sbjct: 61 IDVHLMVTNPEFHIEKLLDYDIQRITVHIESTHHIHRAITKIKENNIEAFVTLNPGTPLV 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRN 182
+E+VI ID +L+M+VNPGF GQ+ I +I KI+ K + S+ VDGGV N
Sbjct: 121 FIEEVIPYIDGVLVMSVNPGFSGQKFIAKSIEKIKTLNNWKQKHGMNYSIAVDGGVNDSN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ AGA++L++G F +++K+L
Sbjct: 181 ADVIISAGANILIMGYGIFKNPELENFSKQLRK 213
>gi|330466986|ref|YP_004404729.1| ribulose-phosphate 3-epimerase [Verrucosispora maris AB-18-032]
gi|328809957|gb|AEB44129.1| ribulose-phosphate 3-epimerase [Verrucosispora maris AB-18-032]
Length = 226
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 82/223 (36%), Positives = 122/223 (54%), Gaps = 4/223 (1%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT P + + PSILAADF+RL EE+ + A A +H DVMD FVPN++ G V++SLR+
Sbjct: 1 MTVPPLIVAPSILAADFARLAEEVRAVENA-ADWLHVDVMDNHFVPNLTIGLPVVQSLRA 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ FD HLMI ADAG +TFH E+ + + A G K G+AI+
Sbjct: 60 ATELPFDVHLMIEDPQRWAPGYADAGAYNVTFHAEACDDPVALAKDLRAAGAKAGLAIDR 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
+TP+ D++ D +L+MT+ GFGGQ+ I + K+R + + +EVDGG
Sbjct: 120 DTPIEPYLDLLPNFDTLLVMTIKAGFGGQRFIPQLLDKVRAVRRHRDAGHLELRIEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + I+ AGAD V G++ + +RL L + A
Sbjct: 180 IAADTIEQAAAAGADAFVAGTAVYGADDPAEAVRRLRQLAERA 222
>gi|154271280|ref|XP_001536493.1| hypothetical protein HCAG_08275 [Ajellomyces capsulatus NAm1]
gi|150409163|gb|EDN04613.1| hypothetical protein HCAG_08275 [Ajellomyces capsulatus NAm1]
Length = 235
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 128/230 (55%), Gaps = 17/230 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG S++ K+ + IH D+MDG FVPNI+FGA V+ +R +
Sbjct: 1 MSPPTIIAPSILSADFAALGAACSDLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRRH 60
Query: 61 --------SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGK 111
FDCH+MI+ + AGCD+ FH E++ T + +
Sbjct: 61 VARPSNPGGKGTFDCHMMIAEPQKWVTQFKGAGCDLYCFHYEAAMTSTAAKDPTDTSTTR 120
Query: 112 KTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
+T I P+TPV +L D++++ DM+L+MTV PGFGGQ+ + S +PK+ + +
Sbjct: 121 RTSPTIKPDTPVDVLWDILEQEDPLDRPDMVLVMTVYPGFGGQKFMASELPKVNALR--V 178
Query: 166 GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+++EVDGG+ ++ +AGA+++V GS+ F + L +
Sbjct: 179 KYPHLNIEVDGGLGEDTVEQAAEAGANVIVAGSAVFGARDPAQAIATLRE 228
>gi|260578783|ref|ZP_05846690.1| ribulose-phosphate 3-epimerase [Corynebacterium jeikeium ATCC
43734]
gi|258603081|gb|EEW16351.1| ribulose-phosphate 3-epimerase [Corynebacterium jeikeium ATCC
43734]
Length = 222
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 76/222 (34%), Positives = 119/222 (53%), Gaps = 8/222 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + I PSILAADF+ L +E++ + A +H DVMD FVPN+SFG V +SL ++
Sbjct: 4 SRTPLIAPSILAADFANLAQEVARVPN--ADWLHIDVMDNHFVPNLSFGLPVAKSLLPHT 61
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAIN 118
D D HLMI + + AD +TFH E+ + ++ + G G++I
Sbjct: 62 DKHLDVHLMIETPEKWAEDYAD-DFQSVTFHLEAVADVDTAIALADKLRGHGTMAGISIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P TPV L D +D D++L+M+V PGFGGQ+ + + K+R+ ++ I + +E+DG
Sbjct: 121 PNTPVEPLLDHLDRFDLVLVMSVEPGFGGQKFMPEVLDKVRKLRSRIDADGLDTLIEIDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
G+ S AG D+ V GSS F ++ + + K
Sbjct: 181 GIGSETAAESAAAGVDVFVAGSSVFGKEDPAAAVDEIRASAK 222
>gi|328866250|gb|EGG14635.1| ribulose phosphate 3-epimerase [Dictyostelium fasciculatum]
Length = 256
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 80/246 (32%), Positives = 131/246 (53%), Gaps = 34/246 (13%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMD--------------------G 41
T I PS+L++DF+ L + +++ GA +H DVM
Sbjct: 5 TLKPIICPSLLSSDFAFLARDANHMLDCGADWLHMDVMFKQLSVTITYTPIYLSFCLFFS 64
Query: 42 CFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH--- 98
FVPN++ GA VI+SLR ++ DCHLM+++ ++ I+ +AG D ITFH E++ +
Sbjct: 65 HFVPNLTIGAPVIKSLRKHTKGHLDCHLMVTNPETLIDDFKNAGADGITFHIEATANRAG 124
Query: 99 ----IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE----IDMILIMTVNPGFGGQQL 150
++ I A G + G++I P+TPV +L +D+ +D ILIMTV PGFGGQ
Sbjct: 125 GVDITADVIKKIKAAGMQCGISIKPKTPVDVLFPFLDDSVNIVDFILIMTVEPGFGGQSF 184
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN-QKGEISY 209
++ +PK+ + +++++VDGG+ I + QAGA+++V GSS F +
Sbjct: 185 MQDMMPKVSTLRQRY--PNLNIQVDGGIDPNTIGTAAQAGANIVVAGSSLFKPGQDPKDT 242
Query: 210 AKRLND 215
+ D
Sbjct: 243 IQLFKD 248
>gi|153206256|ref|ZP_01945519.1| ribulose-phosphate 3-epimerase [Coxiella burnetii 'MSU Goat Q177']
gi|161830694|ref|YP_001597690.1| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 331]
gi|120577386|gb|EAX34010.1| ribulose-phosphate 3-epimerase [Coxiella burnetii 'MSU Goat Q177']
gi|161762561|gb|ABX78203.1| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 331]
Length = 222
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 135/222 (60%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M I I SIL+ADFSRLGEE+ ++ +AGA IHFDVMD FVPN+SFGA V ++LR
Sbjct: 1 MNKKI-ISASILSADFSRLGEEVKSVIQAGADNIHFDVMDHHFVPNLSFGAVVCKALRDA 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ + + I A+AG ++ITFHPE+ + ++ I G + G+A NP
Sbjct: 60 KITAPIDVHLMVKNPNEFIKPFAEAGANLITFHPETVKDVEDTIARIKKAGMQVGMAFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
E +++ + +ID++L+M+VNPGF GQ + ++ KI + L+ + L +DGG
Sbjct: 120 EKSLSLFTSFLTKIDLVLLMSVNPGFAGQSFMAESLKKIAATRQLLDTLQSKAFLGIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + +AGAD VVGS F+ Y ++L +++ +
Sbjct: 180 IKINNIADVSRAGADFFVVGSGLFHSSN---YEEKLKEMRHA 218
>gi|324513360|gb|ADY45493.1| Ribulose-phosphate 3-epimerase [Ascaris suum]
Length = 251
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 128/226 (56%), Gaps = 13/226 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY--SDS 63
I PSIL AD S L E + AGA +H DVMDG FVPN+SFG ++ LR+ +
Sbjct: 28 IICPSILNADLSNLAAECQRLLVAGADYLHLDVMDGHFVPNLSFGHPIVECLRANLGPEP 87
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES------SPHIRRSLRTIHAMGKKTGVAI 117
FD HLM+++ + + + +AG + TFH E+ + ++R + G K G+AI
Sbjct: 88 FFDVHLMVTNPEQWLIPMQEAGANQFTFHWEAVHAKGGDDAVYAAIRAVRRAGLKVGLAI 147
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
P+TPV + ++ID L+MTV PGFGGQ+ + +PK+RQ + ++++VDGG
Sbjct: 148 KPKTPVQTVLQFANDIDNALVMTVEPGFGGQKFMSDMMPKVRQIRDR--HPHLNIQVDGG 205
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V N++ +AGA+L+V G+ + K ++++++ LA
Sbjct: 206 VNIDNVEVCAEAGANLIVSGTGVIKVPDQ---KKVISEMREKVLAA 248
>gi|283769594|ref|ZP_06342490.1| ribulose-phosphate 3-epimerase [Bulleidia extructa W1219]
gi|283103862|gb|EFC05248.1| ribulose-phosphate 3-epimerase [Bulleidia extructa W1219]
Length = 209
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 8/215 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSILA +R +++ + ++ A+ IH D+MDG FVPN+S+G V++ LRS S
Sbjct: 1 MKIAPSILAIQMNRFSQQMDELNQSSAEWIHIDIMDGHFVPNLSYGPHVVKGLRSSSHKF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPETP 122
FD HLM+S + N AG D ITFH E+ I + +H G K G++I P TP
Sbjct: 61 FDVHLMVSDPIFYANAFIKAGADAITFHVEALKKEEIVPFIHQLHQQGVKVGISIKPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
V+ +E+ + +D++L+M+V PGFGGQ + + KI Q + +EVDGG+
Sbjct: 121 VSAIEEYLSLVDIVLVMSVEPGFGGQSFMPMALDKIEQLARRSE--NFEIEVDGGIDQET 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ GA +LV GS F K E +R+ L+
Sbjct: 179 GYLCKEKGATVLVAGSYIFKGKIE----ERVQSLR 209
>gi|304317329|ref|YP_003852474.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778831|gb|ADL69390.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 219
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+ SI+ A+ L E+ + A +H DVMDG FV N++ G VI ++ ++
Sbjct: 2 IRFAASIMCANQLELKNELKRLEDAHIDMLHCDVMDGVFVNNLAMGPYVIERIKEFTKIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H + I + + I+FH E++ + +R I G K +AI+P+T +
Sbjct: 62 LDIHFATVEPEKFIKMFLHIKPEFISFHAETTKDYYKIVRLIKDEGIKASIAISPDTSID 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+++ V+ ++DM+LIMTVNPGF GQ I KI++ K + I+ +EVDG + +
Sbjct: 122 VIKSVLKDLDMVLIMTVNPGFSGQSFRSYVIEKIKRVKEICSNEGINPLIEVDGSINEKT 181
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKS 219
I +++AGA++LV+G SS FN K + Y+ + ++K S
Sbjct: 182 IPKVIEAGANVLVLGTSSIFNTKT-VDYSYYIRNIKNS 218
>gi|282855984|ref|ZP_06265275.1| ribulose-phosphate 3-epimerase [Pyramidobacter piscolens W5455]
gi|282586203|gb|EFB91480.1| ribulose-phosphate 3-epimerase [Pyramidobacter piscolens W5455]
Length = 227
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 123/218 (56%), Gaps = 4/218 (1%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YS 61
I PSIL+AD +G I + K +H DVMDG FVPN+S+G ++++LR Y
Sbjct: 8 KPFLIAPSILSADPLAVGASIDAL-KNDFDWLHVDVMDGHFVPNLSYGPAIVKALRRRYP 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D+V D HLM+ + +++ ++ D + H E+ H+ R+L I A G + GVA+NP T
Sbjct: 67 DAVIDVHLMVEPGEDFLDMFLESRPDYLVVHQEACRHLHRALSKIAAAGVRPGVALNPAT 126
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV +++ V++ D++L+M+VNPGFGGQ I K L R + +E+DGG+
Sbjct: 127 PVELIKPVLNIADVVLLMSVNPGFGGQSFIPEVTEKAIALCQLREARGLEFLIEMDGGIG 186
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ N+ + + G D+ V+GS+ F + ++ L
Sbjct: 187 AANVAQVRRCGVDVAVMGSAVFGTADPAATVAKMRLLA 224
>gi|291533255|emb|CBL06368.1| ribulose-phosphate 3-epimerase [Megamonas hypermegale ART12/1]
Length = 224
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ + PSILAADFS L +++ + ++G K +H DVMDG FV NI+FG D+I+ LR
Sbjct: 2 MKMTVVLSPSILAADFSCLADDVKRLEQSGIKDLHLDVMDGHFVSNITFGIDLIKHLRPK 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ FD HLM+++ D +N + +AG + +T H E+ H+ ++ TI+ +G + GV +NP
Sbjct: 62 TKMNFDAHLMVTNPDVLLNGLKEAGVNSVTVHVEACKHLYHTVETINKLGMQGGVVLNPS 121
Query: 121 TPVAILEDVIDE--IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
T L+ + + I +L+M+V PGFGGQ + + KI+ + + + ++VDG
Sbjct: 122 TNFESLKYMAENNIIKKVLVMSVEPGFGGQAYLPMSTKKIKDLANWRDENNYNFIIQVDG 181
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
G+ NI+++V AGA +V+GSS F + K + D +K
Sbjct: 182 GINLNNIQTVVDAGATDIVIGSSIFKHRELE---KNVADFRK 220
>gi|188495855|ref|ZP_03003125.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli 53638]
gi|194437192|ref|ZP_03069290.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli 101-1]
gi|188491054|gb|EDU66157.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli 53638]
gi|194423748|gb|EDX39737.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli 101-1]
Length = 242
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 74/214 (34%), Positives = 114/214 (53%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 11 NMKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATK 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETP
Sbjct: 70 PLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETP 129
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
V ++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 130 VEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQ 189
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 190 ATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 223
>gi|255547345|ref|XP_002514730.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
gi|223546334|gb|EEF47836.1| ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
Length = 264
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 80/226 (35%), Positives = 128/226 (56%), Gaps = 25/226 (11%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ V I+ G V+ +LR +
Sbjct: 56 KSDIIVSPSILSANFAKLGEQVKA------------------VXXITIGPLVVDALRPVT 97
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI + + AG DI++ H E S+ H+ R++ I ++G K GV +NP
Sbjct: 98 DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNP 157
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ ++ V+D +D++LIM+VNPGFGGQ IES + KI + L ++ ++ +EVDGG
Sbjct: 158 ATPLSAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGG 217
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
V +N +++AGA+ LV GS+ F K YA+ + +K S +
Sbjct: 218 VGPKNAYKVIEAGANALVAGSAVFGAKD---YAEAIKGIKNSKRPV 260
>gi|291515117|emb|CBK64327.1| ribulose-5-phosphate 3-epimerase [Alistipes shahii WAL 8301]
Length = 208
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 80/205 (39%), Positives = 126/205 (61%), Gaps = 2/205 (0%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+L+ADF L + + + A+ +H DVMDG FVPNISFG V++++R + D HLM
Sbjct: 1 MLSADFGHLERDTRMVDASAAEWVHIDVMDGVFVPNISFGFPVLKAIRKATAKFLDVHLM 60
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
I S + ++ A+AG D++TFH E++ + I G K GV+I P TPV L +V+
Sbjct: 61 IVSPEKYVARFAEAGADLVTFHLEATDDPAGCVALIRRAGAKAGVSIKPATPVEALREVL 120
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQ 188
+D++L+M+V PGFGGQ I ++ KI Q +A+ + + +EVDGG+++RN ++
Sbjct: 121 PLVDLVLVMSVEPGFGGQSFIPGSLEKIAQLRAMAREMGLETIIEVDGGISARNAGAVYG 180
Query: 189 AGADLLVVGSSFFNQKGEISYAKRL 213
AGAD+LV GSS F + + ++
Sbjct: 181 AGADVLVAGSSVFGAEDPQAEVVKM 205
>gi|32471487|ref|NP_864480.1| ribulose-phosphate 3-epimerase [Rhodopirellula baltica SH 1]
gi|32443328|emb|CAD72161.1| Ribulose-phosphate 3-epimerase [Rhodopirellula baltica SH 1]
Length = 235
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 124/213 (58%), Gaps = 5/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PS+L DF L EI +T AG + +H DVMDG FVPN+++G ++ LR ++D D
Sbjct: 16 ILPSLLQCDFGDLRTEIEKLTVAGTRVLHLDVMDGHFVPNLTYGMPIVEGLRRHTDMPLD 75
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMIS ++ + DAG D++TFH E+ I MG GVAINP+T A L
Sbjct: 76 VHLMISDPIAYAQPMVDAGADLLTFHVEAVDDCVEVAGKIRDMGVGVGVAINPDTDFAKL 135
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ +D +DM+L+M+VN GFGGQQ + ++R K K + LE+DGG+ + I
Sbjct: 136 DCCLDSVDMVLVMSVNAGFGGQQFNPVALDRLRSLKER--KPDLLLEIDGGIKAETIGDA 193
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AG DL VVGS+ F Q Y +N+L ++
Sbjct: 194 RAAGCDLFVVGSAIFGQHD---YETAINELTQA 223
>gi|324112169|gb|EGC06147.1| ribulose-phosphate 3-epimerase [Escherichia fergusonii B253]
Length = 231
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKIAPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I+ +A AG + IT HPE+ + R + I +G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYISQLAQAGANFITLHPETINGQAFRLIDEIRRLGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + KI + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLNKIAELKAWREREGLHYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
L+ AGAD+ +VG S FN I+ A ++
Sbjct: 180 TYDRLIAAGADVFIVGTSGLFNHADNITDAWQV 212
>gi|296127820|ref|YP_003635072.1| ribulose-phosphate 3-epimerase [Brachyspira murdochii DSM 12563]
gi|296019636|gb|ADG72873.1| ribulose-phosphate 3-epimerase [Brachyspira murdochii DSM 12563]
Length = 216
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 130/211 (61%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I I PSIL A FS L I + +AG+ +H D+MDG FVP I+FGA ++ ++ S
Sbjct: 3 KIMIAPSILTASFSNLENTIKELEEAGSDYLHLDIMDGVFVPQITFGAKIVSDIKKASRI 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + + HI+ A AG DII+ H E + HI R + I A K G+ +NP T V
Sbjct: 63 PLDVHLMIVNPEKHIDDFAKAGADIISVHYEGNIHIHRLIYQIKAHNIKAGIVLNPHTRV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+E +ID+ID ILIM+VNPGFGGQ+ IES++ KI++AK LIG R I L VDGG+
Sbjct: 123 DFIEPIIDDIDYILIMSVNPGFGGQKFIESSVKKIKEAKKLIGNRDIVLAVDGGINLNTC 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++AGA+ LV GS+ + + +L
Sbjct: 183 NMVIEAGANFLVAGSAIIDSDNKKDTINKLR 213
>gi|165919287|ref|ZP_02219373.1| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 334]
gi|165917010|gb|EDR35614.1| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 334]
Length = 222
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M I I SIL+ADFSRLGEE+ ++ +AGA IHFDVMD FVPN+SFGA V ++LR
Sbjct: 1 MNKKI-ISASILSADFSRLGEEVKSVIQAGADNIHFDVMDHHFVPNLSFGAVVCKALRDA 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ + + I A+AG ++ITFHPE+ + ++ I G + G+A NP
Sbjct: 60 KITEPIDVHLMVKNPNEFIKPFAEAGANLITFHPETVKDVEDTIARIKKAGMQVGMAFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
E +++ + +ID++L+M+VNPGF GQ + ++ KI + L+ + L +DGG
Sbjct: 120 EKSLSLFTSFLTKIDLVLLMSVNPGFAGQSFMAESLKKIAATRQLLDTLQSKAFLGIDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + +AGAD VVGS F+ Y ++L +++ +
Sbjct: 180 IKINNIADVSRAGADFFVVGSGLFHSSN---YEEKLKEMRHA 218
>gi|209363677|ref|YP_001423535.2| ribulose-phosphate 3-epimerase [Coxiella burnetii Dugway 5J108-111]
gi|212211897|ref|YP_002302833.1| ribulose-phosphate 3-epimerase [Coxiella burnetii CbuG_Q212]
gi|212217847|ref|YP_002304634.1| ribulose-phosphate 3-epimerase [Coxiella burnetii CbuK_Q154]
gi|215919281|ref|NP_820849.2| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 493]
gi|206584165|gb|AAO91363.2| ribulose-phosphate 3-epimerase [Coxiella burnetii RSA 493]
gi|207081610|gb|ABS77359.2| ribulose-phosphate 3-epimerase [Coxiella burnetii Dugway 5J108-111]
gi|212010307|gb|ACJ17688.1| ribulose-phosphate 3-epimerase [Coxiella burnetii CbuG_Q212]
gi|212012109|gb|ACJ19489.1| ribulose-phosphate 3-epimerase [Coxiella burnetii CbuK_Q154]
Length = 231
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 135/222 (60%), Gaps = 7/222 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M I I SIL+ADFSRLGEE+ ++ +AGA IHFDVMD FVPN+SFGA V ++LR
Sbjct: 10 MNKKI-ISASILSADFSRLGEEVKSVIQAGADNIHFDVMDHHFVPNLSFGAVVCKALRDA 68
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ + + I A+AG ++ITFHPE+ + ++ I G + G+A NP
Sbjct: 69 KITAPIDVHLMVKNPNEFIKPFAEAGANLITFHPETVKDVEDTIARIKKAGMQVGMAFNP 128
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
E +++ + +ID++L+M+VNPGF GQ + ++ KI + L+ + L +DGG
Sbjct: 129 EKSLSLFTSFLTKIDLVLLMSVNPGFAGQSFMAESLKKIAATRQLLDTLQSKAFLGIDGG 188
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ NI + +AGAD VVGS F+ Y ++L +++ +
Sbjct: 189 IKINNIADVSRAGADFFVVGSGLFHSSN---YEEKLKEMRHA 227
>gi|218551502|ref|YP_002385294.1| allulose-6-phosphate 3-epimerase [Escherichia fergusonii ATCC
35469]
gi|218359044|emb|CAQ91704.1| allulose-6-phosphate 3-epimerase [Escherichia fergusonii ATCC
35469]
Length = 228
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKIAPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I+ +A AG + IT HPE+ + R + I +G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYISQLAQAGANFITLHPETINGQAFRLIDEIRRLGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + KI + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLNKIAELKAWREREGLHYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
L+ AGAD+ +VG S FN I+ A ++
Sbjct: 180 TYDRLIAAGADVFIVGTSGLFNHADNITDAWQV 212
>gi|56417213|ref|YP_154287.1| ribulose-phosphate 3-epimerase [Anaplasma marginale str. St.
Maries]
gi|222475577|ref|YP_002563994.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Florida]
gi|56388445|gb|AAV87032.1| ribulose-phosphate 3-epimerase [Anaplasma marginale str. St.
Maries]
gi|222419715|gb|ACM49738.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Florida]
Length = 260
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 2/217 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + SIL+ADF+ L ++ + AG +H DVMDGCFVPN++ G VI ++ +
Sbjct: 44 AKGVVVSASILSADFANLSASVAAVEAAGVDWLHVDVMDGCFVPNLTVGPVVIAGIKKCT 103
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLM+ + H+ + DAG DIIT H ES H+ R +R + + GKK GV++ P+T
Sbjct: 104 RLVLDVHLMVQTPALHLRSVIDAGADIITVHAESDVHLYRFVREVKSHGKKVGVSLVPKT 163
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
+ LE VI E+D++L+M+V+PGF GQ+ + S + KI + + ++ K S+ + VDGGVT
Sbjct: 164 HHSALEYVIHELDLVLVMSVDPGFAGQEFLTSQLRKIEKIRTMVEKYSLPTKISVDGGVT 223
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ N+ S+V AGAD++VVG+S F + L
Sbjct: 224 TENVGSIVNAGADVVVVGTSLFKSANMYKVVQALKSF 260
>gi|116328324|ref|YP_798044.1| Pentose-5-phosphate-3-epimerase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331050|ref|YP_800768.1| Pentose-5-phosphate-3-epimerase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116121068|gb|ABJ79111.1| Pentose-5-phosphate-3-epimerase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124739|gb|ABJ76010.1| Pentose-5-phosphate-3-epimerase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 215
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 84/215 (39%), Positives = 127/215 (59%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA + LGE + + + +H DVMDG FVP ISFG + + +++ +
Sbjct: 1 MKISASILATKLTELGETVPHYDPSAIDLMHMDVMDGNFVPQISFGEALSKEVKALTTIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+S ++H+ + ITFH E++ R + I + G K GV++NP T V+
Sbjct: 61 LDVHLMVSKPENHVPKYYELNPYCITFHIETTDFPVRLAQEIKSYGTKVGVSLNPGTSVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE+V+ +D++L+MTV PGF GQ+ I + + KIR+AK LI R I LEVDGGV NI+
Sbjct: 121 TLENVLPYVDLVLLMTVEPGFYGQKFIVNGMEKIRKAKELIHTRPIELEVDGGVNDTNIQ 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L + G D++VVG+ + + A+ L L K
Sbjct: 181 ELKKNGVDIVVVGAGLYKTGKPMDNARNLKSLAKQ 215
>gi|123968361|ref|YP_001009219.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str.
AS9601]
gi|123198471|gb|ABM70112.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str.
AS9601]
Length = 251
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 133/230 (57%), Gaps = 14/230 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 13 NRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYC 72
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ F+ LM+S + ++ + A ++ H E++ H+ R L I +G
Sbjct: 73 NVPFETQLMVSQYNCETMLESYVKATKGPNGEPGVVIAHAEANIHLHRVLGRIRDLGGSP 132
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS-- 171
VA+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + I ++++
Sbjct: 133 SVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREIRNFIIEKNLDVD 192
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+EVDGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 193 IEVDGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|149276243|ref|ZP_01882387.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Pedobacter sp. BAL39]
gi|149232763|gb|EDM38138.1| ribulose-phosphate 3-epimerase (D-ribulose-5-phosphate 3-epimerase)
[Pedobacter sp. BAL39]
Length = 223
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 84/183 (45%), Positives = 123/183 (67%), Gaps = 2/183 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L+ADF+ L +I I + A H DVMDG FVPNISFG V+ +++ Y+ D
Sbjct: 5 IAPSVLSADFANLQRDIEMINSSAADWFHVDVMDGVFVPNISFGFPVMEAIKKYATKPLD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + D +I A AG +IT H E+ H+ R++++IHA G K GVAINP TPV++L
Sbjct: 65 VHLMIVNPDQYIERFAAAGAHLITVHYEACIHLHRTVQSIHAAGCKAGVAINPHTPVSLL 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
D++ ++D++L+M+VNPGFGGQ+ I +T K+R+ KA+ + + +EVDGGV N+
Sbjct: 125 RDILPDLDLVLVMSVNPGFGGQKFIPNTYNKLRELKAMANDLNPELIIEVDGGVGIHNLG 184
Query: 185 SLV 187
L+
Sbjct: 185 ELI 187
>gi|150401926|ref|YP_001325692.1| ribulose-phosphate 3-epimerase [Methanococcus aeolicus Nankai-3]
gi|150014629|gb|ABR57080.1| Ribulose-phosphate 3-epimerase [Methanococcus aeolicus Nankai-3]
Length = 219
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SIL+AD+ L EEI + +AG IH D+MDG FVPN+S G + + + ++
Sbjct: 2 VKVGASILSADYGHLKEEIKKVEEAGVDFIHIDMMDGHFVPNLSMGIGISKYVSEITNLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +A+ D+I+FH E+ R +R + G K +A+NP TP+
Sbjct: 62 IDVHLMVEHPEKFSLALAE-EADMISFHIEACKFPFRMVRLLKESGVKPIIALNPSTPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E ++D + IL+MTV PGF GQ + + KI + K I + VDGG+ ++
Sbjct: 121 TVEYILDYVHGILVMTVEPGFSGQSFMNPMLKKIDKLKTTILAEGYDTEIYVDGGINAKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V+AGAD L+ S+ +NQ+ K L + K
Sbjct: 181 APKAVEAGADCLIAASAIYNQEDVGGAVKLLKESAK 216
>gi|332524028|ref|ZP_08400280.1| putative ribulose-phosphate 3-epimerase [Streptococcus porcinus
str. Jelinkova 176]
gi|332315292|gb|EGJ28277.1| putative ribulose-phosphate 3-epimerase [Streptococcus porcinus
str. Jelinkova 176]
Length = 214
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 90/206 (43%), Positives = 130/206 (63%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI AD L +EI + + +H D+MDG FV NI+FG + I++++ S +F
Sbjct: 3 QILPSIFGADLLHLQKEIDFLESRNTQILHVDLMDGNFVNNIAFGPNQIKAMKEASVMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ + HI+ + D G ++I+ H ES+PH+ ++ I G+K GV INP TP +
Sbjct: 63 DVHMMLKEPEKHIDDVIDTGAEMISVHYESTPHVHSVIQKIKKAGRKAGVVINPGTPETV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L ++D+ID ILIMT+NPG GQ I +I KI+ K LIG R I +EVDGGV K
Sbjct: 123 LTYLLDDIDYILIMTINPGQPGQSFITKSIDKIKATKQLIGSRPIQIEVDGGVNKEIAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAK 211
+AGADL+VVG + F+ E SY++
Sbjct: 183 CKEAGADLIVVGGALFSDNREASYSE 208
>gi|331650114|ref|ZP_08351187.1| ribulose-phosphate 3-epimerase [Escherichia coli M605]
gi|330908423|gb|EGH36942.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli AA86]
gi|331041059|gb|EGI13216.1| ribulose-phosphate 3-epimerase [Escherichia coli M605]
Length = 231
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA ++ + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWRERKDLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|225156195|ref|ZP_03724675.1| Ribulose-phosphate 3-epimerase [Opitutaceae bacterium TAV2]
gi|224803085|gb|EEG21328.1| Ribulose-phosphate 3-epimerase [Opitutaceae bacterium TAV2]
Length = 220
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 3/210 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-SVF 65
+ PS+LA + +RL + + +H D+MDG FVPN+SFG + LR F
Sbjct: 8 LAPSLLAGNHARLADSAQIVASHAIPWLHLDIMDGHFVPNLSFGPQTVADLRPTLPGLFF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ +I A AG ++I+ H E + +LR I +G + G+ +NP TP
Sbjct: 68 DTHLMLDEPHRYIEPFAKAGANLISIHIEPAYDHAATLRRIRELGCQNGIVLNPGTPADA 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
+E + +D++L+MTV PGFGGQ +PKI Q +R + LEVDGG+
Sbjct: 128 IEPHLAHVDLVLVMTVQPGFGGQSFRRDMLPKIAQIDRWRAERGLRFRLEVDGGIDLATG 187
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
G D V G++FF ++A +
Sbjct: 188 AECAAVGTDTFVAGTAFFKAPDRAAFAATV 217
>gi|167383143|ref|XP_001736421.1| ribulose-phosphate 3-epimerase [Entamoeba dispar SAW760]
gi|165901208|gb|EDR27326.1| ribulose-phosphate 3-epimerase, putative [Entamoeba dispar SAW760]
Length = 216
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 128/215 (59%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
I PS+L+ DFS + +E + + +AGA ++H DVMDG FVPN++ GA +++ L + +
Sbjct: 4 IICPSLLSCDFSHMADEANAVLQAGADELHVDVMDGHFVPNLTLGAPIVKCLHNAIPKAF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHI---RRSLRTIHAMGKKTGVAINPET 121
DCHLMI + + +AG +ITFH E+ I + + +H+ G K GV+I P+T
Sbjct: 64 LDCHLMIENPKRWVIDYVNAGASLITFHIEAVSSIEEAKEIIDMVHSKGVKVGVSIKPKT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V ++ED+ID++D +LIMTV PGFGGQ ++ +PK+++ + + ++VDGG++ +
Sbjct: 124 QVKVIEDIIDKVDRVLIMTVEPGFGGQSFMQDMMPKVKEVREKWPSK--DIQVDGGISDK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ AGA V GS F +K L L
Sbjct: 182 TVRIAKDAGATSFVAGSYVFKEKDYSKPIHLLKTL 216
>gi|296490367|gb|DAA32480.1| ribulose-5-phosphate-3-epimerase [Bos taurus]
Length = 187
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLASLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATDNPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGV 178
Query: 179 TSRNIKSLV 187
I
Sbjct: 179 GPDTIHKCA 187
>gi|328957784|ref|YP_004375170.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. 17-4]
gi|328674108|gb|AEB30154.1| ribulose-phosphate 3-epimerase [Carnobacterium sp. 17-4]
Length = 218
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 121/211 (57%), Gaps = 1/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS++ ADF L +E++ + +AGA H D+MDG +VPN G +R + + D
Sbjct: 5 ICPSMMCADFGSLKDEVTKLDQAGADVFHIDIMDGVYVPNYGMGLQDFEFIRKATKKLVD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + ++ D G DII FHPE+ H R+L I A GKK G+AINP T + +
Sbjct: 65 VHLMVKNPADYVEKFIDMGADIIYFHPETDQHPARTLDKIRAKGKKAGIAINPGTSIETI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ D +L+MTVNPGF GQ+ ++ KI++ ++ + L VDG +++ +++L
Sbjct: 125 QELLYLADYVLVMTVNPGFAGQKYLDYVDHKIKKLSSMKNEYDFELVVDGAISNERVETL 184
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
G V+G+S K E SY + + LK
Sbjct: 185 SALGVKGFVLGTSALFGKDE-SYQEIIKSLK 214
>gi|116872124|ref|YP_848905.1| ribulose-5-phosphate 3-epimerase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741002|emb|CAK20122.1| ribulose-5-phosphate 3-epimerase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 223
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 4/219 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT + + PS++ ADFS L +EI + +AG+ H D+MDG FVP+ G + +R+
Sbjct: 1 MTKKL-LCPSMMCADFSNLQKEIEELDRAGSDIFHIDIMDGEFVPSFGMGLQDFKEIRNK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + D HLMI + +++ + AD+G DII HPE+ H R+L I GKKTGVAINP
Sbjct: 60 TQKLVDVHLMIMNPGNYVELFADSGADIIYIHPEADKHPARTLDKIRKKGKKTGVAINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T ++ +++++ +D +++MTVNPGF GQ ++ KI + L K + VDG ++
Sbjct: 120 TAISTIKELLPLVDYLMVMTVNPGFSGQTYLDYVDDKIIELVQLKKKYPFEIMVDGAISP 179
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKK 218
I L + G V+G S+ F +K YAK + LK+
Sbjct: 180 EKIAKLSKIGVRGFVLGTSALFGKK--EDYAKIIKHLKQ 216
>gi|117626373|ref|YP_859696.1| allulose-6-phosphate 3-epimerase [Escherichia coli APEC O1]
gi|218561176|ref|YP_002394089.1| allulose-6-phosphate 3-epimerase [Escherichia coli S88]
gi|218692382|ref|YP_002400594.1| allulose-6-phosphate 3-epimerase [Escherichia coli ED1a]
gi|306815781|ref|ZP_07449930.1| allulose-6-phosphate 3-epimerase [Escherichia coli NC101]
gi|331660675|ref|ZP_08361607.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
gi|115515497|gb|ABJ03572.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli APEC O1]
gi|218367945|emb|CAR05743.1| allulose-6-phosphate 3-epimerase [Escherichia coli S88]
gi|218429946|emb|CAR10924.2| allulose-6-phosphate 3-epimerase [Escherichia coli ED1a]
gi|222035814|emb|CAP78559.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli LF82]
gi|281181176|dbj|BAI57506.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli SE15]
gi|294493516|gb|ADE92272.1| ribulose-phosphate 3-epimerase [Escherichia coli IHE3034]
gi|305851443|gb|EFM51898.1| allulose-6-phosphate 3-epimerase [Escherichia coli NC101]
gi|307556256|gb|ADN49031.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli ABU 83972]
gi|307629157|gb|ADN73461.1| allulose-6-phosphate 3-epimerase [Escherichia coli UM146]
gi|312948680|gb|ADR29507.1| allulose-6-phosphate 3-epimerase [Escherichia coli O83:H1 str. NRG
857C]
gi|320193464|gb|EFW68101.1| allulose-6-phosphate 3-epimerase [Escherichia coli WV_060327]
gi|323954428|gb|EGB50212.1| ribulose-phosphate 3-epimerase [Escherichia coli H263]
gi|331051717|gb|EGI23756.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
Length = 231
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|325568579|ref|ZP_08144872.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
gi|325157617|gb|EGC69773.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
Length = 215
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 131/214 (61%), Gaps = 4/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSI AD L ++I + + + +H D+MDG FV NI+FG + I ++ S VF
Sbjct: 3 KILPSIFGADIMHLQDDIHFLEEEKTEILHVDLMDGNFVSNIAFGPNQIAEMKKNSKMVF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ HI+ + G ++I+ H ES+PHI L+ I G+K GV INP TP AI
Sbjct: 63 DVHMMVQHPKDHIDDVIATGAEMISVHYESTPHIHSILQKIRKAGRKAGVVINPGTPEAI 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE ++D+ID ILIMT+NPG GQ I ++ KIRQ K LIG R I +EVDGGV K
Sbjct: 123 LEYLLDDIDYILIMTINPGQPGQTFIRKSLEKIRQTKELIGDRKIQIEVDGGVNKEIAKE 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA+L+VVG + F+ + Y L+++
Sbjct: 183 CAEAGAELIVVGGALFSGDKKAQY----QALREA 212
>gi|26250902|ref|NP_756942.1| allulose-6-phosphate 3-epimerase [Escherichia coli CFT073]
gi|91213634|ref|YP_543620.1| allulose-6-phosphate 3-epimerase [Escherichia coli UTI89]
gi|237703673|ref|ZP_04534154.1| allulose-6-phosphate 3-epimerase [Escherichia sp. 3_2_53FAA]
gi|26111334|gb|AAN83516.1|AE016771_27 D-allulose-6-phosphate 3-epimerase [Escherichia coli CFT073]
gi|91075208|gb|ABE10089.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli UTI89]
gi|226901585|gb|EEH87844.1| allulose-6-phosphate 3-epimerase [Escherichia sp. 3_2_53FAA]
Length = 233
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 75/214 (35%), Positives = 115/214 (53%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 2 NMKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASK 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETP
Sbjct: 61 PLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
V ++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 121 VEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQ 180
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 181 ATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 214
>gi|331681021|ref|ZP_08381658.1| ribulose-phosphate 3-epimerase [Escherichia coli H299]
gi|331081242|gb|EGI52403.1| ribulose-phosphate 3-epimerase [Escherichia coli H299]
Length = 231
Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DNHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|91070298|gb|ABE11216.1| ribulose-phosphate 3-epimerase [uncultured Prochlorococcus marinus
clone HF10-88D1]
Length = 252
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 133/230 (57%), Gaps = 14/230 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 13 NRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYC 72
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
D F+ LM+S + ++ + A ++ H E++ H+ R L I +G
Sbjct: 73 DVPFETQLMVSQYNCETMLESYVKATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSP 132
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--S 171
VA+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + + ++++
Sbjct: 133 SVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREIRNFVIEKNLNVD 192
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+EVDGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 193 IEVDGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|227500116|ref|ZP_03930187.1| ribulose-phosphate 3-epimerase [Anaerococcus tetradius ATCC 35098]
gi|227217831|gb|EEI83128.1| ribulose-phosphate 3-epimerase [Anaerococcus tetradius ATCC 35098]
Length = 221
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 74/210 (35%), Positives = 126/210 (60%), Gaps = 2/210 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+ DFS+L E++ G K IH DVMDG FVPNISF +I+ +R +D
Sbjct: 2 VELAPSILSCDFSKLQEDLDATKDTGLKMIHIDVMDGLFVPNISFAFKIIKDIRDKNDYF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I+ +AGCD +T H E+S +++ I A G + G+++ P+T
Sbjct: 62 FDTHLMIVDPIRYIDRFVEAGCDRLTIHYEASDSPLEAIKKIKACGIEAGISLKPKTACE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ ++ +D +L+M+V PGFGGQ +E ++ K++ + I + + +E+DGG+ + N
Sbjct: 122 KILPLLAYVDAVLVMSVEPGFGGQSFMEESLDKVKFLRKYIDENKLSCKIEIDGGIKTEN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
++ ++ AG D +V GS F ++ ++
Sbjct: 182 VRRVIAAGCDEIVSGSDIFAKEDIRGQIEK 211
>gi|254526080|ref|ZP_05138132.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9202]
gi|221537504|gb|EEE39957.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9202]
Length = 252
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 134/230 (58%), Gaps = 14/230 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 13 NRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMITACRKYC 72
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ F+ LM+S + ++ + +A ++ H E++ H+ R L I +G
Sbjct: 73 NVPFETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSP 132
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--S 171
VA+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + I ++++
Sbjct: 133 SVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREIRNFIIEKNLNVD 192
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+EVDGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 193 IEVDGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|154249667|ref|YP_001410492.1| ribulose-phosphate 3-epimerase [Fervidobacterium nodosum Rt17-B1]
gi|154153603|gb|ABS60835.1| Ribulose-phosphate 3-epimerase [Fervidobacterium nodosum Rt17-B1]
Length = 212
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 82/201 (40%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SILAAD SRL EE+ + K +IH DVMDG FVPN++FG +I +LR+++D
Sbjct: 3 IISASILAADLSRLKEELERV-KPFIDEIHLDVMDGHFVPNLTFGYPMIETLRTFTDLPI 61
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+++ D HI + + G +T H E+ H+ RS+ I ++G + VAINP T +
Sbjct: 62 DAHLMVTNPDDHIKLFIEKGATRVTIHQETCYHLHRSVELIKSLGAEAFVAINPATSIYT 121
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNI 183
LE+++ D IL+MTVNPGF GQ+ I + + KI++ + +R++ + VDGGV + N
Sbjct: 122 LEEILSYADGILVMTVNPGFSGQKFIPTMMEKIKRLNEIRKERNLSFKIAVDGGVGNSNA 181
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ L+ G ++LV+G F
Sbjct: 182 QDLINIGVNILVMGYGVFRND 202
>gi|16131911|ref|NP_418509.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|89110807|ref|AP_004587.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. W3110]
gi|170021915|ref|YP_001726869.1| allulose-6-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|170083539|ref|YP_001732859.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|218702751|ref|YP_002410380.1| allulose-6-phosphate 3-epimerase [Escherichia coli IAI39]
gi|238903195|ref|YP_002928991.1| allulose-6-phosphate 3-epimerase [Escherichia coli BW2952]
gi|253775285|ref|YP_003038116.1| allulose-6-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254037096|ref|ZP_04871173.1| D-allulose-6-phosphate 3-epimerase [Escherichia sp. 1_1_43]
gi|254164020|ref|YP_003047128.1| allulose-6-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|256024961|ref|ZP_05438826.1| allulose-6-phosphate 3-epimerase [Escherichia sp. 4_1_40B]
gi|297519446|ref|ZP_06937832.1| allulose-6-phosphate 3-epimerase [Escherichia coli OP50]
gi|301019251|ref|ZP_07183445.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|307140778|ref|ZP_07500134.1| allulose-6-phosphate 3-epimerase [Escherichia coli H736]
gi|331644833|ref|ZP_08345950.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli H736]
gi|418563|sp|P32719|ALSE_ECOLI RecName: Full=D-allulose-6-phosphate 3-epimerase
gi|197305058|pdb|3CT7|A Chain A, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305059|pdb|3CT7|B Chain B, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305060|pdb|3CT7|C Chain C, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305061|pdb|3CT7|D Chain D, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305062|pdb|3CT7|E Chain E, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|197305063|pdb|3CT7|F Chain F, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K-12
gi|224036306|pdb|3CTL|A Chain A, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036307|pdb|3CTL|B Chain B, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036308|pdb|3CTL|C Chain C, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036309|pdb|3CTL|D Chain D, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036310|pdb|3CTL|E Chain E, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|224036311|pdb|3CTL|F Chain F, Crystal Structure Of D-Allulose 6-Phosphate 3-Epimerase
From Escherichia Coli K12 Complexed With D-Glucitol 6-
Phosphate And Magnesium
gi|396420|gb|AAC43179.1| ORF_f231 [Escherichia coli str. K-12 substr. MG1655]
gi|1790523|gb|AAC77046.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. MG1655]
gi|85676838|dbj|BAE78088.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K12 substr.
W3110]
gi|169756843|gb|ACA79542.1| Ribulose-phosphate 3-epimerase [Escherichia coli ATCC 8739]
gi|169891374|gb|ACB05081.1| allulose-6-phosphate 3-epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|218372737|emb|CAR20614.1| allulose-6-phosphate 3-epimerase [Escherichia coli IAI39]
gi|226840202|gb|EEH72204.1| D-allulose-6-phosphate 3-epimerase [Escherichia sp. 1_1_43]
gi|238859965|gb|ACR61963.1| allulose-6-phosphate 3-epimerase [Escherichia coli BW2952]
gi|242379612|emb|CAQ34434.1| allulose-6-phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|253326329|gb|ACT30931.1| Ribulose-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975921|gb|ACT41592.1| allulose-6-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|253980077|gb|ACT45747.1| allulose-6-phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|260451084|gb|ACX41506.1| Ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|299882300|gb|EFI90511.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|309704554|emb|CBJ03903.1| allulose-6-phosphate 3-epimerase [Escherichia coli ETEC H10407]
gi|315138641|dbj|BAJ45800.1| allulose-6-phosphate 3-epimerase [Escherichia coli DH1]
gi|323380526|gb|ADX52794.1| Ribulose-phosphate 3-epimerase [Escherichia coli KO11]
gi|331035808|gb|EGI08046.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli H736]
gi|332346093|gb|AEE59427.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 231
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|227890272|ref|ZP_04008077.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii ATCC 33200]
gi|227849086|gb|EEJ59172.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii ATCC 33200]
Length = 216
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 120/213 (56%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL AD L +I ++G + H D+MDG FVPN+S+G ++++ +
Sbjct: 1 MIAPSILNADNMHLSRDIKAAIESGIDRFHIDIMDGHFVPNLSYGPELVKDFKRSFPLTD 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + +++ + + +AGCD++ FH E++ + ++ + + G+AINP TPV
Sbjct: 61 AEIHLMSNDLETTLPLFVEAGCDLLEFHYEATDNPEYWIKYLKDHNVRCGMAINPSTPVQ 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ + E+D +L+MTV PGFGGQ+ E ++ ++ + K +I ++S +EVDGG+ +
Sbjct: 121 KLQPFLKELDQVLLMTVKPGFGGQKFEEQSVERLVELKNMIEAENLSVPIEVDGGIEPKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA + V GS F +L
Sbjct: 181 VKLTRDAGATIFVAGSYIFKNGSIEDQVMKLKK 213
>gi|157413195|ref|YP_001484061.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9215]
gi|157387770|gb|ABV50475.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9215]
Length = 252
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 134/230 (58%), Gaps = 14/230 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 13 NRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMITACRKYC 72
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ F+ LM+S + ++ + +A ++ H E++ H+ R L I +G
Sbjct: 73 NVPFETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSP 132
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--S 171
VA+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + I ++++
Sbjct: 133 SVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLKKIREIRNFIIEKNLNVD 192
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+EVDGG+ + I AGA+ + GS F + + +DL+K A
Sbjct: 193 IEVDGGIKANWTISQCADAGANCFIAGSGMFAYP---TLKEGCDDLRKVA 239
>gi|283787065|ref|YP_003366930.1| D-allulose-6-phosphate 3-epimerase [Citrobacter rodentium ICC168]
gi|282950519|emb|CBG90184.1| D-allulose-6-phosphate 3-epimerase [Citrobacter rodentium ICC168]
Length = 231
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASIP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I+ +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYISQLAQAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + KI + K + +EVDG
Sbjct: 120 ETMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKIAELKRWREREGWQYEIEVDGSCNQL 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN +I A +
Sbjct: 180 TYQQLMAAGADVFIVGTSGLFNHAADIDKAWNI 212
>gi|291532019|emb|CBK97604.1| ribulose-phosphate 3-epimerase [Eubacterium siraeum 70/3]
Length = 215
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I S+LA+D + + +EI A + +H DVMDG FV NI++G +V+ ++R S+ F
Sbjct: 4 IISASMLASDLTNIEKEIRRTENAQIEWLHIDVMDGVFVDNITYGNNVVAAMRKVSNIYF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ + I + A AG +++T H ES +L+ I G G+AI P T
Sbjct: 64 DTHLMVTDPTNLIPLFALAGSNMLTIHLESKGDTTANLKYIKKSGMNAGLAIKPATDWKE 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSRN 182
+ + DM+L+MTV PG+GGQ I K+ + + ++VDGG+ +
Sbjct: 124 VIPYLPLCDMVLVMTVEPGYGGQGFIPQCADKVAMLRKYCNENGFDKMNIQVDGGINTAT 183
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++ AGA++LV G+ F K + A +
Sbjct: 184 AATVKDAGANVLVAGTYLFRAKDMKAAADAIR 215
>gi|323950348|gb|EGB46229.1| ribulose-phosphate 3-epimerase [Escherichia coli H252]
Length = 231
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A G D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARVGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|298346828|ref|YP_003719515.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii ATCC 43063]
gi|304389467|ref|ZP_07371430.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315655373|ref|ZP_07908273.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii ATCC 51333]
gi|315656713|ref|ZP_07909600.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298236889|gb|ADI68021.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii ATCC 43063]
gi|304327277|gb|EFL94512.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315490313|gb|EFU79938.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii ATCC 51333]
gi|315492668|gb|EFU82272.1| ribulose-phosphate 3-epimerase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 220
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 120/215 (55%), Gaps = 5/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S++I PS+L D + + +I A +H D+MD FVPN+++G ++ + +
Sbjct: 2 SLKIYPSVLNCDQMHFAKALQDIKS--ADGVHLDIMDNHFVPNLTWGLPTATAVLNSTRL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI + D A AGC I+ FH E+S R+ +H++G K G+A+NP TP
Sbjct: 60 PVDAHLMIENPDRWSLEYAKAGCAIVCFHLEASRAPIRTADVLHSLGAKVGIALNPATPA 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSR 181
+ ++D++ D + +M+V PGFGGQ+ I +PKIRQ +A + + +EVDGG+
Sbjct: 120 SAIKDILGRFDQVTVMSVEPGFGGQKFIPEVLPKIRQLRAYAEDARLPLDIEVDGGINDD 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++QAGA+++V GS F + L +
Sbjct: 180 TLPLVLQAGANVVVAGSYVFK-RNPEQAIATLRTI 213
>gi|307264808|ref|ZP_07546370.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306920066|gb|EFN50278.1| ribulose-phosphate 3-epimerase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 183
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 78/179 (43%), Positives = 114/179 (63%), Gaps = 2/179 (1%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
MDG FVPNI+ G V++SLR + FD HLMI + D +I A++G DIIT H E+ H
Sbjct: 1 MDGHFVPNITIGPVVVKSLRKFFSLPFDVHLMIENPDLYIEEFANSGADIITVHQEACIH 60
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
+ R+++ I GKK GV++NP T + L+ ++ ++DM+LIMTVNPGFGGQ+ I+S + KI
Sbjct: 61 LHRTIQKIKGYGKKAGVSLNPATSLETLKYILQDVDMVLIMTVNPGFGGQKFIDSMLKKI 120
Query: 159 RQAKALIG--KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ L K +EVDGG+ N+K +V+AGAD++V GS+ F+ K +
Sbjct: 121 EELNKLRETLKLDFKIEVDGGINIHNVKEVVRAGADIIVAGSAIFDSSNPAQTIKEFRE 179
>gi|169335083|ref|ZP_02862276.1| hypothetical protein ANASTE_01490 [Anaerofustis stercorihominis DSM
17244]
gi|169257821|gb|EDS71787.1| hypothetical protein ANASTE_01490 [Anaerofustis stercorihominis DSM
17244]
Length = 224
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ SI+ + + G E+ + KAGA IHFD+MDG +V NI+ G ++ ++ +
Sbjct: 4 LKVSASIMCGNPMKFGWELDKLEKAGADLIHFDMMDGHYVENIAMGIYMLEQMKKRTSIP 63
Query: 65 FDCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
FD HL + + HI IA D I HPES+ HI R LR I MG K GVAINP T
Sbjct: 64 FDVHLAMFHPEKHIEKIASILDENDCIHVHPESTVHIHRVLRDIKRMGVKAGVAINPATN 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTS 180
LE +ID+IDM+L MTV+PGF GQ+ I+ T+ KI + + R+ + + VDG + +
Sbjct: 124 EDCLEYLIDDIDMVLAMTVSPGFAGQKFIKQTLGKIENIRKMADDRNPDLMIAVDGNINA 183
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I V+AGAD+LV G+S + + Y + + +K S
Sbjct: 184 ETIPGCVKAGADVLVAGTSSIFKGDDADYKELIQKMKDS 222
>gi|295095448|emb|CBK84538.1| D-allulose 6-phosphate 3-epimerase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 231
Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats.
Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFIDQH-ADYFHIDIMDGHFVPNLTLSPFFVGQVKKLATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I+ +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYISQLAQAGADFITLHPETINGQAFRLIEEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + KI + KA + + +E+DG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLEKIAELKAWREREGLSYEIEIDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
K L+ AGAD+ +VG S FN I A +L
Sbjct: 180 TYKKLMAAGADVFIVGTSGLFNHAENIGDAWQL 212
>gi|170679730|ref|YP_001746479.1| allulose-6-phosphate 3-epimerase [Escherichia coli SMS-3-5]
gi|170517448|gb|ACB15626.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli SMS-3-5]
Length = 231
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|296120916|ref|YP_003628694.1| ribulose-phosphate 3-epimerase [Planctomyces limnophilus DSM 3776]
gi|296013256|gb|ADG66495.1| ribulose-phosphate 3-epimerase [Planctomyces limnophilus DSM 3776]
Length = 234
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 131/215 (60%), Gaps = 1/215 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+L DF+ L E+S + +A A +H+DVMDG FVPN+S+GA +I S+R + FD
Sbjct: 19 IAPSMLKVDFADLATEVSRLEEAHAHLLHWDVMDGNFVPNLSYGAMLIASVRKRTSLFFD 78
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI+ + +++ AGCD IT H E++P L+ I A G G+AINP TP++ L
Sbjct: 79 AHLMIAHPEKYVDEYLAAGCDAITVHIEAAPEPAEILQRIRAGGAHAGLAINPHTPLSHL 138
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E +D+ D++L+M+V PGFGGQ+ + + K+R ++ + + L +DGG+ + I +
Sbjct: 139 EPWLDQCDLVLVMSVQPGFGGQKFMPEVLDKVRALRSRLA-PHVRLSIDGGIGTTTIAAA 197
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
AGA L V GS+ F+ ++L L S+L
Sbjct: 198 SAAGARLFVAGSAIFDVSDYAIAMRQLEQLASSSL 232
>gi|67478059|ref|XP_654455.1| ribulose-phosphate 3-epimerase [Entamoeba histolytica HM-1:IMSS]
gi|56471502|gb|EAL49066.1| ribulose-phosphate 3-epimerase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 216
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 127/215 (59%), Gaps = 6/215 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
I PS+L+ DFS + +E + + +AGA ++H DVMDG FVPN++ GA +++ L + +
Sbjct: 4 IICPSLLSCDFSHMADEANAVLQAGADELHVDVMDGHFVPNLTLGAPIVKCLHNAIPKAF 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR---RSLRTIHAMGKKTGVAINPET 121
DCHLMI + + +AG ++TFH E+ I + +H+ G K G++I P+T
Sbjct: 64 LDCHLMIENPKRWVMDYVNAGASLVTFHIEAVSSIDEAKEIIDMVHSKGVKVGISIKPKT 123
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V ++ED+ID++D +LIMTV PGFGGQ ++ +PK+++ + + ++VDGG++ +
Sbjct: 124 QVKVIEDIIDKVDRVLIMTVEPGFGGQSFMQDMMPKVKEVREKWPLK--DIQVDGGISDK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ AGA V GS F +K L L
Sbjct: 182 TVRIAKDAGATSFVAGSYVFKEKDYSKPIHLLKTL 216
>gi|191168775|ref|ZP_03030552.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli B7A]
gi|193063106|ref|ZP_03044198.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli E22]
gi|194426732|ref|ZP_03059285.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli B171]
gi|260846880|ref|YP_003224658.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli O103:H2 str.
12009]
gi|190901202|gb|EDV60974.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli B7A]
gi|192931365|gb|EDV83967.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli E22]
gi|194415068|gb|EDX31337.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli B171]
gi|257762027|dbj|BAI33524.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli O103:H2 str.
12009]
Length = 231
Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRCHDMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|25028273|ref|NP_738327.1| ribulose-phosphate 3-epimerase [Corynebacterium efficiens YS-314]
gi|259507331|ref|ZP_05750231.1| ribulose-phosphate 3-epimerase [Corynebacterium efficiens YS-314]
gi|23493557|dbj|BAC18527.1| putative ribulose-phosphate 3-epimerase [Corynebacterium efficiens
YS-314]
gi|259165042|gb|EEW49596.1| ribulose-phosphate 3-epimerase [Corynebacterium efficiens YS-314]
Length = 221
Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 73/224 (32%), Positives = 115/224 (51%), Gaps = 18/224 (8%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSILAAD++RLGEEI+ + A IH D+MDG FVPN+SFG DV R++ +D
Sbjct: 5 RKPIIAPSILAADYARLGEEIAAVPD--ADWIHVDIMDGHFVPNLSFGYDVTRAVHRVTD 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + + ++ DAG + FH E++ + I + G + G ++ P TP
Sbjct: 63 KPLDVHLMIENPEKWVDHYIDAGAACVIFHVEATDKHVELAQHIRSKGVRAGFSLRPGTP 122
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---------SLE 173
+ D ++ D +++M+V PGFGGQ + + K+R + +I +R +
Sbjct: 123 IEDYLDDLEHFDEVIVMSVEPGFGGQSFMPDQLDKVRTLRRVIDERGLDIIIEIDGGI-- 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ I+ +AG D V GS+ F + + L L
Sbjct: 181 -----SATTIEQAAEAGVDAYVAGSAVFGADEPNAAVQELRALA 219
>gi|209921574|ref|YP_002295658.1| allulose-6-phosphate 3-epimerase [Escherichia coli SE11]
gi|209914833|dbj|BAG79907.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli SE11]
Length = 231
Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|304394970|ref|ZP_07376854.1| Ribulose-phosphate 3-epimerase [Pantoea sp. aB]
gi|304357223|gb|EFM21586.1| Ribulose-phosphate 3-epimerase [Pantoea sp. aB]
Length = 214
Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 134/216 (62%), Gaps = 4/216 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI A+ RL +EI + + + +H D+MDG +V NI+FG + I +++ S F
Sbjct: 3 QILPSIFGANILRLQDEIRFLEEENTEILHVDLMDGTYVSNIAFGPNQITAMKKASRMKF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M++ + HI+ + G ++I+ H ES+PH+ L+ I G+K GV INP TP +
Sbjct: 63 DVHMMLADPEKHIDAVIGTGAEMISVHYESTPHVHYILQKIRKAGRKAGVVINPGTPEGV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L ++D+ID ILIMT+NPG GQ IE ++ KI + +I +R+I +EVDGG+
Sbjct: 123 LSYLLDDIDYILIMTINPGQPGQTFIEKSLEKISNTRKMIAQRNIQIEVDGGINLTLASK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGADL+VVG + FN+ SY +LK + L
Sbjct: 183 VKEAGADLIVVGGALFNEDPASSY----RELKTAML 214
>gi|42519407|ref|NP_965337.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii NCC 533]
gi|41583695|gb|AAS09303.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii NCC 533]
Length = 216
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 71/213 (33%), Positives = 120/213 (56%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL AD L +I ++G + H D+MDG FVPN+S+G ++++ +
Sbjct: 1 MIAPSILNADNMHLSRDIKAAIESGIDRFHIDIMDGHFVPNLSYGPELVKDFKRSFPLTD 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + +++ + + +AGCD++ FH E++ + L+ + + G+AINP TPV
Sbjct: 61 AEIHLMSNDLETTLPLFVEAGCDLLEFHYEATDNPEYWLKYLKDHNVRCGMAINPSTPVQ 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ + E+D +L+MTV PGFGGQ+ E ++ ++ + K +I ++S +EVDGG+ +
Sbjct: 121 KLQPFLKELDQVLLMTVKPGFGGQKFEEESVERLVELKNMIEAENLSVPIEVDGGIEPKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA + V GS F +L
Sbjct: 181 LKLTRDAGATIFVAGSYIFKNGSIEDQVMKLKK 213
>gi|168334498|ref|ZP_02692664.1| allulose-6-phosphate 3-epimerase [Epulopiscium sp. 'N.t. morphotype
B']
Length = 221
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 116/214 (54%), Gaps = 1/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I S++ AD L I + K + H D+MDG FVPN+S D + +++ +
Sbjct: 1 MKISASLMCADLLNLEASIRQLEKTDIEMYHIDIMDGHFVPNLSLNFDTLAAIQKIATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+++ +I+ +A D I FH E+ + R L I A+G K G+A+NP+T
Sbjct: 61 LDVHLMVTNPQDYISKLAALNVDYIVFHLETCNNPIRLLNEIRALGIKGGIALNPKTDPL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L+ ++D +D+I+IMTV PGF GQ+ I S + KI K + R I +EVDG +T N +
Sbjct: 121 ALQYLLDYVDLIVIMTVEPGFAGQKFIPSQLSKISAIKNMCQNRDILIEVDGNITLENAR 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ GAD+ V+G+S + Y +
Sbjct: 181 NCYNLGADIGVLGTSVLFKAD-ADYIAATTKFRN 213
>gi|16802777|ref|NP_464262.1| hypothetical protein lmo0735 [Listeria monocytogenes EGD-e]
gi|47095300|ref|ZP_00232911.1| Ribulose-phosphate 3 epimerase family superfamily [Listeria
monocytogenes str. 1/2a F6854]
gi|224499605|ref|ZP_03667954.1| hypothetical protein LmonF1_07874 [Listeria monocytogenes Finland
1988]
gi|224501960|ref|ZP_03670267.1| hypothetical protein LmonFR_05507 [Listeria monocytogenes FSL
R2-561]
gi|254828819|ref|ZP_05233506.1| ribulose-phosphate epimerase [Listeria monocytogenes FSL N3-165]
gi|254830275|ref|ZP_05234930.1| hypothetical protein Lmon1_02902 [Listeria monocytogenes 10403S]
gi|254900029|ref|ZP_05259953.1| hypothetical protein LmonJ_09450 [Listeria monocytogenes J0161]
gi|254911418|ref|ZP_05261430.1| ribulose-phosphate 3 epimerase family superfamily protein [Listeria
monocytogenes J2818]
gi|254935745|ref|ZP_05267442.1| ribulose-phosphate epimerase [Listeria monocytogenes F6900]
gi|284801066|ref|YP_003412931.1| hypothetical protein LM5578_0815 [Listeria monocytogenes 08-5578]
gi|284994208|ref|YP_003415976.1| hypothetical protein LM5923_0770 [Listeria monocytogenes 08-5923]
gi|16410124|emb|CAC98813.1| lmo0735 [Listeria monocytogenes EGD-e]
gi|47016371|gb|EAL07293.1| Ribulose-phosphate 3 epimerase family superfamily [Listeria
monocytogenes str. 1/2a F6854]
gi|258601231|gb|EEW14556.1| ribulose-phosphate epimerase [Listeria monocytogenes FSL N3-165]
gi|258608329|gb|EEW20937.1| ribulose-phosphate epimerase [Listeria monocytogenes F6900]
gi|284056628|gb|ADB67569.1| hypothetical protein LM5578_0815 [Listeria monocytogenes 08-5578]
gi|284059675|gb|ADB70614.1| hypothetical protein LM5923_0770 [Listeria monocytogenes 08-5923]
gi|293589360|gb|EFF97694.1| ribulose-phosphate 3 epimerase family superfamily protein [Listeria
monocytogenes J2818]
Length = 223
Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 125/222 (56%), Gaps = 4/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PS++ ADFS L E+ + KAG+ H D+MDG FVP+ G +R
Sbjct: 1 MSKKL-ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + D HLMI + ++ + AD G DII HPE+ H R+L I GKK G+AINP
Sbjct: 60 TQKLVDVHLMIMNPGDYVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +A +++++ +D +++MTVNPGF GQ+ ++ KI + L + + VDG ++
Sbjct: 120 TAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELKKDYTFEIMVDGAISP 179
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSAL 221
I L Q G V+G S+ F +K SYA+ + LK+ +
Sbjct: 180 EKISKLSQLGVKGFVLGTSALFGKK--ESYAEIIKKLKQEKM 219
>gi|297180743|gb|ADI16951.1| pentose-5-phosphate-3-epimerase [uncultured SAR406 cluster
bacterium HF0010_18O13]
Length = 227
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 128/221 (57%), Gaps = 9/221 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PS+L ADFS L +E+ + A+ +H D+MD FVPN+SFG +++SLR +S
Sbjct: 4 AKNPIIAPSVLGADFSNLQKEVKFCNDSKAEWLHLDIMDQQFVPNLSFGPGLVKSLRPHS 63
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-----IRRSLRTIHAMGKKTGVA 116
+ FD HLM+S+ ++ DAG D I+FH E++ + + I K G+A
Sbjct: 64 ELFFDVHLMVSNPFDMLSPFIDAGADGISFHIEATESRFTFPPKILINMIKKNDLKCGIA 123
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA----LIGKRSISL 172
I P+TP +IL+ I+ ID I++M+V+PGFGGQ I STI KI + + + I +
Sbjct: 124 IKPKTPFSILKKYIEFIDYIVVMSVDPGFGGQSFIPSTIQKISEINEYLIDMKIRDKIMI 183
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+VDGG+ N K +++AG D+LV GS F + I +
Sbjct: 184 QVDGGIKLENYKDVIEAGGDILVAGSQVFKSENPIETINTM 224
>gi|254995380|ref|ZP_05277570.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Mississippi]
gi|255003567|ref|ZP_05278531.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Puerto Rico]
gi|255004693|ref|ZP_05279494.1| ribulose-phosphate 3-epimerase (rpe) [Anaplasma marginale str.
Virginia]
Length = 238
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 134/217 (61%), Gaps = 2/217 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + SIL+ADF+ L ++ + AG +H DVMDGCFVPN++ G VI ++ +
Sbjct: 22 AKGVVVSASILSADFANLSASVAAVEAAGVDWLHVDVMDGCFVPNLTVGPVVIAGIKKCT 81
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
V D HLM+ + H+ + DAG DIIT H ES H+ R +R + + GKK GV++ P+T
Sbjct: 82 RLVLDVHLMVQTPALHLRSVIDAGADIITVHAESDVHLYRFVREVKSHGKKVGVSLVPKT 141
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVT 179
+ LE VI E+D++L+M+V+PGF GQ+ + S + KI + + ++ K S+ + VDGGVT
Sbjct: 142 HHSALEYVIHELDLVLVMSVDPGFAGQEFLTSQLRKIEKIRTMVEKYSLPTKISVDGGVT 201
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ N+ S+V AGAD++VVG+S F + L
Sbjct: 202 TENVGSIVNAGADVVVVGTSLFKSANMYKVVQALKSF 238
>gi|154508792|ref|ZP_02044434.1| hypothetical protein ACTODO_01301 [Actinomyces odontolyticus ATCC
17982]
gi|153798426|gb|EDN80846.1| hypothetical protein ACTODO_01301 [Actinomyces odontolyticus ATCC
17982]
Length = 220
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E++ I AGA H DVMD FVPN+S+G V ++ D
Sbjct: 5 ISPSILNCDIANLRGELTKI--AGADIAHVDVMDNHFVPNLSWGLPVAEAVVKSGILPVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+ GC+ +TFH E++ R R +H +G + G+A+ P T +A
Sbjct: 63 AHLMIEDPDRWAPQYAEVGCESVTFHAEAAAAPLRLARELHRIGARAGLALKPATDIAPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
D+++E DMILIMTV PGFGGQ IE IPKI + + I + S++VDGG++ I+
Sbjct: 123 VDILNEFDMILIMTVEPGFGGQSFIEQMIPKIERTRTAINAAGLQVSIQVDGGISRATIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGAD V GS+ F + L +L +
Sbjct: 183 RAAEAGADNFVAGSAVFRADDAHREVEALRELANA 217
>gi|329667068|gb|AEB93016.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii DPC 6026]
Length = 216
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 120/213 (56%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL AD L +I ++G + H D+MDG FVPN+S+G ++++ +
Sbjct: 1 MIAPSILNADNMHLSRDIKAAIESGIDRFHIDIMDGHFVPNLSYGPELVKDFKRSFPLTD 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + +++ + + +AGCD++ FH E++ + ++ + + G+AINP TPV
Sbjct: 61 AEIHLMSNDLETTLPLFVEAGCDLLEFHYEATDNPEYWIKYLKDHNVRCGMAINPSTPVQ 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ + E+D +L+MTV PGFGGQ+ E ++ ++ + K +I ++S +EVDGG+ +
Sbjct: 121 KLQPFLKELDQVLLMTVKPGFGGQKFEEESVERLVELKNMIEAENLSVPIEVDGGIEPKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA + V GS F +L
Sbjct: 181 LKLTRDAGATIFVAGSYIFKNGSIEDQVMKLKK 213
>gi|323342151|ref|ZP_08082384.1| ribulose-phosphate 3-epimerase [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322464576|gb|EFY09769.1| ribulose-phosphate 3-epimerase [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 216
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 7/213 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + PS+L+ DF + ++ + AGA +H+DVMDG FV NISFG +++ +
Sbjct: 1 MSK--IVSPSLLSLDFKDMKTQLKRVEVAGATWLHYDVMDGVFVDNISFGPSIMKQIGQV 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI---RRSLRTIHAMGKKTGVAI 117
SD + D HLMI + + + ++ + G D ITFH E +++ + G K G+ +
Sbjct: 59 SDLLMDVHLMIVNPEKYFDMFIENGADAITFHTECYGDPTQGIEAVKQLKKKGIKAGITL 118
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P T + + + +D++L+M+V PGFGGQ + + +I+Q + + + VD
Sbjct: 119 RPGTDLDKIVPYLKHVDLVLVMSVEPGFGGQAFMPEMLERIKQLDEMRKLNNYEYLISVD 178
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
GG+ AGAD+LV GS F E +
Sbjct: 179 GGINGETGPRARLAGADILVAGSYVFGDDIEKA 211
>gi|33240289|ref|NP_875231.1| Pentose-5-phosphate-3-epimerase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237816|gb|AAP99883.1| Pentose-5-phosphate-3-epimerase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 247
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 80/230 (34%), Positives = 130/230 (56%), Gaps = 11/230 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G+ + ++ +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 9 NRPIQIIPSVLPADWANMGQCVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYC 68
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ F+ LM+S + ++ + +A ++ H E++ H+ R L I +G
Sbjct: 69 NVPFETQLMVSQYNCETMLEAYVEASKGPNGEPGVVIAHVEANVHLHRILGKIRQLGGSP 128
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSIS 171
VA+NP TP+ +++DV+D +D +L+MTVNPGFGGQ I + + KI+ + +I I
Sbjct: 129 SVALNPHTPMEMVKDVLDMVDHVLVMTVNPGFGGQAYIPTMLNKIKSLREVIVENNYDID 188
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+EVDGG+ + I AGA+ + GS F L + K A
Sbjct: 189 IEVDGGIKADWTISQCCAAGANCFIAGSGMFAYPSLKEGCDALRSVAKDA 238
>gi|238854789|ref|ZP_04645119.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 269-3]
gi|260664020|ref|ZP_05864873.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii SJ-7A-US]
gi|282933867|ref|ZP_06339215.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 208-1]
gi|313472301|ref|ZP_07812793.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 1153]
gi|238832579|gb|EEQ24886.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 269-3]
gi|239529851|gb|EEQ68852.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 1153]
gi|260561906|gb|EEX27875.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii SJ-7A-US]
gi|281301956|gb|EFA94210.1| ribulose-phosphate 3-epimerase [Lactobacillus jensenii 208-1]
Length = 220
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 124/215 (57%), Gaps = 3/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD LG +I T+AG + H D+MDG FVPN+S+G +++ + V
Sbjct: 1 MIIAPSILNADNLNLGRDIKKATQAGITRFHIDIMDGHFVPNLSYGPQLVQDFKREFPLV 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ HLM ++++ I AG D++ FH E+S + L + + G KTG+ +NPET V
Sbjct: 61 EAEIHLMSDNLETMIPAFTQAGADLLEFHFEASKKVEYWLDYLASNGVKTGLVLNPETDV 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+L+ + E+ +L+M+V+PGFGGQ+ I T KI Q K L+ +++ +EVDGG+ +
Sbjct: 121 NVLKPYLKELKQVLLMSVHPGFGGQKYIPETADKIAQLKQLMKDANVNIPIEVDGGINDK 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+AGA++LV GS F ++L +
Sbjct: 181 TAPLAEKAGANVLVCGSYIFKNGDIAGQIRKLEGI 215
>gi|134045513|ref|YP_001096999.1| ribulose-5-phosphate 3-epimerase [Methanococcus maripaludis C5]
gi|132663138|gb|ABO34784.1| ribulose-5-phosphate 3-epimerase [Methanococcus maripaludis C5]
Length = 219
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + +E+ + H D+MDG FVPN+S G V L+S +D
Sbjct: 2 VMIGASILSADYGHMEQEVKKAEEGNIDFFHVDIMDGHFVPNLSMGLRVPHYLKSITDVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + I +ADA DII FH ESS ++ R++ I K VA+NP TP+
Sbjct: 62 IDVHLMVENPELFIPKLADA-ADIIAFHAESSKYLFRTVDMIKEHDAKPIVALNPSTPIG 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+E V++ + +L+MTV PGF GQ I + KI K I + + VDGG+
Sbjct: 121 NVEYVLENLYGVLVMTVEPGFSGQSFINPMLKKIDNLKNKILTEGYNTKIFVDGGINLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ + ++ K +NDL+ SA
Sbjct: 181 APKAVEAGADALIAASAIYGKED---VKKAVNDLRNSA 215
>gi|78779158|ref|YP_397270.1| ribulose-5-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9312]
gi|78712657|gb|ABB49834.1| ribulose-5-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9312]
Length = 252
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 130/230 (56%), Gaps = 11/230 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 13 NRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYC 72
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ F+ LM+S + ++ + +A ++ H E++ H+ R L I +G
Sbjct: 73 NVPFETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSP 132
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--S 171
VA+NP TP ++E+++D +D +L+MTVNPGFGGQ I + + KIR+ + + ++++
Sbjct: 133 SVALNPHTPFEMIENIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIRKIRNFVIEKNLDVD 192
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+EVDGG+ + I AGA+ + GS F L + K A
Sbjct: 193 IEVDGGIKANWTISQCADAGANCFIAGSGMFAYPTLKEGCDDLRKVAKEA 242
>gi|307609463|emb|CBW98957.1| ribulose-phosphate 3-epimerase [Legionella pneumophila 130b]
Length = 204
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Query: 17 SRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSYSDSVFDCHLMISSID 75
+RLGEE+ + KAGA IHFDVMD +VPN++FG + ++ + + D HLM + +D
Sbjct: 2 TRLGEEVDAVMKAGADFIHFDVMDNHYVPNLTFGPAFCDALIKKFPNLPIDVHLMTTPVD 61
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ I A AG I+ HP+++ H+ RSL+ I+ +G + G+ +NP TP+ L +
Sbjct: 62 TLIEAFAKAGAKRISIHPDATIHLDRSLQLINNLGCEAGLVLNPATPIDTLTWCAHNLKF 121
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+L+MTVNPGFGGQ+LI IPK+ + + ++ L VDGGVT +NI SL AGA+ V
Sbjct: 122 VLVMTVNPGFGGQKLIPEVIPKLSKIRQQ--HPNLDLCVDGGVTPQNIASLAHAGANQFV 179
Query: 196 VGSSFFNQKGEISYAKRLND 215
GS+ FN KR+ +
Sbjct: 180 AGSAIFNSSNYSETIKRMRE 199
>gi|309776702|ref|ZP_07671676.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308915450|gb|EFP61216.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 215
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 128/214 (59%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS++ AD++RL +E+ + AGA H DVMDGCFVPNI+ G ++++R+++ ++
Sbjct: 1 MILCPSMMCADYARLKQEVQELEAAGADIFHCDVMDGCFVPNITMGLMDVKTVRAHTKAM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI ++ AG D+I HPE+ P + ++L I A GK G+AINP+T V+
Sbjct: 61 VDVHLMIEHPADKVDWFLQAGADLIYIHPEAEPQVMKTLMYIRAQGKLAGLAINPDTSVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+++++ D ILIM+V PGF GQ I+S KIR+ + + + +DG ++ I+
Sbjct: 121 TIKELLPHCDYILIMSVFPGFAGQSFIQSIDAKIRELISRKQEYGYRIVLDGACSAEVIQ 180
Query: 185 SLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK 217
G D V+G S+ F +G SYA + L+
Sbjct: 181 RYHALGVDGFVLGTSALFQGEG--SYADNIKRLR 212
>gi|268319216|ref|YP_003292872.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii FI9785]
gi|262397591|emb|CAX66605.1| ribulose-phosphate 3-epimerase [Lactobacillus johnsonii FI9785]
Length = 216
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL AD L +I + G + H D+MDG FVPN+S+G ++++ +
Sbjct: 1 MIAPSILNADNMHLSRDIKTAIEGGIDRFHIDIMDGHFVPNLSYGPELVKDFKRSFPLTD 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + +++ + + +AGCD++ FH E++ + ++ + + G+AINP TPV
Sbjct: 61 AEIHLMSNDLETTLPLFVEAGCDLLEFHYEATDNPEYWIKYLKDHNVRCGMAINPSTPVQ 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ + E+D +L+MTV PGFGGQ+ E ++ ++ + K +I ++S +EVDGG+ +
Sbjct: 121 KLQPFLKELDQVLLMTVKPGFGGQKFEEESVERLVELKNMIEAENLSVPIEVDGGIEPKT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA + V GS F +L
Sbjct: 181 LKLTRDAGATIFVAGSYIFKNGSIEDQVMKLKK 213
>gi|215489436|ref|YP_002331867.1| allulose-6-phosphate 3-epimerase [Escherichia coli O127:H6 str.
E2348/69]
gi|312965703|ref|ZP_07779932.1| ribulose-phosphate 3-epimerase [Escherichia coli 2362-75]
gi|215267508|emb|CAS11962.1| allulose-6-phosphate 3-epimerase [Escherichia coli O127:H6 str.
E2348/69]
gi|312289677|gb|EFR17568.1| ribulose-phosphate 3-epimerase [Escherichia coli 2362-75]
Length = 231
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DNHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 DAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQV 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|300120965|emb|CBK21207.2| unnamed protein product [Blastocystis hominis]
Length = 195
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 125/195 (64%), Gaps = 3/195 (1%)
Query: 25 NITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADA 84
I + GA +H D+MDG FVPN++ GA V++ +R + + DCHLM+ + +S+I + DA
Sbjct: 1 MIIEKGADWLHIDIMDGHFVPNLTIGAPVVKCIRKHLNVFMDCHLMVDNPESYIIPLKDA 60
Query: 85 GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG 144
G ++ TFH E++ + + ++ +H G G+ + P TPV+ +E+ I +D++L+MTV PG
Sbjct: 61 GANLFTFHVEATKNPKDVIQRVHEAGMYCGITLKPGTPVSAIEEFIPLVDLVLVMTVEPG 120
Query: 145 FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
FGGQ+ +E + K+ +AL +++ +EVDGGV+++N + + GA++LV GS+ F
Sbjct: 121 FGGQKFMEECLVKVEAVRAL--SKTVYIEVDGGVSAKNAELCARKGANVLVSGSAIFGSA 178
Query: 205 GEISYAKRLND-LKK 218
+ + + + LKK
Sbjct: 179 DIAATIREMKEALKK 193
>gi|45358677|ref|NP_988234.1| Pentose-5-phosphate 3-epimerase [Methanococcus maripaludis S2]
gi|45047543|emb|CAF30670.1| Pentose-5-phosphate 3-epimerase [Methanococcus maripaludis S2]
Length = 219
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + EE+ + H D+MDG FVPN+S G V L+S +D
Sbjct: 2 VMIGASILSADYGHMAEEVKKAEEGNVDFFHVDIMDGHFVPNLSMGLRVPHYLKSITDVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I +ADA D+I FH ESS ++ R++ I K VA+NP TP+
Sbjct: 62 IDVHLMVENPDLFIPKLADA-ADMIAFHAESSKYLFRTVDMIKEHDAKPIVALNPSTPIG 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+E V++ + +L+MTV PGF GQ I I KI K I + VDGG+
Sbjct: 121 NVEYVLENLYGVLVMTVEPGFSGQSFINPMIKKIDNLKNKILTEGYDTKIFVDGGINLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ + ++ K +NDL+ SA
Sbjct: 181 APKAVEAGADGLIAASAIYGKED---VKKAVNDLRNSA 215
>gi|302380659|ref|ZP_07269124.1| ribulose-phosphate 3-epimerase [Finegoldia magna ACS-171-V-Col3]
gi|302311602|gb|EFK93618.1| ribulose-phosphate 3-epimerase [Finegoldia magna ACS-171-V-Col3]
Length = 218
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
+ PS+LA +F L + + + G + +H DVMDG FVPNISFG +I+ +R Y + +F
Sbjct: 4 LSPSLLACNFFELEKNLDILKNKGIRYLHLDVMDGNFVPNISFGPAIIKQIREKYPEFIF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM++ ++ IN I DAG DIITFHPE++ H R ++T+H GKK G+A+NP T +
Sbjct: 64 DCHLMVNKPENIINDILDAGADIITFHPEATFHPHRIIQTVHKAGKKCGLALNPSTGLES 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+ +ID++D+IL+M+VNPGFGGQ IES K+ A+ +I K+ I LEVDGGV + NI
Sbjct: 124 CKYIIDDLDIILVMSVNPGFGGQSFIESQYLKLIDARNMIKASKKDIILEVDGGVKTSNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+++AGADL+V GS FN
Sbjct: 184 DKVLEAGADLIVSGSDVFNHN 204
>gi|295425217|ref|ZP_06817920.1| ribulose-phosphate 3-epimerase [Lactobacillus amylolyticus DSM
11664]
gi|295064993|gb|EFG55898.1| ribulose-phosphate 3-epimerase [Lactobacillus amylolyticus DSM
11664]
Length = 220
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSIL A+ L +EI T AG + H D+MDG FVPN+SFG ++ ++
Sbjct: 1 MGDKMLIAPSILNANNLTLKDEIKRATNAGITRFHIDIMDGHFVPNLSFGPQLVSDFKTE 60
Query: 61 SDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAI 117
+ HLM ++ I AG D++ FH E+ ++ L + + G K G+ +
Sbjct: 61 FPITEAEIHLMSNNPKVLIPAFVKAGADLLEFHYEAMQPNEVKYWLDYLKSNGVKAGLVL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
NP+TP+ ++E ++ID +L+MTV+PGFGGQ+ +E++ +I++A+ L+G + I++EVDGG
Sbjct: 121 NPDTPIPVVEQFKNQIDQLLLMTVHPGFGGQKFLENSASRIKEARELVG-KDIAIEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + + AGA++ V GS F + S +L
Sbjct: 180 INQQTARIAKDAGANVFVAGSYLFEKGDIASQIAKLTQ 217
>gi|126696164|ref|YP_001091050.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9301]
gi|126543207|gb|ABO17449.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9301]
Length = 252
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 78/234 (33%), Positives = 131/234 (55%), Gaps = 11/234 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G + + +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 13 NRPIQIIPSVLPADWANMGACVKELEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYC 72
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ F+ LM+S + ++ + +A ++ H E++ H+ R L I +G
Sbjct: 73 NVPFETQLMVSQYNCETMLESYVNATKGANGEPGVVIAHAEANIHLHRVLGRIRDLGGSP 132
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--S 171
VA+NP TP ++++++D +D +L+MTVNPGFGGQ I + + KIR+ + I ++++
Sbjct: 133 SVALNPHTPFEMIKNIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIREIRNFIIEKNLNVD 192
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+EVDGG+ + I AGA+ + GS F L + + A D
Sbjct: 193 IEVDGGIKANWTISQCAHAGANCFIAGSGMFAYPTLKEGCDDLRKVAQEAQKGD 246
>gi|303234002|ref|ZP_07320651.1| ribulose-phosphate 3-epimerase [Finegoldia magna BVS033A4]
gi|302494927|gb|EFL54684.1| ribulose-phosphate 3-epimerase [Finegoldia magna BVS033A4]
Length = 218
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 97/201 (48%), Positives = 138/201 (68%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
+ PS+LA +F L + + + G + +H DVMDG FVPNISFG +I+ +R Y + +F
Sbjct: 4 LSPSLLACNFFELEKNLDILKNKGIRYLHLDVMDGNFVPNISFGPAIIKQIREKYPEFIF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM++ ++ IN I DAG DIITFHPE++ H R ++T+H GKK G+A+NP T +
Sbjct: 64 DCHLMVNKPENIINDILDAGADIITFHPEATFHPHRIIQTVHKAGKKCGLALNPSTGLES 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+ +ID++D+IL+M+VNPGFGGQ IES K+ A+ +I K+ I LEVDGGV + NI
Sbjct: 124 CKYIIDDLDIILVMSVNPGFGGQSFIESQYLKLIDARNMIKASKKDIILEVDGGVKTSNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+++AGADL+V GS FN
Sbjct: 184 DKVLEAGADLIVSGSDVFNHN 204
>gi|269303060|gb|ACZ33160.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae LPCoLN]
Length = 229
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSI+ AD + LG E + +AG+ IH D+MDG FVPN++FG +I ++ +D
Sbjct: 6 SVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H MI + I +G D I H E+S I+ L I G + G+A +P+T +
Sbjct: 66 FLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSI 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVT 179
L + D++++M+V PGF GQ + +TI KI A+ I + +EVDGG+
Sbjct: 126 EFLPSFLPLCDVVVLMSVYPGFTGQSFLPNTIEKIAFARHAIKTLGLKDSCLIEVDGGID 185
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGAD+LV S F ++ ++ L+
Sbjct: 186 QQSAPLCRDAGADILVTASYLFEA-DSLAMEDKILLLR 222
>gi|33861323|ref|NP_892884.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633900|emb|CAE19225.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 251
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 135/231 (58%), Gaps = 14/231 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G + ++ +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 13 NRPIQIIPSVLPADWANMGACVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYC 72
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+ F+ LM+S + ++ + A ++ H E++ H+ R L I +G
Sbjct: 73 EVPFETQLMVSQYNCETMLEAYVKATKGPNGEPGVVIAHAEANVHLHRVLGKIRDLGGSP 132
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--S 171
VA+NP TP ++E+++D +D +L+MTVNPGFGGQ I + + KIR+ + + ++++
Sbjct: 133 SVALNPHTPFEMIENIMDMVDHVLVMTVNPGFGGQAYIPTMLNKIRKIRNFVIEKNLNVD 192
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+EVDGG+ + I +AGA+ + GS F + + ++L+ AL
Sbjct: 193 IEVDGGIKANWTISQCAEAGANCFIAGSGMFAYP---TLKEGCDELRSVAL 240
>gi|113953349|ref|YP_730888.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9311]
gi|113880700|gb|ABI45658.1| ribulose-phosphate 3-epimerase [Synechococcus sp. CC9311]
Length = 244
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 136/229 (59%), Gaps = 14/229 (6%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
IQI+PS+L AD++ +G+ + ++ AG +I FDVMDG FVPN++FG ++I++ R Y +
Sbjct: 6 RPIQIIPSVLPADWAAMGQCVKDLEDAGVDRIQFDVMDGNFVPNLTFGPELIKACRRYCN 65
Query: 63 SVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
F+ LM+S + ++ + +A ++ H E++ H+ R L I +G
Sbjct: 66 VPFETQLMVSQYNCETMLEEYVEATKGANGEPGVVIAHVEANTHLHRILGRIRQLGGSPS 125
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--L 172
VA+NP TP+ +++DV+D +D +L+MTVNPGFGGQ I + + KI + + I +R++ +
Sbjct: 126 VALNPHTPMEMVKDVLDLVDHVLVMTVNPGFGGQAYIPTMLNKISELRKNIVERNLDVDI 185
Query: 173 EVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
EVDGG+ + I AGA+ + GS F S + +DL++ A
Sbjct: 186 EVDGGIKANWTISQCCAAGANCFIAGSGMFAYP---SLKEGCDDLRRVA 231
>gi|146097880|ref|XP_001468247.1| ribulose-5-phosphate 3-epimerase [Leishmania infantum]
gi|134072614|emb|CAM71329.1| putative ribulose-5-phosphate 3-epimerase [Leishmania infantum
JPCM5]
gi|322502226|emb|CBZ37309.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 263
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 9/223 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITK---AGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
I PSILAADF +LG+E++++ A+ IH DVMDG VPNIS G V+ SLR
Sbjct: 27 EAIIDPSILAADFCKLGDEVASVVSPAGGAAEWIHVDVMDGHMVPNISIGPGVVSSLRAR 86
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ + D H M+S + IA AG TFH E++ + I A G + GVA+ P
Sbjct: 87 FPNVFLDVHCMVSDPKQWVPSIAKAGGSGYTFHIEATNDSKDVAEYIRAHGMQVGVAVKP 146
Query: 120 ETPV-AILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
T + L+D+I+ +D +L+MTV PGFGGQ + + I + + +++ VDG
Sbjct: 147 ATNLTQELKDLIEGHYVDQVLVMTVEPGFGGQSFMHERLSFISELRR--NYPHLNIGVDG 204
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ + AGA++L+ G+S F + + L KS
Sbjct: 205 GIGPSTAEQAADAGANILIAGTSVFRAGDRKAAIEELRASAKS 247
>gi|110644444|ref|YP_672174.1| allulose-6-phosphate 3-epimerase [Escherichia coli 536]
gi|191172040|ref|ZP_03033585.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli F11]
gi|110346036|gb|ABG72273.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli 536]
gi|190907805|gb|EDV67399.1| D-allulose-6-phosphate 3-epimerase AlsE [Escherichia coli F11]
Length = 231
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ + ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM++ +I +A AG D IT HPE+ + R + I G K G+ +NPETPV
Sbjct: 60 LDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEICRHGMKVGLILNPETPV 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
++ I + D I +MTV+PGF GQ I + K+ + KA + + +EVDG
Sbjct: 120 EAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQA 179
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ L+ AGAD+ +VG S FN I A R+
Sbjct: 180 TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212
>gi|302866837|ref|YP_003835474.1| ribulose-phosphate 3-epimerase [Micromonospora aurantiaca ATCC
27029]
gi|315503252|ref|YP_004082139.1| ribulose-phosphate 3-epimerase [Micromonospora sp. L5]
gi|302569696|gb|ADL45898.1| ribulose-phosphate 3-epimerase [Micromonospora aurantiaca ATCC
27029]
gi|315409871|gb|ADU07988.1| ribulose-phosphate 3-epimerase [Micromonospora sp. L5]
Length = 226
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 80/225 (35%), Positives = 124/225 (55%), Gaps = 4/225 (1%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT P + PSILAADF+RL +E+ + A A +H DVMD FVPN++ G V++SLR+
Sbjct: 1 MTVPPPIVAPSILAADFARLADEVRAVEPA-ADWLHVDVMDNHFVPNLTIGLPVVQSLRA 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ FD HLMI+ ADAG +TFH E+ + + + G K G+AI+
Sbjct: 60 VTGIPFDVHLMITDPRRWAPGYADAGAYNVTFHAEACDDPVALAKDLRSAGAKAGLAIDR 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
+TP+ +++ D +LIMT+ GFGGQ+ + + K+R A+ + + +EVDGG
Sbjct: 120 DTPIEPYLELLPSFDTLLIMTIKAGFGGQRFLPQLLDKVRAARRHVDSGHLELRIEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + I+ AGAD V G++ + +RL L + A+
Sbjct: 180 IAADTIEQAAAAGADAFVAGTAVYGADDPAEAVRRLRGLAERAMT 224
>gi|47177012|ref|YP_015623.1| ribulose-phosphate 3-epimerase [Oligotropha carboxidovorans OM5]
gi|47115403|emb|CAG28456.1| ribulose-phosphate-3-epimerase [Oligotropha carboxidovorans OM5]
Length = 202
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 94/187 (50%), Positives = 126/187 (67%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ I AGA IH DVMDG FVPNISFG DVI+++R + VFD HLMI+ +D ++ A
Sbjct: 1 MEAIDAAGADWIHCDVMDGHFVPNISFGPDVIKAIRPRTKKVFDVHLMIAPVDPYLEAFA 60
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
AG D+IT H E+ PH+ RSL+ I +GKK G I P TP +L +V+D +D+IL+M+VN
Sbjct: 61 KAGADVITVHAEAGPHLDRSLQAIRNLGKKAGATICPATPENVLANVLDRLDLILVMSVN 120
Query: 143 PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
PGFGGQQ I S + KIR+ +A+IG+R I LEVDGGV + AGAD +V G++ F
Sbjct: 121 PGFGGQQFISSQLDKIRRIRAMIGERPIRLEVDGGVNVETAAQVAAAGADTVVAGAAVFK 180
Query: 203 QKGEISY 209
+ +Y
Sbjct: 181 GGTQSAY 187
>gi|255310922|ref|ZP_05353492.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 6276]
gi|255317222|ref|ZP_05358468.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 6276s]
Length = 228
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 124/218 (56%), Gaps = 6/218 (2%)
Query: 1 MTPS-IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M + + PSI+ AD + +G E NI ++GA IH DVMDG FVPNI+FG V+ ++
Sbjct: 1 MKKQRVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINR 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ + H MI + + AG D I H E++ +I+ + I G + GVA +P
Sbjct: 61 STELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVD 175
ET + + I D+IL+M+V+PGF GQ+ I TI +I+ K I + S +EVD
Sbjct: 121 ETSIEFVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ + ++ +AGAD+LV S FF +K I+ +++
Sbjct: 181 GGIDKESARACREAGADILVAASYFF-EKDSINMKEKV 217
>gi|166154342|ref|YP_001654460.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 434/Bu]
gi|166155217|ref|YP_001653472.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237802551|ref|YP_002887745.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis B/Jali20/OT]
gi|237804468|ref|YP_002888622.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis B/TZ1A828/OT]
gi|301335594|ref|ZP_07223838.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis L2tet1]
gi|165930330|emb|CAP03816.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 434/Bu]
gi|165931205|emb|CAP06770.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231272768|emb|CAX09674.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273785|emb|CAX10568.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis B/Jali20/OT]
gi|296435637|gb|ADH17811.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis G/9768]
gi|296436560|gb|ADH18730.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis G/11222]
gi|296437497|gb|ADH19658.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis G/11074]
gi|297139996|gb|ADH96754.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis G/9301]
Length = 228
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 123/216 (56%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + PSI+ AD + +G E NI ++GA IH DVMDG FVPNI+FG V+ ++ +
Sbjct: 3 KQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRST 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ + H MI + + AG D I H E++ +I+ + I G + GVA +PET
Sbjct: 63 ELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPET 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGG 177
+ + I D+IL+M+V+PGF GQ+ I TI +I+ K I + S +EVDGG
Sbjct: 123 SIEFVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + ++ +AGAD+LV S FF +K I+ +++
Sbjct: 183 IDKESARACREAGADILVAASYFF-EKDSINMKEKV 217
>gi|110005237|emb|CAK99563.1| probable ribulose-phosphate 3-epimerase protein [Spiroplasma citri]
Length = 226
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 81/220 (36%), Positives = 123/220 (55%), Gaps = 8/220 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS+L+A++ L EE++ I +AGA+ IHFDVMDG FVPN++FG ++ + SYS
Sbjct: 1 MKKYLVAPSVLSANYLILQEELATIKEAGAQWIHFDVMDGDFVPNLTFGPKILADITSYS 60
Query: 62 DSVFDCHLMI----SSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGV 115
D DCHLM+ SS+++++ AG IT H E+ P + L + K G+
Sbjct: 61 DLYLDCHLMVKIKNSSVENYLLPFIKAGASAITLHYEALTPPQLTEFLNLRIKLNIKIGL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LE 173
AI P TPV ++ + +D++L+MTV PGFGGQ I + KI+ + + + + +E
Sbjct: 121 AIKPLTPVKVIFPYLKHLDLVLVMTVEPGFGGQTFISAAATKIKALRDYLDQNNGKTLIE 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
VDGG+ + Q G D+LV GS F + K L
Sbjct: 181 VDGGINAETATLCKQYGVDVLVAGSYLFGHTDLATRLKGL 220
>gi|15604840|ref|NP_219624.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis D/UW-3/CX]
gi|76788836|ref|YP_327922.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis A/HAR-13]
gi|6226026|sp|O84123|RPE_CHLTR RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|3328520|gb|AAC67712.1| Ribulose-P Epimerase [Chlamydia trachomatis D/UW-3/CX]
gi|76167366|gb|AAX50374.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis A/HAR-13]
gi|297748250|gb|ADI50796.1| Ribulose-phosphate 3-epimerase [Chlamydia trachomatis D-EC]
gi|297749130|gb|ADI51808.1| Ribulose-phosphate 3-epimerase [Chlamydia trachomatis D-LC]
Length = 233
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 123/216 (56%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + PSI+ AD + +G E NI ++GA IH DVMDG FVPNI+FG V+ ++ +
Sbjct: 8 KQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRST 67
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ + H MI + + AG D I H E++ +I+ + I G + GVA +PET
Sbjct: 68 ELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPET 127
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGG 177
+ + I D+IL+M+V+PGF GQ+ I TI +I+ K I + S +EVDGG
Sbjct: 128 SIEFVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGG 187
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + ++ +AGAD+LV S FF +K I+ +++
Sbjct: 188 IDKESARACREAGADILVAASYFF-EKDSINMKEKV 222
>gi|255348482|ref|ZP_05380489.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 70]
gi|255503024|ref|ZP_05381414.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis 70s]
gi|255506695|ref|ZP_05382334.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis D(s)2923]
gi|289525163|emb|CBJ14637.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis Sweden2]
gi|296434709|gb|ADH16887.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis E/150]
gi|296438427|gb|ADH20580.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis E/11023]
Length = 228
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 123/216 (56%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + PSI+ AD + +G E NI ++GA IH DVMDG FVPNI+FG V+ ++ +
Sbjct: 3 KQGVLVAPSIMGADLACIGREARNIEESGADFIHIDVMDGHFVPNITFGPGVVAAINRST 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ + H MI + + AG D I H E++ +I+ + I G + GVA +PET
Sbjct: 63 ELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENIKEIVSYIQKCGVQAGVAFSPET 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGG 177
+ + I D+IL+M+V+PGF GQ+ I TI +I+ K I + S +EVDGG
Sbjct: 123 SIEFVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQFVKQAIQVLGREGSCLIEVDGG 182
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + ++ +AGAD+LV S FF +K I+ +++
Sbjct: 183 IDKESARACREAGADILVAASYFF-EKDSINMKEKV 217
>gi|150402292|ref|YP_001329586.1| ribulose-phosphate 3-epimerase [Methanococcus maripaludis C7]
gi|150033322|gb|ABR65435.1| Ribulose-phosphate 3-epimerase [Methanococcus maripaludis C7]
Length = 219
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 119/218 (54%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + +E+ + H D+MDG FVPN+S G V L+S +D
Sbjct: 2 VMIGASILSADYGHMEQEVKKAEEGNVDFFHVDIMDGHFVPNLSMGLRVPHYLKSITDVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I +ADA DII FH ESS ++ R++ I G K VA+NP TP+
Sbjct: 62 IDVHLMVENPDLFIPKLADA-ADIIAFHAESSKYLFRTVDMIKEHGAKPIVALNPSTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+E V++ + +LIMTV PGF GQ I + KI K I + VDGG+
Sbjct: 121 NVEYVLENLYGVLIMTVEPGFSGQSFINPMLKKIDNLKNKILAEGYDTKIFVDGGINLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ + ++ K ++DL+ SA
Sbjct: 181 APKAVEAGADALIAASAIYGKED---VKKAVDDLRNSA 215
>gi|15618109|ref|NP_224394.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae CWL029]
gi|16752856|ref|NP_445126.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae AR39]
gi|33241523|ref|NP_876464.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae TW-183]
gi|6226025|sp|Q9Z8Z9|RPE_CHLPN RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|4376454|gb|AAD18338.1| Ribulose-P Epimerase [Chlamydophila pneumoniae CWL029]
gi|7189496|gb|AAF38401.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae AR39]
gi|33236031|gb|AAP98121.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae TW-183]
Length = 229
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSI+ AD + LG E + +AG+ IH D+MDG FVPN++FG +I ++ +D
Sbjct: 6 SVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H MI + I +G D I H E+S I+ L I G + G+A +P+T +
Sbjct: 66 FLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSI 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVT 179
L + D++++M+V PGF GQ + +TI KI A+ I + +EVDGG+
Sbjct: 126 EFLPSFLPFCDVVVLMSVYPGFTGQSFLPNTIEKIAFARHAIKTLGLKDSCLIEVDGGID 185
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGAD+LV S F ++ ++ L+
Sbjct: 186 QQSAPLCRDAGADILVTASYLFEA-DSLAMEDKILLLR 222
>gi|322494658|emb|CBZ29960.1| putative ribulose-5-phosphate 3-epimerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 255
Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 120/223 (53%), Gaps = 9/223 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITK---AGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
I PSILAADF +LG+E++++ + IH DVMDG VPNIS G V+ SLR +
Sbjct: 27 EAIIDPSILAADFCKLGDEVASVVSPAGGAVEWIHVDVMDGHMVPNISMGPGVVSSLREH 86
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D H M+S+ + + +A AG TFH E++ + + I A G + GVA+ P
Sbjct: 87 FPNLFLDVHCMVSNPEQWVPSMAKAGGSGYTFHIEATNDSKGVAKHIRAHGMQVGVAVKP 146
Query: 120 ETPV-AILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
+ L+++I+ +D +L+MTV PGFGGQ I+ + I + + +++ VDG
Sbjct: 147 AANLTQELKELIEGHYVDQVLVMTVEPGFGGQSFIQERLSFISELRR--NYPHLNIGVDG 204
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ + AGA++L+ G+S F + + L KS
Sbjct: 205 GIGPGTAEQAADAGANILIAGTSVFKAGDRKAVIEELRASAKS 247
>gi|295109328|emb|CBL23281.1| Pentose-5-phosphate-3-epimerase [Ruminococcus obeum A2-162]
Length = 224
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 84/217 (38%), Positives = 127/217 (58%), Gaps = 7/217 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ D + +I + K G H D+MD FVPNI+ D I++L+ S + D
Sbjct: 6 VSPSLMCVDLMNVQSDIEKLEKVGVDYFHVDMMDNHFVPNITLSTDFIKALKKISKTPLD 65
Query: 67 CHLMISSIDSHINIIADAG-CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
H+MI + I + DII H ES+ H ++ L +I AMG K G+AINP TPV +
Sbjct: 66 IHMMIEHPEQTIPELTCCDENDIICIHYESTLHPQKVLASIRAMGVKAGIAINPATPVCV 125
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSRN 182
LED++ ++DM+L MTVNPGF GQ+LI +T+ KI + + L+ ++ S +E DG V+ N
Sbjct: 126 LEDILPDVDMVLCMTVNPGFAGQKLIPATLDKITRIRKLLNEKGYSEVLIEADGNVSFEN 185
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKK 218
+ AGAD+ V G SS F++ G + + L +K
Sbjct: 186 AVKMHAAGADIYVAGTSSIFSKAGTLE--ENLEKFRK 220
>gi|293192810|ref|ZP_06609705.1| ribulose-phosphate 3-epimerase [Actinomyces odontolyticus F0309]
gi|292820057|gb|EFF79055.1| ribulose-phosphate 3-epimerase [Actinomyces odontolyticus F0309]
Length = 220
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E++ I AGA H DVMD FVPN+S+G V ++ D
Sbjct: 5 ISPSILNCDIANLRGELTKI--AGADIAHVDVMDNHFVPNLSWGLPVAEAVVKSGILPVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+ GC+ +TFH E++ R R +H +G +TG+A+ P T +A
Sbjct: 63 AHLMIEDPDRWAPQYAEVGCESVTFHAEAAAAPLRLARELHRIGARTGLALKPATDIAPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIK 184
D+++E DMILIMTV PGFGGQ IE IPKI + + I + S++VDGG++ I+
Sbjct: 123 VDILNEFDMILIMTVEPGFGGQSFIEQMIPKIERTRTAINAAGLQVSIQVDGGISRATIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGAD V GS+ F + L +L +
Sbjct: 183 RAAAAGADNFVAGSAVFRADDAHREVEALRELANA 217
>gi|315604187|ref|ZP_07879253.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313893|gb|EFU61944.1| ribulose-phosphate 3-epimerase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 220
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 84/215 (39%), Positives = 116/215 (53%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL D + L E++ I AGA H DVMD FVPN+S+G V ++ D
Sbjct: 5 ISPSILNCDIADLRGELNKI--AGADVAHVDVMDNHFVPNLSWGLPVAEAVVKSGILPVD 62
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+ GC +TFH E++ R R +H +G + G+A+ P T +A
Sbjct: 63 AHLMIEDPDRWAPGYAEVGCHSVTFHAEAAAAPLRLARELHRLGARAGLALKPATDIAPF 122
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D+++E DMILIMTV PGFGGQ IE IPKI + + I + ++VDGG++ I+
Sbjct: 123 VDILNEFDMILIMTVEPGFGGQSFIEQMIPKIERTRRAINAAGLEVSIQVDGGISRTTIE 182
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AGAD V GS+ F + L +L +
Sbjct: 183 RAAAAGADNFVAGSAVFRADDAHREVEVLRELANA 217
>gi|257068773|ref|YP_003155028.1| ribulose-5-phosphate 3-epimerase [Brachybacterium faecium DSM 4810]
gi|256559591|gb|ACU85438.1| ribulose-5-phosphate 3-epimerase [Brachybacterium faecium DSM 4810]
Length = 228
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 83/214 (38%), Positives = 123/214 (57%), Gaps = 4/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSIL ADF +G E+ I A A +H DVMD FVPN++FGA ++ + S D
Sbjct: 12 IHPSILNADFMSIGTELDRI--ATADSVHVDVMDNHFVPNLTFGASMVEQIVERSAIPVD 69
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI D A+AG +TFH E++ + R + + GVA+ P T V L
Sbjct: 70 AHLMIEDADDEAPAYAEAGAASVTFHLEAARAPVKLARDLRRKNTQAGVALRPATAVEPL 129
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIK 184
D+I E DM+L+MTV PGFGGQ +++ +PKIR+A+A I + ++ ++VDGGV+ I+
Sbjct: 130 LDIIGEFDMLLLMTVEPGFGGQSFLDTMLPKIRRARAAISEANLEVSIQVDGGVSRETIE 189
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+AGA++ V GS+ + + L +L +
Sbjct: 190 RCAEAGANIFVAGSAIYRAQDAAEEISALRELAQ 223
>gi|150015437|ref|YP_001307691.1| ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
gi|149901902|gb|ABR32735.1| Ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
Length = 219
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 90/215 (41%), Positives = 131/215 (60%), Gaps = 3/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SD 62
+++ PSIL A+F +L E I + K G K++H D+MDG FVPNI+FG D I+ ++ D
Sbjct: 2 EVKLSPSILGANFLKLEETIVKLKKQGIKELHIDIMDGHFVPNIAFGIDQIKMIKQIACD 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+++ + I+ + +AG + IT H ESSPHI + I + G K GVA+NP TP
Sbjct: 62 IELDVHLMVTNPEIFIDALVEAGANTITIHQESSPHIYNLMYIIKSFGIKVGVALNPATP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTS 180
+ L+ + ++ ILIMTV PGFGGQ IE + KI + I +I L+VDGG+
Sbjct: 122 INTLKHISHMVNKILIMTVEPGFGGQSFIEPMMEKINEVSNFIKSENIECELQVDGGINL 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI +V+ GA +VVGS+ F ++ S KR +
Sbjct: 182 ENIGKVVENGATNIVVGSAIFREEDIDSTIKRFRE 216
>gi|307297432|ref|ZP_07577238.1| ribulose-phosphate 3-epimerase [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916692|gb|EFN47074.1| ribulose-phosphate 3-epimerase [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 215
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 4/215 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSILAAD + L E+ + A +H DVMDG FVPNI+FG ++ +L
Sbjct: 3 RISPSILAADLTELAREVIRVRD--ADYLHIDVMDGMFVPNITFGVPIMEALGRLHHPPL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI ++ A G + H E + H+ R L I G + V +NP TPV++
Sbjct: 61 DVHLMIEDPSRYVKEYAALGAKNLHVHVEGNYHLHRLLGQIRETGSRAFVVLNPSTPVSL 120
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L++V+ D +L+MTVNPG+ GQ+ I KI + +R + + VDGGV+ N
Sbjct: 121 LDEVLSCADGVLVMTVNPGYTGQEFIPEAAKKIDVLDRIRTERDLKFEIAVDGGVSLDNA 180
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ LV GAD+L++G++ F + +++ +LK+
Sbjct: 181 QDLVNRGADILIMGAAVFRSENPSVVVRKIKELKR 215
>gi|87306939|ref|ZP_01089085.1| Ribulose-phosphate 3-epimerase [Blastopirellula marina DSM 3645]
gi|87290312|gb|EAQ82200.1| Ribulose-phosphate 3-epimerase [Blastopirellula marina DSM 3645]
Length = 197
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 115/198 (58%), Gaps = 2/198 (1%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + AG K +H DVMDG FVPNIS+G ++ + R +D D HLMI +I
Sbjct: 1 MERLLAAGVKALHLDVMDGIFVPNISYGMPIVAAFRKLTDLPLDVHLMIEKPQDYIRQFH 60
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+AG D++T H E+ + LR I ++G GVAINP+TP+ + D + E D+ L+M+VN
Sbjct: 61 EAGADVMTIHAEAVDDVASILREIKSLGAGAGVAINPDTPLETIVDALPEADLALMMSVN 120
Query: 143 PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
GFGGQ+ + KIR+ + L + +E+DGGV I +AGADLLVVGS+ F
Sbjct: 121 AGFGGQKFNPVALDKIREVRRL--APDLLIEIDGGVNLDTIGRCTEAGADLLVVGSAIFG 178
Query: 203 QKGEISYAKRLNDLKKSA 220
+ ++ + LN +A
Sbjct: 179 KPDYVTAVRELNSAAAAA 196
>gi|256961115|ref|ZP_05565286.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|293384061|ref|ZP_06629955.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|293386875|ref|ZP_06631445.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|312907988|ref|ZP_07766971.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|312978484|ref|ZP_07790222.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
gi|256951611|gb|EEU68243.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|291078541|gb|EFE15905.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|291083709|gb|EFE20672.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|310626079|gb|EFQ09362.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|311288633|gb|EFQ67189.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
Length = 214
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 126/204 (61%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI AD L ++I+ + + + +H D+MDG FV NI+FG + I ++ S +F
Sbjct: 3 QILPSIFGADIMHLQDDINFLEEENTQILHVDLMDGNFVSNIAFGPNQIAEMKKNSTMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ HI+ + G ++I+ H ES+PHI L+ I G+K GV INP T +
Sbjct: 63 DVHMMVKHPKDHIDDVLATGAEMISVHYESTPHIHSILQKIRQAGRKAGVVINPGTSEVV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE ++D+ID ILIMT+NPG GQ I ++ KIR K LIG R I +EVDGGV +
Sbjct: 123 LEYLLDDIDYILIMTINPGQPGQSFIPKSLEKIRNTKQLIGHRKIDIEVDGGVNKEIAEK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
V+AGA+L+VVG + F+ + Y
Sbjct: 183 CVKAGAELIVVGGALFSGDKQAQY 206
>gi|89898264|ref|YP_515374.1| ribulose-phosphate 3-epimerase [Chlamydophila felis Fe/C-56]
gi|89331636|dbj|BAE81229.1| ribulose-phosphate 3-epimerase [Chlamydophila felis Fe/C-56]
Length = 231
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 5/215 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+ + + +G E I AGA IH D+MDG FVPN++FG VI ++ ++ +
Sbjct: 11 IAPSIMGGNLACIGTEAKRIEAAGADLIHIDIMDGHFVPNLTFGPGVIAAINRSTNLFLE 70
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H MI + I +G D I H E+S +++ L I G + G+A +PET + +
Sbjct: 71 VHAMIYTPFDFIEAFVKSGADRIIVHFEASENLKELLSYIKKCGIQAGLAFSPETSIEFI 130
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVTSRN 182
++ D++L+M+V+PGF GQ I KIR K I + +EVDGG+ +
Sbjct: 131 PPLLPFCDVVLLMSVHPGFCGQSFIADVPDKIRFTKQAIKTMGLEDSCLIEVDGGIDEAS 190
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K +AGAD+LV S F Q+ E++ +++ L+
Sbjct: 191 AKICREAGADILVAASYMF-QQDELTMEEKVLLLR 224
>gi|123966052|ref|YP_001011133.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9515]
gi|123200418|gb|ABM72026.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str. MIT
9515]
Length = 251
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 130/230 (56%), Gaps = 11/230 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
IQI+PS+L AD++ +G + ++ +AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 13 NRPIQIIPSVLPADWANMGGCVKDLEEAGVDRIQFDVMDGNFVPNLTFGPEMIAACRKYC 72
Query: 62 DSVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKT 113
F+ LM+S + ++ + ++ ++ H ES+ H+ R L I +G
Sbjct: 73 KVPFETQLMVSQYNCETMLESYVNSTKGPNGEPGVVIAHAESNVHLHRILGRIRDLGGSP 132
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SIS 171
VA+NP TP ++E+++D +D +L+MTVNPGFGGQ I + + KIR+ + + ++ +I
Sbjct: 133 SVALNPHTPFEMIENIMDMVDHVLVMTVNPGFGGQAYIPTMLSKIRKIREFVIEKNLNID 192
Query: 172 LEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+EVDGG+ + I AGA+ + GS F L + + A
Sbjct: 193 IEVDGGIKANWTISQCAAAGANCFIAGSGMFAYPTLKEGCDELRSVAQDA 242
>gi|300361947|ref|ZP_07058124.1| possible ribulose-phosphate 3-epimerase [Lactobacillus gasseri
JV-V03]
gi|300354566|gb|EFJ70437.1| possible ribulose-phosphate 3-epimerase [Lactobacillus gasseri
JV-V03]
Length = 216
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL AD L +I ++G ++ H D+MDG FVPN+S+G ++++ +
Sbjct: 1 MIAPSILNADNMHLSRDIKAAIESGIERFHIDIMDGHFVPNLSYGPELVKDFKRSFPFTK 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++D+ + + +AGCDI+ FH E++ L + + G+AINP TPV
Sbjct: 61 AEIHLMSNNLDTTLPLFVEAGCDILEFHYEATNKPDYWLNYLKDHNVRCGMAINPSTPVN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ ++++D +L+MTV PGFGGQ+ E ++ ++ + + +I ++ +EVDGG+
Sbjct: 121 KLKPFLNKLDQVLLMTVKPGFGGQKFEEVSVDRLTELQDMIKNENLDLPIEVDGGIDRET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA + V GS F +L
Sbjct: 181 LKLTRDAGAKIFVAGSYIFKNGSIEDQVMKLKK 213
>gi|189241698|ref|XP_970643.2| PREDICTED: similar to DNA replication licensing factor MCM2
[Tribolium castaneum]
Length = 947
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 3/199 (1%)
Query: 24 SNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVFDCHLMISSIDSHINIIA 82
+ + GA +H DVMDG FVPN+S G V++ LR + F+ H+M+S + +A
Sbjct: 656 ARLLDNGADYLHLDVMDGHFVPNLSIGHPVVKCLRNKIRTAFFETHMMVSEPGKWVEPMA 715
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+AG + TFH E + R + G + G+A+ P T + + ID DMILIMTV
Sbjct: 716 EAGVNQYTFHIEPVKDVIPLCRKVREAGMQVGLALKPGTGIEAVRQYIDHADMILIMTVE 775
Query: 143 PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
PGFGGQ+ + +PK++ + + +EVDGGV I + +AGA+++V G++ N
Sbjct: 776 PGFGGQKFMGEMMPKVQWLRH--NYPGLDIEVDGGVGLNTITACAEAGANMIVSGTAIIN 833
Query: 203 QKGEISYAKRLNDLKKSAL 221
+ + L + +S++
Sbjct: 834 ANDQKAVIASLRETVESSI 852
>gi|116515269|ref|YP_802898.1| hypothetical protein BCc_351 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116257123|gb|ABJ90805.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 220
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 135/218 (61%), Gaps = 3/218 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I+PSIL+ADF LG E+ + +AG + IHFD+MD +VPN + G +++S+++ +
Sbjct: 1 MKKFLIIPSILSADFCYLGNELHKLLRAGCQLIHFDLMDNHYVPNFTIGPMILKSVKNNN 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
FD LM SS DS I + AD IT HPE++ + R++ I +G G+A+NP
Sbjct: 61 IPVFFDVPLMASSGDSLIPLFADLNVKFITIHPETTNPLPRTIPLIKKIGCNVGLALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGV 178
T + L+ +I E+D+IL+M VNPGFGGQ +++T KI+ + LI K+ +I L VDGGV
Sbjct: 121 TSLNCLDYIIKELDLILVMAVNPGFGGQVFLKNTFKKIKPIRYLINKKKSNILLSVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
NI ++ +GAD LV+GS+ FN K + K ++
Sbjct: 181 NQSNILKIIDSGADYLVIGSAIFNFKNYLKTIKNFQNI 218
>gi|229544984|ref|ZP_04433709.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|229309876|gb|EEN75863.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
Length = 214
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 126/204 (61%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI AD L ++I+ + + + +H D+MDG FV NI+FG + I ++ S +F
Sbjct: 3 QILPSIFGADIMHLQDDINFLEEENTQILHVDLMDGNFVSNIAFGPNQIAEMKKNSTMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ HI+ + G ++I+ H ES+PHI L+ I G+K GV INP T +
Sbjct: 63 DVHMMVKHPKDHIDDVLATGAEMISVHYESTPHIHSILQKIRQAGRKAGVVINPGTSEVV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE ++D+ID ILIMT+NPG GQ I ++ KIR K LIG R I +EVDGGV +
Sbjct: 123 LEYLLDDIDYILIMTINPGQPGQTFIPKSLEKIRNTKQLIGDRKIDIEVDGGVNKEIAEK 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
V+AGA+L+VVG + F+ + Y
Sbjct: 183 CVKAGAELIVVGGALFSGDKQAQY 206
>gi|156103193|ref|XP_001617289.1| D-ribulose-5-phosphate 3-epimerase [Plasmodium vivax SaI-1]
gi|148806163|gb|EDL47562.1| D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium vivax]
Length = 227
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 68/223 (30%), Positives = 118/223 (52%), Gaps = 12/223 (5%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ I PS+LA++ S+L EE + + GA+ IH DVMD FVPN+SFG VI L+
Sbjct: 1 MSSLKAIIAPSVLASNISKLAEETQRMEELGAEWIHLDVMDMHFVPNLSFGPPVINDLKK 60
Query: 60 YSD-SVFDCHLMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTG 114
Y+ FD HLM+ + + +++ + D +TFH E+ + + + I + G
Sbjct: 61 YTKGIFFDVHLMVENPEKYVDSLK--TSDQLTFHFEALNEDTDKCIKLAQQIRDSNRWCG 118
Query: 115 VAINPETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
++I P+T V + ++D I+ +L+MTV PGFGGQ + + K+ + + +++
Sbjct: 119 ISIKPKTDVEKIVPLLDTNLINTVLVMTVEPGFGGQSFMHDMMSKVAFLRK--KYKDLNI 176
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+VDGG+ + GA+++V G+S F + +
Sbjct: 177 QVDGGLNIETTEISASHGANVIVAGTSIFKADNPKFVIDTMRE 219
>gi|332289192|ref|YP_004420044.1| allulose-6-phosphate 3-epimerase [Gallibacterium anatis UMN179]
gi|330432088|gb|AEC17147.1| allulose-6-phosphate 3-epimerase [Gallibacterium anatis UMN179]
Length = 225
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 67/216 (31%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PS++ D + ++I + + H D+MDG +VPN++ ++ + +
Sbjct: 1 MKKILISPSLMCMDLLKFKQQIEFLDQH-VDYFHIDIMDGHYVPNLTLSPFFVQQVNRIA 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
DCHLM++ +++I+ +A AG D+IT H E+ S R I + K G+ NPE
Sbjct: 60 TKPLDCHLMVTKPENYIDDLAKAGADMITLHVETISGQAFRLFEKIRKLDMKVGLIFNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ + + +ID + ++TV+PGF GQ I + KI + K + ++ +E+DG
Sbjct: 120 TPIEAAKYYLHKIDKVTVLTVDPGFAGQSFIPEMLDKIEELKKYREQNKLNYLIEIDGSC 179
Query: 179 TSRNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ K+L+ GAD+ +VGSS FN +I A +
Sbjct: 180 NPKTFKTLLNVGADVFIVGSSGLFNNNPDIEMAWNI 215
>gi|257076717|ref|ZP_05571078.1| ribulose-phosphate 3-epimerase [Ferroplasma acidarmanus fer1]
Length = 213
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PSI++++ LG +I AGA H D+MDG FV NI+ G D++ ++R ++
Sbjct: 1 MEISPSIISSNLLELGTQIKECQDAGAGSFHLDIMDGHFVDNITMGPDLVAAIRKGTNLR 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLMI D + +AG D++ H E+ + ++ + G+ INP+T V
Sbjct: 61 LDCHLMIERPDRYYKSFINAGADVLLIHYETPIEVINLIKKFQDENIRYGIVINPDTDVK 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ +I +++L+M+V PGF GQ+ IE ++ K++ + I + + +E+DGG+ +
Sbjct: 121 KIYKLIPGSEIVLVMSVFPGFSGQKFIEKSLEKVKALREFIDENNYSTRIEIDGGINNET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K V+AGAD+LV S F G K+L L
Sbjct: 181 GKLAVEAGADILVSASYIFK-NGINESIKKLKSL 213
>gi|169824366|ref|YP_001691977.1| ribulose-phosphate 3-epimerase [Finegoldia magna ATCC 29328]
gi|167831171|dbj|BAG08087.1| ribulose-phosphate 3-epimerase [Finegoldia magna ATCC 29328]
Length = 218
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 96/201 (47%), Positives = 138/201 (68%), Gaps = 3/201 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
+ PS+LA +F L + + + G + +H DVMDG FVPNISFG +I+ +R Y + +F
Sbjct: 4 LSPSLLACNFFELEKNLDILKNKGIRYLHLDVMDGNFVPNISFGPAIIKQIREKYPEFIF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLM++ ++ IN I DAG DIITFHPE++ H R ++T+H GKK G+A+NP T +
Sbjct: 64 DCHLMVNKPENVINDILDAGADIITFHPEATFHPHRIIQTVHKAGKKCGLALNPSTGLES 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+ +ID++D+IL+M+VNPGFGGQ IES K+ A+ +I K+ I LEVDGGV + NI
Sbjct: 124 CKYIIDDLDIILVMSVNPGFGGQSFIESQYLKLIDARNMIKASKKDIILEVDGGVKTSNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
++++GADL+V GS FN
Sbjct: 184 DKVLESGADLIVSGSDVFNHN 204
>gi|294891829|ref|XP_002773759.1| Ribulose-phosphate 3-epimerase, putative [Perkinsus marinus ATCC
50983]
gi|239878963|gb|EER05575.1| Ribulose-phosphate 3-epimerase, putative [Perkinsus marinus ATCC
50983]
Length = 254
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 26/240 (10%)
Query: 1 MTPSIQ--IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
M+ S + + PS+LAADF+ L + + K GA +H D MDG FVPN+SFG V+ SL
Sbjct: 1 MSTSCKAIVAPSVLAADFANLAHDCDEVVKGGADWLHLDFMDGHFVPNLSFGFPVVESLD 60
Query: 59 SYSDS----------VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR---RSLRT 105
Y FD H+M+S+ I + GC+ + FH E+ R +
Sbjct: 61 KYYKKQESETGHAHPFFDAHIMVSNPMQWIEDLKKCGCNQVDFHIEAVKDHDECLRVCQA 120
Query: 106 IHAMGKKTGVAINPETPVAILEDVID----------EIDMILIMTVNPGFGGQQLIESTI 155
I G + G+A+ P+TP++ ++ V+D ID +L+MTV PGFGGQ+ + +
Sbjct: 121 IREKGMRVGIAVKPKTPISAVQSVLDIGRKDGAEKAIIDDLLVMTVEPGFGGQKFMPDMM 180
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K+ +A+ G S+ + VDGG+ S AGA+++V GS+ F S +
Sbjct: 181 VKVEEARKRYG-HSLDITVDGGLNSTTSIVAGDAGANVIVAGSAVFRTSEPESVIGVIRK 239
>gi|255028964|ref|ZP_05300915.1| hypothetical protein LmonL_06916 [Listeria monocytogenes LO28]
Length = 223
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PS++ ADFS L E+ + KAG+ H D+MDG FVP+ G +R
Sbjct: 1 MSKKL-ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + D HLMI + ++ + AD G DII HPE+ H R+L I GKK G+AINP
Sbjct: 60 TQKLVDVHLMIMNPGDYVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +A +++++ +D +++MTVNPGF GQ+ ++ KI + L + + VDG ++
Sbjct: 120 TAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELKKDYTFEIMVDGAISP 179
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSAL 221
I L Q G V+G S+ +K SYA+ + LK+ +
Sbjct: 180 EKISKLSQLGVKGFVLGTSALLRKK--ESYAEIIKKLKQEKM 219
>gi|70939366|ref|XP_740235.1| D-ribulose-5-phosphate 3-epimerase [Plasmodium chabaudi chabaudi]
gi|56517810|emb|CAH84319.1| D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium chabaudi
chabaudi]
Length = 227
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 128/227 (56%), Gaps = 15/227 (6%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+
Sbjct: 1 MTKIEAIIAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPPVINNLKK 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRT---IHAMGKKTG 114
Y+ + FD HLM+ + + +++++ + +TFH E+ + + + + I + G
Sbjct: 61 YTNNIFFDVHLMVENPEKYVSLLK--TSNQLTFHFEALNEDVEKCIELAKVIKSNNMWCG 118
Query: 115 VAINPETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
++I P+T V L +ID ID +L+MTV PGFGGQ + + K+ + +++++
Sbjct: 119 ISIKPKTSVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNI 176
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+VDGG+ + GA+++V G+S FN + +N ++KS
Sbjct: 177 QVDGGLNIETTEISASHGANIIVAGTSIFNAEDPQFV---INTMRKS 220
>gi|170718710|ref|YP_001783901.1| allulose-6-phosphate 3-epimerase [Haemophilus somnus 2336]
gi|168826839|gb|ACA32210.1| Ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
Length = 228
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 5/216 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ I PS++ D ++ E+I + + A H D+MDG +VPN++ + ++ +
Sbjct: 2 KVFISPSLMCMDLTKFKEQIEFLDQKVA-YFHIDIMDGHYVPNLTLSPFFVSQVKKLATK 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
DCHLM+++ +++I+ +A AGCD+IT H E+ S R + I + K G+ NPETP
Sbjct: 61 PLDCHLMVTNPENYIDDLAKAGCDMITLHVETISGQAFRLIEKIRYLEMKVGIIFNPETP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTS 180
+ + + + D + I+TV+PGF GQ I + K+ + K + + +E+DG
Sbjct: 121 IEKAKYYLSKADKVTILTVDPGFAGQSFIPEMLEKVAELKLFRETHQLNYEIEIDGSCNP 180
Query: 181 RNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRLND 215
+ + L++AGAD+L+VGSS FN I A + +
Sbjct: 181 KTYEMLIKAGADVLIVGSSGLFNNSDNIVEAWDMLE 216
>gi|159905935|ref|YP_001549597.1| ribulose-phosphate 3-epimerase [Methanococcus maripaludis C6]
gi|159887428|gb|ABX02365.1| Ribulose-phosphate 3-epimerase [Methanococcus maripaludis C6]
Length = 219
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 117/218 (53%), Gaps = 6/218 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + +E+ + H D+MDG FVPN+S G V L+S +D
Sbjct: 2 VMIGASILSADYGHMEQEVKKAEEGNVDFFHVDIMDGHFVPNLSMGLRVPHYLKSITDVP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + D I +ADA D+I FH ESS ++ R++ I K VA+NP TP+
Sbjct: 62 IDVHLMVENPDLFIPKLADA-ADMIAFHAESSKYLFRTVDMIKEHDAKPIVALNPSTPIN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+E V++ + +LIMTV PGF GQ I + KI K I + DGG+
Sbjct: 121 NVEYVLENLYGVLIMTVEPGFSGQSFINPMLKKIDNLKNKILAEGYDTKIFADGGINLET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V+AGAD L+ S+ + ++ K ++DL+ SA
Sbjct: 181 APKAVEAGADALIAASAIYGKED---VKKAVDDLRNSA 215
>gi|237808716|ref|YP_002893156.1| allulose-6-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
gi|237500977|gb|ACQ93570.1| Ribulose-phosphate 3-epimerase [Tolumonas auensis DSM 9187]
Length = 227
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 118/213 (55%), Gaps = 5/213 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I PS++ D + E+I I + A H D+MDG FVPN++ ++ ++ +
Sbjct: 1 MKISPSLMCMDLLKFKEQIEFIDQH-ADYFHIDIMDGHFVPNLTLSPFFVQQVKRVATKP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
DCHLM+++ +I + +G IT HPE+ S R + I +G K G+ +NPE+P+
Sbjct: 60 LDCHLMVTNPQDYIEPLVQSGAGFITLHPETLSGQAFRLIEKIQNLGVKIGLILNPESPI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSR 181
+++ I ++D I +MTV+PGF GQ + + KI+Q K + + +E+DG
Sbjct: 120 EMIKYYIHKVDKITVMTVDPGFAGQSFVPEMLDKIKQLKIYREENKLNYEIEIDGSCNKN 179
Query: 182 NIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
K L++AGAD+ +VGSS FN + A +
Sbjct: 180 TYKQLIEAGADVFIVGSSGLFNNAPVLEDAWSI 212
>gi|221061399|ref|XP_002262269.1| d-ribulose-5-phosphate 3-epimerase [Plasmodium knowlesi strain H]
gi|193811419|emb|CAQ42147.1| d-ribulose-5-phosphate 3-epimerase, putative [Plasmodium knowlesi
strain H]
Length = 227
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 70/223 (31%), Positives = 119/223 (53%), Gaps = 12/223 (5%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M+ I PS+LA++ S+L EE + + GA+ IH DVMD FVPN+SFG VI L+
Sbjct: 1 MSSLKAIIAPSVLASNISKLAEETQRMEELGAEWIHLDVMDMHFVPNLSFGPPVINDLKK 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTG 114
Y+ D FD HLM+ + + +++++ D +TFH E+ + + + I + G
Sbjct: 61 YTKDIFFDVHLMVENPEKYVDLLK--TSDQLTFHFEALNEDTDKCVKLAQQIRNNNQWCG 118
Query: 115 VAINPETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
V+I P+T V + ++D I+ +L+MTV PGFGGQ + + K+ + +++
Sbjct: 119 VSIKPKTNVEKIVPLLDTNLINTVLVMTVEPGFGGQSFMHDMMSKVAFLRK--KYTDLNI 176
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+VDGG+ + GA+++V G+S F + +
Sbjct: 177 QVDGGLNIETTEISASHGANVIVAGTSIFKADNPKFVIDTMRE 219
>gi|45657427|ref|YP_001513.1| ribulose-5-phosphate 3-epimerase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600666|gb|AAS70150.1| ribulose-5-phosphate 3-epimerase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 215
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 126/214 (58%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA + L + + N IH DVMDG FVP ISFG + + ++S +
Sbjct: 1 MKISASILATKLTELVKTVPNYDPTAIDLIHMDVMDGNFVPQISFGEALTKEVKSLTSIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM++ ++H+ + ITFH E++ R + I + G K GV++NP TPV+
Sbjct: 61 LDVHLMVAKPENHVFKYYEFNPYCITFHIETTDFPIRLAQEIKSHGTKVGVSLNPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE+V+ +D+IL+MTV PGF GQ+ I + + KIR+ K LIG R I LEVDGGV NI+
Sbjct: 121 SLENVLPYVDLILLMTVEPGFYGQKFIINGMDKIRKVKELIGSRPIELEVDGGVNDTNIQ 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + G D++VVG+ + + AK L L +
Sbjct: 181 ELRKNGVDIVVVGAGLYKTGNPVENAKNLKYLAR 214
>gi|24215094|ref|NP_712575.1| ribulose-5-phosphate 3-epimerase [Leptospira interrogans serovar
Lai str. 56601]
gi|24196152|gb|AAN49593.1| ribulose-5-phosphate 3-epimerase [Leptospira interrogans serovar
Lai str. 56601]
Length = 215
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 126/214 (58%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILA + L + + N +H DVMDG FVP ISFG + + ++S +
Sbjct: 1 MKISASILATKLTELVKTVPNYDPTAIDLMHMDVMDGNFVPQISFGEALTKEVKSLTSIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM++ ++H+ + ITFH E++ R + I + G K GV++NP TPV+
Sbjct: 61 LDVHLMVAKPENHVFKYYEFNPYCITFHIETTDFPIRLAQEIKSHGTKVGVSLNPGTPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
LE+V+ +D+IL+MTV PGF GQ+ I + + KIR+ K LIG R I +EVDGGV NI+
Sbjct: 121 SLENVLPYVDLILLMTVEPGFYGQKFIINGMDKIRKVKELIGSRPIEIEVDGGVNDTNIQ 180
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + G D++VVG+ + + AK L L +
Sbjct: 181 ELRKNGVDIVVVGAGLYKTGNPVENAKNLKYLAR 214
>gi|404536|gb|AAB27778.1| pentose-5-phosphate 3-epimerase [Rhodospirillum rubrum]
Length = 219
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 82/195 (42%), Positives = 124/195 (63%), Gaps = 10/195 (5%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +I+I PS+L+ADF+ + + GA +HFDVMD +VPN++ G V +LR +
Sbjct: 1 MTRAIRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HLM +D I+ A+AG D+ITFHPE+S H+ RS++ I G K GVA+NP
Sbjct: 61 TSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASDHVHRSVQMIRKRGLKAGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA-----KALIGKRSISLEVD 175
+P+++L+ +++++D++LIM+VNPGFGGQ I S +PKI +A G R VD
Sbjct: 121 SPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPKIAALANGRRRACRGDR-----VD 175
Query: 176 GGVTSRNIKSLVQAG 190
GGV + ++L + G
Sbjct: 176 GGVNPADARALARPG 190
>gi|150015118|ref|YP_001307372.1| ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
gi|149901583|gb|ABR32416.1| Ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
Length = 223
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L+A+ ++ + + IH D+MDG +VPNIS G D + SLR +D+ F
Sbjct: 4 IISPSLLSANVCNYSDDFKVFNEKNIQVIHIDIMDGHYVPNISIGLDQVASLRKLTDAEF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+++ D + + +AG + IT H E + H+ +S+ + + G K GVA+NP TP++
Sbjct: 64 DVHLMVTNPDEFVEALVEAGANSITIHSEVATHLYKSIHYLKSFGIKAGVALNPATPISC 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
LE V +D +L+M+V PGFGGQ I ++ KIR+ + + +++VDGG+ NI
Sbjct: 124 LEHVYSLLDRVLVMSVEPGFGGQTFIPFSLEKIRKLNDIKSENNYGFTVQVDGGINLDNI 183
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
+ ++++GA +V+GSS F +
Sbjct: 184 EDVIKSGARDIVIGSSLFREN 204
>gi|83273918|ref|XP_729609.1| D-ribulose-5-phosphate 3-epimerase [Plasmodium yoelii yoelii str.
17XNL]
gi|23487897|gb|EAA21174.1| putative D-ribulose-5-phosphate 3-epimerase [Plasmodium yoelii
yoelii]
Length = 227
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 127/223 (56%), Gaps = 14/223 (6%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ ++ +
Sbjct: 5 EAIIAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKFTNN 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSL---RTIHAMGKKTGVAIN 118
FD HLM+ + + +++++ + +TFH E+ + I + + + I + G+++
Sbjct: 65 IFFDVHLMVENPEKYVSLLK--TSNQLTFHFEALNEDIEKCIELAKIIKSNNMWCGISLK 122
Query: 119 PETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
P+T V L +ID ID +L+MTV PGFGGQ + + K+ + ++++++VDG
Sbjct: 123 PKTSVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ + GA+++V G+S FN + +N ++KS
Sbjct: 181 GLNIETTEISASHGANIIVAGTSIFNAEDPKFV---INTMRKS 220
>gi|238852572|ref|ZP_04642982.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 202-4]
gi|238834718|gb|EEQ26945.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 202-4]
Length = 216
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 119/213 (55%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL AD L +I ++G ++ H D+MDG FVPN+S+G ++++ +
Sbjct: 1 MIAPSILNADNMHLSRDIKAAIESGIERFHIDIMDGHFVPNLSYGPELVKDFKRSFPFTK 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++D+ + + +AG DI+ FH E++ L + + G+AINP TPV
Sbjct: 61 AEIHLMSNNLDTTLPLFVEAGADILEFHYEATNKPDYWLDYLKDHNVRCGMAINPSTPVN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ +++++D +L+MTV PGFGGQ+ E+ + ++ + + +I ++ +EVDGG+
Sbjct: 121 KLKPLLNKLDQVLLMTVKPGFGGQKFEEAAVERLAELQDMIKDENLDLPIEVDGGIDRET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA + V GS F +L
Sbjct: 181 LKLTRDAGAKIFVAGSYIFKNGSIEDQVIKLKK 213
>gi|256827126|ref|YP_003151085.1| ribulose-phosphate 3-epimerase [Cryptobacterium curtum DSM 15641]
gi|256583269|gb|ACU94403.1| ribulose-phosphate 3-epimerase [Cryptobacterium curtum DSM 15641]
Length = 230
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 72/225 (32%), Positives = 117/225 (52%), Gaps = 5/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL+ADF L +EI +I +AGA +H DVMDG FVPN++ G ++ +
Sbjct: 1 MFEAARISPSILSADFMHLADEIDDIERAGADLVHIDVMDGHFVPNLTIGVPLLNQIARS 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR---TIHAMGKKTGVAI 117
+ D HLMI + + A D +T H E+ +L I + G G+A+
Sbjct: 61 AHIPLDVHLMIDNPLVQLPWYLAASPDYVTIHWEALGGRTEALEASALIRSAGVHAGIAL 120
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVD 175
P+TP ++LE + D DM+L+M+V PGF GQ + ++I ++ Q + ++VD
Sbjct: 121 RPDTPTSVLEGIYDAWDMVLVMSVQPGFSGQAFMPASIDRVEQVVRAARQEGACPRIQVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG+++ + GAD+LV G++ F + +A
Sbjct: 181 GGISAETAALVGAVGADVLVAGNAVFKAADRAQAIDSIRGAANNA 225
>gi|157875019|ref|XP_001685917.1| ribulose-5-phosphate 3-epimerase [Leishmania major strain Friedlin]
gi|68128990|emb|CAJ06401.1| putative ribulose-5-phosphate 3-epimerase [Leishmania major strain
Friedlin]
Length = 262
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)
Query: 4 SIQIVPSILAADFSRLGEEISNITK---AGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
I PSILAADF +LG+E++++ + IH DVMDG VPNIS G V+ SLR
Sbjct: 27 EAIIDPSILAADFCKLGDEVASVVSPAGGAVEWIHVDVMDGHMVPNISIGPGVVSSLRAR 86
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ + D H M+S + IA AG TFH E++ + I A G + GVA+ P
Sbjct: 87 FPNVFLDVHCMVSDPKQWVPSIAKAGGSGYTFHIEATNDSKGVAEHIRAHGMQVGVAVKP 146
Query: 120 ETPV-AILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
T + L D+I+ +D +L+MTV PGFGGQ I+ + I + + +++ VDG
Sbjct: 147 ATNLTQELRDLIEGHYVDQVLVMTVEPGFGGQSFIQERLSFISELRR--NYPHLNIGVDG 204
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ AGA++L+ G+S F + + L KS
Sbjct: 205 GIGPSTAVQAADAGANILIAGTSVFRAGDRKAAIEELRASAKS 247
>gi|282850871|ref|ZP_06260245.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 224-1]
gi|282557823|gb|EFB63411.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 224-1]
Length = 216
Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 118/213 (55%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL AD L +I ++G ++ H D+MDG FVPN+S+G ++++ +
Sbjct: 1 MIAPSILNADNMHLSRDIKAAIESGIERFHIDIMDGHFVPNLSYGPELVKDFKRSFPFTK 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++D+ + + +AG DI+ FH E++ L + + G+AINP TPV
Sbjct: 61 AEIHLMSNNLDTTLPLFVEAGADILEFHYEATNKPDYWLDYLKDHNVRCGMAINPSTPVN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ ++++D +L+MTV PGFGGQ+ E+ + ++ + + +I ++ +EVDGG+
Sbjct: 121 KLKPFLNKLDQVLLMTVKPGFGGQKFEEAAVERLAELQDMIKDENLDLPIEVDGGIDRET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA + V GS F +L
Sbjct: 181 LKLTRDAGAKIFVAGSYIFKNGSIEDQVIKLKK 213
>gi|171911153|ref|ZP_02926623.1| ribulose-phosphate 3-epimerase [Verrucomicrobium spinosum DSM 4136]
Length = 224
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 115/214 (53%), Gaps = 5/214 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PS+LAADFS + E+ AGA+ +H DVMDG FV NISFG +I +++ ++D D
Sbjct: 8 ILPSLLAADFSNVAAEVKRAEDAGAQWLHLDVMDGNFVDNISFGPAMIEAVKRHTDMFLD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPETPVA 124
HLMI D ++ AG I+ H E+ + +L+ I + G G+ +NP TP
Sbjct: 68 VHLMIQRADHFLDRFIKAGAGNISVHVEARYDTSLLSTLQRIKSAGLSAGLVLNPSTPFE 127
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIE-STIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ ID++LIMTV PGFGGQ +E T+PK+ A+ + L+VDGG+
Sbjct: 128 AAIPYLHLIDLLLIMTVVPGFGGQPFMEKETMPKLAAARDYREAHGLKYHLQVDGGIYVT 187
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
Q GA+L V G+S F + L +
Sbjct: 188 TAPIARQHGANLFVAGTSSFGPPDMKASMAALAE 221
>gi|217033855|ref|ZP_03439280.1| hypothetical protein HP9810_877g59 [Helicobacter pylori 98-10]
gi|216943753|gb|EEC23196.1| hypothetical protein HP9810_877g59 [Helicobacter pylori 98-10]
Length = 205
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 4/204 (1%)
Query: 17 SRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDS 76
L +EI ++ + A +H DVMDG +VPN++ G V+ + S D HLM+ +
Sbjct: 1 MHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLEKVTKMSKVPLDVHLMVENASF 58
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
+ + A II+ H E+ H R L+ I G G+ +NP T L+ +++ + ++
Sbjct: 59 FVGLFAPLNPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHTHEESLKYLLESVGLV 118
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLL 194
L+M+VNPGFGGQ+ ++ + K + K LI + LEVDGGV +NI L QAG D++
Sbjct: 119 LLMSVNPGFGGQKFLDLVLEKCLKVKELIKHYNPSCLLEVDGGVNDKNIFELQQAGVDVV 178
Query: 195 VVGSSFFNQKGEISYAKRLNDLKK 218
V GS F K + L ++++
Sbjct: 179 VSGSYIFKSKDRKLAIEGLQNVRQ 202
>gi|197248486|ref|YP_002149238.1| allulose-6-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212189|gb|ACH49586.1| D-allulose-6-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
Length = 226
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 75/225 (33%), Positives = 124/225 (55%), Gaps = 7/225 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S I PS++ D RL E++S + H D+MDG +VPN++ + ++
Sbjct: 1 MMKSPLIAPSLMCMDLLRLEEQVSFLND-KIGYFHVDIMDGHYVPNLTLSPFFVSQMKRV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINP 119
+ + DCHLM+++ +I+ +ADAG +++FH E ++ R + I + G K G+ +NP
Sbjct: 60 ASAPIDCHLMVTNPQDYISTLADAGASMVSFHAETANGQAFRLIDNIRSAGMKCGLVVNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
ET + I+ +D +D + IMTV+PGF GQ I + + KI + + +EVDG
Sbjct: 120 ETQLDIVTLYLDRVDKVTIMTVDPGFAGQAFISAMLKKIAAFAEYRQQHQLEFLIEVDGS 179
Query: 178 VTSRNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL--NDLKKS 219
+LV+AGAD+L+VGSS F +I A ++ DL ++
Sbjct: 180 CNKNTYSALVEAGADVLIVGSSGLFGHSEDIGEAWQIMQRDLAEA 224
>gi|154344014|ref|XP_001567951.1| ribulose-5-phosphate 3-epimerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065285|emb|CAM40713.1| putative ribulose-5-phosphate 3-epimerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 255
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 9/226 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITK---AGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
I PSILAADF +LG+E++++ + IH DVMDG VPNIS G V+ SLR
Sbjct: 27 EAIIDPSILAADFCQLGDEVASVISPAGGAVEWIHVDVMDGHMVPNISIGPGVVSSLRAR 86
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ + FD H M+S + +IA AG TFH E++ + + I A G + GVA+ P
Sbjct: 87 FPNVFFDVHCMVSDPKQWVPVIAKAGGSGYTFHIEATDDSKGLAKLIRAHGMQVGVAVKP 146
Query: 120 ETPV-AILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
T + L+++I+ +D +L+MTV PGFGGQ + + I + + +++ VDG
Sbjct: 147 ATNLTQELKELIEGCYVDQVLVMTVEPGFGGQSFMAERLCFIAELRH--NYPHLNIGVDG 204
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
G+ + AGA++L+ G+S F + + L KS ++
Sbjct: 205 GIGPGTAEQAADAGANILIAGTSVFKASDRKAAIEELRASAKSGIS 250
>gi|255072933|ref|XP_002500141.1| sugar kinase and ribulose phosphate 3 epimerase, fused [Micromonas
sp. RCC299]
gi|226515403|gb|ACO61399.1| sugar kinase and ribulose phosphate 3 epimerase, fused [Micromonas
sp. RCC299]
Length = 756
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 118/225 (52%), Gaps = 13/225 (5%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
P + PS+L+AD L ++S + GA +H D+MDG FVPN++ G V+ LRS +
Sbjct: 524 PRATVCPSLLSADQGNLAGDVSRMIAEGADWLHVDIMDGHFVPNLTIGPPVVAHLRSQAP 583
Query: 63 -SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT---IHAMGKKTGVAIN 118
+ DCHL ++ D+ I+ +A +TFH E I ++G + VA+
Sbjct: 584 EAFLDCHLSCTNPDALIDGLAVVKASSVTFHFEVMEDAAACAHLAGRIRSLGMRAAVALK 643
Query: 119 PETPVAILEDVIDE----IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
P TP+ + ++D +DM+L ++V PGFGGQ+ K+R + + +++
Sbjct: 644 PGTPIESVYPLVDASPPAVDMVLCLSVEPGFGGQKFNPEVCAKVRTLRRRC--PDLDIQM 701
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
DGGV + + + AGA++LV GS+ F + + DL+++
Sbjct: 702 DGGVNTDTVGAAAAAGANVLVAGSAVFGSPEPS---RVIADLRRA 743
>gi|68006356|ref|XP_670336.1| D-ribulose-5-phosphate 3-epimerase [Plasmodium berghei strain ANKA]
gi|56485495|emb|CAI02797.1| D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium berghei]
Length = 227
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 127/223 (56%), Gaps = 14/223 (6%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ ++ +
Sbjct: 5 EAIIAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKFTNN 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSL---RTIHAMGKKTGVAIN 118
FD HLM+ + + +++++ + +TFH E+ + I + + + I + G+++
Sbjct: 65 IFFDIHLMVENPEKYVSLLK--TSNQLTFHFEALNEDIEKCIELAKIIKSNNMWCGISLK 122
Query: 119 PETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
P+T V L +ID ID +L+MTV PGFGGQ + + K+ + ++++++VDG
Sbjct: 123 PKTSVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ + GA+++V G+S FN + +N ++KS
Sbjct: 181 GLNIETTEISASHGANIIVAGTSIFNAEDPKFV---INTMRKS 220
>gi|58384702|gb|AAW72717.1| ribulose-phosphate 3-epimerase [Buchnera aphidicola (Cinara cedri)]
Length = 220
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 87/218 (39%), Positives = 135/218 (61%), Gaps = 3/218 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I+PSIL+ADF LG E+ + +AG + IHFD+MD +VPN + G +++S+++ +
Sbjct: 1 MKKFLIIPSILSADFCYLGNELHKLLRAGCQLIHFDLMDNHYVPNFTIGPMILKSVKNNN 60
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
FD LM SS DS I + AD I+ HPE++ R++ I +G G+A+NP
Sbjct: 61 IPVFFDVPLMASSGDSLIPLFADLNVKFISIHPETTNPFPRTIPLIKKIGCNVGLALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGV 178
T + L+ +I+E+D+IL+M VNPGFGGQ ++++ KI+ + LI K+ +I L VDGGV
Sbjct: 121 TSLNCLDYIINELDLILVMAVNPGFGGQVFLKNSFKKIKPIRYLINKKKSNILLSVDGGV 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
NI ++ +GAD LV+GS+ FN K + K ++
Sbjct: 181 NQSNILKIIDSGADYLVIGSAIFNFKNYLKTIKNFQNI 218
>gi|317121763|ref|YP_004101766.1| ribulose-5-phosphate 3-epimerase [Thermaerobacter marianensis DSM
12885]
gi|315591743|gb|ADU51039.1| ribulose-5-phosphate 3-epimerase [Thermaerobacter marianensis DSM
12885]
Length = 285
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 139/218 (63%), Gaps = 4/218 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
++PS+L+ADF+RL E++ +AGA +H DVMDG FVPN++FG +I ++R + D
Sbjct: 64 VLPSLLSADFTRLAEQVKAAEEAGAAGLHLDVMDGRFVPNLTFGPLIIAAVRRLTALPLD 123
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + + +A AG D+IT H E++PH+ R+++ I A+G + GVA+NP TP A +
Sbjct: 124 VHLMVERPEGLLAAVAQAGADLITVHVEATPHVHRAVQMIRALGCRAGVALNPGTPAAAV 183
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E ++ E+D+IL+M+VNPGF GQ + + K+R +A++ LEVDGG+ +
Sbjct: 184 EPLLGEVDLILVMSVNPGFAGQAFLPLALDKLRTLRAMLPAAGPRPWLEVDGGIDPKTAP 243
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
AGADLLV GSS FN + + L+ L+++ A
Sbjct: 244 LAAAAGADLLVAGSSVFNDRAPVRT--NLHHLRQALTA 279
>gi|160932060|ref|ZP_02079451.1| hypothetical protein CLOLEP_00894 [Clostridium leptum DSM 753]
gi|156868662|gb|EDO62034.1| hypothetical protein CLOLEP_00894 [Clostridium leptum DSM 753]
Length = 248
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 1/211 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ ADF L E+ + KAG H DVMDG FVPN G I+ + D
Sbjct: 37 LCPSMMCADFGALKREMEALEKAGIDLYHLDVMDGKFVPNFGMGLQDIQYICGQGKKPAD 96
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI +++ + A G II HPE+ H R+L+ I G K G+AINP T + +
Sbjct: 97 VHLMIEDPGNYVELFAGLGAKIIYIHPEADTHPTRTLQRIIDAGAKPGIAINPGTSIGTV 156
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
E+++ + +L+MTVNPGF GQ+ ++ T KI + A K + VDG ++ I SL
Sbjct: 157 EELLYLSEYVLVMTVNPGFAGQKYLDFTDYKIEKLSAFKEKYGFEMVVDGAISPERIASL 216
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ G V+G+S KG SY + + +L+
Sbjct: 217 SRKGVKGFVLGTSSLFGKGR-SYEEIIPELR 246
>gi|125623796|ref|YP_001032279.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
MG1363]
gi|124492604|emb|CAL97549.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
MG1363]
gi|300070566|gb|ADJ59966.1| ribulose-phosphate 3-epimerase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 216
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + + PS++ A+F+ L ++ ++ AG H D+MDG FVPN G +RS
Sbjct: 1 MSKKL-LCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLM+ + +++ + +D G DII HPE+ H R+L I A GKK G+AINP
Sbjct: 60 TDKPLDVHLMVQNPSNYVEMFSDLGADIIYIHPEADIHPARTLDKIRAKGKKAGIAINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + + +++ +D +IMTVNPGF GQ+ +E KI +A +L + + VDG ++
Sbjct: 120 TSIEAVIELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKAVSLSKQFDFKVMVDGAISP 179
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK 217
+ I+ L + G + ++G S+ F + +Y +N+L+
Sbjct: 180 QKIEELSKLGVEGFILGTSALFGKH--KNYETIINELR 215
>gi|116629423|ref|YP_814595.1| Pentose-5-phosphate-3-epimerase [Lactobacillus gasseri ATCC 33323]
gi|311110928|ref|ZP_07712325.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri MV-22]
gi|116095005|gb|ABJ60157.1| ribulose-5-phosphate 3-epimerase [Lactobacillus gasseri ATCC 33323]
gi|311066082|gb|EFQ46422.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri MV-22]
Length = 216
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 69/213 (32%), Positives = 118/213 (55%), Gaps = 3/213 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV- 64
I PSIL AD L +I ++G ++ H D+MDG FVPN+S+G ++++ +
Sbjct: 1 MIAPSILNADNMHLSRDIKAAIESGIERFHIDIMDGHFVPNLSYGPELVKDFKRSFPFTK 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++D+ + + +AG DI+ FH E++ L + + G+AINP TPV
Sbjct: 61 AEIHLMSNNLDTTLPLFVEAGADILEFHYEATNKPDYWLDYLKDHNVRCGMAINPSTPVN 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
L+ ++++D +L+MTV PGFGGQ+ E+ + ++ + + +I ++ +EVDGG+
Sbjct: 121 KLKPFLNKLDQVLLMTVKPGFGGQKFEEAAVERLAELQDMIKDENLDLPIEVDGGLDRET 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K AGA + V GS F +L
Sbjct: 181 LKLTRDAGAKIFVAGSYIFKNGSIEDQVIKLKK 213
>gi|325684570|gb|EGD26731.1| ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 216
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 119/217 (54%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
+ I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 1 MIIAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM +++ + AG D+I H E+ I L + G G+ ++P+T
Sbjct: 61 TAEVHLMSNNLPDLLPAFVKAGSDLIEIHYEADYPNRIDHWLDYLKENGVSCGLVLSPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +LE D++D +L+MTV PGFGGQ+ +E +I+ A+A++ + +EVDGG+ ++
Sbjct: 121 DIKVLERYKDKLDQVLLMTVYPGFGGQKFMEEAADRIKAARAIL--PDLPIEVDGGINAQ 178
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGAD+ V GS F + L + +
Sbjct: 179 TAEITKEAGADVFVAGSYIFGRDSVAKQVAELTSILE 215
>gi|269121642|ref|YP_003309819.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268615520|gb|ACZ09888.1| Ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 226
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS++ D + E++ + + A H D+MDG FV NI+ + +L+ S
Sbjct: 1 MKKMMFSPSLMCMDLLSMKEQVEILNE-RADFYHVDIMDGHFVKNITLSPFFVSNLKRIS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM D +I +A +G D I H E+ + R + I G K G+ +NP
Sbjct: 60 KLPIDVHLMTEYPDDYIEELAKSGADYICPHAETINKDAFRIINKIKGFGCKAGIVLNPA 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ ++ I +D I +MTV+PGF GQ I + KI++ K L K + +EVDG
Sbjct: 120 TPIEWIKYYIHLLDKITVMTVDPGFAGQPFIPEMLDKIKELKELKEKNGYNYLIEVDGSC 179
Query: 179 TSRNIKSLVQAGADLLVVGSS-FFNQKGEISYAK-RLNDLKKSALA 222
R L +AGA++L+VGSS FN ++ A ++ ++ ++ A
Sbjct: 180 NERTFDILTEAGAEVLIVGSSGLFNLDSDLPKAWDKMMEIYEAKTA 225
>gi|48477917|ref|YP_023623.1| ribulose-phosphate 3-epimerase [Picrophilus torridus DSM 9790]
gi|48430565|gb|AAT43430.1| ribulose-phosphate 3-epimerase [Picrophilus torridus DSM 9790]
Length = 214
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSI+++D S L +EI AGA H DVMDG FV NI+ G D+I+++R +
Sbjct: 2 VEVSPSIISSDLSHLYDEIKRCEDAGAGSFHLDVMDGHFVNNITMGPDLIKAIRKSTGLR 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI D + DAG D++ H ES + L+ H + G+ INPET
Sbjct: 62 LDAHLMIERPDKYYKSFLDAGADVLLIHYESPVNTMELLKKFHRENIRYGIVINPETNFE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ +I+ +++LIM+VNPGF GQ+ I+ ++ K+ QAK I ++ +E+DGG+
Sbjct: 122 RVKPLIENAEILLIMSVNPGFSGQKFIDDSLIKVSQAKEFIRANNLKTRIEIDGGINDET 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ AGAD+LV S F G I+ K L +
Sbjct: 182 GRLAANAGADILVSASFIFK-NGVINPIKTLKNF 214
>gi|313123241|ref|YP_004033500.1| ribulose-5-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279804|gb|ADQ60523.1| Ribulose-5-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 216
Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 119/217 (54%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
+ I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 1 MIIAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM +++ + AG D+I H E+ I L + G G+ ++P+T
Sbjct: 61 TAEVHLMSNNLPDLLPAFVKAGSDLIEIHYEADYPNRIDHWLDYLKENGVSCGLVLSPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +LE D++D +L+MTV PGFGGQ+ +E +I+ A+A++ + +EVDGG+ ++
Sbjct: 121 DIKVLERYKDKLDQVLLMTVYPGFGGQKFMEEAADRIKGARAIL--PDLPIEVDGGINAQ 178
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGAD+ V GS F + L + +
Sbjct: 179 TAEIAKEAGADVFVAGSYIFGRDSVAKQVAELTSILE 215
>gi|16801871|ref|NP_472139.1| hypothetical protein lin2810 [Listeria innocua Clip11262]
gi|16415346|emb|CAC98036.1| lin2810 [Listeria innocua Clip11262]
Length = 224
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGIYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ A A + I+FH E + + ++ I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMYATAKPEYISFHVEVAEDVSEVIQKIRSYNIKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +DE++M+L+MTVNPGF GQ+ +PK+ KA + + +EVDG + +
Sbjct: 123 IYPYLDEVEMVLMMTVNPGFAGQKFQTDVLPKLHDLKAKLEGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|68074167|ref|XP_678998.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499633|emb|CAI04211.1| hypothetical protein PB000125.01.0 [Plasmodium berghei]
Length = 226
Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 72/223 (32%), Positives = 128/223 (57%), Gaps = 15/223 (6%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-D 62
I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ ++ +
Sbjct: 5 EAIIAPSVLASNISKLAEETKRMEDLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKFTNN 64
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSL---RTIHAMGKKTGVAIN 118
FD HLM+ + + +++++ + +TFH E+ + I + + + I + G+++
Sbjct: 65 IFFDIHLMVENPEKYVSLLK--TSNQLTFHFEALNEDIEKCIELAKIIKSNNMWCGISLK 122
Query: 119 PETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
P+T V L +ID ID +L+MTV PGFGGQ + + K+ + ++++++VDG
Sbjct: 123 PKTSVEKLVPIIDTNLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ + +GA+++V G+S FN + +N ++KS
Sbjct: 181 GLNIET-TEISASGANIIVAGTSIFNAEDPKFV---INTMRKS 219
>gi|124805999|ref|XP_001350598.1| D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium falciparum
3D7]
gi|58176834|pdb|1TQX|A Chain A, Crystal Structure Of Pfal009167 A Putative D-Ribulose 5-
Phosphate 3-Epimerase From P.Falciparum
gi|58176835|pdb|1TQX|B Chain B, Crystal Structure Of Pfal009167 A Putative D-Ribulose 5-
Phosphate 3-Epimerase From P.Falciparum
gi|23496723|gb|AAN36278.1|AE014847_5 D-ribulose-5-phosphate 3-epimerase, putative [Plasmodium falciparum
3D7]
Length = 227
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 118/220 (53%), Gaps = 11/220 (5%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T I PS+LA++ S+L EE + GA+ IH DVMD FVPN+SFG VI +L+ Y+
Sbjct: 3 TLKAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYT 62
Query: 62 D-SVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRT---IHAMGKKTGVA 116
FD HLM+ + ++ ++ + +TFH E+ + R ++ I G++
Sbjct: 63 KSIFFDVHLMVEYPEKYVPLLK--TSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGIS 120
Query: 117 INPETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
I P+T V L ++D I+ +L+MTV PGFGGQ + + K+ + ++++++V
Sbjct: 121 IKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRK--KYKNLNIQV 178
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
DGG+ + GA+++V G+S FN + +
Sbjct: 179 DGGLNIETTEISASHGANIIVAGTSIFNAEDPKYVIDTMR 218
>gi|331243054|ref|XP_003334171.1| ribulose-phosphate 3-epimerase [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309313161|gb|EFP89752.1| ribulose-phosphate 3-epimerase [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 235
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 78/231 (33%), Positives = 129/231 (55%), Gaps = 17/231 (7%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD- 62
I PS+LA+DF L E + K GA+ +H DVMDG FVPNI+ GA V+ S+ +
Sbjct: 3 KAIIAPSVLASDFGSLTAECKKVIKDGAEWLHMDVMDGHFVPNITIGAPVLASVAKTVEG 62
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESS--------PHIRRSLRTIHAMGKKTG 114
+ DCH+M++ I+ +A AG TFH E+ + IHA G + G
Sbjct: 63 AYMDCHMMVADPMRWIDDVAGAGGASYTFHLEACFQKPDSADHDPLAIIDRIHASGMRAG 122
Query: 115 VAINPETPVAILED-VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
VAI+P+TP + D + + D++L+MTV+PG GGQ+ I++ + K+ + +A ++ ++
Sbjct: 123 VAISPDTPSEKITDSIAAKADLLLVMTVHPGRGGQKFIDACVVKVAELRARFPQK--DIQ 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN-----DLKKS 219
VDGGV + +K +AG++++V G++ F + L +L+K+
Sbjct: 181 VDGGVGPKTVKPCAEAGSNVVVAGTAVFGAPQPGVVIQELKHAIETELRKA 231
>gi|320105032|ref|YP_004180623.1| Ribulose-phosphate 3-epimerase [Isosphaera pallida ATCC 43644]
gi|319752314|gb|ADV64074.1| Ribulose-phosphate 3-epimerase [Isosphaera pallida ATCC 43644]
Length = 255
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 4/207 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PS+LA DF R+ + + I + G + +H DVMDG FVPN+++G VI R + VFD
Sbjct: 26 ITPSLLACDFGRMRDVLDRIARIGVQAVHLDVMDGRFVPNLTYGPPVIARWREATHLVFD 85
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET--PVA 124
HLMI + I+ ADAGCD + H E+ L I A G + G+A+NP T +
Sbjct: 86 AHLMIVEPERWIDPFADAGCDTLVVHLEAVEQPWPVLERIKARGLRAGIAVNPPTLLRLD 145
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ + +D L+M+V PGFGGQ S + K+ K + + + +DGG+ +
Sbjct: 146 PVPSWLALLDSALVMSVMPGFGGQVFDPSVLSKVAALKQ--ARPGLRVAIDGGIGPDTLA 203
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAK 211
+ V G D LV+GS+FF ++ A
Sbjct: 204 AAVATGVDQLVIGSAFFRADDQLEVAW 230
>gi|227206446|dbj|BAH57278.1| AT5G61410 [Arabidopsis thaliana]
Length = 190
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 118/190 (62%), Gaps = 5/190 (2%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SS 96
MDG FVPNI+ G V+ +LR +D D HLMI + + AG DI++ H E S+
Sbjct: 1 MDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQQST 60
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
H+ R++ I ++G K GV +NP TP++ +E V+D +D++LIM+VNPGFGGQ IES +
Sbjct: 61 IHLHRTVNQIKSLGAKAGVVLNPGTPLSAIEYVLDMVDLVLIMSVNPGFGGQSFIESQVK 120
Query: 157 KIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
KI + + ++ ++ +EVDGGVT N +++AGA+ LV GS+ F K K +
Sbjct: 121 KISDLRKMCAEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIK 180
Query: 215 DLKK-SALAI 223
K+ +A+A+
Sbjct: 181 ASKRPAAVAV 190
>gi|160940188|ref|ZP_02087533.1| hypothetical protein CLOBOL_05077 [Clostridium bolteae ATCC
BAA-613]
gi|158436768|gb|EDP14535.1| hypothetical protein CLOBOL_05077 [Clostridium bolteae ATCC
BAA-613]
Length = 214
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 86/204 (42%), Positives = 125/204 (61%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI+PSI AD RL +EI + + +H D+MDG FV NI+FG + I +++ S +F
Sbjct: 3 QILPSIFGADILRLKDEIEFLERENTAILHVDMMDGNFVSNIAFGPNQIGAMKKASKMMF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+MI H++ + G ++I+ H ES+PHI ++ I G+K GV +NP TP ++
Sbjct: 63 DVHMMIDHPKDHLDDVIATGAEMISVHYESTPHIHNMIQRIKKAGRKAGVVLNPGTPESV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
LE ++D+ID +LIMT+NPG GQ IE ++ KI K +IG R I +EVDGGV K
Sbjct: 123 LEYLLDDIDYVLIMTINPGTPGQTFIEKSLEKIANLKKMIGSRPIQIEVDGGVNDVIAKQ 182
Query: 186 LVQAGADLLVVGSSFFNQKGEISY 209
+ AGA+L+VVG F + Y
Sbjct: 183 VAGAGAELIVVGGYLFGGNPDERY 206
>gi|32491329|ref|NP_871583.1| hypothetical protein WGLp580 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166536|dbj|BAC24726.1| rpe [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 233
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 126/225 (56%), Gaps = 5/225 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PSILAA+F+ LGEEI + AGA IHFD MD +VPN+S G V++S+R
Sbjct: 1 MNNNFFISPSILAANFANLGEEIRKVIDAGADIIHFDAMDNHYVPNLSIGPIVLKSIRKD 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ HLM ID + + I FHPES+ ++ L+ I K G+A
Sbjct: 61 GIIIPIEVHLMAKPIDELVVSFIKTKANCIIFHPESTKNVNFLLKLIRKNNCKAGLAFTL 120
Query: 120 ETPVAIL--EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVD 175
T + L ++++ +D++LIM+V+PGF GQ+ +S I +++ A+ LI +I + +D
Sbjct: 121 TTSLNYLKNKNIVKNLDIVLIMSVSPGFSGQKFQKSAIKRLKIARKLIDDSGYNILIGID 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GGV NI + AGAD+ V+GSS F++ K + KSA
Sbjct: 181 GGVNDDNIYDVAYAGADIFVIGSSIFSKNNYFKTIKNMKKKIKSA 225
>gi|315302009|ref|ZP_07872992.1| ribulose-phosphate 3-epimerase, ic [Listeria ivanovii FSL F6-596]
gi|313629618|gb|EFR97768.1| ribulose-phosphate 3-epimerase, ic [Listeria ivanovii FSL F6-596]
Length = 223
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS++ ADF+ L +E+ + +AG+ H D+MDG FVPN G ++R + +
Sbjct: 4 ILICPSMMCADFANLKQEVEVLDQAGSDIFHIDIMDGKFVPNFGMGLQDFEAIRKLTKKL 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + ++ AD G DII HP H R+L I GKK G+AINP T +A
Sbjct: 64 VDVHLMIMNPGDYVETFADMGADIIYIHPXXDIHPARTLDKIKQKGKKAGIAINPGTSIA 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+++++ +D +++MTVNPGF GQ ++ KI + S + VDG + + I
Sbjct: 124 TVKELLPLVDYVMVMTVNPGFAGQAYLDYVDQKISELLTAKSNYSFEIMVDGAIAPKKIA 183
Query: 185 SLVQAGADLLVVGSS-FFNQKGEISYAKRLNDLKKSAL 221
L + G V+G+S F + G SY + + LK L
Sbjct: 184 KLSKMGVKGFVLGTSTLFGKAG--SYQEIIQKLKSEKL 219
>gi|217032956|ref|ZP_03438430.1| hypothetical protein HPB128_182g10 [Helicobacter pylori B128]
gi|216945325|gb|EEC23999.1| hypothetical protein HPB128_182g10 [Helicobacter pylori B128]
Length = 205
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 4/204 (1%)
Query: 17 SRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDS 76
L +EI ++ + A +H DVMDG +VPN++ G V+ + S D HLM+ +
Sbjct: 1 MHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLEKVTQMSQVPLDVHLMVENASF 58
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
+ + A II+ H E+ H R L+ I G G+ +NP T ++ +++ + ++
Sbjct: 59 FVGLFAPLKPQIISIHAENEKHPHRVLQLIRNSGITPGIVLNPHTHEESIKYLLESVGLV 118
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLL 194
L+M+VNPGFGGQ+ ++ + K + K LI + LEVDGGV +NI L QAG D++
Sbjct: 119 LLMSVNPGFGGQKFLDLVLEKCLKVKELIRHYNPSCLLEVDGGVNDKNIFELQQAGVDVV 178
Query: 195 VVGSSFFNQKGEISYAKRLNDLKK 218
V GS F K + L + ++
Sbjct: 179 VSGSYIFKSKDRKLAIEGLQNARQ 202
>gi|126640767|ref|YP_001083751.1| D-ribulose-5-phosphate 3-epimerase [Acinetobacter baumannii ATCC
17978]
Length = 190
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 3/189 (1%)
Query: 39 MDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
MD +VPN++FGA V ++L++Y + D HLM+S +D I +AG DIITFHPE+S
Sbjct: 1 MDNHYVPNLTFGAGVCKALKNYGITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASH 60
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
HI RSL+ I + G K G+ NP TP+ L+ V+D++D IL+M+VNPGFGGQ+ I T+ K
Sbjct: 61 HIDRSLQLIKSGGAKAGLVFNPATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEK 120
Query: 158 IRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+R+A+ +I R I LEVDGGV NI+ + +AGAD+ V GS+ F Q + ++
Sbjct: 121 LREARKIIDASGRDIRLEVDGGVGPANIREIAEAGADMFVAGSAIFGQPDYKAVIDQMRA 180
Query: 216 LKKSALAID 224
++D
Sbjct: 181 ELAKVGSVD 189
>gi|313622147|gb|EFR92705.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL J1-023]
Length = 226
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 70/211 (33%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 5 KIAASIMCADQLHLGDELQRLESAGVELLHCDVMDGIYVNNLALGPEYLEIVRNNTEIPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ A A + I+FH E + + ++ I + K +AINPETP+
Sbjct: 65 DIHLATITPLKYIDMYATAKPEYISFHVEVAEDVSEVIQKIRSYNIKPSIAINPETPIEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +DE++M+L+MTVNPGF GQ+ +PK+ KA + + +EVDG + +
Sbjct: 125 IYPYLDEVEMVLMMTVNPGFAGQKFQTDVLPKLHDLKAKLEGKVHAPLIEVDGNINKETV 184
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 185 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 215
>gi|307106707|gb|EFN54952.1| hypothetical protein CHLNCDRAFT_134711 [Chlorella variabilis]
Length = 781
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 71/214 (33%), Positives = 114/214 (53%), Gaps = 11/214 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSV 64
+ PSIL+ADFS L +++ + AGA+ +H D+ DG FVPN++ G V++SL +
Sbjct: 551 IVSPSILSADFSSLARDVARVVAAGAEWVHVDIFDGVFVPNLTIGPPVVKSLHKSVPQAF 610
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES------SPHIRRSLRTIHAMGKKTGVAIN 118
DCHL + ++++ +A AGC TFH E+ R +G G+A+
Sbjct: 611 LDCHLCVVHPENYVEDLAAAGCAQFTFHIEAPGIDFCCHTAAALCRRARGLGMLAGIALT 670
Query: 119 PETPVAILEDV--IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
PET + + E+D +L+++V GFGGQ+ +PK+ + I++ VDG
Sbjct: 671 PETAPDAVFPLCAAGEVDTVLLLSVRAGFGGQKFQPGVLPKVAALRRAF--PVINIIVDG 728
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
G+T N S+ +AGA+ LV G++ F K A
Sbjct: 729 GITLDNAGSVARAGANALVAGTTVFAGKEPPEVA 762
>gi|260654220|ref|ZP_05859710.1| ribulose-phosphate 3-epimerase [Jonquetella anthropi E3_33 E1]
gi|260630853|gb|EEX49047.1| ribulose-phosphate 3-epimerase [Jonquetella anthropi E3_33 E1]
Length = 224
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 72/225 (32%), Positives = 127/225 (56%), Gaps = 7/225 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-Y 60
+ PS+L+AD L E + + A +H D+MDG +VPN+++G ++++LR Y
Sbjct: 1 MRKFFLAPSLLSADPLALAESVEKLDGAY-DWLHVDIMDGHYVPNLTYGPSLVKALRKKY 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D+ D HLM+ ++ +++ G +T H ES+ H+ R+L I G GV++NP
Sbjct: 60 PDAWLDVHLMVEPSENFLDMFLPCGASCLTVHQESTRHLHRALTRIRENGIWAGVSLNPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TPV ++E V+D +D++L+M+VNPGFGGQ I S K + ++++ +E+DGG+
Sbjct: 120 TPVCMVEPVLDCLDLVLLMSVNPGFGGQSFIPSVCSKAQTLCQWRAAKNLNFVIEMDGGL 179
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
+ + AG D V+G++ FN A ++++ A+ +
Sbjct: 180 GKDTLVQALTAGVDAAVMGNALFNTPAPAQTA---REMRERAMEV 221
>gi|315038629|ref|YP_004032197.1| ribulose-phosphate 3-epimerase [Lactobacillus amylovorus GRL 1112]
gi|312276762|gb|ADQ59402.1| ribulose-phosphate 3-epimerase [Lactobacillus amylovorus GRL 1112]
Length = 216
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 123/217 (56%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD L ++ + AG + H D+MDG FVPN+SFG +++ +
Sbjct: 1 MLIAPSILNADNLNLENDVKDAIAAGISRFHIDIMDGHFVPNLSFGPQLVQDFKREFPMT 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPET 121
+ HLM + D I DAG D+I H E+ + L + + KT +AINP+T
Sbjct: 61 ESEIHLMSDNPDDLIPAFVDAGADLIELHYEAMSEKKLDYWLDYLISNDVKTSLAINPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P ++ ++D +L+MTV+PGFGGQ+ IE + KI+QA+ ++G I++EVDGGV +
Sbjct: 121 PSDVVAKFASKLDQVLVMTVHPGFGGQKFIEDSAEKIKQAREIVG-NDIAIEVDGGVNDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGA++ VVGS + + ++L ++ K
Sbjct: 180 TIKIAKDAGANVFVVGSYLYKDGDIANQVRKLENVLK 216
>gi|46908840|ref|YP_015229.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47092283|ref|ZP_00230074.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 4b H7858]
gi|226225212|ref|YP_002759319.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes Clip81459]
gi|254852039|ref|ZP_05241387.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|254931070|ref|ZP_05264429.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|254992930|ref|ZP_05275120.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J2-064]
gi|300763582|ref|ZP_07073580.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|46882113|gb|AAT05406.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|47019262|gb|EAL10004.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 4b H7858]
gi|225877674|emb|CAS06388.1| Putative ribulose-5-phosphate 3-epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605336|gb|EEW17944.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|293582614|gb|EFF94646.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|300515859|gb|EFK42908.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|328468144|gb|EGF39150.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes 1816]
gi|328469674|gb|EGF40599.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes 220]
gi|332313091|gb|EGJ26186.1| Ribulose-phosphate 3-epimerase [Listeria monocytogenes str. Scott
A]
Length = 224
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA + + +EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|255024349|ref|ZP_05296335.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J1-208]
Length = 224
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 67/211 (31%), Positives = 117/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + ++ I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIQKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA + +EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLEGKVHVPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|319935399|ref|ZP_08009836.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. 29_1]
gi|319809615|gb|EFW06028.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. 29_1]
Length = 216
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 67/213 (31%), Positives = 117/213 (54%), Gaps = 3/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A F L +E+ ++ +AG H DVMDG FVPN G I + + D
Sbjct: 5 LCPSMMCAQFGNLEKEVKDLEEAGIDIFHLDVMDGNFVPNFGMGLQDIEFIVKQATVPCD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +I+ A+ G II H E+ HI R+L+ I G +G+AINP T +
Sbjct: 65 VHLMVNKASDYISKFAEMGVQIIYVHSENDCHITRTLQMIKDTGICSGLAINPGTSFESI 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++V+ +D +L+M+VNPGF GQ+ + K++Q + + +DG + I++L
Sbjct: 125 KEVLTLVDYVLVMSVNPGFSGQKYLSFVDEKLKQLCEKKKQYGYKVMLDGACSPERIETL 184
Query: 187 VQAGADLLVVG-SSFFNQKGEISYAKRLNDLKK 218
+ G D ++G S+ F ++ +Y + + +L++
Sbjct: 185 SKIGVDGFILGTSALFGKE--KNYQEIIPELRQ 215
>gi|167755419|ref|ZP_02427546.1| hypothetical protein CLORAM_00933 [Clostridium ramosum DSM 1402]
gi|237733649|ref|ZP_04564130.1| ribulose-phosphate 3-epimerase [Mollicutes bacterium D7]
gi|167704358|gb|EDS18937.1| hypothetical protein CLORAM_00933 [Clostridium ramosum DSM 1402]
gi|229383247|gb|EEO33338.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. D7]
Length = 216
Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A+F L EI + ++G H DVMDG FVPN G I + ++ D
Sbjct: 5 LCPSMMCANFGNLENEIRKLEESGIDIFHLDVMDGSFVPNFGMGLQDIEYICKTANKPCD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +++ A G II HPES HI R+L+ I G + G+ +NP T +
Sbjct: 65 VHLMVVNPGAYVKKFAQLGVKIIYVHPESDVHITRTLQMIKDAGAQAGIVVNPGTSYESV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++ + +D +++M+VNPGF GQ+ + K +Q A + + +DG + I L
Sbjct: 125 KETLSLVDYVMVMSVNPGFAGQKYLNFVDDKFKQFCAKKEEFGYKVMIDGACSPERIAML 184
Query: 187 VQAGADLLVVG-SSFFNQKGEISYAKRLNDLK 217
G + ++G S+ F ++ SY + + +L+
Sbjct: 185 SSIGVEGFILGTSALFGKE--KSYQEIIKELR 214
>gi|217966140|ref|YP_002351818.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes HCC23]
gi|217335410|gb|ACK41204.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes HCC23]
gi|307572250|emb|CAR85429.1| ribulose-phosphate 3-epimerase, putative [Listeria monocytogenes
L99]
Length = 224
Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA + + +EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 SLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|227549212|ref|ZP_03979261.1| ribulose-phosphate 3-epimerase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078666|gb|EEI16629.1| ribulose-phosphate 3-epimerase [Corynebacterium lipophiloflavum DSM
44291]
Length = 218
Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 121/218 (55%), Gaps = 4/218 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSILAAD++ LGE++ + + A IH D+MDG FVPN+SFG DV +++ +D
Sbjct: 2 IYIAPSILAADYAALGEDVRKV--SNADLIHVDIMDGHFVPNLSFGPDVTKAVNGVTDKF 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI + DAG D + FH E++ + + H +G + G AI P TP+
Sbjct: 60 LDMHLMIEQPEKWFASYVDAGGDRLVFHVEATSDHVAAAKAAHELGAEAGFAIKPGTPIE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
D ++ ++ ++IM+V PGFGGQ+ + + K+R ++ I + +S + +DGG+ +
Sbjct: 120 PYLDDLEHVEEVMIMSVEPGFGGQKFMPEVLDKVRLLRSRIAEDGLSTIIAIDGGIAAAT 179
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I AG + V GS+ F + L L ++A
Sbjct: 180 IAQAAAAGVESFVAGSAVFGADDPAAAVDELRRLARAA 217
>gi|289435926|ref|YP_003465798.1| ribulose-phosphate 3-epimerase family protein [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289172170|emb|CBH28716.1| ribulose-phosphate 3-epimerase family protein [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 224
Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGDELKRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVADDVTEVIRKIRSYNIKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +++++M+L+MTVNPGF GQ+ + K+R KA + +EVDG + +
Sbjct: 123 IYPYLNDVEMVLMMTVNPGFAGQKFQTDVLQKLRDLKAKLAGKVHVPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SY++RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYSERL 213
>gi|254830906|ref|ZP_05235561.1| hypothetical protein Lmon1_06079 [Listeria monocytogenes 10403S]
Length = 224
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEIIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA + + +EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKIHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|313606414|gb|EFR83308.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes FSL F2-208]
Length = 226
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 5 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 65 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA + + +EVDG + +
Sbjct: 125 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHAPLIEVDGNINKETV 184
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 185 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 215
>gi|303277005|ref|XP_003057796.1| sugar kinase and ribulose phosphate 3 epimerase, fused [Micromonas
pusilla CCMP1545]
gi|226460453|gb|EEH57747.1| sugar kinase and ribulose phosphate 3 epimerase, fused [Micromonas
pusilla CCMP1545]
Length = 759
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 121/231 (52%), Gaps = 18/231 (7%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
TP +I PS+LAAD L E+S + GA +H D+MDG FV N++ G V+ LR+ +
Sbjct: 522 TPVAKIAPSLLAADQGDLAGEVSRMIHDGADWLHVDIMDGHFVNNLTIGPPVVAHLRARA 581
Query: 62 -DSVFDCHLMISSIDSHINIIADAGCDIITFHPE----------SSPHIRRSLRTIHAMG 110
D+ DCHL S+ S I+ +A A +TFH E ++ TI A G
Sbjct: 582 RDAFLDCHLSCSNPGSLIDGLAAARASSVTFHIEAVGGGDGDGDATSEAAALAATIRARG 641
Query: 111 KKTGVAINPETPVAILEDVI--DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
+ VA+ P TP+ + ++ D +DM+L +TV PGFGGQ+ S K+R +
Sbjct: 642 MRAAVALKPSTPIETVFPLVDADAVDMVLCLTVEPGFGGQKFTASVCDKVRA--LRRRRP 699
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ ++VDGG+ + + AGA+++V GS+ F + + L+++
Sbjct: 700 RLDIQVDGGLNEDTVVAAACAGANVVVAGSAVFGSDDP---GRVIRGLRRA 747
>gi|58337590|ref|YP_194175.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus NCFM]
gi|227904230|ref|ZP_04022035.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus ATCC
4796]
gi|58254907|gb|AAV43144.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus NCFM]
gi|227867878|gb|EEJ75299.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus ATCC
4796]
Length = 216
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD L +I AG + H D+MDG FVPN+SFG ++ +
Sbjct: 1 MIIAPSILNADNLNLETDIKEAIAAGINRFHIDIMDGHFVPNLSFGPQLVEDFKREFPMT 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPET 121
+ HLM S D + +AG D+I H E+ + L + + G TG+A+NP+T
Sbjct: 61 DAEIHLMSDSPDDLVPAFVNAGADLIELHYEAMDEDKLDYWLDYLISNGVNTGLALNPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P ++ + +++ +L+MTV PGFGGQ+ I ++ KI++ + L+G I +EVDGG+ ++
Sbjct: 121 PSDVVTKYVSKLNQVLVMTVYPGFGGQEFIANSAQKIKEVRELVG-PDIDIEVDGGINNQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGA++ VVGS + + +L D+ K
Sbjct: 180 TIKIAKDAGANVFVVGSYLYKAGNIANQVHKLEDILK 216
>gi|15835720|ref|NP_300244.1| ribulose-phosphate 3-epimerase [Chlamydophila pneumoniae J138]
gi|8978558|dbj|BAA98395.1| ribulose-P epimerase [Chlamydophila pneumoniae J138]
Length = 229
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 5/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSI+ AD + LG E + +AG+ IH D+MDG FVPN++FG +I ++ +D
Sbjct: 6 SVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDL 65
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
+ H MI + I +G D I H E+S I+ L I G + G+A +P+T +
Sbjct: 66 FLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDIKELLSYIKKCGVQAGLAFSPDTSI 125
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVT 179
L + D++++M+V GF Q + TI KI A+ I + +EVDGG+
Sbjct: 126 EFLPSFLPFCDVVVLMSVYQGFTVQSFLPHTIEKIAFARHAIKTLGLKDSCLIEVDGGID 185
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
++ AGAD+LV S F ++ ++ L+
Sbjct: 186 QQSAPLCRDAGADILVTASYLFEA-DSLAMEDKILLLR 222
>gi|154483828|ref|ZP_02026276.1| hypothetical protein EUBVEN_01532 [Eubacterium ventriosum ATCC
27560]
gi|149735319|gb|EDM51205.1| hypothetical protein EUBVEN_01532 [Eubacterium ventriosum ATCC
27560]
Length = 224
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A++ L +E++++ +AG H D+MDG FVPN G + + S D
Sbjct: 13 LCPSMMCANYRNLEKEVNDLIEAGVDIFHIDIMDGQFVPNFGMGLQDVEYICKASTIPVD 72
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + +++ A G DII HPES H R+L++I +G K G+AINP T V +
Sbjct: 73 AHLMIENPGNYVEKFAKLGIDIIYIHPESDVHPTRTLQSIIDLGVKPGIAINPGTAVETI 132
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ ++ +D +++M+VNPGF GQ+ I S KI Q L K + +DG + +++L
Sbjct: 133 KPLLPFVDYVMVMSVNPGFSGQKYISSVDEKIAQLVELKEKYGYEVMLDGACSPERVETL 192
Query: 187 VQAGADLLVVG-SSFFNQKGEISYAKRLNDLK 217
+ G ++G S+ F ++ SY + + +L+
Sbjct: 193 SKVGVKGFILGTSALFGKE--KSYKEIVKELR 222
>gi|258575273|ref|XP_002541818.1| ribulose-phosphate 3-epimerase [Uncinocarpus reesii 1704]
gi|237902084|gb|EEP76485.1| ribulose-phosphate 3-epimerase [Uncinocarpus reesii 1704]
Length = 236
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 36/240 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSIL+ADF+ LG E SN+ KA + IH D+MDG FVPNI+FGA V+ +RS+
Sbjct: 1 MAPPAIIAPSILSADFANLGAECSNLMKADSDWIHVDIMDGHFVPNITFGAPVVSKIRSH 60
Query: 61 SDSV--------FDCHLMISSIDSHINIIADAGCDIITFHPESS---------------- 96
FDCH+MI+ + +DAGCD+ FH E++
Sbjct: 61 VQKPASMGGKGTFDCHMMIAEPQKWVKDFSDAGCDLYCFHWEAAMTSTAAKEPADKETTR 120
Query: 97 -PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
+ +R IH G + G+A+ P T V +L D+++ + I P + S +
Sbjct: 121 KTSPKELIRYIHETGMQAGIALKPATSVDVLCDILENPEEI----ERPD-----FMASEL 171
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
PK++ + ++++EVDGG+ I AGA+++V GS+ F +L +
Sbjct: 172 PKVQALRKRY--PNMNIEVDGGLGLGTIDQAADAGANVIVAGSAVFGANDPAEVIAKLRE 229
>gi|325957110|ref|YP_004292522.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus 30SC]
gi|325333675|gb|ADZ07583.1| ribulose-phosphate 3-epimerase [Lactobacillus acidophilus 30SC]
gi|327183834|gb|AEA32281.1| ribulose-phosphate 3-epimerase [Lactobacillus amylovorus GRL 1118]
Length = 216
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 123/217 (56%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD L ++ + AG + H D+MDG FVPN+SFG +++ +
Sbjct: 1 MLIAPSILNADNLNLENDVKDAIAAGISRFHIDIMDGHFVPNLSFGPQLVQDFKREFPMT 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPET 121
+ HLM + D I DAG D+I H E+ + L + + KT +AINP+T
Sbjct: 61 ESEIHLMSDNPDDLIPAFVDAGADLIELHYEAMSEKKLDYWLDYLISNDVKTSLAINPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P ++ ++D +L+MTV+PGFGGQ+ IE + KI+QA+ ++G I++EVDGGV +
Sbjct: 121 PSDVVAKFASKLDQVLVMTVHPGFGGQKFIEDSAEKIKQAREIVG-NDIAIEVDGGVNDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGA++ VVGS + + ++L ++ K
Sbjct: 180 TIKIAKDAGANVFVVGSYLYKDGDIANQVRKLENVIK 216
>gi|255026066|ref|ZP_05298052.1| hypothetical protein LmonocytFSL_06385 [Listeria monocytogenes FSL
J2-003]
Length = 209
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 2/205 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + I PS++ ADFS L E+ + KAG+ H D+MDG FVP+ G +R
Sbjct: 1 MSKKL-ICPSMMCADFSGLEREVEELDKAGSDVFHVDIMDGAFVPSFGMGLQDFEEIRQK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ + D HLMI + ++ + AD G DII HPE+ H R+L I GKK G+AINP
Sbjct: 60 TQKLVDVHLMIMNPGDYVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +A +++++ +D +++MTVNPGF GQ+ ++ KI + L + + VDG ++
Sbjct: 120 TAIATIKELLPLVDNVMVMTVNPGFAGQKYLDYVDVKIAELVELKKDYTFEIMVDGAISP 179
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQK 204
I L Q G V+G S+ F +K
Sbjct: 180 EKISKLSQLGVKGFVLGTSALFGKK 204
>gi|169335084|ref|ZP_02862277.1| hypothetical protein ANASTE_01491 [Anaerofustis stercorihominis DSM
17244]
gi|169257822|gb|EDS71788.1| hypothetical protein ANASTE_01491 [Anaerofustis stercorihominis DSM
17244]
Length = 227
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 120/214 (56%), Gaps = 2/214 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ + G+E+ + AG IHFDVMDG FV NI G ++ ++ +SD +F
Sbjct: 3 KIAASIMCGNALEYGDELDALKAAGVDMIHFDVMDGEFVNNIGMGLYMLEGMKKHSDMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ D + IA+AG + I H E+ H+ RS+ I G K GV +NP T + +
Sbjct: 63 DVHLMVVEPDVYYERIAEAGAEYICIHAEAVKHLHRSILRIKKAGAKAGVVLNPSTNLNV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
L++VI EID++ +MTVNPG G++ I++ KI K + K + + +EVDG + I
Sbjct: 123 LKEVIKEIDLVCLMTVNPGGSGEKFIQNQYKKIADLKEMKEKYNPDLLIEVDGNIGPETI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+AGAD+ V G+S + Y ++K
Sbjct: 183 PGCAKAGADVYVCGTSAIFKGDRDLYKPLTKEMK 216
>gi|116874026|ref|YP_850807.1| ribulose-phosphate 3-epimerase family protein [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116742904|emb|CAK22028.1| ribulose-phosphate 3-epimerase family protein [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 224
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 117/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGDELRRLETAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVADDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +DE++M+L+MTVNPGF GQ+ + K+ KA + +EVDG + +
Sbjct: 123 IYPYLDEVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHVPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHNRDQTSYAERL 213
>gi|257212236|emb|CAX82991.1| hypotherical protein [Schistosoma japonicum]
Length = 245
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 7/202 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+ I I PSIL AD S+L N+ +GA +H D+MDG FVPNI+ G V+ SL+ +
Sbjct: 6 SKPILIGPSILNADLSQLAVVCDNLLNSGADYLHLDIMDGHFVPNITIGHPVVASLKKHL 65
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D H+M+S + + + AG TFH ESS + ++ I K G+ I P
Sbjct: 66 PCKAFLDLHMMVSDPEKWVENMKAAGASQYTFHFESSKDVMHCIQKIREADMKVGLGIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+TPV + +D +DM+LIMTV PGFGGQ+ + +PK+R + ++ +EVDGGVT
Sbjct: 126 KTPVTEVLPYVDLVDMVLIMTVEPGFGGQKFMADMLPKVRYLRE--KYTNLDIEVDGGVT 183
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
+NI+ V+ + V+G F
Sbjct: 184 LKNIRDWVEVSL-IFVLG--IF 202
>gi|290891847|ref|ZP_06554844.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|290558441|gb|EFD91958.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
Length = 224
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 69/211 (32%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ I K+ KA + + +EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVIQKLHDLKAKLAGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|16804698|ref|NP_466183.1| hypothetical protein lmo2661 [Listeria monocytogenes EGD-e]
gi|47095465|ref|ZP_00233074.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|224499334|ref|ZP_03667683.1| hypothetical protein LmonF1_06417 [Listeria monocytogenes Finland
1988]
gi|224503693|ref|ZP_03672000.1| hypothetical protein LmonFR_14539 [Listeria monocytogenes FSL
R2-561]
gi|254829110|ref|ZP_05233797.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|254899887|ref|ZP_05259811.1| hypothetical protein LmonJ_08736 [Listeria monocytogenes J0161]
gi|254912907|ref|ZP_05262919.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937288|ref|ZP_05268985.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|255028234|ref|ZP_05300185.1| hypothetical protein LmonL_01424 [Listeria monocytogenes LO28]
gi|284800453|ref|YP_003412318.1| hypothetical protein LM5578_0199 [Listeria monocytogenes 08-5578]
gi|284993639|ref|YP_003415407.1| hypothetical protein LM5923_0199 [Listeria monocytogenes 08-5923]
gi|16412161|emb|CAD00874.1| lmo2661 [Listeria monocytogenes EGD-e]
gi|47016075|gb|EAL06999.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|258601521|gb|EEW14846.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258609895|gb|EEW22503.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|284056015|gb|ADB66956.1| hypothetical protein LM5578_0199 [Listeria monocytogenes 08-5578]
gi|284059106|gb|ADB70045.1| hypothetical protein LM5923_0199 [Listeria monocytogenes 08-5923]
gi|293590908|gb|EFF99242.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 224
Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats.
Identities = 67/211 (31%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGDELQRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEIIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA + + +EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKIHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|313620429|gb|EFR91819.1| ribulose-phosphate 3-epimerase family protein [Listeria innocua FSL
S4-378]
Length = 222
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 67/215 (31%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVKNAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + ++ I +G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRELGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ ++++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLEKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + GAD+ VVG++ SY ++L L++
Sbjct: 183 RLIEPIGADVYVVGTAALFNDKPGSYTEKLAPLRE 217
>gi|257883572|ref|ZP_05663225.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,502]
gi|257891342|ref|ZP_05670995.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,410]
gi|257894730|ref|ZP_05674383.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,408]
gi|260562635|ref|ZP_05833137.1| predicted protein [Enterococcus faecium C68]
gi|261207945|ref|ZP_05922625.1| predicted protein [Enterococcus faecium TC 6]
gi|294618042|ref|ZP_06697643.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1679]
gi|294622595|ref|ZP_06701593.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
gi|314995921|ref|ZP_07861005.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecium
TX0133a01]
gi|257819230|gb|EEV46558.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,502]
gi|257827702|gb|EEV54328.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,410]
gi|257831109|gb|EEV57716.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,408]
gi|260072963|gb|EEW61316.1| predicted protein [Enterococcus faecium C68]
gi|260077815|gb|EEW65526.1| predicted protein [Enterococcus faecium TC 6]
gi|291595713|gb|EFF27005.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1679]
gi|291597927|gb|EFF29051.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
gi|313589885|gb|EFR68730.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecium
TX0133a01]
Length = 220
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 125/217 (57%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PS+L A + + E + + +H DVMDGCFVP+++FG VI+ +R +D V
Sbjct: 1 MTIAPSLLNAPIAEVKELFEILKEKNVDYLHIDVMDGCFVPDMAFGPSVIKDIRPLTDVV 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI + + + +AG DI+TFH E++ H + ++ + G K G+ NP TPV+
Sbjct: 61 FDVHLMIDTPEKIVTRFVEAGADIVTFHIEATKHAMKVIQLVKEAGAKVGITFNPATPVS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+E V+ +D +L+MT+NPG + I+ T+ KI Q + + +EVDG + ++
Sbjct: 121 FIEPVLSLVDQVLVMTINPGTENKHFIQETVVKIEQLDVIRKQNDYTYDIEVDGKIDNQT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
IK +AGAD+ V G FN K ++++ L +S
Sbjct: 181 IKVCSKAGADIFVSGGFIFNGKNTPQ--EQIDKLNQS 215
>gi|254824978|ref|ZP_05229979.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|255521941|ref|ZP_05389178.1| ribulose-5-phosphate 3-epimerase [Listeria monocytogenes FSL
J1-175]
gi|293594217|gb|EFG01978.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
Length = 224
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LGEE+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGEELCRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRKIRSYNVKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +D+++M+L+MTVNPGF GQ+ + K+ KA + + +EVDG + +
Sbjct: 123 IYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKAKLAGKVHAPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SYA+RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYAERL 213
>gi|195953259|ref|YP_002121549.1| Ribulose-phosphate 3-epimerase [Hydrogenobaculum sp. Y04AAS1]
gi|195932871|gb|ACG57571.1| Ribulose-phosphate 3-epimerase [Hydrogenobaculum sp. Y04AAS1]
Length = 219
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 132/213 (61%), Gaps = 4/213 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
+ PSIL+A+F LG++I K GA IHFDVMDG FVPNI+ G V+ L+ + F
Sbjct: 4 LAPSILSANFWNLGKDIEATLKGGADIIHFDVMDGAFVPNITVGPYVLECLKEKLPNVTF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI++ D++I +AG +++ H E+ PHI R++ I +G K GVAINP T +
Sbjct: 64 DAHLMINNPDAYIKEFVEAGASMVSVHIENVPHIHRTVELIKTLGAKAGVAINPGTSLDS 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+++++ D IL+M+VNPGFGGQ I+ +I + + K I ++ ++ +E+DGG+ N+
Sbjct: 124 IDEIVHYADYILLMSVNPGFGGQSFIDRSIVRAKSLKQRILEKGLNCLVEMDGGLKFNNL 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + D+ V+GS F +K S +++ D
Sbjct: 184 HLVKEY-VDIFVIGSGIFKEKDIESITRKIKDF 215
>gi|239793659|dbj|BAH72934.1| ACYPI003993 [Acyrthosiphon pisum]
Length = 204
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 3/188 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SY 60
T S +I PS+L AD S+L E + +GA +H DVMDG FVPN++FG V++ LR
Sbjct: 4 TLSCKIGPSVLNADLSQLYNESQKLIDSGADYLHLDVMDGTFVPNLTFGHPVVKCLRTKL 63
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++VF+ H+M+ + I+ +ADA D TFH E + R I G K G+AI P
Sbjct: 64 PNAVFETHMMVQNPLQWISAMADANVDQYTFHIEPCDDVPLVCRKIKEAGMKVGLAIKPG 123
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TPV +E+ ID DMIL+MTV PGFGGQ+ + +PKI + ++ +EVDGG+
Sbjct: 124 TPVTCVEEYIDMADMILVMTVEPGFGGQKFMTDMMPKIEILRE--KYPTMDIEVDGGIGP 181
Query: 181 RNIKSLVQ 188
NI +
Sbjct: 182 NNIDVCAK 189
>gi|303325491|ref|ZP_07355934.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. 3_1_syn3]
gi|302863407|gb|EFL86338.1| ribulose-phosphate 3-epimerase [Desulfovibrio sp. 3_1_syn3]
Length = 240
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 138/219 (63%), Gaps = 6/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+L+ADFSRL EE++ + AG +H DVMDG FVPNI+FG +I++LR +S
Sbjct: 1 MILSPSLLSADFSRLAEELAALEAAGVTWLHLDVMDGAFVPNITFGPPLIKALRPHSGLF 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLM+ ++ +AG D++ H E+ H +R+L I +G K G+A+NP T ++
Sbjct: 61 FDVHLMVEEPARYLRDFKEAGADLLVIHAEADRHAQRTLTEIRKLGLKAGLALNPGTDLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSR 181
+ ++D++L+M+VNPGF GQ I T KIR A+AL+ + ++ ++VDGG
Sbjct: 121 AARWLAPDLDLLLLMSVNPGFSGQAFIPQTYEKIRAARALLAEAGVAGALVQVDGGACPE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
N+ +L+ AGAD+LV GS+FF K Y RL K+A
Sbjct: 181 NVAALLDAGADVLVSGSAFFGHK---PYDARLAAFMKAA 216
>gi|254830516|ref|ZP_05235171.1| hypothetical protein Lmon1_04107 [Listeria monocytogenes 10403S]
Length = 222
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/215 (30%), Positives = 121/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ + +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+S + ++ I +G + +A++P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASRDVNATINHIRELGIRPSIALSPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ + SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLRE 217
>gi|313901539|ref|ZP_07834984.1| ribulose-5-phosphate 3-epimerase [Thermaerobacter subterraneus DSM
13965]
gi|313468200|gb|EFR63669.1| ribulose-5-phosphate 3-epimerase [Thermaerobacter subterraneus DSM
13965]
Length = 286
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 135/214 (63%), Gaps = 4/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
++PS+L+ADF+RL EE+ GA +H DVMDG FVPN++FG ++ ++R + D
Sbjct: 58 VLPSLLSADFTRLAEEVRAAEAGGAAGLHLDVMDGRFVPNLTFGPMIVAAVRRLTRLPLD 117
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ ++ + +A AG D+IT H E++PH+ R+++ I A+G + GVA+NP TP +
Sbjct: 118 VHLMVERPEALLPAVAQAGADVITVHVEATPHVHRAVQMIRALGCRAGVALNPGTPAVAV 177
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
E ++ E+D+IL+M+VNPGFGGQ + + K+R +A++ LEVDGG+
Sbjct: 178 EPLLGEVDLILVMSVNPGFGGQAFLPLALDKLRALRAMLPAAGPRPWLEVDGGIDPATAP 237
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AGADLLV GS+ +N + + L+ L++
Sbjct: 238 LAAAAGADLLVAGSAVYNGQAPV--GTNLHRLRQ 269
>gi|254853868|ref|ZP_05243216.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|255520974|ref|ZP_05388211.1| ribulose-5-phosphate 3 epimerase [Listeria monocytogenes FSL
J1-175]
gi|300765150|ref|ZP_07075136.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
gi|258607253|gb|EEW19861.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL R2-503]
gi|300514121|gb|EFK41182.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N1-017]
Length = 222
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/215 (32%), Positives = 124/215 (57%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKAGSYTEKLASLRE 217
>gi|150399191|ref|YP_001322958.1| ribulose-phosphate 3-epimerase [Methanococcus vannielii SB]
gi|150011894|gb|ABR54346.1| Ribulose-phosphate 3-epimerase [Methanococcus vannielii SB]
Length = 218
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 72/217 (33%), Positives = 115/217 (52%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+AD+ + EE+ A H D+MDG FVPN+S G V L+ +D
Sbjct: 2 VMIGASILSADYGNMSEEVKKAENAKIDFFHVDIMDGHFVPNLSLGLSVPMDLKKITDFP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + I +A +++ FH ES+ ++ +++ I G K +A+NP T +
Sbjct: 62 LDVHLMVENPEKFIPKVA-GYAEMVAFHAESTKYLFKTIDLIKEYGAKPIIALNPSTTID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
LE V+DE+ +L+M+V PGF GQ I + KI K I + + VDGG+
Sbjct: 121 CLEYVLDELYGVLVMSVEPGFSGQSFINPMVKKIDVLKKKITSENYDTKIFVDGGINVNT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+V GAD L+ S+ + ++ S +N+L+ S
Sbjct: 181 APKVVAVGADALIAASAIYGKEDINS---AVNELRNS 214
>gi|269963474|ref|ZP_06177800.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831771|gb|EEZ85904.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 222
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 127/214 (59%), Gaps = 4/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS++ DFS+L E+ + KA +H DVMDG FVPN + G + I+++R+ +D +
Sbjct: 3 KFCPSMMCVDFSKLASELKELEKANVDMLHIDVMDGHFVPNFALGPEDIKAIRNLTDIEY 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S D I++ A G ++ H E+ PH+ RSL I A G K+G+AINP TP++
Sbjct: 63 DVHLMLSDPDQFIDLFAALGPKLMYIHAEAPPHLHRSLGNIQAKGIKSGLAINPGTPLSA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+EDV+D D+IL+M+VNPGF GQ I + +I + +I + + +DG ++ I
Sbjct: 123 IEDVLDVTDVILVMSVNPGFAGQAFIPNAYNRIERIIEMIEAKGTSTKIAIDGAISPEVI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L + ++G++ K SYA + DL+
Sbjct: 183 ERLSDK-VEYFILGTAGLFGK-PKSYADTMQDLR 214
>gi|16799574|ref|NP_469842.1| hypothetical protein lin0499 [Listeria innocua Clip11262]
gi|16412939|emb|CAC95731.1| lin0499 [Listeria innocua Clip11262]
Length = 222
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 68/215 (31%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVKNAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + ++ I +G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRELGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ ++++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLEKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLRE 217
>gi|315305015|ref|ZP_07875073.1| ribulose-phosphate 3-epimerase family protein [Listeria ivanovii
FSL F6-596]
gi|313626613|gb|EFR95688.1| ribulose-phosphate 3-epimerase family protein [Listeria ivanovii
FSL F6-596]
Length = 224
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 3/211 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 3 KIAASIMCADQLHLGDELKRLESAGVELLHCDVMDGVYVNNLALGPEHLGIVRNNTEIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + +I++ + I+FH E + + +R I + K +AINPETP+
Sbjct: 63 DIHLATITPLKYIDMFGPVKPEYISFHVEVADDVTEVIRKIRSYNIKPSIAINPETPIEA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNI 183
+ +++++M+L+MTVNPGF GQ+ + K+R KA + +EVDG + +
Sbjct: 123 IYPYLNDVEMVLMMTVNPGFAGQKFQTDVLQKLRDLKAKLAGKVHVPLIEVDGNINKETV 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ D+ V+G S+ F+ + + SY++RL
Sbjct: 183 GLMRDCLPDIYVLGTSALFHDRDKTSYSERL 213
>gi|284800774|ref|YP_003412639.1| hypothetical protein LM5578_0522 [Listeria monocytogenes 08-5578]
gi|284993960|ref|YP_003415728.1| hypothetical protein LM5923_0521 [Listeria monocytogenes 08-5923]
gi|284056336|gb|ADB67277.1| hypothetical protein LM5578_0522 [Listeria monocytogenes 08-5578]
gi|284059427|gb|ADB70366.1| hypothetical protein LM5923_0521 [Listeria monocytogenes 08-5923]
Length = 222
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 67/215 (31%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+S + ++ I +G + +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASRDVNATINHIRELGIRPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ + SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLRE 217
>gi|46906744|ref|YP_013133.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|254933253|ref|ZP_05266612.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|46880009|gb|AAT03310.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes serotype 4b str. F2365]
gi|293584813|gb|EFF96845.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes HPB2262]
gi|328475803|gb|EGF46539.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes 220]
gi|332310921|gb|EGJ24016.1| hypothetical protein LMOSA_14040 [Listeria monocytogenes str. Scott
A]
Length = 222
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/215 (32%), Positives = 124/215 (57%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T +
Sbjct: 63 DIHLATVNPDRFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQRELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLRE 217
>gi|304398669|ref|ZP_07380541.1| Ribulose-phosphate 3-epimerase [Pantoea sp. aB]
gi|304353880|gb|EFM18255.1| Ribulose-phosphate 3-epimerase [Pantoea sp. aB]
Length = 230
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PS++ + + ++ + + A +H D+MDG +V NI+ I +R ++
Sbjct: 4 QISPSLMCMNLMEIKHQLQ-VLDSRADFLHVDIMDGHYVKNITLSPFFIEQIRPFTRVAI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I +A AG D I H E+ + R + I + GKK GV +NP TP++
Sbjct: 63 DVHLMVEEPTNFIEAVAKAGADYICPHAETINRDAFRVINLIRSYGKKVGVVLNPATPIS 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
++ I +D I +MTV+PG+ GQ I + K+R+ KAL + +E+DG +R
Sbjct: 123 YIQHYIHLLDKITVMTVDPGYAGQPFIPEMVEKVRELKALKQQHGYHYLIEIDGSCNTRT 182
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
L+ AGA++L+VG S FN +++ A ++
Sbjct: 183 YHQLIGAGAEVLIVGTSGLFNIHDDLATAWKM 214
>gi|47094725|ref|ZP_00232340.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|224500405|ref|ZP_03668754.1| hypothetical protein LmonF1_12354 [Listeria monocytogenes Finland
1988]
gi|254829408|ref|ZP_05234095.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|254900275|ref|ZP_05260199.1| hypothetical protein LmonJ_10690 [Listeria monocytogenes J0161]
gi|254911171|ref|ZP_05261183.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes J2818]
gi|254935499|ref|ZP_05267196.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|47016865|gb|EAL07783.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|258601822|gb|EEW15147.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL N3-165]
gi|258608076|gb|EEW20684.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes F6900]
gi|293589098|gb|EFF97432.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes J2818]
Length = 222
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 66/215 (30%), Positives = 121/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ + +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+S + ++ I +G + +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASRDVNATINHIRELGIRPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ + SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLRE 217
>gi|290894371|ref|ZP_06557335.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
gi|290556078|gb|EFD89628.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-071]
Length = 222
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + ++ I +G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRELGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLRE 217
>gi|313634777|gb|EFS01213.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
Length = 222
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + KA K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEKAKVKMLHCDVMDGVFVANTAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + ++ I ++G K +AI+PET +
Sbjct: 63 DVHLATVNPDEFVDLYAAIKPAYMSFHVENSPDVAATISHIRSLGIKPSIAISPETAIEK 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +DE+DM+L+MTVNPGF GQ+ + KI+Q K + + +EVDG + +
Sbjct: 123 IYPFLDEVDMVLMMTVNPGFAGQKFQRHVLEKIQQLKKELENHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L G D+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGVDIYVVGTAALFNDKTGSYTEKLAPLRE 217
>gi|313624980|gb|EFR94879.1| ribulose-phosphate 3-epimerase family protein [Listeria innocua FSL
J1-023]
Length = 222
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDILL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + ++ I +G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRELGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKTGSYTEKLAPLRE 217
>gi|254824227|ref|ZP_05229228.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
gi|254992413|ref|ZP_05274603.1| ribulose-5-phosphate 3 epimerase [Listeria monocytogenes FSL
J2-064]
gi|293593460|gb|EFG01221.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-194]
Length = 222
Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 70/215 (32%), Positives = 124/215 (57%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLRE 217
>gi|226223124|ref|YP_002757231.1| ribulose-5-phosphate 3 epimerase [Listeria monocytogenes Clip81459]
gi|225875586|emb|CAS04289.1| Putative ribulose-5-phosphate 3 epimerase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 222
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 70/215 (32%), Positives = 124/215 (57%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQRELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLRE 217
>gi|291618343|ref|YP_003521085.1| AlsE [Pantoea ananatis LMG 20103]
gi|291153373|gb|ADD77957.1| AlsE [Pantoea ananatis LMG 20103]
Length = 231
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 73/223 (32%), Positives = 119/223 (53%), Gaps = 7/223 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PS++ + + +++ + A +H D+MDG +V NI+ I +R ++
Sbjct: 4 IQISPSLMCMNLMEIKQQL-AVLNTRADFLHVDIMDGHYVKNITLSPFFIEQIRPHTPVA 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ I +A+AG D I H E+ + R + I ++GKK GV +NP TPV
Sbjct: 63 IDVHLMVEQPTDFIEAVANAGADYICPHAETINRDAFRVINLIRSLGKKPGVVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ + + +D I +MTV+PG+ GQ I + KIR AL +E+DG R
Sbjct: 123 SFIHHYLHLLDKITVMTVDPGYAGQPFIPEMVEKIRALSALKRAHGYHYLIEIDGSCNQR 182
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSALAI 223
++L++AGA++L+VG S FN ++S A + ++ S A
Sbjct: 183 TYRTLLEAGAEVLIVGTSGLFNLHDDLSTAWTM--MRDSIDAA 223
>gi|261822956|ref|YP_003261062.1| allulose-6-phosphate 3-epimerase [Pectobacterium wasabiae WPP163]
gi|261606969|gb|ACX89455.1| Ribulose-phosphate 3-epimerase [Pectobacterium wasabiae WPP163]
Length = 230
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 115/211 (54%), Gaps = 5/211 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ + + +++ + + A +H D+MDG +V NI+ I +R ++ V
Sbjct: 4 KISPSLMCMNLMEIKQQL-AVLNSRADFLHVDIMDGHYVKNITLSPFFIEQIRPHTPLVI 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + I+ IA AG D I H E+ + R + I A+GKK GV +NP TP+
Sbjct: 63 DVHLMVETPTDFIDAIAKAGADYICPHAETINRDAFRVINQIRALGKKVGVVLNPATPIE 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ I +D I IMTV+PG+ GQ I + KI Q KAL + S +E+DG +
Sbjct: 123 FIHHYIHLLDKITIMTVDPGYAGQPFIPEMLQKIAQLKALKQQHGYSYLIEIDGSCNQKT 182
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
L+ AGA++L+VG S FN +++ +
Sbjct: 183 YGMLLDAGAEVLIVGTSGLFNLHDDLATSWE 213
>gi|326803470|ref|YP_004321288.1| D-allulose-6-phosphate 3-epimerase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651209|gb|AEA01392.1| D-allulose-6-phosphate 3-epimerase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 229
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 5/215 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++I PS++ D S+ E+I+ + + H D+MDG FVPNI+ I ++ S
Sbjct: 1 MSEVKIAPSLMCMDLSKFNEQITFLNQN-VDSYHVDIMDGHFVPNITLSPWFIEEVKKVS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPE 120
D HLM++ + + + + CD I H E + R + IH G K GV +NPE
Sbjct: 60 DVPISSHLMVNDMSFWVKKMINLNCDWICMHVERLNGLAFRLIDQIHDAGLKAGVVLNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
T + + ID +D + IMTV+PGF GQ+ + + KI+Q K L K + + +EVDG
Sbjct: 120 TAIESIYPYIDLVDKVTIMTVDPGFAGQRFLPVALEKIKQLKELKEKYNYNYVIEVDGSC 179
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
+ K + ++G + +VG S FN G+I A +
Sbjct: 180 NEKTFKVIKESGTESFIVGNSGLFNLAGDIDEAWQ 214
>gi|217965415|ref|YP_002351093.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes HCC23]
gi|217334685|gb|ACK40479.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes HCC23]
gi|307570029|emb|CAR83208.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes L99]
Length = 222
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 123/215 (57%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + ++ I A+G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRALGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ ++++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLEKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLRE 217
>gi|254478100|ref|ZP_05091483.1| Ribulose-phosphate 3 epimerase family protein [Carboxydibrachium
pacificum DSM 12653]
gi|214035962|gb|EEB76653.1| Ribulose-phosphate 3 epimerase family protein [Carboxydibrachium
pacificum DSM 12653]
Length = 214
Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILAAD + LG+E+ + K G IH DV+DG + N F ++ L+ ++
Sbjct: 1 MKISASILAADTAFLGKEVLELEKLGIDFIHVDVIDGHYANNFGFSPKTVKDLKRITNLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HL I + +++I ++AG DII ++ H R LR I A+GKK GVA++P
Sbjct: 61 IEVHLEILNPENYIETFSEAGADIIIVQFDTCSHPLRILRKIKALGKKAGVALSPCVSFE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L ++++D +L M+V PGFGGQ TI KI+ AK + + I + VDGGV N
Sbjct: 121 SLRWCLNDVDYLLFMSVEPGFGGQNFETFTIDKIKLAKVQLKEMGFSIPIGVDGGVNLGN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I L + G D++VVGS+ F + + + ++
Sbjct: 181 INLLREVGVDIVVVGSALFLNENKERFIFQIK 212
>gi|229544972|ref|ZP_04433697.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|256961103|ref|ZP_05565274.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|293384049|ref|ZP_06629943.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|293386863|ref|ZP_06631433.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|312908000|ref|ZP_07766983.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|312978472|ref|ZP_07790210.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
gi|229309864|gb|EEN75851.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|256951599|gb|EEU68231.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|291078529|gb|EFE15893.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|291083697|gb|EFE20660.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|310626091|gb|EFQ09374.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|311288621|gb|EFQ67177.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
Length = 222
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 4/220 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS+ ++ SRL + + + K +H DVMDG FVP+++ G +++ L+ +
Sbjct: 1 MKEYILAPSLFSSKISRLEKTLETLEIEEIKWLHVDVMDGYFVPDMASGPSIVKELKEIT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D + D HLM+ + + + +AG D IT+H E++ + ++ + KK GVAINP T
Sbjct: 61 DILLDVHLMVETPEKIVPAFLEAGADSITYHAEATNNGMHIIQMVKEQKKKIGVAINPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
PV+++ ++ E+D++L+MT+NPG + I T+ KI + L +EVDG +
Sbjct: 121 PVSLIAPILAEVDLVLVMTINPGRPNRDFIPLTVNKIAELSQLRESNDYHYLIEVDGKID 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ IK AG D+ V G F ++ + + + +LK +
Sbjct: 181 NETIKLCANAGTDMFVSGGYIFGEENKE--VEMITNLKTA 218
>gi|152993732|ref|YP_001359453.1| ribulose-phosphate 3-epimerase [Sulfurovum sp. NBC37-1]
gi|151425593|dbj|BAF73096.1| ribulose-phosphate 3-epimerase [Sulfurovum sp. NBC37-1]
Length = 213
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSIL+ADF L ++ I + G +H DVMDG FVPN++ G V+ ++ +
Sbjct: 1 MLVAPSILSADFGHLARDVKAICEGGCDLVHVDVMDGHFVPNLTIGPVVVEAVAKAATKP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + +++ A + I+FH E H R ++ I ++G + + +NP T
Sbjct: 61 LDIHLMVENNSFFVDLFAPLKPEFISFHIEEEKHPHRLVQKIRSLGIRPSIVLNPHTLPE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+E +++++ M+L+M+VNPGFGGQ+ I S I K ++ K LI KR+ + +EVDGGV N
Sbjct: 121 AVEFLLEDLGMVLLMSVNPGFGGQKFIPSVIEKAQRLKTLIEKRNPNCLIEVDGGVNDVN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+K L AG D++V GS F + + + LK
Sbjct: 181 VKELAAAGVDVVVAGSYVFKHPNGV--KEAIASLK 213
>gi|124025511|ref|YP_001014627.1| ribulose-phosphate 3-epimerase [Prochlorococcus marinus str.
NATL1A]
gi|123960579|gb|ABM75362.1| Ribulose-phosphate 3-epimerase [Prochlorococcus marinus str.
NATL1A]
Length = 250
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 128/229 (55%), Gaps = 11/229 (4%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+QI+PS+L AD++ +G+ + ++ AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 14 RPVQIIPSVLPADWANMGQCVKDLELAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCS 73
Query: 63 SVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
F+ LM+S + ++ + +A ++ H E++ H+ R L I +G
Sbjct: 74 VPFETQLMVSQYNCETMLEGYVEASKGANGEPGVVIAHAEANVHLHRILGKIRQLGGSPS 133
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
VA+NP TP+ +++DV+D +D +L+MTVNPGFGGQ I + + KI Q + I ++ +
Sbjct: 134 VALNPHTPMDMVKDVLDMVDHVLVMTVNPGFGGQAYIPTMLNKITQLRKTILDNGYNVDI 193
Query: 173 EVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
EVDGG+ + ++ AGA+ + GS F L + A
Sbjct: 194 EVDGGIKADWSLSQCCAAGANCFIAGSGMFAYPTLKEGCDALRKVANDA 242
>gi|257866469|ref|ZP_05646122.1| ribulose-phosphate 3 epimerase [Enterococcus casseliflavus EC30]
gi|257873016|ref|ZP_05652669.1| ribulose-phosphate 3 epimerase [Enterococcus casseliflavus EC10]
gi|257800427|gb|EEV29455.1| ribulose-phosphate 3 epimerase [Enterococcus casseliflavus EC30]
gi|257807180|gb|EEV36002.1| ribulose-phosphate 3 epimerase [Enterococcus casseliflavus EC10]
Length = 220
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 126/223 (56%), Gaps = 4/223 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I + PS++ ADFS L +E++ + A H DVMDG FVPN G I ++ +
Sbjct: 1 MKKKI-LCPSMMCADFSMLKDEVAALQAAKIDIFHLDVMDGRFVPNFGMGLQDIEAICKW 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S+++ D HLMI +++ AD G DII FHPE+ H R++ I GK+ G+AINP
Sbjct: 60 SETLVDVHLMIEDPGAYVEKFADMGVDIIYFHPEADRHPTRTINKIKQKGKQAGIAINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T VA++E+++ ID +++MTV+PGF GQ + KI+Q A+ + L DG ++
Sbjct: 120 TSVAMIEELLPLIDYVMVMTVDPGFSGQAYLTHVEGKIKQLAAVKERYFYQLMADGAISP 179
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSALA 222
+ L G D V+G S+ F ++ SY + ++ K+ A
Sbjct: 180 AVMTRLSALGVDGFVLGTSALFGKE--ESYQELISIYKEEDQA 220
>gi|297544126|ref|YP_003676428.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841901|gb|ADH60417.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 215
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 1/213 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS++ A++ L EE+ N+ +AGA H DVMDG FVPN G I+ +R +
Sbjct: 4 ILCPSMMCANYDYLKEEVINLDRAGADIFHIDVMDGIFVPNFGMGLQDIQCIRKNTKKPI 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI + ++++ + ++ G DII HPE+ H R+L I A+ K G+AINP T +
Sbjct: 64 DVHLMIINPENYVELFSELGADIIYIHPEAGGHPARTLEKIRALNKFRGIAINPGTSIET 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+ +++ +D +L+MTVNPGF GQ+ ++ KI++ L + VDG ++ I
Sbjct: 124 VIELLALVDYVLVMTVNPGFAGQRYLDFVNQKIKKLVLLKKDYGYKIMVDGAISPERINE 183
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + G D ++G+S K E Y L LKK
Sbjct: 184 LSKWGVDGFILGTSSLFGKNE-DYKDILERLKK 215
>gi|47093123|ref|ZP_00230899.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 4b H7858]
gi|47018496|gb|EAL09253.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes str. 4b H7858]
gi|328467568|gb|EGF38630.1| ribulose-5-phosphate 3 epimerase [Listeria monocytogenes 1816]
Length = 222
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 124/215 (57%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ +D L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCSDSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + +++ I A+G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKHIRALGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQRELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLRE 217
>gi|20806711|ref|NP_621882.1| Pentose-5-phosphate-3-epimerase [Thermoanaerobacter tengcongensis
MB4]
gi|20515166|gb|AAM23486.1| Pentose-5-phosphate-3-epimerase [Thermoanaerobacter tengcongensis
MB4]
Length = 214
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 2/208 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SILAAD + LG+E+ + K G IH DV+DG + N F ++ LR +D
Sbjct: 1 MKISASILAADTAFLGKEVLELEKLGIDFIHVDVIDGHYANNFGFSPKTVKDLRRITDLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HL I + ++++ I ++AG DII ++ H R LR I A+GKK GVA++P
Sbjct: 61 IEVHLEILNPENYVEIFSEAGADIIIVQFDTCSHPLRILRKIKALGKKAGVALSPCVSFE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L ++++D +L M+V PGFGGQ TI KI+ AK + + I + VDGGV N
Sbjct: 121 SLRWCLNDVDYLLFMSVEPGFGGQNFETFTIDKIKLAKVQLKEMGFSIPIGVDGGVNLGN 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYA 210
I L + G D++VVGS+ F + + +
Sbjct: 181 INLLREVGVDIVVVGSALFLNENKERFI 208
>gi|16802542|ref|NP_464027.1| hypothetical protein lmo0499 [Listeria monocytogenes EGD-e]
gi|224502200|ref|ZP_03670507.1| hypothetical protein LmonFR_06717 [Listeria monocytogenes FSL
R2-561]
gi|16409875|emb|CAC98578.1| lmo0499 [Listeria monocytogenes EGD-e]
Length = 222
Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats.
Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ + +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+S + ++ I +G + +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHLEASRDVNATINHIRELGIRPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ + ++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLGKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L GAD+ VVG++ + SY ++L L++
Sbjct: 183 RLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLRE 217
>gi|116512342|ref|YP_809558.1| ribulose-5-phosphate 3-epimerase [Lactococcus lactis subsp.
cremoris SK11]
gi|116107996|gb|ABJ73136.1| ribulose-5-phosphate 3-epimerase [Lactococcus lactis subsp.
cremoris SK11]
Length = 216
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ + + PS++ A+F+ L ++ ++ AG H D+MDG FVPN G +RS
Sbjct: 1 MSKKL-LCPSMMCANFANLEKDTKDLEVAGVDIFHMDIMDGSFVPNFGMGLQDYELIRSV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D D HLM+ + +++ + +D G DII HPE+ H +L I A GKK G+AINP
Sbjct: 60 TDKPLDVHLMVQNPSNYVEMFSDLGADIIYIHPEADIHPACTLDKIRAKGKKVGIAINPG 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T + + +++ +D +IMTVNPGF GQ+ +E KI +A L + + VDG ++
Sbjct: 120 TSIEAVIELLPLVDYFMIMTVNPGFAGQKYLEYVNSKIEKAVLLSKQFDFKVMVDGAISP 179
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK 217
+ I+ L + G + ++G S+ F + +Y +N+L+
Sbjct: 180 QKIEELSKLGVEGFILGTSALFGKH--KNYETIINELR 215
>gi|329298467|ref|ZP_08255803.1| allulose-6-phosphate 3-epimerase [Plautia stali symbiont]
Length = 226
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 5/213 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + PS++ D +R E+I + + A H D+MDG +V NI+ I +LR +D
Sbjct: 2 NARFSPSLMCMDLTRFREQIEAMNAS-ASFYHVDIMDGSYVKNITLSPFFIENLRKITDV 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
D HLM++ + I + DAG DII+FHPE++ + R L I G++ GV +NP TP
Sbjct: 61 PIDLHLMVNHPEDIIPMCIDAGADIISFHPETANNKNFRLLTQIKEAGRRCGVVLNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ + +D + +M+V+PGF GQ I T+ KIRQ A+ E+DG +
Sbjct: 121 ADSIREYAHLLDKVTVMSVDPGFAGQTFIPETLNKIRQLIAMRESHGYHYLTEIDGSCNA 180
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
R K + +G D+ +VG S FN +++ A +
Sbjct: 181 RTFKQIAASGVDVFIVGTSGLFNLDDDVAQAWQ 213
>gi|239626167|ref|ZP_04669198.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47_FAA]
gi|239520397|gb|EEQ60263.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47FAA]
Length = 225
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 7/215 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P PS++ D + E++ I A H D+MDG +V NI+ D +++R
Sbjct: 1 MKP--MFNPSLMCMDLLNIKEQLQ-ILNTRADFYHVDIMDGHYVKNITLSPDFCKAIRPV 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP 119
+ DCHLM+++ D I +A AG I H E+ + R + IH++G K GV +NP
Sbjct: 58 CEIPLDCHLMVTTPDDFIEPLAKAGVGYICPHAETINADAFRIVNKIHSLGCKVGVVLNP 117
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
TPV+ ++ I +D + +MTV+PGF GQ I + KI + KAL ++ +EVDG
Sbjct: 118 ATPVSYIQHYIHLLDKVTVMTVDPGFAGQPFIREMLDKISELKALKEEKGYGYLIEVDGS 177
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAK 211
R L +AG ++ +VG S FN +++ A
Sbjct: 178 CNERTFGDLAKAGTEVFIVGTSGLFNLDKDLAAAW 212
>gi|154345055|ref|XP_001568469.1| ribulose-phosphate 3-epimerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065806|emb|CAM43583.1| putative ribulose-phosphate 3-epimerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 253
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 6 QIVPSILAADFSRLG-EEISNITKAG--AKQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PS++ AD ++L E + +++ G A IH D++DG F N SF + LR +
Sbjct: 26 IISPSLMVADQTKLLLESLDVLSENGGSADWIHVDIVDGHFASNFSFCPATVSDLRKHLP 85
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ DCH++IS+ ++ AG FH E++ R + G GVA+ P+T
Sbjct: 86 NTFLDCHMIISNPIRWVDTFVKAGASTFVFHYEATEDPVAVCRKVRKAGMVAGVALRPDT 145
Query: 122 PVAILEDVI--DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P L +I DE+DM+L+M V GF GQ T+ K+R + + ++VDG +T
Sbjct: 146 PAERLFPLIDADEVDMVLVMCVQIGFAGQTFKPETVEKVRLLRQRY--PHLLIQVDGCIT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + AGA+ +V G + F ++L
Sbjct: 204 LETIDLVAAAGANAIVPGRAVFKSNDRKGSMEKLRS 239
>gi|313679260|ref|YP_004056999.1| ribulose-phosphate 3-epimerase [Oceanithermus profundus DSM 14977]
gi|313151975|gb|ADR35826.1| Ribulose-phosphate 3-epimerase [Oceanithermus profundus DSM 14977]
Length = 221
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P + +LAAD RL EE++ + +AGA IH DVMDG F P I + R++R +
Sbjct: 1 MPETLLSVGVLAADLGRLAEELARLEEAGADWIHLDVMDGVFAPQILGDVALFRAVRRLT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ + + H+ G D IT H E+ PH+ R++ +G + GVA+NP T
Sbjct: 61 SLPLDVHLMVQNPERHVAAF--EGADWITVHAEAGPHLHRAVAEAKRVGARAGVALNPGT 118
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGV 178
++ + ++DEID++L + V+PGF G + T+ K+ Q + + + + VDGG+
Sbjct: 119 HISGVVALVDEIDLVLFVAVDPGFPGGGFVRGTLRKVAQLRRKLDDLGVSGVRIGVDGGI 178
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N + +GAD++V GS+ F G + +
Sbjct: 179 DLTNAAEVAASGADVVVSGSAVFKGAGPEENIQAFH 214
>gi|297618736|ref|YP_003706841.1| ribulose-phosphate 3-epimerase [Methanococcus voltae A3]
gi|297377713|gb|ADI35868.1| ribulose-phosphate 3-epimerase [Methanococcus voltae A3]
Length = 220
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 121/219 (55%), Gaps = 7/219 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-S 63
+ I SIL+A++ + EE+ +A H D+MDG FVPN+S G V L+ + +
Sbjct: 2 VMIGASILSANYGHMAEEVRRAEEAKVDFFHVDIMDGHFVPNLSMGLKVPEYLQDITHGT 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + D I IA+A D+++FH E++ + R++ I G K VA+NP T +
Sbjct: 62 KIDVHLMVENPDIFIPKIAEA-SDMVSFHAEATKFLFRTVDLIADNGAKPIVALNPSTSI 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
+ +E V++ + +LIMTV PGF GQ I + KI + K LI + VDGG+ +
Sbjct: 121 SNIEYVLENLYGVLIMTVEPGFSGQSFINPMLKKIDKLKNLILTEGYDTKIFVDGGINTT 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V+AGAD L+ S+ + + K + DL+ SA
Sbjct: 181 TAPKVVEAGADALIAASAIYGKDD---VVKAVQDLRASA 216
>gi|295693448|ref|YP_003602058.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus ST1]
gi|295031554|emb|CBL51033.1| Ribulose-phosphate 3-epimerase [Lactobacillus crispatus ST1]
Length = 225
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 122/216 (56%), Gaps = 6/216 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DS 63
+ I PSIL AD L E+I KAG + H D+MDG FVPN+SFG ++++ + D+
Sbjct: 1 MIIAPSILNADNLNLEEKIDEAKKAGISRFHIDIMDGHFVPNLSFGPELVKDFKKNFRDT 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM + ++ I AG D+I H E+ + L +H K GV +NP+T
Sbjct: 61 FAEVHLMSDNPNTFIPAFTKAGADLIEIHYEAMSEDSLIHWLDYMHEHQIKAGVVLNPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
P ++L+ ++D +L+MTV PGFGGQ+ I+ + KI + ++++ + +EVDGG+
Sbjct: 121 PASVLKKFATKVDQVLVMTVYPGFGGQKFIDES-KKITEIQSILNGVNSKAPIEVDGGIN 179
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+R I +AGA + VVGS F + KRL+
Sbjct: 180 NRTIDIAKKAGASVFVVGSYIFGKSNVPLTIKRLSK 215
>gi|72382012|ref|YP_291367.1| ribulose-5-phosphate 3-epimerase [Prochlorococcus marinus str.
NATL2A]
gi|72001862|gb|AAZ57664.1| ribulose-5-phosphate 3-epimerase [Prochlorococcus marinus str.
NATL2A]
Length = 250
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 127/229 (55%), Gaps = 11/229 (4%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+QI+PS+L AD++ +G+ + ++ AG +I FDVMDG FVPN++FG ++I + R Y
Sbjct: 14 RPVQIIPSVLPADWANMGQCVKDLELAGVDRIQFDVMDGNFVPNLTFGPEMISACRKYCS 73
Query: 63 SVFDCHLMIS--SIDSHINIIADA------GCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
F+ LM+S + ++ + +A ++ H E++ H+ R L I +G
Sbjct: 74 VPFETQLMVSQYNCETMLEGYVEASKGANGEPGVVIAHAEANVHLHRILGKIRQLGGSPS 133
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISL 172
VA+NP TP+ +++DV+D +D +L+MTVNPGFGGQ I + + KI Q + I + +
Sbjct: 134 VALNPHTPMDMVKDVLDMVDHVLVMTVNPGFGGQAYIPTMLNKITQLRKTILDNGYDVDI 193
Query: 173 EVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
EVDGG+ + ++ AGA+ + GS F L + A
Sbjct: 194 EVDGGIKADWSLSQCCAAGANCFIAGSGMFAYPTLKEGCDALRKVANDA 242
>gi|266624686|ref|ZP_06117621.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
gi|288863446|gb|EFC95744.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
Length = 239
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 5/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T + PS++ D ++ E+ + K H D+MDG F N++ +++S R ++
Sbjct: 11 TNMVTFAPSLMCMDLGKIKEQF-AVMDQYMKLYHVDIMDGHFCKNMALTPGILKSFREHT 69
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HLM ++ I + A AG I+ H E+ + R+++ I +G K GV +NP
Sbjct: 70 NTDIDVHLMTTNPSDWIEMCAAAGATYISPHAETINTDAFRTMQMIQKLGCKCGVVLNPA 129
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGV 178
TP++ +E ++ IDM+ IMTV+ GF GQ+ I+ KI QAK L K +++DG
Sbjct: 130 TPLSYVESYLEYIDMLTIMTVDIGFAGQKFIDQMYNKIMQAKELREKNGYHYKIQIDGHC 189
Query: 179 TSRNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRLNDL 216
N + L +AGAD+L+VG++ F ++ A R ++
Sbjct: 190 NKENYRQLAEAGADVLIVGNAGLFGLDQDLDTACRKMEM 228
>gi|227484659|ref|ZP_03914975.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
gi|227237379|gb|EEI87394.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
Length = 219
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 122/216 (56%), Gaps = 3/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSIL+A+F+ L ++ G K IH DVMDG FVPNISF VI +R +D
Sbjct: 2 VRLSPSILSANFANLQGDLDQTKGCGLKMIHIDVMDGIFVPNISFAFKVISDIRDKNDYF 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI +I+ AG D IT H E+ ++ +L+ I G + G+ PET
Sbjct: 62 FDTHLMIEEPIRYIDEFKKAGSDRITVHYEACKDLKATLKAIRDAGMEVGLTAKPETDPK 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+L D+ID+IL+M+V PGFGGQ+ +E T + + I + ++ + +VDGG+ + N
Sbjct: 122 LLLKYFDQIDLILVMSVRPGFGGQKFMEETKATMDLYRKYIDENNLKVKMQVDGGIKTTN 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ ++ G D +V GS F K S +++ K
Sbjct: 182 VREVLDLGVDEVVSGSDIF-AKDIKSQILTYHEIFK 216
>gi|327394736|dbj|BAK12158.1| D-allulose-6-phosphate 3-epimerase AlsE [Pantoea ananatis AJ13355]
Length = 231
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/223 (32%), Positives = 119/223 (53%), Gaps = 7/223 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
IQI PS++ + + +++ + A +H D+MDG +V NI+ I +R ++
Sbjct: 4 IQISPSLMCMNLMEIKQQL-AVLNTRADFLHVDIMDGHYVKNITLSPFFIEQIRPHTPVA 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ I +A+AG D I H E+ + R + I ++GKK GV +NP TPV
Sbjct: 63 IDVHLMVEQPTDFIEAVANAGADYICPHAETINRDAFRVINLIRSLGKKPGVVLNPATPV 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
+ + + +D I +MTV+PG+ GQ I + KIR AL +E+DG R
Sbjct: 123 SFIHHYLHLLDKITVMTVDPGYAGQPFIPEMVEKIRALSALKRAHGHHYLIEIDGSCNQR 182
Query: 182 NIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSALAI 223
++L++AGA++L+VG S FN ++S A + ++ S A
Sbjct: 183 TYRTLLEAGAEVLIVGTSGLFNLHDDLSTAWTM--MRDSIDAA 223
>gi|313899821|ref|ZP_07833324.1| D-allulose-6-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312955436|gb|EFR37101.1| D-allulose-6-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 233
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/216 (33%), Positives = 115/216 (53%), Gaps = 7/216 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P PS++ D ++ E+I + A H D+MDG FV NI+ D ++++
Sbjct: 1 MKP--MFSPSLMCMDLLKIREQIQ-VLNLHADFYHIDIMDGHFVKNITLSPDFVKAVARV 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP 119
S DCHLM++ D +I ++A AG ++ H E+ + R L IH +G +TG+ +NP
Sbjct: 58 SRVPLDCHLMVTHPDDYITMLAQAGATFLSPHAETINTDAFRILHKIHELGCRTGIVLNP 117
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
TP++ + + +D I IM+V+PGF GQ I + KI++AKAL + +EVDG
Sbjct: 118 ATPLSYIRHYLHLLDKITIMSVDPGFAGQAFIREMLDKIKEAKALKLQHGYRYLIEVDGS 177
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
+ + L QAG ++ +VG S F + A
Sbjct: 178 CNAATFQELRQAGVEVFIVGNSGLFQLDDNLHAAWE 213
>gi|296205471|ref|XP_002749785.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 3
[Callithrix jacchus]
Length = 199
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAIAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK--------------------- 159
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
AGA+++V GS+ + S L +
Sbjct: 160 ----------AGANMIVSGSAIMRSEDPRSVINLLRN 186
>gi|300781123|ref|ZP_07090977.1| ribulose-phosphate 3-epimerase [Corynebacterium genitalium ATCC
33030]
gi|300532830|gb|EFK53891.1| ribulose-phosphate 3-epimerase [Corynebacterium genitalium ATCC
33030]
Length = 223
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PSILAAD++ LG ++ + A IH D+MDG FVPN+SFG DV +++ +D
Sbjct: 2 IYIAPSILAADYAALGADVEKVPT--ADLIHVDIMDGHFVPNLSFGPDVTKAVNRVTDQF 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+MI + DAG D + FH E++ + + +H +G + G AI P TP+
Sbjct: 60 LDIHMMIEEPERWFETYIDAGGDRLVFHIEATNDHINAAKKLHDLGVEAGFAIKPGTPIE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT----- 179
D ++ + ++IM+V PGFGGQ+ + + K+ + I +S T
Sbjct: 120 PYLDDLEHFEEVMIMSVEPGFGGQKFMPEVLNKVVTLREHIANAGLS-------TIIGID 172
Query: 180 ----SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
IK +AG + V GS+ F ++L L A D
Sbjct: 173 GGIGESTIKQAAEAGVESFVAGSAVFGAHDPAEAVEKLRGLATEARPAD 221
>gi|281203212|gb|EFA77413.1| ribulose phosphate 3-epimerase [Polysphondylium pallidum PN500]
Length = 271
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 17/217 (7%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L+ DF+ L + + + + GA+ FVPN++ GA VI+SLR ++
Sbjct: 9 IICPSLLSGDFAFLARDANYMLEQGAEC--------HFVPNLTIGAPVIKSLRKHTKGHL 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPH------IRRSLRTIHAMGKKTGVAINP 119
DCHLM+++ +S I+ +AG D ITFH E++ + + I + G G+++ P
Sbjct: 61 DCHLMVTNPESMIDDFKNAGADGITFHIEATERGDGRSITKEVIHKIKSSGMMCGISVKP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP+ + D ++ ID +LIMTV PGFGGQ + +PK+ + + ++VDGG+
Sbjct: 121 NTPIESIFDFVESIDFVLIMTVEPGFGGQSFMTHMMPKVETLRK--KYPHLPIQVDGGLD 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLND 215
I + +AGA+++V GSS F + + D
Sbjct: 179 PNTIDAAAKAGANIIVAGSSLFKPGQNPKDTMQLFRD 215
>gi|238894781|ref|YP_002919515.1| allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae NTUH-K2044]
gi|238547097|dbj|BAH63448.1| D-allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 226
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 5/212 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S + PS++ D ++ E+I+ + K A H D+MDG +V NI+ I +L+ +
Sbjct: 2 SAKFSPSLMCMDLTQFKEQITAMNK-KADFYHVDIMDGNYVRNITLSPFFIENLKKITTV 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM++ + I + +AG DII+FHPE ++ I R L I GKK GV +NP TP
Sbjct: 61 PIDVHLMVNHPEDIIPMCLEAGADIISFHPETANNKIFRLLNQIKDAGKKCGVVLNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ + +D + +M+V+PG+ GQ+ I ++ KIR+ + E+DG
Sbjct: 121 AESIAEYAHLLDKVTVMSVDPGYAGQKFIPESLNKIRKLINMRKNNGYRYLTEIDGSCNE 180
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAK 211
+ + ++G D+ +VG S F+ ++S A
Sbjct: 181 KTFGQIAESGVDVFIVGTSGLFSLHEDVSQAW 212
>gi|332209940|ref|XP_003254068.1| PREDICTED: ribulose-phosphate 3-epimerase-like isoform 2 [Nomascus
leucogenys]
gi|332815348|ref|XP_003309498.1| PREDICTED: ribulose-phosphate 3-epimerase [Pan troglodytes]
gi|194381818|dbj|BAG64278.1| unnamed protein product [Homo sapiens]
Length = 199
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 33/217 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK
Sbjct: 121 PGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK--------------------- 159
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
AGA+++V GS+ + S L +
Sbjct: 160 ----------AGANMIVSGSAIMRSEDPRSVINLLRN 186
>gi|284008882|emb|CBA75698.1| ribulose-phosphate 3-epimerase [Arsenophonus nasoniae]
Length = 186
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 85/188 (45%), Positives = 114/188 (60%), Gaps = 5/188 (2%)
Query: 39 MDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
MD +VPN++FG + ++LR Y + D HLM+ +D I A AG ITFH E+S
Sbjct: 1 MDNHYVPNLTFGPMICKALRDYGIKAPIDVHLMVKPVDRLIPDFAKAGATYITFHAEASE 60
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
HI R+L+ I G K G+A NP TP+ L+ VID++DMILIM+VNPGFGGQ I T+ K
Sbjct: 61 HIDRTLQLIKDNGCKAGLAFNPATPLNYLDYVIDKLDMILIMSVNPGFGGQSFIPQTLNK 120
Query: 158 IRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+RQ + +I ++ EVDGGV NI ++ AGAD V GS+ FNQ + +
Sbjct: 121 LRQVRKMIDSNGYNIRLEVDGGVNVNNIINVANAGADTFVAGSAIFNQPDYKTVIDAMR- 179
Query: 216 LKKSALAI 223
KK A AI
Sbjct: 180 -KKLAEAI 186
>gi|167747256|ref|ZP_02419383.1| hypothetical protein ANACAC_01970 [Anaerostipes caccae DSM 14662]
gi|317471001|ref|ZP_07930378.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
gi|167653234|gb|EDR97363.1| hypothetical protein ANACAC_01970 [Anaerostipes caccae DSM 14662]
gi|316901512|gb|EFV23449.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 224
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/223 (31%), Positives = 124/223 (55%), Gaps = 6/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ S++ DF ++GE+++ + H D+MDG + NI+ D+++S + S
Sbjct: 2 KEKFAVSLMCMDFLKVGEQLNILNDW-VGMYHVDIMDGHYCKNITLSPDLVKSFKKVSKL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM ++ + I+ +A+AG DII+ H E+ + R I +G K G+ +NP TP
Sbjct: 61 PLDVHLMTTNPEDWIDPVAEAGADIISLHAETINGQAFRLYNRIEELGLKAGLVLNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ ++ ID++ IMTV+ GF GQ IE + KIR+AK + ++ +++DG +
Sbjct: 121 LSEAAHYLNRIDLLTIMTVDVGFAGQPFIEEMLDKIREAKRIREEKGYHYQIQIDGSCKA 180
Query: 181 RNIKSLVQAGADLLVVGSS-FFN-QKGEISYAKRLNDLKKSAL 221
K L +AGAD+L++GSS F K + ++ + K+AL
Sbjct: 181 STFKKLTEAGADILILGSSGLFGLDKDLKTACAKMTESYKAAL 223
>gi|238063932|ref|ZP_04608641.1| ribulose-phosphate 3-epimerase [Micromonospora sp. ATCC 39149]
gi|237885743|gb|EEP74571.1| ribulose-phosphate 3-epimerase [Micromonospora sp. ATCC 39149]
Length = 226
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 82/225 (36%), Positives = 126/225 (56%), Gaps = 4/225 (1%)
Query: 1 MT-PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
MT P + PSILAADF+RL EE+ + A A +H DVMD FVPN++ G V++SLR+
Sbjct: 1 MTVPPPIVAPSILAADFARLAEEVRAVEGA-ADWLHVDVMDNHFVPNLTIGLPVVQSLRA 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ FD HLMI+ ADAG +TFH E+ + + + A G + G+AI+
Sbjct: 60 ATELPFDVHLMITDPRRWAPGYADAGAYNVTFHAEACDNPVSLAKDLRAAGARAGLAIDR 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGG 177
+TP+ +++ D +LIMT+ GFGGQ+ I + K+R A+ + + +EVDGG
Sbjct: 120 DTPIEPYLELLPSFDTLLIMTIKAGFGGQRFIPELLDKVRAARRHVDAGHLELRIEVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + I+ AGAD V G++ + + + L L + A A
Sbjct: 180 IAADTIEQAAAAGADAFVAGTAVYGAEDPAEAVRCLRGLAERASA 224
>gi|116782817|gb|ABK22672.1| unknown [Picea sitchensis]
Length = 196
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 6/192 (3%)
Query: 36 FDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPES 95
D+MDG FVPN++ GA VI+SLR ++ + DCHLM+++ ++ A AG TFH E+
Sbjct: 1 MDIMDGHFVPNLTIGAPVIQSLRKHTQAFLDCHLMVTNPLDYVEPFAKAGASGFTFHVEA 60
Query: 96 SPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE---IDMILIMTVNPGFGGQQLI 151
+ + + I G + VA+ P T + + +++ ++M+L+MTV PGFGGQ+ +
Sbjct: 61 AEDNWQDLINRIRNAGMRPAVALKPGTSIETVYPLVESKEPVEMVLVMTVEPGFGGQKFM 120
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
T+ K+R + S+ +EVDGG+ I AGA+ +V GSS F K +
Sbjct: 121 PDTMDKVRDLRQ--KYPSLDIEVDGGLGPSTIDQASSAGANCIVAGSSVFGAKDPPAVIA 178
Query: 212 RLNDLKKSALAI 223
L + A I
Sbjct: 179 MLRKSVQEAQKI 190
>gi|288935444|ref|YP_003439503.1| ribulose-phosphate 3-epimerase [Klebsiella variicola At-22]
gi|288890153|gb|ADC58471.1| Ribulose-phosphate 3-epimerase [Klebsiella variicola At-22]
Length = 226
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 5/212 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S + PS++ D ++ E+I+ + K A H D+MDG +V NI+ I +L+ +
Sbjct: 2 SAKFSPSLMCMDLTQFKEQITAMNK-KADFYHVDIMDGNYVRNITLSPFFIENLKKITTV 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM++ + I + +AG DII+FHPE ++ I R L I GK+ GV +NP TP
Sbjct: 61 PIDVHLMVNHPEDIIPMCLEAGADIISFHPETANNKIFRLLNQIKDAGKQCGVVLNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTS 180
+ + +D + +M+V+PG+ GQ+ I ++ KIR+ ++ E+DG +
Sbjct: 121 AESIAEYAHLLDKVTVMSVDPGYAGQKFIPESLNKIRKLISMRKNNGYHYLTEIDGSCNA 180
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAK 211
+ + ++G D+ +VG S F+ ++S A
Sbjct: 181 KTFGQIAESGVDVFIVGTSGLFSLHEDVSQAW 212
>gi|238791613|ref|ZP_04635251.1| D-allulose-6-phosphate 3-epimerase [Yersinia intermedia ATCC 29909]
gi|238729229|gb|EEQ20745.1| D-allulose-6-phosphate 3-epimerase [Yersinia intermedia ATCC 29909]
Length = 219
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ ++ DCHLM++
Sbjct: 1 MDLLKFKEQIEFIDQN-ADYFHIDIMDGHFVPNLTLSPFFVSQVKRIANKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ R + I ++G K G+ +NPET V ++ I +
Sbjct: 60 PQDYIAPLAKAGADFITLHPETLNGQAFRLIEEIRSLGMKVGLILNPETSVDSMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF GQ I + KI + KA K + +E+DG + L++AG
Sbjct: 120 ADKITVMTVDPGFAGQPFIPEMLDKIAELKAWREKNQLNYEIEIDGSCNQATYQLLIEAG 179
Query: 191 ADLLVVGSS-FFNQKGEISYAKRL 213
AD+L+VGSS FN +I A L
Sbjct: 180 ADVLIVGSSGLFNHASDIDKAWAL 203
>gi|89895758|ref|YP_519245.1| hypothetical protein DSY3012 [Desulfitobacterium hafniense Y51]
gi|89335206|dbj|BAE84801.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 218
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ S++ A++ L EI ++ AG H D+MDG FV N + G ++ + +
Sbjct: 1 MKDVLFSASMMCANYGHLETEIRSLETAGIDSFHVDIMDGHFVHNFAMGLYELKYICRTA 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+CHLMI+ ++I+ ADAG D++ HPES ++ I G G+AINP T
Sbjct: 61 KKNVECHLMITDPYNYIDTFADAGVDVVYIHPESEYQPSATIEKIQNAGMIPGIAINPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V + +++ + +L+M VNPG GQ + KI + + + + DG +
Sbjct: 121 SVETITELLKIVGRVLVMCVNPGNAGQIYLPFVHDKICKLLDMQKEYGFEVYWDGHGSVE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
NI+ G V+GS+ KG Y + L++L+
Sbjct: 181 NIRKYAPLGVRGFVLGSATLFGKGR-GYGEILSELRN 216
>gi|325499766|gb|EGC97625.1| allulose-6-phosphate 3-epimerase [Escherichia fergusonii ECD227]
Length = 222
Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats.
Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I+ +A AG + IT HPE+ + R + I +G K G+ +NPETPV ++ I +
Sbjct: 60 PQDYISQLAQAGANFITLHPETINGQAFRLIDEIRRLGMKVGLILNPETPVEAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF GQ I + KI + KA + + +EVDG L+ AG
Sbjct: 120 ADKITVMTVDPGFAGQPFIPEMLNKIAELKAWREREGLHYEIEVDGSCNQATYDRLIAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I+ A ++
Sbjct: 180 ADVFIVGTSGLFNHADNITDAWQV 203
>gi|313639403|gb|EFS04275.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL S4-171]
Length = 222
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 121/215 (56%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + KA K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEKAKVKMLHCDVMDGVFVANTAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + ++ I ++G K +AI+PET +
Sbjct: 63 DVHLATVNPDEFVDLYAAIKPAYMSFHVENSPDVAATISHIRSLGIKPSIAISPETAIEK 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNI 183
+ +DE+DM+L+MTVNPGF GQ+ + KI+Q K + + EVDG + +
Sbjct: 123 IYPFLDEVDMVLMMTVNPGFAGQKFQRHVLEKIQQLKKELENHTNXXXXEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L G D+ VVG++ SY ++L L++
Sbjct: 183 RLLEPIGVDIYVVGTAALFNDKTGSYTEKLAPLRE 217
>gi|325002921|ref|ZP_08124033.1| ribulose-phosphate 3-epimerase [Pseudonocardia sp. P1]
Length = 208
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDII 89
GA +H DVMD FVPN++ G V+ SL + +D DCHLMI + D A+AG +
Sbjct: 11 GADWLHVDVMDAHFVPNLTLGLPVVTSLLASTDLPMDCHLMIENPDHWAIGYAEAGAHNV 70
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ 149
T H E++ + + A G K G+AI P TP+ V+ D +L+M+V PGFGGQ
Sbjct: 71 TVHVEAAEDPVMLAKDLRAAGAKAGLAIKPGTPLEPYFGVLRHYDTLLVMSVEPGFGGQT 130
Query: 150 LIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
I + K+R A+ L+ ++ +E+DGG+ + I + +AG D V GS+ +
Sbjct: 131 FIAEVLDKVRTARTLVDTGHLNLMVEIDGGINAETIGAAAEAGVDCFVAGSAVYAATDPA 190
Query: 208 SYAKRLNDLKKSA 220
+ L + A
Sbjct: 191 LAVEALRSRARDA 203
>gi|149192535|ref|ZP_01870710.1| Pentose-5-phosphate-3-epimerase [Vibrio shilonii AK1]
gi|148833631|gb|EDL50693.1| Pentose-5-phosphate-3-epimerase [Vibrio shilonii AK1]
Length = 225
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 137/217 (63%), Gaps = 4/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ PS++ DFS+L +E++ + KA +H DVMDG FVPN + G + I+++R+ +D +
Sbjct: 3 KFCPSMMCVDFSKLPQELAELEKAKVDMLHIDVMDGHFVPNFALGPEDIKAIRNTTDIEY 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+S+ D +I++ AD G ++ H E+ PH+ R+L I A G K+G+AINP TP+++
Sbjct: 63 DVHLMLSNPDQYIDMFADLGASLMYVHAEAPPHLHRTLGNIQAKGIKSGLAINPGTPLSV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+EDV+D D+IL+M+VNPGF GQ+ I + +I + +I K+ L +DG ++ I
Sbjct: 123 IEDVLDVTDVILVMSVNPGFAGQKFIANAFNRIDRIIDMINKQGTDTKLAIDGAISPEVI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L + ++G++ K SYA+ +++L+ A
Sbjct: 183 DLLKDK-IEYFILGTAGLFGK-PTSYAETMDNLRAIA 217
>gi|76559938|ref|NP_001029075.1| ribulose-phosphate 3-epimerase [Rattus norvegicus]
gi|75516465|gb|AAI01870.1| Ribulose-5-phosphate-3-epimerase [Rattus norvegicus]
Length = 199
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 75/217 (34%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P T V L ++IDM L+MTV PGFGGQ+ +E +PK
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK--------------------- 159
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
AGA+++V GS+ + L +
Sbjct: 160 ----------AGANMIVSGSAIMRSDDPRAVINLLRN 186
>gi|300938234|ref|ZP_07153001.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
gi|300456778|gb|EFK20271.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
Length = 222
Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 60 PQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKMGLILNPETPVEAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AG
Sbjct: 120 ADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I A R+
Sbjct: 180 ADVFIVGTSGLFNHAENIDEAWRI 203
>gi|312984161|ref|ZP_07791507.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus CTV-05]
gi|310894380|gb|EFQ43456.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus CTV-05]
Length = 216
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL A+ L +I N +AG + H D+MDG FVPN+SFG +I+ +
Sbjct: 1 MMIAPSILNANNIDLKNDIENAVQAGISRFHIDIMDGHFVPNLSFGPQLIKDFKREFPMT 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR--RSLRTIHAMGKKTGVAINPET 121
+ HLM + D + AG D++ H E+ + + + G +AI+P+T
Sbjct: 61 DAEIHLMSDAPDKLVPAFVSAGADLVELHYEAMDKPKLYYWFDYLASNGVDAALAISPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV ++E + + +L+MTV PGFGGQ + ++ +I+ + ++G +EVDGG+ +
Sbjct: 121 PVEVVEPYLPLLKQVLVMTVKPGFGGQSFLPESVNRIKSVREIVGS-DFDIEVDGGINDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGA++ VVGS + S +L + K
Sbjct: 180 TIKLAENAGANIFVVGSYLYENGDVGSQVHKLEKIIK 216
>gi|308064308|gb|ADO06195.1| ribulose-phosphate 3-epimerase [Helicobacter pylori Sat464]
Length = 217
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L +EI ++ + A +H DVMDG +VPN++ G V+ + S
Sbjct: 1 MKVAPSLLSADFMHLAKEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLEKVAQISKVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + A II+ H E+ H R L+ I G GV +NP T
Sbjct: 59 LDVHLMVENASFFVGLFAPLNPQIISIHAENEKHPHRVLQLIKNAGITPGVVLNPHTHEE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
L+ +++ + ++L+M+VNPGFGGQ+ ++ + K + K LI + + LEVDGGV +N
Sbjct: 119 SLKYLLESVGLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIKRYNPSCLLEVDGGVNDKN 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I L Q G D++V GS F K + L ++++
Sbjct: 179 IFELQQVGVDVVVSGSYIFKSKDRKLAIEGLQNVRQ 214
>gi|227878878|ref|ZP_03996783.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus JV-V01]
gi|256849786|ref|ZP_05555217.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus MV-1A-US]
gi|262046515|ref|ZP_06019476.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus MV-3A-US]
gi|293380316|ref|ZP_06626390.1| putative ribulose-phosphate 3-epimerase [Lactobacillus crispatus
214-1]
gi|295693188|ref|YP_003601798.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus ST1]
gi|227861512|gb|EEJ69126.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus JV-V01]
gi|256713275|gb|EEU28265.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus MV-1A-US]
gi|260572964|gb|EEX29523.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus MV-3A-US]
gi|290923131|gb|EFE00060.1| putative ribulose-phosphate 3-epimerase [Lactobacillus crispatus
214-1]
gi|295031294|emb|CBL50773.1| Ribulose-phosphate 3-epimerase [Lactobacillus crispatus ST1]
Length = 216
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL A+ L +I N +AG + H D+MDG FVPN+SFG +I+ +
Sbjct: 1 MMIAPSILNANNIDLKNDIENAVQAGISRFHIDIMDGHFVPNLSFGPQLIKDFKREFPMT 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR--RSLRTIHAMGKKTGVAINPET 121
+ HLM + D + AG D++ H E+ + + + G +AI+P+T
Sbjct: 61 DAEIHLMSDAPDKLVPAFVSAGADLVELHYEAMDKPKLYYWFDYLASNGVDAALAISPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV ++E + + +L+MTV PGFGGQ + ++ +I+ + ++G +EVDGG+ +
Sbjct: 121 PVEVVEPYLPLLKQVLVMTVKPGFGGQSFLPESVSRIKSVREIVGS-DFDIEVDGGINDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGA++ VVGS + S +L + K
Sbjct: 180 TIKLAENAGANIFVVGSYLYENGDVGSQVHKLEKIIK 216
>gi|227886876|ref|ZP_04004681.1| allulose-6-phosphate 3-epimerase [Escherichia coli 83972]
gi|300988456|ref|ZP_07178694.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 45-1]
gi|301047696|ref|ZP_07194758.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 185-1]
gi|227836218|gb|EEJ46684.1| allulose-6-phosphate 3-epimerase [Escherichia coli 83972]
gi|300300442|gb|EFJ56827.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 185-1]
gi|300407454|gb|EFJ90992.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 45-1]
gi|315287888|gb|EFU47290.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 110-3]
gi|315293999|gb|EFU53351.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 153-1]
gi|315296099|gb|EFU55408.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 16-3]
gi|324008663|gb|EGB77882.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 57-2]
Length = 222
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 60 PQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPVEAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AG
Sbjct: 120 ADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I A R+
Sbjct: 180 ADVFIVGTSGLFNHAENIDEAWRI 203
>gi|322834182|ref|YP_004214209.1| Ribulose-phosphate 3-epimerase [Rahnella sp. Y9602]
gi|321169383|gb|ADW75082.1| Ribulose-phosphate 3-epimerase [Rahnella sp. Y9602]
Length = 226
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 72/226 (31%), Positives = 120/226 (53%), Gaps = 7/226 (3%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PS++ + +++ + A +H D+MDG +V NI+ I +R ++
Sbjct: 2 EYKISPSLMCMSLIDIKQQLE-VLNRRADMLHIDIMDGHYVKNITLSPFFIEQIRPHTPL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
V D H+M+ + I IA AG D I H E+ + R + I ++GKK GV +NP TP
Sbjct: 61 VLDVHMMVENPADFIEPIALAGADFICPHAETINRDAFRIINQIRSLGKKVGVVLNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V ++ I +D I +MTV+PG+ GQ I + KI Q + L ++ +E+DG
Sbjct: 121 VEYIQHYIHLLDKITVMTVDPGYAGQPFIPEMLGKIAQLRDLKQQKGYRYLIEIDGSCNL 180
Query: 181 RNIKSLVQAGADLLVVGSS-FFNQKGEISYA--KRLNDLKKSALAI 223
R + L+ AGA++L+VGSS F ++ A K L+ ++++ A
Sbjct: 181 RTYQDLMGAGAEVLIVGSSGLFTLDNDLDVAWDKMLDQMRQARHAA 226
>gi|256843392|ref|ZP_05548880.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus 125-2-CHN]
gi|256614812|gb|EEU20013.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus 125-2-CHN]
Length = 216
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL A+ L +I N +AG + H D+MDG FVPN+SFG +I+ +
Sbjct: 1 MMIAPSILNANNIDLKNDIENAVQAGISRFHIDIMDGHFVPNLSFGPQLIKDFKREFPMT 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR--RSLRTIHAMGKKTGVAINPET 121
+ HLM + D + AG D++ H E+ + + + G +AI+P+T
Sbjct: 61 DAEIHLMSDAPDKLVPAFVSAGADLVEIHYEAMDKPKLYYWFDYLASNGVDAALAISPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV ++E + + +L+MTV PGFGGQ + ++ +I+ + ++G +EVDGG+ +
Sbjct: 121 PVEVVEPYLPLLKQVLVMTVKPGFGGQSFLPESVSRIKSVREIVGS-DFDIEVDGGINDQ 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGA++ VVGS + S +L + K
Sbjct: 180 TIKLAENAGANIFVVGSYLYENGDVGSQVHKLEKIIK 216
>gi|300932078|ref|ZP_07147372.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 187-1]
gi|300946676|ref|ZP_07160933.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300957486|ref|ZP_07169698.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 175-1]
gi|301644100|ref|ZP_07244111.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 146-1]
gi|312974113|ref|ZP_07788284.1| ribulose-phosphate 3 epimerase family protein [Escherichia coli
1827-70]
gi|300315796|gb|EFJ65580.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 175-1]
gi|300453655|gb|EFK17275.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300460169|gb|EFK23662.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 187-1]
gi|301077539|gb|EFK92345.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 146-1]
gi|310331647|gb|EFP98903.1| ribulose-phosphate 3 epimerase family protein [Escherichia coli
1827-70]
gi|315617464|gb|EFU98070.1| ribulose-phosphate 3 epimerase family protein [Escherichia coli
3431]
gi|323935495|gb|EGB31828.1| ribulose-phosphate 3-epimerase [Escherichia coli E1520]
gi|323940271|gb|EGB36464.1| ribulose-phosphate 3-epimerase [Escherichia coli E482]
gi|323960399|gb|EGB56035.1| ribulose-phosphate 3-epimerase [Escherichia coli H489]
gi|323969856|gb|EGB65136.1| ribulose-phosphate 3-epimerase [Escherichia coli TA007]
gi|324017183|gb|EGB86402.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 117-3]
Length = 222
Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ + R + I K G+ +NPETPV ++ I +
Sbjct: 60 PQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AG
Sbjct: 120 ADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I A R+
Sbjct: 180 ADVFIVGTSGLFNHAENIDEAWRI 203
>gi|317052964|ref|YP_004119318.1| Ribulose-phosphate 3-epimerase [Pantoea sp. At-9b]
gi|316953291|gb|ADU72762.1| Ribulose-phosphate 3-epimerase [Pantoea sp. At-9b]
Length = 230
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 72/228 (31%), Positives = 119/228 (52%), Gaps = 14/228 (6%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI PS++ + + +++ + A +H D+MDG +V NI+ I +R ++
Sbjct: 4 QISPSLMCMNLMEIKQQL-AVLDTRADFLHIDIMDGHYVKNITLSPFFIEQIRPHTKVAL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ I +IA AG D I H E+ + R + I ++GKK GV +NP TPV+
Sbjct: 63 DVHLMVEEPTDFIEVIAKAGADYICPHAETINRDAFRVINQIRSLGKKVGVVLNPATPVS 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
+ I +D I +MTV+PG+ GQ I + KI + + L + +E+DG R
Sbjct: 123 YIHHYIHLLDKITVMTVDPGYAGQPFITEMVKKIEELRDLKARHGHHYLIEIDGSCNQRT 182
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAK-----RLN----DLKKSA 220
++L++AGA++L+VG S FN + A + +L++SA
Sbjct: 183 YRTLLEAGAEVLIVGTSGLFNLNDNLETAWDQMMGNIEQAKGELRESA 230
>gi|304317167|ref|YP_003852312.1| ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778669|gb|ADL69228.1| Ribulose-phosphate 3-epimerase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 221
Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
PS++ + +L E+IS + + A +H D+MDG FV NI+ I ++SY +
Sbjct: 2 KYLFSPSLMCMNLIKLNEQIS-VLNSKADFLHVDIMDGHFVKNITLSPFFIEQIKSYVNI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + +I I +G IT H E+ + R + I + G G+A+NP TP
Sbjct: 61 PIDAHLMVENPGDYIEICEKSGASFITIHAETINREAFRIIDRIKSHGLMVGIALNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
++ ++ I++ID I IMTV+PGF GQ I + KIR K L + + +E DG
Sbjct: 121 ISEIKHYINKIDKITIMTVDPGFAGQPFIPEVLEKIRDLKRLKDDNNYNYLIEADGSCNK 180
Query: 181 RNIKSLVQAGADLLVVGSS-FFNQKGEISYAKRL 213
+ L AG + V+GSS FN ++ A +
Sbjct: 181 NTFQVLKDAGCKVFVLGSSGLFNLSDDLGKAWEI 214
>gi|293569448|ref|ZP_06680741.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1071]
gi|291587842|gb|EFF19697.1| ribulose-phosphate 3-epimerase [Enterococcus faecium E1071]
Length = 219
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 3/206 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS++ D + ++I + A H DVMDG FVPN D ++ +R ++
Sbjct: 3 KLGPSLMCTDLGNVEQDIKELDNAAVDFYHIDVMDGVFVPNFGLNIDFVKRVREITEKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ +I+ A+AG D+I+ H E++ +++ L I A G K GVAINP T + +
Sbjct: 63 DVHLMVTDPSRYIDTFAEAGADMISIHAEATTNLQGDLARIQAHGLKAGVAINPATSLDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNI 183
LE V D D +++MTVNPGF GQ+ I + KI++ I KR + +E VDG + I
Sbjct: 123 LEYVYDVTDYVVVMTVNPGFAGQKFIPAIYDKIQELSDQIKKRGLKIEIQVDGNIGENTI 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEIS 208
GA + + G S+ +N G +
Sbjct: 183 PKCKDNGATMYIGGSSAVYNSAGTLE 208
>gi|325830780|ref|ZP_08164164.1| ribulose-phosphate 3-epimerase [Eggerthella sp. HGA1]
gi|325487187|gb|EGC89630.1| ribulose-phosphate 3-epimerase [Eggerthella sp. HGA1]
Length = 235
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 80/205 (39%), Positives = 119/205 (58%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++I PSIL+ADF LG +I I KAGA +H DVMDG FVPN++ G V++ L+
Sbjct: 1 MFEPVKIAPSILSADFMHLGRDIELIEKAGAGYVHVDVMDGHFVPNLTMGVPVVKQLKKA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAIN 118
+ D HLMI++ + DAG D +T H E+ + + R++ IHA G K V++
Sbjct: 61 TSLPLDVHLMIANPLEQLPWFLDAGADSVTVHAEALDADGLARAVAAIHAAGAKAAVSVK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P T V L V+ ++DM+L+M+V PGF GQ IE + K+ + + S ++VDG
Sbjct: 121 PRTAVGALAPVLADLDMVLVMSVEPGFSGQSYIEGSEAKVARIAEMARAVGASPLIQVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFF 201
G+ + AGAD+LV G++ F
Sbjct: 181 GIGEVTAPIVAAAGADVLVCGNAVF 205
>gi|309795898|ref|ZP_07690312.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 145-7]
gi|308120559|gb|EFO57821.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 145-7]
gi|323162144|gb|EFZ48010.1| ribulose-phosphate 3 epimerase family protein [Escherichia coli
E128010]
Length = 222
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ + R + I K G+ +NPETPV ++ I +
Sbjct: 60 PQDYIAQLARAGADFITLHPETINGQAFRLIDEIRCHDMKVGLILNPETPVEAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AG
Sbjct: 120 ADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I A R+
Sbjct: 180 ADVFIVGTSGLFNHAENIDEAWRI 203
>gi|259501634|ref|ZP_05744536.1| ribulose-phosphate 3-epimerase [Lactobacillus iners DSM 13335]
gi|259166919|gb|EEW51414.1| ribulose-phosphate 3-epimerase [Lactobacillus iners DSM 13335]
Length = 230
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 15 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDME 74
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 75 IEIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 134
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ + E+DGG+
Sbjct: 135 KIVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVT 194
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD++V GS F +L
Sbjct: 195 ANKVKVAGADIVVAGSYIFKHGMIKDQIDKLK 226
>gi|227893313|ref|ZP_04011118.1| possible ribulose-phosphate 3-epimerase [Lactobacillus ultunensis
DSM 16047]
gi|227864893|gb|EEJ72314.1| possible ribulose-phosphate 3-epimerase [Lactobacillus ultunensis
DSM 16047]
Length = 215
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 121/218 (55%), Gaps = 8/218 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD L I +AG + H D+MDG FVPN+SFG +I+ +
Sbjct: 1 MIIAPSILNADNLNLEANIKEAVEAGISRFHIDIMDGHFVPNLSFGPQLIKDFKREFPMT 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPET 121
+ HLM ++ D + DAG D I H ES + L + + G +AINP+T
Sbjct: 61 EAEIHLMSNNPDDLVPAFVDAGADSIELHYESMNESQLNYWLDYLASNGVSANLAINPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V ++E + +I +LIM+V+PGFGGQ I T +I++ + ++ + +EVDGG+ R
Sbjct: 121 QVEVIEKFLTKIKQVLIMSVHPGFGGQSFITKTTERIQKTRDIVD--DMPIEVDGGINDR 178
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
IK AGAD+ VVGS + + S AK+++ L+K+
Sbjct: 179 TIKMARDAGADVFVVGSYLY---EDGSIAKQVHKLEKA 213
>gi|300811393|ref|ZP_07091889.1| ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497628|gb|EFK32654.1| ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 216
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/217 (33%), Positives = 120/217 (55%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
+ I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 1 MIIAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM +++ + AG D+I H E+ I L + G G+ ++P+T
Sbjct: 61 TAEVHLMSNNLPDLLPAFVKAGSDLIEIHYEADYPNRIDHWLDYLKENGVSCGLVLSPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +LE D++D +L+MTV PGFGGQ+ +E +IR A+A++ + +EVDGG+ ++
Sbjct: 121 DIKVLERYKDKLDQVLLMTVYPGFGGQKFMEEAADRIRAARAIL--PDLPIEVDGGINAQ 178
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGAD+ V GS F + + L + +
Sbjct: 179 TAEIAKEAGADVFVAGSYIFGRDSVANQVAELTSILE 215
>gi|332295281|ref|YP_004437204.1| Ribulose-phosphate 3-epimerase [Thermodesulfobium narugense DSM
14796]
gi|332178384|gb|AEE14073.1| Ribulose-phosphate 3-epimerase [Thermodesulfobium narugense DSM
14796]
Length = 208
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/207 (32%), Positives = 102/207 (49%), Gaps = 2/207 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+ADF I + A H DVMDG +VPNISFG L S
Sbjct: 1 MLISGSILSADFLNFERNIRELEP-YADAWHVDVMDGHYVPNISFGPQFAAYLAKCSKLP 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+ + ++++ + +TFH E++ R + M G++I P +
Sbjct: 60 VSVHLMVKEPEKFVSLVPKTVRE-VTFHQEATVAPVRFCAMLREMNFLPGISIGPGVHES 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ +V+ + +L M+V PGFGGQ IE KI++ L R+ + VDGGV +
Sbjct: 119 SILEVLPFVHHVLFMSVEPGFGGQSFIEPVFEKIKRLVKLCPDRNFEIWVDGGVDMFWGE 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAK 211
L + G DL+V+GS+FF K + K
Sbjct: 179 KLKEIGTDLVVMGSAFFKAKDPGEFGK 205
>gi|257791098|ref|YP_003181704.1| ribulose-phosphate 3-epimerase [Eggerthella lenta DSM 2243]
gi|317488178|ref|ZP_07946750.1| ribulose-phosphate 3-epimerase [Eggerthella sp. 1_3_56FAA]
gi|257474995|gb|ACV55315.1| ribulose-phosphate 3-epimerase [Eggerthella lenta DSM 2243]
gi|316912723|gb|EFV34260.1| ribulose-phosphate 3-epimerase [Eggerthella sp. 1_3_56FAA]
Length = 235
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 80/205 (39%), Positives = 119/205 (58%), Gaps = 4/205 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++I PSIL+ADF LG +I I KAGA +H DVMDG FVPN++ G V++ L+
Sbjct: 1 MFEPVKIAPSILSADFMHLGRDIELIEKAGAGYVHVDVMDGHFVPNLTMGVPVVKQLKKA 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAIN 118
+ D HLMI++ + DAG D +T H E+ + + R++ IHA G K V++
Sbjct: 61 TSLPLDVHLMIANPLEQLPWFLDAGADSVTVHAEALDADGLARAVAAIHAAGAKAAVSVK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P T V L V+ ++DM+L+M+V PGF GQ IE + K+ + + S ++VDG
Sbjct: 121 PRTAVGALAPVLADLDMVLVMSVEPGFSGQSYIEGSEAKVTRITEMARAVGASPLIQVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFF 201
G+ + AGAD+LV G++ F
Sbjct: 181 GIGEVTAPIVAAAGADVLVCGNAVF 205
>gi|116513645|ref|YP_812551.1| Pentose-5-phosphate-3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116092960|gb|ABJ58113.1| ribulose-5-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325125295|gb|ADY84625.1| Ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 216
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
+ I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 1 MIIAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM +++ + AG D I H E+ I L + G G+ ++P+T
Sbjct: 61 TAEVHLMSNNLPDLLPAFVKAGSDFIEIHYEADYPNRIDHWLDYLKENGVSCGLVLSPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +LE D++D +L+MTV PGFGGQ+ +E +I+ A+A++ + +EVDGG+ ++
Sbjct: 121 DIKVLERYKDKLDQVLLMTVYPGFGGQKFMEEAAARIKAARAIL--PDLPIEVDGGINAQ 178
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGAD+ V GS F + L + +
Sbjct: 179 TAEIAKEAGADVFVAGSYIFGRDSVAKQVAELTSILE 215
>gi|294623447|ref|ZP_06702301.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
gi|291597142|gb|EFF28339.1| ribulose-phosphate 3-epimerase [Enterococcus faecium U0317]
Length = 219
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 114/206 (55%), Gaps = 3/206 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ PS++ D + ++I + A H DVMDG FVPN D ++ +R ++
Sbjct: 3 KLGPSLMCTDLGNVEQDIKELDNAAVDFYHIDVMDGVFVPNFGLNLDFVKRVREITEKPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM++ +I+ A+AG D+I+ H E++ +++ L I A G K GVAINP T + +
Sbjct: 63 DVHLMVTDPSRYIDTFAEAGADMISIHAEATTNLQGDLARIQAHGLKAGVAINPATSLDV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--VDGGVTSRNI 183
LE V D D +++MTVNPGF GQ+ I + KI++ I KR + +E VDG + I
Sbjct: 123 LEYVYDVTDYVVVMTVNPGFAGQKFIPAIYDKIQELSDQIKKRRLKIEIQVDGNIGENTI 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEIS 208
GA + + G S+ +N G +
Sbjct: 183 PKCKDNGATMYIGGSSAVYNSAGTLE 208
>gi|157147981|ref|YP_001455300.1| allulose-6-phosphate 3-epimerase [Citrobacter koseri ATCC BAA-895]
gi|157085186|gb|ABV14864.1| hypothetical protein CKO_03788 [Citrobacter koseri ATCC BAA-895]
Length = 222
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 60 PQDYIGQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPVEAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D + +MTV+PGF GQ I + KI + KA + + +EVDG K L+ AG
Sbjct: 120 ADKVTVMTVDPGFAGQPFIPEMLDKIAELKAWREREGLHYEIEVDGSCNQATYKKLMAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I A ++
Sbjct: 180 ADVFIVGTSGLFNHAENIDDAWQV 203
>gi|51893476|ref|YP_076167.1| ribulose-5-phosphate 3-epimerase [Symbiobacterium thermophilum IAM
14863]
gi|51857165|dbj|BAD41323.1| ribulose-5-phosphate 3-epimerase [Symbiobacterium thermophilum IAM
14863]
Length = 213
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 3/207 (1%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMI 71
+ A F L E++ + AG H DVMDG FVPN G I + +++ D HLMI
Sbjct: 1 MCAHFGNLAHEVAELEAAGIDMFHLDVMDGRFVPNFGMGLQDIEFIAAHATKPADVHLMI 60
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+++ A G +I HPE+ H R+L I G G+AINP TPV +E ++
Sbjct: 61 EDPGNYVEKFAKLGIKVIYTHPEADYHPARTLLKIADAGAAPGIAINPGTPVEAIEPLLH 120
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+L+MTVNPGF GQ + K+ + L + + +DG T+ ++ L G
Sbjct: 121 LAQYVLVMTVNPGFAGQPYLSFVDEKVDRLAELKERYGYRIVIDGACTAAVVERLAPRGV 180
Query: 192 DLLVVGS-SFFNQKGEISYAKRLNDLK 217
D V+G+ F + Y + + +L+
Sbjct: 181 DGFVLGTKGLFGRGKP--YGEVIAELR 205
>gi|325912970|ref|ZP_08175343.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners UPII
60-B]
gi|325477650|gb|EGC80789.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners UPII
60-B]
Length = 216
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 1 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDME 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 61 IEIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ + E+DGG+
Sbjct: 121 KIVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD++V GS F +L
Sbjct: 181 ANKVKTAGADIVVAGSYIFKHGMIKDQIDKLK 212
>gi|313900355|ref|ZP_07833849.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312954904|gb|EFR36578.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 214
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 75/214 (35%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS++ A ++ L EE+ + +AG H D+MDG FVPNIS G ++++R+ + +
Sbjct: 1 MILCPSMMCASYANLEEEVRALEEAGTDIFHCDIMDGSFVPNISMGLMDVKAVRALTKKM 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLMI I+ DAG D+I HPES P ++L I + GK +G+A+NP+T ++
Sbjct: 61 VDVHLMIDHPADKIDWFLDAGADLIYIHPESEPQAMKTLMYIRSRGKLSGLAVNPDTSLS 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+++++ D +LIM+V PGF GQ I+S KIR+ A + +DG + I+
Sbjct: 121 AVKELLPHCDYLLIMSVFPGFAGQTFIDSVDTKIRELIACKKMYGYRIILDGACSPAVIQ 180
Query: 185 SLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK 217
D V+G S+ F+ +G SY + +N L+
Sbjct: 181 EYHALSVDGFVLGTSALFHGEG--SYVENMNLLR 212
>gi|323190032|gb|EFZ75310.1| ribulose-phosphate 3-epimerase [Escherichia coli RN587/1]
Length = 222
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DNHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 60 PQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHGMKVGLILNPETPVDAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AG
Sbjct: 120 ADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQVTYEKLMAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I A R+
Sbjct: 180 ADVFIVGTSGLFNHAENIDEAWRI 203
>gi|309804783|ref|ZP_07698847.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LactinV 09V1-c]
gi|312873261|ref|ZP_07733317.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF 2052A-d]
gi|308165893|gb|EFO68112.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LactinV 09V1-c]
gi|311091272|gb|EFQ49660.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF 2052A-d]
Length = 216
Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 1 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCISRDFPDME 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C I+ FH E++ I + + + G K +AINP+TPV
Sbjct: 61 IEIHLMSNNLPVMLPLFANLSCAILEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
L +D+ID +L+M+V PGFGGQ+ I KI K ++ + + E+DGG+
Sbjct: 121 KLVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANQGYVIPLEIDGGINDVT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD++V GS F +L
Sbjct: 181 ANKVKTAGADIVVAGSYIFKHGMIKDQIDKLK 212
>gi|149006682|ref|ZP_01830368.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae SP18-BS74]
gi|169834465|ref|YP_001695011.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|225859373|ref|YP_002740883.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae 70585]
gi|225861447|ref|YP_002742956.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298229884|ref|ZP_06963565.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255070|ref|ZP_06978656.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307127826|ref|YP_003879857.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
670-6B]
gi|147761597|gb|EDK68561.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae SP18-BS74]
gi|168996967|gb|ACA37579.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
Hungary19A-6]
gi|225720406|gb|ACO16260.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae 70585]
gi|225727564|gb|ACO23415.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
Taiwan19F-14]
gi|306484888|gb|ADM91757.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
670-6B]
gi|327389800|gb|EGE88145.1| putative ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
GA04375]
gi|332072785|gb|EGI83266.1| ribulose-phosphate 3 epimerase family protein [Streptococcus
pneumoniae GA17545]
gi|332073951|gb|EGI84429.1| ribulose-phosphate 3 epimerase family protein [Streptococcus
pneumoniae GA41301]
gi|332200175|gb|EGJ14248.1| ribulose-phosphate 3 epimerase family protein [Streptococcus
pneumoniae GA47368]
Length = 231
Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 6/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I+ PS++ D + E+I+ + A H D+MDG FVPNI+ I+ ++
Sbjct: 1 MSR-IEFSPSLMTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNITLSPWFIQEVQKI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINP 119
SD+ HLM++ ++ + D C+ I H E + R + IH G K GV +NP
Sbjct: 59 SDTPLSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNP 118
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
ETPV+ + ID +D + IMTV+PGF GQ+ +EST+ KI++ + L + +E+DG
Sbjct: 119 ETPVSTIFPYIDLLDKVTIMTVDPGFAGQRFLESTLYKIQELRQLRVQNGYHYIIEMDGS 178
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ + K + AG D+ V+G S F +I+ A +
Sbjct: 179 SSRKTFKQIDVAGPDIYVIGRSGLFGLDDDIAKAWDI 215
>gi|256383798|gb|ACU78368.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384628|gb|ACU79197.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. capri
str. GM12]
Length = 225
Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++
Sbjct: 1 MKKYIIAPSVLSANFMELKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNI 60
Query: 62 DSVFDCHLMIS----SIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTG 114
D D H M+S + + A +++T H ES I + +
Sbjct: 61 DINVDVHFMVSVKTKQFEDFFSDYIKAKPEMMTMHIESLKDDNTINKFIDLCKQNNILAS 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--L 172
+AI+P+T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI+ L ++ +
Sbjct: 121 LAISPKTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFISSSLEKIQILDQLRNTKNYKYTI 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
EVDGG+ + + QAG D++V GS F AK L
Sbjct: 181 EVDGGINEQTSVLVKQAGVDMIVAGSYLFGSDDFTKRAKGL 221
>gi|167768255|ref|ZP_02440308.1| hypothetical protein CLOSS21_02811 [Clostridium sp. SS2/1]
gi|167709779|gb|EDS20358.1| hypothetical protein CLOSS21_02811 [Clostridium sp. SS2/1]
Length = 231
Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 5/212 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
QI S++ DF ++ E++ + ++ H D+MDG F NI+ D+I+S + S
Sbjct: 11 QIAVSLMCMDFLKIKEQLEVLNES-VGMYHIDIMDGHFCKNITLSPDLIKSFKKVSKLPM 69
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM + + I +A+AG DII+ H E+ + R I +G K G+ +NP T +
Sbjct: 70 DVHLMTTEPNDWIETVAEAGADIISVHAETINGDAYRIYNEIERLGCKRGLVLNPATTLE 129
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
++ ++ +D++ IMTV+ GF GQ IE + KI +AK L + +++DG +
Sbjct: 130 SVKHYLNRVDLLTIMTVDVGFSGQPFIEEMLDKIAEAKKLREENGYHYKIQIDGSCNPKT 189
Query: 183 IKSLVQAGADLLVV-GSSFFNQKGEISYAKRL 213
K L +AGAD+ ++ GS F+ +I A +
Sbjct: 190 FKRLKEAGADIYILGGSGLFSIDSDIHKAVEI 221
>gi|256961967|ref|ZP_05566138.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|257089843|ref|ZP_05584204.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis CH188]
gi|293383038|ref|ZP_06628956.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|293389474|ref|ZP_06633931.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|312903264|ref|ZP_07762444.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0635]
gi|312907492|ref|ZP_07766483.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|312910110|ref|ZP_07768957.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
gi|256952463|gb|EEU69095.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Merz96]
gi|256998655|gb|EEU85175.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis CH188]
gi|291079703|gb|EFE17067.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis R712]
gi|291081091|gb|EFE18054.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis S613]
gi|310626520|gb|EFQ09803.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 512]
gi|310633140|gb|EFQ16423.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0635]
gi|311289383|gb|EFQ67939.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
DAPTO 516]
gi|315577576|gb|EFU89767.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0630]
Length = 229
Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|256958940|ref|ZP_05563111.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DS5]
gi|257078971|ref|ZP_05573332.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis JH1]
gi|294779110|ref|ZP_06744521.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
PC1.1]
gi|307271060|ref|ZP_07552343.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX4248]
gi|256949436|gb|EEU66068.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis DS5]
gi|256987001|gb|EEU74303.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis JH1]
gi|294453835|gb|EFG22226.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
PC1.1]
gi|306512558|gb|EFM81207.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX4248]
gi|315033926|gb|EFT45858.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0017]
gi|315036936|gb|EFT48868.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0027]
gi|323480683|gb|ADX80122.1| ribulose-phosphate 3 epimerase family protein [Enterococcus
faecalis 62]
Length = 229
Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I+ LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIKELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|307289062|ref|ZP_07569018.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0109]
gi|306499771|gb|EFM69132.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0109]
Length = 238
Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I+ LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIKELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|312874626|ref|ZP_07734650.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF 2053A-b]
gi|315653697|ref|ZP_07906617.1| ribulose-phosphate 3-epimerase [Lactobacillus iners ATCC 55195]
gi|325911702|ref|ZP_08174109.1| ribulose-phosphate 3-epimerase [Lactobacillus iners UPII 143-D]
gi|311089856|gb|EFQ48276.1| ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF 2053A-b]
gi|315489059|gb|EFU78701.1| ribulose-phosphate 3-epimerase [Lactobacillus iners ATCC 55195]
gi|325476468|gb|EGC79627.1| ribulose-phosphate 3-epimerase [Lactobacillus iners UPII 143-D]
Length = 216
Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 1 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDME 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 61 IEIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ + + E+DGG+
Sbjct: 121 KIVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANQGYVIPLEIDGGINDVT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD++V GS F +L
Sbjct: 181 ANKVKTAGADIVVAGSYIFKHGMIKDQIDKLK 212
>gi|331703256|ref|YP_004399943.1| Ribulose phosphate 3 epimerase [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|328801811|emb|CBW53964.1| Ribulose phosphate 3 epimerase [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 225
Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++
Sbjct: 1 MKKYIIAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNI 60
Query: 62 DSVFDCHLMIS----SIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTG 114
D D H M+S + + A +++T H ES I + +
Sbjct: 61 DINVDVHFMVSVKTKQFEEFFSDYIKAKPEMMTMHIESLKDDNTINKFIDLCKQNNILAS 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--L 172
+AI+P+T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI+ L ++ +
Sbjct: 121 LAISPKTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFISSSLEKIQILDQLRNTKNYKYTI 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
EVDGG+ + + QAG D++V GS F AK L
Sbjct: 181 EVDGGINEQTSVLVKQAGVDMIVAGSYLFGSDDFTKRAKGL 221
>gi|300994970|ref|ZP_07180994.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 200-1]
gi|300304867|gb|EFJ59387.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 200-1]
gi|324015794|gb|EGB85013.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 60-1]
Length = 222
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLASKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ + R + I G K G+ +NPETPV ++ I +
Sbjct: 60 PQDYIAQLARAGADFITLHPETINGQAFRLIDEICRHGMKVGLILNPETPVEAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF GQ I + K+ + KA + + +EVDG + L+ AG
Sbjct: 120 ADKITVMTVDPGFAGQPFIPEMLDKVAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I A R+
Sbjct: 180 ADVFIVGTSGLFNHAENIDEAWRI 203
>gi|302191159|ref|ZP_07267413.1| ribulose-phosphate 3-epimerase [Lactobacillus iners AB-1]
gi|309806264|ref|ZP_07700277.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 03V1-b]
gi|312871615|ref|ZP_07731707.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF
3008A-a]
gi|312871912|ref|ZP_07731994.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF
2062A-h1]
gi|308167248|gb|EFO69414.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 03V1-b]
gi|311092489|gb|EFQ50851.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF
2062A-h1]
gi|311092840|gb|EFQ51192.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners LEAF
3008A-a]
Length = 216
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 1 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDME 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 61 IEIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ + E+DGG+
Sbjct: 121 KIVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD++V GS F +L
Sbjct: 181 ANKVKVAGADIVVAGSYIFKHGMIKDQIDKLK 212
>gi|309809941|ref|ZP_07703789.1| ribulose-phosphate 3-epimerase [Lactobacillus iners SPIN 2503V10-D]
gi|308169729|gb|EFO71774.1| ribulose-phosphate 3-epimerase [Lactobacillus iners SPIN 2503V10-D]
Length = 216
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 1 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDME 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C I+ FH E++ I + + + G K +AINP+TPV
Sbjct: 61 IEIHLMSNNLPVMLPLFANLSCAILEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
+ +D+ID +L+M+V PGFGGQ+ I KI K ++ + + E+DGG+
Sbjct: 121 KIVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANQGYVIPLEIDGGINDVT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD++V GS F +L
Sbjct: 181 ANKVKTAGADIVVAGSYIFKHGMIKDQIDKLK 212
>gi|300860858|ref|ZP_07106945.1| D-allulose-6-phosphate 3-epimerase [Enterococcus faecalis TUSoD
Ef11]
gi|300849897|gb|EFK77647.1| D-allulose-6-phosphate 3-epimerase [Enterococcus faecalis TUSoD
Ef11]
gi|315144459|gb|EFT88475.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX2141]
gi|315160488|gb|EFU04505.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0645]
Length = 229
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|315163972|gb|EFU07989.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1302]
Length = 238
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|257085225|ref|ZP_05579586.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Fly1]
gi|256993255|gb|EEU80557.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis Fly1]
Length = 229
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++S +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKSYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWRM 215
>gi|104773651|ref|YP_618631.1| ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103422732|emb|CAI97361.1| Ribulose-phosphate 3-epimerase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 216
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 5/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
+ I PSIL AD LG++I +G ++ H DVMDG FVPN+S+G ++ + + D
Sbjct: 1 MIIAPSILNADNLHLGQQIQEAADSGIRRFHIDVMDGHFVPNLSYGPQLVSDFKKQFPDL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM +++ + AG D I H E+ I L + G G+ ++P+T
Sbjct: 61 TAEVHLMSNNLPDLLPAFVKAGSDFIEIHYEADYPNLIAHWLDYLKENGVSCGLVLSPDT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +LE D++D +L+MTV PGFGGQ+ +E +I+ A+A++ + +EVDGG+ ++
Sbjct: 121 DIKVLERYKDKLDQVLLMTVYPGFGGQKFMEEAAARIKAARAIL--PDLPIEVDGGINAQ 178
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +AGAD+ V GS F + L + +
Sbjct: 179 TAEIAKEAGADVFVAGSYIFGRDSVAKQVAELTSILE 215
>gi|301800439|emb|CBW33073.1| Ribulose-6-phosphate epimerase [Streptococcus pneumoniae OXC141]
Length = 248
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I+ PS++ D + E+I+ + A H D+MDG FVPNI+ I+ ++
Sbjct: 18 MSR-IEFSPSLMTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNITLSPWFIQEVQKI 75
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINP 119
SD+ HLM++ ++ + D C+ I H E + R + IH G K GV +NP
Sbjct: 76 SDTPLSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNP 135
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
ETPV+ + ID +D IMTV+PGF GQ+ +EST+ KI++ + L + +E+DG
Sbjct: 136 ETPVSTIFPYIDLLDKATIMTVDPGFAGQRFLESTLYKIQELRQLRVQNGYHYIIEMDGS 195
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ + K + AG D+ V+G S F +I+ A +
Sbjct: 196 SSRKTFKQIDVAGPDIYVIGRSGLFGLDDDIAKAWDI 232
>gi|194211275|ref|XP_001488267.2| PREDICTED: similar to Ribulose-phosphate 3-epimerase
(Ribulose-5-phosphate-3-epimerase) [Equus caballus]
Length = 278
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Query: 42 CFVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI 99
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 92 HFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENP 151
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR 159
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 152 GALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVH 211
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ S+ +EVDGGV I +AGA+++V GS+ + S L
Sbjct: 212 WLRTQF--PSLDIEVDGGVGPDTIHKCAEAGANMIVSGSAIMRSEDPRSVISLLRS 265
>gi|83319580|ref|YP_424246.1| ribulose-phosphate 3-epimerase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283466|gb|ABC01398.1| ribulose-phosphate 3-epimerase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 225
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 9/221 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++
Sbjct: 1 MKKYIIAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNI 60
Query: 62 DSVFDCHLMI----SSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTG 114
D D H M+ + A +++T H ES I + +
Sbjct: 61 DINVDVHFMVNVKTKQFEDFFLDYIKAKPEMMTMHIESLKDNSTINKFINLCKQNNILAS 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--L 172
+AI+P T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI L ++ +
Sbjct: 121 LAISPNTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFITSSLKKIEILDQLRKEKKYKYTI 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
EVDGG+ + + QAG D++V GS F AK L
Sbjct: 181 EVDGGINEQTSVLVKQAGVDMIVAGSYLFGSDDFTKRAKGL 221
>gi|313665197|ref|YP_004047068.1| ribulose-phosphate 3-epimerase [Mycoplasma leachii PG50]
gi|312949523|gb|ADR24119.1| putative ribulose-phosphate 3-epimerase [Mycoplasma leachii PG50]
Length = 225
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 9/221 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++
Sbjct: 1 MKKYIIAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNI 60
Query: 62 DSVFDCHLMI----SSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTG 114
D D H M+ + A +++T H ES I + +
Sbjct: 61 DINVDVHFMVNVKTKQFEDFFLDYIKAKPEMMTMHIESLKDNNTINKFIDLCKQNNILAS 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--L 172
+AI+P T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI L ++ +
Sbjct: 121 LAISPNTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFITSSLKKIEILDQLRKEKKYKYTI 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
EVDGG+ + + QAG D++V GS F AK L
Sbjct: 181 EVDGGINEQTSVLVKQAGVDMIVAGSYLFGSDDFTKRAKGL 221
>gi|300906411|ref|ZP_07124109.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 84-1]
gi|301302780|ref|ZP_07208909.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 124-1]
gi|300401859|gb|EFJ85397.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 84-1]
gi|300842000|gb|EFK69760.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 124-1]
gi|315253767|gb|EFU33735.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 85-1]
Length = 222
Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 5/204 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E+I I + A H D+MDG FVPN++ + ++ + DCHLM++
Sbjct: 1 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTR 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+I +A AG D IT HPE+ + R + I K G+ +NPETPV ++ I +
Sbjct: 60 PQDYIAQLARAGADFITLHPETINGQAFRLIDEIRCHDMKVGLILNPETPVEAMKYYIHK 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
D I +MTV+PGF Q I + K+ + KA + + +EVDG + L+ AG
Sbjct: 120 ADKITVMTVDPGFARQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ +VG S FN I A R+
Sbjct: 180 ADVFIVGTSGLFNHAENIDEAWRI 203
>gi|72549079|ref|XP_843473.1| ribulose-phosphate 3-epimerase [Leishmania major strain Friedlin]
gi|323363990|emb|CBZ12996.1| putative ribulose-phosphate 3-epimerase [Leishmania major strain
Friedlin]
Length = 253
Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 6 QIVPSILAADFSRL-GEEISNITKAG--AKQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PS++ AD ++L E + ++ G A +H D++DG PN SF + LR +
Sbjct: 26 IISPSLMVADQTKLLQESLDVLSDKGGSADWLHVDIVDGHLAPNFSFCPATVSDLRKHLP 85
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ DCHL++ + ++ A AG FH E++ + R + G G+A+ P T
Sbjct: 86 NTFLDCHLVVCNPIRWVDSFAKAGASTFVFHYEATENPVAVCRKVREAGMVAGIALAPNT 145
Query: 122 PVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P +L +ID E+DM L+M V GF GQQ T+ K+R+ + + ++VDG +T
Sbjct: 146 PAEVLFPIIDAGEVDMALVMCVPIGFAGQQFQMETVEKVRRMRQRY--PHLLIQVDGSIT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + AGA+ +V G + F + L
Sbjct: 204 LDTIDLVAAAGANAIVPGRAAFKSNDRKGSMEGLR 238
>gi|261327892|emb|CBH10869.1| ribulose-phosphate 3-epimerase putative [Trypanosoma brucei
gambiense DAL972]
Length = 247
Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 68/215 (31%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
Query: 6 QIVPSILAADFSRLGEEISNI---TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PS++ AD ++L + ++ + +H DV+DG F PN+SF D + LR +
Sbjct: 24 IISPSLMVADPTQLLLDSLHVLSPEGGAVEWLHVDVIDGHFAPNMSFCPDTVVGLRRHLP 83
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM++ + + A+AG TFH E++ R I A+G + G+AI+P T
Sbjct: 84 RAFLDIHLMVTEPEKWVRPFANAGASQFTFHLEAANDAMMLAREIRAVGMQVGIAISPHT 143
Query: 122 PVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ L +ID +DM+L+MTV PGF GQ+ +E + K++Q + + ++++VDG +
Sbjct: 144 AIDALIPLIDGGFMDMVLVMTVVPGFAGQKFMEGPLEKVKQLRERYPQ--LNIQVDGSIN 201
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + AGA+ LV G + F K +L
Sbjct: 202 LDTVNVVAAAGANCLVPGQAVFKAKDRRENVNKLR 236
>gi|229550058|ref|ZP_04438783.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 29200]
gi|255972837|ref|ZP_05423423.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T1]
gi|257422660|ref|ZP_05599650.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis X98]
gi|312951450|ref|ZP_07770347.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0102]
gi|229304762|gb|EEN70758.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis ATCC 29200]
gi|255963855|gb|EET96331.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T1]
gi|257164484|gb|EEU94444.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis X98]
gi|310630606|gb|EFQ13889.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0102]
gi|315152526|gb|EFT96542.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0031]
gi|315155804|gb|EFT99820.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0043]
gi|315158029|gb|EFU02046.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0312]
Length = 229
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|329921057|ref|ZP_08277580.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners SPIN
1401G]
gi|328934964|gb|EGG31453.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners SPIN
1401G]
Length = 216
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 74/212 (34%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 1 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDME 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 61 IEIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
L +D+ID +L+M+V PGFGGQ+ I KI K ++ + E+DGG+
Sbjct: 121 KLVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ GAD++V GS F +L
Sbjct: 181 ANKVKAVGADIVVAGSYIFKHGMIKEQIDKLK 212
>gi|225857237|ref|YP_002738748.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae P1031]
gi|225725667|gb|ACO21519.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae P1031]
Length = 231
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 72/217 (33%), Positives = 118/217 (54%), Gaps = 6/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I+ PS++ D + E+I+ + A H D+MDG FVPNI+ I+ ++
Sbjct: 1 MSR-IEFSPSLMTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNITLSPWFIQEVQKI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINP 119
SD+ HLM++ ++ + D C+ I H E + R + IH G K GV +NP
Sbjct: 59 SDTPLSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNP 118
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
ETPV+ + ID +D + IMTV+PGF GQ+ ++ST+ KI++ + L + +E+DG
Sbjct: 119 ETPVSTIFPYIDLLDKVTIMTVDPGFAGQRFLKSTLYKIQELRQLRVQNGYHYIIEMDGS 178
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ + K + AG D+ V+G S F +I+ A +
Sbjct: 179 SSRKTFKQIDVAGPDIYVIGRSGLFGLDDDIAKAWDI 215
>gi|315150579|gb|EFT94595.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0012]
gi|315172354|gb|EFU16371.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1346]
Length = 229
Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH KTG+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKTGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|312900717|ref|ZP_07760014.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0470]
gi|311292198|gb|EFQ70754.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0470]
gi|315169079|gb|EFU13096.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1341]
gi|327535090|gb|AEA93924.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis OG1RF]
Length = 229
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWKM 215
>gi|42560853|ref|NP_975304.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|42492350|emb|CAE76946.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|301321082|gb|ADK69725.1| putative ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 225
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PS+L+A+F L E+ K IH+DVMD FVPN++FG+ ++ ++
Sbjct: 1 MKKYIIAPSVLSANFMDLKNELELCKKNNINWIHYDVMDFDFVPNLTFGSKILHDIKKNI 60
Query: 62 DSVFDCHLMIS----SIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---HAMGKKTG 114
D D H M+S + + A +++T H ES ++ I
Sbjct: 61 DINVDVHFMVSVKTKQFEDFFSDYIKAKPEMMTMHIESLKDNNTIIKFIDLCKKNNILAS 120
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--L 172
+AI+P+T V+++ +D++D +L+M+V PGFGGQ+ I S++ KI+ L ++ +
Sbjct: 121 LAISPKTDVSLVYPYLDKLDNVLVMSVEPGFGGQKFISSSLEKIQILDQLRKEKKYKYII 180
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
EVDGG+ + + QAG D++V GS F AK L
Sbjct: 181 EVDGGINEQTSVLVKQAGVDMIVAGSYLFGSGDFTKRAKGL 221
>gi|257419256|ref|ZP_05596250.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T11]
gi|257161084|gb|EEU91044.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T11]
Length = 229
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++S +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKSYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|309807748|ref|ZP_07701682.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 01V1-a]
gi|308169008|gb|EFO71092.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 01V1-a]
Length = 216
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 1 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDME 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C I+ FH E++ I + + + G K +AINP+TPV
Sbjct: 61 IEIHLMSNNLPVMLPLFANLSCAILEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
L +D+ID +L+M+V PGFGGQ+ I KI K ++ + E+DGG+
Sbjct: 121 KLVPFLDKIDQVLLMSVQPGFGGQKFRNEVIDKIVFLKKMMANHGYVIPLEIDGGINDVT 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ GAD++V GS F +L
Sbjct: 181 ANKVKAVGADIVVAGSYIFKHGMIKEQIDKLK 212
>gi|229545866|ref|ZP_04434591.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|256853083|ref|ZP_05558453.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T8]
gi|307292038|ref|ZP_07571907.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0411]
gi|229309021|gb|EEN75008.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis TX1322]
gi|256711542|gb|EEU26580.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis T8]
gi|306497036|gb|EFM66584.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0411]
gi|315029427|gb|EFT41359.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX4000]
Length = 229
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 108/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVPQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFSYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A R+
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLNEDIEKAWRM 215
>gi|26325066|dbj|BAC26287.1| unnamed protein product [Mus musculus]
Length = 242
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Query: 41 GCFVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 45 MHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATEN 104
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 105 PGALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV 164
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++ +EVDGGV ++ +AGA+++V GS+ + L +
Sbjct: 165 HWLRTQF--PTLDIEVDGGVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRN 219
>gi|261369066|ref|ZP_05981949.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
gi|282568791|gb|EFB74326.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
Length = 215
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 2/208 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++ SILAADF+ L ++ AG H DVMDG FVP ISFG ++R++ +
Sbjct: 2 FELCASILAADFANLERDMRAANAAGVDAFHIDVMDGHFVPAISFGTGMVRTMERLTTKP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ + + + G ++ H E +LR I A G + G+ +NPETPV
Sbjct: 62 LDVHLMVEKPLDFLPELEELGVKRVSVHYEIPGGPEAALRAICAAGMQAGLVLNPETPVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +I +L+MTV+PG GGQ + + KI AK+L+ + + ++VDGG+T
Sbjct: 122 SALPYLAQISQLLLMTVHPGRGGQVYLPGSNEKIAAAKSLLQGQGSNTVIQVDGGITPGT 181
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ GA +V GS+ F K + +
Sbjct: 182 LPGAYATGARSIVAGSAVFGGKIDENVK 209
>gi|253741907|gb|EES98766.1| Ribulose-phosphate 3-epimerase [Giardia intestinalis ATCC 50581]
Length = 241
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 115/236 (48%), Gaps = 25/236 (10%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVF 65
I PSIL+ADFS+LG+E + GA +H DVMDG FVPN++ G VI SL + +
Sbjct: 4 IAPSILSADFSKLGQEAQEVLSYGADWLHVDVMDGSFVPNLTIGPPVISSLHAALPHAFL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES---------------------SPHIRRSLR 104
DCH M + + A AG TFH E+ + +
Sbjct: 64 DCHFMTKDPEFWLPATAKAGASTFTFHIEAPSVRSGRSTPYIEPDEDMATITAACVALVT 123
Query: 105 TIHAMGKKTGVAINPETPVAIL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I + G K G++I P+TPV+++ ++++ +D++L+MTV PGFGGQ+ I K Q +
Sbjct: 124 KIKSYGLKAGLSIKPKTPVSVISDELLKSLDLVLLMTVEPGFGGQKYIPEAAEKAVQLRK 183
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G + +EVDGG++ I G D+ V GS F L +S
Sbjct: 184 RRG--DLLIEVDGGISDATIGHACSCGIDVFVAGSYIFGASDRSVPISLLRKHMES 237
>gi|15901453|ref|NP_346057.1| allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae TIGR4]
gi|111657168|ref|ZP_01407946.1| hypothetical protein SpneT_02001611 [Streptococcus pneumoniae
TIGR4]
gi|148984049|ref|ZP_01817344.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae SP3-BS71]
gi|168486880|ref|ZP_02711388.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|168487297|ref|ZP_02711805.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|168487581|ref|ZP_02712089.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|14973105|gb|AAK75697.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae TIGR4]
gi|147923338|gb|EDK74451.1| ribulose-phosphate 3-epimerase family protein [Streptococcus
pneumoniae SP3-BS71]
gi|183569611|gb|EDT90139.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|183569833|gb|EDT90361.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
gi|183570217|gb|EDT90745.1| D-allulose-6-phosphate 3-epimerase [Streptococcus pneumoniae
CDC1087-00]
Length = 231
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+ I+ PS++ D + E+I+ + A H D+MDG FVPNI+ I+ ++
Sbjct: 1 MSR-IEFSPSLMTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNITLSPWFIQEVQKI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINP 119
SD+ HLM++ ++ + D C+ I H E + R + IH G K GV +NP
Sbjct: 59 SDTPLSVHLMVTDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNP 118
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
ETPV+ + ID +D IMTV+PGF GQ+ +EST+ KI++ + L + +E+DG
Sbjct: 119 ETPVSTIFPYIDLLDKATIMTVDPGFAGQRFLESTLYKIQELRQLRVQNGYHYIIEMDGS 178
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ + K + AG D+ V+G S F +I+ A +
Sbjct: 179 SSRKTFKQIDVAGPDIYVIGRSGLFGLDDDIAKAWDI 215
>gi|161507724|ref|YP_001577685.1| ribulose-phosphate 3-epimerase [Lactobacillus helveticus DPC 4571]
gi|160348713|gb|ABX27387.1| Ribulose-phosphate 3-epimerase [Lactobacillus helveticus DPC 4571]
Length = 216
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD L E I G + H D+MDG FVPN+SFG +I + +
Sbjct: 1 MIIAPSILNADNLNLKENIKEAVAVGIDRFHIDIMDGHFVPNLSFGPQLISDFKREFPMI 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPET 121
+ H M ++ D I AG DI+ H + + L + + G + +AI P+
Sbjct: 61 DAEIHFMSNNPDDLIPAFVAAGADIMELHYGAMSESKLNYWLDYLASNGVEAVLAIKPDV 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
++E + +I +L+MTVNPGFGGQ I + KI+Q + ++G ++ +EVDGG+ R
Sbjct: 121 QADVIEKFLPKIKQVLVMTVNPGFGGQSFIADSAEKIKQVREIVG-PNMPIEVDGGINER 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGAD+ VVGS + + ++L + K
Sbjct: 180 TIKIAKDAGADVFVVGSYLYKNGNITNQVRKLEKIIK 216
>gi|256965165|ref|ZP_05569336.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HIP11704]
gi|257086786|ref|ZP_05581147.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis D6]
gi|307273267|ref|ZP_07554513.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0855]
gi|256955661|gb|EEU72293.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis HIP11704]
gi|256994816|gb|EEU82118.1| ribulose-phosphate 3-epimerase [Enterococcus faecalis D6]
gi|306510252|gb|EFM79276.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX0855]
gi|315027309|gb|EFT39241.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX2137]
gi|315169684|gb|EFU13701.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1342]
Length = 229
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH KTG+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKTGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|322503189|emb|CBZ38273.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 253
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 8/215 (3%)
Query: 6 QIVPSILAADFSRL-GEEISNITKAG--AKQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PS++ AD ++L E + ++ G A +H D++DG PN SF + LR +
Sbjct: 26 IISPSLMVADQTKLLQESLDVLSDKGGSADWLHVDIVDGHLAPNFSFSPATVSDLRMHLP 85
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ DCHL++ ++ A AG FH E++ + R + G G+A+ P T
Sbjct: 86 NTFLDCHLIVRDPIRWVDSFAKAGTSTFVFHYEATENPVAVCRKVREAGMVAGIALAPNT 145
Query: 122 PVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P +L +ID E+DM L+M V G GQ+ T+ K+RQ + + ++VDG +T
Sbjct: 146 PAEVLFPIIDAGEVDMALVMCVQIGLAGQRFQIETVEKVRQLRQRY--PHLLIQVDGSIT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + AGA+ +V G + F +RL
Sbjct: 204 LDTIDLVAAAGANAIVPGRAAFKSNDRKGSMERLR 238
>gi|307275004|ref|ZP_07556167.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX2134]
gi|306508452|gb|EFM77559.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX2134]
Length = 229
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D ++ ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLNKFKQQITFLNDHVASY-HIDIMDGRYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ + I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESIFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|311070117|ref|YP_003975040.1| allulose-6-phosphate 3-epimerase [Bacillus atrophaeus 1942]
gi|310870634|gb|ADP34109.1| allulose-6-phosphate 3-epimerase [Bacillus atrophaeus 1942]
Length = 232
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 5/212 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
Q PS++ D ++ E+IS I + A H D+MDG FV NI+ I LR ++
Sbjct: 2 KYQFSPSLMCMDLTKFNEQIS-ILNSRADMYHVDIMDGHFVKNITLSPFFISQLRMMTNL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + I++ A+AG D I+ H E+ + + R +R I G K G+ +NP TP
Sbjct: 61 PIDAHLMVEKPEDFIDMTAEAGADYISVHAETINRNAFRLIRKIKDYGAKVGIVLNPATP 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTS 180
+ + + ID + IMTV+PGF GQ I KIR AK + + +EVDG
Sbjct: 121 LDWISPYVHLIDKLTIMTVDPGFAGQPFIAEMTEKIRDAKKIRETNHYTYVIEVDGSCNE 180
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAK 211
+ ++L +AG D+ ++G S F+ A
Sbjct: 181 KTFRTLAEAGNDIFIIGNSGLFDLDENTEIAW 212
>gi|227485548|ref|ZP_03915864.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
gi|227236414|gb|EEI86429.1| ribulose-phosphate 3-epimerase [Anaerococcus lactolyticus ATCC
51172]
Length = 216
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 120/216 (55%), Gaps = 1/216 (0%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+I+I PS++ A+F L +E+ ++ KAGA H D+MDG FVPN G I ++R +
Sbjct: 1 MSNIKICPSLMCANFDNLKKEVVSLDKAGADIFHIDIMDGNFVPNFGMGLQDIDTVRRNT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM + HI + AG DI+ H E I +L I G K G+A++P T
Sbjct: 61 NKEIDVHLMSINASDHIGLFKKAGVDIVYVHSEGDSLISTTLAKIKENGMKVGLAVSPGT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ ++++++ +D++L+MTVNPGF GQ+ ++ KI + L K + + VDG ++
Sbjct: 121 SIYSIKELLNLVDIVLVMTVNPGFAGQKYLDYVDEKIFKLADLKSKYNFEIFVDGAISEE 180
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ L G D ++G+S K E SY + + LK
Sbjct: 181 KVNYLKTKGVDGFILGTSALFGKDE-SYEEIIKRLK 215
>gi|146101688|ref|XP_001469176.1| ribulose-phosphate 3-epimerase [Leishmania infantum]
gi|134073545|emb|CAM72278.1| putative ribulose-phosphate 3-epimerase [Leishmania infantum JPCM5]
Length = 253
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 8/215 (3%)
Query: 6 QIVPSILAADFSRL-GEEISNITKAG--AKQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PS++ AD ++L E + ++ G A +H D++DG PN SF + LR +
Sbjct: 26 IISPSLMVADQTKLLQESLDVLSDKGGSADWLHVDIVDGHLAPNFSFSPATVSDLRMHLP 85
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
++ DCHL++ ++ A AG FH E++ + R + G G+A+ P T
Sbjct: 86 NTFLDCHLIVRDPIRWVDSFAKAGASTFVFHYEATENPVAVCRKVREAGMVAGIALAPNT 145
Query: 122 PVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P +L +ID E+DM L+M V G GQ+ T+ K+RQ + + ++VDG +T
Sbjct: 146 PAEVLFPIIDAGEVDMALVMCVQIGLAGQRFQIETVEKVRQLRQRY--PHLLIQVDGSIT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + AGA+ +V G + F +RL
Sbjct: 204 LDTIDLVAAAGANAIVPGRAAFKSNDRKGSMERLR 238
>gi|188592991|emb|CAQ55499.1| ribulose-phosphate 3-epimerase, putative [Trypanosoma brucei
TREU927]
Length = 247
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/215 (31%), Positives = 114/215 (53%), Gaps = 8/215 (3%)
Query: 6 QIVPSILAADFSRLGEEISNI---TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PS++ AD ++L + ++ + +H DV+DG F PN+SF D + LR +
Sbjct: 24 IISPSLMVADPTQLLLDSLHVLSPEGGAVEWLHVDVIDGHFAPNMSFCPDTVVGLRRHLP 83
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM++ + + A+AG TFH E++ R I A+G + G+AI+P T
Sbjct: 84 RAFLDIHLMVTEPEKWVRPFANAGASQFTFHLEAANDAMVLAREIRAVGMQVGIAISPHT 143
Query: 122 PVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ L +ID +DM+L+MTV PGF GQ+ +E + K++Q + ++++VDG +
Sbjct: 144 AIDALIPLIDGGFMDMVLVMTVVPGFAGQKFMEGPLEKVKQLRERY--PHLNIQVDGSIN 201
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + AGA+ LV G + F K +L
Sbjct: 202 LDTVNVVAAAGANCLVPGQAVFKAKDRRENVNKLR 236
>gi|313900917|ref|ZP_07834407.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312954337|gb|EFR36015.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 221
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 5/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSI+ + K +HFD+MDG +V N+ G + + ++ S
Sbjct: 3 IKISPSIMCCKVEEYKPYLELFEKVQLDSVHFDIMDGAYVKNVMLGTPIYKDIKRLSKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M + ++ D I+FHPE++ + L+TI G K G+ +NP TPV+
Sbjct: 63 VDVHIMSYRPEEYMEYYDIQPGDRISFHPETTAQPYKLLQTIRDKGCKAGLVLNPGTPVS 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
LE+ +D +D + +MTVNPGF GQ+++ KIR+ + L+ ++ I + VDG T N
Sbjct: 123 YLEECMDLLDYVTLMTVNPGFAGQKMVPDAPQKIRRVRQLLDAYEKEIDIVVDGNTTIEN 182
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEIS--YAKRLNDLKK 218
+ + AGA+ VVG SS Y + +L+K
Sbjct: 183 SRLMRDAGANAFVVGTSSIIRSLDTFEEMYNAYVQELEK 221
>gi|213421519|ref|ZP_03354585.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 181
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Query: 46 NISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR 104
N++ G V++SLR Y + D HLM+ +D + A AG IITFHPE+S H+ R+L+
Sbjct: 1 NLTIGPMVLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQ 60
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
I G K G+ NP T ++ L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ +
Sbjct: 61 LIKEHGCKAGLVFNPATSLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRR 120
Query: 165 IGKRSISL--EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + EVDGGV NI + AGAD+ V GS+ F + Y K +++++
Sbjct: 121 IDASGYDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIF---DKPDYKKVIDEMR 172
>gi|150015419|ref|YP_001307673.1| ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
gi|149901884|gb|ABR32717.1| Ribulose-phosphate 3-epimerase [Clostridium beijerinckii NCIMB
8052]
Length = 235
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 119/217 (54%), Gaps = 6/217 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS++ AD L + I I K G IH D++DG F P++ G D ++SLR +D
Sbjct: 6 IIISPSVMCADLCNLEKSIREIEKEGIDTIHIDLIDGYFSPSMPLGIDTVKSLRKITDMN 65
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD H+M ++ + I + G I+FH ESS HI R + I G K G+A+NP T ++
Sbjct: 66 FDVHIMSNNNEFFIQEMIKIGVSQISFHYESSTHIDRYINLIKKNGIKAGLALNPSTSLS 125
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTI---PKIRQAKALIGKRSI--SLEVDGGVT 179
+LE + + D I++M +NPGF + + I K++ LI + +EVDG V+
Sbjct: 126 VLEYCLPQCDTIMLMLINPGFATDKNEKQVIYAEKKVKDLYKLIKGNGLNTKIEVDGRVS 185
Query: 180 SRNIKSLVQAGADLLVVGS-SFFNQKGEISYAKRLND 215
I LV+AGAD+LV GS S F I+ K L +
Sbjct: 186 LDTIPGLVKAGADMLVAGSTSLFIPNQSIAENKALME 222
>gi|291300086|ref|YP_003511364.1| ribulose-phosphate 3-epimerase [Stackebrandtia nassauensis DSM
44728]
gi|290569306|gb|ADD42271.1| ribulose-phosphate 3-epimerase [Stackebrandtia nassauensis DSM
44728]
Length = 219
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 77/214 (35%), Positives = 119/214 (55%), Gaps = 3/214 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+LAADF+RL E S +++ A +H DVMD FVPN++ G V++SL++ +D
Sbjct: 1 MIAPSLLAADFARLAEACSAVSE-DADWLHVDVMDNHFVPNLTIGTPVVKSLKAATDLPL 59
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
DCHLMI+ A+ G ++FH E+ R + A G K G+AI+ +T +
Sbjct: 60 DCHLMITDPKRWAVGYAELGAYNVSFHAEACDDPVGLARDLRAAGTKAGLAIDRDTLIEP 119
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRNI 183
D++ E D +LIMT+ GFGGQ + + K+R A+ + G + +EVDGG+ I
Sbjct: 120 YLDMLPEFDTLLIMTIKAGFGGQAFMPELLDKVRTARNAVESGHLELRIEVDGGIADDTI 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ +AGAD V G++ + + +RL L
Sbjct: 180 AAAAEAGADAFVAGTAVYGAADPAAAIQRLRALA 213
>gi|313884605|ref|ZP_07818366.1| putative ribulose-phosphate 3-epimerase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620389|gb|EFR31817.1| putative ribulose-phosphate 3-epimerase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 220
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++V SI+ AD +G+E+ + +AG +H DVMDG FV N++ G I SL +
Sbjct: 3 KLVASIMTADQMNIGKEVQDCLEAGIDWLHCDVMDGVFVDNLAMGPYQIESLLKVEELTL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + + +I + ITFH E+ + + + I + G K G+AI+P+T
Sbjct: 63 DIHLATVTPERYIKLFGPLKPHYITFHIETVANPQACIDLIRSYGCKVGLAISPQTSFKA 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSRN 182
+ +D+ID++L+MTVNPGF GQQ + K++ I + +EVDG + +
Sbjct: 123 VIPYMDQIDLLLVMTVNPGFAGQQFNMDVLDKLKLITEYIDTHELKHILIEVDGNIYEKT 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I+ + DL V+G+S + SY ++ + L++
Sbjct: 183 IELMKDFKVDLYVLGTSALFKDDGKSYLEKADTLRE 218
>gi|295112955|emb|CBL31592.1| Pentose-5-phosphate-3-epimerase [Enterococcus sp. 7L76]
Length = 229
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+ I+ +D I IMTV+PGF GQ+ IE T+ KI + L ++ +E+DG
Sbjct: 122 IESTFPYIELLDKITIMTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ K + AG D+ +VG S F +I A ++
Sbjct: 182 NSFKRIDAAGPDIYIVGRSGLFGLDEDIEKAWKM 215
>gi|311272996|ref|XP_003133680.1| PREDICTED: ribulose-phosphate 3-epimerase-like [Sus scrofa]
Length = 287
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Query: 42 CFVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI 99
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 101 HFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENP 160
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR 159
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 161 GALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVH 220
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ S+ +EVDGGV I +AGA+++V GS+ + S L +
Sbjct: 221 WLRTQF--PSLDIEVDGGVGPDTIHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 274
>gi|257063707|ref|YP_003143379.1| ribulose-phosphate 3-epimerase [Slackia heliotrinireducens DSM
20476]
gi|256791360|gb|ACV22030.1| ribulose-phosphate 3-epimerase [Slackia heliotrinireducens DSM
20476]
Length = 231
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 74/228 (32%), Positives = 118/228 (51%), Gaps = 9/228 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL+ADF + ++I I + GA IH DVMDG FVPN++ G + L+
Sbjct: 1 MFTEPKIAPSILSADFMNMEKDIREIEEGGAAFIHVDVMDGHFVPNLTLGVPFVAGLKRI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHP----ESSPHIRRSLRTIHAMGKKTGVA 116
++ D HLMIS+ + + D +T H E++ + +++ IH G K +A
Sbjct: 61 ANIPLDVHLMISNPLEQLPWYLEHQPDFVTVHFESLDEAAGEVDKAVDMIHDAGCKAAIA 120
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+ P+ V +L I +++M+LIM+V PGF GQ IE + ++ A+ + + +EV
Sbjct: 121 LKPDCDVEVLRPYISKLEMVLIMSVYPGFSGQSYIEGSDQRVAAVAAMAREAGVDPLIEV 180
Query: 175 DGG--VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
DGG V + + AGAD+LV GS F + + + A
Sbjct: 181 DGGLSVNDPT-RLVAAAGADVLVAGSGCFKAADRGAAIQAIKATAAKA 227
>gi|57168587|ref|ZP_00367720.1| ribulose-phosphate 3-epimerase [Campylobacter coli RM2228]
gi|57020092|gb|EAL56769.1| ribulose-phosphate 3-epimerase [Campylobacter coli RM2228]
Length = 181
Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 5/181 (2%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
MDG FVPN++FG VI + + ++ D HLM+ + +++ I+FH ES H
Sbjct: 1 MDGHFVPNLTFGPCVIEKISTITEIPLDVHLMVKDVGKFVDLFIPIKPKFISFHIESEAH 60
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
R I + G + +NP TP+ ++ +ID +DM+L+M+VNPGFGGQ+ + KI
Sbjct: 61 PIRLCEYIRSQGIHPAIVLNPHTPINSIKHMIDFVDMVLLMSVNPGFGGQKFLPLVYDKI 120
Query: 159 RQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ + LI +++ +EVDGGV N L AGAD+LV GS F+ Y ++ L
Sbjct: 121 KELRRLIDEKNAKVFIEVDGGVNGLNASDLEAAGADILVAGSYIFSSND---YKTSISSL 177
Query: 217 K 217
K
Sbjct: 178 K 178
>gi|260101416|ref|ZP_05751653.1| ribulose-phosphate 3-epimerase [Lactobacillus helveticus DSM 20075]
gi|260084756|gb|EEW68876.1| ribulose-phosphate 3-epimerase [Lactobacillus helveticus DSM 20075]
Length = 216
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD L E I G + H D+MDG FVPN+SFG +I + +
Sbjct: 1 MIIAPSILNADNLNLKENIKEAVAVGIDRFHIDIMDGHFVPNLSFGPQLISDFKREFPMI 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPET 121
+ H M ++ D I AG DI+ H + + L + + G +T +AI P+
Sbjct: 61 DAEIHFMSNNPDDLIPAFVAAGADIMELHYGAMSESKLNYWLDYLASNGVETVLAIKPDV 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
++E + +I +L+MTVNPGFGGQ I + KI+Q + ++G ++ +EVDGG+ R
Sbjct: 121 QADVIEKFLPKIKQVLVMTVNPGFGGQSFIADSAEKIKQVREIVG-PNMPIEVDGGINDR 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGAD+ VVGS + + ++L + K
Sbjct: 180 TIKIAKDAGADVFVVGSYLYKNGNITNQVRKLEKIIK 216
>gi|145352180|ref|XP_001420433.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580667|gb|ABO98726.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 204
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 15/206 (7%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS---DSVFDCHLMISSIDSHINIIA 82
+ GA +H D+MDG FVPN++ G V+ L D+ FDCHL +S+ + + +A
Sbjct: 1 MLDEGADWLHVDIMDGHFVPNLTIGPPVVADLAKRVGPRDAFFDCHLSVSNPATLVPALA 60
Query: 83 DAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVAI---LEDVID--EIDM 135
AG +TFH E S +TI ++G + VA P TP + +++D +DM
Sbjct: 61 AAGASSVTFHIEVVSGTAAEELCKTIRSLGMRAAVACKPSTPCDEDGGVYELVDAGLVDM 120
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+L ++V PGFGGQ+ + K+ +A + +++DGGV + +AGA++LV
Sbjct: 121 VLCLSVEPGFGGQKFNPAVCDKVSALRARY--PDLDIQMDGGVNPSTAELCARAGANVLV 178
Query: 196 VGSSFFNQKGEISYAKRLNDLKKSAL 221
GS+ F A+ ++ L++S L
Sbjct: 179 AGSAVFGAANP---AQVISQLRQSIL 201
>gi|170085067|ref|XP_001873757.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651309|gb|EDR15549.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 193
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 108/189 (57%), Gaps = 4/189 (2%)
Query: 36 FDVMDGCFVPNISFGADVIRSLRSYSD-SVFDCHLMISSIDSHINIIADAGCDIITFHPE 94
DVMDG FVPNI+ GA ++ + DCH+M++ + ++ IADAG + FH E
Sbjct: 1 LDVMDGHFVPNITMGAPILSCVHKGVPGIFMDCHMMVAKPEQWVDDIADAGGSLYCFHIE 60
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVAIL-EDVIDEIDMILIMTVNPGFGGQQLIES 153
++ + TIH K GVAI+P+TP + +++ + DM+L+MTV PG GGQ+ IE
Sbjct: 61 ATSDPVSLINTIHKRNMKAGVAISPDTPSTAITDEIANAADMLLVMTVYPGRGGQKFIER 120
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+PK+ + +A ++ +EVDGGV I AG +++V G++ F + + +RL
Sbjct: 121 CVPKVAELRARFPEK--DIEVDGGVGPNTIGICADAGCNVIVAGTAIFGSENPMEVIQRL 178
Query: 214 NDLKKSALA 222
D +A A
Sbjct: 179 KDTVNAAQA 187
>gi|323466290|gb|ADX69977.1| Ribulose-phosphate 3-epimerase [Lactobacillus helveticus H10]
Length = 216
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 112/217 (51%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD L E I G + H D+MDG FVPN+SFG +I +
Sbjct: 1 MIIAPSILNADNLNLKENIKEAVAVGIDRFHIDIMDGHFVPNLSFGPQLISDFKREFPMT 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPET 121
+ H M ++ D I AG DI+ H + + L + + G + +AI P+
Sbjct: 61 DAEIHFMSNNPDDLIPAFVAAGADIMELHYGAMSESKLNYWLDYLASNGVEAVLAIKPDV 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
++E + +I +L+MTVNPGFGGQ I + KI+Q + ++G ++ +EVDGG+ R
Sbjct: 121 QADVIEKFLPKIKQVLVMTVNPGFGGQSFIADSAEKIKQVREIVG-PNMPIEVDGGINDR 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGAD+ VVGS + + ++L + K
Sbjct: 180 TIKIAKDAGADVFVVGSYLYENGNITNQVRKLEKIIK 216
>gi|325568993|ref|ZP_08145286.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
gi|325158031|gb|EGC70187.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus ATCC
12755]
Length = 230
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 5/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + E+I+ + H D+MDG +VPNIS I+ +R S
Sbjct: 3 KVEFSPSLMTMDLDKFKEQITFLNDQ-VDSYHIDIMDGHYVPNISLSPWFIQEVRKISTL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM++ + + D C+ I H E + R + IH G K G+ +NPETP
Sbjct: 62 PLSAHLMVTEPAFWVQQLIDINCEWICMHAEVLDGLAFRLIDQIHDAGLKAGIVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V+++ ID +D + IMTV+PGF GQ+ IE + KI + + L + +E+DG
Sbjct: 122 VSVILPYIDRLDKVTIMTVDPGFTGQRFIEGALDKIVELRELREEYDYHYVIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
++ K + +A D+ +VG S F +I+ A +
Sbjct: 182 KSFKRIDEANPDIYIVGRSGLFGLDDDIAKAWSI 215
>gi|310830042|ref|YP_003962399.1| Ribulose-phosphate 3 epimerase family protein [Eubacterium limosum
KIST612]
gi|308741776|gb|ADO39436.1| Ribulose-phosphate 3 epimerase family protein [Eubacterium limosum
KIST612]
Length = 215
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ SILA D +R+GE+I AG IH D+MDG +V N+++G ++R L+ S
Sbjct: 4 VSASILACDQTRIGEQIIKAEAAGIDYIHVDIMDGVYVENMTYGPQLVRDLKKISGLPVS 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H + ++ I AD G DI+TF ++ + ++ I G K G+ I P L
Sbjct: 64 VHFEVCHPETFFPIFADCGADIVTFQLDACANPLHLIQEIRKRGIKAGIGIGPTYGTERL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIK 184
++ ID +++M+ PG+GGQ L K+R+A+ ++ K + + VDGGV N +
Sbjct: 124 AYLLPCIDWLIMMSAEPGYGGQPLNPCIYEKLREAQEIMAKTGSRVPVSVDGGVNGSNGQ 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
LV+AGAD+L+ GS F + L +L
Sbjct: 184 GLVEAGADVLIAGSYVFQDDAVEERVQNLKNL 215
>gi|325261357|ref|ZP_08128095.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
gi|324032811|gb|EGB94088.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
Length = 222
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 4/220 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS++ + +L E + + + +H D+MDG +VPN + G D ++ LR +D
Sbjct: 3 KISPSMMCVEIDKLNEYLKIFEEEKIEYLHIDIMDGEYVPNYTLGTDYVKQLRKATDIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLMI+S + I + + H ES+ H++++L+ I A G K+ VAINP T V
Sbjct: 63 DVHLMINSPERKIEWFDFQEGEYVAVHAESTQHLQKALQAIRAAGAKSMVAINPSTRVED 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRN 182
L+ V+D++D +L+MTVNPGF GQ+ I TI KI + + R I +EVDG V+
Sbjct: 123 LQYVLDDMDGLLVMTVNPGFAGQKAIPQTIQKIEDCRNYLDARGYQHIEIEVDGNVSYEL 182
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + AD+ V GSS F G + + +++ A
Sbjct: 183 AGEMSKKHADIFVAGSSSF-MNGIDGMKEGIRRMRRVIDA 221
>gi|71421786|ref|XP_811905.1| ribulose-phosphate 3-epimerase [Trypanosoma cruzi strain CL Brener]
gi|70876622|gb|EAN90054.1| ribulose-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 247
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 6 QIVPSILAADFSRLGEEISNI---TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PSI+ AD ++L E ++ + +H DV+DG F PN+SF +D + LR +
Sbjct: 24 IISPSIMVADPTQLLLEALHVLSPEGGAVEWLHVDVIDGHFAPNMSFCSDTVAGLRRHLP 83
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM++ + + ADAG TFH E++ I G + GVAI+P T
Sbjct: 84 HVFLDVHLMVAEPEKWVRPFADAGASQFTFHIEATQEPVALASKIREAGMQVGVAISPRT 143
Query: 122 PVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ L +I+ +DM L+MTV PGF GQ+ + + K+RQ + ++++VDG +
Sbjct: 144 AIDGLIPLIENGHLDMALVMTVEPGFAGQKFLSGPLAKVRQLRGRY--PHLNIQVDGSIN 201
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGA+ LV G + F K L
Sbjct: 202 LDTVNEAALAGANCLVPGQAVFKAKNRQENVIHLR 236
>gi|76788708|ref|YP_330358.1| allulose-6-phosphate 3-epimerase [Streptococcus agalactiae A909]
gi|77406734|ref|ZP_00783772.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae H36B]
gi|77411625|ref|ZP_00787966.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae CJB111]
gi|76563765|gb|ABA46349.1| D-allulose-6-phosphate 3-epimerase [Streptococcus agalactiae A909]
gi|77162342|gb|EAO73312.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae CJB111]
gi|77174665|gb|EAO77496.1| ribulose-phosphate 3-epimerase [Streptococcus agalactiae H36B]
Length = 229
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++I PS++ + + EEI + + H D+MDG FVPNI+ + +R S
Sbjct: 1 MQKVEISPSLMCMNLDKFQEEICFL-DSHVDSYHIDIMDGHFVPNITLSPWFVEEVRKLS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPE 120
HLM+ + + D C+ I H E + R + IH G K GV +NPE
Sbjct: 60 SLPMSAHLMVKDQPFWVQQMIDIKCEWICMHAEVINGLAFRLIDQIHNEGLKAGVVLNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ ++ I+ +D + IMTV+PGF GQ+ ++ST+ KI + L + + + +E+DG
Sbjct: 120 TPIEVIMPYIELLDKVTIMTVDPGFAGQRFLDSTLDKIVDLRRLREENNYNYLIEMDGSS 179
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ + K + +AG D+ +VG S F IS + +
Sbjct: 180 SRKTFKKIDEAGPDIYIVGRSGLFALTDNISESWDI 215
>gi|238894745|ref|YP_002919479.1| allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae NTUH-K2044]
gi|238547061|dbj|BAH63412.1| putative ribulose-phosphate 3-epimerase [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
Length = 229
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 5/210 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ D +L E++ + + A ++H D+MDG +V N++ A + +R Y+ D
Sbjct: 5 LSPSLMCMDMMKLTEQLRFL-NSKADRLHVDIMDGHYVKNLALSASFVAQIRPYTSLPID 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
HLM+ + S I + DAG D + HPE+ R + + GK+ G+ +NP TPV
Sbjct: 64 VHLMVEAPASFIPALLDAGADAFSLHPETICREAFRVINMLRQAGKEVGMVLNPATPVES 123
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
++ + +D + +MTV+PG+ GQ I + KI Q L S+ LEVDG
Sbjct: 124 IQHYLHLLDKVTVMTVDPGYAGQPFIPEMLAKITQLHQLKETGSLRFLLEVDGSCNRNTY 183
Query: 184 KSLVQAGADLLVVGSS-FFNQKGEISYAKR 212
++L+ AGA +LV+GSS F + A
Sbjct: 184 RALLGAGAQILVMGSSGLFRADMPLELAWE 213
>gi|269215465|ref|ZP_06159319.1| ribulose-phosphate 3-epimerase [Slackia exigua ATCC 700122]
gi|269130952|gb|EEZ62027.1| ribulose-phosphate 3-epimerase [Slackia exigua ATCC 700122]
Length = 244
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 7/212 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++I PSIL+ADF + +I IT GA IH DVMDG FVPN++ GA V+ L
Sbjct: 12 MHSDVRISPSILSADFMNMERDIEAITMGGADLIHVDVMDGHFVPNLTIGAPVVEGLSHV 71
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP----HIRRSLRTIHAMGKKTGVA 116
+ D HLM+S+ + ++T H E+ +++ IHA G K +A
Sbjct: 72 ARIPLDVHLMVSNPLDQLPWFLKHAPYLVTVHAEALDAEAGEFSQAIDAIHAAGSKACIA 131
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+ P+T V +L VI ++DM+LIM+V PGF GQ I + ++ + + S +EV
Sbjct: 132 LRPDTDVDVLAPVIADLDMVLIMSVYPGFSGQSYIGGSDARVARVVEIARAAGASPLIEV 191
Query: 175 DGGVTSRNI-KSLVQAGADLLVVGSSFFNQKG 205
DGG+ + +++V AGAD+LV GS+ F+
Sbjct: 192 DGGLGANEATRAVVAAGADVLVAGSAVFSNGD 223
>gi|258507394|ref|YP_003170145.1| allulose-6-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
gi|257147321|emb|CAR86294.1| Ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
gi|259648750|dbj|BAI40912.1| allulose-6-phosphate 3-epimerase [Lactobacillus rhamnosus GG]
Length = 229
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQ PS++ + ++ GEE+ + H D+MDG +V N+S I+ +R +
Sbjct: 3 NIQFSPSLMTMNLNQFGEELKFL-STKVDSFHIDIMDGHYVKNLSLSPWFIQEVRKVTSL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+ +N + + C+ I H E I R + IH G K GV +NPETP
Sbjct: 62 PLSAHLMVEDPAFWVNQLINLKCEWICMHIEVLNGIAFRLIDQIHEAGLKAGVVLNPETP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V+ + VID +D I IMTV+PGF GQ+ IE + KI K + + +E+DG
Sbjct: 122 VSTILPVIDLVDKITIMTVDPGFAGQRFIEEALSKIVDLKEIRSEHHYDYLIEMDGSSNR 181
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAK 211
RN + +AG D+ +VG S F I +
Sbjct: 182 RNFPRIAEAGPDIYIVGRSGLFGLTNNIEMSW 213
>gi|13541095|ref|NP_110783.1| ribulose-phosphate 3-epimerase [Thermoplasma volcanium GSS1]
gi|14324480|dbj|BAB59408.1| ribulose-5-phosphate 3-epimerase [Thermoplasma volcanium GSS1]
Length = 211
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 5/214 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSI+AA ++ ++ AGA H DVMDG FVPNI+ G D +LRS S
Sbjct: 1 MLVSPSIVAASLTKFQAQVKECEDAGAYSFHLDVMDGNFVPNITVGPDFYFALRSISKIP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+ D + D + H ES +I+ ++ + G K G+ INP TP +
Sbjct: 61 IDTHLMVDRPDYYYEKFLSQN-DRVLIHYESPINIKGLIKKMENEGVKYGLVINPNTPFS 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ D+++ +++LIM+V PGF GQ+ I+ + KI++A+ I + + +EVDGG+
Sbjct: 120 KVSDLLERAEILLIMSVYPGFSGQKFIDVS-EKIKEARNYIKEMGLRTMIEVDGGINENT 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + AGAD++V S F K L+ +
Sbjct: 179 AKIVKNAGADIVVSASYLF-SGDITDRIKTLSSI 211
>gi|296108872|ref|YP_003615821.1| ribulose-phosphate 3-epimerase [Methanocaldococcus infernus ME]
gi|295433686|gb|ADG12857.1| ribulose-phosphate 3-epimerase [Methanocaldococcus infernus ME]
Length = 224
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 4/186 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I SIL+ADFS L EE+ +AG H D+MDG FVPNIS G + + ++ +
Sbjct: 2 VLIGASILSADFSNLKEELKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTSLP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+ ++D IN D D I+FH E+ R + I+ +G K VA+NP TP+
Sbjct: 62 VEVHLMVENVDLFINEFKD--MDYISFHIEAVKFPFRIINKINEIGAKPIVALNPATPIG 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTSRN 182
+E ++DE+ +L+MTV PGF GQ+ I + KIR+ K++I G + + VDGG+ +
Sbjct: 120 RIEYILDEVYGVLVMTVEPGFAGQKFIPIMVKKIRKLKSMIVEGGHDVKIFVDGGINTET 179
Query: 183 IKSLVQ 188
V+
Sbjct: 180 APLAVK 185
>gi|323308592|gb|EGA61836.1| Rpe1p [Saccharomyces cerevisiae FostersO]
Length = 201
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 39 MDGCFVPNISFGADVIRSLR-------------SYSDSVFDCHLMISSIDSHINIIADAG 85
MDG FVPNI+ G ++ SLR + FDCH+M+ + + ++ A G
Sbjct: 1 MDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
D TFH E++ ++ I + G K AI P T V +L ++ +DM L+MTV PGF
Sbjct: 61 ADQFTFHYEATQDPLHLVKLIKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGF 120
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
GGQ+ +E +PK+ +A ++++VDGG+ I +AGA+++V G+S F
Sbjct: 121 GGQKFMEDMMPKVETLRAKF--PHLNIQVDGGLGKETIPKAAKAGANVIVAGTSVFTAAD 178
Query: 206 EISYAKRLND 215
+ +
Sbjct: 179 PHDVISFMKE 188
>gi|167757587|ref|ZP_02429714.1| hypothetical protein CLORAM_03137 [Clostridium ramosum DSM 1402]
gi|237735142|ref|ZP_04565623.1| ribulose-phosphate 3-epimerase [Mollicutes bacterium D7]
gi|167702584|gb|EDS17163.1| hypothetical protein CLORAM_03137 [Clostridium ramosum DSM 1402]
gi|229381918|gb|EEO32009.1| ribulose-phosphate 3-epimerase [Coprobacillus sp. D7]
Length = 217
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 4/214 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS++ A+F L +EI + + G H DVMDG +VPN G I + + D
Sbjct: 5 LCPSMMCANFGNLEKEIKELEEGGIDFFHLDVMDGSYVPNFGMGLQDIEYICKQATKPCD 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+ + +I A G II HPE+ H R+L+ I G K G+A+NP T +
Sbjct: 65 VHLMVVNPSDYIEKFAALGVKIIYIHPETDKHACRTLQKIKDAGAKAGIALNPGTSFETV 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ-AKALIGKRSISLEVDGGVTSRNIKS 185
++++ D +++M+VNPGF GQ+ ++ PK RQ A + +DG + I
Sbjct: 125 KELLYLCDYVMLMSVNPGFAGQKYLDFVTPKFRQFVDAASNYGGYQVMIDGACSPEKIAM 184
Query: 186 LVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKK 218
L + G ++G S+ F ++ SY + + +L+K
Sbjct: 185 LSKVGVKGFILGTSALFGKE--KSYKEIITELRK 216
>gi|159137082|gb|ABW88688.1| ribulose-phosphate 3-epimerase [Trypanosoma cruzi]
Length = 247
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 6 QIVPSILAADFSRLGEEISNI---TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-S 61
I PSI+ AD ++L E ++ + +H DV+DG F PN+SF +D + LR +
Sbjct: 24 IISPSIMVADPTQLLLEALHVLSPEGGAVEWLHVDVIDGHFAPNMSFCSDTVAGLRRHLP 83
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM++ + + ADAG TFH E++ I G + GVAI+P T
Sbjct: 84 HVFLDVHLMVAEPEKWVRPFADAGASQFTFHIEATQEPVALASKIREAGMQVGVAISPRT 143
Query: 122 PVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ L +I+ +DM+L+MTV PGF GQ+ + + K+RQ + ++++VDG +
Sbjct: 144 AIDGLIPLIENGHLDMVLVMTVEPGFAGQKFLSEPLAKVRQLRGRY--PHLNIQVDGSIN 201
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGA+ LV G + F K L
Sbjct: 202 LVTVDEAALAGANCLVPGQAVFKAKNRQENVIHLR 236
>gi|260662435|ref|ZP_05863330.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum 28-3-CHN]
gi|260553126|gb|EEX26069.1| ribulose-phosphate 3-epimerase [Lactobacillus fermentum 28-3-CHN]
Length = 237
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 70/206 (33%), Positives = 109/206 (52%), Gaps = 5/206 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT IQ+ PS++ D + E+I+ + H D+MDG FVPNI+ I+ +R
Sbjct: 1 MTRQIQLSPSLMTMDLDQFKEQITFLND-KVNSYHIDIMDGHFVPNITLSPWFIQEVRKI 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINP 119
SD HLM++ + + D C++I E + R + IH G K G+ +NP
Sbjct: 60 SDVPMSAHLMVTDPTFWVQELVDIQCEMICIPAEVVNGVAFRLIDQIHDAGLKAGMVLNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
ETPV+ LE ID +D + IMTV+PGF GQ+ +E T+ KI + L ++ +E+DG
Sbjct: 120 ETPVSALEPYIDLLDKVTIMTVDPGFAGQRFLEKTLDKITTLRELREEKGYHYEIEMDGS 179
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFN 202
++ K + A D+ ++G S F
Sbjct: 180 TNKKHWKMISDANPDVYIIGRSGLFG 205
>gi|269122425|ref|YP_003310602.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268616303|gb|ACZ10671.1| Ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 234
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 81/221 (36%), Positives = 122/221 (55%), Gaps = 6/221 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PS++ AD L I + G +H D++DG F P++ G D ++ LR +
Sbjct: 1 MKKIAISPSVMCADLVNLENSIKELEAIGVDSLHIDLIDGLFSPSMPLGIDTVKKLRKIT 60
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ FD H+M + + IN + D G + ITFH ESS H R + + G K GVA+NP T
Sbjct: 61 NMEFDVHIMSMNNELFINEMLDIGAESITFHYESSFHTDRLINLVKRSGAKVGVALNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
+++L+ ++ + D IL+M +NPGF G++ + K++ LI K ++ ++VDG
Sbjct: 121 SLSVLDYILPQCDSILLMLINPGFATDKGEKQVSYADKKVKDLSELIRKNNLDVKIQVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGS-SFFNQKGEISYAKRLNDL 216
V+ I LV AGAD LVVGS S F IS K+L D+
Sbjct: 181 RVSLETIPKLVSAGADSLVVGSTSLFIPGNTISENKKLLDI 221
>gi|302669878|ref|YP_003829838.1| ribulose-phosphate 3-epimerase family protein [Butyrivibrio
proteoclasticus B316]
gi|302394351|gb|ADL33256.1| ribulose-phosphate 3-epimerase family protein [Butyrivibrio
proteoclasticus B316]
Length = 241
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 8/230 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++ S++ AD+ L E+ + +AG H D+MDG +V N + + + S
Sbjct: 5 KKDFKLCASMMCADYGNLEREVKTLEEAGIDSFHIDIMDGRYVDNFAMSLYDMAYIAKVS 64
Query: 62 DSVFDCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI +I + D + HPE+ H +L+ I G+AINP
Sbjct: 65 TKPLDVHLMIEHPRRNIELFLKRLRPGDTVYIHPEAEYHPSTTLQKITDAKMHPGIAINP 124
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V +++++ +D +L+M VNPG Q + KI Q L K L DG
Sbjct: 125 GTSVETIKEMLRIVDRVLVMAVNPGNASQVFLPYVGEKIEQLIKLRSKMKFELYWDGACG 184
Query: 180 SRNIKSLVQAGADLLVVGSS-FFNQKGE----ISYAKRLN-DLKKSALAI 223
+ + G D V+G++ F +K IS AKRLN D K+ A+
Sbjct: 185 AERLLEYAPHGVDGFVLGTTLLFGKKTPYDEIISSAKRLNFDYLKNEAAV 234
>gi|308161906|gb|EFO64338.1| Ribulose-phosphate 3-epimerase [Giardia lamblia P15]
Length = 241
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 78/232 (33%), Positives = 114/232 (49%), Gaps = 25/232 (10%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD-SVF 65
I PSIL+ADFS+LG+E + GA +H DVMDG FVPN++ G VI SL + +
Sbjct: 4 IAPSILSADFSKLGQEAQEVLNCGADWLHVDVMDGNFVPNLTIGPPVISSLHAAVPHAFL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES---------------------SPHIRRSLR 104
DCH M + + A AG TFH E+ + R ++
Sbjct: 64 DCHFMTVDPEFWVPSAAKAGVSTFTFHIEAPSVRSGKNSPYIEPDEDIEAINIACVRLVK 123
Query: 105 TIHAMGKKTGVAINPETPVAIL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I G K G++I P+TPV+++ ++++ +D++L+MTV PGFGGQ+ I + Q K
Sbjct: 124 KIKEHGLKAGLSIKPKTPVSVIGDELLKILDLVLLMTVEPGFGGQKYIPEAAERAIQLKE 183
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +EVDGG++ I G D+ V GS F I L
Sbjct: 184 RRS--DLLIEVDGGISDATIDHACSCGIDVFVAGSYIFGASDRIIPINLLRK 233
>gi|148667821|gb|EDL00238.1| ribulose-5-phosphate-3-epimerase, isoform CRA_d [Mus musculus]
Length = 227
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Query: 42 CFVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI 99
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 48 HFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENP 107
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR 159
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 108 GALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVH 167
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++ +EVDGGV ++ +AGA+++V GS+ + L +
Sbjct: 168 WLRTQF--PTLDIEVDGGVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRN 221
>gi|328465646|gb|EGF36866.1| ribulose-phosphate 3-epimerase [Lactobacillus helveticus MTCC 5463]
Length = 216
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 4/217 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSIL AD L E I G + H D+MDG FV N+SFG +I + +
Sbjct: 1 MIIAPSILNADNLNLKENIKEAVAVGIDRFHIDIMDGHFVHNLSFGPQLISDFKREFPMI 60
Query: 65 -FDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPET 121
+ H M ++ D I AG DI+ H + + L + + G +T +AI P+
Sbjct: 61 DAEIHFMSNNPDDLIPAFVAAGADIMELHYGAMSESKLNYWLDYLASNGVETVLAIKPDV 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
++E + +I +L+MTVNPGFGGQ I + KI+Q + ++G ++ +EVDGG+ R
Sbjct: 121 QADVIEKFLPKIKQVLVMTVNPGFGGQSFIADSAEKIKQVREIVG-PNMPIEVDGGINDR 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK AGAD+ VVGS + + ++L + K
Sbjct: 180 TIKIAKDAGADVFVVGSYLYKNGNITNQVRKLEKIIK 216
>gi|313610562|gb|EFR85681.1| ribulose-phosphate 3-epimerase family protein [Listeria
monocytogenes FSL F2-208]
Length = 197
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 66/195 (33%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ +D +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTDMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +++ A ++FH E+SP + ++ I A+G K +AI+P+T +
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATINHIRALGIKPSIAISPDTEIEQ 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+ +D++DM+L+MTVNPGF GQ+ + KI++ + + + +EVDG + +
Sbjct: 123 IYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETV 182
Query: 184 KSLVQAGADLLVVGS 198
+ L GAD+ VVG+
Sbjct: 183 RLLEPIGADVYVVGT 197
>gi|149411333|ref|XP_001508282.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 212
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Query: 42 CFVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI 99
FVPNI+FG V+ SLR D FD H+M++ + + +A AG + TFH E++ +
Sbjct: 26 HFVPNITFGHPVVESLRKQLGQDPFFDMHMMVARPEQWVKPMAVAGANQYTFHLEATENP 85
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR 159
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 86 GALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVH 145
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ S+ +EVDGGV I +AGA+++V GS+ + S L +
Sbjct: 146 WLRTQF--PSLDIEVDGGVGPDTIHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 199
>gi|262037591|ref|ZP_06011046.1| D-allulose-6-phosphate 3-epimerase [Leptotrichia goodfellowii
F0264]
gi|261748389|gb|EEY35773.1| D-allulose-6-phosphate 3-epimerase [Leptotrichia goodfellowii
F0264]
Length = 226
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 6/224 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D ++ E++ + + A H D+MDG FV NI+ + L +
Sbjct: 3 KMKFSPSLMCMDLTKFKEQVDILNE-RADFYHVDIMDGHFVKNITLSPFFVEQLNKITKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ +I+ +A +G I H E+ + R + I ++G K GV +NP TP
Sbjct: 62 PIDVHLMVEFPGDYIDELAKSGATYICPHAETINKDAFRIINKIKSLGCKAGVVLNPSTP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIEST--IPKIRQAKALIGKRSISLEVDGGVTS 180
V ++ I +D I IMTV+PGF GQ I K + S +E+DG
Sbjct: 122 VEWIKYYIHLVDKITIMTVDPGFAGQPFIPEMLEKIKELKKIKEENNYSYLIEIDGSCNE 181
Query: 181 RNIKSLVQAGADLLVVGSS-FFNQKGEISYAK-RLNDLKKSALA 222
R K L AGA++L+VGSS FN + ++ A ++ ++ +A
Sbjct: 182 RTFKRLTSAGAEVLIVGSSGLFNLEEDLVVAWDKMIEIFNREIA 225
>gi|125606254|gb|EAZ45290.1| hypothetical protein OsJ_29932 [Oryza sativa Japonica Group]
Length = 354
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 70/228 (30%), Positives = 122/228 (53%), Gaps = 15/228 (6%)
Query: 2 TPSIQIVPSILAA-DFSRLGEEISNITKAGAKQIHFDVMD-----GCFVPNISFGADVIR 55
TP ++ P ++A +FSR + ++ + FVPN++ GA VI+
Sbjct: 124 TPVEEVFPLVIAQYNFSRSHALFPHAVHNYDINAFLNISNKCSNWEHFVPNLTIGAPVIQ 183
Query: 56 SLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTG 114
SLR ++ + DCHLM+++ ++ +A AG TFH E S + + +++I A G + G
Sbjct: 184 SLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPG 243
Query: 115 VAINPETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
V++ P TPV + +++ ++++L+MTV PGFGGQ+ + + K+R + S+
Sbjct: 244 VSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRK--KYPSLD 301
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+EVDGG+ I AGA+ +V GSS F + ++ L+KS
Sbjct: 302 IEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAEP---GEVISALRKS 346
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+L++DF+ L E + + GA +H D+M FVPN++ GA VI+SLR ++ +
Sbjct: 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMVTHFVPNLTIGAPVIQSLRKHTKAYL 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETPVA 124
DCHLM+++ ++ +A AG TFH E S + + +++I A G + GV++ P TPV
Sbjct: 68 DCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVE 127
Query: 125 ILEDVI 130
+ ++
Sbjct: 128 EVFPLV 133
>gi|225389348|ref|ZP_03759072.1| hypothetical protein CLOSTASPAR_03095 [Clostridium asparagiforme
DSM 15981]
gi|225044595|gb|EEG54841.1| hypothetical protein CLOSTASPAR_03095 [Clostridium asparagiforme
DSM 15981]
Length = 224
Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats.
Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 4/215 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PSIL+ + L ++ + AG +H D+ DG FV ISFG D +R++ Y+D D
Sbjct: 9 VSPSILSGNLLNLERQLDAL--AGLGNLHLDIDDGNFVRGISFGMDTVRAIVDYTDIPTD 66
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG-KKTGVAINPETPVAI 125
HL + + ++ + G + H E+ P+ L G G+A+N +TPVA
Sbjct: 67 VHLEVLNPCDYVEELCRCGVKRLCAHIEALPYPSLFLSAARKGGAAACGLAVNLKTPVAE 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
L D++D +L ++V G + K+R+A+AL+G + VDGGV + N+
Sbjct: 127 LVPYADQLDYVLFVSVEADHDGLPFRPGVLDKVREARALLG-PGTDIWVDGGVNAGNLGR 185
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V+AGA +VVG + F + + + L +L ++A
Sbjct: 186 IVRAGATGVVVGRAVFGAEDPVRAYRDLLELAEAA 220
>gi|309777957|ref|ZP_07672899.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914246|gb|EFP60044.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 221
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 70/219 (31%), Positives = 108/219 (49%), Gaps = 5/219 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSI+ + K IHFD+MDG +V N+ G + + ++
Sbjct: 3 IKISPSIMCCRIEEYKPYLELFEKVQLDSIHFDIMDGTYVKNVMLGTPIYKDIKRLCKLP 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M + ++ D I+FHPE++ + L+TI G K G+ +NP TP+
Sbjct: 63 VDIHIMSYRPEEYMEYYDIQPGDRISFHPETTAQPYKLLQTIRDKGCKAGLVLNPGTPLT 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRN 182
LE+ ID ID + +MTVNPGF GQ+++ KI++ + L+ I + VDG T N
Sbjct: 123 YLEECIDLIDYVTLMTVNPGFAGQKMVPDAPQKIKRVRTLLDAYGKAIDIVVDGNTTLEN 182
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEIS--YAKRLNDLKK 218
+ + AGA+ VVG SS Y + LK+
Sbjct: 183 SRIMRDAGANAFVVGTSSIIKGLDTFEEMYHAYVQALKQ 221
>gi|295698725|ref|YP_003603380.1| ribulose-phosphate 3-epimerase [Candidatus Riesia pediculicola
USDA]
gi|291157202|gb|ADD79647.1| ribulose-phosphate 3-epimerase [Candidatus Riesia pediculicola
USDA]
Length = 236
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 133/216 (61%), Gaps = 6/216 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGA-KQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSV 64
I SIL+A+ + LG++I+ + ++G IHFD+MD +VPN++FG + +SL Y S
Sbjct: 12 IAISILSANLASLGKDIAKLVRSGLTDIIHFDIMDNHYVPNLTFGPILCKSLIEYGIQSN 71
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F HLM + I + G I H E +++ LR I G K G+ NP+ +
Sbjct: 72 FHIHLMTDPSERLIREFIELGVHQILLHVEEGITLKKELRIIRENGCKAGIVFNPKMSLE 131
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRN 182
IL +I+EID +LIM+VNPGFGGQ IE++I ++ +A+++I + + I L VDGG+ +N
Sbjct: 132 ILTTLINEIDSVLIMSVNPGFGGQSFIENSIKRLLEARSIIDRSGKDILLGVDGGINLKN 191
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+K +V+ G D+LV+GS+ FN+ +Y + LN +K
Sbjct: 192 LKKIVETGVDILVIGSAIFNR--SRNYVEILNVFRK 225
>gi|227552566|ref|ZP_03982615.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX1330]
gi|257896906|ref|ZP_05676559.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com12]
gi|293378463|ref|ZP_06624626.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecium
PC4.1]
gi|227178315|gb|EEI59287.1| ribulose-phosphate 3-epimerase [Enterococcus faecium TX1330]
gi|257833471|gb|EEV59892.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com12]
gi|292642792|gb|EFF60939.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecium
PC4.1]
Length = 229
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS++ D + E+I + + H D+MDG +VPN++ I +R S
Sbjct: 1 MSKVLFSPSLMTMDLDKFKEQIEFLNQH-VDSYHIDIMDGHYVPNLTLSPWFIEEVRKIS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPE 120
HLM++ +N + C+ I H E + R + IHA G K GV +NPE
Sbjct: 60 HLPMSAHLMVTDQSFWVNQLISQKCEWICMHVECLDGLAFRLIDQIHAAGLKAGVVLNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ + ID +D I IMTV+PGF GQ+ IEST+ KI + L ++ +E+DG
Sbjct: 120 TPIETIFPYIDLVDKITIMTVDPGFAGQRFIESTLDKIVDLRKLRQEKGYHYLIEMDGSS 179
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
++ K + AG D+ ++G S F +I + +
Sbjct: 180 NRKSFKRIDHAGPDIYIIGRSGLFGLDEDIEKSWAI 215
>gi|193084087|gb|ACF09757.1| ribulose-phosphate 3-epimerase [uncultured marine group III
euryarchaeote AD1000-40-D7]
Length = 200
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 6/204 (2%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+L ADF R+ E + A +H DVMDG FVPN++ G D+++SL + D HLM
Sbjct: 1 MLGADFGRMREAAEMVAPHSA-YLHMDVMDGHFVPNLTMGPDLVKSLE--GIAPLDVHLM 57
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
++ I DAG +II+ H E++ + ++L++I K G+A+NP TP + +E I
Sbjct: 58 VTDPIDFIEDFRDAGAEIISVHVEANNTL-KALKSIKKNNMKAGIALNPSTPESSIEPFI 116
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
D D+IL+M+V PG+ GQ E+T+ ++R K + +EVDGGV+ N + LV AG
Sbjct: 117 DLADIILVMSVEPGYCGQDFHENTVERVRHYKKTYPDK--IVEVDGGVSPSNSERLVDAG 174
Query: 191 ADLLVVGSSFFNQKGEISYAKRLN 214
AD+LV GS+ F I K +
Sbjct: 175 ADILVAGSAIFKADEPIEIVKIMK 198
>gi|257899637|ref|ZP_05679290.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com15]
gi|257837549|gb|EEV62623.1| ribulose-phosphate 3-epimerase [Enterococcus faecium Com15]
Length = 229
Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS++ D + E+I + + H D+MDG +VPN++ I +R S
Sbjct: 1 MSKVLFSPSLMTMDLDKFKEQIEFLNQH-VDSYHIDIMDGHYVPNLTLSPWFIEEVRKIS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPE 120
HLM++ +N + C+ I H E + R + IHA G K GV +NPE
Sbjct: 60 HLPMSAHLMVTDQSFWVNQLIAQKCEWICMHVECLDGLAFRLIDQIHAAGLKAGVVLNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ + ID +D I IMTV+PGF GQ+ IEST+ KI + L ++ +E+DG
Sbjct: 120 TPIETIFPYIDLVDKITIMTVDPGFAGQRFIESTLDKIVDLRKLRQEKGYHYLIEMDGSS 179
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
++ K + AG D+ ++G S F +I + +
Sbjct: 180 NRKSFKRIDHAGPDIYIIGRSGLFGLDEDIEKSWTI 215
>gi|306830609|ref|ZP_07463775.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325977590|ref|YP_004287306.1| allulose-6-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|304427256|gb|EFM30362.1| ribulose-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177518|emb|CBZ47562.1| allulose-6-phosphate 3-epimerase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 229
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ ++ PS++ D + E+I+ + K + H D+MDG FVPNI+ I+ +R S
Sbjct: 1 MKTAELSPSLMCMDLDKFTEQITFLNKH-VQSYHMDIMDGHFVPNITLSPWFIQEVRKIS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPE 120
D HLM+ + + + C+ I H E + R + IH G K GV +NPE
Sbjct: 60 DLPMSAHLMVEDPTFWVQELINIKCEWICMHAEVLNGLAFRLIDQIHEAGLKAGVVLNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ + I +D I IMTV+PGF GQ+ +E T+ KI + + L K+ S +E+DG
Sbjct: 120 TPIETIFPYIALVDKITIMTVDPGFAGQRFLEDTLEKIIELRHLRKKQGYSYVIEMDGSS 179
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+ + K + A D+ V+G S F +I + +
Sbjct: 180 SRKTFKRIDAANPDIYVIGRSGLFALDDDIEKSWHM 215
>gi|257888206|ref|ZP_05667859.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,141,733]
gi|257824260|gb|EEV51192.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,141,733]
Length = 229
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS++ D + E+I + H D+MDG +VPN++ I +R S
Sbjct: 1 MSKVLFSPSLMTMDLDKFKEQIEFLNHH-VDSYHIDIMDGHYVPNLTLSPWFIEEVRKIS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPE 120
HLM++ +N + C+ I H E + R + IHA G K GV +NPE
Sbjct: 60 HLPMSAHLMVTDQSFWVNQLISQKCEWICMHVECLDGLAFRLIDQIHAAGLKAGVVLNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ + ID +D I IMTV+PGF GQ+ IEST+ KI + L ++ +E+DG
Sbjct: 120 TPIETIFPYIDLVDKITIMTVDPGFAGQRFIESTLDKIVDLRKLRQEKGYHYLIEMDGSS 179
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
++ K + AG D+ ++G S F +I + +
Sbjct: 180 NRKSFKRIDHAGPDIYIIGRSGLFGLDEDIEKSWAI 215
>gi|229827841|ref|ZP_04453910.1| hypothetical protein GCWU000182_03233 [Abiotrophia defectiva ATCC
49176]
gi|229788040|gb|EEP24154.1| hypothetical protein GCWU000182_03233 [Abiotrophia defectiva ATCC
49176]
Length = 227
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 7/214 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + S++ DF + +I + + H DVMDG F NI+ D+I+++
Sbjct: 1 MKPLFTV--SLMCMDFLDMKNQIDVLNEE-FDGYHMDVMDGHFCKNITLSPDIIKAVGKA 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM + + I A+AG ++I+ H E+ + + R++ I +G KTGV +NP
Sbjct: 58 AKKPMDVHLMTTEPNDWIKSCAEAGAELISPHAETINTNAFRTINRIKDLGCKTGVTLNP 117
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGG 177
TP+A ++ + ID++ IMTV+ GF GQ I + KI++AK L + + +DG
Sbjct: 118 ATPLAYCKEYLGRIDVLTIMTVDVGFAGQPFIREMLDKIKEAKKLREENGWHYQIMIDGS 177
Query: 178 VTSRNIKSLVQAGADLLVVGSS-FFNQKGEISYA 210
+ K L AGA+ ++GSS F+ ++ A
Sbjct: 178 CNKKTFKDLYAAGAECFILGSSGLFSLDDDLRVA 211
>gi|293570822|ref|ZP_06681869.1| D-allulose-6-phosphate 3-epimerase [Enterococcus faecium E980]
gi|291609090|gb|EFF38365.1| D-allulose-6-phosphate 3-epimerase [Enterococcus faecium E980]
Length = 229
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS++ D + E+I + + H D+MDG +VPN++ I +R S
Sbjct: 1 MSKVLFSPSLMTMDLDKFKEQIEFLNQH-VDSYHIDIMDGHYVPNLTLSPWFIEEVRKIS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPE 120
HLM++ +N + C+ I H E + R + IHA G K GV +NPE
Sbjct: 60 HLPMSAHLMVTDQSFWVNQLIAQKCEWICMHVECLDGLAFRLIDQIHAAGLKAGVVLNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ + ID +D I IMTV+PGF GQ+ IEST+ KI + L ++ +E+DG
Sbjct: 120 TPIETIFPYIDLVDKITIMTVDPGFAGQRFIESTLDKIVDLRKLRQEKGYHYLIEMDGSS 179
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
++ K + AG D+ ++G S F +I + +
Sbjct: 180 NRKSFKRIDHAGPDIYIIGRSGLFGLDEDIEKSWAI 215
>gi|291518325|emb|CBK73546.1| ribulose-5-phosphate 3-epimerase [Butyrivibrio fibrisolvens 16/4]
Length = 220
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 3/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ S++ AD+ L E++ + + G H D+MDG FVPN + + +R + S +
Sbjct: 2 EFELNASMMCADYGHLSREVNELEEGGIDSFHIDIMDGRFVPNFAMSLNDMRYIASVTFK 61
Query: 64 VFDCHLMISSIDSHINIIAD--AGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLM+ + I + D + HPE+ H +L+ + G G+AINP T
Sbjct: 62 PLDVHLMVEHPSNTIELFLSNLRKGDTVYIHPEAEYHPSTTLQKVIDAGMIPGIAINPGT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ +++++ +D +L+M+VNPG GQ + KI + L + + DG +
Sbjct: 122 SIETVKEMLKIVDKVLVMSVNPGNAGQMYLPYVGEKIEKLLKLKERYGFKIYWDGACSGN 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I G D ++G++ +G +Y L D++
Sbjct: 182 KILEYAPKGVDGFILGTTLLFGRGR-TYKDILEDVRN 217
>gi|257877468|ref|ZP_05657121.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC20]
gi|257811634|gb|EEV40454.1| ribulose-phosphate 3-epimerase [Enterococcus casseliflavus EC20]
Length = 228
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 75/209 (35%), Positives = 117/209 (55%), Gaps = 6/209 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I++ PSI+ AD + L ++ + G +H D++DG F P++ G + I+ +R
Sbjct: 1 MNKNIKLSPSIMCADLANLENSMNELKMNGFDTLHIDLIDGRFSPSMPIGIETIKRMREI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
SD FD HLM ++ I + G D ITFH E+S H+ ++ + K GVA+NP
Sbjct: 61 SDMKFDVHLMSTNNTFFIQEMISIGVDHITFHYETSRHLDYDIKFVKQNNTKVGVALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQ---QLIESTIPKIRQAKALI--GKRSISLEVD 175
TP+++L V+ EIDM+ +M +NPGF Q + I + KI LI + ++VD
Sbjct: 121 TPLSVLNYVLPEIDMVCLMLINPGFASQKSEKQISYGVKKISDLSNLILAEQLHTQIQVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGS-SFFNQ 203
G V+ I L+ AGA+ LV+GS S F +
Sbjct: 181 GRVSLEVIPDLICAGANNLVLGSTSIFRE 209
>gi|50365039|ref|YP_053464.1| pentose-5-phosphate-3-epimerase [Mesoplasma florum L1]
gi|50363595|gb|AAT75580.1| pentose-5-phosphate-3-epimerase [Mesoplasma florum L1]
Length = 223
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 8/221 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I I PS L+A+F+ L EI +A + IH+DVMD FVPN++FG+ V++ + + S
Sbjct: 1 MQKITIAPSFLSANFADLKNEIKRCKEANIEWIHYDVMDYDFVPNLTFGSKVLKDIVNSS 60
Query: 62 DSVFDCHLMI----SSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGV 115
D D H M+ + + ++T H ES I +
Sbjct: 61 DFKIDIHFMVKVKTKRFEDFFSEYIKCKPTMMTMHVESMSKKEINMFYNICKTNNIMFSL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLE 173
A++P+T + +L ID+++ ILIM+V PGFGGQ I + K++ L + S+E
Sbjct: 121 AVSPKTNIKVLNKWIDKLENILIMSVEPGFGGQSFIPEVLEKVKHLAELKKTNGYTYSIE 180
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+DGG+ K + AG +++V GS F K + + L
Sbjct: 181 IDGGINDETSKKAIDAGVEMIVAGSYLFESKNFLEKVESLK 221
>gi|159119502|ref|XP_001709969.1| Ribulose-phosphate 3-epimerase [Giardia lamblia ATCC 50803]
gi|157438087|gb|EDO82295.1| Ribulose-phosphate 3-epimerase [Giardia lamblia ATCC 50803]
Length = 241
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 25/232 (10%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSVF 65
I PSIL+ADFS+LG+E + GA +H DVMDG FVPN++ G VI +L + ++
Sbjct: 4 IAPSILSADFSKLGQEAQEVLNCGADWLHVDVMDGNFVPNLTIGPPVISALHAAVPNAFL 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES---------------------SPHIRRSLR 104
DCH M + I+ A AG TFH E+ + R +
Sbjct: 64 DCHFMTNDPGFWISSTAKAGASTFTFHIEAPSVRSGRNSPYIDPDEDLEAINTACARLVE 123
Query: 105 TIHAMGKKTGVAINPETPVAIL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I A G K G++I P+TP +++ +D++ +D++L+MTV PGFGGQ+ I K Q K
Sbjct: 124 EIKAHGLKAGLSIKPKTPASVIGDDLLKALDLVLLMTVEPGFGGQKYIPEAAEKAIQLKK 183
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +EVDGG++ I G D V GS F L
Sbjct: 184 RRS--DLLIEVDGGISDATIDHACSCGIDAFVAGSYIFGASDRSIPITLLRK 233
>gi|313113099|ref|ZP_07798730.1| putative ribulose-phosphate 3-epimerase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624586|gb|EFQ07910.1| putative ribulose-phosphate 3-epimerase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 223
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 2/209 (0%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PS+ DF ++I + G + H D+MDG +VPN+ F +++ L+ +
Sbjct: 2 EIINAPSLANCDFLNFRDQIFQLVDGGCQWFHIDIMDGHYVPNLCFPVRLVKELKQTFPA 61
Query: 64 V-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM++ ++I + ++G D ++FH +S+P RR L I A G K G+ INP P
Sbjct: 62 IQMDVHLMVTDPMTYIAPLRESGADWVSFHLDSTPFARRGLAAIRAQGMKAGIVINPSQP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+++LE +ID +D I++MTV PG+ GQ+ + ++ ++ Q L G R I + +DGGV +
Sbjct: 122 ISLLEPLIDFVDYIVLMTVEPGYAGQRFLSDSLSRLEQLVQLRGNRPIPISIDGGVDMYH 181
Query: 183 IKSLVQAGADLLVVGSS-FFNQKGEISYA 210
+ GA + V G FNQ IS A
Sbjct: 182 AAECARRGAQIFVTGIYTVFNQPDNISAA 210
>gi|296090234|emb|CBI40053.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 99/183 (54%), Gaps = 6/183 (3%)
Query: 42 CFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPE-SSPHIR 100
FVPN++ GA VI SLR ++++ DCHLM+++ ++ + AG TFH E S + +
Sbjct: 110 HFVPNLTIGAPVIESLRKHTNAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEVSKENWQ 169
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPK 157
+ I + G + GVA+ P TP+ + +++ ++M+L+MTV PGFGGQ+ + + K
Sbjct: 170 ELVERIRSKGMRPGVALKPGTPIEEVYPLVEGENPVEMVLVMTVEPGFGGQKFMPEMMDK 229
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+R + S+ +EVDGG+ I AGA+ +V GSS F L
Sbjct: 230 VRALRK--KYPSLDIEVDGGLGPSTIDMAASAGANCIVAGSSVFGAPKPEQVISLLRKSV 287
Query: 218 KSA 220
+ A
Sbjct: 288 EEA 290
>gi|238916225|ref|YP_002929742.1| ribulose-phosphate 3-epimerase [Eubacterium eligens ATCC 27750]
gi|238871585|gb|ACR71295.1| ribulose-phosphate 3-epimerase [Eubacterium eligens ATCC 27750]
Length = 218
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ S++ A+F L +E+ + AG H D+MDG +VPN + + +R +RS +D
Sbjct: 4 ELTASMMCANFGNLEKEVRELDAAGIDSFHIDIMDGRYVPNFAMSLNDMRYIRSATDKPL 63
Query: 66 DCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLMI ++HIN+ ++ D + HPE+ H +L+ I G G+AINP T +
Sbjct: 64 DVHLMIEHPNTHINLFLNSLKEGDTVYIHPEAEYHPSTTLQKIINAGLIPGIAINPGTSI 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ +++ +D +L+M+VNPG GQ + KI + + + + + DG + I
Sbjct: 124 ETVMEMLQIVDKVLVMSVNPGNAGQMYLPYVGKKIERLLKIREEMNFEVYWDGACGADKI 183
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ G V+G++ KG YA L ++++
Sbjct: 184 STFAPMGVKGFVLGTTLLFGKGRP-YADILKEIRR 217
>gi|266622550|ref|ZP_06115485.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
gi|288865728|gb|EFC98026.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
Length = 232
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 66/224 (29%), Positives = 119/224 (53%), Gaps = 5/224 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+ + P++ + E++ + K G K +H D+MDG +VPN+ F ++ +R
Sbjct: 4 RDLIVNPTLACGNPLNFKEDLDILEKTGIKILHIDIMDGHYVPNLCFDTGMVGLIRKNYS 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ D HLM+++ + +I +A AG D ++FH +++ R L I G K GV +NP
Sbjct: 64 FLLDVHLMVTNPEDYIQPLAAAGADYVSFHLDATHFPIRMLNQIRENGMKGGVVLNPAQS 123
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
+L + + +D IL+M V PGF GQ+ +E T+ K+ + ++ + +S +E DGGV
Sbjct: 124 PDLLAETLPYLDFILVMGVEPGFSGQKFLEGTVDKVGKLDSMRKELGLSYLIEADGGVDR 183
Query: 181 RNIKSLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKKSALAI 223
N +L++ GAD LV G+ F + + + + ++ AL
Sbjct: 184 ENTVTLLEHGADTLVSGAFGVFEGRNGLE--QDCREYRELALKA 225
>gi|148667820|gb|EDL00237.1| ribulose-5-phosphate-3-epimerase, isoform CRA_c [Mus musculus]
Length = 188
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Query: 41 GCFVPNISFGADVIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
FVPNI+FG V+ SLR D FD H+M+S + + +A AG + TFH E++ +
Sbjct: 1 MHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATEN 60
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
++ I G K G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+
Sbjct: 61 PGALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV 120
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++ +EVDGGV ++ +AGA+++V GS+ + L +
Sbjct: 121 HWLRTQF--PTLDIEVDGGVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRN 175
>gi|330938435|gb|EGH42054.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 169
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 74/163 (45%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ D HLM+S +D I +AG ITFHPE++ HI RSL+ I G K G+ NP T
Sbjct: 7 TAPIDVHLMVSPVDRIIGDFIEAGATYITFHPEATQHIDRSLQLIREGGCKAGLVFNPAT 66
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
P+ +LE V+D++DMIL+M+VNPGFGGQ+ I T+ K+R+A+ALI R I LE+DGGV
Sbjct: 67 PLNLLEYVMDKVDMILLMSVNPGFGGQKFIPGTLNKLREARALIDASARDIRLEIDGGVN 126
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
NI+ + AGAD V GS+ FN +++ S+ A
Sbjct: 127 VNNIREIAAAGADTFVAGSAIFNAPDYREVIEKMRTELASSRA 169
>gi|293416932|ref|ZP_06659569.1| ribulose-phosphate 3-epimerase [Escherichia coli B185]
gi|291431508|gb|EFF04493.1| ribulose-phosphate 3-epimerase [Escherichia coli B185]
Length = 236
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P I + PS++ AD L + + + + G +H D++D F P++ G + I+ LR +
Sbjct: 3 APKIVLSPSLMCADLLNLSDAVKALEEIGVDALHIDLIDSAFSPSMPLGLETIKQLRKAT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ FD H+M + + I + + G ++FH E+S H R + I + GVA+NP T
Sbjct: 63 NLPFDIHIMSMNNEWFIQQVLEIGVQRVSFHYETSLHPDRLVNLIKKHNVEVGVALNPAT 122
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQ---LIESTIPKIRQAKALIG--KRSISLEVDG 176
+ L+ ++ +D +L+M +NPGF G + + I K+R + I +++VDG
Sbjct: 123 SLTSLDYLLPSLDYVLLMLINPGFAGDKNETQVPYAIEKVRNLREKICGIDSGAAIQVDG 182
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
V+ +I L+ AGA+ LV+GS+ KG
Sbjct: 183 RVSFASIPGLIAAGANNLVLGSTGLFIKG 211
>gi|224456982|ref|ZP_03665455.1| D-ribulose-phosphate 3-epimerase [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 185
Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 74/182 (40%), Positives = 108/182 (59%), Gaps = 6/182 (3%)
Query: 39 MDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
MD +VPN++FG V+++LR Y + D HLM+ +D+ I A AG I FHPE+S
Sbjct: 1 MDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASE 60
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
HI RSL+ I + G + G+A+NP T + L+ V ID +LIM+VNPGFGGQ+ I + + K
Sbjct: 61 HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGGQKFIPAMLDK 120
Query: 158 IRQAKALIG--KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ I R I LE+DGGV NI + G + V GS+ FN SY + ++
Sbjct: 121 AKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSD---SYKQTIDK 177
Query: 216 LK 217
++
Sbjct: 178 MR 179
>gi|309778127|ref|ZP_07673064.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914133|gb|EFP59936.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 227
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D ++ E+I I + A H D+MDG FV NI+ D + ++ S DCHLM+++
Sbjct: 1 MDLLKIKEQIQ-ILNSHADFYHIDIMDGHFVKNITLSPDFVEAISRISSVPLDCHLMVTN 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
D +I +A A I+ E+ + R L IH +G K G+ +NP TP++ ++ +
Sbjct: 60 PDDYIVTLAKAKAAYISPQAETINSDAFRILHKIHDLGCKAGIVLNPATPLSYVQHYLHL 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAG 190
+D I IM+V+PGF GQ I + KI++A+ L K +EVDG + L AG
Sbjct: 120 VDKITIMSVDPGFAGQAFIREMLDKIKEARKLKAKHGYHYLIEVDGSCNAATFSELRDAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKR 212
++ +VG S F + A +
Sbjct: 180 VEVFIVGNSGLFQLDENLDTAWK 202
>gi|225406856|ref|ZP_03761045.1| hypothetical protein CLOSTASPAR_05077 [Clostridium asparagiforme
DSM 15981]
gi|225042612|gb|EEG52858.1| hypothetical protein CLOSTASPAR_05077 [Clostridium asparagiforme
DSM 15981]
Length = 220
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 3/208 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+PS+ +++ + LGE+ + + AG +H D+ DG F P I+FG D ++ LR Y+D+
Sbjct: 2 FLILPSLASSNLAALGEQAARVRSAG--YLHLDIEDGNFSPGITFGPDTVKLLRDYTDAE 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM++ +S+I + D G I H ESS + R+L I G + G+A+N +TPVA
Sbjct: 60 LDAHLMVTDPESYIEELRDYGVRSIAVHLESSRYPSRALNKICQAGMRPGLALNYKTPVA 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
D + +L++T G + ++ ++ + + L + VDGGVT N+
Sbjct: 120 EAVPYADLAEYVLLLTNESDCAGIKFKPYSLDRVMELRRLAPA-GCEIWVDGGVTPENLP 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKR 212
L AGAD V+G + F+ + +
Sbjct: 179 LLAAAGADRAVMGRAVFSAADPAARIRE 206
>gi|239625229|ref|ZP_04668260.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47_FAA]
gi|239519459|gb|EEQ59325.1| ribulose-phosphate 3-epimerase [Clostridiales bacterium 1_7_47FAA]
Length = 236
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 67/228 (29%), Positives = 122/228 (53%), Gaps = 10/228 (4%)
Query: 1 MTPSI-----QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIR 55
M+ I I PS++ D L ++ + ++G + +H D++DG F P++ G + ++
Sbjct: 1 MSKEIWNHSCIISPSLICLDLCNLEQQAKLVEESGIQMLHVDILDGHFSPSMPLGLETVK 60
Query: 56 SLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
LR +D F+ H+M S+ I+ + + G I FH E++ H+ L IH G + GV
Sbjct: 61 QLRKKTDLEFEAHVMTSNPQYFIDELLECGVSQIVFHIETADHVDGLLNYIHGKGVRAGV 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGF---GGQQLIESTIPKIRQAKALIGKRSIS- 171
A+ P TP+ +L+ V+D+ D +L+M +NPGF G+ + KIR + +I R +
Sbjct: 121 ALKPGTPLTVLDYVLDKCDAVLLMLINPGFAQCAGEAQVSYGDRKIRDLRKMIDHRGLDT 180
Query: 172 -LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ +DG ++ +NI+ + A++ V GS+ + K +NDL +
Sbjct: 181 RIILDGRISPKNIEDYGRGIANIFVAGSTCIKKDDLAGSLKAVNDLAQ 228
>gi|328955165|ref|YP_004372498.1| ribulose-5-phosphate 3-epimerase [Coriobacterium glomerans PW2]
gi|328455489|gb|AEB06683.1| ribulose-5-phosphate 3-epimerase [Coriobacterium glomerans PW2]
Length = 229
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 74/223 (33%), Positives = 128/223 (57%), Gaps = 7/223 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ + PSI+ A+ L ++I + + G IH D++DG F P++ G + I+S+R
Sbjct: 1 MNDTVILSPSIMCANLVNLEQDIHELKRIGFNTIHIDLIDGIFSPSMPLGIETIKSMRKI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+VFD H+M + I + + G ITFH E+S H R + I G + G+A+NP
Sbjct: 61 TDAVFDVHIMAHDNEFFIRQMLEIGAQKITFHLETSLHADRYIHLIKNAGAQVGIALNPS 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
TP+++LE ++ E+D + +M +NPGF + + KIR +I ++ + ++VD
Sbjct: 121 TPLSMLEYILKEVDRVCLMLINPGFAQDKNEHQVPYAFEKIRDLARMIHEKHLKTSIQVD 180
Query: 176 GGVTSRNIKSLVQAGADLLVVGSS--FFNQKGEISYAKRLNDL 216
G V+ I L++AGAD LV+GS+ FF+ +++L +L
Sbjct: 181 GRVSLEKIPGLIEAGADDLVLGSTSLFFHGISLADSSEKLLEL 223
>gi|328958600|ref|YP_004375986.1| D-allulose-6-phosphate 3-epimerase [Carnobacterium sp. 17-4]
gi|328674924|gb|AEB30970.1| D-allulose-6-phosphate 3-epimerase [Carnobacterium sp. 17-4]
Length = 229
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 5/216 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ PS++ D + E+I+ + H D+MDG +VPNI+ I +R S
Sbjct: 1 MKKVAFSPSLMTMDLDKFKEQITFLNHH-VDSYHIDIMDGHYVPNITLSPWFIEEVRKIS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPE 120
D HLM++ + + D C+ I H E + R + I G K GV +NPE
Sbjct: 60 DLPMSVHLMVTDPSFWVQQLVDMKCEWICMHAEVLDGLAFRLIDQIQDAGLKAGVVLNPE 119
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
TP+ + I+ +D I IMTV+PGF GQ+ I+ST+ KI + L +E+DG
Sbjct: 120 TPIETIFPYIELVDKITIMTVDPGFAGQRFIDSTLDKIVALRELREANGYQYVIEMDGSS 179
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
++ K + A D+ ++G S F +I + +
Sbjct: 180 NRKSFKRIDAADPDIYIIGRSGLFGLDEDIEKSWEI 215
>gi|298503357|ref|YP_003725297.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
TCH8431/19A]
gi|298238952|gb|ADI70083.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
TCH8431/19A]
Length = 221
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 5/206 (2%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMI 71
+ D + E+I+ + A H D+MDG FVPNI+ I+ ++ SD+ HLM+
Sbjct: 1 MTMDLDKFKEQITFLNDKVASY-HIDIMDGHFVPNITLSPWFIQEVQKISDTPLSVHLMV 59
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILEDVI 130
+ ++ + D C+ I H E + R + IH G K GV +NPETPV+ + I
Sbjct: 60 TDPTFWVDQVLDLQCEYICIHAEVLNGLAFRLIDKIHDAGLKAGVVLNPETPVSTIFPYI 119
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQ 188
D +D + IMTV+PGF GQ+ +EST+ KI++ + L + +E+DG + + K +
Sbjct: 120 DLLDKVTIMTVDPGFAGQRFLESTLYKIQELRQLRVQNGYHYIIEMDGSSSRKTFKQIDV 179
Query: 189 AGADLLVVG-SSFFNQKGEISYAKRL 213
AG D+ V+G S F +I+ A +
Sbjct: 180 AGPDIYVIGRSGLFGLDDDIAKAWDI 205
>gi|325478928|gb|EGC82036.1| putative ribulose-phosphate 3-epimerase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 220
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PSIL +DF + E ++ + K+ K+IH D+MDG FV +++FG +++LR ++D D
Sbjct: 4 ILPSILNSDFWNIKETLNALNKSKIKEIHIDIMDGNFVEDMAFGPKFVKTLREHTDLKLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLMI + + + +AG ITF+ ES+ ++ ++ + KK GVAI+P T ++ +
Sbjct: 64 LHLMIINPERKVEKFIEAGAHSITFNVESTFNVMNIIQKVKECNKKVGVAISPHTSISSI 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL--IGKRSISLEVDGGVTSRNIK 184
E ++ +D +L++T+ PG +I KI++ + + S + VDG V + ++
Sbjct: 124 EMILPFVDQVLVLTIKPGTSNSHIITEMYSKIKELHEIKNRKEYSYRIMVDGKVDDKTLR 183
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++++GAD +V G F + + + L +
Sbjct: 184 PILESGADAVVSGGYIFKNEKILENIETLRKI 215
>gi|152970296|ref|YP_001335405.1| allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955145|gb|ABR77175.1| D-allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 215
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D ++ E+I+ + K A H D+MDG +V NI+ I +L+ + D HLM++
Sbjct: 1 MDLTQFKEQITAMNK-KADFYHVDIMDGNYVRNITLSPFFIENLKKITTVPIDVHLMVNH 59
Query: 74 IDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ I + +AG DII+FHPE ++ I R L I GKK GV +NP TP + +
Sbjct: 60 PEDIIPMCLEAGADIISFHPETANNKIFRLLNQIKDAGKKCGVVLNPATPAESIAEYAHL 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAG 190
+D + +M+V+PG+ GQ+ I ++ KIR+ + E+DG + + ++G
Sbjct: 120 LDKVTVMSVDPGYAGQKFIPESLNKIRKLINMRKNNGYHYLTEIDGSCNEKTFGQIAESG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAK 211
D+ +VG S F+ ++S A
Sbjct: 180 VDVFIVGTSGLFSLHEDVSQAW 201
>gi|291457427|ref|ZP_06596817.1| D-allulose-6-phosphate 3-epimerase [Bifidobacterium breve DSM
20213]
gi|291381262|gb|EFE88780.1| D-allulose-6-phosphate 3-epimerase [Bifidobacterium breve DSM
20213]
Length = 255
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT IQ+ PS++ D + E+I+ + H DVMDG FVPNI+ + +R
Sbjct: 18 MTRKIQLSPSLMTMDLDQFKEQITFLND-KVNSFHIDVMDGHFVPNITLSPWFVEQVRKI 76
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINP 119
SD H+M+ ++ + + CD I F E + + + IHA G K G +NP
Sbjct: 77 SDVPMSAHMMVMDAPFWVDRLIEVKCDYICFPSEVANGVAFSMIDKIHAAGLKAGAVLNP 136
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGG 177
ET + +++ ID +D I IMT++PGF GQ+ +EST+ KI + +AL ++ + +E+DG
Sbjct: 137 ETSIDVIKPYIDLLDKITIMTIDPGFAGQRFLESTLDKIVELRALREEKGYNYEIEMDGS 196
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
+ K + A D+ V+G S F I +
Sbjct: 197 TNKAHWKMISDANPDVYVIGRSGLFGLTDNIESSWN 232
>gi|311990522|gb|ADQ26391.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus]
gi|311990524|gb|ADQ26392.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus]
gi|311990528|gb|ADQ26394.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus]
Length = 165
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 73/165 (44%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Query: 28 KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCD 87
+A +HFDVMDG FVPNIS G ++ S+R+ + D HLMI + +IN A+ G D
Sbjct: 1 EAQIDGLHFDVMDGQFVPNISIGIPILDSVRAATQLPIDVHLMIEQPEQYINTFAEHGAD 60
Query: 88 IITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG 147
+I+ H E++ HI R+L+ I GKK GV INP TPV L V++ +D +L+MTVNPGFGG
Sbjct: 61 MISVHVEATQHIHRALQMIKNAGKKAGVVINPGTPVESLLPVLEIVDYVLVMTVNPGFGG 120
Query: 148 QQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIKSLVQAG 190
Q IE+ K++ + L + ++EVDGG+ + IK V G
Sbjct: 121 QSFIEACAAKVKILRDLRQSLNLNFNIEVDGGINNETIKICVDNG 165
>gi|300937951|ref|ZP_07152736.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
gi|300457048|gb|EFK20541.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 21-1]
Length = 243
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
P I + PS++ AD L + + + + G +H D++D P++ G + I+ LR +
Sbjct: 10 APKIVLSPSLMCADLLNLSDAVKALEEIGVDALHIDLIDSASSPSMPLGLETIKQLRKAT 69
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ FD H+M + + I + + G ++FH E+S H R + I + GVA+NP T
Sbjct: 70 NLPFDIHIMSMNNEWFIQQVLEIGVQRVSFHYETSLHPDRLVNLIKKHNVEAGVALNPAT 129
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQ---LIESTIPKIRQAKALIG--KRSISLEVDG 176
+ L+ ++ +D +L+M +NPGF G + + + K+R + I S++++VDG
Sbjct: 130 SLTSLDYLLPSLDYVLLMLINPGFAGDKNETQVPYAMEKVRNLREKICGLDASVAIQVDG 189
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
V+ +I L+ AGA+ LV+GS+ KG
Sbjct: 190 RVSFASIPGLIAAGANNLVLGSTGLFIKG 218
>gi|46107412|ref|XP_380765.1| hypothetical protein FG00589.1 [Gibberella zeae PH-1]
Length = 218
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 34/212 (16%)
Query: 40 DGCFVPNISFGADVIRSLRSYSDSV--------FDCHLMISSIDSHINIIADAGCDIITF 91
DG FVPNI+FG V+ ++R + D FDCH+MI+ + AGC++ F
Sbjct: 8 DGHFVPNITFGPPVVAAIRGHVDQPTEAHGRGTFDCHMMIAEPKKWVKEFKKAGCNLYCF 67
Query: 92 HPESS---------------PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID----- 131
H E++ + + +R IH G G+AI P+T V +L ++++
Sbjct: 68 HYEAAFSSAAENPEDQTDEKTNPKALIRYIHDQGLLAGIAIKPDTSVDVLWEILENSEEK 127
Query: 132 -EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
DM+L+MTV PGFGGQ+ + S +PK++ +A + +++EVDGG+ + I AG
Sbjct: 128 ERPDMVLVMTVYPGFGGQKFMASELPKVQALRAKYPE--LNIEVDGGIGPKTIDEAADAG 185
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
A+++V GS+ F + + L++S A
Sbjct: 186 ANVIVAGSAVFGANDPS---EVIAQLRQSVDA 214
>gi|154319155|ref|XP_001558895.1| hypothetical protein BC1G_02529 [Botryotinia fuckeliana B05.10]
gi|150856960|gb|EDN32152.1| hypothetical protein BC1G_02529 [Botryotinia fuckeliana B05.10]
Length = 214
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 32/207 (15%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSV--------FDCHLMISSIDSHINIIADAGCDIIT 90
MDG FVPNI+FGA V+ +RS+ D FDCH+MI+ + AGCD+
Sbjct: 1 MDGHFVPNITFGAPVVTKIRSHVDRPTAKHGKGTFDCHMMIAEPKKWVKEFQKAGCDLYC 60
Query: 91 FHPESS----------------PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID--- 131
FH E++ + + +R IH G G+AI P+T V +L D+++
Sbjct: 61 FHYEAAISSTAAESPESTSESKTNPKELIRYIHDNGMLAGIAIKPDTKVDVLWDILENPE 120
Query: 132 ---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
DM+LIMTV+PGFGGQ+ + S +PK+ + + +++EVDGG+ I
Sbjct: 121 EKERPDMVLIMTVHPGFGGQKFMASELPKVAELRKRY--PDLNIEVDGGLGPGTIDQAAD 178
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLND 215
AGA+++V GS+ F K +L
Sbjct: 179 AGANVIVAGSAVFGAKDPSEVIAKLRQ 205
>gi|74005317|ref|XP_861342.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase isoform 6
[Canis familiaris]
Length = 172
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIK 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
P T V L ++IDM L+MTV PGFGGQ+ +E +PK
Sbjct: 121 PGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 159
>gi|222152471|ref|YP_002561646.1| ribulose-phosphate 3-epimerase [Streptococcus uberis 0140J]
gi|222113282|emb|CAR40822.1| putative ribulose-phosphate 3-epimerase [Streptococcus uberis
0140J]
Length = 229
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 121/216 (56%), Gaps = 6/216 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I + PSI+ AD L +I + ++G +H D++DG F P + G D ++ +R+ +D
Sbjct: 3 KIVMSPSIMCADLVNLERDIKVLEESGLDTLHIDLIDGNFSPAMPLGIDTVKRMRAITDM 62
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
FD H+M + + I+ + G +TFH E+S HI R ++ IH G K G+A+NP T +
Sbjct: 63 NFDIHIMATENEFFISEMLKIGVQSVTFHYETSRHISRYIQMIHEAGAKVGIALNPATSL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
LE ++ E+DM+ +M +NPGF + + KI K LI ++VDG V
Sbjct: 123 TELEYILPEVDMVTLMLINPGFATNKNETQVSYAAKKISDLKKLIDNNGYKISIQVDGRV 182
Query: 179 TSRNIKSLVQAGADLLVVGS-SFFNQKGEISYAKRL 213
+ +I SLV+AGAD LV+GS S F + I K+L
Sbjct: 183 SLDSIPSLVKAGADNLVLGSTSLFIKGNTIIENKKL 218
>gi|145546653|ref|XP_001459009.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426832|emb|CAK91612.1| unnamed protein product [Paramecium tetraurelia]
Length = 199
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 103/192 (53%), Gaps = 8/192 (4%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRS--LRSYSDSVFDCHLMISSIDSHINIIADAGCD 87
G +H DVMDG FVPN++FG +I+ R + + D H MI I +++AG
Sbjct: 2 GVDWLHLDVMDGHFVPNLTFGPPIIKCLTQRLQNRTFIDLHCMIQEPRKWIKDLSNAGGH 61
Query: 88 IITFHPESSP-HIRRSLRTIHAMGKKTGVAINPETPVA-ILEDVIDE--IDMILIMTVNP 143
+T H ES +I + I G + +A+ P+T + L ++ D+ DMILIMTV P
Sbjct: 62 QMTVHYESDIGNIEELSQMIRNAGMRPALALKPKTLIDHTLIEIFDKQLFDMILIMTVEP 121
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GFGGQ+ + +PK+ Q + K I +++DGGV N+ S +AGA+++V GS N
Sbjct: 122 GFGGQKFMADMLPKVTQLRQRYPK--IDIQLDGGVNCDNVISCYEAGANVIVSGSGIVNA 179
Query: 204 KGEISYAKRLND 215
K + +
Sbjct: 180 KDPQQSINYMKE 191
>gi|237748587|ref|ZP_04579067.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes OXCC13]
gi|229379949|gb|EEO30040.1| ribulose-phosphate 3-epimerase [Oxalobacter formigenes OXCC13]
Length = 222
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 3/208 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I S++ + L E S + K + +H D+MDG FVPN+ D I SLR Y
Sbjct: 1 MNKKSVISASMMCVNPFTLNETFSTLEKENIEYLHLDIMDGIFVPNLGLSLDWINSLRRY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ FD H+M + D+ + ++ DII+ H ES+P I R+L G K +AINP
Sbjct: 61 TNIPFDYHIMTINPDNILPLLQIQEKDIISIHYESTPQILRTLENAKKYGAKVFLAINPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGV 178
TP+ +LE++I ID + ++ VNPGF GQ ++ K + + +R++ + EVDG +
Sbjct: 121 TPIGVLEELIYFIDGVNLLMVNPGFAGQNMVPFGFSKAEKLHRFLDERNLDIDFEVDGNI 180
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKG 205
T N + L Q GA++ V G SS F++ G
Sbjct: 181 TFENARKLKQYGANIFVAGTSSLFDKTG 208
>gi|194014554|ref|ZP_03053171.1| D-allulose-6-phosphate 3-epimerase [Bacillus pumilus ATCC 7061]
gi|194013580|gb|EDW23145.1| D-allulose-6-phosphate 3-epimerase [Bacillus pumilus ATCC 7061]
Length = 230
Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats.
Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ PS++ D + E I +I A + H DVMDG +V NI+ I LR +D
Sbjct: 2 TAIFSPSLMCMDLTHFREHI-HILNTRADRYHVDVMDGHYVKNITLSPFFIEQLRKLTDR 60
Query: 64 VFDCHLMISSI-DSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINPET 121
D HLM + I+ DAG +I HPE + R +R IH + G +NP T
Sbjct: 61 PIDVHLMAEYPQEFLIDACIDAGASMICLHPEVVQRDVFRIIRHIHQRNCEVGFVLNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVT 179
P+A L+ + ID + IMT++PGF GQ I+ + K++Q K + K S S+EVDG
Sbjct: 121 PIAALDSYLHLIDRVTIMTIDPGFAGQPFIKEMLQKMKQVKDVKEKGGYSFSIEVDGSCN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
+ L +AG ++ ++G S F ++ A
Sbjct: 181 ESTFRLLAEAGNEIYIIGNSGLFGLHHQLDTAWE 214
>gi|167045416|gb|ABZ10071.1| putative Ribulose-phosphate 3 epimerase family protein [uncultured
marine crenarchaeote HF4000_APKG10F15]
Length = 519
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 104/219 (47%), Gaps = 5/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSI+A D S L +E+ A IH DVMDG FVPN +F I+ LR +
Sbjct: 252 ESQFMIAPSIIAGDMSNLEKEVKQCVVGRADYIHLDVMDGQFVPNKTFDHTKIKELRPLT 311
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINP 119
FD HLMI H++ DAG DIIT H E +H+ G+AINP
Sbjct: 312 LIPFDAHLMIDEPVKHVSNYIDAGSDIITVHAEVCDESTFGEICDMLHSNEVGIGLAINP 371
Query: 120 ETPVAILED-VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
+T + ++ +D I+IM+V PG GQ+ IEST K R+ + + +E DG
Sbjct: 372 DTELPQWCYKFVELLDQIIIMSVVPGKSGQKFIESTHEKTRRIAKDLKEHKFEGYIEADG 431
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GV NI + + GA V GS+ Q K +
Sbjct: 432 GVNLENIGACFEDGARAFVGGSAIIGQSDVRMIIKEFRN 470
>gi|167043311|gb|ABZ08016.1| putative Ribulose-phosphate 3 epimerase family protein [uncultured
marine crenarchaeote HF4000_ANIW141M18]
Length = 554
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 104/217 (47%), Gaps = 5/217 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSI+A D S L +E+ A IH DVMDG FVPN +F I+ LR +
Sbjct: 290 QFMIAPSIIAGDMSNLEKEVKRCVGGRADYIHLDVMDGQFVPNKTFDHTKIKELRPLTLI 349
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR--RSLRTIHAMGKKTGVAINPET 121
FD HLMI H++ DAG DIIT H E +H+ G+AINP+T
Sbjct: 350 PFDAHLMIDEPVKHVHDYVDAGSDIITVHAEVCDESSFGEICDVLHSNEVGIGLAINPDT 409
Query: 122 PVAILED-VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
+ ++ +D ++IM+V PG GQ+ IEST K R+ + + +E DGGV
Sbjct: 410 ELPQWCYKFVELLDQVIIMSVVPGKSGQKFIESTHEKTRRVTKDLREHKFEGYVESDGGV 469
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
NI + + GA V GS+ Q K +
Sbjct: 470 NLENIGACFEDGARAFVGGSAIIGQNDVRMIIKEFRN 506
>gi|27262528|gb|AAN87545.1| Ribulose-phosphate 3-epimerase [Heliobacillus mobilis]
gi|111074984|gb|ABH04842.1| ribulose-phosphate 3-epimerase [Heliobacillus mobilis]
Length = 157
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 67/151 (44%), Positives = 96/151 (63%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS LG +++++ GA+ +H DVMDG FVPNI+ G V+ SLR S V
Sbjct: 3 IKIAPSILSADFSNLGSQVADVEAGGAEYLHIDVMDGHFVPNITIGPLVVASLRPRSQMV 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
FD HLMI D +I AG D++T H E+ H+ R++ I G K GVA+NP T
Sbjct: 63 FDTHLMIEEPDRYIPDFIKAGSDLVTVHQEACTHLHRTVSLIREKGAKAGVALNPATSWQ 122
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
LE V+ +D++L+M+VNP F ++ + +
Sbjct: 123 SLEYVLPMVDLVLVMSVNPWFWRSKVYQRRL 153
>gi|126699937|ref|YP_001088834.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile 630]
gi|254975902|ref|ZP_05272374.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-66c26]
gi|255093288|ref|ZP_05322766.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile CIP
107932]
gi|255101468|ref|ZP_05330445.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-63q42]
gi|255307341|ref|ZP_05351512.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile ATCC
43255]
gi|255315035|ref|ZP_05356618.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-76w55]
gi|255517705|ref|ZP_05385381.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-97b34]
gi|255650817|ref|ZP_05397719.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-37x79]
gi|260683898|ref|YP_003215183.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
CD196]
gi|260687558|ref|YP_003218692.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
R20291]
gi|306520714|ref|ZP_07407061.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-32g58]
gi|115251374|emb|CAJ69206.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile]
gi|260210061|emb|CBA64148.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
CD196]
gi|260213575|emb|CBE05348.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
R20291]
Length = 221
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD +L EE+ + +AG K +H DVMDG FV N++ G ++++S+ +
Sbjct: 3 IICASIMCADQMKLKEELEALEEAGVKLLHCDVMDGIFVKNLAMGPELLKSISENTTIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +I++++ I+FH ESS +++ ++ + G +AI+P+T V
Sbjct: 63 DIHLATETPDKYIDMMSYIKPKYISFHVESSTNVKADIQKLRNYGIGPVLAISPQTSVDK 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+E+ I ++ IL+MTVNPGF GQ+ S + K+ + ++ +EVDG + I
Sbjct: 123 IEEYISLVEGILVMTVNPGFAGQKFNLSVLDKLDKLTEILKDYDNPPFIEVDGNINKDTI 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKS 219
K + D+ VVG S+ FN K ISY ++ +LK+S
Sbjct: 183 KLMNGKKVDIYVVGTSALFNDKPPISYKDKIEELKES 219
>gi|311990526|gb|ADQ26393.1| ribulose-5-phosphate 3-epimerase [Staphylococcus haemolyticus]
Length = 165
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/165 (44%), Positives = 103/165 (62%), Gaps = 2/165 (1%)
Query: 28 KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCD 87
+A +HFDVMDG FVPNIS G ++ S+R+ + D HLMI + +IN A+ G D
Sbjct: 1 EAQIDGLHFDVMDGQFVPNISIGIPILDSVRAATQLPIDVHLMIEQPEQYINTFAEHGAD 60
Query: 88 IITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG 147
+I+ H E++ HI R+L+ I GKK GV INP TPV L V++ +D +L+MTVNPGFGG
Sbjct: 61 MISVHVEATQHIHRALQMIKNAGKKAGVVINPGTPVESLLPVLEIVDYVLVMTVNPGFGG 120
Query: 148 QQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIKSLVQAG 190
Q IE+ K++ + L + ++EVDGG+ + IK V G
Sbjct: 121 QSFIEACAAKVKILRDLRQSLNLNFNIEVDGGIYNETIKICVDNG 165
>gi|327538881|gb|EGF25522.1| ribulose-phosphate 3-epimerase [Rhodopirellula baltica WH47]
Length = 188
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 72/181 (39%), Positives = 104/181 (57%), Gaps = 5/181 (2%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
MDG FVPN+++G ++ LR ++D D HLMIS ++ + DAG D++TFH E+
Sbjct: 1 MDGHFVPNLTYGMPIVEGLRRHTDMPLDVHLMISDPIAYAQPMVDAGADLLTFHVEAVDD 60
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
I MG GVAINP+T A L+ +D +DM+L+M+VN GFGGQQ + ++
Sbjct: 61 CVEVAGKIRDMGVGVGVAINPDTDFAKLDCCLDSVDMVLVMSVNAGFGGQQFNPVALDRL 120
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
R K K + LE+DGG+ + I AG DL VVGS+ F Q Y +N+L +
Sbjct: 121 RSLKER--KPDLLLEIDGGIKAETIGEARAAGCDLFVVGSAIFGQHD---YETAINELTQ 175
Query: 219 S 219
+
Sbjct: 176 A 176
>gi|255656294|ref|ZP_05401703.1| putative ribulose-phosphate 3-epimerase [Clostridium difficile
QCD-23m63]
gi|296450265|ref|ZP_06892026.1| possible ribulose-phosphate 3-epimerase [Clostridium difficile
NAP08]
gi|296878680|ref|ZP_06902685.1| possible ribulose-phosphate 3-epimerase [Clostridium difficile
NAP07]
gi|296261028|gb|EFH07862.1| possible ribulose-phosphate 3-epimerase [Clostridium difficile
NAP08]
gi|296430487|gb|EFH16329.1| possible ribulose-phosphate 3-epimerase [Clostridium difficile
NAP07]
Length = 221
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 75/217 (34%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD +L EE+ + +AG K +H DVMDG FV N++ G ++++S+ +
Sbjct: 3 IICASIMCADQMKLKEELEALEEAGVKLLHCDVMDGIFVKNLAMGPELLKSISENTTIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + D +I++++ I+FH ESS ++R ++ + G +AI+P+T V
Sbjct: 63 DIHLATETPDKYIDMMSYIKPKYISFHVESSTNVRADIQKLRNYGIGPVLAISPQTSVDK 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
+E+ I ++ IL+MTVNPGF GQ+ S + K+ + ++ +EVDG + I
Sbjct: 123 IEEYIGLVEGILVMTVNPGFAGQKFNLSVLDKLDKLTEILKDYDNPPFIEVDGNINKDTI 182
Query: 184 KSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKS 219
K + D+ VVG S+ FN K ISY ++ +LK+S
Sbjct: 183 KLMNGKKVDIYVVGTSALFNDKPPISYKDKIKELKES 219
>gi|255018688|ref|ZP_05290814.1| hypothetical protein LmonF_14966 [Listeria monocytogenes FSL
F2-515]
Length = 163
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 71/166 (42%), Positives = 100/166 (60%), Gaps = 4/166 (2%)
Query: 57 LRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
++ + FD H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV
Sbjct: 1 MKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVV 60
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
+NP TP + LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R I +EVDG
Sbjct: 61 LNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDG 120
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
GV K AGADL+VVGS F E L L K L
Sbjct: 121 GVNDELAKECTLAGADLIVVGSYLF----EGDIEANLEKLAKGVLT 162
>gi|270694736|ref|ZP_06222967.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae HK1212]
gi|270315989|gb|EFA28038.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae HK1212]
Length = 148
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/148 (50%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHL 69
IL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y + D HL
Sbjct: 1 ILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAPIDVHL 60
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ ID I A AG + ITFHPESS HI RSL+ I G K+G+ NP TP++ L+ V
Sbjct: 61 MVKPIDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNPATPLSYLDYV 120
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPK 157
+D++D++L+M+VNPGFGGQ I +T+ K
Sbjct: 121 LDKVDVVLLMSVNPGFGGQSFIPATLKK 148
>gi|328475807|gb|EGF46543.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes 220]
Length = 170
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 66/161 (40%), Positives = 105/161 (65%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+IVPS+ AD R+ E++ + K G +H D+MDG FVPNI+FG D I+ ++ + F
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ D +I + +AG +IT H E++ H+ R+++ I + G + GV +NP TP +
Sbjct: 63 DVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPST 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
LE V+D+ID IL+MTVNPG GGQ+ +S++ K + K ++
Sbjct: 123 LEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKSEKPKHILE 163
>gi|160937620|ref|ZP_02084981.1| hypothetical protein CLOBOL_02511 [Clostridium bolteae ATCC
BAA-613]
gi|158439689|gb|EDP17439.1| hypothetical protein CLOBOL_02511 [Clostridium bolteae ATCC
BAA-613]
Length = 222
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 3/212 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PSI +A L ++ I IH DV DG F+PNI+FG ++ + +YS +
Sbjct: 1 MKIIPSIASASQLDLKCQLDRIRD--VPYIHIDVEDGNFLPNITFGMKTVKEMAAYSKAE 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HL+ ++ +I ++ +G + H E+ P+ L + G K G+A+N P+
Sbjct: 59 LDVHLLTTNPIKYIQELSKSGISAVCGHMEALPYPLEFLHEVRQAGMKAGLALNLSMPIE 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ID D +L+MT P GQ+ + +IR+A+A I + + DGG+ +
Sbjct: 119 QVMSYIDSFDYLLLMTSEPDGCGQRFRSCALERIRRARACIPD-EVMIYADGGIGRDELG 177
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +AGAD +V+G + + + K + L
Sbjct: 178 KVAEAGADCVVMGRAVWGAEDPAKAWKEMETL 209
>gi|238790180|ref|ZP_04633956.1| Pentose-5-phosphate-3-epimerase [Yersinia frederiksenii ATCC 33641]
gi|238721718|gb|EEQ13382.1| Pentose-5-phosphate-3-epimerase [Yersinia frederiksenii ATCC 33641]
Length = 219
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
DF+RL EE+ N+ AGA H DVMDG FVPN + G + I+++ + +D HLM+++
Sbjct: 1 MDFARLSEELINLENAGAAMFHIDVMDGHFVPNFALGPEDIKAISKLATIPYDVHLMVTN 60
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D +I+ AD GC II H E+ H+ R+L I + G K GVAINP TP+++L++V+D +
Sbjct: 61 PDPYIDRFADLGCSIIYVHAEAPVHLHRTLSNIRSRGIKAGVAINPGTPLSVLDEVLDVV 120
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGA 191
D++++M+VNPGF GQ I S++ KIR+ KA++ + + +DG ++ +K+L A
Sbjct: 121 DVVMVMSVNPGFAGQPFITSSVSKIRRLKAMLQQHQSKAQIAIDGAISPEIVKTL-GADV 179
Query: 192 DLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
D+ ++G++ +K +SY + ++ L + A
Sbjct: 180 DMFILGTAGLFRKD-MSYKQAIDVLNEQA 207
>gi|303244664|ref|ZP_07330996.1| ribulose-phosphate 3-epimerase [Methanothermococcus okinawensis
IH1]
gi|302484972|gb|EFL47904.1| ribulose-phosphate 3-epimerase [Methanothermococcus okinawensis
IH1]
Length = 185
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Query: 38 VMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP 97
+MDG FVPN+S G + + +++ + D HLM+ + D I I+AD D+ITFH E+
Sbjct: 1 MMDGHFVPNLSMGIGISKYIKNITGLPTDVHLMVENPDLFIPILAD-DADMITFHIETCK 59
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
R+++ I G + VA+NP TP+ +E +++++ +LIMTV PGF GQ+ I + K
Sbjct: 60 FPFRTIKLIKDKGAEPIVALNPSTPIDTIEYILEDLCGVLIMTVEPGFSGQKFINPMLKK 119
Query: 158 IRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + K +I K + VDGG+ S +V+AGAD+L+ S+ +N++ K L +
Sbjct: 120 IDRLKNIILKEGYNTKILVDGGINSETAPKVVEAGADVLIAASAIYNKENIEEAVKILRE 179
Query: 216 LKK 218
K
Sbjct: 180 SAK 182
>gi|332815350|ref|XP_001145318.2| PREDICTED: ribulose-phosphate 3-epimerase isoform 1 [Pan
troglodytes]
Length = 199
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 29/215 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPF------- 53
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
D H+M+S + + +A AG + TFH E++ + ++ I G K+ E
Sbjct: 54 ---FLDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAE 110
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ + + + + PG + + S+ +EVDGGV
Sbjct: 111 V------QWHSQGPLQVGLAIKPGTS-----------VHWLRTQF--PSLDIEVDGGVGP 151
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+++V GS+ + S L +
Sbjct: 152 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 186
>gi|171742252|ref|ZP_02918059.1| hypothetical protein BIFDEN_01358 [Bifidobacterium dentium ATCC
27678]
gi|171277866|gb|EDT45527.1| hypothetical protein BIFDEN_01358 [Bifidobacterium dentium ATCC
27678]
Length = 288
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 5/211 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ S++ DFS GE++S +++ A +H D+MDG F PN+S + ++ + +S
Sbjct: 61 KFAVSLMCMDFSIAGEQVSTLSQH-ADSLHLDIMDGHFAPNLSLSPEWLKWVLPHSSVRN 119
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + D + +A G ++I+ H E+ + H R++ +I A+G TG+ +NP T
Sbjct: 120 EAHLMTTDPDYWLEPLAQVGVNVISPHAETLNTHAFRTMNSIRALGCGTGLVVNPLTTFE 179
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +I+ +D++ +MT++ GF GQ I+ + KI QA + +++DG + +
Sbjct: 180 SILPLIERVDLLTLMTIDVGFAGQPFIDEMLAKIEQAAKYKSDHGLDYEIQIDGSCSEKT 239
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
L AGA+ ++G S F+ ++ A
Sbjct: 240 FAKLRNAGAETFILGNSGLFSLDRDLDKAWA 270
>gi|89892397|gb|ABD78982.1| HI0566-like protein [Haemophilus influenzae]
Length = 162
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 75/159 (47%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+AD +RLG+++ N+ AGA IHFDVMD +VPN++FG V ++LR Y
Sbjct: 1 MKPYL-IAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDY 59
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +D I A AG + ITFHPESS HI RSL+ I G K+G+ NP
Sbjct: 60 GITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSEHIDRSLQLIRDCGCKSGLVFNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
TP++ L+ V+D++D++L+M+VNPG S I +I
Sbjct: 120 ATPLSYLDYVLDKVDVVLLMSVNPGIWWTIFYSSNIEEI 158
>gi|167766204|ref|ZP_02438257.1| hypothetical protein CLOSS21_00698 [Clostridium sp. SS2/1]
gi|167712284|gb|EDS22863.1| hypothetical protein CLOSS21_00698 [Clostridium sp. SS2/1]
gi|291560136|emb|CBL38936.1| Pentose-5-phosphate-3-epimerase [butyrate-producing bacterium
SSC/2]
Length = 226
Score = 194 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + I PS+ D + ++ I + +H D+ DG +VP+ G + + +L+
Sbjct: 1 MERKLMIAPSMGCCDLFDMERQV-RIIDEKSDFLHMDIKDGVYVPSFGIGPEFLAALKDK 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINP 119
+ D HLMI ++ A AG IT H + ++ I +G K G+A+NP
Sbjct: 60 VSTPMDAHLMIKHPQQYLETFAKAGAAYITPHTDCIEGDAFVTINKIKELGCKAGIALNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
P+ +E + +D + IM V+ G GQ++IE T KIR+ + ++ + +E DG
Sbjct: 120 SVPLETIEYYLPLLDKVTIMIVDAGISGQKVIEQTYDKIRKLVKIREEKGLDFLIEADGS 179
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLND 215
+ + L +AGAD++V+G + +N+ + A + +
Sbjct: 180 MNRDVYRPLYEAGADMVVLGPPALWNKADDFEEAWAIME 218
>gi|254387966|ref|ZP_05003203.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|294817512|ref|ZP_06776154.1| Ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|326446161|ref|ZP_08220895.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|197701690|gb|EDY47502.1| ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
gi|294322327|gb|EFG04462.1| Ribulose-phosphate 3-epimerase [Streptomyces clavuligerus ATCC
27064]
Length = 217
Score = 194 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 130/223 (58%), Gaps = 10/223 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT QI+P++L AD LGE I + A +H DVMDG FVP IS+G I ++R
Sbjct: 1 MT---QILPALLGADPLALGEAIDALADTRADLLHLDVMDGAFVPEISYGTRTIAAVRRR 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HL + +++++ + +A D++T H E++PHI R LRT+ G + GVA+NP
Sbjct: 58 TTLQLDVHLQVERPETYLDALIEARTDLVTVHVETTPHISRLLRTVTQAGLQAGVALNPG 117
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGG 177
TP+A +E+V++++ + +MT +PG + + KIR+ + L+ R ++ + DGG
Sbjct: 118 TPLAQVEEVLEQVVQVTVMTSSPGTS--DFMPHVLDKIRRLRTLLDSRGLNHLAIAADGG 175
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
VT +L AGAD L+ GS+ F G ++ + L+++A
Sbjct: 176 VTVARAGALRAAGADRLIAGSAVFQATGGVAAG--IEALREAA 216
>gi|254478107|ref|ZP_05091490.1| Ribulose-phosphate 3 epimerase family protein [Carboxydibrachium
pacificum DSM 12653]
gi|214035969|gb|EEB76660.1| Ribulose-phosphate 3 epimerase family protein [Carboxydibrachium
pacificum DSM 12653]
Length = 226
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 64/214 (29%), Positives = 117/214 (54%), Gaps = 1/214 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PS+ +AD L E + + K G K++H D+ DG FVPNI+FG I+ LR +D +
Sbjct: 1 MKIIPSLASADQVCLKEMVERLEKLGLKELHLDIEDGNFVPNITFGLKTIKDLRKITDML 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F HLM ++ + + + G + H E+ + + + ++G K GVA+NP+T
Sbjct: 61 FHIHLMTNNPEKYFYELKSIGVTSVAVHIEAVEYPKWIINFGKSLGFKIGVALNPKTLPD 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++E +ID++D ILIMT P + GQ+ I KI + + + VDGG+T +
Sbjct: 121 VVEYIIDDVDFILIMTSEPDYTGQKFIFPIFKKISILSQMKKEWQ-EIWVDGGITLEILP 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+++ D++V+G + F + + + ++ +
Sbjct: 180 KILEKKVDVIVLGRALFEDEKLEDHFGTIKNILE 213
>gi|256842024|ref|ZP_05547529.1| ribulose-phosphate 3-epimerase [Parabacteroides sp. D13]
gi|256736340|gb|EEU49669.1| ribulose-phosphate 3-epimerase [Parabacteroides sp. D13]
Length = 221
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P ++ S++ A+ L +I + + G +H D+MD FVPN++FG DV+ S+R
Sbjct: 1 MSP--KLSASLMCANLVNLERDIQLLEENGVDYLHIDIMDAIFVPNLTFGPDVVNSIRKI 58
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D HL++ + + DI++ H E I + I + G+A+NP+
Sbjct: 59 TNLPLDIHLLMEHPRVVVRSMDIREGDIVSIHSECKESIMENAVFIKQKKAQFGLALNPD 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR---SISLEVDGG 177
T + ++ + +D+IL+M + PGF G +I + K+R+ + + + +I + VDG
Sbjct: 119 TSIEEVKKYLPYVDVILLMLIVPGFAGSSMIHGIMEKVRETRQYLDQHSHTNIEICVDGS 178
Query: 178 VTSRNIKSLVQAGADLLVVGSS-FFNQKGEIS 208
V+ + + GA + V G++ F + +S
Sbjct: 179 VSCERARYMRNLGASIFVGGTAGVFRKDMPLS 210
>gi|328955815|ref|YP_004373148.1| Ribulose-phosphate 3-epimerase [Coriobacterium glomerans PW2]
gi|328456139|gb|AEB07333.1| Ribulose-phosphate 3-epimerase [Coriobacterium glomerans PW2]
Length = 224
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 2/212 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PSI+ + + I +AG +HFDVMDG +VPN+ G D ++ S
Sbjct: 1 MKQEFNIYPSIMCSAPWDVKGYIDAFERAGVAGVHFDVMDGHYVPNVMLGTDDFDAIASI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ D H+M D+ ++ D FHPE+ R L I G+A++P
Sbjct: 61 TELSLDVHIMAEGADAFVSFFKLRPHDRCCFHPETCAQPYRLLERIRRRASACGLALSPG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGV 178
TPV + + ++ +D +L+M V+PGF GQ ++ + K+++ + L+ + I + +DG
Sbjct: 121 TPVGYVTECLELLDFVLVMAVSPGFAGQTMVADHLNKVKRIRELVRRADHPIEIVIDGNT 180
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
T N + +++AGA+ VVG+S +G +A
Sbjct: 181 TVANARRMIEAGANGFVVGTSSLMGEGPAGFA 212
>gi|298709591|emb|CBJ31417.1| Putative fusion of putative sugar/xylulosekinase and
ribulose-phosphate epimerase [Ectocarpus siliculosus]
Length = 475
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSVF 65
+ SILAAD + L E+ + AGA IH DV+D F ++FG V+ SL R +
Sbjct: 231 VNASILAADMADLSGEVERVMAAGADWIHVDVVDNVFAKVLTFGPPVVASLRRRHPSVFL 290
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-----SPHIRRSLRTIHAMGKKTGVAINPE 120
D HL + + +++ + DAG + FHPE+ I G + GVA+ PE
Sbjct: 291 DVHLAVENPHEYVDALKDAGTSQVLFHPEAVVEGSDMDAASLAVRISEAGMRAGVALRPE 350
Query: 121 TPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
TPV+ + +++ + + ++ V PGFGGQ + + K+ + +++ + + ++VDGG
Sbjct: 351 TPVSAVLPLLEPRRLVQCVDVLAVQPGFGGQAFDSTVLAKVEELRSICPE--LDIQVDGG 408
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
V + ++ V AGA++L GS F A
Sbjct: 409 VNAATAQACVAAGANVLTSGSFIFGNNTGAVAA 441
>gi|16082304|ref|NP_394770.1| ribulose-phosphate 3-epimerase [Thermoplasma acidophilum DSM 1728]
gi|10640658|emb|CAC12436.1| probable ribulose-5-phosphate 3-epimerase [Thermoplasma
acidophilum]
Length = 211
Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 4/202 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PSI+AA ++ +++ AG+ H DVMDG FVPNI+ G D LRS S
Sbjct: 1 MLVSPSIVAASPLKIQDQVRECENAGSVSFHLDVMDGNFVPNITVGPDYYEFLRSISRIR 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM+ D + A G D++ H ES + L+ + G G+ INP+T +
Sbjct: 61 IESHLMVMRPDLYYRKFAKEG-DLVLVHYESPVNTLALLKRMKDEGIDAGIVINPDTSFS 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRN 182
+ D+++ ++LIM+V PGF GQ+ I+ + KI +A A I K + +EVDGG+
Sbjct: 120 KVSDLLEYAQILLIMSVYPGFSGQKFIDVS-DKIHEASAFIKKNGLKTKIEVDGGINDNT 178
Query: 183 IKSLVQAGADLLVVGSSFFNQK 204
+ + AGAD++V S F
Sbjct: 179 ARIVKNAGADIVVSASYIFGGN 200
>gi|323332987|gb|EGA74389.1| Rpe1p [Saccharomyces cerevisiae AWRI796]
Length = 214
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 14/163 (8%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M I I PSILA+DF+ LG E + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 1 MVKPI-IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRS 59
Query: 59 -----------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
+ FDCH+M+ + + ++ A G D TFH E++ ++ I
Sbjct: 60 VPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLIK 119
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
+ G K AI P T V +L ++ +DM L+MTV PGFGGQ++
Sbjct: 120 SKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKI 162
>gi|283456637|ref|YP_003361201.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium Bd1]
gi|283103271|gb|ADB10377.1| Ribulose-phosphate 3-epimerase [Bifidobacterium dentium Bd1]
Length = 232
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 5/211 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ S++ DFS GE++S +++ A +H D+MDG F PN+S + ++ + +S
Sbjct: 5 KFAVSLMCMDFSIAGEQVSTLSQH-ADSLHLDIMDGHFAPNLSLSPEWLKWVLPHSSVRN 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + D + +A G ++I+ H E+ + H R++ +I A+G TG+ +NP T
Sbjct: 64 EAHLMTTDPDYWLEPLAQVGVNVISPHAETLNTHAFRTMNSIRALGCGTGLVVNPLTTFE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +I+ +D++ +MT++ GF GQ I+ + KI QA + +++DG + +
Sbjct: 124 SILPLIERVDLLTLMTIDVGFAGQPFIDEMLAKIEQAAKYKSDHGLDYEIQIDGSCSEKT 183
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
L AGA+ ++G S F+ ++ A
Sbjct: 184 FAKLRNAGAETFILGNSGLFSLDRDLDKAWA 214
>gi|306822194|ref|ZP_07455576.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|309802245|ref|ZP_07696353.1| putative ribulose-phosphate 3-epimerase [Bifidobacterium dentium
JCVIHMP022]
gi|304554576|gb|EFM42481.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|308221128|gb|EFO77432.1| putative ribulose-phosphate 3-epimerase [Bifidobacterium dentium
JCVIHMP022]
Length = 232
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 5/211 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+ S++ DFS GE++S +++ A +H D+MDG F PN+S + ++ + +S
Sbjct: 5 KFAVSLMCMDFSIAGEQVSTLSQH-ADSLHLDIMDGHFAPNLSLSPEWLKWVLPHSSVRN 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM + D + +A G ++I+ H E+ + H R++ +I A+G TG+ +NP T
Sbjct: 64 EAHLMTTDPDYWLEPLAQVGVNVISPHAETLNTHAFRTMNSIRALGCGTGLVVNPLTTFE 123
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+ +I+ +D++ +MT++ GF GQ I+ + KI QA + +++DG + +
Sbjct: 124 SILPLIERVDLLTLMTIDVGFAGQPFIDEMLAKIEQAAKYKSDHGLDYEIQIDGSCSEKT 183
Query: 183 IKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
L AGA+ ++G S F+ ++ A
Sbjct: 184 FAKLRNAGAETFILGNSGLFSLDRDLDKAWA 214
>gi|325969918|ref|YP_004246109.1| ribulose-phosphate 3-epimerase [Spirochaeta sp. Buddy]
gi|324025156|gb|ADY11915.1| Ribulose-phosphate 3-epimerase [Spirochaeta sp. Buddy]
Length = 235
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 122/228 (53%), Gaps = 5/228 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS- 59
M P + PS+ + L + + + AG +H D+MDG +VPN+ F ++ L++
Sbjct: 1 MKPVVINSPSLANCNLLELKDNVQELVDAGVTWMHIDLMDGHYVPNLYFPIRIVSDLKAA 60
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
Y D H+M+++ +I ++DAG D ++FH +S+ + R+L TI G K+G+ +NP
Sbjct: 61 YPQLTLDVHMMVTNPMDYIQRLSDAGADYLSFHSDSTNFVIRTLETIRKSGMKSGILVNP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGG 177
V +E +D +DM+ +M V PGF GQQ + T+ ++ + + + + VDG
Sbjct: 121 SQSVRSIEPYVDLLDMVTLMAVEPGFAGQQFMSRTLKRVEDLATVRKESGQDFLINVDGA 180
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYA-KRLNDLKKSALAI 223
+ N+ + GA+++V G + F Q I+ A KR N +A+ +
Sbjct: 181 INYPNLTPCIVRGANVIVTGIFTIFKQPDGITAACKRFNAEAANAMQL 228
>gi|223983522|ref|ZP_03633707.1| hypothetical protein HOLDEFILI_00988 [Holdemania filiformis DSM
12042]
gi|223964517|gb|EEF68844.1| hypothetical protein HOLDEFILI_00988 [Holdemania filiformis DSM
12042]
Length = 209
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 66/212 (31%), Positives = 116/212 (54%), Gaps = 3/212 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PSI +AD R+ EE+ I G ++H D+ DG F+PNI+FG +R L D V
Sbjct: 1 MKVYPSIASADPLRIAEELDKIR--GHPRVHVDIEDGNFLPNITFGQKTVRKLMQNPDFV 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+D HL+ + + I+D I FH E+S + R + I MG K G+A+N +T +
Sbjct: 59 YDLHLLTTRPYEFLQQISDCHFSHICFHFEASAYPLREINLIRKMGAKPGIALNFKTGIR 118
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L + +I+ +LIMT P ++ S + K+++A+ + + ++ + DGG+ NI
Sbjct: 119 ELTPFLSQIEYLLIMTAEPDGEEEKFQSSMLEKMKEAREYLPQ-NVEIWADGGINEGNIY 177
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L +AGAD +++G + +N + +R +
Sbjct: 178 QLKEAGADAMIMGRAVWNCDNPLESIRRFEKI 209
>gi|152970252|ref|YP_001335361.1| allulose-6-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262044265|ref|ZP_06017331.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|150955101|gb|ABR77131.1| putative ribulose-phosphate 3-epimerase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|259038324|gb|EEW39529.1| ribulose-phosphate 3-epimerase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 218
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 66/203 (32%), Positives = 106/203 (52%), Gaps = 5/203 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D +L E++ + + A ++H D+MDG +V N++ A + +R Y+ D HLM+ +
Sbjct: 1 MDMMKLTEQLRFL-NSKADRLHVDIMDGHYVKNLALSASFVAQIRPYTSLPIDVHLMVEA 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
S I + DAG D + HPE+ R + + GK+ G+ +NP TPV ++ +
Sbjct: 60 PASFIPALLDAGADAFSLHPETICREAFRVINMLRQAGKEVGMVLNPATPVESIQHYLHL 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAG 190
+D + +MTV+PG+ GQ I + KI Q L S+ LEVDG ++L+ AG
Sbjct: 120 LDKVTVMTVDPGYAGQPFIPEMLAKITQLHQLKETGSLRFLLEVDGSCNRNTYRALLGAG 179
Query: 191 ADLLVVGSS-FFNQKGEISYAKR 212
A +LV+GSS F + A
Sbjct: 180 AQILVMGSSGLFRADMPLELAWE 202
>gi|227878217|ref|ZP_03996189.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus JV-V01]
gi|227862181|gb|EEJ69728.1| ribulose-phosphate 3-epimerase [Lactobacillus crispatus JV-V01]
Length = 216
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 4/216 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I S+ + + E + + KA +H DVMD FVP I FG++ + + Y+D
Sbjct: 2 VKIATSLHSGPKLHMSEILDQLKKADVDLLHIDVMDSIFVPEIDFGSNFTKEISQYTDIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+++ IN A + I H E++ + R L I + KK V INP TP+
Sbjct: 62 LDIHMMVNNPSRLINEYALSTTTDIGIHYEATQQLHRDLFQIKQLNKKAEVIINPGTPIN 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L V++ +D I++M+V+PG G+ I KI++ L +++ +E DGG+T +
Sbjct: 122 SLSAVLNFVDQIMVMSVDPGCSGKSPFIPEVASKIKKLNQLRKEKNYHYLIEADGGITDK 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
N+K LV G D+ V GS FN ++L ++K
Sbjct: 182 NLKVLVDNGLDIAVSGSFIFNG-DIRQQVQKLKEIK 216
>gi|257884980|ref|ZP_05664633.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,501]
gi|257820818|gb|EEV47966.1| ribulose-phosphate 3-epimerase [Enterococcus faecium 1,231,501]
Length = 221
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 8/216 (3%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMI 71
+ D + L I + G +H DV+DG F P++ G + I+ +R + FD H+M
Sbjct: 1 MCGDLANLEGSIQELESIGMDSLHIDVIDGSFSPSMPLGIETIKRIREITSMNFDVHIMA 60
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+ I + G + ITFH E+SPHI R ++ I G K G+A+NP TP+ +L+ ++
Sbjct: 61 KDNEFFIGEMLKIGVESITFHYETSPHIDRYIQLIKNSGTKVGIALNPATPLNVLQYILP 120
Query: 132 EIDMILIMTVNPGFG---GQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSL 186
EID I +M +NPGF ++ I + KI L+ ++ + ++VDG V+ I L
Sbjct: 121 EIDRICLMLINPGFATNKSEKQISYALKKITDLCQLVNEKELAVDIQVDGRVSLETIPGL 180
Query: 187 VQAGADLLVVGS-SFFNQKGEISYAKRL--NDLKKS 219
+ AGA LV+GS S F + ++ ++L +K+S
Sbjct: 181 LDAGATNLVLGSTSLFLKGNTLAENQKLLYQAMKQS 216
>gi|302414012|ref|XP_003004838.1| ribulose-phosphate 3-epimerase [Verticillium albo-atrum VaMs.102]
gi|261355907|gb|EEY18335.1| ribulose-phosphate 3-epimerase [Verticillium albo-atrum VaMs.102]
Length = 214
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 52/236 (22%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P I PSILAADF+ LG + V + +
Sbjct: 1 MAPKAIIAPSILAADFADLGHD-----------------------------HVQQPTEKF 31
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH---------------IRRSLRT 105
+ FDCH+MI+ + +AGCD+ FH E++ + ++
Sbjct: 32 AKGTFDCHMMIAEPKKWVKEFKNAGCDLYCFHYEAAHSSDAESPETTSDNKTSPKALIKY 91
Query: 106 IHAMGKKTGVAINPETPVAILEDVID------EIDMILIMTVNPGFGGQQLIESTIPKIR 159
IH G G+A+ P T V +L ++++ DM+LIMTV PGFGGQ+ + S +PK++
Sbjct: 92 IHQQGMLAGIALKPATSVDVLWEILENPNQDERPDMVLIMTVEPGFGGQKFMASELPKVQ 151
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +++EVDGG+ I AGA+++V GS+ F K L D
Sbjct: 152 ALRE--KYPDLNIEVDGGLGPGTIDQAADAGANVIVAGSAVFGAKDPAEVISLLRD 205
>gi|269122712|ref|YP_003310889.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268616590|gb|ACZ10958.1| Ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 220
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 2/215 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q SI+ AD L +E+ + KA K +H DVMDG FV N++ G ++ ++ +D
Sbjct: 3 QFAASIMCADQMNLKKELEELEKAEIKLLHCDVMDGIFVDNMAMGPYILEEIKKNTDIPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL + ++ + + I+FH E+S + + + + G +AI+P+TP++
Sbjct: 63 DIHLAAITPLKYMKMYSAIKPKYISFHIETSENPEKEIEFLRENGISPSLAISPQTPISE 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNI 183
+ + +DM+LIMTVNPGF GQ S I K+++ + + +EVDG + I
Sbjct: 123 IVKYLSLVDMLLIMTVNPGFAGQPFNYSVIEKLKELNICLRDLENPPLIEVDGNINKNTI 182
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + A + V+G+S +Y +++ D+KK
Sbjct: 183 PILYKNNASVYVLGTSALFNNTPGTYREKIEDMKK 217
>gi|157692525|ref|YP_001486987.1| allulose-6-phosphate 3-epimerase [Bacillus pumilus SAFR-032]
gi|157681283|gb|ABV62427.1| ribulose-phosphate 3-epimerase [Bacillus pumilus SAFR-032]
Length = 230
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S PS++ D + E I +I A + H DVMDG +V NI+ I LR +D
Sbjct: 2 SAIFSPSLMCMDLTHFREHI-HILNTRADRYHVDVMDGHYVKNITLSPFFIEQLRKLTDK 60
Query: 64 VFDCHLMISSI-DSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINPET 121
D HLM S + I+ DAG ++ HPE + R +R IH + G +NP T
Sbjct: 61 PIDVHLMAESPQEFLIDACIDAGASMVCLHPEVVQRDVFRIIRHIHQRDCEVGFVLNPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI--RQAKALIGKRSISLEVDGGVT 179
P+A+L+ + ID + IMT++PGF GQ I+ + KI + S S+EVDG
Sbjct: 121 PIAVLDSYLHLIDRVTIMTIDPGFAGQPFIKEMLQKIKQVKEVKEKKGYSFSIEVDGSCN 180
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKR 212
+ L +AG ++ ++G S F ++ A
Sbjct: 181 EHTFRQLAEAGNEIYIIGNSGLFGLHQQLDTAWE 214
>gi|118575292|ref|YP_875035.1| transketolase, N-terminal subunit [Cenarchaeum symbiosum A]
gi|118193813|gb|ABK76731.1| transketolase, N-terminal subunit [Cenarchaeum symbiosum A]
Length = 504
Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 81/227 (35%), Positives = 109/227 (48%), Gaps = 15/227 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSI+A D + L E+ + GA IH DVMDG FVPN +F + IR LR + + FD
Sbjct: 243 IAPSIIAGDMTDLSGEVRRCAEGGADYIHLDVMDGRFVPNKTFDHEKIRELRPITQTPFD 302
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSP-----HIRRSLRTIHAMGKKTGVAINPET 121
HLMI HI A+AG DIIT H E+ I + G+A+NP T
Sbjct: 303 THLMIDEPGRHIREYAEAGSDIITVHAEACDSSTFGEIH---DYLRDNLVGVGLAVNPGT 359
Query: 122 PVAIL-EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
+ ID ++IM+V PG GQ+ IE T K + + +E DGGV
Sbjct: 360 ELPPWAAKFAPTIDQVIIMSVVPGKSGQKYIEDTHAKASRMAEQLAGHGFEGVIEADGGV 419
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA----KRLNDLKKSAL 221
T +NI S GA V GS+ Q+ S + L D +++ L
Sbjct: 420 TEQNIGSCFTDGARAFVGGSAIVGQRDISSAITGFREALADARRTML 466
>gi|238853611|ref|ZP_04643980.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 202-4]
gi|238833755|gb|EEQ26023.1| ribulose-phosphate 3-epimerase [Lactobacillus gasseri 202-4]
Length = 219
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I S+ + L + + + A A +H DVMDG FVP I FGA + + YS+
Sbjct: 2 VKIAVSLHSGPKLHLSKTLDLLKSAKADYLHIDVMDGSFVPEIDFGASLTHEIAQYSNIP 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H+M+++ I + I H E++ I R L I + KK V+INP TP+
Sbjct: 62 LDIHMMVNNPIRLIKHYDFPTTNSIGIHVEATQQIHRDLYFIKQLNKKAEVSINPGTPIT 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALI--GKRSISLEVDGGVTSR 181
L ++D +D I++M+V+PG G+ I +I++ L + +EVDGG+T +
Sbjct: 122 ALYPILDLVDQIMVMSVDPGCSGKSPFISEVSTRIKELNQLRIDNDYNYQIEVDGGITEQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
N+ L+ G D V GS F ++L +
Sbjct: 182 NLSPLIDDGLDTAVSGSFVFQGNNIKGQIQKLKN 215
>gi|329297515|ref|ZP_08254851.1| allulose-6-phosphate 3-epimerase [Plautia stali symbiont]
Length = 219
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 7/210 (3%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
+ + ++ + + A +H D+MDG +V NI+ I +R ++ D HLM+
Sbjct: 1 MNLMEIKHQL-AVLDSRADFLHIDIMDGHYVKNITLSPFFIEQIRPHTKVAIDMHLMVEE 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
I +A+AG D I H E+ + R + I + GKK GV +NP TPV+ + I
Sbjct: 60 PTDFIEAMANAGADYICPHAETINRDAFRVINLIRSYGKKVGVVLNPATPVSFIHHYIHL 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAG 190
+D I +MTV+PG+ GQ I + K+++ KAL +E+DG +R +LV AG
Sbjct: 120 LDKITVMTVDPGYTGQPFIPEMVQKVQELKALKQAHGHRYLIEIDGSCNTRTYNTLVGAG 179
Query: 191 ADLLVVG-SSFFNQKGEISYAKRLNDLKKS 219
A +++VG S FN +++ A + +++S
Sbjct: 180 AKVMIVGTSGLFNIHEDLATAWNM--MRES 207
>gi|161527807|ref|YP_001581633.1| ribulose-phosphate 3-epimerase [Nitrosopumilus maritimus SCM1]
gi|160339108|gb|ABX12195.1| ribulose-phosphate 3-epimerase [Nitrosopumilus maritimus SCM1]
Length = 555
Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats.
Identities = 77/227 (33%), Positives = 106/227 (46%), Gaps = 14/227 (6%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSI+A D S L E+ A IH DVMDG FVPN +F I+ LR +
Sbjct: 290 QFMIAPSIIAGDMSNLENEVKRCVSGRADYIHLDVMDGQFVPNKTFDHIKIKELRPLTVI 349
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSP-----HIRRSLRTIHAMGKKTGVAIN 118
FD HLMI+ H+ DAG DIIT H E + I L G AIN
Sbjct: 350 PFDSHLMINEPVKHVRDYIDAGSDIITVHAEVTDESSFGEIHDVL---KQNQVGIGFAIN 406
Query: 119 PETPVAILED-VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P+T + I +D +++M+V PG GQ+ IE T K+ + ++ + + S +E D
Sbjct: 407 PDTELPEWSYKFIPSLDQLIVMSVVPGKSGQKYIEETHAKMARLNTILNEHNFSGYIEAD 466
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
GGV NI S+ GA V G + Q+ + D + L+
Sbjct: 467 GGVNLENIGSVFADGARAFVGGGAIIGQQD---VRAAIRDFRTEVLS 510
>gi|269122336|ref|YP_003310513.1| ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
gi|268616214|gb|ACZ10582.1| Ribulose-phosphate 3-epimerase [Sebaldella termitidis ATCC 33386]
Length = 209
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 3/210 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I+PSI +A + +E+ I + +H D+ DG F+PNI+FG +R +R
Sbjct: 1 MKILPSIASASQYNIEKELGRIGSRYYENLHIDIEDGNFIPNITFGLKTVRQIRENYKLP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
F HLM+S+ +++IN + + GC II H ES ++ L I ++G + G+A+NP + +
Sbjct: 61 FSVHLMVSNPENYINELKNTGCCIIFIHVESCRYLSEVLNKIKSLGIRAGIALNPCSDLK 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ D ++ MT P F GQ + + I +A +G++ + L VDGGV +++
Sbjct: 121 NYRYLFGITDAVMFMTSEPDFRGQIFNPAVLENIEEA---LGEKRLELWVDGGVKEEHLE 177
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L + D V+G F+++ + KR+N
Sbjct: 178 FLKKKQIDYAVMGREIFDRENPEDFLKRIN 207
>gi|319777628|ref|YP_004137279.1| ribulose-phosphate 3-epimerase [Mycoplasma fermentans M64]
gi|318038703|gb|ADV34902.1| Ribulose-phosphate 3-epimerase [Mycoplasma fermentans M64]
Length = 220
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 1 MTPSIQ-IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M + + PS+L + + E + + G K IH+DVMDG FVPN + D I+++
Sbjct: 1 MNKKEKYVTPSLLNVEKDKRCEMATLLVNNGIKWIHYDVMDGKFVPNTAIELDEIKNINK 60
Query: 60 Y-SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG--KKTGVA 116
D HLM+ + +++ D DI T H E+ + L+ + G+A
Sbjct: 61 NAPKHFKDAHLMVENPLDYLDEFRD-HVDITTIHYEAVNK-KELLQFLKDHHSAYSIGLA 118
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
I P T V + ++ + ++L+M+V PG GGQ+ IE + KIR+ K L K ++V
Sbjct: 119 IKPATEVKEIVKILPYLQLVLVMSVEPGKGGQKFIEHAVDKIRELKQLRDKNGYKYLIQV 178
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
DGG+ AG D V G+ ++ + A
Sbjct: 179 DGGINGETGPRCFAAGVDATVAGTYIVSEPTKERIA 214
>gi|330006127|ref|ZP_08305526.1| D-allulose-6-phosphate 3-epimerase [Klebsiella sp. MS 92-3]
gi|328535943|gb|EGF62365.1| D-allulose-6-phosphate 3-epimerase [Klebsiella sp. MS 92-3]
Length = 218
Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + E++ + + A ++H D+MDG +V N++ A + +R Y+ D HLM+ +
Sbjct: 1 MDMMKRTEQLRFL-NSKADRLHVDIMDGHYVKNLALSASFVAQIRPYTSLPIDVHLMVEA 59
Query: 74 IDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
S I + DAG D + HPE+ R + + GK+ G+ +NP TPV ++ +
Sbjct: 60 PASFIPALLDAGADAFSLHPETICREAFRVINMLRQAGKEVGMVLNPATPVESIQHYLHL 119
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAG 190
+D + +MTV+PG+ GQ I + KI Q L S+ LEVDG ++L+ AG
Sbjct: 120 LDKVTVMTVDPGYAGQPFIPEMLAKITQLHQLKETGSLRFLLEVDGSCNRNTYRALLGAG 179
Query: 191 ADLLVVGSS-FFNQKGEISYAKR 212
A +LV+GSS F + A
Sbjct: 180 AQILVMGSSGLFRADMPLELAWE 202
>gi|238809982|dbj|BAH69772.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 222
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 1 MTPSIQ-IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M + + PS+L + + E + + G K IH+DVMDG FVPN + D I+++
Sbjct: 3 MNKKEKYVTPSLLNVEKDKRCEMATLLVNNGIKWIHYDVMDGKFVPNTAIELDEIKNINK 62
Query: 60 Y-SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG--KKTGVA 116
D HLM+ + +++ D DI T H E+ + L+ + G+A
Sbjct: 63 NAPKHFKDAHLMVENPLDYLDEFRD-HVDITTIHYEAVNK-KELLQFLKDHHSAYSIGLA 120
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
I P T V + ++ + ++L+M+V PG GGQ+ IE + KIR+ K L K ++V
Sbjct: 121 IKPATEVKEIVKILPYLQLVLVMSVEPGKGGQKFIEHAVDKIRELKQLRDKNGYKYLIQV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
DGG+ AG D V G+ ++ + A
Sbjct: 181 DGGINGETGPRCFAAGVDATVAGTYIVSEPTKERIA 216
>gi|150007987|ref|YP_001302730.1| ribulose-phosphate 3-epimerase [Parabacteroides distasonis ATCC
8503]
gi|149936411|gb|ABR43108.1| ribulose-phosphate 3-epimerase [Parabacteroides distasonis ATCC
8503]
Length = 223
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 4/207 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M ++ S++ AD L +I + + G +H D+MD FVPN++FG DV+ S+R
Sbjct: 1 MNRISKLSVSLMCADLVNLERDIHILEENGVDYLHVDIMDAAFVPNLTFGPDVVNSIRKI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ D HL++ + I + DI++ H E + + I G K G+A+NP+
Sbjct: 61 TGLPVDIHLLMEHPRTIIRSMDIRDGDIVSIHSECKESVLENAAFIKQRGAKFGLALNPD 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI---SLEVDGG 177
T + + + +D+IL+M + PGF G +I + K+ + + + + + + VDG
Sbjct: 121 TSIDEVRKYLPYVDVILLMLIVPGFAGTMMIHGMMEKVGETRQYLDQHNYGNVEICVDGS 180
Query: 178 VTSRNIKSLVQAGADLLVVGSS-FFNQ 203
V++ K + Q GA + V G++ F Q
Sbjct: 181 VSTERAKYMRQLGASIFVGGTAGIFKQ 207
>gi|57234554|ref|YP_181418.1| ribulose-phosphate 3-epimerase, putative [Dehalococcoides
ethenogenes 195]
gi|57234619|ref|YP_181384.1| ribulose-phosphate 3-epimerase, putative [Dehalococcoides
ethenogenes 195]
gi|57225002|gb|AAW40059.1| ribulose-phosphate 3-epimerase, putative [Dehalococcoides
ethenogenes 195]
gi|57225067|gb|AAW40124.1| ribulose-phosphate 3-epimerase, putative [Dehalococcoides
ethenogenes 195]
Length = 220
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 5/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++IVP++L D + ++ + + A D+MDG FVP++S +V+ +
Sbjct: 1 MKDVKIVPAVLTDDPAAFECMLNQLE-SFAPSAQIDIMDGQFVPSLSIPPEVLGRYKPR- 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM + + ++ G + FH E++ + I +G + G+A+NPET
Sbjct: 59 -FASEIHLMTLNPEEYLTYCKQHGAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPET 117
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV+ ++ ++DM+L M+V PGF G I + K+++ K + I L DGG
Sbjct: 118 PVSDFAYLVPQLDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGL--DGGAKEG 175
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI +V AG + + VGS+ F Q S L+ L K+A
Sbjct: 176 NIPEIVAAGVNDICVGSAIFRQTDPKSSYLYLDKLAKNA 214
>gi|255023607|ref|ZP_05295593.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J1-208]
Length = 156
Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 69/153 (45%), Positives = 101/153 (66%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEHAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVL 123
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR 159
+ V+ ++D++L MTVNPGFGGQ I+STI +R
Sbjct: 124 DAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMR 156
>gi|193788335|dbj|BAG53229.1| unnamed protein product [Homo sapiens]
Length = 198
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I SIL +D + LG E + +GA +H DVMDG FVPNI+FG
Sbjct: 1 MASGCKIGSSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHP-------- 52
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
FD H+M+S + + +A AG + TFH E++ + ++ I G K+ E
Sbjct: 53 ---FFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAE 109
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ + + + + PG + + S+ +EVDGGV
Sbjct: 110 V------QWHSQGPLQVGLAIKPGTS-----------VHWLRTQF--PSLDIEVDGGVGP 150
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+++V GS+ + S L +
Sbjct: 151 DTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 185
>gi|261368528|ref|ZP_05981411.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
gi|282569410|gb|EFB74945.1| ribulose-phosphate 3-epimerase [Subdoligranulum variabile DSM
15176]
Length = 226
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S ++ PSILAADFS L ++ AGA H D+MDG FVP ISFG ++R++R+ +
Sbjct: 10 SFELCPSILAADFSCLARDVQAADAAGADAFHIDIMDGHFVPAISFGPGMVRTMRALTRK 69
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + +A G + ++ H E +L I A G + G+ +NPETPV
Sbjct: 70 PLDVHLMVDRPLDLVAELAALGVERVSVHAEVPGGPGAALAAIRAAGMQGGLVLNPETPV 129
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSR 181
+ I +L+MTV PG GGQ + + +I A+AL+ ++++VDGG+T+R
Sbjct: 130 ETAGAYLPLISQLLLMTVQPGRGGQPYLPGSNARIAAAQALLQTAPHPVTIQVDGGITAR 189
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ AGA +V GS+ F + A+ + L++S
Sbjct: 190 TLPGAWAAGARSVVAGSAVF----DGDIARNIAVLRRS 223
>gi|218133533|ref|ZP_03462337.1| hypothetical protein BACPEC_01400 [Bacteroides pectinophilus ATCC
43243]
gi|217990908|gb|EEC56914.1| hypothetical protein BACPEC_01400 [Bacteroides pectinophilus ATCC
43243]
Length = 224
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ S++ AD+ L EI + G H D+MDG +VPN + + +R + +D
Sbjct: 2 QFELTASMMCADYGHLEREIRELEMGGIDSFHIDIMDGRYVPNFAMSLNDMRYIAGATDK 61
Query: 64 VFDCHLMISSIDSHINIIAD--AGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D HLMI ++HI + D + HPE+ H +L+TI G G+AINP T
Sbjct: 62 PLDVHLMIEHPNTHIGLFLKNLRRGDTVYIHPEAEYHPSTTLQTIIDAGMIPGIAINPGT 121
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V + +++ + +L+M+VNPG GQ + KI + +L + DG +++
Sbjct: 122 SVETVFEMLRIVKKVLVMSVNPGNAGQMYLPYVGHKIDKLLSLKEDMDFEMYWDGACSAQ 181
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I G V+G++ K Y + D++
Sbjct: 182 RITEFAPKGMKGFVLGTTLLFGKDRP-YKDIIEDIRN 217
>gi|47459396|ref|YP_016258.1| ribulose-phosphate 3-epimerase [Mycoplasma mobile 163K]
gi|47458726|gb|AAT28047.1| ribulose-5-phosphate 3-epimerase [Mycoplasma mobile 163K]
Length = 218
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 63/199 (31%), Positives = 113/199 (56%), Gaps = 7/199 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PS+L + S+ E + + + G K IH+D MDG FVP + + ++ S S
Sbjct: 4 ISPSLLNVEESKRAEIATKMIELGIKWIHYDFMDGKFVPETAISFENYMEIKEKSPSHIK 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPETPV 123
D HLM+ + ++ + + ITFH E+ + I++ L+ H + K G+A+ P+T +
Sbjct: 64 DIHLMVQDVSFYVEKFLN-KAEYITFHFEALNYNEIKKILKKYHGLQK-FGIALKPKTNI 121
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ + + +D++LIM+V PG+GGQ+ I +++ KI + K + +RS+ ++VDGG+
Sbjct: 122 EQIYEYLPYVDLVLIMSVEPGYGGQKFIPNSLEKITKLKKYLLERSLDIVIQVDGGINEE 181
Query: 182 NIKSLVQAGADLLVVGSSF 200
+ ++GAD+LV GS
Sbjct: 182 SGPQAFESGADILVSGSYL 200
>gi|74005313|ref|XP_861291.1| PREDICTED: similar to Ribulose-phosphate 3-epimerase
(Ribulose-5-phosphate-3-epimerase) (HUSSY-17) isoform 4
[Canis familiaris]
Length = 183
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 90/217 (41%), Gaps = 49/217 (22%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGM------- 113
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
K+ + S+ +EVDGGV
Sbjct: 114 --------------------------------------KVHWLRTQF--PSLDIEVDGGV 133
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I +AGA+++V GS+ S L +
Sbjct: 134 GPDTIHKCAEAGANMIVSGSAIMRSDDPRSVINLLRN 170
>gi|154503068|ref|ZP_02040128.1| hypothetical protein RUMGNA_00891 [Ruminococcus gnavus ATCC 29149]
gi|153796309|gb|EDN78729.1| hypothetical protein RUMGNA_00891 [Ruminococcus gnavus ATCC 29149]
Length = 203
Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 19 LGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHI 78
L +EI + +GA +H DVMDG +VPN I ++R + D H+M+ + +I
Sbjct: 4 LKDEIMRLDVSGADILHIDVMDGHYVPNFGMSFQDIETIRKNTSLKLDVHMMMYNPGRYI 63
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
A+ G DII HP+S +L I +GK G+ INP + +++++ +D +L+
Sbjct: 64 ERYAEFGADIIYIHPDSETIPTETLCRIRKLGKAPGIVINPGISLDSIQELLSLVDYVLV 123
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
MTVNPGF G+ + PKI Q L + + +DGGVT ++ L + G + V+G
Sbjct: 124 MTVNPGFAGRDYLHFVEPKIEQLLKLRQRYKFHIVIDGGVTWEILERLWKKGVEGFVLGK 183
Query: 199 SFFNQKGEISYAKRLNDLKK 218
+K E Y + ++
Sbjct: 184 QILFEKNE-DYRTIIQKVRN 202
>gi|306822314|ref|ZP_07455695.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|309802837|ref|ZP_07696939.1| putative ribulose-phosphate 3-epimerase [Bifidobacterium dentium
JCVIHMP022]
gi|304554476|gb|EFM42382.1| ribulose-phosphate 3-epimerase [Bifidobacterium dentium ATCC 27679]
gi|308220590|gb|EFO76900.1| putative ribulose-phosphate 3-epimerase [Bifidobacterium dentium
JCVIHMP022]
Length = 235
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 5/209 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +DF ++ + A H D+MDG F P++ I + + H+
Sbjct: 13 SLYCSDFRNPAAQVE-VLNNYADSYHVDIMDGHFSPSMGLCTTWIEQMMPLCTLRKEVHM 71
Query: 70 MISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M++ ID I+ + AG ++T H ES H R+LR I G G+A+NP T + +E+
Sbjct: 72 MVTDIDHWIDQLVAAGATMLTPHVESLGAHAFRTLRIIRENGCGAGIAVNPLTSFSEMEN 131
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL 186
+++ ID++ +MTV G+ G+ LI T+ KI + ++ +++DG +N K +
Sbjct: 132 LLERIDLVTVMTVEIGYSGEPLIPETLKKIERLAQFRDAHGLNYEIQIDGSCNEKNFKRM 191
Query: 187 VQAGADLLVVG-SSFFNQKGEISYAKRLN 214
+ GAD V+G + F + +I A +
Sbjct: 192 REVGADTFVLGNTGIFKRSPDIEEAWHMT 220
>gi|217073160|gb|ACJ84939.1| unknown [Medicago truncatula]
Length = 201
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 65/147 (44%), Positives = 96/147 (65%), Gaps = 2/147 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ G V+ +LR +
Sbjct: 55 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT 114
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINP 119
D D HLMI D + AG DI++ H E S+ H+ R++ + ++G K GV +NP
Sbjct: 115 DLPLDVHLMIVEPDQRVPDFIKAGADIVSIHCEQSSTIHLHRAINQVKSLGAKAGVVLNP 174
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFG 146
TP++ +E V+D +D++LIM+VNPGFG
Sbjct: 175 GTPLSAIEYVLDVVDLVLIMSVNPGFG 201
>gi|308190260|ref|YP_003923191.1| ribulose-phosphate 3-epimerase [Mycoplasma fermentans JER]
gi|307625002|gb|ADN69307.1| ribulose-phosphate 3-epimerase [Mycoplasma fermentans JER]
Length = 220
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 8/216 (3%)
Query: 1 MTPSIQ-IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M + + PS+L + + E + + G K IH+DVMDG FVPN + D I+++
Sbjct: 1 MNKKEKYVTPSLLNVEKDKRCEMATLLVNNGIKWIHYDVMDGKFVPNTAIELDEIKNINK 60
Query: 60 Y-SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG--KKTGVA 116
D HLM+ + +++ D DI T H E+ + L+ + G+A
Sbjct: 61 NAPKHFKDAHLMVENPLDYLDEFRD-HVDITTIHYEAVNK-KELLQFLKDHHSAYSIGLA 118
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
I P T V + ++ + ++L+M+V PG GGQ+ I+ + KIR+ K L K ++V
Sbjct: 119 IKPATEVKEIVKMLPYLQLVLVMSVEPGKGGQKFIDHAVDKIRELKQLRDKNGYKYLIQV 178
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
DGG+ AG D V G+ ++ + A
Sbjct: 179 DGGINGETGPRCFAAGVDATVAGTYIVSEPTKERIA 214
>gi|315305657|ref|ZP_07875303.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
gi|313625974|gb|EFR95460.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
Length = 165
Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 2/165 (1%)
Query: 53 VIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
++ + + D HLM+++ +++I A AG II+ H E++PHI R ++ I G K
Sbjct: 1 MVEQIGKTATIPLDVHLMLANPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKQAGCK 60
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SI 170
GV +NP TP ++LE V+ ++D++L MTVNPGFGGQ IESTI +R K S
Sbjct: 61 AGVVLNPGTPASMLEAVLGDVDLVLQMTVNPGFGGQTFIESTIENMRYLDNWRRKNRGSY 120
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
S+EVDGGV ++ QAG D+LV GS FF + + K L
Sbjct: 121 SIEVDGGVNKATAETCKQAGVDILVAGSYFFRAIDKAACVKTLKS 165
>gi|226470368|emb|CAX70464.1| hypotherical protein [Schistosoma japonicum]
Length = 185
Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 92/159 (57%), Gaps = 2/159 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY- 60
+ I I PSIL AD S+L N+ +GA +H D+MDG FVPNI+ G V+ SL+ +
Sbjct: 6 SKPILIGPSILNADLSQLAVVCDNLLNSGADYLHLDIMDGHFVPNITIGHPVVASLKKHL 65
Query: 61 -SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+ D H+M+S + + + AG TFH ESS + ++ I K G+ I P
Sbjct: 66 PCKAFLDLHMMVSDPEKWVENMKAAGASQYTFHFESSKDVMHCIQKIREADMKVGLGIKP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
+TPV + +D +DM+LIMTV PGFGGQ+ + +PK+
Sbjct: 126 KTPVTEVLPYVDLVDMVLIMTVEPGFGGQKFMADMLPKV 164
>gi|309777355|ref|ZP_07672316.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914896|gb|EFP60675.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 226
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 57/221 (25%), Positives = 112/221 (50%), Gaps = 5/221 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I+ PS+ AD+ L +EI + +AGA +H D+MD + I F +I +++
Sbjct: 1 MKRKIKFAPSLERADWLNLEQEIHALEQAGADMLHLDIMDRTYGETILFSPRIIPAIKQI 60
Query: 61 SDSVFDCHLMISSIDSHINIIADA--GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
++ D H+ +S + + + D + E+ + + ++ I G ++I+
Sbjct: 61 TNLPLDIHMYVSDPKVYFDEMFQCLDAHDYVNLEMEAVQDLAKLMQLIREGGSIPAISID 120
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDG 176
+TPV +LE+++ +DM+ ++ + G Q + E + KI Q + L + LEVDG
Sbjct: 121 IQTPVYMLEELVPYVDMVNVIIRSAGCRYQPIREHILEKIAQIRKLFLSQHKQFELEVDG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ ++ LV+ GAD+LV+G+ +K ++Y + L+
Sbjct: 181 SINFKDSVLLVEQGADILVLGTKVIFRKD-LTYKESCQKLR 220
>gi|300087701|ref|YP_003758223.1| ribulose-phosphate 3-epimerase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527434|gb|ADJ25902.1| Ribulose-phosphate 3-epimerase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 217
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I+IVP+IL D L + +I + D+MDG FVP+ S G + IR R
Sbjct: 1 MSP-IRIVPAILTDDPQELTA-MRDIMSGVVDWVQVDIMDGRFVPSRSIGWEEIRDARL- 57
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
++ HLM+ + + AG + + FH E+ G G+A+NPE
Sbjct: 58 -PFGWEAHLMVENPVDYFKGFKAAGAERVIFHYETVSDPSTVTVAAREAGLTVGMAVNPE 116
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T V + +D +D +L+M+V+PGF G + + + KI Q + +++ +DGG+
Sbjct: 117 TSVEDICQWLDSLDHVLLMSVHPGFYGAKFLPEVLAKIEQLRRY--APGLTIGIDGGIKE 174
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
N+ + G D + VGS F + +RL + S
Sbjct: 175 ENLLEVASRGVDDICVGSGVFRATDPAAAFQRLQAMVTS 213
>gi|113205378|gb|AAU93593.2| Ribulose-phosphate 3-epimerase, cytoplasmic isoform, putative
[Solanum demissum]
Length = 273
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 20/185 (10%)
Query: 40 DGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS-PH 98
DG FVPN++ GA +I SLR ++ + DCHLM+++ ++ + AG TFH E+S +
Sbjct: 101 DGHFVPNLTLGAPIIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEASRDN 160
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTI 155
+ ++ I + G K GV++ P TP+ + ++D ++++L+MTV PGFGGQ+ + +
Sbjct: 161 WQELVQKIKSKGMKPGVSLKPGTPIEEVYPLLDGENSVELVLVMTVEPGFGGQKFMPEMM 220
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K VDGG+ I++ AGA+ +V GSS F L
Sbjct: 221 DK----------------VDGGLGPSTIEAATSAGANCIVAGSSVFGAPDPAQVITLLRG 264
Query: 216 LKKSA 220
+ A
Sbjct: 265 SVEEA 269
>gi|169335419|ref|ZP_02862612.1| hypothetical protein ANASTE_01831 [Anaerofustis stercorihominis DSM
17244]
gi|169258157|gb|EDS72123.1| hypothetical protein ANASTE_01831 [Anaerofustis stercorihominis DSM
17244]
Length = 222
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+I PS++ D + +I + H D++DG + N SF ++++R + +
Sbjct: 2 KYKISPSLMCMDLLNIESQIKTLNP-YVYSYHVDIIDGVYFKNFSFTPPFMKAVRKVTSA 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETP 122
D H+M+ ++ + D G D ++ H E + R+ + +HA K+ GV ++PE
Sbjct: 61 KLDAHVMLVDPFYYLEEMVDCGADCVSIHSEKLINEAFRTSKFLHARNKEFGVVLSPEVC 120
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
L I E+D I +MT PGF G I T+ KI Q + ++ + +EVDG V
Sbjct: 121 AETLLPYISEVDKITVMTEEPGFAGGDFIPGTLDKINQLVKIREEKDLHFLIEVDGVVNK 180
Query: 181 RNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSALA 222
+ K +AG D+ +VG F+ ++ A ++ LK+ A
Sbjct: 181 EHFKEYKEAGVDIYIVGNRGLFSLHEDLDTAVKMT-LKQIEEA 222
>gi|323304444|gb|EGA58215.1| Rpe1p [Saccharomyces cerevisiae FostersB]
Length = 214
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 14/163 (8%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-- 58
M I I PSILA+DF+ LG E + AGA +H DVMDG FVPNI+ G ++ SLR
Sbjct: 1 MVKPI-IAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRS 59
Query: 59 -----------SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
+ FDCH+M+ + + + A G D TFH E++ ++ I
Sbjct: 60 VPRPGDASNTEKKPTAFFDCHMMVENPEKWXDDFAKCGADQFTFHYEATQDPLHLVKLIK 119
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
+ G K AI P T V +L ++ +DM L+MTV PGF ++
Sbjct: 120 SKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFWRPKI 162
>gi|193216942|ref|YP_002000184.1| ribulose-phosphate 3-epimerase [Mycoplasma arthritidis 158L3-1]
gi|193002265|gb|ACF07480.1| ribulose-phosphate 3-epimerase [Mycoplasma arthritidis 158L3-1]
Length = 215
Score = 184 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 70/214 (32%), Positives = 111/214 (51%), Gaps = 9/214 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDSV 64
+I PSIL L + + G +H+DVMD FVPN++ I+ ++ S +
Sbjct: 3 KISPSILDVKKENLVNYVQQLIDWGVVNVHYDVMDNIFVPNVALQYKEIKEIKEKCSRHI 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + + + G DI+TFH E+ ++ + K G+AI P TP
Sbjct: 63 MDIHLMVKDVFGYYEMYKKLG-DILTFHFEAMSQDDLQNLIALAKKDQTKLGLAIKPNTP 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V + + + ++LIM+V PGFGGQ+ IE++ K+++ I + + +++DGGV
Sbjct: 122 VEAIIPYLKHLSLLLIMSVEPGFGGQKFIENSYDKVKKLSDYIKQNHLDCIIQIDGGVND 181
Query: 181 RNIKSLVQAGADLLVVGSSF---FNQKGEISYAK 211
+NIK AG +L VVGS FNQ+ S K
Sbjct: 182 QNIKYCYDAGVNLAVVGSFLVKNFNQEVIKSLIK 215
>gi|47226986|emb|CAG05878.1| unnamed protein product [Tetraodon nigroviridis]
Length = 183
Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 93/223 (41%), Gaps = 49/223 (21%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + +I PSIL++D S LG E + + GA +H DVMDG FVPNI+FG ++ LR
Sbjct: 1 MAYNAKIGPSILSSDLSCLGSECVRMMECGADYLHLDVMDGHFVPNITFGHPMVECLRKS 60
Query: 61 S--DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D FD H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 61 VGQDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLEATTNPGNLIKDIKESGM------- 113
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
K+ ++ S+ +EVDGGV
Sbjct: 114 --------------------------------------KVSWLRSQF--PSLDIEVDGGV 133
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +AGA+++V GS+ S L A+
Sbjct: 134 GPDTVHKCAEAGANMIVSGSAVIGSDDPRSVIALLRTAVAEAI 176
>gi|147669259|ref|YP_001214077.1| ribulose-phosphate 3-epimerase [Dehalococcoides sp. BAV1]
gi|146270207|gb|ABQ17199.1| Ribulose-phosphate 3-epimerase [Dehalococcoides sp. BAV1]
Length = 220
Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++VP+IL D + I ++ A D+MDG FVP++S +V+ +
Sbjct: 1 MKDVKVVPAILTDDPAAFESMIKQ-SEGFAPVAQIDIMDGQFVPSLSIPPEVLGRYKPC- 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM + + ++ G + FH E++P + I MG K G+A+NPET
Sbjct: 59 -FASEIHLMTLNPEEYLTYCKQHGARRVIFHFEATPRPEYVISRIKEMGFKVGLAVNPET 117
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
VA ++ ++DM+L M+V PGF G I + K+++ K + I L DGG
Sbjct: 118 SVAEFAYLVPQVDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGL--DGGAKQA 175
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI +V AG + + VGS+ F Q S L+ L K++
Sbjct: 176 NIPEIVAAGVNDICVGSAIFRQSDPQSSYLYLDKLAKNS 214
>gi|329765821|ref|ZP_08257387.1| ribulose-phosphate 3-epimerase [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137664|gb|EGG41934.1| ribulose-phosphate 3-epimerase [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 555
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 75/226 (33%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
I PSI+A D + L E+ A IH DVMDG FV +F I+ LR +
Sbjct: 290 QFMIAPSIIAGDMNNLENEVKRCVAGRADYIHLDVMDGQFVQTKTFDHRKIKELRPLTVI 349
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSP-----HIRRSLRTIHAMGKKTGVAIN 118
FD HLMI+ H+ DAG DIIT H E I L G+AIN
Sbjct: 350 PFDTHLMINEPVKHVREYVDAGSDIITIHAEVCNESSFGEIHDLL---KQHQVGVGLAIN 406
Query: 119 PETPVAILED-VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
P+T + + +D +++M+V PG GQ+ IE T K+ + L+ ++ S +E D
Sbjct: 407 PDTELPEWSYRFLPSLDQLIVMSVVPGKSGQKYIEETHGKMTKLNTLLREQKFSGCIEAD 466
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
GGVT NI S GA V GS+ ++ + D + L
Sbjct: 467 GGVTFDNIGSCFLDGARAFVGGSAIIGKQD---VRTAIRDFRNQVL 509
>gi|188025856|ref|ZP_02960067.2| hypothetical protein PROSTU_01971 [Providencia stuartii ATCC 25827]
gi|188020750|gb|EDU58790.1| hypothetical protein PROSTU_01971 [Providencia stuartii ATCC 25827]
Length = 210
Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 113/211 (53%), Gaps = 2/211 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD LG I+ + +H D+ DG F+ NI+FG +++++ ++
Sbjct: 2 MILHPSLASADPLWLGSIINKLANQNIGSLHLDIEDGNFINNITFGIKLVKAVAQATEHA 61
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+S I +A I FHPE+ + + I + K G+A+NP TPVA
Sbjct: 62 LSIHLMVSQPLFWIRELAPFSPKWIFFHPEAVQNPSEIIAEIKKIKAKAGIALNPSTPVA 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ +I+++D +++MT P QQ I S + KI+Q L + + DGG+++ I+
Sbjct: 122 PYQYLINKLDALMLMTSEPDGENQQFIPSIVDKIQQIPPLFSQ--LEYWADGGISADKIQ 179
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
SL + G + LV+G + F+ + K+L++
Sbjct: 180 SLKKVGINNLVIGRALFSTDDYENTIKQLSN 210
>gi|270308001|ref|YP_003330059.1| ribulose-phosphate 3-epimerase-like protein [Dehalococcoides sp.
VS]
gi|270153893|gb|ACZ61731.1| ribulose-phosphate 3-epimerase-like protein [Dehalococcoides sp.
VS]
Length = 220
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++VP+IL D + I ++ A D+MDG FVP++S +V+ +
Sbjct: 1 MKDVKVVPAILTDDPAAFEMMIKQ-SEGFAPSAQIDIMDGQFVPSLSIPPEVLVRYKPR- 58
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM + + ++ G + FH E++ + I +G + G+A+NPET
Sbjct: 59 -FASEIHLMTINPEEYLIYCKRHGAFRVIFHFEATTRPEYVISRIKELGFQAGLAVNPET 117
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV+ ++ ++DM+L M+V PGF G I + + K+++ K + I L DGG
Sbjct: 118 PVSDFAYLVPQLDMVLFMSVIPGFYGAPFIPAVLLKVKEFKLRFPETEIGL--DGGAKEG 175
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI +V AG + + VGS+ F Q S + L++L K+A
Sbjct: 176 NIAEIVAAGVNDICVGSAIFRQTDPKSSYRYLDELAKNA 214
>gi|158314654|ref|YP_001507162.1| ribulose-phosphate 3-epimerase [Frankia sp. EAN1pec]
gi|158110059|gb|ABW12256.1| Ribulose-phosphate 3-epimerase [Frankia sp. EAN1pec]
Length = 246
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + L EI + A HFDV D FVP++ F D++ +LR + F HL
Sbjct: 26 SVWSADLACLRAEIERASPV-ADLFHFDVGDSQFVPDLLFFPDLLAALRPLTTVPFHAHL 84
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+ + A AG D+IT H E+ + +L TI GK G+A+ +TPV +
Sbjct: 85 MVRRPAPLAALFAQAGADLITVHAETGDDVHPALDTIRQHGKAAGLALTLDTPVMAVRPY 144
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS----ISLEVDGGVTSRNIKS 185
+D +D+I+++ G G L + ++R + L+ + + + DGG+ +
Sbjct: 145 LDAVDVIVLVGTPIGTRGTGLAPAAFDRLRTLRGLLHETGRDQAVKILADGGIHQPTVGP 204
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLND 215
L AGAD +V GS F + + L+
Sbjct: 205 LADAGADGVVAGSLLFGSDDLTATIRWLHQ 234
>gi|313678688|ref|YP_004056428.1| ribulose-phosphate 3-epimerase [Mycoplasma bovis PG45]
gi|312950103|gb|ADR24698.1| putative ribulose-phosphate 3-epimerase [Mycoplasma bovis PG45]
Length = 220
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 1 MTPSIQ-IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M + + + PS+L + + + G K IH+DVMDG FVPN + + I+++
Sbjct: 1 MNKNNKYVTPSLLNVEPENRLNMANTLINEGIKWIHYDVMDGKFVPNFAIELNEIKNIHE 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT--GVA 116
S D HLMI + +I+ D DI+T H E+ + L+ + G+A
Sbjct: 61 NSLKHFKDAHLMIENPLDYIDQYKDV-VDIVTVHYEA-IDPTKFLKFLKQKHHDYRLGIA 118
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
I P T V ++ + I ++L+M+V PG GGQ+ I + I KI+ K L + ++V
Sbjct: 119 IKPNTDVEKIKKFLPYIQLVLVMSVEPGKGGQKFIPTAIDKIKMLKQLRINNNYDYLIQV 178
Query: 175 DGGVTSRNIKSLVQAGADLLVVGS 198
DGG+ +AGAD V G+
Sbjct: 179 DGGINDTTGPECFKAGADACVAGT 202
>gi|167770950|ref|ZP_02443003.1| hypothetical protein ANACOL_02304 [Anaerotruncus colihominis DSM
17241]
gi|167666990|gb|EDS11120.1| hypothetical protein ANACOL_02304 [Anaerotruncus colihominis DSM
17241]
Length = 217
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 3/211 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I I PS+ +AD L I + A +H D+ DG FVPNI+FG +R++ Y+
Sbjct: 2 ILIEPSLASADQLNLQTHIDTLKN--APSLHLDIEDGNFVPNITFGLKTVRAVARYAKQR 59
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D HLM+S ++++ + G I H E+ + L+ I G + G+A N P+
Sbjct: 60 LDAHLMVSQPENYVLDLLQMGVHSIAIHIEAGQYPAVQLQAIRKGGGRAGLAFNCMAPIE 119
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ID +LIMT P GQ+ E + KI +A+ L G + + DGG+ +
Sbjct: 120 AGLAYREWIDYLLIMTSEPDGMGQRFNEHILQKISRARTLYG-PEMEIMADGGIGEEQMA 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ GA+++V+G + +N L +
Sbjct: 179 AVAACGANVIVMGRTIWNAPDPQEQYGVLME 209
>gi|73748478|ref|YP_307717.1| putative ribulose-phosphate 3-epimerase [Dehalococcoides sp. CBDB1]
gi|289432526|ref|YP_003462399.1| ribulose-phosphate 3-epimerase [Dehalococcoides sp. GT]
gi|73660194|emb|CAI82801.1| putative ribulose-phosphate 3-epimerase [Dehalococcoides sp. CBDB1]
gi|288946246|gb|ADC73943.1| Ribulose-phosphate 3-epimerase [Dehalococcoides sp. GT]
Length = 220
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+++VP+IL D + I ++ A D+MDG FVP++S +V+ +
Sbjct: 1 MKDVKVVPAILTDDPAAFESMIKQ-SEGFAPVAQIDIMDGQFVPSLSIPPEVLGRYKP-- 57
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ HLM + + ++ G + FH E++P + I MG K G+A+NPET
Sbjct: 58 SFASEIHLMTLNPEEYLTYCKQHGARRVIFHFEATPRPEYVISRIKEMGFKVGLAVNPET 117
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
VA ++ ++DM+L M+V PGF G I + K+++ K + I L DGG
Sbjct: 118 SVAEFAHLVPQVDMVLFMSVIPGFYGAPFIPEVLLKVKEFKRRFPETEIGL--DGGAKQS 175
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
NI +V AG + + VGS+ F Q S L+ L K++
Sbjct: 176 NIPEIVAAGVNDICVGSAIFRQSDPQSSYLYLDKLAKNS 214
>gi|189219849|ref|YP_001940490.1| Pentose-5-phosphate-3-epimerase [Methylacidiphilum infernorum V4]
gi|189186707|gb|ACD83892.1| Pentose-5-phosphate-3-epimerase [Methylacidiphilum infernorum V4]
Length = 225
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 1 MTPSIQIVPSI-LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I++ SI + + L +EI IH DV DG FVPN+S G D I +LRS
Sbjct: 1 MAHPIRL--SINIGINPFLLSKEIKKAEIFNCDSIHVDVTDGHFVPNLSIGPDFIAALRS 58
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
++ + HL+I D ++G D++ H E+ +++++ IH+MG + G+A+NP
Sbjct: 59 MTNLPIEVHLLIQQPDRFARDFVESGADLLIVHMEAHHDVKKTINLIHSMGCRCGLALNP 118
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
T + + ++ +LI+ N + KIR+A+ K +++ + V+GG
Sbjct: 119 LTVFEKSINYLSQLQALLILITNFPSKSHPFQPDKLSKIRKAREFREKNNLNFQILVEGG 178
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++++ I S V AGA+ L++ SSFF + + +
Sbjct: 179 LSAQTIPSTVIAGANTLILESSFFKEDLSMESLSAI 214
>gi|15829154|ref|NP_326514.1| ribulose-phosphate 3-epimerase [Mycoplasma pulmonis UAB CTIP]
gi|14090098|emb|CAC13856.1| RIBULOSE-PHOSPHATE 3-EPIMERASE (PENTOSE-5-PHOSPHATE 3-EPIMERASE)
(PPE) (R5P3E) [Mycoplasma pulmonis]
Length = 215
Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF- 65
I PS+L + + + + G K IH+DVMDG FVPN + + I +++ +
Sbjct: 4 IAPSLLNLKKDQRLNIANELLENGIKWIHYDVMDGKFVPNHAIEIEEIIHIKTNAKKHIA 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG--KKTGVAINPETPV 123
D HLM+ + + + D + +TFH E+ + I K G+++ PET +
Sbjct: 64 DAHLMVENPLYYFEKLWD-KVEYLTFHFEALKDENEIWKIIQKYKSKVKIGISLKPETKI 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
L+ + +ID++LIM+V PG GGQ+ I+S++ KI K I K++++ ++VDGG+ +
Sbjct: 123 EKLDPFLKDIDLVLIMSVEPGKGGQKFIDSSLEKIAYIKEKINKQNLNLVIQVDGGINNI 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K ++G D+LV G+ + + A L+
Sbjct: 183 TAKQAFKSGGDVLVAGTYLVFEPTKEKIASLLD 215
>gi|269115265|ref|YP_003303028.1| ribulose-phosphate 3-epimerase [Mycoplasma hominis]
gi|268322890|emb|CAX37625.1| Ribulose-phosphate 3-epimerase [Mycoplasma hominis ATCC 23114]
Length = 215
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 6/200 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS-V 64
+I S+L + ++L I + G +H+DVMDG FV N + I+ ++
Sbjct: 3 KISSSVLDVEKNKLTNYIDQLVDWGVCNVHYDVMDGIFVNNTALTFQEIKQVKENCKKHT 62
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + + + + G DI+TFH E+ + + + ++ + G+AI P T
Sbjct: 63 MDIHLMVKDVFKYYEMYKNIG-DILTFHYEAFENSDLEKMIKQCQKDNVRLGLAIKPNTQ 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTS 180
V + + ++LIM+V PGFGGQ+ IE++ KI++ + ++ +EVDGGV
Sbjct: 122 VEEIRQYLKHCSLVLIMSVEPGFGGQKFIENSFNKIKELADIRKALDLNFIIEVDGGVKD 181
Query: 181 RNIKSLVQAGADLLVVGSSF 200
+NI + G +L VVGS
Sbjct: 182 QNIAKCFECGVNLAVVGSYL 201
>gi|167745973|ref|ZP_02418100.1| hypothetical protein ANACAC_00668 [Anaerostipes caccae DSM 14662]
gi|167654488|gb|EDR98617.1| hypothetical protein ANACAC_00668 [Anaerostipes caccae DSM 14662]
Length = 239
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + S+ D L + I +G H+D++DG F +++ +R +
Sbjct: 6 EKELMVSASVSCMDLCHLADAIEEAEGSGISFFHYDMVDGRFNDCFILSETLLKQMRGIT 65
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ HL + +I + ADAG D I H E+ R I G + +A T
Sbjct: 66 SLPIEAHLAAFEPERYIGMYADAGADYIAVHYEAMKDPLRVFEQIREAGARPVLAYKSTT 125
Query: 122 PV-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
P + E IL +TVNPGF GQ++ E + IRQ +A++ + ++ DG +
Sbjct: 126 PPGEDFITLAGEAAWILKLTVNPGFSGQKMQEGALGHIRQMRAMLNSAGLKTKIQADGNI 185
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I V+AGAD+L G+S G+ + + D+ K+A
Sbjct: 186 NQDTIPRAVEAGADILTGGTSGLFLDGK-TVKQCCEDMLKAA 226
>gi|148377480|ref|YP_001256356.1| ribulose-phosphate 3-epimerase [Mycoplasma agalactiae PG2]
gi|148291526|emb|CAL58912.1| Ribulose phosphate 3 epimerase(Pentose 5 phosphate 3 epimerase)
[Mycoplasma agalactiae PG2]
Length = 220
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 8/206 (3%)
Query: 1 MTPSIQ-IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M + + + PS+L + + + G K IH+DVMDG FVPN++ D I+++
Sbjct: 1 MNKNNKYVTPSLLNVEPENRLNMANILVNEGIKWIHYDVMDGKFVPNLAIELDEIKNIHE 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT--GVA 116
D HLM+ + +I++ D DI+TFH E+ + L+ + G+A
Sbjct: 61 KGLKHFKDAHLMVENPLDYIDLYKDV-VDIVTFHYEAVES-EKLLKFLKQKHHDYRLGIA 118
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
I P T V ++ + I ++L+M+V PG GGQ+ I S I KI+ K L K + ++V
Sbjct: 119 IKPSTEVEEIKKFLPYIQLVLVMSVEPGKGGQKFIPSAIDKIKLLKQLRIKHAYDYLIQV 178
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSF 200
DGG+ +AGAD V G+
Sbjct: 179 DGGINDVTGPECFKAGADACVAGTFI 204
>gi|2894532|emb|CAA11895.1| ribulose-5-phosphate-epimerase [Homo sapiens]
Length = 174
Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D FD H+M+S + + +A AG + TFH E++ + ++ I G K G+AI P T
Sbjct: 10 DPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGT 69
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V L ++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV
Sbjct: 70 SVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGVGPD 127
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGA+++V GS+ + S L +
Sbjct: 128 TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 161
>gi|293364112|ref|ZP_06610846.1| ribulose-phosphate 3-epimerase [Mycoplasma alligatoris A21JP2]
gi|292552313|gb|EFF41089.1| ribulose-phosphate 3-epimerase [Mycoplasma alligatoris A21JP2]
Length = 216
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PS+L + ++ E + + AG K IH+D+MDG FVPN + I ++
Sbjct: 5 ITPSLLNVEENKRLEMANTLINAGIKWIHYDIMDGKFVPNTAIKTSEIANIHKNGLRHFK 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT--GVAINPETPV 123
D HLM+ + +++ + D D++T H E+ + G+AI P T V
Sbjct: 65 DAHLMVENPLNYLEELKDI-VDVMTVHWEAFDDKDEFYDWLDQNYVDYKIGLAIKPNTSV 123
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ D + + ++L+M+V PG GGQ I +++ KI+ K ++ +++VDGG+
Sbjct: 124 EEIIDFLPYVALVLVMSVEPGKGGQAFIPTSLDKIKFLSEYRHKNNLGYAIQVDGGINQD 183
Query: 182 NIKSLVQAGADLLVVGSSF 200
K + GAD LV G+
Sbjct: 184 TSKLCFKNGADALVAGTYL 202
>gi|317473344|ref|ZP_07932639.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
gi|316899180|gb|EFV21199.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 239
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 4/222 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + S+ D L + I +G H+D++DG F +++ +R +
Sbjct: 6 EKELMVSASVSCMDLCHLADAIEEAEGSGISFFHYDMVDGRFNDCFILSETLLKQMRGIT 65
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
+ HL + +I + ADAG D I H E+ R I G + +A T
Sbjct: 66 SLPIEAHLAAFEPERYIGMYADAGADYIAVHYEAMKDPLRVFEQIREAGARPVLAYKSTT 125
Query: 122 PV-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGV 178
P + E IL +TVNPGF GQ++ E + IRQ +A++ + ++ DG +
Sbjct: 126 PPGEDFITLAGEAAWILKLTVNPGFSGQKMQEGALGHIRQMRAMLNSAGLKTKIQADGNI 185
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I V+AGAD+L G+S G+ + + D+ K+A
Sbjct: 186 NQDTIPRAVEAGADILTGGTSGLFLDGK-TVKQCCEDMLKTA 226
>gi|304383519|ref|ZP_07365979.1| ribulose-phosphate 3-epimerase [Prevotella marshii DSM 16973]
gi|304335329|gb|EFM01599.1| ribulose-phosphate 3-epimerase [Prevotella marshii DSM 16973]
Length = 225
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ S++ AD L +I + + +H D+MD FVPN++FG D + S+R S
Sbjct: 8 KLSVSLMCADLMNLERDIRRLERLNVDYLHVDIMDAKFVPNLTFGPDTVNSIRCISHLPL 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HL++ I + DI+T H E + ++ I G+A+NP+T +
Sbjct: 68 DIHLLMEHPSVIIRSVDIREGDIVTLHHECKDSMLENIAFIKQRHALVGLALNPDTSIEE 127
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS---LEVDGGVTSRN 182
+ D++L+M + PGF G +I + K+R+ + + K+ + VDG V+
Sbjct: 128 ARKYLPYTDVVLLMLIVPGFAGSTMIHGIMDKVRKTREYLEKKGYDNIRIAVDGSVSHEK 187
Query: 183 IKSLVQAGADLLVVGSS-FFNQKGEIS 208
+ + GA + + G++ F + EI
Sbjct: 188 AEMMAAMGASVFIGGTAGVFIKGKEIE 214
>gi|291542093|emb|CBL15203.1| Pentose-5-phosphate-3-epimerase [Ruminococcus bromii L2-63]
Length = 233
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 7/220 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ I PS+ D + E++ I + + +H D+ DG +VP+ G D + L +
Sbjct: 1 MRKLMIAPSVGCCDLFHVEEQVKLINE-KSDYLHMDIKDGVYVPSYGIGPDYLDYLNKHV 59
Query: 62 D--SVFDCHLMISSIDSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAIN 118
+ D HLM+ ++ A AG IT H + ++ I +G K GVA++
Sbjct: 60 ENLKPMDAHLMVKHPQQYLETFAKAGAAYITPHTDCIEGDAFVTIHKIKELGCKAGVALS 119
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
P P++ +E + +D + IM V+PG GQ + KI Q + +R ++ +E DG
Sbjct: 120 PSVPLSTIEYYLPLLDKVTIMIVDPGIAGQPVDPQMFVKINQLAKIRKERGLNFLIEADG 179
Query: 177 GVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLND 215
+ S + L +AGADL+++G + +N+ + + A + +
Sbjct: 180 SMNSSLYRPLYEAGADLVILGPPALWNKDTDFNKAWDIME 219
>gi|291320142|ref|YP_003515400.1| ribulose phosphate 3 epimerase [Mycoplasma agalactiae]
gi|290752471|emb|CBH40443.1| Ribulose phosphate 3 epimerase(Pentose 5 phosphate 3 epimerase)
[Mycoplasma agalactiae]
Length = 220
Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 1 MTPSIQ-IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M + + + PS+L + + + G K IH+DVMDG FVPN++ D I+++
Sbjct: 1 MNKNNKYVTPSLLNVEPENRLNMANVLVNEGIKWIHYDVMDGKFVPNLAIELDEIKNIHE 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT--GVA 116
D HLM+ + +I++ D DI+TFH E+ + L+ + G+A
Sbjct: 61 KGLKHFKDAHLMVENPLDYIDLYKDV-VDIVTFHYEAVES-AKLLKFLKQKHHDYRLGIA 118
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
I P T V ++ + I ++L+M+V PG GGQ+ I S I KI+ K L K + ++V
Sbjct: 119 IKPNTEVEEIKKFLPYIQLVLVMSVEPGKGGQKFIPSAIDKIKLLKQLRIKHAYDYLIQV 178
Query: 175 DGGVTSRNIKSLVQAGADLLVVGS 198
DGG+ +AGAD V G+
Sbjct: 179 DGGINDVTGPECFKAGADACVAGT 202
>gi|325262777|ref|ZP_08129513.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
gi|324031871|gb|EGB93150.1| ribulose-phosphate 3-epimerase [Clostridium sp. D5]
Length = 225
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 5/219 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ D ++ I + A +H D+ DG +V + G D + L
Sbjct: 1 MEKKLLLAPSMGCCDLYDFEHQVRYIDE-KADFLHIDIKDGNYVKSFGVGPDFMTVLAKV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP 119
+ D HLM+ +I A AG IT H + ++ I ++G K G+A+NP
Sbjct: 60 VQTPMDAHLMVKHPQDYIEACAQAGAAYITPHTDCIESDAFVTINKILSLGCKAGIAMNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
P+ + + + + IM V+ G+ GQ++I KIR + + +E DG
Sbjct: 120 AAPLEAIRHYLPLLSKVTIMIVDAGYAGQKVIVQMYDKIRTLVKWRAEMGLDFLIEADGS 179
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLND 215
+ + L +AGAD++V+G + +N+ +I A + +
Sbjct: 180 MNADVYGPLYEAGADVVVLGPPALWNKDTDIEKAWEIME 218
>gi|326623276|gb|EGE29621.1| protein SgcE [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 214
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y
Sbjct: 1 MEVSMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPT 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q++ + DGG+T
Sbjct: 121 TPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
R + L AGA LV+G + F
Sbjct: 179 RAARLLTAAGAQHLVIGRALF 199
>gi|309777354|ref|ZP_07672315.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914895|gb|EFP60674.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 229
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 4/215 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
S+ + PSI+ AD + +EI + K GA IH+D+MD F +I ++S +
Sbjct: 2 SLMLAPSIMCADLLHMEDEIKELEKGGADFIHYDIMDTTFTTQTMLPFCMIPRIQSITAI 61
Query: 64 VFDCHLMISSIDSHINIIADAGCD-IITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D HLMI + ++ + D I H E + I +IHA G K +N T
Sbjct: 62 PLDIHLMIDRPERILDKLLPYCKDTYIGIHVEVTKEITSLFSSIHAAGGKCCAILNAGTS 121
Query: 123 VAILEDVIDEIDMILIMTVNPGF-GGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVT 179
+ LE+++ IDM+ ++ N GF Q L E + KIR ++L+ RSI LEVDGGV+
Sbjct: 122 IHCLEEILPYIDMVNLILGNAGFCARQPLNEQLLLKIRNTRSLLDSCDRSILLEVDGGVS 181
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ QAGA++ V+G+ Q I+ + +
Sbjct: 182 PEVAEKAKQAGANVFVLGTKSIYQPDCIASQECIK 216
>gi|219119800|ref|XP_002180652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408125|gb|EEC48060.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPN---ISFGADVIRSLRSYSDS 63
I PS+LA+D+S + EI KAG+ + H D+ DG F+ + ++FG +++++R D+
Sbjct: 1 ISPSLLASDWSDIKGEIQRCLKAGSLRFHVDIFDGVFLDSPYALTFGPQMVKAIRRSCDT 60
Query: 64 ------VFDCHLMISSIDSHINIIADAGCDIITFHPESS---PHIRRSLRTIHAMGKKTG 114
D H+ + ++ +A AG F E++ + + G + G
Sbjct: 61 STDRKVALDLHVCVDRPARYVMPMAKAGATCFIFQIEATSQMEDAIALAQLVVDAGMQCG 120
Query: 115 VAINPETPVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--- 169
+++NP T V + +++ + ++ I+ V PGFGGQ + + K+R A R
Sbjct: 121 ISLNPATRVEAIVPLLETGLVSVVDILAVEPGFGGQDFQRTALDKVRFLHAWNTSRPREN 180
Query: 170 -ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ + VDGG+ I +++AGA +LV GS F
Sbjct: 181 IVDIMVDGGINKDTIAQVLEAGAKILVAGSFLF 213
>gi|213584524|ref|ZP_03366350.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 149
Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 59/142 (41%), Positives = 88/142 (61%), Gaps = 5/142 (3%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+ A AG IITFHPE+S H+ R+L+ I G K G+ NP T ++ L+ V+D++D+IL
Sbjct: 2 VPDFAAAGASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLSYLDYVMDKLDVIL 61
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADLLV 195
+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV NI + AGAD+ V
Sbjct: 62 LMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNNIGEIAAAGADMFV 121
Query: 196 VGSSFFNQKGEISYAKRLNDLK 217
GS+ F + Y K +++++
Sbjct: 122 AGSAIF---DKPDYKKVIDEMR 140
>gi|294155571|ref|YP_003559955.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase)
[Mycoplasma crocodyli MP145]
gi|291600048|gb|ADE19544.1| ribulose-phosphate 3-epimerase (pentose-5-phosphate 3-epimerase)
[Mycoplasma crocodyli MP145]
Length = 219
Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I PS+L + S+ + + + KAG K IH+DVMD FVPN + I ++
Sbjct: 1 MIMEKNITPSLLNVEESKRLDMANTLIKAGIKWIHYDVMDEKFVPNKAIQISEIANISKN 60
Query: 61 S-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI--HAMGKKTGVAI 117
D HLM+ + +IN + D D+ITFH E+ + + K G+AI
Sbjct: 61 GLKHFKDAHLMVVNPLDYINDLKDI-VDVITFHWEAFDDKEDFYDWLIQNYDDYKIGLAI 119
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVD 175
P T V + D + I ++L+M+V PG GGQ I S + KI+ + ++VD
Sbjct: 120 KPNTKVEEIVDFLPYISLVLVMSVEPGKGGQSFIPSALDKIKFLYETRISKSYNYLIQVD 179
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSF 200
GG+ K + GAD LV G+
Sbjct: 180 GGINQDTSKLCFKNGADALVAGTYL 204
>gi|167747941|ref|ZP_02420068.1| hypothetical protein ANACAC_02671 [Anaerostipes caccae DSM 14662]
gi|167652672|gb|EDR96801.1| hypothetical protein ANACAC_02671 [Anaerostipes caccae DSM 14662]
Length = 219
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 4/204 (1%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D L E+I ++G H+D++DG F G ++ +RS + HL +
Sbjct: 1 MDLLHLKEQIVETEQSGISFFHYDMVDGKFNKCFILGDTLLEMMRSEVTLPIEAHLAAYN 60
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET-PVAILEDVIDE 132
D++I A G D I H E+ H ++ I G + +A +T P + E
Sbjct: 61 PDAYIERFAKLGADYIAVHYEAMEHPLKTFDLIRKFGAQPVLAFKCDTAPPDDFLALAKE 120
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAG 190
+ IL +TVNPGF GQ + ++++ I++ + + + S+S++ DG V + +L QAG
Sbjct: 121 VPWILKLTVNPGFSGQTMQQNSLGHIKEMRHRLSEAGMSVSIQADGNVNPSTVNTLYQAG 180
Query: 191 ADLLVVG-SSFFNQKGEISYAKRL 213
AD+ G S F + K +
Sbjct: 181 ADIFTGGTSGLFKSGHTVKENKEI 204
>gi|153814593|ref|ZP_01967261.1| hypothetical protein RUMTOR_00807 [Ruminococcus torques ATCC 27756]
gi|145848087|gb|EDK25005.1| hypothetical protein RUMTOR_00807 [Ruminococcus torques ATCC 27756]
Length = 234
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ D G ++ I + A +H D+ DG +V G D + L+
Sbjct: 7 MEKKLMLAPSMGCCDLYDFGHQVKFIDEH-ADFLHIDIKDGNYVKTFGVGPDFMTVLKKV 65
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +I A AG IT H + ++ I ++G K G+A+NP
Sbjct: 66 VKKPMDAHLMVKHPQDYIEACAAAGAAYITPHTDCIESDAFVTINKIISLGCKAGIAMNP 125
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
P+ + + + + IM V+ G+ GQ++I KIR + + +E DG
Sbjct: 126 AAPLEAIRYYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLAKWREEMKLDFLIEADGS 185
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK-KSALA 222
+ + L +AGAD++V+G + +N+ +I A + + + KS LA
Sbjct: 186 MNAGVYAPLYEAGADMVVLGPPALWNKDEDIEKAWAIMEQEVKSELA 232
>gi|255027025|ref|ZP_05299011.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL J2-003]
Length = 141
Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT 140
A AG D IT H E+ H+ R+L+ I + G K G +NP TP+ +L+ V++E+DM+L MT
Sbjct: 1 FAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDVLQHVLNELDMVLFMT 60
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGS 198
VNPGFGGQ+ I + KI K ++ ++ + +EVDGGV K AGA++ V GS
Sbjct: 61 VNPGFGGQKFIPEVLEKISAFKEIVDEKGLDIEIEVDGGVDHETAKLCRDAGANVFVAGS 120
Query: 199 SFFNQKGEISYAKRLNDL 216
+ K + +L +
Sbjct: 121 YIYGNKNRQTPIDKLRAI 138
>gi|218661235|ref|ZP_03517165.1| D-ribulose-5 phosphate 3-epimerase protein [Rhizobium etli IE4771]
Length = 130
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/124 (62%), Positives = 96/124 (77%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT I+I PSILAADF+RLGEE+ N+T AGA IH DVMDG FVPNISFG DVI+SLR+Y
Sbjct: 2 MTLPIRIAPSILAADFARLGEEVRNVTAAGADWIHLDVMDGHFVPNISFGPDVIKSLRAY 61
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+D+ FDCHLMIS +D ++ A AGCD IT H ES PH+ RSL+T+ +GKK GV +NP
Sbjct: 62 TDATFDCHLMISPVDDYLEAFAKAGCDRITVHAESGPHLHRSLQTVRNLGKKVGVTLNPG 121
Query: 121 TPVA 124
P++
Sbjct: 122 NPLS 125
>gi|331658049|ref|ZP_08359011.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
gi|331056297|gb|EGI28306.1| ribulose-phosphate 3-epimerase [Escherichia coli TA206]
Length = 160
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/158 (38%), Positives = 104/158 (65%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I+PSI AD RL +EI + + + +H D+MDG +V NI+FG + I +++ S +F
Sbjct: 3 KILPSIFGADILRLKDEIHFLEEEQTEILHVDLMDGTYVSNIAFGPNQIAAMKKASSMIF 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+++ + HI+ + + G ++++ H ES+PH+ ++ I G+K GV +NP TP ++
Sbjct: 63 DVHMMLANPERHIDDVINTGAEMVSVHYESTPHVHYIIQKIKKAGRKAGVVLNPGTPESV 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
+E ++D+ID IL+MT+NPG GQ I ++ KIR K
Sbjct: 123 IEYLLDDIDYILLMTINPGQPGQTFIHKSLEKIRNTKK 160
>gi|317501244|ref|ZP_07959449.1| hypothetical protein HMPREF1026_01392 [Lachnospiraceae bacterium
8_1_57FAA]
gi|316897420|gb|EFV19486.1| hypothetical protein HMPREF1026_01392 [Lachnospiraceae bacterium
8_1_57FAA]
Length = 228
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ D G ++ I + A +H D+ DG +V G D + L+
Sbjct: 1 MEKKLMLAPSMGCCDLYDFGHQVKFIDEH-ADFLHIDIKDGNYVKTFGVGPDFMTVLKKV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +I A AG IT H + ++ I ++G K G+A+NP
Sbjct: 60 VKKPMDAHLMVKHPQDYIEACAAAGAAYITPHTDCIESDAFVTINKIISLGCKAGIAMNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
P+ + + + + IM V+ G+ GQ++I KIR + + +E DG
Sbjct: 120 AAPLEAIRYYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLAKWREEMKLDFLIEADGS 179
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK-KSALA 222
+ + L +AGAD++V+G + +N+ +I A + + + KS LA
Sbjct: 180 MNAGVYAPLYEAGADMVVLGPPALWNKDEDIEKAWAIMEQEVKSELA 226
>gi|323694539|ref|ZP_08108706.1| hypothetical protein HMPREF9475_03570 [Clostridium symbiosum
WAL-14673]
gi|323501413|gb|EGB17308.1| hypothetical protein HMPREF9475_03570 [Clostridium symbiosum
WAL-14673]
Length = 245
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I S+ +AD RLG +I IT AGA +H D+MDG FVP F I+ + +
Sbjct: 1 MTVS-KIFASVFSADCLRLGADIRRITAAGADGLHIDIMDGEFVPLFGFNNIWIQQIGAA 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAIN 118
S D H+M + + + H ES P ++ + + G G+AI+
Sbjct: 60 STLPLDLHIMSGESARILERLDLSRVVSAAVHVESGPGSGLQAVFKLMRKRGISCGLAIS 119
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL-IGKRSISLEVDGG 177
P T + LE ++EID IL+M+ PG +E T +IR+ K + + + VDGG
Sbjct: 120 PRTSIEKLEPYLEEIDGILVMSCQPGVQNAGFLEDTYSRIREIKGMLRDRPECYIGVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + ++ GA V+G F RL
Sbjct: 180 LDLEKAERCIKCGASRAVIGRYLFRHPEPDRVISRLQA 217
>gi|148993156|ref|ZP_01822722.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP9-BS68]
gi|147928130|gb|EDK79148.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae SP9-BS68]
Length = 150
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 59/152 (38%), Positives = 93/152 (61%), Gaps = 6/152 (3%)
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+S+ + H+ A AG DII+ H E++PHI +L+ I ++G K V INP TPV ++ V
Sbjct: 1 MVSNPEHHLEDFARAGADIISIHVEATPHIHGALQKIRSLGVKPSVVINPGTPVEAIKHV 60
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLV 187
+ +D +L+MTVNPGFGGQ + T+ K+R+ AL ++ ++ +EVDGG+ + I
Sbjct: 61 LHLVDQVLVMTVNPGFGGQAFLPETMDKVRELVALREEKGLNFEIEVDGGIDDQTIAQAK 120
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+AGA + V GS F + +R+ L+K
Sbjct: 121 EAGATVFVAGSYVFKGE----VNERVQTLRKQ 148
>gi|331090007|ref|ZP_08338897.1| hypothetical protein HMPREF1025_02480 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402921|gb|EGG82487.1| hypothetical protein HMPREF1025_02480 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 228
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ D G ++ I + A +H D+ DG +V G D + L+
Sbjct: 1 MEKKLMLAPSMGCCDLYDFGHQVKFIDEH-ADFLHIDIKDGNYVKTFGVGPDFMTVLKKV 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINP 119
D HLM+ +I A AG IT H + ++ I ++G K G+A+NP
Sbjct: 60 VKKPMDAHLMVKHPQDYIEACAAAGAAYITPHTDCIEGDAFVTINKIISLGCKAGIAMNP 119
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGG 177
P+ + + + + IM V+ G+ GQ++I KIR + + +E DG
Sbjct: 120 AAPLEAIRYYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLAKWREEMKLDFLIEADGS 179
Query: 178 VTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLK-KSALA 222
+ + L +AGAD++V+G + +N+ +I A + + + KS LA
Sbjct: 180 MNAGVYAPLYEAGADMVVLGPPALWNKDEDIEKAWAIMEQEVKSELA 226
>gi|313622154|gb|EFR92710.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL J1-023]
Length = 148
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 59/148 (39%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP ++L+ +
Sbjct: 1 MLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTPASVLDAI 60
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLV 187
+ ++D++L MTVNPGFGGQ I+STI +R + + +EVDGGV + +
Sbjct: 61 LGDVDLVLQMTVNPGFGGQSFIDSTIENMRYLDNWRRENNGGYVIEVDGGVNAETAEKCK 120
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLND 215
QAG D+LV GS FF +++ + L
Sbjct: 121 QAGVDVLVAGSYFFGADDKVACVQGLKK 148
>gi|266621604|ref|ZP_06114539.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
gi|288866702|gb|EFC99000.1| ribulose-phosphate 3-epimerase [Clostridium hathewayi DSM 13479]
Length = 210
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRS-LRSYSDS 63
++++PSI +AD +GE + + +H D+ DG FVPNI+FG +R+ +
Sbjct: 1 MKLMPSIASADPLAVGEVLKKLEAW--PYLHIDIEDGNFVPNITFGMKAVRAICKKAGKR 58
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
HLM++ +++++ +A G D + H E+ + L A+G + G+A+N +TPV
Sbjct: 59 YIQVHLMVTHPETYLDGLAACGVDSVIAHLEALDYPLHFLNHCRALGLEPGLAVNIKTPV 118
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
++ + +D +L+MT P + +++ + ++ + I + L DGGVT +
Sbjct: 119 EAVKPFLGNMDQLLLMTSEPDYLEEKVYGPAVERLIRLAGNIPA-GVELYADGGVTRETL 177
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ L +AG V+G F + K L +
Sbjct: 178 RELEEAGVHGAVLGRLVFQSPDPLEMLKELKE 209
>gi|198243651|ref|YP_002215530.1| epimerase [Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|197938167|gb|ACH75500.1| protein SgcE [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
Length = 210
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y+
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPTTPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLTAAGAQHLVIGRALF 195
>gi|319935704|ref|ZP_08010135.1| hypothetical protein HMPREF9488_00966 [Coprobacillus sp. 29_1]
gi|319809362|gb|EFW05797.1| hypothetical protein HMPREF9488_00966 [Coprobacillus sp. 29_1]
Length = 225
Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 6/215 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+++ PS++ D + EI I A + H D++D + N+S + + +D
Sbjct: 2 KVKLSPSLMCIDLLNIENEIK-ILNMKANEYHVDIIDWHYCKNMSLAPCFMEQISKITDI 60
Query: 64 VFDCHLMISSID-SHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPET 121
D HL + +ID I + +G I+T PE + R R + + + GV INP
Sbjct: 61 PMDAHLYVDNIDMDLIELCCQSGAKILTMPPEIIEKQVYRMKRYLDSQNVQFGVFINPAV 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT 179
+ I++ ID +LIM+V+PGF GQ +E+T+ KI +AK + + VDG
Sbjct: 121 SLEIIKPYAHIIDRLLIMSVDPGFAGQPFVEATLKKIAEAKQYREENHYHYSIAVDGCCN 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K L +AG D+ +VG+S K K L+
Sbjct: 181 ENYYKQLYEAGVDVFIVGTSGLFGKN-TDTKKALD 214
>gi|291550749|emb|CBL27011.1| Pentose-5-phosphate-3-epimerase [Ruminococcus torques L2-14]
Length = 230
Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 5/214 (2%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ + PS+ D ++ I + A +H D+ DG +V G + + L+
Sbjct: 4 EKKLLLAPSMGCCDLYDFEHQVRFIDEH-ADFLHIDIKDGNYVKTFGVGPEFMTVLKKVV 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINPE 120
D HLM+ +I A+AG IT H + ++ I ++G K G+A+NP
Sbjct: 63 KKPMDAHLMVKHPQDYIEACAEAGAAYITPHTDCIESDAFVTINKIISLGCKAGIALNPA 122
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
P+ + + + + IM V+ G+ GQ++I KIR + + +E DG +
Sbjct: 123 APLEGIRHYLPLLSKVTIMIVDAGYAGQKVITQMYDKIRTLVQWREEMGLDFLIEADGSM 182
Query: 179 TSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAK 211
+ L +AGAD++V+G + +N+ EIS A
Sbjct: 183 NAGVYAPLYEAGADMVVLGPPALWNKDPEISKAW 216
>gi|115522600|ref|YP_779511.1| ribulose-phosphate 3-epimerase [Rhodopseudomonas palustris BisA53]
gi|115516547|gb|ABJ04531.1| ribulose-5-phosphate 3-epimerase [Rhodopseudomonas palustris
BisA53]
Length = 228
Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 64/206 (31%), Positives = 111/206 (53%), Gaps = 4/206 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
SI ++PS++ + ++ + + ++H D+MDG F +I +R++RS +
Sbjct: 9 SIHLLPSLMCLSPLDVRRDLETLCR-YFDEVHVDIMDGHFCNSIHLSPSFVRAIRSVCSA 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSP-HIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + + +++ + AG ITFH E+ P + R + I G G+A+ P T
Sbjct: 68 KIDVHLMVENPEMYVDQLVLAGASSITFHVEAVPRSVNRLIARIRQHGVGVGLALCPSTS 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI--GKRSISLEVDGGVTS 180
+ +L+D++ ++D I I+ V+PGF GQ++ T +I+ A L + L VDGGV
Sbjct: 128 LQVLDDLLPKVDRITILGVDPGFVGQEISSGTTKRIQYASELRRVHHAHVDLCVDGGVRW 187
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGE 206
N + L +GAD L++G KGE
Sbjct: 188 TNWRELAASGADSLILGYGALFDKGE 213
>gi|323485556|ref|ZP_08090902.1| hypothetical protein HMPREF9474_02653 [Clostridium symbiosum
WAL-14163]
gi|323401204|gb|EGA93556.1| hypothetical protein HMPREF9474_02653 [Clostridium symbiosum
WAL-14163]
Length = 245
Score = 174 bits (443), Expect = 6e-42, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT S +I S+ +AD RLG +I IT AGA +H D+MDG FVP F I+ + +
Sbjct: 1 MTVS-KIFASVFSADCLRLGADIRRITAAGADGLHIDIMDGEFVPLFGFNNIWIQQIGAA 59
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAIN 118
S D H+M + + + H ES P ++ + + G G+AI+
Sbjct: 60 STLPLDLHIMSGESARILERLDLSRVVSAAVHVESGPGSGLQTVFKLMRKRGISCGLAIS 119
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL-IGKRSISLEVDGG 177
P T + LE ++EID IL+M+ PG +E T ++R+ K + + + VDGG
Sbjct: 120 PRTSIEKLEPYLEEIDGILVMSCQPGVQNAGFLEDTYSRLREIKGMLRDRPECYIGVDGG 179
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + ++ GA V+G F RL
Sbjct: 180 LDLEKAERCIKCGASRAVIGRYLFRHPEPDRVISRLQA 217
>gi|269839038|ref|YP_003323730.1| ribulose-phosphate 3-epimerase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790768|gb|ACZ42908.1| Ribulose-phosphate 3-epimerase [Thermobaculum terrenum ATCC
BAA-798]
Length = 229
Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
MT +++ ++ AD SRLGEE++ + AG +H DV DG VP++ F I LR
Sbjct: 1 MTSGVRLGAALFNADHSRLGEELARVEAAGLDFVHLDVFDGRLVPDLGFPPRTIEHLRPL 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ F+ HL + ++ DAG D++ H ES + ++ ++ G + G+
Sbjct: 61 TRLPFEVHLAAEEPLRFLPVLRDAGVDLLLLHVESVRLLYEAVFSVRDAGLRVGLVFGLG 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFG--GQQLIESTIPKIRQAKALIG--KRSISLEVDG 176
TP+ +L V +D +L++ G G G IP++R+A+ LI + + L+V G
Sbjct: 121 TPLELLPPVAGMLDAVLLLARVTGEGTRGASFNPMVIPRVRRARELIDQAEAGVDLQVAG 180
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
GV +++ LV AGA L +G + + + +
Sbjct: 181 GVRREHVRDLVAAGATSLALGGGIYRVPDMGAEVRAIR 218
>gi|19074354|ref|NP_585860.1| D-RIBULOSE 5 PHOSPHATE 3 EPIMERASE [Encephalitozoon cuniculi GB-M1]
gi|51701892|sp|Q8SRP6|RPE_ENCCU RecName: Full=Ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=RPE
gi|19068996|emb|CAD25464.1| D-RIBULOSE 5 PHOSPHATE 3 EPIMERASE [Encephalitozoon cuniculi GB-M1]
Length = 217
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SIL +F L EE+ + + G IH DVMD FV NI+FG +I + + D VF
Sbjct: 9 RIGISILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILEH-DFVF 67
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D H+M+ S I I ++T H E + G+A+NPET V
Sbjct: 68 DVHMMVESPLDIIMQIDLERVSLVTIHSEVC-DKAGVAEYLRKRNVLFGIALNPETQVDD 126
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
E + D +LIM+V PGFGGQ+ E + K+ + + + + +DGG+ NI
Sbjct: 127 AE--MRSADFVLIMSVKPGFGGQKFQEECLAKVEEVR----RYGKMVGIDGGIEMSNIGR 180
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ GAD VVGS +F + + + D
Sbjct: 181 IT--GADYAVVGSGYFRSGDRKKFLRDITD 208
>gi|114583063|ref|XP_001145717.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase isoform 5
[Pan troglodytes]
gi|114583065|ref|XP_001145784.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase isoform 6
[Pan troglodytes]
Length = 160
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+S + + +A AG + TFH E++ + ++ I G K G+AI P T V L
Sbjct: 1 MHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYL 60
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++IDM L+MTV PGFGGQ+ +E +PK+ + S+ +EVDGGV +
Sbjct: 61 APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PSLDIEVDGGVGPDTVHKC 118
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA+++V GS+ + S L +
Sbjct: 119 AEAGANMIVSGSAIMRSEDPRSVINLLRN 147
>gi|50365455|ref|YP_053880.1| pentose-5-phosphate-3-epimerase [Mesoplasma florum L1]
gi|50364011|gb|AAT75996.1| pentose-5-phosphate-3-epimerase [Mesoplasma florum L1]
Length = 227
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-S 59
M ++ SI +F +G++I + +AG + IH D+MDG FV N + + ++
Sbjct: 1 MNNK-KVAVSIYVFNFLEIGKKIDELIEAGMEWIHVDIMDGNFVNNYALCQKFCKDIKDK 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-----IRRSLRTIHAMGKKTG 114
Y D H+M S+ + +I A+AGCD FH E+ + + I + K
Sbjct: 60 YPKIKVDAHMMCSNSEKYIESFAEAGCDYFIFHYETLTDKNPITVNNIINKIKSYNMKPI 119
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISL 172
+A+NPET ++ D++ ++ M + PGF GQ++IES+ KI + + +
Sbjct: 120 IALNPETSFEHIKTYCDDLYAVMCMNILPGFNGQKIIESSYSKINIINKYRKENNKVFKI 179
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSF 200
DGG+ K ++ AGAD++VVG+
Sbjct: 180 MTDGGLREDTYKEILDAGADIVVVGAFV 207
>gi|313900365|ref|ZP_07833859.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312954914|gb|EFR36588.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 228
Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I + S+ AD + + ++ I + +H+DV+DG F FG ++ +R D
Sbjct: 8 KKILVSASLSCADLLHVSDAVAQINASDIDFVHYDVVDGMFNNCFVFGDLILEKIRPICD 67
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
+ HL + ++ +I A AG D I H E + I + G + +A+ +T
Sbjct: 68 KPIEVHLAVQNVRPYIEPFARAGADYIAVHYEIDDDLEDIFAHIRSAGCRPVLAMQCDTE 127
Query: 123 V-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
V + + ++D IL + V PG+ GQ + + IR K I S ++ DG +
Sbjct: 128 VPSDFVKLASQVDWILKLMVQPGYAGQHMQREAVEHIRSMKEQITANCLSCRIQADGNIH 187
Query: 180 SRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDLKKSA 220
+ I + AGA +L G S F Q ++ + L +K++A
Sbjct: 188 TGTIPQVCAAGASILTGGTSGLFRQDADLQ--ENLRRMKEAA 227
>gi|148667819|gb|EDL00236.1| ribulose-5-phosphate-3-epimerase, isoform CRA_b [Mus musculus]
gi|149016013|gb|EDL75294.1| similar to Ribulose-5-phosphate-3-epimerase, isoform CRA_a [Rattus
norvegicus]
gi|149016014|gb|EDL75295.1| similar to Ribulose-5-phosphate-3-epimerase, isoform CRA_a [Rattus
norvegicus]
Length = 160
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+S + + +A AG + TFH E++ + ++ I G K G+AI P T V L
Sbjct: 1 MHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTTVEYL 60
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++IDM L+MTV PGFGGQ+ +E +PK+ + ++ +EVDGGV ++
Sbjct: 61 APWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--PTLDIEVDGGVGPDTVQKC 118
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA+++V GS+ + L +
Sbjct: 119 AEAGANMIVSGSAIMRSDDPRAVINLLRN 147
>gi|240047741|ref|YP_002961129.1| ribulose-phosphate 3-epimerase [Mycoplasma conjunctivae HRC/581]
gi|239985313|emb|CAT05326.1| Ribulose-phosphate 3-epimerase [Mycoplasma conjunctivae]
Length = 217
Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVI-RSLRSYSDSV 64
I PSIL A S+ + + + G K IH+D MDG FV N + D I + + + +
Sbjct: 4 IISPSILNATKSQRMKLVQTLFNLGIKWIHYDFMDGKFVSNTAITTDEIRKITSKFPNYI 63
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGVAINPETP 122
D HLM + I I D T H E+ I +R K G+AI T
Sbjct: 64 SDIHLMSYQPEQQIKEIIGF-VDYATIHFEALTKEEIYAIIRKFQNQIKL-GIAIKINTK 121
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTS 180
+ +E+ + ID++LIM+V PG GGQ+ ++ KI Q + +I +I ++VDGG+
Sbjct: 122 IEEIEEFLPFIDLVLIMSVEPGKGGQEFNPISLQKISQLRKIIDLHKFNILIQVDGGIKD 181
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N + +AGA+++V G+ K++ L K
Sbjct: 182 FNASQVFKAGANIVVAGTFL----AYRPTKKKIKSLLK 215
>gi|56413440|ref|YP_150515.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197362363|ref|YP_002142000.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|56127697|gb|AAV77203.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197093840|emb|CAR59323.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 210
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS
Sbjct: 1 MLLHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L GA LV+G + F
Sbjct: 179 LLAAVGAQHLVIGRALF 195
>gi|71894143|ref|YP_278251.1| ribulose-phosphate 3-epimerase [Mycoplasma synoviae 53]
gi|71850931|gb|AAZ43540.1| ribulose-phosphate 3-epimerase [Mycoplasma synoviae 53]
Length = 223
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 13/220 (5%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGAD-VIRSLRSYSDSVF 65
+ PSIL + + + ++++ G H+DVMD FV N + D +I+ + +
Sbjct: 9 VTPSILNVEKEKRIDYVNSLIDLGISWFHYDVMDAKFVENTAIEVDEIIKISKKTKSHIK 68
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSP---HIRRSLRTIHAMGKKTGVAINPETP 122
D HLM+ + +++ + D DI TFH E+ ++ + G+AINPET
Sbjct: 69 DVHLMVENPYEYVDKLKDY-VDIFTFHYETIENDLDKFEEFLDLNKHNLRIGLAINPETD 127
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK----ALIGKRSISLEVDGGV 178
V + ++++ ++L+M+VNPG GGQ IES + KI++ K L ++VDGG+
Sbjct: 128 VERVFPFLEKLTLVLVMSVNPGKGGQAFIESALDKIKKLKFERLNLRKNYEYLIQVDGGI 187
Query: 179 TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + GA+L VVG+ + +N + K
Sbjct: 188 NNLTGPKCFKKGANLCVVGTFLVKSP----TKETINSIFK 223
>gi|313631702|gb|EFR98923.1| ribulose-phosphate 3-epimerase family protein [Listeria seeligeri
FSL N1-067]
Length = 187
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 41 GCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
G +V N++ G + + +R+ ++ D HL + +I++ + I+FH E + +
Sbjct: 1 GVYVNNLALGPEYLEIVRNNTEIPLDIHLATITPLKYIDMFGPVKPEYISFHVEVADDVT 60
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
+R I + K +AINPETP+ + +++++M+L+MTVNPGF GQ+ + K+R
Sbjct: 61 EVIRKIRSYNVKPSIAINPETPIEAIYPYLNDVEMVLMMTVNPGFAGQKFQTDVLQKLRD 120
Query: 161 AKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
KA + +EVDG + + + D+ V+G S+ F+ + + SY++RL
Sbjct: 121 LKAKLAGKVHVPLIEVDGNINKETVGLMRDCLPDIYVLGTSALFHDRDKTSYSERL 176
>gi|302531815|ref|ZP_07284157.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
gi|302440710|gb|EFL12526.1| ribulose-phosphate 3-epimerase [Streptomyces sp. AA4]
Length = 240
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + LG E++ + A H D D FVP+ F D++ +LRS++ F H+
Sbjct: 18 SLWSADLADLGAEVARL-APYADVFHIDASDTRFVPSPLFFPDLVAALRSHTQVPFHVHV 76
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M + A AG D+++ H E+ + +L+ + A G G+A+ +TPV +
Sbjct: 77 MAEQALPLVEDFARAGADLLSVHAEA-DDVVAALQAVRARGGAAGLALRLDTPVDTVGAY 135
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS---ISLEVDGGVTSRNIKSL 186
+D++D ++++ G G + ++RQ +AL + + + DGG+ + L
Sbjct: 136 LDDVDFVVLIGTPLGTKGTAMDPVAPNRVRQLRALAARTGRDQLPVIADGGIRENTVPDL 195
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
AGAD +VVGS K + L+ ++ A+D
Sbjct: 196 ADAGADAVVVGSLLLGSKDLAATTAWLHR-RRGDAAVD 232
>gi|255029854|ref|ZP_05301805.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes LO28]
Length = 116
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 52/114 (45%), Positives = 72/114 (63%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PSIL+ADF+ L +I + GA IH DVMDG FVPNI+FG V++++R +
Sbjct: 3 KIAPSILSADFATLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLPL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
D HLMI + D++I A AG D IT H E+ H+ R+L+ I + G K G +NP
Sbjct: 63 DVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNP 116
>gi|42560936|ref|NP_975387.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|42492433|emb|CAE77029.1| ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|301321119|gb|ADK69762.1| putative ribulose-phosphate 3-epimerase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 218
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 67/217 (30%), Positives = 117/217 (53%), Gaps = 7/217 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDS 63
++IVPSI A+ L EI+N+TKA QIHFDVMDG FV N + ++ ++ + +
Sbjct: 1 MKIVPSIYCANLIDLKTEITNLTKAQINQIHFDVMDGVFVKNYALSNKLVDEIKQQFPNL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRR---SLRTIHAMGKKTGVAINPE 120
+ + H+M + I++ +A D +TFH + + + + I K G+A++
Sbjct: 61 IIEVHIMGIDLLDKISLFKNA--DYLTFHYNAINDLNQAKLWINEIKKYNLKPGIALDLN 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL-IGKRSISLEVDGGVT 179
+ ++ +++EI+++ M++ PGF GQ+ ES+ K+ K L + + ++DGGV
Sbjct: 119 NEINDIKKILNEIEVVTFMSIKPGFTGQKFEESSWTKLNLIKELKLKYPHLKFQIDGGVR 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
NIK L+ D +VVGS FN+ + R+ L
Sbjct: 179 WENIKKLIDCQLDWIVVGSLLFNENDYLKVVSRIKQL 215
>gi|309776703|ref|ZP_07671677.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
gi|308915451|gb|EFP61217.1| ribulose-phosphate 3-epimerase [Erysipelotrichaceae bacterium
3_1_53]
Length = 217
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 8 VPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDC 67
S+ D L + I+ I + +H+DV+DGCF FG ++ LR + +
Sbjct: 2 SASLSCCDLLHLADAIAEINASDIDFVHYDVVDGCFNNCFVFGDLMLEKLRPICEKPIEV 61
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV-AIL 126
HL + + +I A AG D I H E + + I G + +A+ +T V
Sbjct: 62 HLAVEHVRPYIEPFARAGADYIAVHYEIADDLEEIFALIRQAGCRPILAMRSDTEVPQDF 121
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIK 184
+ ++D IL + V PG+ GQ + + IR K I K S+ ++ DG + + I
Sbjct: 122 VKLASQVDWILKLMVQPGYAGQTMQPDALRHIRTMKEEILKHQLSVRIQADGNIHAGTIP 181
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +AGAD+L G+S +KG + + L LK++
Sbjct: 182 LVTEAGADILTGGTSGLFRKG-MHLQESLRLLKEA 215
>gi|54020106|ref|YP_115744.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 232]
gi|53987279|gb|AAV27480.1| ribulose-5-phosphate-3-epimerase [Mycoplasma hyopneumoniae 232]
gi|144227490|gb|AAZ44238.2| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae J]
Length = 216
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M I I PS+L S + G K HFD MDG FV N++ I+++
Sbjct: 1 MKRKI-ISPSLLNIKKSSRLKSTRIFLNLGIKWFHFDFMDGIFVKNVAISIPEIKNIIKK 59
Query: 61 SDSVF-DCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAIN 118
S D HLM + + I + + T H ES + + + + + ++ K G+AI
Sbjct: 60 SKEFISDVHLMSVNPEEQIKQLL-GYVNFATIHFESRNYAQIKEIISKYSRKIKIGIAIK 118
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
PET + + D++ EI ++LIM+V PG GGQ IE+T KI + +I + + ++VDG
Sbjct: 119 PETKIEQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKIIQENNYKIIIQVDG 178
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
G+ N K + +GAD++VVG+ + ++ K +N
Sbjct: 179 GIKDFNSKKVFDSGADVIVVGTFLAEKPTKLKIKKLIN 216
>gi|313665466|ref|YP_004047337.1| ribulose-phosphate 3-epimerase [Mycoplasma leachii PG50]
gi|312949344|gb|ADR23940.1| putative ribulose-phosphate 3-epimerase [Mycoplasma leachii PG50]
Length = 218
Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 117/217 (53%), Gaps = 7/217 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR-SYSDS 63
++IVPSI A+ L EI+N+TKA QIHFDVMDG FV N + ++ ++ + +
Sbjct: 1 MKIVPSIYCANLIDLKTEITNLTKAQINQIHFDVMDGVFVKNYALSNKLVDEIKQQFPNL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRR---SLRTIHAMGKKTGVAINPE 120
+ + H+M + I++ +A D +TFH + + + + I K G+A++
Sbjct: 61 IIEVHIMGIDLLDKISLFKNA--DYLTFHYNAINDLNQAKLWINEIKKYNLKPGIALDLN 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL-IGKRSISLEVDGGVT 179
+ ++ +++EI+++ M++ PGF GQ+ ES+ K+ K L + + ++DGGV
Sbjct: 119 NEINDIKKILNEIEVVTFMSIKPGFTGQKFEESSWTKLNLIKELKLKYPHLKFQIDGGVR 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
NIK L+ D +VVGS FN+ + ++ L
Sbjct: 179 WENIKKLIDCQLDWIVVGSLLFNENDYLKVVSKIKQL 215
>gi|313636070|gb|EFS01959.1| ribulose-phosphate 3-epimerase family protein [Listeria seeligeri
FSL S4-171]
Length = 187
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 41 GCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
G +V N++ G + + +R+ ++ D HL + +I++ + I+FH E + +
Sbjct: 1 GVYVNNLALGPEYLEIVRNNTEIPLDIHLATITPLKYIDMFGPVKPEYISFHVEVADDVT 60
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
+R I + K +AINPETP+ + +++++M+L+MTVNPGF GQ+ + K+R
Sbjct: 61 EVIRKIRSYNIKPSIAINPETPIEAIYPYLNDVEMVLMMTVNPGFAGQKFQTDVLQKLRD 120
Query: 161 AKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
KA + +EVDG + + + D+ V+G S+ F+ + + SY++RL
Sbjct: 121 LKAKLAGKVHVPLIEVDGNINKETVGLMHDCLPDIYVLGTSALFHDRDKTSYSERL 176
>gi|312382656|gb|EFR28040.1| hypothetical protein AND_04504 [Anopheles darlingi]
Length = 193
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINP 119
+D+ F+ H+M+ + +ADAG TFH E H + R + G + G+AI P
Sbjct: 31 TDAFFETHMMVERPQQWVEAMADAGVQQYTFHVEPVVHMVPDVCRKVREAGMRVGLAIKP 90
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T V +++ I ++DMILIMTV PGFGGQ + + K++ + +++EVDGGV+
Sbjct: 91 GTAVETIQNYIADVDMILIMTVEPGFGGQMFMADMLEKVQSLRN--NYPLLNIEVDGGVS 148
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
I S +AGA+++V G++ + A + +L+ S L
Sbjct: 149 PTTIDSCAKAGANMIVSGTAIIRANDQ---AAVIRELRNSLL 187
>gi|237704035|ref|ZP_04534516.1| sgcE [Escherichia sp. 3_2_53FAA]
gi|309798097|ref|ZP_07692470.1| epimerase [Escherichia coli MS 145-7]
gi|226901947|gb|EEH88206.1| sgcE [Escherichia sp. 3_2_53FAA]
gi|281181443|dbj|BAI57773.1| putative ribulose-phosphate 3-epimerase [Escherichia coli SE15]
gi|308118305|gb|EFO55567.1| epimerase [Escherichia coli MS 145-7]
gi|315286870|gb|EFU46287.1| epimerase [Escherichia coli MS 110-3]
gi|323955366|gb|EGB51136.1| ribulose-phosphate 3 epimerase [Escherichia coli H263]
Length = 210
Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +A+ G E++ + +H D+ D F+ NI+FG ++++ +
Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
H M++ N +A+ I H E+ + +L I G + G+ NP TP+
Sbjct: 61 LSFHFMVARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGARAGLVFNPATPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ E+D +++MT P GQ+ I S KI++ + + DGG+T +
Sbjct: 121 AWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTEC--WADGGITLAAAQ 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L AGA +V+G + F+ + + L
Sbjct: 179 QLAAAGAQHMVIGRALFSSSDYRATLAQFATL 210
>gi|23006094|ref|ZP_00048579.1| COG0036: Pentose-5-phosphate-3-epimerase [Magnetospirillum
magnetotacticum MS-1]
Length = 160
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 60/133 (45%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT 140
++ G T H E PHI RSL+TI A+G++ GVA+NP TP + +E ++D +D++L+MT
Sbjct: 11 FSETGRTRFTVHVEPGPHIHRSLQTIRALGRRAGVALNPGTPASAIEPLLDMVDLVLVMT 70
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
VNPGFGGQ I S + + + KAL+G R+I + VDGG+T QAGA++LV GS+
Sbjct: 71 VNPGFGGQSFIHSALETVSRVKALVGGRNIDISVDGGITPETAGPAAQAGANILVAGSAA 130
Query: 201 FNQKGEISYAKRL 213
F G +Y K +
Sbjct: 131 FKG-GPAAYQKNI 142
>gi|32307590|gb|AAP79200.1| ribulose-5-phosphate 3-epimerase [Bigelowiella natans]
Length = 136
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 65/134 (48%), Positives = 92/134 (68%), Gaps = 1/134 (0%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFH 92
+HFDVMD +VPN++ G V ++LR + + D HLM+S +D I AG ITFH
Sbjct: 1 VHFDVMDNHYVPNLTIGPMVCKALRDHGVTAPIDVHLMVSPVDRIIPDFIAAGASYITFH 60
Query: 93 PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
PE+S H+ RSL+ I G K G+ NP TP+ ILE VID++D++L+M+VNPGFGGQ+ I
Sbjct: 61 PEASLHVDRSLQMIKDAGLKCGLVFNPATPLDILEYVIDKVDIVLLMSVNPGFGGQKFIP 120
Query: 153 STIPKIRQAKALIG 166
+T+ K ++A+ALI
Sbjct: 121 NTLEKAKKARALID 134
>gi|310827463|ref|YP_003959820.1| hypothetical protein ELI_1874 [Eubacterium limosum KIST612]
gi|308739197|gb|ADO36857.1| hypothetical protein ELI_1874 [Eubacterium limosum KIST612]
Length = 200
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 2/196 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I+PS+ +A+ LG E + + G ++H D+ DG F+ NI+FG + SLR+ S F+
Sbjct: 5 IIPSLASANQLCLGTEAELVEQKGYSELHLDIEDGNFIHNITFGERTLLSLRNVSPLHFN 64
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HLM++ +++ ++ + FH ES+ HI L G+A P T +
Sbjct: 65 VHLMVTEPVAYLPLLKKLSPCSVFFHAESTQHIAEVLSLFEENNITAGLAFLPFTALNNY 124
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+I IL+MT P Q I++ + KI++A +++ + DGG++ + K+L
Sbjct: 125 AYLIQRCHSILLMTSEPDGKNQCFIDTMVDKIKKASQDFPQQA--IWTDGGISFKRAKTL 182
Query: 187 VQAGADLLVVGSSFFN 202
+ AG +V+G FF+
Sbjct: 183 LSAGVKKVVIGRDFFS 198
>gi|16132122|ref|NP_418721.1| KpLE2 phage-like element; predicted epimerase [Escherichia coli
str. K-12 substr. MG1655]
gi|89111011|ref|AP_004791.1| predicted epimerase [Escherichia coli str. K-12 substr. W3110]
gi|170083735|ref|YP_001733055.1| KpLE2 phage-like element; epimerase [Escherichia coli str. K-12
substr. DH10B]
gi|218561473|ref|YP_002394386.1| epimerase [Escherichia coli S88]
gi|218707961|ref|YP_002415480.1| epimerase [Escherichia coli UMN026]
gi|238903393|ref|YP_002929189.1| KpLE2 phage-like element; putative epimerase [Escherichia coli
BW2952]
gi|253775084|ref|YP_003037915.1| epimerase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254164220|ref|YP_003047330.1| epimerase [Escherichia coli B str. REL606]
gi|293402956|ref|ZP_06647053.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1412]
gi|297519806|ref|ZP_06938192.1| epimerase [Escherichia coli OP50]
gi|298378482|ref|ZP_06988366.1| sgcE [Escherichia coli FVEC1302]
gi|300900341|ref|ZP_07118518.1| epimerase [Escherichia coli MS 198-1]
gi|301019672|ref|ZP_07183829.1| epimerase [Escherichia coli MS 196-1]
gi|301646543|ref|ZP_07246416.1| epimerase [Escherichia coli MS 146-1]
gi|312969974|ref|ZP_07784156.1| protein sgcE [Escherichia coli 1827-70]
gi|331650770|ref|ZP_08351798.1| protein SgcE [Escherichia coli M718]
gi|732069|sp|P39362|SGCE_ECOLI RecName: Full=Protein sgcE
gi|537142|gb|AAA97197.1| ORF_f210 [Escherichia coli str. K-12 substr. MG1655]
gi|1790754|gb|AAC77257.1| KpLE2 phage-like element; predicted epimerase [Escherichia coli
str. K-12 substr. MG1655]
gi|85677042|dbj|BAE78292.1| predicted epimerase [Escherichia coli str. K12 substr. W3110]
gi|169891570|gb|ACB05277.1| KpLE2 phage-like element; predicted epimerase [Escherichia coli
str. K-12 substr. DH10B]
gi|218368242|emb|CAR06058.1| putative epimerase; KpLE2 phage-like element [Escherichia coli S88]
gi|218435058|emb|CAR16011.1| putative epimerase; KpLE2 phage-like element [Escherichia coli
UMN026]
gi|238861604|gb|ACR63602.1| KpLE2 phage-like element; predicted epimerase [Escherichia coli
BW2952]
gi|242379815|emb|CAQ34645.1| predicted epimerase [Escherichia coli BL21(DE3)]
gi|253326128|gb|ACT30730.1| Ribulose-phosphate 3-epimerase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253976123|gb|ACT41794.1| ribulose-phosphate 3-epimerase [Escherichia coli B str. REL606]
gi|253980279|gb|ACT45949.1| ribulose-phosphate 3-epimerase [Escherichia coli BL21(DE3)]
gi|260450886|gb|ACX41308.1| Ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|291429871|gb|EFF02885.1| ribulose-phosphate 3-epimerase [Escherichia coli FVEC1412]
gi|298280816|gb|EFI22317.1| sgcE [Escherichia coli FVEC1302]
gi|299882133|gb|EFI90344.1| epimerase [Escherichia coli MS 196-1]
gi|300356140|gb|EFJ72010.1| epimerase [Escherichia coli MS 198-1]
gi|301075248|gb|EFK90054.1| epimerase [Escherichia coli MS 146-1]
gi|310337472|gb|EFQ02583.1| protein sgcE [Escherichia coli 1827-70]
gi|315138855|dbj|BAJ46014.1| ribulose-phosphate 3-epimerase [Escherichia coli DH1]
gi|323945900|gb|EGB41944.1| ribulose-phosphate 3 epimerase [Escherichia coli H120]
gi|323950612|gb|EGB46490.1| ribulose-phosphate 3 epimerase [Escherichia coli H252]
gi|331051224|gb|EGI23273.1| protein SgcE [Escherichia coli M718]
Length = 210
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +A+ G E++ + +H D+ D F+ NI+FG ++++ +
Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
H M++ N +A+ I H E+ + +L I G + G+ NP TP+
Sbjct: 61 LSFHFMLARPQRWFNALAEIRPAWIFVHAETLDYPSETLTEIRHTGARAGLVFNPATPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ E+D +++MT P GQ+ I S KI++ + + DGG+T +
Sbjct: 121 AWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKIQKVRTAFPQTEC--WADGGITLAAAQ 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L AGA +V+G + F+ + + L
Sbjct: 179 QLAAAGAQHMVIGRALFSSSDYRATLAQFATL 210
>gi|83319620|ref|YP_424557.1| ribulose-phosphate 3-epimerase, putative [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
gi|83283506|gb|ABC01438.1| ribulose-phosphate 3-epimerase, putative [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 215
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 66/217 (30%), Positives = 118/217 (54%), Gaps = 7/217 (3%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDS 63
++IVPSI A+ L EI+N+TKA QIHFDVMDG FV N + ++ ++ + +
Sbjct: 1 MKIVPSIYCANLIDLKTEITNLTKAQINQIHFDVMDGVFVKNYALSNKLVDEIKQHFPNL 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRR---SLRTIHAMGKKTGVAINPE 120
+ + H+M + I++ +A D +TFH + + + ++ I K G+A++
Sbjct: 61 IIEVHIMGIDLLDKISLFKNA--DYLTFHYNAINDLNQAKLLIKEIRKHNLKPGIALDLN 118
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL-IGKRSISLEVDGGVT 179
+ ++ +++EI+++ M++ PGF GQ+ +ST K+ K L + + ++DGGV
Sbjct: 119 NEINDIQKILNEIELVTFMSIKPGFTGQKFEDSTWNKLNLIKELKVKYPHLKFQIDGGVR 178
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
NIK L+ D +VVGS FN+ + ++ L
Sbjct: 179 WENIKKLINCQLDWIVVGSLLFNEDNYLKVVNKIKQL 215
>gi|71893503|ref|YP_278949.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae J]
Length = 212
Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+L S + G K HFD MDG FV N++ I+++ S
Sbjct: 1 MISPSLLNIKKSSRLKSTRIFLNLGIKWFHFDFMDGIFVKNVAISIPEIKNIIKKSKEFI 60
Query: 66 -DCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
D HLM + + I + + T H ES + + + + + ++ K G+AI PET +
Sbjct: 61 SDVHLMSVNPEEQIKQLL-GYVNFATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++ EI ++LIM+V PG GGQ IE+T KI + +I + + ++VDGG+
Sbjct: 120 EQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKIIQENNYKIIIQVDGGIKDF 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N K + +GAD++VVG+ + ++ K +N
Sbjct: 180 NSKKVFDSGADVIVVGTFLAEKPTKLKIKKLIN 212
>gi|255028444|ref|ZP_05300395.1| hypothetical protein LmonL_03076 [Listeria monocytogenes LO28]
Length = 135
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 64/138 (46%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Query: 85 GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG 144
G +IT H E++ H+ R+++ I + G + GV +NP TP + LE V+D+ID IL+MTVNPG
Sbjct: 1 GAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPG 60
Query: 145 FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
GGQ+ +S++ KIR+ KA IG R I +EVDGGV K AGADL+VVGS F
Sbjct: 61 LGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNDELAKECTLAGADLIVVGSYLF--- 117
Query: 205 GEISYAKRLNDLKKSALA 222
E L L K L
Sbjct: 118 -EGDIEANLEKLAKGVLT 134
>gi|114632630|ref|XP_001172562.1| PREDICTED: similar to rcRPE isoform 1 [Pan troglodytes]
Length = 160
Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+S + + +A A + TFH E++ + ++ I G K G+AI P T V L
Sbjct: 1 MHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIKPGTSVEYL 60
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++IDM L+MTV PGFG Q+ +E +PK+ + S+ +E DGGV S +
Sbjct: 61 APWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQF--PSLDIEGDGGVGSDTVHKC 118
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA+++V GS+ + S L +
Sbjct: 119 AEAGANMIVSGSAIMRSEDPRSVINLLRN 147
>gi|283834395|ref|ZP_06354136.1| protein SgcE [Citrobacter youngae ATCC 29220]
gi|291069937|gb|EFE08046.1| protein SgcE [Citrobacter youngae ATCC 29220]
Length = 210
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +A+ G E++ + G +H D+ D F+ NI+FG ++++ +
Sbjct: 1 MILHPSLASANPLHYGRELTALDNLGFGTLHLDIEDSSFINNITFGMKTVQAVARQTPHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
H M++ N +A+ I H E+ + +L I G + G+A NP TP+
Sbjct: 61 LSFHFMVARPQLWFNALAEIRPAWIFVHAETLDYPSETLAEIRHTGARAGLAFNPATPID 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ E+D +++MT P Q+ I S KIR+ + + DGG+T +
Sbjct: 121 AWRYLAPELDGLMVMTSEPDGQEQRFIPSMCEKIRKVRTAFPQTEC--WADGGITLVAAQ 178
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L AGA +V+G + F+ + + L
Sbjct: 179 QLAAAGAQHMVIGRALFSSSDYRATLAQFATL 210
>gi|24307923|ref|NP_008847.1| ribulose-phosphate 3-epimerase isoform 2 [Homo sapiens]
gi|114583057|ref|XP_001145634.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 4 [Pan
troglodytes]
gi|114583059|ref|XP_001145475.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 2 [Pan
troglodytes]
gi|114583061|ref|XP_001145546.1| PREDICTED: ribulose-5-phosphate-3-epimerase isoform 3 [Pan
troglodytes]
gi|16550907|dbj|BAB71076.1| unnamed protein product [Homo sapiens]
gi|62702161|gb|AAX93087.1| unknown [Homo sapiens]
gi|119590879|gb|EAW70473.1| ribulose-5-phosphate-3-epimerase, isoform CRA_b [Homo sapiens]
Length = 178
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK--------------- 111
H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 1 MHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQ 60
Query: 112 ---KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
+ G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ +
Sbjct: 61 GPLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--P 118
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
S+ +EVDGGV + +AGA+++V GS+ + S L +
Sbjct: 119 SLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 165
>gi|94986662|ref|YP_594595.1| Pentose-5-phosphate-3-epimerase [Lawsonia intracellularis
PHE/MN1-00]
gi|94730911|emb|CAJ54274.1| Pentose-5-phosphate-3-epimerase [Lawsonia intracellularis
PHE/MN1-00]
Length = 155
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/152 (40%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
MISS + +I+ AG +++ H E++ H++R + IH +G K GVA+NP T +++LE +
Sbjct: 1 MISSPERYISNFHTAGANLLVVHVEATIHLQRVVSEIHRLGMKAGVALNPSTSLSVLEYI 60
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLV 187
+D+ID++L+M+VNPGFGGQ + ST KI + +I +R +I ++VDGGVT N K+L+
Sbjct: 61 LDDIDLVLLMSVNPGFGGQHFLSSTYEKIYNLRRMIDEREKTILIQVDGGVTLSNTKALL 120
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
AG D+ V GSSFF + + + S
Sbjct: 121 DAGTDVFVCGSSFFVGESYSEKRYQFESVANS 152
>gi|239624796|ref|ZP_04667827.1| ribulose-5-phosphate 3-epimerase [Clostridiales bacterium
1_7_47_FAA]
gi|239521182|gb|EEQ61048.1| ribulose-5-phosphate 3-epimerase [Clostridiales bacterium
1_7_47FAA]
Length = 226
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 10/225 (4%)
Query: 1 MTPSIQI-VPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M ++ PSIL + EE+ + H D+MDG FVPN + +R
Sbjct: 1 MEKRPKLLCPSILNLAIDNIREEVEKLDATDMDIYHVDLMDGTFVPNFGMSVRELEMIRR 60
Query: 60 YSD----SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+D + DCH+M+ + ++I +A AG DII HPES +L I GKKTG+
Sbjct: 61 VTDQGAHKLIDCHMMVMNPHNYIEKVAQAGADIIYIHPESELIPSATLELIQMQGKKTGL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLE 173
+NP T + ++D++ D ++IM VNPGF G++ + T K + + + + L
Sbjct: 121 ILNPCTTLESVKDMLPITDYVMIMAVNPGFAGREFMPYTRQKFIELNSYREEHGLGYHLL 180
Query: 174 VDGGVTSRNIKSLV-QAGADLLVVGSS--FFNQKGEISYAKRLND 215
+DGG T I L G + V+G FF ++ + R+
Sbjct: 181 LDGGATREVISDLYHNCGVEGFVLGKQELFFQEEDYAACIDRIRA 225
>gi|21752577|dbj|BAC04212.1| unnamed protein product [Homo sapiens]
Length = 178
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 20/167 (11%)
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK--------------- 111
H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 1 MHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQ 60
Query: 112 ---KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
+ G+AI P T V L ++IDM L+MTV PGFGGQ+ +E +PK+ +
Sbjct: 61 GPLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQF--P 118
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
S+ +EVDGGV + +AGA+++V GS+ + S L +
Sbjct: 119 SLDIEVDGGVGLDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 165
>gi|330723930|gb|AEC46300.1| ribulose-phosphate 3-epimerase [Mycoplasma hyorhinis MCLD]
Length = 218
Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RS 59
M I I PS+L ++ + + G + IH+D MD FVPN + I+ +
Sbjct: 1 MKTKI-ISPSLLNVSKNQRIKVSKTLFNLGIEWIHYDYMDVKFVPNKAIEIFEIKKIVNK 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI--HAMGKKTGVAI 117
+S+ + D H+M + + I+ I + TFH E + I ++ K G+AI
Sbjct: 60 FSNYISDIHIMAYNPEKIIDQIINV-VTYATFHYEVFENASNIKDFIAKYSSKIKLGIAI 118
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
NP+T +L +D+ID++L+M+V PG GGQ IE++ KI + ++ ++VD
Sbjct: 119 NPDTSEEVLLPFLDKIDLVLVMSVVPGKGGQLFIENSYKKIANLAKIRKEKKYKFLIQVD 178
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSF 200
GG+ N K + +GAD++V G+
Sbjct: 179 GGIKDFNAKKVFDSGADVIVSGTYL 203
>gi|304373209|ref|YP_003856418.1| Ribulose-phosphate 3-epimerase [Mycoplasma hyorhinis HUB-1]
gi|304309400|gb|ADM21880.1| Ribulose-phosphate 3-epimerase [Mycoplasma hyorhinis HUB-1]
Length = 218
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 7/205 (3%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RS 59
M I I PS+L ++ + + G K IH+D MD FVPN + I+ +
Sbjct: 1 MKTKI-ISPSLLNVSKNQRIKVSKTLFNLGIKWIHYDYMDAKFVPNKAIEIFEIKKIVNK 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI--HAMGKKTGVAI 117
+S+ + D H+M + + I+ I + TFH E + I ++ K G+AI
Sbjct: 60 FSNYISDIHIMAYNPEKIIDQIINV-VTYATFHYEVFENASNIKDFIAKYSSKIKLGIAI 118
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVD 175
NP+T +L +D+ID++L+M+V PG GGQ IE++ KI + ++ ++VD
Sbjct: 119 NPDTSEEVLLPFLDKIDLVLVMSVVPGKGGQLFIENSYKKIANLAKIRKEKKYKFLIQVD 178
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSF 200
GG+ N K + GAD++V G+
Sbjct: 179 GGIKDFNAKKVFDFGADVIVSGTYL 203
>gi|148767469|gb|ABR10706.1| probable ribulose-5-phosphate 3-epimerase [Mesorhizobium sp. CJ1]
Length = 218
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +A+ + ++ I H DV DG F P+ F D++ + + HL
Sbjct: 3 SLWSANLANFESDLRRIEP-YVDLHHIDVADGHFAPSFLFFPDLVARIAGLTAKPIHVHL 61
Query: 70 MISS--IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ +++ +AG D+I+ H E+ R++R +G + GV + ETPV +
Sbjct: 62 MVDDAIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVEAVT 121
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVTSRNI 183
+ E+ + ++ G GQ L E ++ A+A++ + L DGG+ +
Sbjct: 122 PFVSEVAFVTLLGTAIGVKGQSLSEKACDRLGAARAILREAGCEADVVLAADGGIRHETV 181
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L AGA+ +V+GS F K L+ LK +A
Sbjct: 182 PLLRAAGAETVVLGSLAFGDKDLAGRIGWLHGLKVAA 218
>gi|144575301|gb|AAZ53525.2| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 7448]
Length = 216
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFG-ADVIRSLRS 59
M I I PS+L S + G K HFD MDG FV N++ ++ ++
Sbjct: 1 MKRKI-ISPSLLNIKKSSRLKSTRIFLNLGIKWFHFDFMDGIFVKNVAISIPEIKNIIKK 59
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAIN 118
+ D HLM + + I + + T H ES + + + + + ++ K G+AI
Sbjct: 60 SKKFISDVHLMSVNPEEQIKQLL-GYVNFATIHFESRNYAQIKEIISKYSRKIKIGIAIK 118
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDG 176
PET + + D++ EI ++LIM+V PG GGQ IE+T KI + +I + + ++VDG
Sbjct: 119 PETKIEQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKIIQENNYKIIIQVDG 178
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
G+ N K + +GAD++VVG+ + ++ K +N
Sbjct: 179 GIKDFNSKRVFDSGADVIVVGTFLAEKPTKLKIKKLIN 216
>gi|301019472|ref|ZP_07183642.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
gi|299882200|gb|EFI90411.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 196-1]
Length = 247
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 15/223 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + +LGE + + +H D+MDG F P + G I L + + D HLM
Sbjct: 26 ILAGQWLKLGEYLQTLRALEQPVLHLDLMDGHFCPQFTVGPWAITQLP--AQIIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM---------GKKTGVAINPET 121
+ + + AG +T E+SPH+ L + G+++ P T
Sbjct: 84 VDNPWPVVQASVKAGAHCVTLQVENSPHLHHMLHWLGEQNTEVSGATMPVLRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGG 177
P+ + VI++++++ I+ VNPG+G + + + +I Q AL+ + SI L VDG
Sbjct: 144 PLEHILPVIEDVEIVQILAVNPGYGSKLSKPALLRRIAQVVALLNASGKRDSILLAVDGS 203
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+T + ++ +G D +V GS+ F R + +SA
Sbjct: 204 LTLEELPEIIASGVDRVVSGSALFRNDALAENISRWLTIIQSA 246
>gi|224583890|ref|YP_002637688.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|224468417|gb|ACN46247.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 214
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ +
Sbjct: 1 MEVSMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSLHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q++ + DGG+T
Sbjct: 121 TPLLSYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHF--PAAECWADGGITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
R + L AGA LV+G + F
Sbjct: 179 RAARLLAAAGAQHLVIGRALF 199
>gi|313900977|ref|ZP_07834467.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312954397|gb|EFR36075.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 239
Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S+ D + E + I ++ K +H+D++DG F FG +++ RSY+
Sbjct: 7 TTEFSFNASLSCIDLGHIAESMEEINQSRIKSLHYDMVDGQFNECFIFGDLMLKVFRSYT 66
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
HL + +I G D I H E+ I ++ +T+ G K +A +T
Sbjct: 67 KLPITVHLACRNPIPYIKPCIANGADYIAIHYEADIDIEKAFQTVREFGAKPVLAFRCDT 126
Query: 122 PV-AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGV 178
PV V + + IL + V PGF GQ E + I + L+ + +EVDG +
Sbjct: 127 PVPEDFIKVSEHAEWILKLCVQPGFSGQTFQEEAVRHIEKMHQLLMTAGLDRVIEVDGNI 186
Query: 179 TSRNIKSLVQAGADLLVVGSS 199
+ I+ +AGA + G+S
Sbjct: 187 HTGTIQKCAKAGATMFTGGTS 207
>gi|300949579|ref|ZP_07163571.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
gi|300451021|gb|EFK14641.1| putative ribulose-phosphate 3-epimerase [Escherichia coli MS 116-1]
Length = 231
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 15/223 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + +LGE + + +H D+MDG F P + G I L + + D HLM
Sbjct: 10 ILAGQWLKLGEYLQTLRALEQPVLHLDLMDGHFCPQFTVGPWAITQLP--AQIIKDVHLM 67
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM---------GKKTGVAINPET 121
+ + + AG +T E+SPH+ L + G+++ P T
Sbjct: 68 VDNPWPVVQASVKAGAHCVTLQVENSPHLHHMLHWLGEQNTEVSGATMPVLRGISLCPAT 127
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGG 177
P+ + VI++++++ I+ VNPG+G + + + +I Q AL+ + SI L VDG
Sbjct: 128 PLEHILPVIEDVEIVQILAVNPGYGSKLSKPALLRRIAQVVALLNASGKRDSILLAVDGS 187
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+T + ++ +G D +V GS+ F R + +SA
Sbjct: 188 LTLEELPEIIASGVDRVVSGSALFRNDALAENISRWLTIIQSA 230
>gi|322714656|gb|EFZ06227.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 214
Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ +
Sbjct: 1 MEVSMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSLHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q++ + DGG+T
Sbjct: 121 TPLLSYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSRDHF--PAAECWADGGITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
R + L AGA LV+G + F
Sbjct: 179 RAARLLAAAGAQHLVIGRALF 199
>gi|283834389|ref|ZP_06354130.1| ribulose-phosphate 3-epimerase [Citrobacter youngae ATCC 29220]
gi|291069930|gb|EFE08039.1| ribulose-phosphate 3-epimerase [Citrobacter youngae ATCC 29220]
Length = 247
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + +LGE + ++ +H D+MDG F P + G I L + D HLM
Sbjct: 26 ILAGQWLKLGEYLQDLRALEQPVLHLDLMDGHFCPQFTVGPWAIAQLPQ--QMIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT---------GVAINPET 121
+ + + AG +T E++PH+ L + + G+++ P T
Sbjct: 84 VDNPWPVVQASVKAGAHCVTLQVENTPHLHHMLHWLGEQNAEVSGGKMPVLRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS----ISLEVDGG 177
P+ + VI++++++ I+ VNPG+G + + + +I Q AL+ I L VDG
Sbjct: 144 PLEHILPVIEDVEIVQILAVNPGYGSKLSRSALLRRIAQVVALLNAAGKRDAILLTVDGS 203
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + ++ +G D +V GS+ F R
Sbjct: 204 LNLEELPEIIASGVDRVVSGSALFRNDALADNISRW 239
>gi|317473557|ref|ZP_07932847.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
gi|316898959|gb|EFV20983.1| ribulose-phosphate 3 epimerase [Anaerostipes sp. 3_2_56FAA]
Length = 210
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Query: 33 QIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFH 92
H+D++DG F G ++ +RS + HL + D++I A G D I H
Sbjct: 11 FFHYDMVDGKFNKCFILGDTLLEMMRSEVTLPIEAHLAAYNPDAYIERFAKLGADYIAVH 70
Query: 93 PESSPHIRRSLRTIHAMGKKTGVAINPET-PVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
E+ H ++ I G + +A +T P + E+ IL +TVNPGF GQ +
Sbjct: 71 YEAMEHPLKTFDLIRKFGAQPVLAFKCDTAPPDDFLALAKEVPWILKLTVNPGFSGQTMQ 130
Query: 152 ESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEIS 208
++++ I++ + + + S+S++ DG V + +L QAGAD+ G S F +
Sbjct: 131 QNSLGHIKEMRHRLSEAGMSVSIQADGNVNPSTVNTLYQAGADIFTGGTSGLFKSGHTVK 190
Query: 209 YAKRL 213
K +
Sbjct: 191 ENKEI 195
>gi|72080490|ref|YP_287548.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 7448]
Length = 212
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFG-ADVIRSLRSYSDSV 64
I PS+L S + G K HFD MDG FV N++ ++ ++ +
Sbjct: 1 MISPSLLNIKKSSRLKSTRIFLNLGIKWFHFDFMDGIFVKNVAISIPEIKNIIKKSKKFI 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPV 123
D HLM + + I + + T H ES + + + + + ++ K G+AI PET +
Sbjct: 61 SDVHLMSVNPEEQIKQLL-GYVNFATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKI 119
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSR 181
+ D++ EI ++LIM+V PG GGQ IE+T KI + +I + + ++VDGG+
Sbjct: 120 EQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKIIQENNYKIIIQVDGGIKDF 179
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
N K + +GAD++VVG+ + ++ K +N
Sbjct: 180 NSKRVFDSGADVIVVGTFLAEKPTKLKIKKLIN 212
>gi|323129886|gb|ADX17316.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
Length = 214
Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y
Sbjct: 1 MEVPMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q + + DGG+T
Sbjct: 121 TPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHF--PAAECWADGGITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
R + L AGA LV+G + F
Sbjct: 179 RAARLLAAAGAQHLVIGRALF 199
>gi|160914681|ref|ZP_02076895.1| hypothetical protein EUBDOL_00688 [Eubacterium dolichum DSM 3991]
gi|158433221|gb|EDP11510.1| hypothetical protein EUBDOL_00688 [Eubacterium dolichum DSM 3991]
Length = 218
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
Query: 16 FSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSID 75
+ + I + + +H+DV+DG F FG +++ + Y+ HL +
Sbjct: 3 LGHIEKSIQELNVSEINGLHYDVVDGIFNDCFIFGDKILQVISEYTKLPILVHLACENPF 62
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET-PVAILEDVIDEID 134
++ + +G I H E++ +L I +G +A +T P + D
Sbjct: 63 PYLKPMIRSGASEIAIHYEATVDCMETLNIIKQLGACAVLAFKCDTSPPKDFLSLAKVAD 122
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGAD 192
IL +TVNPG+ GQ + + +RQ + L+ + I +EVDG + I ++AGAD
Sbjct: 123 KILKLTVNPGYAGQTIHLDALEHVRQMRELLNQAKIYRRIEVDGNINQTTINRCIEAGAD 182
Query: 193 LLVVGSS-FFNQKG 205
+GSS F Q+
Sbjct: 183 TFTLGSSGLFLQED 196
>gi|260459932|ref|ZP_05808185.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
gi|259034143|gb|EEW35401.1| ribulose-phosphate 3-epimerase [Mesorhizobium opportunistum
WSM2075]
Length = 240
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S +AD + + ++ I H DV DG F P+ F D++ + + HL
Sbjct: 25 SSWSADLANIESDLRRIEP-YVDLHHVDVADGHFAPSFLFFPDLVARIAKLTAKPIHVHL 83
Query: 70 MISS--IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ + +++ +AG D+I+ H E+ R++R +G + GV + ETPV +
Sbjct: 84 MVDAGIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVEAVT 143
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS----ISLEVDGGVTSRNI 183
+ EI + ++ G GQ L E ++R A+A++ K + L DGG+
Sbjct: 144 PFVSEIAFVTLLGTAIGVKGQSLSEKACDRLRAARAILRKAGREAAVVLAADGGIRHETG 203
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L AGA+ +V+GS F K L+ LK +A
Sbjct: 204 PLLRAAGAETVVLGSLAFGDKDLAGRIAWLHGLKVAA 240
>gi|222082871|ref|YP_002542236.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
gi|221727550|gb|ACM30639.1| ribulose-phosphate 3-epimerase [Agrobacterium radiobacter K84]
Length = 241
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 7/213 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + + ++ I H DV D F P F D + + + HL
Sbjct: 25 SLWSADLANMETDLKRIEP-YVDLHHIDVADARFTPGFLFFPDFVARIAKSTAKPIHVHL 83
Query: 70 MISS--IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ + ++ +AG D+I+ H E+ R++ +G + GV + ETPV+ ++
Sbjct: 84 MVEAEIVEEQTRQFIEAGADLISVHAENGEAGLRAVALAKELGAEAGVVLRLETPVSAIK 143
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV----DGGVTSRNI 183
I+ + + ++ + G GQ L E ++ +A+AL+ + +V DGG+ + +
Sbjct: 144 PFIEHVAFVTLLGTSIGVKGQSLSEKACGRLIEARALLKQADREDQVILAADGGIREQTV 203
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L AGA +V+GS F K + L+ L
Sbjct: 204 PELRAAGAQTVVLGSLAFGDKDLGKRIEWLHGL 236
>gi|13476026|ref|NP_107596.1| ribulose-5-phosphate 3-epimerase [Mesorhizobium loti MAFF303099]
gi|14026786|dbj|BAB53382.1| ribulose-5-phosphate 3-epimerase [Mesorhizobium loti MAFF303099]
Length = 240
Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +A+ + ++ I H DV DG F P+ F D++ + + HL
Sbjct: 25 SLWSANLANFESDLRRIEPH-VDLHHIDVADGHFAPSFLFFPDLVARIAGLTAKPIHVHL 83
Query: 70 MISS--IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ + +++ +AG D+I+ H E+ R++R +G + GV + ETPV ++
Sbjct: 84 MVDAAIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVEAVK 143
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV----DGGVTSRNI 183
+ E+ + ++ G GQ L + ++ A+A++ EV DGG+ +
Sbjct: 144 PFVSEVAFVTLLGTAIGVKGQSLSDKACDRLGAARAILRGAGREAEVALAADGGIRHETV 203
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L AGA+ +V+GS F K L+ LK +A
Sbjct: 204 PLLRAAGAETVVLGSLAFGDKDLAGRIGWLHGLKVAA 240
>gi|167549905|ref|ZP_02343663.1| protein SgcE [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205324917|gb|EDZ12756.1| protein SgcE [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 210
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y+
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|213162191|ref|ZP_03347901.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 185
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y
Sbjct: 1 MKVPMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 SRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q++ + DGG+T
Sbjct: 121 TPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITL 178
Query: 181 RNIKSLV 187
R + L
Sbjct: 179 RAARLLA 185
>gi|319784864|ref|YP_004144340.1| Ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170752|gb|ADV14290.1| Ribulose-phosphate 3-epimerase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 240
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +A+ + ++ I H DV DG F P+ F D++ + + HL
Sbjct: 25 SLWSANLANFENDLKRIEP-YVDLHHIDVADGHFAPSFLFFPDLVARIAGLTAKPIHVHL 83
Query: 70 MISS--IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+ +++ +AG D+I+ H E+ R++R +G + GV + ETPV +
Sbjct: 84 MVDEAIVEAQTRQFIEAGADMISVHAENGEAGLRAVRLARELGAEAGVVLRLETPVEAVT 143
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV----DGGVTSRNI 183
+ E+ + ++ G GQ L + ++ +A++ K +V DGG+ +
Sbjct: 144 AFVPEVAFVTLLGTAIGVKGQSLSDKACDRLGATRAILRKAGREAQVVLAADGGIRHETV 203
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L AGA+ +V+GS F K L+ LK +A
Sbjct: 204 PLLRAAGAETVVLGSLAFGDKDLAGRIGWLHGLKVAA 240
>gi|168241167|ref|ZP_02666099.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194451933|ref|YP_002045656.1| epimerase [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194410237|gb|ACF70456.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205339520|gb|EDZ26284.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
Length = 210
Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSLHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 SYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|264658027|emb|CBH31233.1| putative ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Simulium squamosum]
Length = 148
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 72/148 (48%), Positives = 95/148 (64%), Gaps = 8/148 (5%)
Query: 8 VPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDC 67
PSIL+ADF++LGEE+ I IH DVMDG FVP I+ G DVI ++R YS FD
Sbjct: 1 APSILSADFAKLGEEVKRIDGLNVDYIHIDVMDGNFVPKITIGPDVISAIRKYSSLPFDV 60
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG--------KKTGVAINP 119
HLMI+S +H+ +AG DIIT H E+ H+ R ++ I + + GV+I P
Sbjct: 61 HLMINSPQNHVERFINAGADIITIHTETEVHLERLIKKIRSYKNINNEKKMIEVGVSIVP 120
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGG 147
T ++LE +IDE+D+ILIMTVNPGFGG
Sbjct: 121 STSPSVLEYIIDELDIILIMTVNPGFGG 148
>gi|238927311|ref|ZP_04659071.1| possible ribulose-phosphate 3-epimerase [Selenomonas flueggei ATCC
43531]
gi|238884593|gb|EEQ48231.1| possible ribulose-phosphate 3-epimerase [Selenomonas flueggei ATCC
43531]
Length = 212
Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D L + I + ++ H+DV+DG F + G + L+ S + HL +
Sbjct: 1 MDIGHLSDAIDKVNRSDVAFWHYDVVDGVFNQCLILGDLLYPYLKEKSRLPIEIHLAVEQ 60
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV-AILEDVIDE 132
+ +I+I + D I H E+ R R I G +A ETP D+ +
Sbjct: 61 PERYIDIFSRYKLDYIAVHAETMNEPERVFRRIRECGALPVLAYRAETPPGEDFVDLAKK 120
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAG 190
+L +TVNPGF GQ++ ++ + IR+ + I ++ DG V + + +L +AG
Sbjct: 121 CAWVLKLTVNPGFSGQKIQDAAVRHIREMSDRLIHAGIGCRIQADGNVNEKTVHTLYEAG 180
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
A + GSS K S + + L +SA
Sbjct: 181 ARIFTGGSSGLFTKER-SIQENVVRLIQSA 209
>gi|168235736|ref|ZP_02660794.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168462937|ref|ZP_02696868.1| protein SgcE [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194738190|ref|YP_002114641.1| epimerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194713692|gb|ACF92913.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195634309|gb|EDX52661.1| protein SgcE [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197291158|gb|EDY30511.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 210
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|326627771|gb|EGE34114.1| epimerase [Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 214
Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 2/201 (0%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M S+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ +
Sbjct: 1 MEVSMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQH 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 TRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP+ + ++D ++IMT P GQQ I + K+ Q + + DG +T
Sbjct: 121 TPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHF--PAAECWADGSITL 178
Query: 181 RNIKSLVQAGADLLVVGSSFF 201
R + L AGA LV+G + F
Sbjct: 179 RAARLLAAAGAQHLVIGRALF 199
>gi|238911853|ref|ZP_04655690.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 210
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|16760263|ref|NP_455880.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|25292418|pir||AC0667 ribulose-phosphate 3-epimerase (EC 5.1.3.1) - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502558|emb|CAD01708.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 210
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ ++ DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAVECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|168230033|ref|ZP_02655091.1| protein SgcE [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194469708|ref|ZP_03075692.1| protein SgcE [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456072|gb|EDX44911.1| protein SgcE [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205335452|gb|EDZ22216.1| protein SgcE [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 210
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSLHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|168260189|ref|ZP_02682162.1| protein SgcE [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|194442867|ref|YP_002040863.1| epimerase [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|197263162|ref|ZP_03163236.1| protein SgcE [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|194401530|gb|ACF61752.1| protein SgcE [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|197241417|gb|EDY24037.1| protein SgcE [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205350774|gb|EDZ37405.1| protein SgcE [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
Length = 210
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVNQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|200390471|ref|ZP_03217082.1| protein SgcE [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204927495|ref|ZP_03218696.1| protein SgcE [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|199602916|gb|EDZ01462.1| protein SgcE [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322837|gb|EDZ08033.1| protein SgcE [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|322614867|gb|EFY11792.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322619308|gb|EFY16188.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322623120|gb|EFY19962.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322628410|gb|EFY25198.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634816|gb|EFY31547.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322638618|gb|EFY35313.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322640993|gb|EFY37640.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322645424|gb|EFY41952.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322651690|gb|EFY48062.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322654407|gb|EFY50729.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322661249|gb|EFY57475.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665023|gb|EFY61211.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322667767|gb|EFY63927.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322671821|gb|EFY67942.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322677133|gb|EFY73197.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322680203|gb|EFY76242.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322685367|gb|EFY81363.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323194746|gb|EFZ79935.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323204403|gb|EFZ89411.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323205820|gb|EFZ90783.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323213875|gb|EFZ98650.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323218229|gb|EGA02940.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323219089|gb|EGA03593.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323223897|gb|EGA08195.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323232009|gb|EGA16116.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323234536|gb|EGA18623.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323237988|gb|EGA22047.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243410|gb|EGA27429.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323246433|gb|EGA30415.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323253718|gb|EGA37545.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323257707|gb|EGA41391.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323260802|gb|EGA44406.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323266531|gb|EGA50018.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323271255|gb|EGA54682.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
Length = 210
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|197250246|ref|YP_002146419.1| epimerase [Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197213949|gb|ACH51346.1| protein SgcE [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
Length = 210
Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|62180183|ref|YP_216600.1| epimerase [Salmonella enterica subsp. enterica serovar Choleraesuis
str. SC-B67]
gi|62127816|gb|AAX65519.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 210
Score = 156 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSLHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 SYRYLALQLDALMIMTSEPDGRGQQFIATMCEKVSQSRDHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|29141970|ref|NP_805312.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213426263|ref|ZP_03359013.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586339|ref|ZP_03368165.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213857384|ref|ZP_03384355.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289825669|ref|ZP_06544840.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|291080768|ref|ZP_06535058.2| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
gi|29137599|gb|AAO69161.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
Length = 210
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|16764961|ref|NP_460576.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|161613925|ref|YP_001587890.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167992788|ref|ZP_02573884.1| protein SgcE [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|16420142|gb|AAL20535.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|161363289|gb|ABX67057.1| hypothetical protein SPAB_01663 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205329015|gb|EDZ15779.1| protein SgcE [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|261246810|emb|CBG24624.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267993542|gb|ACY88427.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158145|emb|CBW17642.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312912605|dbj|BAJ36579.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321224240|gb|EFX49303.1| Protein sgcE [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|332988504|gb|AEF07487.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 210
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y+
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q + + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|207856889|ref|YP_002243540.1| epimerase [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|206708692|emb|CAR33018.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
Length = 210
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q + + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|168819402|ref|ZP_02831402.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205343806|gb|EDZ30570.1| protein SgcE [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320085894|emb|CBY95668.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 210
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + +H D+ D F+ NI+FG I+++ Y+
Sbjct: 1 MILHPSLASADPLRYAEALTALHDVPLGSLHLDIEDTSFINNITFGMKTIQAVAQYTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q++ + DGG+T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|255030827|ref|ZP_05302778.1| hypothetical protein LmonL_20056 [Listeria monocytogenes LO28]
Length = 170
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 89/165 (53%), Gaps = 2/165 (1%)
Query: 56 SLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
+++ + + D HL + D +++ A ++FH E+S + ++ I +G + +
Sbjct: 1 DIKNNTKMLLDIHLATVNPDKFVDLYAAIKPAYMSFHLEASRDVNATINHIRELGIRPSI 60
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LE 173
AI+P+T + + + ++DM+L+MTVNPGF GQ+ + KI++ + + + +E
Sbjct: 61 AISPDTEIEQIYPFLGKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIE 120
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
VDG ++ L GAD+ VVG++ + SY ++L L++
Sbjct: 121 VDGNXFEETVRLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLRE 165
>gi|328477233|gb|EGF47425.1| ribulose-phosphate 3-epimerase [Lactobacillus rhamnosus MTCC 5462]
Length = 158
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/158 (38%), Positives = 94/158 (59%)
Query: 60 YSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
+S +FD H+M++ + H+ G ++++ H ES+PH+ L+ I G+K G+ +NP
Sbjct: 1 HSKMIFDIHMMLAHPEDHLEATLATGAEMLSVHYESTPHVHWVLQQIKQAGRKAGIVLNP 60
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP +L ++DEID +L+M++NPG GQ + + KIR+ K +IG+R I +EVDGGV
Sbjct: 61 GTPETVLPYLLDEIDYVLVMSINPGRPGQSFLPLALDKIRRVKQMIGERPIQIEVDGGVN 120
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ AGADLLVVG F + YAK +K
Sbjct: 121 DVHAAEAKAAGADLLVVGGFLFGKDPHAQYAKLNAAIK 158
>gi|213619061|ref|ZP_03372887.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 179
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 2/177 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS
Sbjct: 1 PMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRH 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 PLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPL 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ ++D ++IMT P GQQ I + K+ Q++ ++ DGG+T
Sbjct: 121 LPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAVECWADGGITL 175
>gi|205352703|ref|YP_002226504.1| epimerase [Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|205272484|emb|CAR37373.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
Length = 210
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 2/197 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPPEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++D ++IMT P GQQ I + K+ Q + + DG +T R +
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQGREHF--PAAECWADGSITLRAAR 178
Query: 185 SLVQAGADLLVVGSSFF 201
L AGA LV+G + F
Sbjct: 179 LLAAAGAQHLVIGRALF 195
>gi|163790119|ref|ZP_02184553.1| allulose-6-phosphate 3-epimerase [Carnobacterium sp. AT7]
gi|159874610|gb|EDP68680.1| allulose-6-phosphate 3-epimerase [Carnobacterium sp. AT7]
Length = 188
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 45 PNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSL 103
PNI+ I +R SD HLM++ + + D C++I H E + R +
Sbjct: 2 PNITLSPWFIEEVRKISDLPMSVHLMVTDPSFWVQQLVDMKCELICMHAEVLDGLAFRLI 61
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I G K GV +NPETP+ + I+ +D I IMTV+PGF GQ+LI+ST+ KI +
Sbjct: 62 DQIQNAGLKAGVVLNPETPIETIFPYIELVDKITIMTVDPGFAGQRLIDSTLDKIVSLRE 121
Query: 164 LIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
L + +E+DG ++ K + A D+ ++G S F +I + +
Sbjct: 122 LREENGYQYVIEMDGSSNRKSFKRIDAADPDIYIIGRSGLFGLDEDIEKSWGI 174
>gi|309777992|ref|ZP_07672934.1| putative ribulose-phosphate 3-epimerase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308914281|gb|EFP60079.1| putative ribulose-phosphate 3-epimerase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 221
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
D + + ++ I + +H+D++DG F FG +++ R Y+ HL +
Sbjct: 1 MDLGNIEKGMNEINHSRIHGLHYDIVDGVFNSCFIFGDQMLKVFRRYTALPIIVHLACQN 60
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV-AILEDVIDE 132
+I G D I H E+ + + I +G K +A +T V D+ +
Sbjct: 61 PIPYIKPCITNGADYIAVHYEAEADLLSVFQMIRELGGKPILAFRCDTSVPHNFTDIAAQ 120
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAG 190
+ IL ++V+PGF GQ + + I + L+ I +EVDG +++ I+ AG
Sbjct: 121 AEWILKLSVHPGFSGQVFQKEALSHIAEMHQLLTAAGIDKRIEVDGNISTATIQECAIAG 180
Query: 191 ADLLVVGSSFFNQK 204
A + G+S
Sbjct: 181 ATMFTGGTSGLFHP 194
>gi|26553759|ref|NP_757693.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma penetrans HF-2]
gi|26453766|dbj|BAC44097.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma penetrans HF-2]
Length = 216
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 9/220 (4%)
Query: 1 MTPSIQIVPSILAADFS---RLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL 57
M I++ S+LA D + E++ + K K IH+D+MD FVPN SF
Sbjct: 1 MEKIIEL--SVLALDQKDENKFKEQLESCLKNNIKDIHYDIMDNKFVPNTSFNNLEFLDY 58
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESS--PHIRRSLRTIHAMGKKTGV 115
HLM+ ++ +++ + ITFH E+ + TI K G+
Sbjct: 59 LIEKGCNVSAHLMVENVAHYVDKLITKKVKYITFHCEAQTIEESISIINTIKKHNIKAGI 118
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
AI P + + E +I D I +M+V PGFGGQ+ IE++ +IR+ K L +++ +E+D
Sbjct: 119 AIKPNSSLKEYESLIKISDKITVMSVEPGFGGQKYIENSEIRIREIKKL-SHKNLIVEID 177
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ + I A V GS FN + K+L D
Sbjct: 178 GGINDQTILLCKDD-ATHFVTGSFLFNNLEKFEELKKLLD 216
>gi|300708764|ref|XP_002996555.1| hypothetical protein NCER_100333 [Nosema ceranae BRL01]
gi|239605866|gb|EEQ82884.1| hypothetical protein NCER_100333 [Nosema ceranae BRL01]
Length = 210
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 113/217 (52%), Gaps = 12/217 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SIL ++ + + ++ + +H D++D VPNISFG ++I + Y D +F
Sbjct: 1 MISVSILDSNLLNIEKSLTELKNNNINHLHLDILDTSLVPNISFGPNIINQILKY-DFIF 59
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
D HLM+ + + ++ DI+ H E + + + + KK G+ I+P V
Sbjct: 60 DVHLMVKDPITILQLLDLEKIDIVFIHYEINNMLH-VVEFLVKNNKKIGLTISPNISVKT 118
Query: 126 L----EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ E ++ ++ ILIMTV PGFG Q+ I KI+ +I K+ S+ VDGG++
Sbjct: 119 IFSLPERILQNVNTILIMTVYPGFGNQKFINECAEKIK----MIDKKRYSVAVDGGISIN 174
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I+++ G D +V+GS++F + + + + ++ K
Sbjct: 175 TIRNVK--GYDKIVIGSAYFKAENKKVFLNEIEEILK 209
>gi|302337342|ref|YP_003802548.1| ribulose-phosphate 3-epimerase [Spirochaeta smaragdinae DSM 11293]
gi|301634527|gb|ADK79954.1| Ribulose-phosphate 3-epimerase [Spirochaeta smaragdinae DSM 11293]
Length = 230
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 6/212 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ + + L + I+ TK A H DV D FVP + F D+I ++ +D HL
Sbjct: 19 SLWSGNLVNLEKSINE-TKNYADVYHLDVSDAHFVPGLLFFPDLIHAINMKTDIPLHTHL 77
Query: 70 MISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M+ H++ ++G D IT H E + + + G++I E+ + +LE
Sbjct: 78 MMEDPIKHVDAFIESGSDFITVHLELGEKKVGEIIAYLKKKCIHVGLSICVESDIMLLEK 137
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS----LEVDGGVTSRNIK 184
+D++D+IL+M G G + ++T +++ KA+I + L VDGG+ +
Sbjct: 138 YLDDLDLILLMGTKIGIKGVSMEKNTPDRVKGIKAMIQAHGLENKIILSVDGGIREHTVP 197
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L +AGAD++ GS FN K L+ L
Sbjct: 198 LLREAGADMITPGSLVFNSKNLTDTVSWLHTL 229
>gi|303389664|ref|XP_003073064.1| D-ribulose 5 phosphate 3 epimerase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302208|gb|ADM11704.1| D-ribulose 5 phosphate 3 epimerase [Encephalitozoon intestinalis
ATCC 50506]
Length = 220
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 12/211 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SIL DF RL EE+ ++ + G +H DVMD FV NI+FG +I + + D VF
Sbjct: 5 KIGISILDCDFLRLEEELQDLKRNGVTNVHLDVMDTTFVKNITFGPCIINRILEH-DFVF 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR-TIHAMGKKTGVAINPETPVA 124
D H+M+ S I I ++T H E S +R +R + G+AINPET V
Sbjct: 64 DIHMMVESPLDVIMRIDLRKVTLVTIHHEISN--KRGVREYLKQRDVLFGIAINPETRVE 121
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ ++ ID +L+M+V+PGFGGQ+ + K+ + + I
Sbjct: 122 EVG--MEGIDFVLVMSVSPGFGGQRFQRECLAKVEEIQRSGKIVGIDGG-----IGIENI 174
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ G D VVGS +F K + + + +
Sbjct: 175 KEIR-GVDYAVVGSGYFRSKDRKRFLEEITE 204
>gi|322818995|gb|EFZ26255.1| ribulose-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 162
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 12 LAADFSRLGEEISNI---TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY-SDSVFDC 67
+ AD ++L E ++ + +H DV+DG F PN+SF +D + LR + D
Sbjct: 1 MVADPTQLLLEALHVLSPEGGAVEWLHVDVIDGHFAPNLSFCSDTVAGLRRHLPHVFLDV 60
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
HLM++ + + ADAG TFH E++ I G + GVAI+P T + L
Sbjct: 61 HLMVAEPEKWVRPFADAGASQFTFHIEATQEPVALASKIRETGMQVGVAISPRTAIDGLI 120
Query: 128 DVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
+I+ +DM+L+MTV PGF GQ+ + + K+RQ +
Sbjct: 121 PLIENGYLDMVLVMTVEPGFAGQKFLSGPLAKVRQLR 157
>gi|116248709|ref|YP_764550.1| putative D-allulose-6-phosphate 3-epimerase [Rhizobium
leguminosarum bv. viciae 3841]
gi|115253359|emb|CAK11747.1| putative D-allulose-6-phosphate 3-epimerase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 233
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 7/213 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD RL ++++ + + +H DV DG F P + F D++ +R S HL
Sbjct: 22 SVWSADLVRLADDLARVDRH-VDVLHIDVADGHFAPAMLFFPDLVAGVRKVSARPIHVHL 80
Query: 70 MISSID--SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M+S S I ADAG D+I+ H E+ +L + G G+ + +TPV +E
Sbjct: 81 MVSDSILLSQIEQFADAGSDLISLHVENESVAAEALDLLDRRGVAAGMVLKVDTPVERVE 140
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI----GKRSISLEVDGGVTSRNI 183
+ + ++ G GQ L E +++QAK +I I L DGG+ +
Sbjct: 141 KYASRLRFVTLLGTAIGVKGQGLDEKAGARLQQAKQIIAGCGAAHRIVLAADGGIREHTV 200
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L Q+GA+ +V+GS FN + L
Sbjct: 201 PLLRQSGAETVVLGSLAFNAPSLDERMAWVRAL 233
>gi|255019027|ref|ZP_05291153.1| hypothetical protein LmonF_17081 [Listeria monocytogenes FSL
F2-515]
Length = 120
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 50/116 (43%), Positives = 72/116 (62%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
HLM+S+ +++I A AG II+ H E++PHI R ++ I A G K GV +NP TP
Sbjct: 64 VHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQIKAAGCKAGVVLNPGTP 119
>gi|209547488|ref|YP_002279406.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538732|gb|ACI58666.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 233
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 7/213 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD RL +++ + +H DV DG F P + F D++ +R S HL
Sbjct: 22 SVWSADLMRLADDLGRV-DPYVDILHIDVADGHFAPAMLFFPDLVAGVRKVSTRPIHVHL 80
Query: 70 MISS--IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M++ I S I ADAG D+I+ H E+ +L + G G+ + +TPV +E
Sbjct: 81 MVADSIILSQIEQFADAGSDLISLHVENESVANEALDLLDRRGVAAGMVLKVDTPVERIE 140
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI----GKRSISLEVDGGVTSRNI 183
+ + ++ G GQ L E +++QAK +I I L DGG+ +
Sbjct: 141 TYASRLRFVTLLGTAIGVKGQGLDEKAGARLQQAKRIIAGCGAADRIVLAADGGIREHTV 200
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L Q+GA+ +V+GS FN + L
Sbjct: 201 PLLRQSGAETVVLGSLAFNAPSLDERMAWMRAL 233
>gi|225012462|ref|ZP_03702898.1| ribulose-phosphate 3-epimerase [Flavobacteria bacterium MS024-2A]
gi|225003439|gb|EEG41413.1| ribulose-phosphate 3-epimerase [Flavobacteria bacterium MS024-2A]
Length = 233
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 16/234 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
I+I + D+ L + + T+AGA IH D D + N+ G +I +RS
Sbjct: 1 MKKIKIAAGLAHVDYGHLADIVKEATEAGADYIHSDAADMHDLKNMQLMGGHQIIEGIRS 60
Query: 60 YSDSVFDCHLMISSID-SHINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVA 116
++D +CH+ + D I +A G +++ E + + K G+
Sbjct: 61 HTDKPIECHIYTKTCDLLFIEKLAQVGTNMLILPAEHFIGAPLAYIINWCRERSMKVGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTV----NPGFGGQQLIESTIPKIRQAKALIGKRS--I 170
I TP++ +E+ I +ID + I+ G S + +++A+ L+ +++
Sbjct: 121 IGLYTPLSFVEESIYDIDRLHIVVHGVDETDGKDNWGWRSSCLDLLKRARTLVDEKNPKC 180
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+ +DGG+ S N+ L+ D++V+ S+ F I+ LK+ A AI+
Sbjct: 181 EIAIDGGIRSENLAPLIACKPDVVVLSSAIFKDPEGITAG-----LKRCAKAIE 229
>gi|213029389|ref|ZP_03343836.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 169
Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 82/166 (49%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M + + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ Y
Sbjct: 1 MKVPMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQY 60
Query: 61 SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
S HLM+SS + +A I H ES + L I A+G K G+A+NP
Sbjct: 61 SRHPLSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPA 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
TP+ + ++D ++IMT P GQQ I + K+ Q++
Sbjct: 121 TPLLPYRYLALQLDALMIMTSEPDGRGQQFIAAMCEKVSQSREHFP 166
>gi|114685771|ref|XP_001136386.1| PREDICTED: similar to Ribulose-5-phosphate-3-epimerase [Pan
troglodytes]
Length = 159
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
H+M+S + + +A G + FH E + + ++ I G K G+AI P T V L
Sbjct: 1 MHVMVSKPEQWVKPMAIRGANQYIFHLEETENPGALIKDIQENGMKVGLAIKPGTSVQYL 60
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+++ M L+MTV PGFGG + ++ + K+ + I S+++EV GG+ +
Sbjct: 61 APWANQLGMTLVMTVEPGFGGHKFMKDMMLKVHWLR--IQFPSLAIEVAGGIDPDTVHRC 118
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+A A+++V GS+ + S L ++ A D
Sbjct: 119 AEAEANMIVSGSAIVRSEDPRSVISLLRNVCSEAAQKD 156
>gi|220941751|emb|CAX15452.1| ribulose-5-phosphate-3-epimerase [Danio rerio]
Length = 137
Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 53 VIRSLRSY--SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG 110
++ LRS D FD H+M+S + + +A AG + TFH E++ + ++ I G
Sbjct: 1 MVECLRSCIGPDPFFDMHMMVSRPEQWVKPMAAAGANQYTFHLEATSNPGNLIKEIRESG 60
Query: 111 KKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI 170
K G+AI P T V L +IDM L+MTV PGFGGQ+ +E +PK+ + S+
Sbjct: 61 MKVGLAIKPGTTVEELAPWAGQIDMALVMTVEPGFGGQKFMEDMMPKVSWLRGQF--PSL 118
Query: 171 SLEVDGGVTSRNIKSLVQA 189
+EVDGGV +I +A
Sbjct: 119 DIEVDGGVGPDSIHRCAEA 137
>gi|313899910|ref|ZP_07833413.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
gi|312955525|gb|EFR37190.1| putative ribulose-phosphate 3-epimerase [Clostridium sp. HGF2]
Length = 238
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 16/234 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
I+I + ++ R+ + + ++ AG IH D D + N+ G +I +R
Sbjct: 1 MKHIKIAAGLAHVNYGRIADLVKEVSDAGVDYIHSDAADMHDLQNMKLMGGHQIIAGIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVA 116
+D +CH+ S+D I I +AG D++ E + + K G+
Sbjct: 61 ETDKPIECHIYTVSMDRMFIEQIDEAGADMLIIPAEHFIGAQLAYIINWCRERHIKVGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTV----NPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
+ TP+ +E+ I +ID + I+T G +S I +++A+ +I +++
Sbjct: 121 LGCYTPLCFVEESIYDIDRLHIVTHGVDETDGKDNWGWRKSAIDLVQRARKMIDEKNPKC 180
Query: 173 E--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
E VDGG+ + N+ L++ D++V+ S+ F + +KK AID
Sbjct: 181 ELAVDGGLRADNMDKLIECNPDVIVLSSAIFKDPDGAAAG-----VKKCRAAID 229
>gi|149189481|ref|ZP_01867765.1| Ribulose-phosphate 3-epimerase [Vibrio shilonii AK1]
gi|148836638|gb|EDL53591.1| Ribulose-phosphate 3-epimerase [Vibrio shilonii AK1]
Length = 238
Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 12/233 (5%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
++I + D+ + + + ++ AGA IH D D + N+ G ++ +R
Sbjct: 1 MKKVKIAAGLAHVDYGHMADIVKEVSDAGADYIHCDAADMHDLKNMQLMGGHQIVEGIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVA 116
Y++ + H D + IA AG D++ E+ + ++ K G+
Sbjct: 61 YTEKPIEVHAYFKDCDRLFVEKIAKAGADMLILPAENFLGAPLAYMMKYCRDYNMKFGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--V 174
+ TPV+ +++ I +D + I+ ES I IR+A+ LI +R+ + E V
Sbjct: 121 VGCFTPVSFVKEAIYYLDRLHIVIHGVNNDEWLWRESAIEMIREARQLINERNPNCELCV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQK-----GEISYAKRLNDLKKSALA 222
DGG+ + N+++L++ D++V ++ F + G + + L+ +K+ A
Sbjct: 181 DGGIRNHNLEALLKEDIDVMVASTNIFGHEKGITAGVHEFREALDKAEKNVAA 233
>gi|241113559|ref|YP_002973394.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240861767|gb|ACS59433.1| ribulose-phosphate 3-epimerase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 233
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 7/213 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD L ++++ + +H DV DG F P + F D++ +R S HL
Sbjct: 22 SVWSADLVHLADDLARVDPH-VDILHIDVADGHFAPAMLFFPDLVAGVRKVSARPIHVHL 80
Query: 70 MISSID--SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
M++ S I ADAG D+I+ H E+ +L + G G+ + +TPV +E
Sbjct: 81 MVADSILLSQIEQFADAGSDLISLHVENESVAVEALDLLDRRGVAAGMVLKVDTPVERVE 140
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI----GKRSISLEVDGGVTSRNI 183
+ + ++ G GQ L E +++QAK +I I L DGG+ +
Sbjct: 141 RYASRLRFVTLLGTAIGVKGQGLDEKAGARLQQAKQIIAGCGAAHRIVLAADGGIREHTV 200
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L Q+GA+ +V+GS FN + L
Sbjct: 201 PLLRQSGAETVVLGSLAFNAPSLDERMAWVRAL 233
>gi|313606427|gb|EFR83313.1| ribulose-phosphate 3-epimerase, ic [Listeria monocytogenes FSL
F2-208]
Length = 123
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST 154
++PHI R ++ I A G K GV +NP TP ++L+ V+ ++D++L MTVNPGFGGQ I+ST
Sbjct: 1 AAPHIHRVIQQIKAAGCKAGVVLNPGTPASVLDAVLADVDLVLQMTVNPGFGGQPFIDST 60
Query: 155 IPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
I +R + + +EVDGGV + + QAG D+LV GS FF +++ +
Sbjct: 61 IKNMRYLDNWRRENNGSYVIEVDGGVNAETAEKCKQAGVDVLVAGSYFFGATDKVACIQG 120
Query: 213 LND 215
L
Sbjct: 121 LKK 123
>gi|56415925|ref|YP_153000.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197364852|ref|YP_002144489.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|81599633|sp|Q5PJE1|LSRE_SALPA RecName: Full=Putative epimerase lsrE
gi|56130182|gb|AAV79688.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197096329|emb|CAR61932.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 254
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVEQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + K A
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFRDDRLAENTRSWRAMFKVA 244
>gi|261250717|ref|ZP_05943291.1| ribulose-phosphate 3-epimerase [Vibrio orientalis CIP 102891]
gi|260937590|gb|EEX93578.1| ribulose-phosphate 3-epimerase [Vibrio orientalis CIP 102891]
Length = 240
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 7/215 (3%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
++I + D+ + + + ++ AGA IH D D + N+ G ++ +R
Sbjct: 1 MKKVKIAAGLAHVDYGHMADIVKEVSDAGADYIHCDAADMHDLKNMQLMGGHQIVEGIRQ 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVA 116
Y+D + H D + IA AG D++ E+ + ++ K G+
Sbjct: 61 YTDKPIEVHAYFKDCDRLFVEKIAAAGADMLILPAENFLGAPLAYMMKYCRDYNMKFGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE--V 174
+ TPV+ +++ I +D + I+ ES I IR+A+ LI +R+ + E V
Sbjct: 121 VGCFTPVSFVKEAIYYLDRLHIVIHGVNNDEWLWRESAIEMIREARQLINERNPNCELCV 180
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
DGG+ + N+++L++ D++V ++ F + I+
Sbjct: 181 DGGIRNHNLEALLKEDIDVMVASTNIFGHEKGITA 215
>gi|2462256|emb|CAA65631.1| pentose-5-phosphate 3-epimerase [Chlamydomonas reinhardtii]
Length = 143
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/137 (39%), Positives = 81/137 (59%), Gaps = 5/137 (3%)
Query: 89 ITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
+ H E S+ H+ R+L + +G K GV +NP T ++ +E+V+D +D+ILIM+VNPGFG
Sbjct: 3 YSVHAEQSSTIHLHRTLNMVKDLGCKAGVVLNPGTSLSTIEEVLDVVDLILIMSVNPGFG 62
Query: 147 GQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSL-VQAGADLLVVGSSFFNQ 203
GQ+ IES + KIR K + ++ ++ +EVDGGVT N + GA+ LV GS+ F
Sbjct: 63 GQKFIESQVAKIRNLKRMCNEKGVNPWIEVDGGVTPENAYKVNSMTGANALVAGSAVFKA 122
Query: 204 KGEISYAKRLNDLKKSA 220
K + K A
Sbjct: 123 KSYRDAIHGIKVSKAPA 139
>gi|331695105|ref|YP_004331344.1| Ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
gi|326949794|gb|AEA23491.1| Ribulose-phosphate 3-epimerase [Pseudonocardia dioxanivorans
CB1190]
Length = 240
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + LG E++ +T A H D D FVP+ F D++ +LRS++ F H+
Sbjct: 18 SLWSADLADLGAEVARLTP-YADVFHIDASDTRFVPSPLFFPDLVAALRSHTQVPFHVHV 76
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
M + A AG D+++ H E+ + +L+ I G G+A+ +TPV +E
Sbjct: 77 MAEHALPLVEDFARAGVDLLSVHAEA-DDVADALQAIRTRGGAAGLALRLDTPVDTVEAH 135
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL---IGKRSISLEVDGGVTSRNIKSL 186
+D+ID ++++ G G + + ++RQ +AL G+ + + DGG+ + L
Sbjct: 136 LDDIDFVVLIGTPLGTKGTTMDPAAPDRVRQLRALAARTGQDQLPVIADGGIRENTVPEL 195
>gi|309778132|ref|ZP_07673069.1| putative ribulose-phosphate 3-epimerase [Erysipelotrichaceae
bacterium 3_1_53]
gi|308914138|gb|EFP59941.1| putative ribulose-phosphate 3-epimerase [Erysipelotrichaceae
bacterium 3_1_53]
Length = 238
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 105/234 (44%), Gaps = 16/234 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
I+I + ++ R+ + + ++ AG IH D D + N+ G +I +R
Sbjct: 1 MKHIKIAAGLAHVNYGRIADLVKEVSDAGVDYIHSDAADMHDLQNMKLMGGHQIIAGIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVA 116
+D +CH+ S+D I I +AG +++ E + + K G+
Sbjct: 61 ETDKPIECHIYTISMDKMFIEQIDEAGANMLIIPAEHFIGAQLAYIINWCRERKIKVGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTV----NPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
+ TP+ +E+ I +ID + I+T G +S I +++A+ +I +++
Sbjct: 121 LGCYTPLCFVEESIYDIDRLHIVTHGVDETDGKDNWGWRKSAIDLVQRARKMIDEKNPKC 180
Query: 173 E--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
E VDGG+ + N+ L++ D++V+ S+ F + +KK AID
Sbjct: 181 ELAVDGGLRADNMDKLIECNPDVIVLSSAIFKDPDGAAAG-----VKKCRAAID 229
>gi|168237706|ref|ZP_02662764.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194733952|ref|YP_002117001.1| epimerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194709454|gb|ACF88675.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289437|gb|EDY28802.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 254
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ +I++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIVPILSDIEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + + K A
Sbjct: 204 QEQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 244
>gi|16762355|ref|NP_457972.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29143843|ref|NP_807185.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213162422|ref|ZP_03348132.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213426218|ref|ZP_03358968.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213581676|ref|ZP_03363502.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213646397|ref|ZP_03376450.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289828410|ref|ZP_06546292.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|81593266|sp|Q8Z2Y1|LSRE_SALTI RecName: Full=Putative epimerase lsrE
gi|25512561|pir||AE0940 probable ribulose-phosphate 3-epimerase STY3790 [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16504659|emb|CAD09543.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139479|gb|AAO71045.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 254
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + + K A
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 244
>gi|16767346|ref|NP_462961.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|62182539|ref|YP_218956.1| epimerase [Salmonella enterica subsp. enterica serovar Choleraesuis
str. SC-B67]
gi|161617213|ref|YP_001591178.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167991654|ref|ZP_02572753.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233023|ref|ZP_02658081.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168467424|ref|ZP_02701261.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194469392|ref|ZP_03075376.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197250597|ref|YP_002149008.1| epimerase [Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197263542|ref|ZP_03163616.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|75505430|sp|Q57HD7|LSRE_SALCH RecName: Full=Putative epimerase lsrE
gi|81594799|sp|Q8ZKP8|LSRE_SALTY RecName: Full=Putative epimerase lsrE
gi|209573038|sp|A9MZG7|LSRE_SALPB RecName: Full=Putative epimerase lsrE
gi|16422646|gb|AAL22920.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62130172|gb|AAX67875.1| putative ribulose-5-phosphate 3-epimerase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161366577|gb|ABX70345.1| hypothetical protein SPAB_05054 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194455756|gb|EDX44595.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|195630206|gb|EDX48846.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197214300|gb|ACH51697.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241797|gb|EDY24417.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|205329997|gb|EDZ16761.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332876|gb|EDZ19640.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|261249196|emb|CBG27058.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267996377|gb|ACY91262.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160587|emb|CBW20118.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312915196|dbj|BAJ39170.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321225371|gb|EFX50429.1| Ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322717037|gb|EFZ08608.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323132425|gb|ADX19855.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332990909|gb|AEF09892.1| epimerase [Salmonella enterica subsp. enterica serovar Typhimurium
str. UK-1]
Length = 254
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + + K A
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 244
>gi|167551426|ref|ZP_02345181.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168821568|ref|ZP_02833568.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|204930173|ref|ZP_03221150.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|238912226|ref|ZP_04656063.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|204320577|gb|EDZ05779.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323729|gb|EDZ11568.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205341805|gb|EDZ28569.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088491|emb|CBY98250.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322613157|gb|EFY10101.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322619215|gb|EFY16098.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322626082|gb|EFY22894.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322626458|gb|EFY23264.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322632428|gb|EFY29176.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322635090|gb|EFY31811.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322642708|gb|EFY39298.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322646466|gb|EFY42977.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322650746|gb|EFY47147.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322652930|gb|EFY49267.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322657244|gb|EFY53524.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322662268|gb|EFY58483.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322666802|gb|EFY62978.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322672073|gb|EFY68188.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322675794|gb|EFY71866.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322681789|gb|EFY77815.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322684015|gb|EFY80024.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323193287|gb|EFZ78502.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323197644|gb|EFZ82777.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323200781|gb|EFZ85852.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323207213|gb|EFZ92165.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323211416|gb|EFZ96257.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323218539|gb|EGA03247.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323220979|gb|EGA05411.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323225956|gb|EGA10175.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231635|gb|EGA15747.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323236117|gb|EGA20195.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323239462|gb|EGA23511.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243945|gb|EGA27956.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323249307|gb|EGA33224.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323250450|gb|EGA34333.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323258904|gb|EGA42556.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323260148|gb|EGA43771.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323265267|gb|EGA48764.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323270489|gb|EGA53935.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
Length = 254
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + K A
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFRDDRLAENTRSWRAMFKVA 244
>gi|168263016|ref|ZP_02684989.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|198244873|ref|YP_002218005.1| epimerase [Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205354344|ref|YP_002228145.1| epimerase [Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|207859267|ref|YP_002245918.1| epimerase [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|197939389|gb|ACH76722.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205274125|emb|CAR39134.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205348258|gb|EDZ34889.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206711070|emb|CAR35444.1| putative ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|326629470|gb|EGE35813.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 254
Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G + +V GS+ F + + + K A
Sbjct: 204 QDQLPSLIAQGINRVVSGSALFRDDRLVENTRSWRAMFKVA 244
>gi|200389065|ref|ZP_03215677.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199606163|gb|EDZ04708.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 254
Score = 144 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + + K A
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFRDDRLVENMRSWRAMFKVA 244
>gi|185178885|ref|ZP_02964658.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
5 str. ATCC 27817]
gi|188024027|ref|ZP_02996785.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
7 str. ATCC 27819]
gi|188518279|ref|ZP_03003802.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
11 str. ATCC 33695]
gi|188524361|ref|ZP_03004393.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|195867798|ref|ZP_03079798.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
gi|198273858|ref|ZP_03206392.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|209554009|ref|YP_002284883.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
10 str. ATCC 33699]
gi|225551465|ref|ZP_03772411.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
gi|184209141|gb|EDU06184.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
5 str. ATCC 27817]
gi|188019055|gb|EDU57095.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
7 str. ATCC 27819]
gi|188998131|gb|EDU67228.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
11 str. ATCC 33695]
gi|195660109|gb|EDX53489.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
12 str. ATCC 33696]
gi|195660495|gb|EDX53752.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
9 str. ATCC 33175]
gi|198249613|gb|EDY74395.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
4 str. ATCC 27816]
gi|209541510|gb|ACI59739.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
10 str. ATCC 33699]
gi|225379280|gb|EEH01645.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
8 str. ATCC 27618]
Length = 219
Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 6/209 (2%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+VPS+LA D + E++ K + IH+DVMD +V N +F + + L + +
Sbjct: 4 QLVPSLLAFDKKQPYEQLKIFQKHHLQTIHYDVMDLAYVNNTAFETEHLEWLLKN-NFLV 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS--LRTIHAMGKKTGVAINPETPV 123
HLM+ + I I+FH E + + + I G+AI+P +
Sbjct: 63 HIHLMVINPLQKIKQYFKYKPTHISFHFEMNDYQTNLLIIDEIKKHSIFAGIAIHPHLSL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ E+D I M+V PG GGQ +E ++ K+++ K ++ +E+DGG+T
Sbjct: 123 NDYAFYLKEVDYITFMSVVPGKGGQLFLEESLLKLQELYDYKIKNNLTFKIEIDGGITLE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYA 210
IK + D V GS ++
Sbjct: 183 IIKKI-NIPIDFFVSGSYLVRNIEKLDQI 210
>gi|168244164|ref|ZP_02669096.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194449770|ref|YP_002048082.1| epimerase [Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194408074|gb|ACF68293.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205336924|gb|EDZ23688.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 254
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLFCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + + K A
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 244
>gi|13358019|ref|NP_078293.1| d-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|167971539|ref|ZP_02553816.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 6
str. ATCC 27818]
gi|168281646|ref|ZP_02689313.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 14
str. ATCC 33697]
gi|168307788|ref|ZP_02690463.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 1
str. ATCC 27813]
gi|170762137|ref|YP_001752541.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 3
str. ATCC 27815]
gi|11270178|pir||A82888 d-ribulose-5-phosphate 3 epimerase UU456 [imported] - Ureaplasma
urealyticum
gi|6899449|gb|AAF30868.1|AE002142_2 d-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 3
str. ATCC 700970]
gi|168827714|gb|ACA32976.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 3
str. ATCC 27815]
gi|171902660|gb|EDT48949.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 1
str. ATCC 27813]
gi|182676102|gb|EDT88007.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 14
str. ATCC 33697]
gi|186700954|gb|EDU19236.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma parvum serovar 6
str. ATCC 27818]
Length = 219
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+VPS+LA D E++ K + IH+DVMD +V N +F + + L D +
Sbjct: 4 QLVPSLLAFDKKYPYEQLKIFKKHHLQTIHYDVMDLTYVNNTAFETEHLEWLLKN-DFLV 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS--LRTIHAMGKKTGVAINPETPV 123
HLM+ + I I+FH E + + + I G+AI+P +
Sbjct: 63 HIHLMVINPLEKIKQYFIYKPTRISFHFEMNDYQTNLLIINEIKKHHVLAGIAIHPCLSL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSR 181
+ E+D I M+V PG GGQ +E ++ K+++ K + +E+DGG+T
Sbjct: 123 NDYASYLKEVDYITFMSVIPGKGGQIFLEESLLKLKKLYEYKIKNNFKFKIEIDGGITLE 182
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK + D V GS K + L++
Sbjct: 183 VIKKI-NIPIDFFVSGSYL---------VKNIEKLEQ 209
>gi|15603145|ref|NP_246217.1| ribulose-phosphate 3-epimerase [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12721640|gb|AAK03364.1| Dod [Pasteurella multocida subsp. multocida str. Pm70]
Length = 229
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I ILA+D+ + + ++ +++ + +HFD+ DG F P + GA ++ S + D
Sbjct: 15 ISVGILASDWLKFADTLTTLSRHHLRLLHFDIGDGQFSPFFTVGALAVKQFP--SPWLKD 72
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK--TGVAINPETPVA 124
HLM++ ADAG DIIT E + + ++ + G+ + P+T +
Sbjct: 73 VHLMVNDPFHVAKACADAGADIITLQVEQTDCLAETISYLREHYPDLLIGLTLCPDTEID 132
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRN 182
+L + ++D+I I+T++P G + ++ I +I + ++G+ + VDG +
Sbjct: 133 LLTPYLAQVDLIQILTLDPRTGVKAETDAVIKRITRISNMLGEHRDQKLISVDGSMNLAL 192
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
L G D +V GS+ F+Q +
Sbjct: 193 ASQLFPLGIDWVVSGSALFSQADVDATLSEWK 224
>gi|194445790|ref|YP_002043342.1| epimerase [Salmonella enterica subsp. enterica serovar Newport str.
SL254]
gi|194404453|gb|ACF64675.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 254
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEVLNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + + K A
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 244
>gi|218259989|ref|ZP_03475474.1| hypothetical protein PRABACTJOHN_01135 [Parabacteroides johnsonii
DSM 18315]
gi|218224809|gb|EEC97459.1| hypothetical protein PRABACTJOHN_01135 [Parabacteroides johnsonii
DSM 18315]
Length = 149
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 60/110 (54%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I PS+LAADF L E+ I ++ A +H D+MDG FVPNISFG V+ +L+
Sbjct: 4 KIAPSLLAADFLNLQREVEMINESDADWLHLDIMDGVFVPNISFGFPVLEALKPICKKPM 63
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV 115
D HLMI I +A G ++ H E+ H+ R++ I G K G
Sbjct: 64 DVHLMIVEPQKFIPEVAATGAYMMNVHYEACTHLHRTVAAIKEAGMKGGC 113
>gi|313631710|gb|EFR98927.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
Length = 118
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR 159
R ++ I G K GV +NP TP ++L ++ ++D++L MTVNPGFGGQ I+ST+ +R
Sbjct: 1 HRVIQQIKQAGCKAGVVLNPGTPASVLNAILGDVDLVLQMTVNPGFGGQAFIDSTLENMR 60
Query: 160 QAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K S +EVDGGV + + QAG D+LV GS FF + +I+ K L
Sbjct: 61 YLDNWRRKNRGSYVIEVDGGVNAETAEKCKQAGVDVLVAGSYFFGAEDKIACVKGLKS 118
>gi|326625797|gb|EGE32142.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 231
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 3 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 60
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 61 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 121 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 180
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G + +V GS+ F + + + K A
Sbjct: 181 QDQLPSLIAQGINRVVSGSALFRDDRLVENTRSWRAMFKVA 221
>gi|171920957|ref|ZP_02932094.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
13 str. ATCC 33698]
gi|225550844|ref|ZP_03771793.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
gi|171903199|gb|EDT49488.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
13 str. ATCC 33698]
gi|225379998|gb|EEH02360.1| D-ribulose-5-phosphate 3 epimerase [Ureaplasma urealyticum serovar
2 str. ATCC 27814]
Length = 219
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
Q+VPS+LA D + E++ K + IH+DVMD +V N +F + + L + +
Sbjct: 4 QLVPSLLAFDKKQPYEQLKIFQKHHLQTIHYDVMDLAYVNNTAFETEHLEWLLKN-NFLV 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS--LRTIHAMGKKTGVAINPETPV 123
HLM+ + I I+FH E + + + I G+AI+P + +
Sbjct: 63 HIHLMVINPLQKIKQYFKYKPTHISFHFEMNDYQTNLLIIDEIKKHSIFAGIAIHPHSSL 122
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSR 181
+ E+D I M+V PG GGQ +E ++ K+++ K ++ +E+DGG+T
Sbjct: 123 NDYAFYLKEVDYITFMSVVPGKGGQLFLEESLLKLQELYDYKIKNNLTFKIEIDGGITLE 182
Query: 182 NIKSLVQAGADLLVVGSSF 200
IK + D + GS
Sbjct: 183 IIKKI-NIPIDFFISGSYL 200
>gi|160914622|ref|ZP_02076836.1| hypothetical protein EUBDOL_00629 [Eubacterium dolichum DSM 3991]
gi|158433162|gb|EDP11451.1| hypothetical protein EUBDOL_00629 [Eubacterium dolichum DSM 3991]
Length = 238
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 13/233 (5%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
I+I + ++ R+ + + ++AG IH D D + N+ G +I +R
Sbjct: 1 MKHIKIAAGLAHVNYGRIADVVKEASEAGVDYIHSDAADMHDLQNMKLMGGHQIIAGIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVA 116
+D +CH+ S+D I I AG D++ E + + K G+
Sbjct: 61 ETDKPIECHIYTVSMDEMFIEQIHQAGADMLIIPAEHFIGAQLAYIINWCRERKMKVGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTV----NPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
+ TP+ +E+ I +ID + I+T G +S I +++A+ +I +++
Sbjct: 121 LGCYTPLCFVEESIYDIDRLHIVTHGVDETDGKDNWGWRKSAIDLVKRARKMIDEKNPKC 180
Query: 173 E--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
E +DGG+ + N++ L++ D++V+ S+ F K Y + + + A
Sbjct: 181 ELAIDGGLRADNMEPLLECNPDVVVLSSAIF--KDPDGYTAGVQKCRAAIDAA 231
>gi|224585891|ref|YP_002639690.1| epimerase [Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|224470419|gb|ACN48249.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 254
Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 13/221 (5%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWTAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNP +G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPRYGSKMRSSDLHERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ SL+ G D +V GS+ F + + + K A
Sbjct: 204 QDQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 244
>gi|74005309|ref|XP_861232.1| PREDICTED: similar to ribulose-5-phosphate-3-epimerase isoform 3
[Canis familiaris]
Length = 119
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCRIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
D FD H+M+S + + +A AG + TFH E++ + ++ I G K
Sbjct: 61 LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKV 115
>gi|86146533|ref|ZP_01064855.1| Ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
gi|85835590|gb|EAQ53726.1| Ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
Length = 243
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
++I + D+ + + + ++ AGA IH D D + N+ G ++ +R
Sbjct: 1 MKKVKIAAGLAHVDYGHIADVVKEVSDAGADYIHCDAADMHDLKNLQLMGGHQIVEGIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVA 116
Y++ + H D I+ IA AG D++ E + ++ G K G+
Sbjct: 61 YTEKPIEVHAYFKDCDKLFIDKIAAAGADMLILPAEHFIGAPLCYIIKYCQNHGMKFGLT 120
Query: 117 INPETPVAILEDVIDEID--MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE- 173
+ TPV+ +++ I +D I+I + G +S I IR+A+ LI +R+ + E
Sbjct: 121 VGALTPVSFVKESIYYLDRLHIVIHGITDGDDEWLWRKSAIAMIREARELINERNPNCEL 180
Query: 174 -VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI-----SYAKRLNDLKKSALA 222
VDGG+ + NI+ L+ D++V ++ F K I + ++ L+ A A
Sbjct: 181 CVDGGIRNHNIEELLNEDIDVMVASTNIFGHKDGITAGVRDFRAAIDQLEDKAAA 235
>gi|218708235|ref|YP_002415856.1| putative pentose-5-phosphate-3-epimerase [Vibrio splendidus LGP32]
gi|218321254|emb|CAV17204.1| putative pentose-5-phosphate-3-epimerase [Vibrio splendidus LGP32]
Length = 243
Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
++I + D+ + + + ++ AGA IH D D + N+ G ++ +R
Sbjct: 1 MKKVKIAAGLAHVDYGHIADVVKEVSDAGADYIHCDAADMHDLKNLQLMGGHQIVEGIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVA 116
Y++ + H D I+ IA AG D++ E + ++ G K G+
Sbjct: 61 YTEKPIEVHAYFKDCDKLFIDKIAAAGADMLILPAEHFIGAPLCYIIKYCQNHGMKFGLT 120
Query: 117 INPETPVAILEDVIDEID--MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE- 173
+ TPV+ +++ I +D I+I + G +S I IR+A+ LI +R+ + E
Sbjct: 121 VGALTPVSFVKESIYYLDRLHIVIHGITDGDDEWLWRKSAIAMIREARELINERNPNCEL 180
Query: 174 -VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI-----SYAKRLNDLKKSALA 222
VDGG+ + NI+ L+ D++V ++ F K I + ++ L+ A A
Sbjct: 181 CVDGGIRNHNIEELLNEDIDVMVASTNIFGHKDGITAGVRDFRAAIDQLEDKAAA 235
>gi|323454712|gb|EGB10581.1| hypothetical protein AURANDRAFT_61957 [Aureococcus anophagefferens]
Length = 1052
Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDG---CFVPNISFGADVIRSLRS--YS 61
+ PS+LAAD + L + AGA +H DV DG C + G + +LR+
Sbjct: 823 VAPSLLAADPANLADAARAALSAGATWLHVDVFDGSKACGGALSNMGPGTVSALRAALGP 882
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
D+ D H + H+++ A +TF E+ + + I A+G + GV + P T
Sbjct: 883 DAFLDVHAGV----RHLDVEAYRDASQLTFQFEAVDEPVAACKQIRALGLRAGVCVAPAT 938
Query: 122 PVAILEDVID--EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P L+ ++D +D++ ++ V PG GGQ E + K+R +A + L DGG+
Sbjct: 939 PADALDPLLDAGLVDLVDVLFVEPGRGGQDFNEDCLEKLRHVRAR--APGVDLMADGGIH 996
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGE 206
AGA++LV G+ F +G
Sbjct: 997 ETTAYLAAAAGANVLVAGTFCFRDRGR 1023
>gi|148826586|ref|YP_001291339.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittEE]
gi|229845817|ref|ZP_04465929.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 7P49H1]
gi|148716746|gb|ABQ98956.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae PittEE]
gi|229810821|gb|EEP46538.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae 7P49H1]
Length = 230
Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 53/215 (24%), Positives = 105/215 (48%), Gaps = 8/215 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I ILA+++ + + ++ +++ + +HFD+ DG F P + G+ I+ + + D
Sbjct: 17 ISVGILASNWLKFSKTLNVLSQNQLRLLHFDIADGQFSPFFTVGSMAIQQFPN--TFIKD 74
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM-GKKTGVAINPETPVAI 125
HLM+ + + AG DI+T E++ + +L+ + G+AI P TP+ +
Sbjct: 75 VHLMVKDQFNVVKKCVAAGADIMTLQVENTVDLDNTLQWLKTQKTILCGLAICPNTPLEL 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L + +ID+I I+T++P G + ++ ++ Q + + +DG +T
Sbjct: 135 LYPYLPDIDLIQILTLDPRTGEKANLDQITERLIQLLNQLHDSGQEKLISIDGSMTFELA 194
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + D +V GS+ F+ S+ K L + KK
Sbjct: 195 SHLKKYEIDWVVSGSALFSSD---SFEKTLIEWKK 226
>gi|255657051|ref|ZP_05402460.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-23m63]
gi|296452118|ref|ZP_06893829.1| probable pentose-5-phosphate 3-epimerase [Clostridium difficile
NAP08]
gi|296877474|ref|ZP_06901507.1| probable pentose-5-phosphate 3-epimerase [Clostridium difficile
NAP07]
gi|296259068|gb|EFH05952.1| probable pentose-5-phosphate 3-epimerase [Clostridium difficile
NAP08]
gi|296431486|gb|EFH17300.1| probable pentose-5-phosphate 3-epimerase [Clostridium difficile
NAP07]
Length = 238
Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
I+I + ++ + + AG +H D D + N+ G +I ++R
Sbjct: 1 MKHIKIAAGLAHVNYGHISAVVKEAMDAGVDYVHSDAADMHDLKNMQLMGGHQIIEAIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVA 116
+D +CH+ D I IA AGC+++ E + + G K G+
Sbjct: 61 VTDKPIECHIYTRDCDRLFIEKIAAAGCNLLIIPAEHFLGAPLAYIINYCREFGMKVGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTV----NPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
+ TP+ +++ I +ID + I+ G +S + +++A+ +I +++
Sbjct: 121 VGCYTPLCFVDEAIYDIDRLQIVVHGVDETDGKDNWGWRKSAVDLVKRARKMIDEKNPKC 180
Query: 173 E--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
E +DGG+ + N++ L++ D++++ S+ F K I+ +K AID
Sbjct: 181 ELAIDGGLRADNMEPLIECNPDVVILSSAIFKDKDGIAAG-----VKNCRKAID 229
>gi|126700726|ref|YP_001089623.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
630]
gi|254976662|ref|ZP_05273134.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-66c26]
gi|255094045|ref|ZP_05323523.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile CIP
107932]
gi|255102233|ref|ZP_05331210.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-63q42]
gi|255308095|ref|ZP_05352266.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
ATCC 43255]
gi|255315798|ref|ZP_05357381.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-76w55]
gi|255518458|ref|ZP_05386134.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-97b34]
gi|255651577|ref|ZP_05398479.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-37x79]
gi|260684631|ref|YP_003215916.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
CD196]
gi|260688289|ref|YP_003219423.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
R20291]
gi|306521391|ref|ZP_07407738.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
QCD-32g58]
gi|115252163|emb|CAJ70001.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile]
gi|260210794|emb|CBA65780.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
CD196]
gi|260214306|emb|CBE06643.1| putative pentose-5-phosphate 3-epimerase [Clostridium difficile
R20291]
Length = 238
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 16/234 (6%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
I+I + ++ + + AG +H D D + N+ G +I ++R
Sbjct: 1 MKHIKIAAGLAHVNYGHISAVVKEAMDAGVDYVHSDAADMHDLKNMQLMGGHQIIEAIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVA 116
+D +CH+ D I IA AGC+++ E + + G K G+
Sbjct: 61 VTDKPIECHIYTRDCDRLFIEKIAAAGCNLLIIPAEHFLGAPLAYIINYCREFGMKVGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTV----NPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
I TP+ +++ I +ID + I+ G +S + +++A+ +I +++
Sbjct: 121 IGCYTPLCFVDEAIYDIDRLQIVVHGVDETDGKDNWGWRKSAVDLVKRARKMIDEKNPKC 180
Query: 173 E--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
E +DGG+ + N++ L++ D++++ S+ F K I+ +K AID
Sbjct: 181 ELAIDGGLRADNMEPLIECNPDVVILSSAIFKDKDGITAG-----VKNCRKAID 229
>gi|260581585|ref|ZP_05849382.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae NT127]
gi|260095178|gb|EEW79069.1| ribulose-phosphate 3-epimerase [Haemophilus influenzae NT127]
Length = 230
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 8/215 (3%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I ILA+D+ + + ++ ++++ +HFD+ DG F P + G+ I+ + + D
Sbjct: 17 ISVGILASDWLKFSKTLNVLSQSQLHLLHFDIADGQFSPFFTVGSMAIQQFPN--TFIKD 74
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM-GKKTGVAINPETPVAI 125
HLM+ + AG DI+T E++ + +L+ + G+AI P TP+ +
Sbjct: 75 VHLMVKDQFNVAKKCVAAGADIMTLQVENTVDLDNTLQWLKTQKTILCGLAICPNTPLEL 134
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNI 183
L + +ID+I I+T++P G + ++ ++ Q + + +DG +T
Sbjct: 135 LYPYLPDIDLIQILTLDPRTGEKANLDQITERLIQLLNQLHDSGQEKLISIDGSMTFELA 194
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + D +V GS+ F+ S+ K L + KK
Sbjct: 195 SHLKKYEIDWVVSGSALFSSD---SFEKTLIEWKK 226
>gi|312601114|gb|ADQ90369.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 168]
Length = 179
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVF-DCHLMISSIDSHINIIADAGCDIITFHPESSP 97
MDG FV N++ I+++ S D HLM + + I + + T H ES
Sbjct: 1 MDGIFVKNVAISIPEIKNIIKKSKEFISDVHLMSVNPEEQIKQLL-GYVNFATIHFESRN 59
Query: 98 HIR-RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
+ + + + + ++ K G+AI PET + + D++ EI ++LIM+V PG GGQ IE+T
Sbjct: 60 YAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYK 119
Query: 157 KIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
KI + +I + + ++VDGG+ N K + +GAD++VVG+ + ++ K +N
Sbjct: 120 KIEELSKIIQENNYKIIIQVDGGIKDFNSKRVFDSGADVIVVGTFLAEKPTKLKIKKLIN 179
>gi|323720072|gb|EGB29178.1| ribulose-phosphate 3-epimerase rpe [Mycobacterium tuberculosis
CDC1551A]
Length = 186
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I PSILAADF+RL +E + + GA +H DVMDG FVPN++ G V+ SL + +D D
Sbjct: 10 IAPSILAADFARLADEAAAV--NGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMD 67
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
CHLMI + D A+AG +TFH E++ + R I A
Sbjct: 68 CHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRA 109
>gi|289809745|ref|ZP_06540374.1| epimerase [Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 225
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 17 SRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDS 76
R + + +H D+MDG F P + G + L + D HLM++ +
Sbjct: 3 CRCHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLMVADQWA 60
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIH---------AMGKKTGVAINPETPVAILE 127
AG IT E H+ +L + M G+++ P TP+ ++
Sbjct: 61 AAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPATPLDVII 120
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKS 185
++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T + S
Sbjct: 121 PILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDGSLTQDQLPS 180
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L+ G D +V GS+ F + + + K A
Sbjct: 181 LIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 215
>gi|260577001|ref|ZP_05844981.1| Ribulose-phosphate 3-epimerase [Rhodobacter sp. SW2]
gi|259020757|gb|EEW24073.1| Ribulose-phosphate 3-epimerase [Rhodobacter sp. SW2]
Length = 242
Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 32/248 (12%)
Query: 1 MTPSIQ--------IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGAD 52
M P +Q I + AA RL + G +HFDVMDG FVP I+ G
Sbjct: 1 MAPDLQPLRKRCSGISAGLFAASSGRLEAAADQLRHWGGGIVHFDVMDGEFVPQITGGPA 60
Query: 53 VIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI----------RRS 102
+ S++ + D HLM++ + I A AG DI+T H E++ R
Sbjct: 61 FLAV--SHNSLLRDVHLMVALPERQIEAFARAGADILTVHAEAAGAAAALAAIRAVSERL 118
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
R I G+A+ P T + LE ++ + D+IL+++++P + + ++
Sbjct: 119 GRAI-----LAGLAVMPGTALEQLEPLLALQPDLILVLSLDPRNSLPADLPAACARLAAL 173
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL----- 216
+A ++ +DGG+T + G D++V GS+ F + RL D
Sbjct: 174 RAGAAAGTV-FAIDGGITEATVAQAAACGPDVIVSGSAIFGAADPAAAFGRLTDAWAEGR 232
Query: 217 KKSALAID 224
+K A A D
Sbjct: 233 RKLAEAAD 240
>gi|170782612|ref|YP_001710946.1| putative sugar-phosphate epimerase [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157182|emb|CAQ02363.1| putative sugar-phosphate epimerase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 230
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S++ + + L E++ I G ++H D++D F N+ + IR L D H+
Sbjct: 11 SVVCINQTHLWRELTAIRSLGVSRLHIDIIDPSFG-NLGMAPESIRDLSDDLRMPVDVHV 69
Query: 70 MISSIDSHINIIADAGCDIITFHPES-SPHIRRSLRTIHAMGKKTGVAINP-ETPVAILE 127
M++ + + D G I H +P LR G + G+ ++ E+P L
Sbjct: 70 MVAEPSLLVPKLVDRGAQAILVHQRHVTPEALEVLRAATVGGTEVGLVLDASESPRDWLI 129
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS-LEVDGGVTSRNIKSL 186
D++ +++M V PG G+ + +R A GK S+ +EVDG V+S I L
Sbjct: 130 DIV-RPQRLVVMAVTPGGAGRPFRREALDTVRMAAEFRGKSSVESVEVDGAVSSITIGKL 188
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V AGAD V+GSS F ++ A R L ++A A D
Sbjct: 189 VDAGADSFVLGSSVF--PDRVARADRFLPLLEAAGAAD 224
>gi|313616821|gb|EFR89524.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL S4-378]
Length = 119
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
++ I A G K GV +NP TP +L+ ++ ++D++L MTVNPGFGGQ I+STI +R
Sbjct: 5 IQQIKAAGCKAGVVLNPGTPANVLDAILGDVDLVLQMTVNPGFGGQSFIDSTIENMRYLD 64
Query: 163 ALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + +EVDGGV + + QAG D+LV GS FF +++ + L
Sbjct: 65 NWRRENNGSYVIEVDGGVNAETAEKCKQAGVDILVAGSYFFGADDKVACVQGLKK 119
>gi|320526900|ref|ZP_08028090.1| putative ribulose-phosphate 3-epimerase [Solobacterium moorei
F0204]
gi|320132868|gb|EFW25408.1| putative ribulose-phosphate 3-epimerase [Solobacterium moorei
F0204]
Length = 238
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 11/220 (5%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLRS 59
I+I + ++ +L + + AG IH D D + N+ G +I+++R
Sbjct: 1 MKHIKIAAGLAHINYGKLTQLVKEAEAAGVDYIHSDAADMHDLQNMKLMGGWQIIQAIRP 60
Query: 60 YSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVA 116
+CH+ S+D I I AG +++ E + + K G+
Sbjct: 61 EVKIPVECHIYTVSMDKMFIEQIHSAGANMLIIPAEHFIGAQLTYIINWCRERKIKVGLT 120
Query: 117 INPETPVAILEDVIDEIDMILIMTV----NPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
I TP+ +E+ I +ID + I+T G S +R+A+ LI +++
Sbjct: 121 IGCYTPLCFVEESIYDIDRLQIVTHGVDETDGADNWGWRRSVTDLVRRARKLIDEKNPKC 180
Query: 173 E--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
E +DGG+ N++ L++ D++V+ S+ F I+ A
Sbjct: 181 ELALDGGLRVDNMEPLIECNPDVIVMSSALFKDPDGITAA 220
>gi|46143477|ref|ZP_00135151.2| COG0036: Pentose-5-phosphate-3-epimerase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 114
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 49/109 (44%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 1 MTP-SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M I PSIL+AD +RLGE+++ + KAG IHFDVMD FVPN++FG + ++LR
Sbjct: 1 MARQPFLIAPSILSADLARLGEDVAEVLKAGGDIIHFDVMDNHFVPNLTFGPAICKALRD 60
Query: 60 YS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
Y + D HLM+ ++ I A AG + ITFHPE++ HI R+L+
Sbjct: 61 YGITAEIDVHLMVKPVERLIPDFAKAGANYITFHPEATDHIDRTLQMYR 109
>gi|225352138|ref|ZP_03743161.1| hypothetical protein BIFPSEUDO_03753 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157385|gb|EEG70724.1| hypothetical protein BIFPSEUDO_03753 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 117
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
MG K A+ P PV + D++DE DMILIMTV PGFGGQ+ +++ + K+R+ + I +R
Sbjct: 1 MGCKACFAVRPAEPVEPIFDILDEFDMILIMTVEPGFGGQKFLDNQMAKVRRLRDEITRR 60
Query: 169 SI--SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ ++VDGGV+ + + +AGAD+LV GS+ + + + + ++A
Sbjct: 61 GLATKIQVDGGVSPKTAHIVAEAGADVLVAGSAVYGAEDPAEAIDSIREKAEAA 114
>gi|294660573|ref|NP_853417.2| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum str.
R(low)]
gi|284812236|gb|AAP56985.2| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum str.
R(low)]
gi|284930914|gb|ADC30853.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum str.
R(high)]
Length = 215
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 10 SILAA----DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
SIL D ++L + G +IH+DVMD FV N +F + +L++
Sbjct: 7 SILPMLNDYDQNKLASY----KQLGLNKIHYDVMD-EFVNNKAFDERYVDNLKNLGYQ-I 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPH----IRRSLRTIHAMGKKTGVAINPET 121
+ HLM++ + +HI + A CD I+FH E + I + L I KK G+A T
Sbjct: 61 NVHLMVNKVANHILVYAKTRCDQISFHVEPLANNKQLINKYLAYIKTNNKKAGLAFKFNT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V D I +D + +M+V PG GGQ I + K + +E+DGG+
Sbjct: 121 DVNDYLDQIKLVDYVTLMSVEPGAGGQAFNPLVYRNIAKLIKFNPK--LEIEIDGGINLE 178
Query: 182 NIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDLK 217
L G V GS F+ + S + L ++
Sbjct: 179 KAIELK--GLVSGFVSGSYFYQLSDQ-SKLEMLEKIR 212
>gi|240273443|gb|EER36963.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus H143]
gi|325087342|gb|EGC40652.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus H88]
Length = 147
Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 8/121 (6%)
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDE------IDMILIMTVNPGFGGQQLIEST 154
+R IH G + G+AI P+TPV +L D++++ DM+L+MTV+PGFGGQ+ + S
Sbjct: 22 ELIRYIHENGMQAGIAIKPDTPVDVLWDILEQDDPLDRPDMVLVMTVHPGFGGQKFMASE 81
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+PK+ + + +++EVDGG+ ++ AGA+++V GS+ F + L
Sbjct: 82 LPKVNALR--VKYPHLNIEVDGGLGEDTVEQAADAGANVIVAGSAVFGAQDPAQAIAMLR 139
Query: 215 D 215
+
Sbjct: 140 E 140
>gi|284931670|gb|ADC31608.1| ribulose-phosphate 3-epimerase [Mycoplasma gallisepticum str. F]
Length = 215
Score = 134 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 10 SILAA----DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
SIL D ++L + G +IH+DVMD FV N +F + +L+
Sbjct: 7 SILPMLNDYDQNKLASY----KQLGLNKIHYDVMD-EFVNNKAFDERYVDNLKDLGYQ-I 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPH----IRRSLRTIHAMGKKTGVAINPET 121
+ HLM++ + +HI + A CD I+FH E + I + L I KK G+A T
Sbjct: 61 NVHLMVNKVANHILVYAKTRCDQISFHVEPLANNKQLINKYLAYIKTNNKKAGLAFKFNT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V D I +D + +M+V PG GGQ I + K + +E+DGG+
Sbjct: 121 DVNDYLDQIKLVDYVTLMSVEPGAGGQAFNPLVYRNIAKLIKFNPK--LEIEIDGGINLE 178
Query: 182 NIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDLK 217
L G V GS F+ + S + L ++
Sbjct: 179 KAIELK--GLVSGFVSGSYFYQLSDQ-SKLEMLEKIR 212
>gi|283769130|ref|ZP_06342034.1| ribulose-phosphate 3 epimerase family protein [Bulleidia extructa
W1219]
gi|283104106|gb|EFC05485.1| ribulose-phosphate 3 epimerase family protein [Bulleidia extructa
W1219]
Length = 239
Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 11/221 (4%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISF--GADVIRSLR 58
M I+I + ++ +L + + AG IH D D + N+ G +I+++R
Sbjct: 1 MMKHIKIAAGLAHINYGKLTQLVREAEAAGVDYIHSDAADMHDLQNMKLMGGWQIIQAIR 60
Query: 59 SYSDSVFDCHLMISSIDS-HINIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGV 115
+CH+ S+D I I AG +++ E + + K G+
Sbjct: 61 PEVKIPVECHIYTVSMDKMFIEQIHAAGANMLIVPAEHFIGAQLTYIINWCRERNIKVGL 120
Query: 116 AINPETPVAILEDVIDEIDMILIMTV----NPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
I TP+ +E+ I +ID + I+T G S + +A+ LI +++
Sbjct: 121 TIGCYTPLCFVEESIYDIDRLQIVTHGVDETDGADNWGWRRSVTDLVVRARKLIDEKNPK 180
Query: 172 LE--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
E +DGG+ + N++ L+ D++++ S+ F I+ A
Sbjct: 181 CELALDGGLRADNMEPLIACNPDVIIMSSAIFKDPEGITAA 221
>gi|313610542|gb|EFR85670.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL F2-208]
Length = 111
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 4/114 (3%)
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
G + GV +NP TP + LE V+D+ID IL+MTVNPG GGQ+ +S++ KIR+ KA IG R
Sbjct: 1 YGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNR 60
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
I +EVDGGV + K AGADL+VVGS F E L L K L
Sbjct: 61 PIQIEVDGGVNAELAKECTLAGADLIVVGSYLF----EGDIEANLEKLSKGVLT 110
>gi|213648806|ref|ZP_03378859.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 149
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 75/147 (51%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ YS
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQYSRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLL 120
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLI 151
+ ++D ++IMT P GQQ I
Sbjct: 121 PYRYLALQLDALMIMTSEPDGRGQQFI 147
>gi|7109695|gb|AAF36766.1| ribulose-phosphate 3-isomerase [Mycoplasma gallisepticum]
gi|28212483|gb|AAO37622.1| ribulose-phosphate 3-isomerase [Mycoplasma gallisepticum]
Length = 215
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 10 SILAA----DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
SIL D ++L + G +IH+DVMD FV N +F + +L+
Sbjct: 7 SILPMLNDYDQNKLASY----KQLGLNKIHYDVMD-EFVNNKAFDERYVDNLKDLGYQ-I 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPH----IRRSLRTIHAMGKKTGVAINPET 121
+ HLM++ + +HI + A C+ I+FH E + I + L I KK G+A T
Sbjct: 61 NVHLMVNKVANHILVYAKTRCNQISFHVEPLANNKQLINKYLAYIKTNNKKAGLAFKFNT 120
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
V D I +D + +M+V PG GGQ I + K + +E+DGG+
Sbjct: 121 DVNDYLDQIKLVDYVTLMSVEPGAGGQAFNPLVYRNIAKLIKFNPK--LEIEIDGGINFE 178
Query: 182 NIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDLK 217
L G V GS F+ + S + L ++
Sbjct: 179 KAIELK--GLVSGFVSGSYFYQLSDQ-SKLEMLEKIR 212
>gi|113460206|ref|YP_718263.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 129PT]
gi|112822249|gb|ABI24338.1| ribulose-5-phosphate 3-epimerase [Haemophilus somnus 129PT]
Length = 236
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ IL+A++ +L EE++ + + +HFD+ DG F + GA I+ +
Sbjct: 14 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFP--THCFK 71
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVA 116
D HLM+ + + G +++T E ++ + G
Sbjct: 72 DVHLMVRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGAC 131
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+ PETP++ LE +D+ID+I ++T++P G + E + ++ Q + +G R + + +
Sbjct: 132 LCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI 191
Query: 175 DGGVTSRNIKSLVQAG---ADLLVVGSSFFNQK 204
DG +T + + G D LV GS+ F+ +
Sbjct: 192 DGSMTLE-LAKYFKQGTHQIDWLVSGSALFSGE 223
>gi|291532578|emb|CBL05691.1| Pentose-5-phosphate-3-epimerase [Megamonas hypermegale ART12/1]
Length = 114
Score = 132 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 111 KKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS- 169
K +A+ P TP++ ++D++ E+DM+L+MTV PGFGGQ+ +E + K+++ L + +
Sbjct: 1 MKAAIAVKPATPISEIKDLLGELDMVLVMTVEPGFGGQKFMEDQMEKVKELVKLREENNY 60
Query: 170 -ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+EVDGGV IK+ +GA+++V GS+ K + + + K
Sbjct: 61 KYDIEVDGGVNPETIKTCFASGANVIVAGSAVLGAKDISARVEEFAQIAK 110
>gi|223936704|ref|ZP_03628614.1| Ribulose-phosphate 3-epimerase [bacterium Ellin514]
gi|223894555|gb|EEF61006.1| Ribulose-phosphate 3-epimerase [bacterium Ellin514]
Length = 122
Score = 132 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 57/91 (62%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+ I PS+LAADF+R G E + K+GA +H D+MDG FVPNISFG V+R++R +S
Sbjct: 8 PMIIAPSLLAADFARFGSETVRVDKSGADWLHLDIMDGHFVPNISFGPQVVRTVRPFSKL 67
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPE 94
FD HLM S + + A AG D I H E
Sbjct: 68 FFDVHLMCSKPEILLEPFAKAGADQINVHVE 98
>gi|255017919|ref|ZP_05290045.1| hypothetical protein LmonF_09655 [Listeria monocytogenes FSL
F2-515]
Length = 134
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
++ + AD G DII HPE+ H R+L I GKK G+AINP T +A +++++ +D
Sbjct: 1 DYVEMFADKGADIIYIHPEADLHPARTLDKIRNKGKKVGIAINPGTAIATIKELLPLVDN 60
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+++MTVNPGF GQ+ ++ KI + L + + VDG ++ I L Q G V
Sbjct: 61 VMVMTVNPGFAGQKYLDYVDVKIAELVELKKDYTFEIMVDGAISPEKISKLSQLGVKGFV 120
Query: 196 VG-SSFFNQK 204
+G S+ +K
Sbjct: 121 LGTSALLRKK 130
>gi|170718244|ref|YP_001785264.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
gi|168826373|gb|ACA31744.1| ribulose-phosphate 3-epimerase [Haemophilus somnus 2336]
Length = 236
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ IL+A++ +L EE++ + + +HFD+ DG F + GA I+ +
Sbjct: 14 KLSVGILSANWLQLNEEVTTLLEKQINVLHFDIADGQFSSLFTVGAIGIKYFP--THCFK 71
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVA 116
D HLM+ + + G +++T E ++ + G
Sbjct: 72 DVHLMVRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGAC 131
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+ PETP++ LE +D+ID+I ++T++P G + E + ++ Q + +G R + + +
Sbjct: 132 LCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI 191
Query: 175 DGGVTSRNIKSLVQAG---ADLLVVGSSFFNQK 204
DG +T + + G D +V GS+ F+ +
Sbjct: 192 DGSMTLE-LAKYFKQGTHQIDWIVSGSALFSGE 223
>gi|207093432|ref|ZP_03241219.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPKX_438_AG0C1]
Length = 111
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+++ PS+L+ADF L EEI ++ + A +H DVMDG +VPN++ G V+ ++ S
Sbjct: 1 MKVAPSLLSADFMHLAEEIESV--SNADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVP 58
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
D HLM+ + + + A II+ H E+ H R L+ I G G+ +
Sbjct: 59 LDVHLMVENASFFVGLFAPLKPQIISIHAENEKHPHRVLQLIKNSGITPGIVL 111
>gi|329571356|gb|EGG53043.1| putative ribulose-phosphate 3-epimerase [Enterococcus faecalis
TX1467]
Length = 137
Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I+ LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIKELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETP 122
HLM+++ + + D C+ I H E + R + IH K G+ +NPETP
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKCEWICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETP 121
Query: 123 VAILEDVID 131
+ + I+
Sbjct: 122 IESIFPYIE 130
>gi|225387364|ref|ZP_03757128.1| hypothetical protein CLOSTASPAR_01117 [Clostridium asparagiforme
DSM 15981]
gi|225046496|gb|EEG56742.1| hypothetical protein CLOSTASPAR_01117 [Clostridium asparagiforme
DSM 15981]
Length = 144
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDS 63
+ S++ F + E++ + GAK H D+MDG +VPN+ +IR L+ Y
Sbjct: 1 MINSASVINVPFLEMREQLDELAAGGAKFFHIDLMDGHYVPNLCMPIKLIRELKDAYPQI 60
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
V D H+M+++ +I + +AG D + FH +S+P +RR + IH G K G+ INP +
Sbjct: 61 VMDVHIMVTNPQDYIERLREAGADYVAFHTDSTPFVRRIINEIHGAGMKAGIVINPSQRI 120
Query: 124 AILEDVIDEIDMILIMTVNPGFGG 147
+E I+ +DM+++M V PGF G
Sbjct: 121 DHIEPYIEYVDMVMLMAVEPGFAG 144
>gi|186973115|pdb|3CU2|A Chain A, Crystal Structure Of Ribulose-5-Phosphate 3-Epimerase
(Yp_718263.1) From Haemophilus Somnus 129pt At 1.91 A
Resolution
gi|186973116|pdb|3CU2|B Chain B, Crystal Structure Of Ribulose-5-Phosphate 3-Epimerase
(Yp_718263.1) From Haemophilus Somnus 129pt At 1.91 A
Resolution
Length = 237
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
++ IL+A++ +L EE++ + + +HFD+ DG F + GA I+ +
Sbjct: 15 KLSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFP--THCFK 72
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVA 116
D HL + + + G +++T E ++ + G
Sbjct: 73 DVHLXVRNQLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGAC 132
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEV 174
+ PETP++ LE +D+ID+I ++T++P G + E + ++ Q + +G R + + +
Sbjct: 133 LCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI 192
Query: 175 DGGVTSRNIKSLVQAG---ADLLVVGSSFFNQK 204
DG T + + G D LV GS+ F+ +
Sbjct: 193 DGSXTLE-LAKYFKQGTHQIDWLVSGSALFSGE 224
>gi|71425611|ref|XP_813140.1| ribulose-phosphate 3-epimerase [Trypanosoma cruzi strain CL Brener]
gi|70877996|gb|EAN91289.1| ribulose-phosphate 3-epimerase, putative [Trypanosoma cruzi]
Length = 146
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 80 IIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID--EIDMIL 137
ADAG TFH E++ I G + GVAI+P T + L +I+ +DM+L
Sbjct: 1 PFADAGASQFTFHIEATQEPVALASKILEAGMQVGVAISPRTAIDGLIPLIENGHLDMVL 60
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+MTV PGF GQ+ + + K+RQ + ++++VDG + + AGA+ LV G
Sbjct: 61 VMTVEPGFAGQKFLSEPLAKVRQLRGRY--PHLNIQVDGSINLVTVDEAALAGANCLVPG 118
Query: 198 SSFFNQKGEISYAKRLN 214
+ F K L
Sbjct: 119 QAVFKAKNRQENVIHLR 135
>gi|86740502|ref|YP_480902.1| ribulose-5-phosphate 3-epimerase [Frankia sp. CcI3]
gi|86567364|gb|ABD11173.1| ribulose-5-phosphate 3-epimerase [Frankia sp. CcI3]
Length = 259
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
S+ +AD + LG E+ T A +HFD+ DG F P++ F ++ +LR + F HL
Sbjct: 29 SLWSADLAALGVELDR-TSGVADVVHFDIADGSFGPDLMFSPAMLAALRPRTTVPFHAHL 87
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
+ + I+ + AG D+IT E + R+L I G G+A+ +T V
Sbjct: 88 LARRPIALIDAVTTAGADLITVPAE-IDDVARALHRIRDNGNAAGLALGVDTRVVDARPY 146
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG----KRSISLEVDGGVTSRNIKS 185
+ ID+++++ G L + + ++ A+ L+ + ++ L +GGV +R +
Sbjct: 147 LGAIDVLVVVCTPGGARDAALTLAALRRLHAARRLVEATGHQHTVRLLAEGGVGARTVGP 206
Query: 186 LVQAGADLLV----------VGSS 199
L AG D L+ G++
Sbjct: 207 LSVAGVDGLITDLPVLGDDPAGTA 230
>gi|110589048|gb|ABG77033.1| pentose-5-phosphate-3-epimerase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 123
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL-- 172
+ NP TP++ L+ V+D++DMIL+M+VNPGFGGQ I +T+ K+R + LI + +
Sbjct: 10 LLFNPVTPLSHLDYVLDKVDMILLMSVNPGFGGQSFIPATLDKLRACRKLIDDSGLDIRL 69
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
E+DGGV NI + AGAD V GS F E +
Sbjct: 70 EIDGGVKVDNIAEIKAAGADTFVAGSGIFGFPEEGDANR 108
>gi|169334965|ref|ZP_02862158.1| hypothetical protein ANASTE_01371 [Anaerofustis stercorihominis DSM
17244]
gi|169257703|gb|EDS71669.1| hypothetical protein ANASTE_01371 [Anaerofustis stercorihominis DSM
17244]
Length = 205
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 6/201 (2%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ I PSI + D L +E + K IH D+ DG + I+FG + + S + S
Sbjct: 1 MIISPSIASGDALNLQKETEFVDKH-FSNIHMDIQDGVYAK-ITFGMKTLEQVCSITTSK 58
Query: 65 FDCHLMISSIDSHINIIADAGC-DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
HL + ++ I+ DI+ H +R + G KTG+ ++
Sbjct: 59 VSVHLQVMDPLKYLKPISKMDNIDIVHIHINHLKDPKRVISAYKKAGIKTGIGLSNYDLD 118
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ + +D +L++T G L E +I K +I S+ + VDGG+ +
Sbjct: 119 SNTNKYFELVDSVLVLT---ACYGDPLQEYSIKMENYVKDIIDNTSLEMWVDGGIDLDRL 175
Query: 184 KSLVQAGADLLVVGSSFFNQK 204
L + G D +V+G + F K
Sbjct: 176 THLKEIGVDAVVLGRAVFGDK 196
>gi|255975893|ref|ZP_05426479.1| LOW QUALITY PROTEIN: ribulose-phosphate 3-epimerase [Enterococcus
faecalis T2]
gi|255968765|gb|EET99387.1| LOW QUALITY PROTEIN: ribulose-phosphate 3-epimerase [Enterococcus
faecalis T2]
Length = 144
Score = 124 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 88 IITFHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
I H E + R + IH K G+ +NPETP+ + I+ +D I IMTV+PGF
Sbjct: 1 WICMHAEVLDGLAFRLIDQIHNANLKAGIVLNPETPIESIFPYIELLDKITIMTVDPGFA 60
Query: 147 GQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQ 203
GQ+ IE T+ KI + L ++ +E+DG + K + AG D+ +VG S F
Sbjct: 61 GQRFIEGTLDKIVALRNLREEKGYRYVIEMDGSSNRNSFKRIDAAGPDIYIVGRSGLFGL 120
Query: 204 KGEISYAKRL 213
+I A R+
Sbjct: 121 DEDIEKAWRM 130
>gi|289608206|emb|CBI60633.1| unnamed protein product [Sordaria macrospora]
Length = 127
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 18/143 (12%)
Query: 39 MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPH 98
MDG PN++ G V+++LR +S FD HLM+S +D + A+AG
Sbjct: 1 MDGISSPNLTIGPAVVKALRPHSAKPFDVHLMVSPVDPLVEAFAEAGR------------ 48
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
I +GK+ GV +NP TPV +++ V+D D++L+M+VNPGFGGQ+ I+S + KI
Sbjct: 49 ----YPRIKTLGKRAGVVLNPGTPVEVVDHVLDLTDLLLVMSVNPGFGGQKFIDSQLRKI 104
Query: 159 RQAKALIGK--RSISLEVDGGVT 179
Q +A I R+I L+VDGG+
Sbjct: 105 EQLRARIDATGRAIDLQVDGGID 127
>gi|213865176|ref|ZP_03387295.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 218
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 13/193 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDGSLT 203
Query: 180 SRNIKSLVQAGAD 192
+ SL+ G D
Sbjct: 204 QDQLPSLIAQGID 216
>gi|213621198|ref|ZP_03373981.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 101
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRN 182
L+ V+D++D+IL+M+VNPGFGGQ I T+ K+R+ + I + EVDGGV N
Sbjct: 1 YLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDASGYDIRLEVDGGVKVNN 60
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + AGAD+ V GS+ F + Y K +++++
Sbjct: 61 IGEIAAAGADMFVAGSAIF---DKPDYKKVIDEMR 92
>gi|225352139|ref|ZP_03743162.1| hypothetical protein BIFPSEUDO_03754 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157386|gb|EEG70725.1| hypothetical protein BIFPSEUDO_03754 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 147
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
+IQI PSIL+ADF L ++ I + A +H DVMD FVPN++ G ++ + +D
Sbjct: 2 TIQIAPSILSADFCNLERDLKAI--SNADLVHVDVMDHHFVPNLTLGEPIVARICEVTDL 59
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHP 93
D HLMI D A G ++FH
Sbjct: 60 PVDVHLMIEDPDRWAPEYAKLGAASVSFHM 89
>gi|1490364|emb|CAB01563.1| unknown [Mus musculus]
Length = 145
Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDV-------MDGCFVPNISFGADV 53
M +I PSIL +D + LG E + +GA +H D + VPNI+ G V
Sbjct: 5 MASGRKIGPSILNSDLANLGAECLRMLDSGADYLHLDAPCSSGRSVFWHLVPNITLGHPV 64
Query: 54 IRSLRSYS--DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS-LRTIHAMG 110
+ SLR D FD H+M+S + + + AG + TFH E++ + L+TI G
Sbjct: 65 VESLRKQIGQDPFFDMHIMVSRPEQWVKPMDVAGANQYTFHLEATENPGALDLKTIRENG 124
Query: 111 KKTGVAINPETP 122
K G+ I P
Sbjct: 125 MKVGLDIKPRNY 136
>gi|13507990|ref|NP_109939.1| ribulose-phosphate 3-epimerase [Mycoplasma pneumoniae M129]
gi|2499727|sp|P75522|RPE_MYCPN RecName: Full=Probable ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|1674282|gb|AAB96229.1| D-ribulose-5-phosphate 3 epimerase [Mycoplasma pneumoniae M129]
Length = 215
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINII- 81
+ G + IH+DVMD FV N F + + L+ V + HLM+ +++ + +
Sbjct: 26 LEQFFADGLRLIHYDVMD-HFVDNTVFQGEHLDELQQIGFQV-NVHLMVQALEQILPVYL 83
Query: 82 ADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM 139
I+FH E P I+ + I GK+ G+A TP+ E ++ ++D + +M
Sbjct: 84 HHQAVKRISFHVEPFDIPTIKHFIAQIKQAGKQVGLAFKFTTPLVNYERLVQQLDFVTLM 143
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+V PG GGQ + ++QA K S+E+DGG+ NI + + +V+GS
Sbjct: 144 SVPPGKGGQAFNSAVFNNLKQAH----KYHCSIEIDGGIKLDNIHQIQDD-VNFIVMGSG 198
Query: 200 FFN 202
F
Sbjct: 199 FIK 201
>gi|301633387|gb|ADK86941.1| putative ribulose-phosphate 3-epimerase [Mycoplasma pneumoniae FH]
Length = 210
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINII- 81
+ G + IH+DVMD FV N F + + L+ V + HLM+ +++ + +
Sbjct: 21 LEQFFADGLRLIHYDVMD-HFVDNTVFQGEHLDELQQIGFQV-NVHLMVQALEQILPVYL 78
Query: 82 ADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM 139
I+FH E P I+ + I GK+ G+A TP+ E ++ ++D + +M
Sbjct: 79 HHQAVKRISFHVEPFDIPTIKHFIAQIKQAGKQVGLAFKFTTPLVNYERLVQQLDFVTLM 138
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+V PG GGQ + ++QA K S+E+DGG+ NI + + +V+GS
Sbjct: 139 SVPPGKGGQAFNSAVFNNLKQAH----KYHCSIEIDGGIKLDNIHQIQDD-VNFIVMGSG 193
Query: 200 FFN 202
F
Sbjct: 194 FIK 196
>gi|65321186|ref|ZP_00394145.1| COG0036: Pentose-5-phosphate-3-epimerase [Bacillus anthracis str.
A2012]
Length = 83
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGAD 192
M+L+MTVNPGFGGQ+ I S +PKI+Q ++ +R++ +EVDGGV + + V+AGA+
Sbjct: 1 MVLLMTVNPGFGGQKFIHSVLPKIKQVAEMVKERNLEVEIEVDGGVNAETARLCVEAGAN 60
Query: 193 LLVVGSSFFNQKGEISYAKRLN 214
+LV GS+ +NQK + +
Sbjct: 61 VLVAGSAVYNQKDRGEAIRVIR 82
>gi|213616012|ref|ZP_03371838.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 99
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 27 TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAG 85
AGA +HFDVMD +VPN++ G V++SLR Y + D HLM+ +D + A AG
Sbjct: 1 MAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
IITFHPE+S H+ R+L+ I G K G+ NP T ++
Sbjct: 61 ASIITFHPEASEHVDRTLQLIKEHGCKAGLVFNPATSLS 99
>gi|213026096|ref|ZP_03340543.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 103
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 52 DVIRSLRSYS-DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG 110
V++SLR Y + D HLM+ +D + A AG IITFHPE+S H+ R+L+ I G
Sbjct: 1 MVLKSLRQYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKEHG 60
Query: 111 KKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
K G+ NP T ++ L+ V+D++D+IL+M+VNPGFGGQ I
Sbjct: 61 CKAGLVFNPATSLSYLDYVMDKLDVILLMSVNPGFGGQSFIR 102
>gi|78713883|gb|ABB50925.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713885|gb|ABB50926.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713887|gb|ABB50927.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713889|gb|ABB50928.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713891|gb|ABB50929.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713895|gb|ABB50931.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713901|gb|ABB50934.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713903|gb|ABB50935.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713905|gb|ABB50936.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713907|gb|ABB50937.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713909|gb|ABB50938.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713911|gb|ABB50939.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713913|gb|ABB50940.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713915|gb|ABB50941.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|165978672|gb|ABY76790.1| AraD [Chlamydia trachomatis]
gi|165978674|gb|ABY76791.1| AraD [Chlamydia trachomatis]
Length = 111
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I ++GA IH DVMDG FVPNI+FG V+ ++ ++ + H MI + + AG
Sbjct: 1 IEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 61 ADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 111
>gi|78713897|gb|ABB50932.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
gi|78713899|gb|ABB50933.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
Length = 111
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I ++GA IH DVMDG FVPNI+FG V+ ++ ++ + H MI + + AG
Sbjct: 1 IEESGADFIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 61 ADRIIVHFEAAENIKEIVSYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 111
>gi|294678402|ref|YP_003579017.1| ribulose-phosphate 3-epimerase [Rhodobacter capsulatus SB 1003]
gi|294477222|gb|ADE86610.1| ribulose-phosphate 3-epimerase-2 [Rhodobacter capsulatus SB 1003]
Length = 241
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 10/189 (5%)
Query: 31 AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIIT 90
A+ +HFD+MDG FVP + G + + R D HLM++ + I A+AG D+I+
Sbjct: 38 AEVLHFDLMDGVFVPQFTAGPAFVAACRGRG--FLDVHLMVADPLAQIAACAEAGADLIS 95
Query: 91 FHPESSPHIRRSLRTIHA------MGKKTGVAINPETPVAILEDVID-EIDMILIMTVNP 143
H E+ P+ +L I + G+A+ P T +A L ++ D+IL++ ++P
Sbjct: 96 VHAEA-PNAALALARIRSESARLGRPILAGLAVMPGTALAALSGLLALRPDVILVLALDP 154
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
G + + ++ + +AL + L +DGG+T+ I GADL+V GS+ F
Sbjct: 155 RDGAPADVPAAAARLAKLRALCADFAPVLAIDGGITAETIAEACLTGADLVVSGSAIFKA 214
Query: 204 KGEISYAKR 212
+ R
Sbjct: 215 ADPAAMLAR 223
>gi|78713893|gb|ABB50930.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
Length = 111
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I ++GA IH DVMDG FVPNI+FG V+ ++ ++ + H MI + + AG
Sbjct: 1 IEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 61 ADRIIVHFEAAENIKEIVSYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 111
>gi|307278117|ref|ZP_07559201.1| ribulose-phosphate 3 epimerase family protein [Enterococcus
faecalis TX0860]
gi|306505514|gb|EFM74700.1| ribulose-phosphate 3 epimerase family protein [Enterococcus
faecalis TX0860]
Length = 141
Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 91 FHPESSPHIR-RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ 149
H E + R + IH K G+ +NPETP+ + I+ +D I IMTV+PGF GQ+
Sbjct: 1 MHAEVLDGLAFRLIDQIHNANLKAGIVLNPETPIESIFPYIELLDKITIMTVDPGFAGQR 60
Query: 150 LIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGE 206
IE T+ KI + L ++ +E+DG + K + AG D+ +VG S F +
Sbjct: 61 FIEGTLDKIVALRNLREEKGYRYVIEMDGSSNRNSFKRIDAAGPDIYIVGRSGLFGLDED 120
Query: 207 ISYAKRL 213
I A R+
Sbjct: 121 IEKAWRM 127
>gi|78713917|gb|ABB50942.1| ribulose-phosphate 3-epimerase [Chlamydia trachomatis]
Length = 111
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
I ++GA IH DVMDG FVPNI+FG V+ ++ ++ + H MI + + AG
Sbjct: 1 IEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAG 60
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 61 ADRIIVHFEAAENIKEIISHIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 111
>gi|309803285|ref|ZP_07697382.1| ribulose-phosphate 3-epimerase family protein [Lactobacillus iners
LactinV 11V1-d]
gi|308164793|gb|EFO67043.1| ribulose-phosphate 3-epimerase family protein [Lactobacillus iners
LactinV 11V1-d]
Length = 121
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSL-RSYSDSV 64
I PSIL AD L E+I + AG K++H D+MDG FVPN+S+G ++I+ + R + D
Sbjct: 1 MIAPSILNADNLSLKEQILEVKLAGIKRLHIDIMDGHFVPNLSYGPELIKCITRDFPDME 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ HLM +++ + + A+ C ++ FH E++ I + + + G K +AINP+TPV
Sbjct: 61 IEIHLMSNNLPVMLPLFANLSCAVLEFHLEATDQIDKWIEYVRNKGIKVALAINPDTPVE 120
>gi|12044964|ref|NP_072774.1| ribulose-phosphate 3-epimerase [Mycoplasma genitalium G37]
gi|255660133|ref|ZP_05405542.1| ribulose-phosphate 3-epimerase [Mycoplasma genitalium G37]
gi|1351490|sp|P47358|RPE_MYCGE RecName: Full=Probable ribulose-phosphate 3-epimerase; AltName:
Full=Pentose-5-phosphate 3-epimerase; Short=PPE;
AltName: Full=R5P3E
gi|3844701|gb|AAC71330.1| ribulose-phosphate 3-epimerase [Mycoplasma genitalium G37]
gi|166078926|gb|ABY79544.1| ribulose-phosphate 3-epimerase [synthetic Mycoplasma genitalium
JCVI-1.0]
Length = 209
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINII-ADAGCDI 88
G + IH+DVMD FV N +F + + L++ + HLM+ I IN +
Sbjct: 28 GLRLIHYDVMD-QFVHNTAFKGEYLDELKTIG-FDVNVHLMVEQIIPQINFYLSQPNVKR 85
Query: 89 ITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
I+FH E S I+ ++ + GK+ G+A T + + + ID I +M+V PG G
Sbjct: 86 ISFHVEPFSFAKIKELIQLVKENGKEVGLAFKFTTNLQLYQPFFTTIDFITLMSVPPGKG 145
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
GQ E+ ++ A ++ +E+DGG+ NI + +A D +V+GS F
Sbjct: 146 GQAFNEAVFTNLKIA----NHYNLKIEIDGGIKVNNIDQI-KAFVDFIVMGSGFIK 196
>gi|213022884|ref|ZP_03337331.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 203
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 13/180 (7%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR--SISLEVDGGVT 179
P+ ++ ++ ++++I ++ VNPG+G + ++ Q L+G + + +DG +T
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQLLCLLGDKREGKIIVIDGSLT 203
>gi|297840167|ref|XP_002887965.1| hypothetical protein ARALYDRAFT_893120 [Arabidopsis lyrata subsp.
lyrata]
gi|297333806|gb|EFH64224.1| hypothetical protein ARALYDRAFT_893120 [Arabidopsis lyrata subsp.
lyrata]
Length = 129
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 70 MISSIDSHINIIADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
M+++ +++ +A AG T H E + + + + I ++G + GVA+ P TPV +
Sbjct: 1 MVTNPMDYVDQMAKAGASGFTLHVEVAKENWQELVENIKSVGMRPGVALKPGTPVEQVYP 60
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ + P FGGQ+ + + + K+R + ++ +EVDGG+ I +
Sbjct: 61 ----------LVLKPRFGGQKFMPNMMDKVRALRN--KYPTLDIEVDGGLGPSTIDAAAA 108
Query: 189 AGADLLVVGSSFFN 202
AGA+ +V GSS +N
Sbjct: 109 AGANCIVAGSSVYN 122
>gi|166157045|emb|CAO79502.1| multifunctional protein [Ribulose-phosphate 3-epimerase ; unknown
domain] [uncultured candidate division WWE3 bacterium
EJ0ADIGA11YD11]
Length = 422
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 13/222 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I+P+IL D +I + + D++D +P +F D+ + +
Sbjct: 1 MIIPAILEKDIKECERKIKLVEDV-CSAVQIDILDNTIIPGETFQ-DLQKLEEIKTTVDM 58
Query: 66 DCHLMISSIDSHINIIADA---------GCDIITFHPESSPHIRRSLRTIHAMGKKTGVA 116
HLM+ + I + G + L+ +G KTG++
Sbjct: 59 TIHLMVKDPINFIRKLGFLFPTNANRINGVSTLITQVVDKETTENFLKYAKDLGYKTGIS 118
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
IN + +I+ ++I D++ M V PG G + + KI K ++ ++DG
Sbjct: 119 INLDQDNSIISNLIQNADIVQFMGVEPGKQGGNFVPFVLEKISSFKKDFPGKTF--QIDG 176
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GV NI ++ + G + +V+GS+ FN L+ + +
Sbjct: 177 GVNESNILTVSETGVENIVIGSAIFNADDPKKKFLELSSILE 218
>gi|255027619|ref|ZP_05299605.1| hypothetical protein LmonocytFSL_16952 [Listeria monocytogenes FSL
J2-003]
Length = 104
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
+I SI+ AD LG+E+ + AG + +H DVMDG +V N++ G + + +R+ ++
Sbjct: 5 KIAASIMCADQLHLGDELQRLESAGVELLHCDVMDGVYVNNLALGPEYLEIVRNNTEIPL 64
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT 105
D HL + +I++ + I+FH E + + +R
Sbjct: 65 DIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEIIRK 104
>gi|297828562|ref|XP_002882163.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328003|gb|EFH58422.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 42/164 (25%)
Query: 34 IHFDVM------------------DGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSID 75
+H D+M DG FVPN++ GA +I SLR ++++ DCHLM+++
Sbjct: 46 LHMDIMKLVSALTTILMVLLFHLQDGHFVPNLTIGAPLIESLRKHTNAYLDCHLMVTNPI 105
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTI------------------HAMGKKTGVAI 117
++ +A AG TFH E + I +TI + G + VA+
Sbjct: 106 DYVEHMAKAGASGFTFHVEVAKGILAPFQTILIFYGFDLNCLFQRIGNNLSAGMRPAVAL 165
Query: 118 NPETPVAILEDVID---EIDMILIMTVNPGFGGQQLIESTIPKI 158
P TPV + +++ ++M+L+MTV PGF + + + K+
Sbjct: 166 KPGTPVEQVYPLVEGTIPVEMVLVMTVEPGFE---FMPNMMGKV 206
>gi|148928000|ref|ZP_01811397.1| ribulose-phosphate 3-epimerase [candidate division TM7 genomosp.
GTL1]
gi|147886650|gb|EDK72223.1| ribulose-phosphate 3-epimerase [candidate division TM7 genomosp.
GTL1]
Length = 211
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 31 AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIIT 90
A ++H D+MDG F P S + + + D HLM +H+ + +++
Sbjct: 29 ASRVHIDLMDGEFAPVTSIKPIQVWWPEGW---IADIHLMFQRPLAHLETLISLHPNMVI 85
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG-FGGQQ 149
H E+ + L+ + + + GVA+ T + +I D +L+ + + G FGGQ
Sbjct: 86 IHAEAEGDLVGMLKHLQKLDIRAGVALLKPTEPKDAQKLIAVADHVLLFSGDLGHFGGQA 145
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ + K+ + KA ++ + DGG + N+ L ++G D++ VG + + + +
Sbjct: 146 DL-GILKKVTEVKAF--NPNVDIGWDGGANASNVVQLTESGVDIINVGGAIASAEDPAAM 202
Query: 210 AKRL 213
L
Sbjct: 203 YATL 206
>gi|323199881|gb|EFZ84969.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
Length = 122
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + PS+ +AD R E ++ + A +H D+ D F+ NI+FG I+++ ++
Sbjct: 1 MILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNITFGMKTIQAVAQHTRHP 60
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
HLM+SS + +A I H ES + L I A+G K G+A+NP TP+
Sbjct: 61 LSFHLMVSSPQRWLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPL 119
>gi|255027759|ref|ZP_05299745.1| hypothetical protein LmonocytFSL_17891 [Listeria monocytogenes FSL
J2-003]
Length = 109
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 57/106 (53%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I SI+ AD L +E+ + +A K +H DVMDG FV N + GA V++ +++ + +
Sbjct: 3 MIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNTKMLL 62
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
D HL + D +++ A ++FH E+S + ++ I +G
Sbjct: 63 DIHLATVNPDKFVDLYAAIKPAYMSFHVEASRDVNATINHIRELGI 108
>gi|222874543|gb|EEF11674.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P+ +I PSIL+ADF+RLG+E+ N+ +GA IHFDVMD +VPN++FG + +L+ +
Sbjct: 1 MSPTYRIAPSILSADFARLGDEVKNVIASGADWIHFDVMDNHYVPNLTFGPMICEALKPH 60
Query: 61 SDS------VFDCHLMIS 72
+ + D HLM+S
Sbjct: 61 AKTPDGQPVPIDVHLMVS 78
>gi|65321187|ref|ZP_00394146.1| COG0036: Pentose-5-phosphate-3-epimerase [Bacillus anthracis str.
A2012]
Length = 89
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
I+I PSIL+ADFS+LGEEI ++ K GA IH DVMDG FVPNI+ G ++ ++R +
Sbjct: 2 IKIAPSILSADFSKLGEEIKDVEKGGADYIHVDVMDGHFVPNITIGPLIVEAIRXITSLP 61
Query: 65 FDCHLMIS 72
D HLM+
Sbjct: 62 LDVHLMMK 69
>gi|325068808|ref|ZP_08127481.1| ribulose-phosphate 3-epimerase [Actinomyces oris K20]
Length = 91
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADLLVVG 197
TV PGFGGQ IES +PKIR+A+ L+G R + L +VDGG+T++ I+ +AGAD+ V G
Sbjct: 1 TVEPGFGGQSFIESMLPKIRRARELVGVRGLDLRVQVDGGITAQTIERAAEAGADVFVAG 60
Query: 198 SSFFNQKGEISYAKRLNDLKKSA 220
S+ + + +L+++A
Sbjct: 61 SAVYRADD---ALAAICELREAA 80
>gi|255027477|ref|ZP_05299463.1| hypothetical protein LmonocytFSL_16028 [Listeria monocytogenes
FSL J2-003]
Length = 80
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMANSIKEAEDAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISSIDSHINIIA 82
HLM+S+ +++I A
Sbjct: 64 VHLMLSNPENYIEKFA 79
>gi|13905311|gb|AAH06953.1| Rpe protein [Mus musculus]
Length = 76
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M +I PSIL +D + LG E + +GA +H DVMDG FVPNI+FG V+ SLR
Sbjct: 1 MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60
Query: 61 --SDSVFDCHLMISSI 74
D FD H+M+S
Sbjct: 61 LGQDPFFDMHMMVSRP 76
>gi|225554408|gb|EEH02706.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus G186AR]
Length = 86
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
M+L+MTV+PGFGGQ+ + S +PK+ + + +++EVDGG+ ++ +AGA+++
Sbjct: 1 MVLVMTVHPGFGGQKFMASELPKVNALR--VKYPHLNIEVDGGLGEDTVEQAAEAGANVI 58
Query: 195 VVGSSFFNQKGEISYAKRLND 215
V GS+ F + L +
Sbjct: 59 VAGSAVFGAQDPAQAIAMLRE 79
>gi|213423603|ref|ZP_03356583.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 179
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 11/156 (7%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI---------HAMGKKTGVAINPET 121
++ + AG IT E H+ +L + M G+++ P T
Sbjct: 84 VADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPAT 143
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
P+ ++ ++ ++++I ++ VNPG+G + +
Sbjct: 144 PLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYER 179
>gi|223936705|ref|ZP_03628615.1| ribulose-phosphate 3-epimerase [bacterium Ellin514]
gi|223894556|gb|EEF61007.1| ribulose-phosphate 3-epimerase [bacterium Ellin514]
Length = 117
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRN 182
+++ +++ID +L+MTVNPGFGGQ I T+PKI+QA A K + + VDGG+ +
Sbjct: 1 MVQPYLEQIDSLLVMTVNPGFGGQSFIAETLPKIQQAYAWRRDLKLNYHIGVDGGINFKT 60
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ GAD + G+ F ++ ++ +
Sbjct: 61 AAECARVGADAFISGTGVFGERSLKVAVTKMRRI 94
>gi|240047231|ref|YP_002960619.1| D-ribulose-5-phosphate 3 epimerase [Mycoplasma conjunctivae
HRC/581]
gi|239984803|emb|CAT04783.1| D-ribulose-5-phosphate 3 epimerase [Mycoplasma conjunctivae]
Length = 215
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 4/206 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVFDCH 68
S+LA + + + ++ + K G K H D D + N ++ L + + FD H
Sbjct: 6 SVLALNIFKSLKILTKLQKYGLKYAHIDFADEIYAKNFGANYEMTSYLVKLFPNIEFDAH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM + I + G I E + G + V +
Sbjct: 66 LMTKNPFEKIEKLVQIGIKTIFIPIEFLTLEQLIFIKKQYPNINFGAMLQAHQEVQDFAN 125
Query: 129 VIDEIDMILIMTVN-PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+I +I +IL+MT++ G GQ L + KI Q ++L K I + DGG+ N
Sbjct: 126 IIAKIPIILVMTIDKIGGTGQPLNPKLLEKISQIRSLNSK--IKVYSDGGLRKENWDLFE 183
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRL 213
Q D+ + GS F+ +AK+
Sbjct: 184 QFNVDVAIGGSIIFSYPNFSDFAKQW 209
>gi|207108471|ref|ZP_03242633.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPKX_438_CA4C1]
Length = 90
Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGA 191
++L+M+VNPGFGGQ+ ++ + K + K LI + LEVDGGV +NI L QAG
Sbjct: 1 GLVLLMSVNPGFGGQKFLDLVLEKCLKVKELIRHYNPSCLLEVDGGVNDKNIFELQQAGV 60
Query: 192 DLLVVGSSFFNQKGEISYAKRLNDLKK 218
D++V GS F K + L ++++
Sbjct: 61 DVVVSGSYIFKSKDRKLAIEGLQNVRQ 87
>gi|312866448|ref|ZP_07726666.1| putative D-allulose-6-phosphate 3-epimerase [Streptococcus downei
F0415]
gi|311098142|gb|EFQ56368.1| putative D-allulose-6-phosphate 3-epimerase [Streptococcus downei
F0415]
Length = 118
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
++ PS++ + + +EI+ + A+ H D+MDG FVPNI I +R S
Sbjct: 1 MSTVHFSPSLMCMNLDKFTQEITFLNDH-AQSYHIDIMDGHFVPNIPLPPWFIGEVRKLS 59
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR-RSLRTIHAMGKKTG 114
HLM++ ++ + CD I H E + R + IH G K G
Sbjct: 60 SLPMSAHLMVTDPTFWVDQLIAIKCDYICMHAEVINGLAFRLIDQIHEAGLKAG 113
>gi|110224760|emb|CAL07980.1| ribulose-phosphate 3-epimerase [Platanus x acerifolia]
Length = 123
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I + PSIL+A+F++LGE++ + AG IH DVMDG FVPNI+ V+ +LR +
Sbjct: 58 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITICPLVVDALRPVT 117
Query: 62 DSVFDC 67
D D
Sbjct: 118 DLPLDV 123
>gi|167949108|ref|ZP_02536182.1| ribulose-phosphate 3-epimerase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 94
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGAD 192
MIL+M+VNPGFGGQ I +T+ K+R + LI + + E+DGGV NI + AGAD
Sbjct: 1 MILLMSVNPGFGGQSFIPATLDKLRACRKLIDDSGLDIRLEIDGGVKVDNIAEIKAAGAD 60
Query: 193 LLVVGSSFFNQKGEISYAK 211
V GS F E +
Sbjct: 61 TFVAGSGIFGFPEEGDANR 79
>gi|327405588|ref|YP_004346426.1| CBS domain-containing protein [Fluviicola taffensis DSM 16823]
gi|327321096|gb|AEA45588.1| CBS domain containing protein [Fluviicola taffensis DSM 16823]
Length = 333
Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 81/214 (37%), Gaps = 15/214 (7%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
++I SI + L E I ++ +H D D V D IR +RS+ +
Sbjct: 1 MRISASIYSDKKRDLSETIQDLAAHHVDLLHVDCNDNPSV------FDDIRQIRSWCNIP 54
Query: 65 FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
D H++ + + +++ + + +TF E + L + K G+ I T V
Sbjct: 55 IDLHIITKNPSKYYDLLREVPVEYVTFQLE---DLEEELVIPSDITGKKGLGIITPTSVE 111
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
+ D IL+M PG G KIR + +S+ VDGGV
Sbjct: 112 SFDKY-GNFDFILMMATVPGQSGGVFDAVNFKKIRDFQHKYPSKSVH--VDGGVNGEVSF 168
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L G V GS FN S L DL K
Sbjct: 169 ILRNMGVHTSVSGSYLFNAP---SVGHALMDLTK 199
>gi|207092435|ref|ZP_03240222.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPKX_438_AG0C1]
Length = 88
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLL 194
L+M+VNPGFGGQ+ ++ + K + K LI + LEVDGGV +NI L QAG D++
Sbjct: 2 LLMSVNPGFGGQKFLDLVLEKCLKVKELIRHYNPSCLLEVDGGVNDKNIFELQQAGVDVV 61
Query: 195 VVGSSFFNQKGEISYAKRLNDLKK 218
V GS F K + L ++++
Sbjct: 62 VSGSYIFKSKDRKLAIEGLQNVRQ 85
>gi|330903983|gb|EGH34555.1| ribulose-phosphate 3-epimerase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 73
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M P + I PSIL+ADF+RLGEE+ N+ +GA +HFDVMD +VPN++ G V +LR Y
Sbjct: 1 MQPFV-IAPSILSADFARLGEEVDNVLSSGADFVHFDVMDNHYVPNLTIGPMVCSALRKY 59
Query: 61 S-DSVFDCHLMIS 72
+ D HLM+
Sbjct: 60 GVTAPIDVHLMVR 72
>gi|325069059|ref|ZP_08127732.1| ribulose-5-phosphate 3-epimerase [Actinomyces oris K20]
Length = 95
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 7 IVPSILAADFSRLGEEISNIT----KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
I PSIL D + L +E+ + GA IH DVMD FVPN+S+G V+ ++ ++S
Sbjct: 4 IHPSILNCDIAHLADELDRVAGDVGAPGADGIHVDVMDNHFVPNLSWGLPVVEAVLAHSS 63
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPE 94
D HLMI D A+AGC I+T H E
Sbjct: 64 LPVDAHLMIRDADRWAPAYAEAGCQIVTPHAE 95
>gi|242309746|ref|ZP_04808901.1| ribulose-phosphate 3-epimerase [Helicobacter pullorum MIT 98-5489]
gi|239523747|gb|EEQ63613.1| ribulose-phosphate 3-epimerase [Helicobacter pullorum MIT 98-5489]
Length = 77
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
M+VNPGFGGQ+ I +T KI+ K +I + +EVDGGV+ +NI L + G D++V
Sbjct: 1 MSVNPGFGGQKFIPNTFDKIKALKDMIESLNPNCLIEVDGGVSDKNIMELKKCGVDIVVA 60
Query: 197 GSSFFNQKGEISYAKRLNDLK 217
GS F+ +Y ++++ LK
Sbjct: 61 GSYIFSG----NYKEKISSLK 77
>gi|149177801|ref|ZP_01856400.1| Ribulose-phosphate 3-epimerase [Planctomyces maris DSM 8797]
gi|148843291|gb|EDL57655.1| Ribulose-phosphate 3-epimerase [Planctomyces maris DSM 8797]
Length = 91
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
++LIM+V PGFGGQ IES+I KI+Q K++I +I L VDGG+ I AGA+
Sbjct: 1 GLVLIMSVEPGFGGQSFIESSIEKIKQLKSMIPADTI-LSVDGGIAMDTIAETAGAGANY 59
Query: 194 LVVGSSFFNQKGEISYAKRLNDLKKSA 220
VVGS+ F + Y+ +++L A
Sbjct: 60 FVVGSAIF---DQADYSTAVSELAAKA 83
>gi|225554409|gb|EEH02707.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus G186AR]
gi|240273444|gb|EER36964.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus H143]
gi|325087343|gb|EGC40653.1| ribulose-phosphate 3-epimerase [Ajellomyces capsulatus H88]
Length = 84
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 8/81 (9%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSY 60
M+P I PSIL+ADF+ LG S++ K+ + IH D+MDG FVPNI+FGA V+ +R +
Sbjct: 1 MSPPTIIAPSILSADFAALGSACSDLMKSNSDWIHVDIMDGHFVPNITFGAPVVSKIRRH 60
Query: 61 --------SDSVFDCHLMISS 73
FDCH+MI+
Sbjct: 61 VARPSNPGGKGTFDCHMMIAE 81
>gi|213584728|ref|ZP_03366554.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 74
Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS-DSVF 65
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y +
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYGITAPI 65
Query: 66 DCHLMISSI 74
D HLM+ +
Sbjct: 66 DVHLMVKPV 74
>gi|70927745|ref|XP_736190.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56510516|emb|CAH82270.1| hypothetical protein PC000278.05.0 [Plasmodium chabaudi chabaudi]
Length = 96
Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+ ID +L+MTV PGFGGQ + + K+ + ++++++VDGG+ + G
Sbjct: 6 NLIDTVLVMTVEPGFGGQSFMHDMMSKVSFLRK--KYKNLNIQVDGGLNIETTEISASHG 63
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
A+++V G+S FN + +N ++KS
Sbjct: 64 ANIIVAGTSIFNAEDPQFV---INTMRKS 89
>gi|154484222|ref|ZP_02026670.1| hypothetical protein EUBVEN_01933 [Eubacterium ventriosum ATCC
27560]
gi|149734699|gb|EDM50616.1| hypothetical protein EUBVEN_01933 [Eubacterium ventriosum ATCC
27560]
Length = 104
Score = 96.0 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
V +++++ +D ++IMTVNPGF GQ +E KI + K +
Sbjct: 1 MVFWTFTKSFETVKNILHIVDYVMIMTVNPGFAGQSYLEYIDEKIEEFIQNRKKYHYEIV 60
Query: 174 VDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRLNDL 216
VDGG++ IK L Q G ++G SS F + + K+L L
Sbjct: 61 VDGGISEEKIKKLNQKGVKGFILGTSSLFGKGDYVHTIKKLRVL 104
>gi|71893911|ref|YP_279357.1| putative d-ribulose-5-phosphate 3 epimerase [Mycoplasma
hyopneumoniae J]
gi|72080888|ref|YP_287946.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma hyopneumoniae 7448]
gi|71852038|gb|AAZ44646.1| putative d-ribulose-5-phosphate 3 epimerase [Mycoplasma
hyopneumoniae J]
gi|71914012|gb|AAZ53923.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma hyopneumoniae 7448]
Length = 218
Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 86/213 (40%), Gaps = 6/213 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVFDCH 68
SI A + ++ + ++ + G K H D +D + PN + L + + FD H
Sbjct: 7 SISALNIFKVIKILTKLHNNGLKYAHIDFVDQIYAPNFGLNYQIANYLIKLFPNIEFDAH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM-GKKTGVAINPETPVAILE 127
LM + + + G I E R + G+ I +
Sbjct: 67 LMCKNSLEKVEKLIQIGFKTIFLPAEQVSKTD-FKRLNKSYSNINFGLMIQANQKIEDFC 125
Query: 128 DVIDEIDMILIMTVN-PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++I ++IL+MT++ G G+ L + KI + +++ + I + DGG+ N
Sbjct: 126 EIISCSNVILLMTIDKIGGVGEPLNQQLFLKIGEIRSI--NKKIKIYTDGGLRKENWIEF 183
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ D+++ GS F+ +++ + K +
Sbjct: 184 EKWNVDVVIGGSIIFSYPNFSEFSRLWGNQKNA 216
>gi|54020595|ref|YP_116085.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 232]
gi|53987768|gb|AAV27969.1| ribulose-phosphate 3-epimerase [Mycoplasma hyopneumoniae 232]
Length = 218
Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 84/212 (39%), Gaps = 4/212 (1%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVFDCH 68
SI A + ++ + ++ + G K H D +D + PN + L + + FD H
Sbjct: 7 SISALNIFKVIKILTKLHNNGLKYAHIDFVDQIYAPNFGLNYQIANYLIKLFPNIEFDAH 66
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
LM + + + G I E G+ I + +
Sbjct: 67 LMCKNSLEKVEKLIQIGFKTIFLPAEQVSKTDFERLNKSYSNINFGLMIQANQKIEDFCE 126
Query: 129 VIDEIDMILIMTVN-PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+I ++IL+MT++ G G+ L + KI + +++ + I + DGG+ N
Sbjct: 127 IISCSNVILLMTIDKIGGVGEPLNQQLFLKIGEIRSI--NKKIKIYTDGGLRKENWIEFK 184
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ D+++ GS F+ +++ + K +
Sbjct: 185 KWNVDVVIGGSIIFSYPNFSKFSRLWGNQKNA 216
>gi|312601510|gb|ADQ90765.1| D-ribulose-5-phosphate 3 epimerase [Mycoplasma hyopneumoniae 168]
Length = 217
Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 85/213 (39%), Gaps = 6/213 (2%)
Query: 10 SILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS-YSDSVFDCH 68
SI A + ++ + ++ + G K H D +D + PN + L + + FD H
Sbjct: 6 SISALNIFKVIKILTKLHNNGLKYAHIDFVDQIYAPNFGLNYQIANYLIKLFPNIEFDAH 65
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM-GKKTGVAINPETPVAILE 127
LM + + + G I E R + G+ I +
Sbjct: 66 LMCKNSLEKVEKLIQIGFKTIFLPAEQVSKTD-FKRLNKSYSNINFGLMIQANQKIEDFC 124
Query: 128 DVIDEIDMILIMTVN-PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++I + IL+MT++ G G+ L + KI + +++ + I + DGG+ N
Sbjct: 125 EIISCSNAILLMTIDKIGGVGEPLNQQLFLKIGEIRSI--NKKIKIYTDGGLRKENWIEF 182
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ D+++ GS F+ +++ + K +
Sbjct: 183 EKWNVDVVIGGSIIFSYPNFSEFSRLWGNQKNA 215
>gi|283782319|ref|YP_003373074.1| ribulose-phosphate 3-epimerase [Pirellula staleyi DSM 6068]
gi|283440772|gb|ADB19214.1| ribulose-phosphate 3-epimerase [Pirellula staleyi DSM 6068]
Length = 363
Score = 92.1 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 8/198 (4%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNIS-FGADVIRSLRSYSDS-VFDCHLMISSIDSHI 78
E+ ++ A +HFD++D PN + + I + R + H+M +
Sbjct: 166 HELEHLRDA-CDHVHFDLIDRTLDPNAAPIDSSRIAAAREHWTWQPLVLHIMSRTPLRWT 224
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
+ D + FHP+ + + + GV + + L + +D +++
Sbjct: 225 EELGPQ-VDTVLFHPDGEDDPLDVIARARELSLRVGVVWHGAMRFSDLLRFLPMVDYVMV 283
Query: 139 MTVN-PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ + PG GQ + E I + L + DGGV+ + + +LV
Sbjct: 284 LGIERPGQSGQPIREEAIAIATELVNLENRYHFQTMFDGGVSLATLPRIPS---RILVSS 340
Query: 198 SSFFNQKGEISYAKRLND 215
S+ + + + A L +
Sbjct: 341 SAVTSAQHPLRAALMLME 358
>gi|313631044|gb|EFR98638.1| ribulose-phosphate 3-epimerase [Listeria seeligeri FSL N1-067]
Length = 70
Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ + + D
Sbjct: 4 VAPSLLAADYMNMASSIKEAELAGADYLHIDVMDGHFVPNLTFGIDMVEQIGKTATIPLD 63
Query: 67 CHLMISS 73
HLMI +
Sbjct: 64 VHLMIEN 70
>gi|307278118|ref|ZP_07559202.1| conserved domain protein [Enterococcus faecalis TX0860]
gi|306505515|gb|EFM74701.1| conserved domain protein [Enterococcus faecalis TX0860]
Length = 84
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDS 63
++ PS++ D + ++I+ + A H D+MDG +VPNI+ I LR S
Sbjct: 3 KVEFSPSLMTMDLDKFKQQITFLNDHVASY-HIDIMDGHYVPNITLSPWFIEELRKISKL 61
Query: 64 VFDCHLMISSIDSHINIIADAGC 86
HLM+++ + + D C
Sbjct: 62 PVSAHLMVTNPSFWVQQLVDIKC 84
>gi|213422638|ref|ZP_03355701.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 138
Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
+ +A I H ES + L I A+G K G+A+NP TP+ + ++D +
Sbjct: 1 WLPWLAAIRPGWIFIHAESVQNPSEILADIRAIGAKAGLALNPATPLLPYRYLALQLDAL 60
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
+IMT P GQQ I + K+ Q++ + DGG+T R + L AGA LV+
Sbjct: 61 MIMTSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAARLLAAAGAQHLVI 118
Query: 197 GSSFF 201
G + F
Sbjct: 119 GRALF 123
>gi|167949106|ref|ZP_02536180.1| ribulose-phosphate 3-epimerase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 71
Score = 89.8 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 1 MTPSI-QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
M QI PSIL+ADF++LGEE+ N+ +GA+ +HFDVMD +VPN++ G V +LR
Sbjct: 1 MARQADQIAPSILSADFAKLGEEVDNVLASGAEIVHFDVMDNHYVPNLTIGPLVCEALRK 60
Query: 60 YS 61
+
Sbjct: 61 HG 62
>gi|26553898|ref|NP_757832.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma penetrans HF-2]
gi|26453905|dbj|BAC44236.1| d-ribulose-5-phosphate 3 epimerase [Mycoplasma penetrans HF-2]
Length = 212
Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 11/216 (5%)
Query: 7 IVPSILAA-DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVF 65
I PS+ A DF E I I K G IH D MD + ++++ +
Sbjct: 4 ITPSLKAIKDF-NYFEWIKKIEKTGINSIHLDFMDCTRTKDFGLSFEILKYIDPSIRK-- 60
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE-TPVA 124
D H+M+ I+ I I H + + + + + KTG+ I+
Sbjct: 61 DLHIMVDDAYRLIDFIPKVENVYIHTHYDMVKDWEKFIEKTNKLNFKTGITIDLNFRHFE 120
Query: 125 ILEDVIDEIDMILIMTVN-PGFGGQQLIESTIPKIRQAKALIG-KRSISLEVDGGVTSRN 182
L+ I +ID+I M V G G++ + +++ K+ + L+VDG V ++
Sbjct: 121 KLKSFISKIDLINFMAVETIGNTGEKFDNKVLLNVKKIIDEFPLKKDVILQVDGSVREQH 180
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + + +VVGS F KRL +L+K
Sbjct: 181 LADCKKYF-NSIVVGSILFEFDDLE---KRLFELQK 212
>gi|4140462|gb|AAD04066.1| pentose-5-phosphate-3-epimerase [Chlamydia trachomatis]
Length = 82
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
+ AG D I H E++ +I+ + I G + GVA +PET + + I D+I
Sbjct: 1 FVEAFVKAGADRIIVHFEAAENIKEIISYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVI 60
Query: 137 LIMTVNPGFGGQQLIESTIPKI 158
L+M+V+PGF GQ+ I TI +I
Sbjct: 61 LLMSVHPGFCGQKFIPDTIERI 82
>gi|148993155|ref|ZP_01822721.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
SP9-BS68]
gi|147928129|gb|EDK79147.1| ribulose-phosphate 3-epimerase [Streptococcus pneumoniae
SP9-BS68]
Length = 67
Score = 86.0 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+I PSILAAD++ EI + GA+ H D+MD FVP ISFGA V+ SLR +S V
Sbjct: 5 KIAPSILAADYANFEREIKRLEATGAEYAHIDIMDSHFVPQISFGAGVVESLRPHSKMV 63
>gi|213025349|ref|ZP_03339796.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 58
Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V++SLR Y
Sbjct: 1 MIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRQYG 56
>gi|309803239|ref|ZP_07697336.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 11V1-d]
gi|308164747|gb|EFO66997.1| putative ribulose-phosphate 3-epimerase [Lactobacillus iners
LactinV 11V1-d]
Length = 82
Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADLLVV 196
M+V PGFGGQ+ I KI K ++ + + E+DGG+ + AGAD++V
Sbjct: 1 MSVQPGFGGQKFRNEVIDKIVFLKKMMANQGYVIPLEIDGGINDVTANKVKTAGADIVVA 60
Query: 197 GSSFFNQKGEISYAKRLN 214
GS F +L
Sbjct: 61 GSYIFKHGMIKDQIDKLK 78
>gi|170576514|ref|XP_001893659.1| hypothetical protein Bm1_10935 [Brugia malayi]
gi|158600208|gb|EDP37507.1| hypothetical protein Bm1_10935 [Brugia malayi]
Length = 125
Score = 82.5 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIR---------S 56
I PSIL +D S+L +E ++ + GA +H DVMDG FVPN++FG +
Sbjct: 10 IICPSILNSDLSKLADECRSLLQFGADYLHLDVMDGQFVPNLTFGHPGQKFMSDMMEKVR 69
Query: 57 LRSYSDSVFDCHLMISSIDSHINIIADAGCDII 89
+ + + + +++I A AG ++I
Sbjct: 70 ILRSTHPFLNIQVDGGVNLDNVDICAKAGANVI 102
Score = 82.1 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+D +D + + G GQ+ + + K+R ++ ++++VDGGV N+ +A
Sbjct: 40 LDVMDGQFVPNLTFGHPGQKFMSDMMEKVRILRSTHPF--LNIQVDGGVNLDNVDICAKA 97
Query: 190 GADLLVVGSSFFNQKGEISYAK 211
GA+++V G+ +
Sbjct: 98 GANVIVSGTGILKAPNPATAIA 119
>gi|329571355|gb|EGG53042.1| conserved domain protein [Enterococcus faecalis TX1467]
Length = 92
Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVV 196
MTV+PGF GQ+ IE T+ KI + L ++ +E+DG + K + AG D+ +V
Sbjct: 1 MTVDPGFAGQRFIEGTLDKIVALRNLRKEKGYRYVIEMDGSSNRNSFKRIDAAGPDIYIV 60
Query: 197 G-SSFFNQKGEISYAKRL 213
G S F +I A R+
Sbjct: 61 GRSGLFGLNEDIEKAWRM 78
>gi|218675914|ref|YP_002394733.1| hypothetical protein VS_II0131 [Vibrio splendidus LGP32]
gi|218324182|emb|CAV25407.1| Hypothetical protein VS_II0131 [Vibrio splendidus LGP32]
Length = 84
Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 157 KIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+R ++ I + R+I LEVDGGV NIK + +AGAD+ V GS+ F+ + Y + ++
Sbjct: 18 KLRSIRSRINESGRNIRLEVDGGVKVNNIKEIAEAGADMFVAGSAIFDSED---YQQAID 74
Query: 215 DLK 217
++
Sbjct: 75 SMR 77
>gi|86144656|ref|ZP_01062988.1| ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
gi|85837555|gb|EAQ55667.1| ribulose-phosphate 3-epimerase [Vibrio sp. MED222]
Length = 80
Score = 79.4 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 157 KIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+R ++ I + R+I LEVDGGV NIK + +AGAD+ V GS+ F+ + Y + ++
Sbjct: 14 KLRSIRSRINESGRNIRLEVDGGVKVNNIKEIAEAGADMFVAGSAIFDSED---YQQAID 70
Query: 215 DLK 217
++
Sbjct: 71 SMR 73
>gi|213417853|ref|ZP_03350955.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 52
Score = 79.1 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADV 53
I PSIL+ADF+RLGE+ + AGA +HFDVMD +VPN++ G V
Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMV 52
>gi|153841973|ref|ZP_01993457.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AQ3810]
gi|149745424|gb|EDM56675.1| ribulose-phosphate 3-epimerase [Vibrio parahaemolyticus AQ3810]
Length = 65
Score = 77.5 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 159 RQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
R + +I + R I LE+DGGV NI+ + +AGAD+ V GS+ F+Q Y + ++ +
Sbjct: 1 RAVRKMIDESGRDIRLEIDGGVKVDNIREIAEAGADMFVAGSAIFSQPD---YKQVIDQM 57
Query: 217 KKSALAID 224
+ ++
Sbjct: 58 RTELAQVE 65
>gi|315305558|ref|ZP_07875282.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
gi|313626074|gb|EFR95482.1| ribulose-phosphate 3-epimerase [Listeria ivanovii FSL F6-596]
Length = 57
Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRS 59
+ PS+LAAD+ + I AGA +H DVMDG FVPN++FG D++ +
Sbjct: 4 VAPSLLAADYMNMANSIKEAELAGADYLHIDVMDGHFVPNLTFGIDMVEQIGK 56
>gi|213026449|ref|ZP_03340896.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 75
Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 157 KIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K+R+ + I + EVDGGV NI + AGAD+ V GS+ F + Y K ++
Sbjct: 7 KLREVRRRIDASGYDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIF---DKPDYKKVID 63
Query: 215 DLK 217
+++
Sbjct: 64 EMR 66
>gi|312866325|ref|ZP_07726543.1| D-allulose-6-phosphate 3-epimerase [Streptococcus downei F0415]
gi|311098019|gb|EFQ56245.1| D-allulose-6-phosphate 3-epimerase [Streptococcus downei F0415]
Length = 92
Score = 75.6 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVV 196
MTV+PGF GQ+ +EST+ KI Q + L ++ +E+DG + K + QA D+ V+
Sbjct: 1 MTVDPGFAGQRFLESTLDKIVQLRELRQEKGYHYLIEMDGSSNRKTFKCIDQANPDIYVI 60
Query: 197 G-SSFFNQKGEISYAKR 212
G S F I +
Sbjct: 61 GRSGLFAVTDNIEESWA 77
>gi|297840163|ref|XP_002887963.1| hypothetical protein ARALYDRAFT_893114 [Arabidopsis lyrata subsp.
lyrata]
gi|297333804|gb|EFH64222.1| hypothetical protein ARALYDRAFT_893114 [Arabidopsis lyrata subsp.
lyrata]
Length = 75
Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 10/67 (14%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDG----------CFVPNISFGADV 53
S +I PS+L++DF+ L E + GA +H D+M FVPN++ GA V
Sbjct: 5 SPKIAPSMLSSDFANLEAEAKRMIDLGANWLHMDIMHAVGIIMCYSGKHFVPNLTIGAPV 64
Query: 54 IRSLRSY 60
I SLR+
Sbjct: 65 IESLRNC 71
>gi|218259990|ref|ZP_03475475.1| hypothetical protein PRABACTJOHN_01136 [Parabacteroides johnsonii
DSM 18315]
gi|218224810|gb|EEC97460.1| hypothetical protein PRABACTJOHN_01136 [Parabacteroides johnsonii
DSM 18315]
Length = 55
Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 164 LIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+I + ++ +EVDGGV + K L++ GAD+LV GS F + + L +L
Sbjct: 1 MILAKGLNTLIEVDGGVNMQTAKPLLEVGADVLVAGSFVFRSPDPLKTIRELKEL 55
>gi|169838582|ref|ZP_02871770.1| ribulose-phosphate 3-epimerase [candidate division TM7 single-cell
isolate TM7a]
Length = 66
Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
KI+ + + ++I +EVDGG+ + K + +AGA++LV GS
Sbjct: 15 FKKIKDLREI--DKNIDIEVDGGINNETAKLVKEAGANILVAGSYI 58
>gi|213621058|ref|ZP_03373841.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 109
Score = 69.4 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIH---------AMGKKTG 114
+ D HLM++ + AG IT E H+ +L + M G
Sbjct: 2 IKDVHLMVADQWAAAQACVKAGAHCITLQAEGDIHLHHTLSWLGQQTVPVIDGEMPVIRG 61
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
+++ P TP+ ++ ++ ++++I ++ VNPG+G + ++ Q
Sbjct: 62 ISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSKMRSSDLYERVAQL 108
>gi|255030828|ref|ZP_05302779.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes LO28]
Length = 57
Score = 69.4 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I +EVDGGV K AGA++ V GS + K + +L +
Sbjct: 7 DIEIEVDGGVDHETAKLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 54
>gi|313618302|gb|EFR90354.1| ribulose-phosphate 3-epimerase [Listeria innocua FSL S4-378]
Length = 50
Score = 69.0 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I +EVDGGV K AGA++ V GS + K + +L +
Sbjct: 1 IEIEVDGGVDHETAKLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAI 47
>gi|225629625|ref|ZP_03787630.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591521|gb|EEH12556.1| ribulose-phosphate 3-epimerase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 63
Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 158 IRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K +I +R++ + VDGG+ S N +++AGAD+LV GS+ F + K +ND
Sbjct: 1 ISTIKKMIQERNLKTQISVDGGINSFNAADIIKAGADILVAGSAIFKAED---IKKAVND 57
Query: 216 LKKSAL 221
LK +L
Sbjct: 58 LKNPSL 63
>gi|9187987|emb|CAB97126.1| putative ribulose-phosphate 3-epimerase [Daucus carota]
Length = 42
Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 29 AGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
AG IH DVMDG FVPNI+ G V+ +LR +D D HL+
Sbjct: 1 AGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLV 42
>gi|116334978|ref|YP_802473.1| ribulose-phosphate 3-epimerase [Candidatus Carsonella ruddii PV]
gi|116235259|dbj|BAF35107.1| ribulose-phosphate 3-epimerase [Candidatus Carsonella ruddii PV]
Length = 173
Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 25/151 (16%)
Query: 29 AGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDI 88
+ K HFD+M+ +V N SF + I S+ + + + + ++ +
Sbjct: 7 SKIKCYHFDLMEFSYVKNNSFSINEINSILLILSKIMNIKYEVHVMSKYLLLSKIDKNKS 66
Query: 89 ITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ 148
I H+ + I+ + T N + ILIM+V PGFG Q
Sbjct: 67 I-------NHLENKMYKINNIALSTNFCWNYIKYFNY--------NNILIMSVIPGFGNQ 111
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ + ST+ K+++ + +DGGV
Sbjct: 112 KFLISTLNKVKK----------KINIDGGVN 132
>gi|207110643|ref|ZP_03244805.1| ribulose-phosphate 3-epimerase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 40
Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 5 IQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPN 46
+++ PS+L+ADF L EEI ++ + A +H DVMDG +VPN
Sbjct: 1 MKVAPSLLSADFMHLAEEIESV--SNADFLHVDVMDGHYVPN 40
>gi|331658048|ref|ZP_08359010.1| conserved hypothetical protein [Escherichia coli TA206]
gi|331056296|gb|EGI28305.1| conserved hypothetical protein [Escherichia coli TA206]
Length = 54
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+I R I +EVDGGV N+K + +AGADL+VVG + FN++ SY
Sbjct: 1 MISGRDIQIEVDGGVNLDNVKQVKEAGADLIVVGGALFNKQPHESY 46
>gi|255028945|ref|ZP_05300896.1| hypothetical protein LmonL_06726 [Listeria monocytogenes LO28]
Length = 55
Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLR 58
+IVPS+ AD R+ E++ + K +H D+MDG FVPNI+FG D I+ ++
Sbjct: 3 KIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMK 55
>gi|191174719|ref|ZP_03036165.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli F11]
gi|190905002|gb|EDV64695.1| D-allulose-6-phosphate 3-epimerase [Escherichia coli F11]
Length = 93
Score = 65.2 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 152 ESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEIS 208
+ K+ + KA + + +EVDG + L+ AGAD+ +VG S FN I
Sbjct: 10 RTAAHKVAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLFNHAENID 69
Query: 209 YAKRL 213
A R+
Sbjct: 70 EAWRI 74
>gi|106357|pir||A34525 hypothetical protein ARSH1 - human (fragment)
Length = 95
Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
S+ +E DGGV S + +AGA++ V GS+ + S L ++
Sbjct: 35 PSLDIEGDGGVGSDTVHKCAEAGANMTVSGSAIMRSEDPRSVINLLRNI 83
>gi|150015753|ref|YP_001308007.1| hypothetical protein Cbei_0867 [Clostridium beijerinckii NCIMB
8052]
gi|149902218|gb|ABR33051.1| hypothetical protein Cbei_0867 [Clostridium beijerinckii NCIMB
8052]
Length = 294
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/227 (21%), Positives = 87/227 (38%), Gaps = 29/227 (12%)
Query: 21 EEISNITKAG-AKQIHFDV---------MDGCFVPNISFGADVIRSLRSYSDS---VFDC 67
EE+ + K G K +H D+ DG + + F + L + + +
Sbjct: 56 EEVEILLKQGNIKTLHVDINFDDYSNFGSDGPSLNSHIFNISFLERLNTIAGLYEVFLNV 115
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAIN------ 118
HL+ HI I + F E ++ + I MG I
Sbjct: 116 HLLTDYPKIHIKDIKHINVGAVCFQLEVVKDRQELKEIIDEIIEMGACVSPVIEVVGTDR 175
Query: 119 --PETPVAILEDVIDEIDMILIMTVNP-GFGGQQLIESTIPKIRQAKALIGK--RSIS-- 171
P+T ILE ++ D I ++T G + + ++ I R+
Sbjct: 176 FIPKTKKEILEFILPFQDKIGMLTFQVEATGARSSNSFGMLNSKEIADYINYFTRNFDGT 235
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+++ GG+T+ IKS ++ G++ LV G+ FN K S + + ++ K
Sbjct: 236 VQMQGGITTETIKSAIKLGSEFLVCGTEIFNNKLGYSSMEVIENMLK 282
>gi|289548482|ref|YP_003473470.1| ribulose-phosphate 3-epimerase [Thermocrinis albus DSM 14484]
gi|289182099|gb|ADC89343.1| ribulose-phosphate 3-epimerase [Thermocrinis albus DSM 14484]
Length = 52
Score = 62.9 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGA 51
+L+AD LGE++ + K GA IH DVMDG FVP+I+F
Sbjct: 8 VLSADSWNLGEQVEAVVKGGADLIHLDVMDGRFVPDITFCP 48
>gi|296040829|gb|ADG85382.1| ribulose-phosphate 3-epimerase [Spartina alterniflora]
Length = 42
Score = 61.7 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV 64
+ + AG IH DVMDG FVPNI+ G ++ +LR +D
Sbjct: 1 VKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 42
>gi|53803128|ref|YP_115138.1| hexulose-6-phosphate synthase/SIS domain-containing protein
[Methylococcus capsulatus str. Bath]
gi|53756889|gb|AAU91180.1| putative hexulose-6-phosphate synthase/SIS domain protein
[Methylococcus capsulatus str. Bath]
Length = 389
Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I + K + + V GG+ + +AGAD++VVG++ + + A+ +
Sbjct: 153 LESIARLK-----LPVRISVAGGINQNTASRVAKAGADIVVVGAAIYGAPCPATAARTIR 207
Query: 215 DLKKSA 220
+L + A
Sbjct: 208 ELLEGA 213
>gi|109156397|gb|ABG26348.1| hexulose-6-phosphate synthase and isomerase [Methylomonas sp. 16a]
Length = 394
Score = 60.6 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 12/177 (6%)
Query: 50 GADVIRSLR-SYSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESSPHIRRSLRTIH 107
G +++++LR Y D + L + AG DI T + I
Sbjct: 43 GINLVKALRERYPDKLLLVDLKTMDAGEYEAGAFYAAGADICTV--LGVSGLATIGGVIK 100
Query: 108 AMGKKTGVA----INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
A K IN + IM V+ G Q ++ + + +
Sbjct: 101 AAKKHAAEVQVDLINVPNKAECARESAKLG--AQIMGVHTGLDAQAAGQTPFTDLNEVAS 158
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L ++ + V GG+ I V+AGA+++VVG++ + A+ + +L ++A
Sbjct: 159 L--GLNVRVSVAGGIKPATIDQTVKAGANIIVVGAAIYGAPSPAEAAREIRELVEAA 213
>gi|213613021|ref|ZP_03370847.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 87
Score = 58.3 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA + L + + +H D+MDG F P + G + L + D HLM
Sbjct: 26 ILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQLPQ--TFIKDVHLM 83
Query: 71 ISS 73
++
Sbjct: 84 VAD 86
>gi|307823403|ref|ZP_07653632.1| 3-hexulose-6-phosphate synthase [Methylobacter tundripaludum SV96]
gi|307735388|gb|EFO06236.1| 3-hexulose-6-phosphate synthase [Methylobacter tundripaludum SV96]
Length = 213
Score = 57.5 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 30/51 (58%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
++ + V GG+ ++ +V+AGA+++VVG++ + A+ + +L +
Sbjct: 162 NVRISVAGGIKPSTVQDVVRAGANIIVVGAAIYGAASPADAAREIRELVDA 212
>gi|406423|gb|AAD12467.1| unknown [Mycoplasma genitalium]
Length = 88
Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 83 DAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT 140
I+FH E S I+ ++ + GK+ G+A T + + + ID I +M+
Sbjct: 11 QPNVKRISFHVEPFSFAKIKELIQLVKENGKEVGLAFKFTTNLQLYQPFFTTIDFITLMS 70
Query: 141 VNPGFGGQQLIESTI 155
V PG GGQ E+
Sbjct: 71 VPPGKGGQAFNEAVF 85
>gi|136262|sp|P14637|TRPA_METVO RecName: Full=Tryptophan synthase alpha chain
gi|150073|gb|AAA72855.1| tryptophan synthase A [Methanococcus voltae PS]
Length = 284
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 17/183 (9%)
Query: 50 GADVIRSLRSYSDSVFDCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSL 103
DV+R R +SD+ + + ++ + +AG + + +
Sbjct: 87 SFDVLREFRKFSDTPV-VLMTYYNPIYKRGIENFVIQAKEAGANGLII-VDLPLDEAEQY 144
Query: 104 RTI-HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ--QLIESTIPKIRQ 160
R I T + P TP L + + L + G G + T I +
Sbjct: 145 RAICKKHDMGTVFLVAPNTPDERLMYSDEASTLFLYVISTFGITGARGSFEKMTFEFIAR 204
Query: 161 AKALIGKRSISLEVDG-GV-TSRNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLNDLK 217
AK L K + + G G+ + + +++ GAD ++VGS+F + K + + LK
Sbjct: 205 AKNLCDKNKLYV---GFGISNGEHAEKIIENGADGVIVGSAFVDIIKEYGDSNETIYKLK 261
Query: 218 KSA 220
+ A
Sbjct: 262 ELA 264
>gi|108799753|ref|YP_639950.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. MCS]
gi|119868863|ref|YP_938815.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. KMS]
gi|108770172|gb|ABG08894.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. MCS]
gi|119694952|gb|ABL92025.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. KMS]
Length = 216
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 18/174 (10%)
Query: 34 IHFDVM-DGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS--IDSHINIIADAGCDIIT 90
+H D+M +G +P G + + S FD HL+ S +D+ + + +
Sbjct: 44 VHVDIMAEGEGLPA-GVGFTELEEIARAVPSGFDVHLIGSPAFVDAALPQVLTYAPAKVF 102
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVA----INPETPVAILEDVIDEIDMILIMTVNPGFG 146
+ I A G VA + + D +L+M + PG
Sbjct: 103 LPWAAFS--EERSAAIRAAGGSAWVALWQEWDALSEPEPRWPAAP--DGVLVMLIEPGSR 158
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ ++ A + + VDGGVT V AGA+ +VVG +
Sbjct: 159 D----RCRVERLAIVAACAA--GLPVIVDGGVTEDVAPLCVTAGAEAMVVGRAL 206
>gi|126465399|ref|YP_001040508.1| orotidine 5'-phosphate decarboxylase [Staphylothermus marinus F1]
gi|126014222|gb|ABN69600.1| Orotidine 5'-phosphate decarboxylase [Staphylothermus marinus F1]
Length = 217
Score = 55.6 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I+ I +I+ K I + + V GG+ K LV AGAD++VVGS+ + A
Sbjct: 152 IDQLIDEIKMLKKNI---NAKIAVAGGIKHGKAKPLVDAGADIVVVGSAITKADDPVESA 208
Query: 211 KRLND 215
KR +
Sbjct: 209 KRFME 213
>gi|297526318|ref|YP_003668342.1| Orotidine 5'-phosphate decarboxylase [Staphylothermus hellenicus
DSM 12710]
gi|297255234|gb|ADI31443.1| Orotidine 5'-phosphate decarboxylase [Staphylothermus hellenicus
DSM 12710]
Length = 217
Score = 55.6 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I+ I +I+ + I + + V GG+ K LV AGAD++VVGS+ + + A
Sbjct: 152 IDQLIDEIKMLRKNI---NAKIAVAGGIKHGKAKPLVDAGADIVVVGSAITKAEDPVDSA 208
Query: 211 KRLND 215
++ +
Sbjct: 209 RKFLE 213
>gi|332157953|ref|YP_004423232.1| tryptophan synthase subunit alpha [Pyrococcus sp. NA2]
gi|331033416|gb|AEC51228.1| tryptophan synthase subunit alpha [Pyrococcus sp. NA2]
Length = 248
Score = 55.2 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 16/184 (8%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLR 104
D++R+ R +SD + + I DAG D + H + +
Sbjct: 69 FDIVRNFRKHSDKPI-VLMTYYNPVYRTGLRRFIEKAKDAGVDGMLIVDLPVLHSQEFVN 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI--ESTIPKIRQAK 162
G KT P TP L ++ + + G G + E+ +++A+
Sbjct: 128 VAREEGMKTVFLAAPNTPDERLREIDRVTTGFVYLISLYGTTGARERIPETAFNLLKRAR 187
Query: 163 ALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ + L V G GV+ ++K L++AGAD +VVGS+ +K + + K
Sbjct: 188 KICRNK---LAV-GFGVSKREHVKMLLEAGADGVVVGSALIKIIENGGGSKEIRE-KVKE 242
Query: 221 LAID 224
LAID
Sbjct: 243 LAID 246
>gi|254168530|ref|ZP_04875374.1| Thiamine monophosphate synthase/TENI subfamily, putative
[Aciduliprofundum boonei T469]
gi|197622585|gb|EDY35156.1| Thiamine monophosphate synthase/TENI subfamily, putative
[Aciduliprofundum boonei T469]
Length = 426
Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 16/209 (7%)
Query: 13 AADFSRLGEEISNITKA---GAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDCH 68
A DF L + +A G I P I S G +R ++
Sbjct: 7 ALDFMILERALKVADEAVKGGVDWIEV------GTPLIKSEGMRAVREIKRRFKKTVVAD 60
Query: 69 LMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAIL 126
L + + + A +G ++T + I S++ G K V + A
Sbjct: 61 LKTMDVGRVEVEMAAKSGASVVTVLSLADDSTIEDSIKAARKYGAKVMVDLINHPDPAKR 120
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ + V+ G Q L ++ + +R+ + + SI + GG+ S +
Sbjct: 121 AKEVEKLG-ADYVCVHVGVDQQMLGKNPLEILREVASSV---SIPVAAAGGINSETAADI 176
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
V+ GAD+++VG + A+R+ +
Sbjct: 177 VKNGADIVIVGGAIIKAPNVEEAARRIKE 205
>gi|126435394|ref|YP_001071085.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. JLS]
gi|126235194|gb|ABN98594.1| ribulose-phosphate 3-epimerase [Mycobacterium sp. JLS]
Length = 216
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 63/174 (36%), Gaps = 18/174 (10%)
Query: 34 IHFDVM-DGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS--IDSHINIIADAGCDIIT 90
+H D+M +G +P G + + S FD HL+ S +D+ + + +
Sbjct: 44 VHVDMMAEGEGLPA-GVGLRELEEIACAVPSGFDVHLIGSPAFVDAALPRVLTYAPAKVF 102
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVA----INPETPVAILEDVIDEIDMILIMTVNPGFG 146
+ I A G VA + + D +L+M + PG
Sbjct: 103 LPWAAFS--EERSAAIRAAGGSAWVALWQEWDALSEPEPRWPAAP--DGVLVMLIEPGTR 158
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ ++ A + + VDGGVT V AGA+ +VVG +
Sbjct: 159 D----RCRVERLAIVAACAA--GLPVIVDGGVTEDVAPLCVTAGAEAMVVGRAL 206
>gi|18976592|ref|NP_577949.1| hexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate
formaldehyde lyase) [Pyrococcus furiosus DSM 3638]
gi|18892157|gb|AAL80344.1| hexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate
formaldehyde lyase) [Pyrococcus furiosus DSM 3638]
Length = 434
Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + V+ G Q +S + + + + I + V GG+ I +++ GA ++V
Sbjct: 177 VHYILVHTGIDEQAQGKSPLEDLEKVVKAVK---IPVAVAGGLNLETIPKVIELGATIIV 233
Query: 196 VGSSFFNQKGEISYAKRLNDL 216
VGS+ K +++ DL
Sbjct: 234 VGSAITKAKDPEEVTRKIIDL 254
>gi|111027156|ref|YP_709134.1| 3-hexulose-6-phosphate synthase [Rhodococcus jostii RHA1]
gi|110825695|gb|ABH00976.1| 3-hexulose-6-phosphate synthase [Rhodococcus jostii RHA1]
Length = 209
Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V GGV I ++ AGAD+ V G + ++ + AK L D
Sbjct: 164 VAGGVKVDTIAAVRDAGADVAVAGGAIYSAEDPAVAAKALKD 205
>gi|297619101|ref|YP_003707206.1| tryptophan synthase subunit alpha [Methanococcus voltae A3]
gi|297378078|gb|ADI36233.1| tryptophan synthase, alpha subunit [Methanococcus voltae A3]
Length = 270
Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 71/183 (38%), Gaps = 17/183 (9%)
Query: 50 GADVIRSLRSYSDSV---FDCHLMISS--IDSHINIIADAGCDIITFHPESSPHIRRSLR 104
D+++ R SD+ + ++ + I+ + AG + + + +
Sbjct: 74 SFDLLKEFRKDSDTPVVLMTYYNLVYNRGIEDFVIDAKKAGANGLII-VDLPLDEAEEYQ 132
Query: 105 TI-HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPKIRQA 161
I T + P TP + + M L + G G + T I++A
Sbjct: 133 KICKKHEFGTIFLVAPNTPDERIIYSDESSTMFLYLISTFGITGTRDSFEKMTFDFIKRA 192
Query: 162 KALIGKRSISLEVDG-GV-TSRNIKSLVQAGADLLVVGSSFFN----QKGEISYAKRLND 215
K+L S L V G G+ ++ ++L+ GAD ++VGS+F N +L +
Sbjct: 193 KSLCSDNS-KLYV-GFGISNEKHAENLISQGADGIIVGSAFVNIIKEYGDSEDTIIKLKE 250
Query: 216 LKK 218
L K
Sbjct: 251 LAK 253
>gi|298675583|ref|YP_003727333.1| formaldehyde-activating enzyme [Methanohalobium evestigatum Z-7303]
gi|298288571|gb|ADI74537.1| formaldehyde-activating enzyme [Methanohalobium evestigatum Z-7303]
Length = 392
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 65/170 (38%), Gaps = 8/170 (4%)
Query: 49 FGADVIRSLRS-YSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPES-SPHIRRSLRT 105
+G DV+ LR D+ L + +++DA D I + I +++
Sbjct: 212 YGVDVVSRLREVKPDAFIVADLKTLDTGNLEARMVSDATADAIVVSALAPVSTINKAINE 271
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
H G + E + +DE+ ++ + + +I I++
Sbjct: 272 AHKTGIYVVMDTLNEPDPMSILKQLDELPDVVELHRAIDVEETEYAWGSIDAIKEL---- 327
Query: 166 GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + V GG+ I ++AGAD++V G + N K +++ D
Sbjct: 328 -SPKIMVAVAGGIRVDTIPDALKAGADIVVAGRAITNAKDVRQVSEKFLD 376
>gi|332295344|ref|YP_004437267.1| Thiamine-phosphate pyrophosphorylase [Thermodesulfobium narugense
DSM 14796]
gi|332178447|gb|AEE14136.1| Thiamine-phosphate pyrophosphorylase [Thermodesulfobium narugense
DSM 14796]
Length = 335
Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ KIR + GG+ S+N K + AGAD + VGS F++ K I KRL
Sbjct: 274 LKKIRALTTTF------IYAIGGINSKNAKEVFNAGADGICVGSGFWHAKDRIEEIKRL 326
>gi|156937225|ref|YP_001435021.1| tryptophan synthase, alpha chain [Ignicoccus hospitalis KIN4/I]
gi|156566209|gb|ABU81614.1| tryptophan synthase, alpha chain [Ignicoccus hospitalis KIN4/I]
Length = 250
Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 12/158 (7%)
Query: 55 RSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI----HAMG 110
++ R++ + + + D C ++ L I G
Sbjct: 78 KACRAFPEERIIVMTYYDDVKENYEEFLDKACGGGVLFADAVIDFADRLEEIASKAKERG 137
Query: 111 KKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-RQAKALIGKRS 169
K ++P TP ++ + D ++ + V P G + IP + R+ K+L K
Sbjct: 138 KSAVFFVSPTTPDHVIRKAAELSDPVVYLGVRPATG--IPLPVGIPNLLRRVKSLTNKY- 194
Query: 170 ISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
V G G+ + V AGAD +VVGS+ GE
Sbjct: 195 ---VVVGFGLKEEEVPQAVGAGADGVVVGSALVKALGE 229
>gi|254166613|ref|ZP_04873467.1| Thiamine monophosphate synthase/TENI subfamily, putative
[Aciduliprofundum boonei T469]
gi|289596134|ref|YP_003482830.1| Orotidine 5'-phosphate decarboxylase [Aciduliprofundum boonei T469]
gi|197624223|gb|EDY36784.1| Thiamine monophosphate synthase/TENI subfamily, putative
[Aciduliprofundum boonei T469]
gi|289533921|gb|ADD08268.1| Orotidine 5'-phosphate decarboxylase [Aciduliprofundum boonei T469]
Length = 426
Score = 52.5 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/209 (18%), Positives = 79/209 (37%), Gaps = 16/209 (7%)
Query: 13 AADFSRLGEEISNITKA---GAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDCH 68
A DF L + +A GA I P I S G +R ++
Sbjct: 7 ALDFMILERALKVADEAVKGGADWIEV------GTPLIKSEGMRAVREIKRRFKKTVVAD 60
Query: 69 LMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAIL 126
L + + + +G ++T + I S++ G + V + A
Sbjct: 61 LKTMDVGRVEVEMATKSGASVVTVLSLADDSTIEDSIKAARKYGARVMVDLINHPEPAKR 120
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
++++ + V+ G Q L ++ + +R+ + + SI + GG+ S +
Sbjct: 121 AKEVEKLG-ADYVCVHVGVDQQMLGKNPLEILREVASTV---SIPVAAAGGINSETAADI 176
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLND 215
V+ GAD+++VG + A+++ +
Sbjct: 177 VKNGADIVIVGGAIIKAPNVEEAARKIKE 205
>gi|313610547|gb|EFR85673.1| ribulose-phosphate 3-epimerase [Listeria monocytogenes FSL
F2-208]
Length = 41
Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFV 44
+IVPS+ AD R+ E++ + K G +H D+MDG FV
Sbjct: 3 KIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFV 41
>gi|169839827|ref|ZP_02873015.1| ribulose-phosphate 3-epimerase [candidate division TM7
single-cell isolate TM7a]
Length = 56
Score = 52.1 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 43 FVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDII 89
FVPNIS+GA VI SLR +S+ VFD HLM++ D I I
Sbjct: 1 FVPNISYGAPVISSLRKHSNLVFDVHLMVNEPDYLIKDFHIFLYCAI 47
>gi|254490176|ref|ZP_05103367.1| 3-hexulose-6-phosphate synthase [Methylophaga thiooxidans DMS010]
gi|224464662|gb|EEF80920.1| 3-hexulose-6-phosphate synthase [Methylophaga thiooxydans DMS010]
Length = 195
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
++ + V GG+ I+S VQAGA ++VVG++ + AK L L +A
Sbjct: 144 NVKVSVAGGINKDTIQSTVQAGAAIVVVGAAIYGAPSPAESAKELRALVDAA 195
>gi|53802831|ref|YP_115436.1| hexulose-6-phosphate synthase [Methylococcus capsulatus str. Bath]
gi|53802837|ref|YP_115430.1| hexulose-6-phosphate synthase [Methylococcus capsulatus str. Bath]
gi|53756592|gb|AAU90883.1| hexulose-6-phosphate synthase [Methylococcus capsulatus str. Bath]
gi|53756598|gb|AAU90889.1| hexulose-6-phosphate synthase [Methylococcus capsulatus str. Bath]
Length = 215
Score = 52.1 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 29/53 (54%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ + V GG+ + + +V+ GA+++VVG++ + A+ + + +A A
Sbjct: 163 VRISVAGGIKASTAQQVVKTGANIIVVGAAIYGAASPADAAREIYEQVVAASA 215
>gi|119962633|ref|YP_946302.1| 3-hexulose-6-phosphate synthase [Arthrobacter aurescens TC1]
gi|119949492|gb|ABM08403.1| 3-hexulose-6-phosphate synthase [Arthrobacter aurescens TC1]
Length = 207
Score = 51.7 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+R + + V GGV + I ++ AGAD+ V GS+ ++ AK L
Sbjct: 147 LRGLLNAGEEARVPFSVAGGVNASTIAAVQLAGADVAVAGSAIYSAADPELAAKELKA 204
>gi|319891539|ref|YP_004148414.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
pseudintermedius HKU10-03]
gi|317161235|gb|ADV04778.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
pseudintermedius HKU10-03]
Length = 212
Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R+ K++I ++ + V GG+ +K + G DL++VG
Sbjct: 133 IAVHIGYDLQAEGQSPLESLRKVKSVI--KNAKIAVAGGIKPETVKEVADEGPDLIIVGG 190
Query: 199 SFFNQKGEISYAKRLND 215
N AK++ +
Sbjct: 191 GIANADDPREAAKQIRE 207
>gi|323465294|gb|ADX77447.1| 3-hexulose-6-phosphate synthase [Staphylococcus pseudintermedius
ED99]
Length = 212
Score = 51.3 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R+ K++I ++ + V GG+ +K + G DL++VG
Sbjct: 133 IAVHIGYDLQAEGQSPLESLRKVKSVI--KNAKIAVAGGIKPETVKEVADEGPDLIIVGG 190
Query: 199 SFFNQKGEISYAKRLND 215
N AK++ +
Sbjct: 191 GIANADDPREAAKQIRE 207
>gi|294494919|ref|YP_003541412.1| 3-hexulose-6-phosphate synthase [Methanohalophilus mahii DSM 5219]
gi|292665918|gb|ADE35767.1| 3-hexulose-6-phosphate synthase [Methanohalophilus mahii DSM 5219]
Length = 392
Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 65/167 (38%), Gaps = 8/167 (4%)
Query: 49 FGADVIRSLRS-YSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESS-PHIRRSLRT 105
+G DVI LR D+ L + ++ADA D I + P + +++
Sbjct: 212 YGVDVITKLREVKPDAFIVADLKTLDTGNLEARMVADATADAIVVSALAPIPTLEKAISE 271
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
H G + + + ++E+ ++ + +I I++
Sbjct: 272 AHKTGIYAVMDTLNQPDPMAVLKELNELPDVVELHRAIDVEDTAYAWGSIDAIKEL---- 327
Query: 166 GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
I + V GGV I ++AGAD+LVVG + N K A++
Sbjct: 328 -SPKILVAVAGGVRVHTIPDALKAGADILVVGRAITNSKDIRQSAEQ 373
>gi|99078624|ref|YP_611882.1| thiamine-phosphate pyrophosphorylase [Ruegeria sp. TM1040]
gi|99035762|gb|ABF62620.1| thiamine-phosphate pyrophosphorylase [Ruegeria sp. TM1040]
Length = 198
Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + G K + + D DV++ + S + H + ++ + +
Sbjct: 16 LQRMLPLGVKLVQLRIKDQ--------PIDVVQQQITRSRGLCRQHGAVLVVNDYWQLAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+ GCD + E L+ I A G K GV+ + E + + + E + + V
Sbjct: 68 ELGCDWVHLGQEDLDDAD--LKAIRAAGLKLGVSTHDEDELDRVLALSPE--YVALGPVY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
P + E +P++R+ K IG SI L GG++ + +AGAD++
Sbjct: 124 PTILKHMKWHEQGLPRVREWKTRIG--SIPLVGIGGMSVERAPGVFEAGADIV 174
>gi|253997981|ref|YP_003050044.1| 3-hexulose-6-phosphate synthase [Methylovorus sp. SIP3-4]
gi|313200048|ref|YP_004038706.1| 3-hexulose-6-phosphate synthase [Methylovorus sp. MP688]
gi|253984660|gb|ACT49517.1| 3-hexulose-6-phosphate synthase [Methylovorus sp. SIP3-4]
gi|312439364|gb|ADQ83470.1| 3-hexulose-6-phosphate synthase [Methylovorus sp. MP688]
Length = 221
Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + V GG+ +K +V AGA+++V G++ + + A ++ L K
Sbjct: 155 GVKVSVAGGIKPATVKQVVDAGANIVVAGAAIYGAADPAAAAAEISGLAK 204
>gi|242398419|ref|YP_002993843.1| Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
lyase/phosphohexuloisomerase [Thermococcus sibiricus MM
739]
gi|242264812|gb|ACS89494.1| Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
lyase/phosphohexuloisomerase [Thermococcus sibiricus MM
739]
Length = 406
Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
++ IL+ T G Q + + + + + I + V GG+ I +++AGA
Sbjct: 129 VNYILVHT---GIDEQAQGRNPLEDLEKVVKAVK---IPVAVAGGLNLETIPKVIEAGAT 182
Query: 193 LLVVGSSFFNQKGEISYAKRLNDL 216
+++VG + K + +R+ DL
Sbjct: 183 IIIVGGAITKAKDPENITRRILDL 206
>gi|45358833|ref|NP_988390.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanococcus maripaludis S2]
gi|45047699|emb|CAF30826.1| Orotidine 5'-phosphate decarboxylase [Methanococcus maripaludis S2]
Length = 438
Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ ++ G Q L + +++ K + GG+ S +AGAD+++
Sbjct: 136 VDIINIHVGLDQQVLNVDPVELVKRVSENCKK--AKIAAAGGLNSETAVKAYEAGADIII 193
Query: 196 VGSSFFNQKGEISYAKRL 213
G + + A+ +
Sbjct: 194 AGGTLYKSADPEQTARDI 211
>gi|20093841|ref|NP_613688.1| tryptophan synthase subunit alpha [Methanopyrus kandleri AV19]
gi|28380194|sp|Q8TYA2|TRPA_METKA RecName: Full=Tryptophan synthase alpha chain
gi|19886767|gb|AAM01618.1| Tryptophan synthase alpha chain [Methanopyrus kandleri AV19]
Length = 275
Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 62/155 (40%), Gaps = 18/155 (11%)
Query: 75 DSHINIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+ +++ A+AG I E S + + + P T L+ + +
Sbjct: 111 ERYLSAAAEAGVSGIIVADMPVEESDEVHSVA---RDLEIDVIYLVAPSTTDERLKKIGE 167
Query: 132 EIDMILIMTVNPGFGGQQ--LIESTIPKIRQAKALIGKRSISLEVDG-GVTSR-NIKSLV 187
+ + G G + L E T+ +R + + + + V G G++ R +++ ++
Sbjct: 168 RASGFVYVISRYGVTGARRDLSEDTLELVRWVRDHVD---VPVAV-GFGISERWHVEEVI 223
Query: 188 QAGADLLVVGSS----FFNQKGEISYAKRLNDLKK 218
AGAD +VGS+ + +R+ +L K
Sbjct: 224 AAGADGAIVGSAFIKEIHRSEDIAEAEERVRELAK 258
>gi|258542199|ref|YP_003187632.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-01]
gi|256633277|dbj|BAH99252.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-01]
gi|256636336|dbj|BAI02305.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-03]
gi|256639389|dbj|BAI05351.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-07]
gi|256642445|dbj|BAI08400.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-22]
gi|256645500|dbj|BAI11448.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-26]
gi|256648553|dbj|BAI14494.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-32]
gi|256651606|dbj|BAI17540.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654597|dbj|BAI20524.1| thiamine phosphate pyrophosphorylase [Acetobacter pasteurianus IFO
3283-12]
Length = 201
Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 35/202 (17%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + AGA+ I + D D +R+ + H + ++ + I
Sbjct: 18 VDRLGGAGARFIQLRLKD--------MEEDALRAEIRQGHAYAKQHGVCLVLNDYWQIAL 69
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
D G D I E L I G + G++ + +E+D L + N
Sbjct: 70 DEGIDYIHLGQEDLDTAD--LAAIRKGGIRLGISTHCH----------EELDRAL--SCN 115
Query: 143 PGF------GGQQLIESTIP-----KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
P + +L + K+ + + LIG ++ L GG+T + ++AGA
Sbjct: 116 PDYVALGPIWETKLKKMAFGPQGPLKLTEWRKLIG--NLPLVAIGGITLERAWACIEAGA 173
Query: 192 DLLVVGSSFFNQKGEISYAKRL 213
D + S+F Q K
Sbjct: 174 DSVSAVSAFIRQPDPEGQVKAW 195
>gi|150402441|ref|YP_001329735.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanococcus maripaludis C7]
gi|150033471|gb|ABR65584.1| Orotidine 5'-phosphate decarboxylase [Methanococcus maripaludis C7]
Length = 438
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ ++ G Q L + +++ K + GG+ S +AGAD+++
Sbjct: 136 VDIINIHVGLDQQVLNVDPVELVKRVSENCKK--AKIAAAGGLNSETAVKAYEAGADIII 193
Query: 196 VGSSFFNQKGEISYAKRL 213
G + + A+ +
Sbjct: 194 AGGTLYKSADPEQTARDI 211
>gi|332158509|ref|YP_004423788.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus sp.
NA2]
gi|331033972|gb|AEC51784.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus sp.
NA2]
Length = 406
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GG+ I +++ GA ++VVGS+ K +++ DL
Sbjct: 166 GGLNLETIPKVIELGATIVVVGSAITKAKDPEEVTRKIIDL 206
>gi|134045366|ref|YP_001096852.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanococcus maripaludis C5]
gi|132662991|gb|ABO34637.1| 3-hexulose-6-phosphate synthase [Methanococcus maripaludis C5]
Length = 438
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ ++ G Q L + +++ K + GG+ S +AGAD+++
Sbjct: 136 VDIINIHVGLDQQVLNVDPVELVKRVSENCKK--AKIAAAGGLNSETAVKAYEAGADIII 193
Query: 196 VGSSFFNQKGEISYAK-RLNDLK 217
G + + A+ + LK
Sbjct: 194 AGGTLYKSADPEQTARDIIKGLK 216
>gi|91773931|ref|YP_566623.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanococcoides burtonii DSM 6242]
gi|121686647|sp|Q12UK3|FAEHP_METBU RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|91712946|gb|ABE52873.1| Fae/hps bifunctional enzyme [Methanococcoides burtonii DSM 6242]
Length = 396
Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 49 FGADVIRSLRS-YSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRT 105
+G DVI +R D+ L + ++ADA D I + + + +
Sbjct: 212 YGVDVISKIREVRPDAFIVADLKTLDTGNLEARMVADATADAIVVSALAPIATLNKVIEE 271
Query: 106 IHAMGKKTGV-AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
H G + +N PVA+LE +D + ++ + G I KAL
Sbjct: 272 AHKTGIYAVMDTLNTPDPVAVLEQ-LDVLPDVVELHRAIDIEGTA---HAWGSIEGIKAL 327
Query: 165 IGKRS--ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
KRS + + V GGV I + AGAD+LVVG + N K A R +
Sbjct: 328 AVKRSSKVLVAVAGGVRVDTISDALGAGADILVVGRAITNSKDVRQAADRFIE 380
>gi|288932475|ref|YP_003436535.1| formaldehyde-activating enzyme [Ferroglobus placidus DSM 10642]
gi|288894723|gb|ADC66260.1| formaldehyde-activating enzyme [Ferroglobus placidus DSM 10642]
Length = 394
Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
AK + K ++ + V GG+ N++ ++ GAD++VVG + K A+R
Sbjct: 325 AKEIKKKYNVLVAVAGGIRPENVEEVISYGADIIVVGRAITKAKDVEGAARR 376
>gi|282165574|ref|YP_003357959.1| formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
[Methanocella paludicola SANAE]
gi|282157888|dbj|BAI62976.1| formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase
[Methanocella paludicola SANAE]
Length = 396
Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Query: 99 IRRSLRTIHAMGKKTGV-----AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
++ +K G+ +N + P ++E + + D++ + GQ+ E
Sbjct: 261 PLETIEKFCEEARKVGIYSIIDMLNVDNPAKVVEALKHKPDIVELH-RGIDTEGQK-AEH 318
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR- 212
I K G + + + V GGV N++ ++ GAD+LVVG + N K +
Sbjct: 319 AWGNIAGIKKAAGGKKLLVAVAGGVKVENVEVAMKGGADILVVGRAITNAKDIEGATRAF 378
Query: 213 LNDLKK 218
L + K
Sbjct: 379 LRAMHK 384
>gi|309777352|ref|ZP_07672313.1| 3-hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914893|gb|EFP60672.1| 3-hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
3_1_53]
Length = 217
Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++R+ KA++ + L GG+ I ++QAGAD++++GS+ ++ + A+R
Sbjct: 147 LEELRKIKAVV--KDAHLAAAGGINEETIADIMQAGADIVIIGSAITKKEDPVKEAERYK 204
Query: 215 DLKKS 219
K+
Sbjct: 205 RYMKA 209
>gi|297587151|ref|ZP_06945796.1| thiamine-phosphate diphosphorylase [Finegoldia magna ATCC 53516]
gi|297575132|gb|EFH93851.1| thiamine-phosphate diphosphorylase [Finegoldia magna ATCC 53516]
Length = 212
Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
CD+ H + R I K G++ + T LE D I + + P F
Sbjct: 80 CDVDGVHLGQKDMPIKYAREILGDNKIIGISCH--TLEQALEAQEAGADYIGVGAIFPTF 137
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
G + TI +++ I I + GG+ NI+ + D + + S+ F+
Sbjct: 138 TGDDFVRVTIDTLKEIAEKI---HIPITAIGGINKNNIRMIFDCNVDSVSLTSAVFSTGD 194
Query: 206 EISYAKRLND 215
+ + L
Sbjct: 195 VAASTQELKQ 204
>gi|329113368|ref|ZP_08242149.1| Thiamine-phosphate pyrophosphorylase [Acetobacter pomorum DM001]
gi|326697193|gb|EGE48853.1| Thiamine-phosphate pyrophosphorylase [Acetobacter pomorum DM001]
Length = 201
Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 13/191 (6%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + AGA+ I + D D +R+ + H + ++ + I
Sbjct: 18 VDRLGGAGARFIQLRLKD--------MDEDALRAEIRQGHAYAKQHGVCLVLNDYWQIAL 69
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
D G D I E L I G + G++ + + + + L
Sbjct: 70 DEGIDYIHLGQEDLDTAD--LAAIRKGGIRLGISTHCHEELDRALGCTPDY-VALGPIWE 126
Query: 143 PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
K+ + + LIG ++ L GG+T + ++AGAD + S+F
Sbjct: 127 TKLKKMAFGPQGPLKLTEWRKLIG--NLPLVAIGGITLERAWACIEAGADSVSAVSAFIR 184
Query: 203 QKGEISYAKRL 213
Q K
Sbjct: 185 QPDPEGQVKAW 195
>gi|296115240|ref|ZP_06833881.1| thiamine-phosphate pyrophosphorylase [Gluconacetobacter hansenii
ATCC 23769]
gi|295978341|gb|EFG85078.1| thiamine-phosphate pyrophosphorylase [Gluconacetobacter hansenii
ATCC 23769]
Length = 210
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 70/192 (36%), Gaps = 15/192 (7%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
I+ + +AGAK I + D D +R ++ H + ++ + +
Sbjct: 18 IATLGQAGAKLIQLRLKD--------MAEDALRLEIRRGVALAHLHGVCLVLNDYWRLAI 69
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+ G D I E L I G + GV+ + + DV D + + V
Sbjct: 70 EEGIDFIHLGQEDLDEAD--LPAIRRAGLRLGVSTHSHDELQRALDVRP--DYVALGPVW 125
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
P + + ++R+ K L+G + L GG+T S + AGAD + S F
Sbjct: 126 PTKLKKMPWGPQGVDRLREWKRLVG--DLPLVAIGGITLARAPSCIAAGADCVSAVSDFI 183
Query: 202 NQKGEISYAKRL 213
+ +
Sbjct: 184 RMPDPAAQVRAW 195
>gi|116754295|ref|YP_843413.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanosaeta thermophila PT]
gi|121693375|sp|A0B7U9|FAEHP_METTP RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|116665746|gb|ABK14773.1| 3-hexulose-6-phosphate synthase [Methanosaeta thermophila PT]
Length = 392
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
E I + K+L GK I + V GG+ N++ ++AGAD++VVG + K +
Sbjct: 315 EHAWQSIPEIKSLGGK--ILVAVAGGIRVDNVRDALRAGADIIVVGRAITRSKDVRDMTE 372
Query: 212 R-LNDLKKSAL 221
+ L+ LKKS +
Sbjct: 373 QFLSQLKKSEI 383
>gi|189218382|ref|YP_001939023.1| thiamine monophosphate synthase [Methylacidiphilum infernorum V4]
gi|189185240|gb|ACD82425.1| Thiamine monophosphate synthase [Methylacidiphilum infernorum V4]
Length = 221
Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ + I + K I K + GG+ NI ++ AGAD +V+ S+ +
Sbjct: 150 YLPLGLEAIPRVKQQIKKPVFFI---GGINQENIHEVLDAGADRVVMVSALLKAADIPLF 206
Query: 210 AKRLNDL 216
+++ +L
Sbjct: 207 CRQMKNL 213
>gi|240103948|ref|YP_002960257.1| 3-hexulose-6-phosphate synthase-6-phospho 3-hexuloisomerase fused
bifuntional enzyme (hps) [Thermococcus gammatolerans
EJ3]
gi|239911502|gb|ACS34393.1| 3-hexulose-6-phosphate synthase-6-phospho 3-hexuloisomerase fused
bifuntional enzyme (hps) [Thermococcus gammatolerans
EJ3]
Length = 406
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ + V GG+ I +++ GA +++VGS+ K +++ DL
Sbjct: 159 NVPVAVAGGLNLETIPKVIELGATIIIVGSAITKAKDPEKVTRQIIDL 206
>gi|91774606|ref|YP_544362.1| hexulose-6-phosphate synthase [Methylobacillus flagellatus KT]
gi|91708593|gb|ABE48521.1| 3-hexulose-6-phosphate synthase [Methylobacillus flagellatus KT]
Length = 228
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 71/172 (41%), Gaps = 8/172 (4%)
Query: 35 HFDVMDGCFVPNISF-GADVIRSLR-SYSDSVFDCHLMISSIDSH-INIIADAGCDIITF 91
H D+++ P I + G ++ +LR + ++ L + AG DI+T
Sbjct: 28 HVDILE-IGTPCIKYNGIKLLETLRAKFPNNKILVDLKTMDAGFYEAEPFYKAGADIVTV 86
Query: 92 HPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
+ I+ + + GKK V + T A + ++ I+ V+ G Q
Sbjct: 87 LGTADIGTIKGVIDVANKYGKKAQVDLINVTDKAARTKEVAKLG-AHIIGVHTGLDQQAA 145
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
++ + +L + + V GGV + K +V AGA ++V G++ +
Sbjct: 146 GQTPFADLNLVSSL--NLGVDISVAGGVKATTAKQVVDAGATIVVAGAAIYG 195
>gi|116672250|ref|YP_833183.1| hexulose-6-phosphate synthase [Arthrobacter sp. FB24]
gi|116612359|gb|ABK05083.1| 3-hexulose-6-phosphate synthase [Arthrobacter sp. FB24]
Length = 207
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V GGV I+++ +AGAD+ VVG S ++ + AK+L
Sbjct: 163 VAGGVNLSTIEAVQRAGADVAVVGGSIYSAEDPALAAKQLRA 204
>gi|225572932|ref|ZP_03781687.1| hypothetical protein RUMHYD_01123 [Blautia hydrogenotrophica DSM
10507]
gi|225039716|gb|EEG49962.1| hypothetical protein RUMHYD_01123 [Blautia hydrogenotrophica DSM
10507]
Length = 166
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
RQA + +++ GG+ + N + +QAGA ++V S F G+ISY + L L+K
Sbjct: 78 RQAVKALNTYPGGMQIGGGINAENAEEFLQAGASHVIVTSYVFK-DGKISY-ENLEKLRK 135
Query: 219 SALA 222
+ A
Sbjct: 136 AVGA 139
>gi|57640410|ref|YP_182888.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
lyase/phosphohexuloisomerase [Thermococcus kodakarensis
KOD1]
gi|57158734|dbj|BAD84664.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
lyase/phosphohexuloisomerase [Thermococcus kodakarensis
KOD1]
Length = 406
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GG+ I +++ GA +++VGS+ K +R+ DL
Sbjct: 166 GGLNLDTIPKVIELGATIIIVGSAITKAKDPEEVTRRIIDL 206
>gi|78356424|ref|YP_387873.1| thiamine-phosphate pyrophosphorylase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78218829|gb|ABB38178.1| thiamine-phosphate diphosphorylase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 215
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL---K 217
+ L + S+ L GG+ N + +AGAD + V S+ A L + K
Sbjct: 149 LRGLRRRFSLPLVAIGGIGPDNAAEVFEAGADGIAVVSAICASPDPQQAAATLRAVARGK 208
Query: 218 KSALAI 223
+ A A+
Sbjct: 209 RRAAAV 214
>gi|14521911|ref|NP_127388.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus
abyssi GE5]
gi|5459131|emb|CAB50617.1| hps D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus
abyssi GE5]
Length = 406
Score = 49.8 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GG+ I +++ GA +++VGS+ K + +++ DL
Sbjct: 166 GGLNLETIPKVIELGATIIIVGSAITKAKDPEAVTRKIIDL 206
>gi|254172810|ref|ZP_04879484.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
lyase/phosphohexuloisomerase [Thermococcus sp. AM4]
gi|214032966|gb|EEB73794.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
lyase/phosphohexuloisomerase [Thermococcus sp. AM4]
Length = 406
Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
S+ + V GG+ I +++ GA +++VGS+ K +++ DL
Sbjct: 159 SVPVAVAGGLNLETIPKVIELGATIIIVGSAITKAKDPEKVTRQIIDL 206
>gi|14591680|ref|NP_143767.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus
horikoshii OT3]
gi|3258382|dbj|BAA31065.1| 406aa long hypothetical D-arabino 3-hexulose 6-phosphate
formaldehyde lyase [Pyrococcus horikoshii OT3]
Length = 406
Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + V+ G Q ++ + + + + I + V GG+ I +++ GA +++
Sbjct: 129 VHYILVHTGIDEQAQGKTPLEDLEKVVKAVK---IPVAVAGGLNLETIPKVIELGATIVI 185
Query: 196 VGSSFFNQKGEISYAKRLNDL 216
VGS+ K +++ DL
Sbjct: 186 VGSAITKSKDPEGVTRKIIDL 206
>gi|23094402|emb|CAD28138.1| putative 3-hexulose-6-phosphate synthase [Rhodococcus opacus]
Length = 200
Score = 49.4 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
V GGV I ++ AGAD+ V G + ++ + + A
Sbjct: 164 VAGGVKVDTIAAVRDAGADVAVAGGAIYSAEDPAAAA 200
>gi|313616815|gb|EFR89522.1| ribulose-phosphate 3-epimerase family protein [Listeria innocua FSL
S4-378]
Length = 65
Score = 49.0 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVG-SSFFNQKGEISYAKRL 213
+EVDG + + + D+ V+G S+ F+ + + SYA+RL
Sbjct: 12 IEVDGNINKETVGLMRDCLPDIYVLGTSALFHDRDKTSYAERL 54
>gi|88607335|ref|YP_504653.1| nicotinate-nucleotide pyrophosphorylase [Anaplasma phagocytophilum
HZ]
gi|88598398|gb|ABD43868.1| nicotinate-nucleotide pyrophosphorylase [Anaplasma phagocytophilum
HZ]
Length = 275
Score = 49.0 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 60/159 (37%), Gaps = 17/159 (10%)
Query: 42 CFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITF---HPESSPH 98
FV I +IRS R + L + D + H S
Sbjct: 112 QFVEIIHGTNAIIRSTRKTCPGLRKFDLYAVHVGG-GESFRTGLFDGVLIKDNHIASCSG 170
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
I + + A + + +T + E +++ +D +++ ++ I
Sbjct: 171 ISECVHKVRAKLGNVVILVECDTTEQVEESILNNVDTVML------------DNMSLDNI 218
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+++ +++ R+ +EV GG+ N++ + + G D + VG
Sbjct: 219 KKSVSIVNSRA-KIEVSGGINLNNVRPIAECGVDYISVG 256
>gi|319778594|ref|YP_004129507.1| Thiamin-phosphate pyrophosphorylase [Taylorella equigenitalis MCE9]
gi|317108618|gb|ADU91364.1| Thiamin-phosphate pyrophosphorylase [Taylorella equigenitalis MCE9]
Length = 209
Score = 49.0 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ IR+A+ L + GG+T N +++AGAD+L V S F ++ + K N
Sbjct: 149 LDLIRRARKLFPVTP--IVCIGGITLDNAPYVIEAGADMLAVISGLFEKEDIATTIKEFN 206
Query: 215 DL 216
L
Sbjct: 207 KL 208
>gi|238761168|ref|ZP_04622145.1| hypothetical protein ykris0001_35190 [Yersinia kristensenii ATCC
33638]
gi|238761421|ref|ZP_04622397.1| hypothetical protein ykris0001_21600 [Yersinia kristensenii ATCC
33638]
gi|238700395|gb|EEP93136.1| hypothetical protein ykris0001_21600 [Yersinia kristensenii ATCC
33638]
gi|238700648|gb|EEP93388.1| hypothetical protein ykris0001_35190 [Yersinia kristensenii ATCC
33638]
Length = 279
Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG-------------KKTGVAINPET 121
+ I +IA +G D + H S ++ + H G G+A
Sbjct: 122 EQDILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPA 181
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
VA + ++E +DMI +MT G G I I ++ AL+G S+ +GG+
Sbjct: 182 DVAEVAKKMEELGVDMIGLMTGMSYEGVGAGDIPDVIK--QRLLALVGAVSVPTLAEGGI 239
Query: 179 TSRNIKSLVQAGADLLVVGSSF 200
N K+ G ++LVVG++
Sbjct: 240 NLENAKAFKDTGVNILVVGTAI 261
>gi|288932352|ref|YP_003436412.1| tryptophan synthase, subunit alpha [Ferroglobus placidus DSM 10642]
gi|288894600|gb|ADC66137.1| tryptophan synthase, alpha subunit [Ferroglobus placidus DSM 10642]
Length = 251
Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 21/181 (11%)
Query: 53 VIRSLRSYSDSVFDCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTI 106
V+ R +S + + ++ I +G D + + +
Sbjct: 71 VVEEFREHSSKPV-VLMTYYNPVYRFGAENFIAEAKKSGVDGLIVVDLPIEEAKEYVEIC 129
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ--LIESTIPKIRQAKAL 164
+ T P TP L+ + + + + G G + + ES + +AK +
Sbjct: 130 RKLEIGTIFLAAPNTPDERLKMIDEASSAFVYLISLYGTTGSRSEIPESAFSLLSRAKRI 189
Query: 165 IGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSF------FNQKGEISYAKRLNDL 216
K + V G GV+ + ++K+LV+AGAD +VVGS+ F + +++ +L
Sbjct: 190 CRKP---VAV-GFGVSKAEHVKTLVEAGADGVVVGSAIVEIVEKFGENASEEIERKVREL 245
Query: 217 K 217
+
Sbjct: 246 R 246
>gi|7649308|gb|AAF65844.1|AF255725_1 ribulose-5-phosphate-3-epimerase [Pisum sativum]
Length = 54
Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 69 LMISSIDSHINIIADAGCDIITFHPE--SSPHIRRSLRTIHAMGKKTGVAINPE 120
LMI D + AG DII+ H E S+ H+ R++ + ++G K GV +NP
Sbjct: 1 LMIVEPDQRVPDFIKAGADIISVHCEQSSTIHLHRAVNQVKSLGSKAGVVLNPG 54
>gi|300115034|ref|YP_003761609.1| thiamine-phosphate pyrophosphorylase [Nitrosococcus watsonii C-113]
gi|299540971|gb|ADJ29288.1| thiamine-phosphate pyrophosphorylase [Nitrosococcus watsonii C-113]
Length = 217
Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYA 210
E + + ++ + GG+T N +++AGA + V+G F + + A
Sbjct: 141 EPVWASLALLREARKSLNLPIVAIGGITPENAPQVIEAGASAVAVIG-GLFRSQDIRATA 199
Query: 211 KRLNDL 216
L
Sbjct: 200 AAYQQL 205
>gi|147919214|ref|YP_687051.1| thiamine-phosphate pyrophosphorylase [uncultured methanogenic
archaeon RC-I]
gi|121685278|sp|Q0W1L8|THIE_UNCMA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|110622447|emb|CAJ37725.1| thiamine-phosphate pyrophosphorylase [uncultured methanogenic
archaeon RC-I]
Length = 212
Score = 48.6 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + + SI + GG+ + N ++ AGAD L V S+ +Q+ + A+ L +
Sbjct: 147 LREVRRRVSIPVVAIGGINAANAPEVLAAGADGLAVISAVVSQEDVTAAARNLKAI 202
>gi|11498903|ref|NP_070134.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Archaeoglobus fulgidus DSM 4304]
gi|74512837|sp|O28964|FAEHP_ARCFU RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|2649276|gb|AAB89943.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-2)
[Archaeoglobus fulgidus DSM 4304]
Length = 394
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ K S+ + V GG+ N++ ++ AGAD++VVG + + ++
Sbjct: 327 KIKEKFSVLVAVAGGIRPENVEEVIAAGADIIVVGRAVTKARDVEGAVRK 376
>gi|313201294|ref|YP_004039952.1| 3-hexulose-6-phosphate synthase [Methylovorus sp. MP688]
gi|312440610|gb|ADQ84716.1| 3-hexulose-6-phosphate synthase [Methylovorus sp. MP688]
Length = 209
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + V GGV + +K + AGA ++V G++ + + A + L
Sbjct: 160 GVKISVAGGVKAATVKQVKDAGATIIVAGAAIYGAADPAASAAEITSLA 208
>gi|303243673|ref|ZP_07330014.1| tryptophan synthase, alpha subunit [Methanothermococcus okinawensis
IH1]
gi|302485915|gb|EFL48838.1| tryptophan synthase, alpha subunit [Methanothermococcus okinawensis
IH1]
Length = 254
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 66/180 (36%), Gaps = 14/180 (7%)
Query: 51 ADVIRSLRSYSDSVFDC-----HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT 105
D+I+ R S++ + +++ I + +AG + + L
Sbjct: 67 FDIIKEFRKTSNTPVVVMTYYNPVYTMGVENFIKTLKEAGGNGLIVVDLPVEDAEEYLNI 126
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPKIRQAKA 163
T P T L+ + + M + + G G + + + + + K
Sbjct: 127 CKKYDIGTVFLAAPNTSKDRLKKIDEASSMFVYLVSVYGTTGAREDVSNLALDFLNRTKN 186
Query: 164 LIGKRSISLEVDG-GVTS-RNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLNDLKKSA 220
L K G G++ + K +++GAD +VVGS++ + + + L++ A
Sbjct: 187 LCKKPVYV----GFGISKKEHAKEFIKSGADGVVVGSAYVKIIEEYGDSDETVKKLEEKA 242
>gi|159905786|ref|YP_001549448.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanococcus maripaludis C6]
gi|159887279|gb|ABX02216.1| Orotidine 5'-phosphate decarboxylase [Methanococcus maripaludis C6]
Length = 438
Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ ++ G Q L + +++ + + GG+ S +AGAD+++
Sbjct: 136 VDIINIHVGLDQQVLNVDPVELVKKVSENC--KIAKIAAAGGLNSETAVKAYEAGADIII 193
Query: 196 VGSSFFNQKGEISYAKRL 213
G + + A+ +
Sbjct: 194 AGGTLYKSADPEQTARDI 211
>gi|218281469|ref|ZP_03487912.1| hypothetical protein EUBIFOR_00477 [Eubacterium biforme DSM 3989]
gi|218217391|gb|EEC90929.1| hypothetical protein EUBIFOR_00477 [Eubacterium biforme DSM 3989]
Length = 222
Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Query: 78 INIIADAGCDIITF----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+ +AG DI T H E+ I+ +R+ GKK V + + + ID++
Sbjct: 84 ADKCFEAGADICTVLGVSHDET---IQGVVRSAKKYGKKVMVDMIAVPDLKKRTEEIDQM 140
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
+ + V+ F Q+L + + ++ ++I ++ V GGV + ++V GA++
Sbjct: 141 G-VDYICVHTAFDVQKLGQDPLNDLKTVNSVI--KNAKSAVAGGVKLETVDAIVNEGAEI 197
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
+VVG + N K +YAK +
Sbjct: 198 IVVGGAICNAKDRQAYAKEIKS 219
>gi|332159014|ref|YP_004424293.1| orotidine 5'-phosphate decarboxylase [Pyrococcus sp. NA2]
gi|331034477|gb|AEC52289.1| orotidine 5'-phosphate decarboxylase [Pyrococcus sp. NA2]
Length = 208
Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 7/137 (5%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+ +AG D I HP +++ + + ++ LE + D +
Sbjct: 71 AKKVFEAGADYIIVHPFVGKDSVNAVKELGEIIMVVEMS-----HPGALEFINPLTDKFI 125
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVV 196
M G + +IR + + SI + G G + ++AGAD ++V
Sbjct: 126 EMANQIKPFGVIAPGTRPERIRYIRERLND-SIKILAPGIGAQGGKARDAIEAGADYIIV 184
Query: 197 GSSFFNQKGEISYAKRL 213
G + +N + A+R+
Sbjct: 185 GRAIYNAENPKEVARRI 201
>gi|57640193|ref|YP_182671.1| tryptophan synthase subunit alpha [Thermococcus kodakarensis KOD1]
gi|7674396|sp|Q9YGA9|TRPA_PYRKO RecName: Full=Tryptophan synthase alpha chain
gi|5545310|dbj|BAA82551.1| alpha subunit of tryptophan synthase [Thermococcus kodakaraensis]
gi|57158517|dbj|BAD84447.1| tryptophan synthase, alpha subunit [Thermococcus kodakarensis KOD1]
Length = 251
Score = 48.2 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 17/173 (9%)
Query: 53 VIRSLRSYSDSVFDCHLMISSIDS-----HINIIADAGCDIITFHPESSPHIRRSLRTIH 107
++R R +S + + + + +G D I H L
Sbjct: 71 ILREFRRHSSTPVILMTYYNPVFRTGVKKFLGEAKASGADGILVVDLPVSHAGEFLDAAK 130
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI--ESTIPKIRQAKALI 165
G KT P TP L ++ + + G G + E+ +R+A+ +
Sbjct: 131 EEGLKTVFLAAPNTPDERLREIDKASTGFVYLISLYGTTGARDRLPETAFEFVRRARKIC 190
Query: 166 GKRSISLEVDG-GVTS-RNIKSLVQAGADLLVVGSSFF----NQKGEISYAKR 212
+ L V G GV+ ++ L++AGAD +VVGS+ + + +R
Sbjct: 191 NNK---LAV-GFGVSRREQVEELLKAGADGVVVGSALIELISRSENPVEELRR 239
>gi|150399334|ref|YP_001323101.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanococcus vannielii SB]
gi|150012037|gb|ABR54489.1| Orotidine 5'-phosphate decarboxylase [Methanococcus vannielii SB]
Length = 437
Score = 48.2 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 4/137 (2%)
Query: 78 INIIADAGCDIITF-HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
+ + A AG D+I I+ ++ G G + ++++ +
Sbjct: 77 VEMAAKAGADVILILGVGPDSMIKEAVLAGKKYGVLVGTDLIATYDPVERAYELEKLG-V 135
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
I+ ++ G Q L + +++ + + GG+ S +AGAD+++V
Sbjct: 136 DIINIHVGLDQQVLNIDPVELVKKVSERC--KHAKIAAAGGLNSETAVKAYEAGADIIIV 193
Query: 197 GSSFFNQKGEISYAKRL 213
G + + A+ +
Sbjct: 194 GGPLYKSESPEKTARDI 210
>gi|207111373|ref|ZP_03245535.1| ribulose-phosphate 3-epimerase [Helicobacter pylori HPKX_438_CA4C1]
Length = 52
Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPET 121
M+ + + II II+ H E+ H R L+ I G G+ +NP T
Sbjct: 1 MVENASFFVGIIRSLKPQIISIHAENEKHPHRVLQLIKNSGITPGIVLNPHT 52
>gi|332161233|ref|YP_004297810.1| hypothetical protein YE105_C1611 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318605129|emb|CBY26627.1| hypothetical protein Y11_15541 [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665463|gb|ADZ42107.1| hypothetical protein YE105_C1611 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 266
Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG-------------KKTGVAINPET 121
+ I +IA +G D + H S ++ + H G G+A
Sbjct: 109 EQDILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPA 168
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
VA + ++E +DMI +MT G G I I ++ AL+G S+ +GG+
Sbjct: 169 EVAEVAKKMEELGVDMIGLMTGMSYEGVGAGDIPDVIK--QRLLALVGAVSVPTLAEGGI 226
Query: 179 TSRNIKSLVQAGADLLVVGSSF 200
N K+ G ++LVVG++
Sbjct: 227 NLENAKAFKNTGVNILVVGTAI 248
>gi|330860656|emb|CBX70951.1| unknown protein [Yersinia enterocolitica W22703]
Length = 279
Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG-------------KKTGVAINPET 121
+ I +IA +G D + H S ++ + H G G+A
Sbjct: 122 EQDILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPA 181
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
VA + ++E +DMI +MT G G I I ++ AL+G S+ +GG+
Sbjct: 182 EVAEVAKKMEELGVDMIGLMTGMSYEGVGAGDIPDVIK--QRLLALVGAVSVPTLAEGGI 239
Query: 179 TSRNIKSLVQAGADLLVVGSSF 200
N K+ G ++LVVG++
Sbjct: 240 NLENAKAFKNTGVNILVVGTAI 261
>gi|150399081|ref|YP_001322848.1| tryptophan synthase subunit alpha [Methanococcus vannielii SB]
gi|166200556|sp|A6UP14|TRPA_METVS RecName: Full=Tryptophan synthase alpha chain
gi|150011784|gb|ABR54236.1| tryptophan synthase, alpha subunit [Methanococcus vannielii SB]
Length = 259
Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 21/187 (11%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMIS-SI------DSHINIIADAGCDIITFHPESSPHI 99
I+ ++++ R S++ LM + ++ + +AG + +
Sbjct: 64 IAKSFEILKEFRKESNTP--VILMTYYNPVYNRGIENFVTQAKEAGANGLIIVDLPLQEA 121
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPK 157
+ T P TP L+ + L + G G + + T
Sbjct: 122 TEYRKICKKHEMGTVFLSAPNTPEERLKMSDEASTEFLYLISTFGITGARESFEQMTFDF 181
Query: 158 IRQAKALIGKRSISLEVDG-GVTSRN-IKSLVQAGADLLVVGSSFFN----QKGEISYAK 211
I++A+ + V G G++ +SL++ GAD ++VGS+F +
Sbjct: 182 IKRARKTCK---GKICV-GFGISKGTHAESLIEQGADGVIVGSAFVDIIKTYGDSNEAIT 237
Query: 212 RLNDLKK 218
+L +L K
Sbjct: 238 KLEELAK 244
>gi|213417990|ref|ZP_03351070.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 47
Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNI 47
M + + PS+ +AD R E ++ + A +H D+ D F+ NI
Sbjct: 1 MKVPMILHPSLASADPLRYAEALTALHDAPLGSLHLDIEDTSFINNI 47
>gi|284162161|ref|YP_003400784.1| formaldehyde-activating enzyme [Archaeoglobus profundus DSM 5631]
gi|284012158|gb|ADB58111.1| formaldehyde-activating enzyme [Archaeoglobus profundus DSM 5631]
Length = 393
Score = 48.2 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKK 218
AK + K ++ + V GG+ N++ ++ AGAD+LVVG + + +R L+ LKK
Sbjct: 323 AKPVKEKFNVLVAVAGGIRVENVQEVISAGADILVVGRAITRARDVEGAVRRFLSALKK 381
>gi|3043366|sp|Q48907|HPS_METAM RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|2104220|dbj|BAA19967.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Methylomonas
aminofaciens]
gi|5706381|dbj|BAA83096.1| 3-hexulose-6-phosphate synthase [Methylomonas aminofaciens]
gi|1588275|prf||2208290A 3-hexulose-6-phosphate synthase
Length = 209
Score = 48.2 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + V GGV + + AGA ++V G++ + + A + L K
Sbjct: 160 GLEVSVAGGVKPATVAQVKDAGATIIVAGAAIYGAADPAAAAAEITGLAK 209
>gi|169334398|ref|ZP_02861591.1| hypothetical protein ANASTE_00798 [Anaerofustis stercorihominis DSM
17244]
gi|169259115|gb|EDS73081.1| hypothetical protein ANASTE_00798 [Anaerofustis stercorihominis DSM
17244]
Length = 209
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 83 DAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV 141
DAG DI+T + I SL+ + GK+ V + +++I + + V
Sbjct: 76 DAGADIVTVLAAADNQTIEDSLKAVKEAGKELLVDLICVHDFEERVSYLEKIG-VDYICV 134
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ G Q+L + + + K L+ ++ + V GGV +KS+ D+++VG +
Sbjct: 135 HTGSDTQKLGANPLKDLITVKKLV--KNTKVSVAGGVKVDTVKSISDENPDVIIVGGGLY 192
Query: 202 NQKGEISYAKRLNDLKK 218
N + AK++ D+ K
Sbjct: 193 NAENPAETAKKMVDIIK 209
>gi|150402171|ref|YP_001329465.1| tryptophan synthase subunit alpha [Methanococcus maripaludis C7]
gi|166200554|sp|A6VFT8|TRPA_METM7 RecName: Full=Tryptophan synthase alpha chain
gi|150033201|gb|ABR65314.1| tryptophan synthase, alpha subunit [Methanococcus maripaludis C7]
Length = 259
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 68/187 (36%), Gaps = 21/187 (11%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMIS-SI------DSHINIIADAGCDIITFHPESSPHI 99
I+ +V++ R SD+ LM + ++ + +AG + +
Sbjct: 64 IAKSFEVLKEFRKESDTP--VILMTYYNPVFKRGIETFVMQAKEAGANGLIIVDLPLQEA 121
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPK 157
T P TP L+ + L + G G + + T
Sbjct: 122 TEYREICKKHEMGTVFLAAPNTPEERLKISDEASTEFLYLISTFGITGARESFEQMTFDF 181
Query: 158 IRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFF----NQKGEISYAK 211
I++A+ + V G G++ + +SL++ GAD ++VGS+F N
Sbjct: 182 IKRARTTCK---GKICV-GFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSEEALV 237
Query: 212 RLNDLKK 218
+L +L K
Sbjct: 238 KLEELAK 244
>gi|294892015|ref|XP_002773852.1| 4-methyl-5-beta-hydroxyethylthiazole kinase, putative [Perkinsus
marinus ATCC 50983]
gi|239879056|gb|EER05668.1| 4-methyl-5-beta-hydroxyethylthiazole kinase, putative [Perkinsus
marinus ATCC 50983]
Length = 494
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 24/194 (12%)
Query: 17 SRLGEEISNITKAGAKQIHF---DVMDGCFVPNISFGADVIRSLRSYSD--SVFDCHLMI 71
L +++ GA + DV G +V + + L+I
Sbjct: 18 LELPRMVASAVAGGATCVQLRLKDVSTGDYV-----------RMAKETKRLMPRHVPLII 66
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
D +++ +G D H + + R+I K GV+ V + + D
Sbjct: 67 ---DDRVDVCMASGADG--VHVGDTDMTVKDARSIIGPNKILGVST-YGRRVDAIAAIED 120
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG--KRSISLEVDGGVTSRNIKSLVQA 189
D I V P + + +I K + +++ + GG++ VQ
Sbjct: 121 GADYIATGAVYPTVTKPGAVPKGLDQIDVLKEALKTTGKTLPIVAIGGISPVTAIDCVQR 180
Query: 190 GADLLVVGSSFFNQ 203
GAD + S F+
Sbjct: 181 GADGVCAVSQIFDS 194
>gi|124486269|ref|YP_001030885.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanocorpusculum labreanum Z]
gi|124363810|gb|ABN07618.1| hexulose-6-phosphate synthase [Methanocorpusculum labreanum Z]
Length = 427
Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+G + + V GG+ + GAD+++VG S A+ + D
Sbjct: 155 DKLGDLPLEIAVAGGLNAETASKAAARGADIVIVGGSIIKAADVTKAARNVRD 207
>gi|2622589|gb|AAB85949.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase related protein
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 430
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
IR+ K ++G R + + V GG+T ++ + +GAD++VVG + A+
Sbjct: 355 IREIKEILGPRGL-VAVAGGITPSKMQEALDSGADIIVVGRYIIGSRDVRRAAE 407
>gi|212223482|ref|YP_002306718.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
lyase/phosphohexuloisomerase [Thermococcus onnurineus
NA1]
gi|212008439|gb|ACJ15821.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
lyase/phosphohexuloisomerase [Thermococcus onnurineus
NA1]
Length = 406
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
S+ + V GG+ I +++ GA +++VG + K +++ DL
Sbjct: 159 SVPVAVAGGLNLETIPKVIELGATIIIVGGAITKAKDPEDVTRKIIDL 206
>gi|111017511|ref|YP_700483.1| 3-hexulose-6-phosphate synthase [Rhodococcus jostii RHA1]
gi|110817041|gb|ABG92325.1| probable 3-hexulose-6-phosphate synthase [Rhodococcus jostii RHA1]
Length = 206
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
V GGV I ++ AGAD+ V G + ++ +
Sbjct: 164 VAGGVKVDTIAAVRDAGADVAVAGGAIYSAEDPP 197
>gi|147920721|ref|YP_685475.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [uncultured methanogenic archaeon RC-I]
gi|121690520|sp|Q0W644|FAEHP_UNCMA RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|110620871|emb|CAJ36149.1| formaldehyde activating hexulose-6-phosphate synthase [uncultured
methanogenic archaeon RC-I]
Length = 396
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
E I + K G + + + V GGV N+++ ++ GAD+LVVG S N K ++
Sbjct: 317 EHAWGNIPEIKKAAGGKKLLVAVAGGVKVENVETALKGGADILVVGRSITNAKDIEGESR 376
Query: 212 R-LNDLKK 218
R L +KK
Sbjct: 377 RFLQAMKK 384
>gi|14521295|ref|NP_126770.1| thiamine-phosphate pyrophosphorylase [Pyrococcus abyssi GE5]
gi|13633984|sp|Q9UZQ5|THIE_PYRAB RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|5458513|emb|CAB50001.1| thiE thiamine phosphate pyrophosphorylase [Pyrococcus abyssi GE5]
Length = 207
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+I + ++ SI + GG+ N+K ++ AG D + V S+ + L +
Sbjct: 142 RIEGLREIVEAVSIPVVAIGGINVENVKQVLSAGVDGIAVVSAVMGASDVKKATEELRKI 201
Query: 217 KKSAL 221
+ L
Sbjct: 202 IEEVL 206
>gi|191637267|ref|YP_001986433.1| Putative 3-hexulose-6-phosphate synthase [Lactobacillus casei BL23]
gi|227533173|ref|ZP_03963222.1| 3-hexulose-6-phosphate synthase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239629427|ref|ZP_04672458.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301065531|ref|YP_003787554.1| putative hexulose 6 phosphate synthase [Lactobacillus casei str.
Zhang]
gi|190711569|emb|CAQ65575.1| Putative 3-hexulose-6-phosphate synthase [Lactobacillus casei BL23]
gi|227189187|gb|EEI69254.1| 3-hexulose-6-phosphate synthase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239528113|gb|EEQ67114.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300437938|gb|ADK17704.1| putative hexulose 6 phosphate synthase [Lactobacillus casei str.
Zhang]
gi|327381307|gb|AEA52783.1| Hexulose-6-phosphate synthase [Lactobacillus casei LC2W]
gi|327384478|gb|AEA55952.1| Hexulose-6-phosphate synthase [Lactobacillus casei BD-II]
Length = 215
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
I+ L GK+ V + ++++ + ++V+ G Q + ++ + +
Sbjct: 92 IKACLAAAKKYGKQVFVDTICVPDLNTRIKELEDVG-VDSISVHVGVDEQAVGQTPLNAL 150
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+Q K L +S V GG+ + GAD+++VG + ++ AK L D
Sbjct: 151 KQVKQLSKHSQLS--VAGGIKVSTVDQYQALGADIIIVGGGVNHADDPVATAKALAD 205
>gi|161484927|ref|NP_276588.2| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanothermobacter thermautotrophicus str.
Delta H]
gi|97049518|sp|O27518|FAEHP_METTH RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
Length = 406
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
IR+ K ++G R + + V GG+T ++ + +GAD++VVG + A+
Sbjct: 331 IREIKEILGPRGL-VAVAGGITPSKMQEALDSGADIIVVGRYIIGSRDVRRAAE 383
>gi|330994274|ref|ZP_08318202.1| Thiamine-phosphate pyrophosphorylase [Gluconacetobacter sp. SXCC-1]
gi|329758741|gb|EGG75257.1| Thiamine-phosphate pyrophosphorylase [Gluconacetobacter sp. SXCC-1]
Length = 206
Score = 47.5 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 65/192 (33%), Gaps = 15/192 (7%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
++ + +AGA+ I + D + + H + ++ + I
Sbjct: 19 VARLGQAGARLIQLRLKD--------MADEALHHEIREGIRQARAHGVTLVLNDYWRIAI 70
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
G D I E L I A G + GV+ + ++ + V D + + V
Sbjct: 71 AEGVDYIHLGQEDLDTAD--LSAIRAAGIRLGVSTHSDSELERALSVAP--DYVALGPVW 126
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
P + K+ + K IG +I L GG+T + AGAD + S F
Sbjct: 127 PTKLKKMPWAPQGTGKLTRWKQRIG--TIPLVAIGGITLERAPLCLAAGADCVSAVSDFI 184
Query: 202 NQKGEISYAKRL 213
+ K
Sbjct: 185 RMPDPQAQVKAW 196
>gi|82703741|ref|YP_413307.1| thiamine-phosphate pyrophosphorylase [Nitrosospira multiformis ATCC
25196]
gi|123543832|sp|Q2Y5Q6|THIE_NITMU RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|82411806|gb|ABB75915.1| thiamine-phosphate diphosphorylase [Nitrosospira multiformis ATCC
25196]
Length = 234
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + + I + GG+ S N L+ AGAD + V ++ F + S A + + L
Sbjct: 161 IDLLRQGNLEIRIPIVAIGGINSDNALELISAGADAVAVSNALFGARDIRSEAAKFSGLF 220
Query: 218 K 218
K
Sbjct: 221 K 221
>gi|73663457|ref|YP_302238.1| hexulose-6-phosphate synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119370764|sp|Q49VB7|HPS3_STAS1 RecName: Full=3-hexulose-6-phosphate synthase 3; Short=HPS 3;
AltName: Full=D-arabino-3-hexulose-6-phosphate
formaldehyde lyase 3
gi|72495972|dbj|BAE19293.1| putative hexulose-6-phosphate synthase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 210
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q ES + +RQ K++I + + V GG+ IK +V DL+VVG
Sbjct: 131 IAVHTGYDLQAEGESPLESLRQVKSVI--NNSKVAVIGGIKPDTIKEVVAEEPDLVVVGG 188
Query: 199 SFFNQKGEISYAKRLND 215
N ++ AK D
Sbjct: 189 GIANADDPVAAAKACKD 205
>gi|21229337|ref|NP_635259.1| thiamine-phosphate pyrophosphorylase [Methanosarcina mazei Go1]
gi|24212478|sp|Q8PS49|THIE_METMA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|20907921|gb|AAM32931.1| Thiamin-phosphate pyrophosphorylase [Methanosarcina mazei Go1]
Length = 240
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF----G 146
H + R I K G+ ++ +E D + + ++ F
Sbjct: 108 VHIGQDDMPIETARKILGANKIIGLTVHNAD--EAIEAEKSGADYVGLGSIFDTFTKKDA 165
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
G+ + ++ IR+ + I IS+ GG+ N +S+++ GAD LV S+
Sbjct: 166 GKGIGPAS---IREVRNAIK---ISVVAIGGINKENCRSVIENGADSLVAISAVVCSDDV 219
Query: 207 I----SYAKRLNDLK 217
+ + ++K
Sbjct: 220 KKETREFIDIIREIK 234
>gi|295114714|emb|CBL35561.1| thiamine-phosphate diphosphorylase [butyrate-producing bacterium
SM4/1]
Length = 208
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDL 216
+ + + SI + GG+ N+ L G D + VV S+ F + A+ L L
Sbjct: 142 VDALREIRNSVSIPIVAIGGIQPSNLMELAGTGVDGVAVV-SAIFAAERPGEAAENLRKL 200
Query: 217 KK 218
+
Sbjct: 201 AE 202
>gi|327401291|ref|YP_004342130.1| Bifunctional enzyme fae/hps [Archaeoglobus veneficus SNP6]
gi|327316799|gb|AEA47415.1| Bifunctional enzyme fae/hps [Archaeoglobus veneficus SNP6]
Length = 397
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
AK + K ++ + V GG+ N+ + AGAD+LVVG + + A+R
Sbjct: 327 YAKEVKEKFNVLVGVAGGLRPENMGEAIAAGADILVVGRAITRARDIEGAARR 379
>gi|258515510|ref|YP_003191732.1| nicotinate phosphoribosyltransferase [Desulfotomaculum acetoxidans
DSM 771]
gi|257779215|gb|ACV63109.1| Quinolinate phosphoribosyl transferase [Desulfotomaculum
acetoxidans DSM 771]
Length = 347
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 158 IRQAKALIGKRSI---SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+R+ +A + + + V GGV + LV+AGAD VGS + I +
Sbjct: 263 VREIRARLDQAGYPQVKILVSGGVNPERLPGLVEAGADAFGVGSYI-SNALPIDMTMDIK 321
Query: 215 DL 216
++
Sbjct: 322 EI 323
>gi|292493728|ref|YP_003529167.1| thiamine-phosphate pyrophosphorylase [Nitrosococcus halophilus Nc4]
gi|291582323|gb|ADE16780.1| thiamine-phosphate pyrophosphorylase [Nitrosococcus halophilus Nc4]
Length = 217
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISY 209
I++++ +R+A+ + + + GG+T+ N +++AGA+ + ++G F + +
Sbjct: 143 IQASLELLREARKKLK---LPIVAIGGITTENAPQVIEAGANAVAIIG-GLFKSQDIRAT 198
Query: 210 AKR 212
A
Sbjct: 199 AAA 201
>gi|320100358|ref|YP_004175950.1| 3-hexulose-6-phosphate synthase [Desulfurococcus mucosus DSM 2162]
gi|319752710|gb|ADV64468.1| 3-hexulose-6-phosphate synthase [Desulfurococcus mucosus DSM 2162]
Length = 217
Score = 47.1 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKI-RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ ++ + G Q+ T+ ++ R+ + L S + V GG+ ++K L+ +GAD++
Sbjct: 133 VDVVLYHVGISVQRSRRVTVAQLLREIEGLRRNVSARIAVAGGIKPGDVKGLIASGADIV 192
Query: 195 VVGSSFFNQKGEISYAKRLND 215
VVG + + + +R+ +
Sbjct: 193 VVGGAITKAENPVQVVERILE 213
>gi|315230522|ref|YP_004070958.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase /
6-phospho-3-hexuloisomerase [Thermococcus barophilus MP]
gi|315183550|gb|ADT83735.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase /
6-phospho-3-hexuloisomerase [Thermococcus barophilus MP]
Length = 435
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + V+ G Q +S + + + + I + V GG+ I +++ GA +++
Sbjct: 158 VHYILVHTGIDEQAQGKSPLEDLEKVVKAVK---IPVAVAGGLNLETIPKVIELGATIII 214
Query: 196 VGSSFFNQKGEISYAKRLNDL 216
VG + + +R+ DL
Sbjct: 215 VGGAITKSENPEEVTRRIIDL 235
>gi|283795601|ref|ZP_06344754.1| thiamine-phosphate diphosphorylase [Clostridium sp. M62/1]
gi|291077272|gb|EFE14636.1| thiamine-phosphate diphosphorylase [Clostridium sp. M62/1]
Length = 219
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDL 216
+ + + SI + GG+ N+ L G D + VV S+ F + A+ L L
Sbjct: 153 VDALREIRNSVSIPIVAIGGIQPSNLMELAGTGVDGVAVV-SAIFAAERPGEAAENLRKL 211
Query: 217 KK 218
+
Sbjct: 212 AE 213
>gi|295091269|emb|CBK77376.1| thiamine-phosphate diphosphorylase [Clostridium cf. saccharolyticum
K10]
Length = 219
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDL 216
+ + + SI + GG+ N+ L G D + VV S+ F + A+ L L
Sbjct: 153 VDALREIRNSVSIPIVAIGGIQPSNLMELAGTGVDGVAVV-SAIFAAERPGEAAENLRKL 211
Query: 217 KK 218
+
Sbjct: 212 AE 213
>gi|124027029|ref|YP_001012349.1| hexulose-6-phosphate synthase [Hyperthermus butylicus DSM 5456]
gi|123977723|gb|ABM80004.1| hexulose-6-phosphate synthase [Hyperthermus butylicus DSM 5456]
Length = 251
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+ AG ++T ++ G+A+ + + +V++ ++ +
Sbjct: 106 AELACKAGASVVTV---LGLAPDETIEAAVRTAHNCGMAV--AVDMLGVRNVLERVEELE 160
Query: 138 IMTVNP-----GFGGQQLIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQAGA 191
+ V+ G Q+ + T ++R + I + + + V GG+ ++++AGA
Sbjct: 161 PLGVDIIELHVGIDVQRALGLTAAELRGLVSKIASKFNGVVAVAGGLNESTAPAMIEAGA 220
Query: 192 DLLVVGSSFFNQKGEISYAKRL 213
+ +VG + + + AK++
Sbjct: 221 SIAIVGGAITRSRDPVGMAKKI 242
>gi|284161326|ref|YP_003399949.1| tryptophan synthase subunit alpha [Archaeoglobus profundus DSM
5631]
gi|284011323|gb|ADB57276.1| tryptophan synthase, alpha subunit [Archaeoglobus profundus DSM
5631]
Length = 251
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 21/182 (11%)
Query: 53 VIRSLRSYSDSVFDCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTI 106
VI + + + + D+ I D+G D + L
Sbjct: 71 VIEEFKDNHRTPI-VLMTYYNPVFVRGLDNFIGTAKDSGVDAMLVVDLPIEEADDYLSVC 129
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPKIRQAKAL 164
KT +P TP L+ + + + + G G ++ +++A+ +
Sbjct: 130 EKYDMKTVFLASPNTPNDRLKAIDEASSGFVYLISLYGTTGARDRISSLAFDLVKRARGV 189
Query: 165 IGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSF------FNQKGEISYAKRLNDL 216
K L V G GV+ + +++ L++AGAD +VVGS+ F +K ++ +L
Sbjct: 190 CVKP---LAV-GFGVSKAEHVRELLKAGADGVVVGSAIVKLIEEFGEKAGDKIEEKCREL 245
Query: 217 KK 218
+K
Sbjct: 246 RK 247
>gi|239826148|ref|YP_002948772.1| TenI family transcriptional regulator [Geobacillus sp. WCH70]
gi|239806441|gb|ACS23506.1| thiamine monophosphate synthase [Geobacillus sp. WCH70]
Length = 202
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I ++++ + +I + GG+ S N + +++AGA + V S+ F + +S AK+L +
Sbjct: 139 IESLRSVVNRVNIPVIAIGGIHSNNAEQVLKAGAHGIAVMSAVFFAEDPVSEAKKLAKIV 198
Query: 218 K 218
K
Sbjct: 199 K 199
>gi|73668472|ref|YP_304487.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanosarcina barkeri str. Fusaro]
gi|97049455|sp|Q46DY5|FAEHP_METBF RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|72395634|gb|AAZ69907.1| 3-hexulose-6-phosphate synthase [Methanosarcina barkeri str.
Fusaro]
Length = 392
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 49 FGADVIRSLRS-YSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRT 105
+G DVI +R D+ L + ++ADA D I + I + +
Sbjct: 212 YGMDVISRIREVRPDAFIVADLKTLDTGNLEARMVADAAGDAIVVSALAPISTIDKLIEE 271
Query: 106 IHAMGKKTGV-AINPETPVAILEDVIDEIDMILIM-TVNPGFGGQQLIESTIPKIRQAKA 163
H G + +N + P+++L+ + D+I + ++ I + K
Sbjct: 272 AHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELHRGIDIEATEHAW-----GNIAEIKK 326
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKK 218
+ K I + V GGV + + GAD+LVVG + N K A++ +N L K
Sbjct: 327 IAPK--ILVAVAGGVRLDKVPVALGQGADILVVGRAITNSKDVREVAEQFINSLNK 380
>gi|45358565|ref|NP_988122.1| tryptophan synthase subunit alpha [Methanococcus maripaludis S2]
gi|73622030|sp|Q6LYI9|TRPA_METMP RecName: Full=Tryptophan synthase alpha chain
gi|44921323|emb|CAF30558.1| Tryptophan synthase, alpha chain [Methanococcus maripaludis S2]
Length = 258
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 68/187 (36%), Gaps = 21/187 (11%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMIS-SI------DSHINIIADAGCDIITFHPESSPHI 99
I+ +V++ R SD+ LM + ++ + +AG + +
Sbjct: 64 IAKSFEVLKEFRKESDTP--VILMTYYNPVYKRGIENFVIQAKEAGANGLIIVDLPLQEA 121
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPK 157
+ T P TP L+ + L + G G + T
Sbjct: 122 TEYRKICKKHEMGTVFLAAPNTPEERLKISDEASTEFLYLISTFGITGARDTFEQMTFDF 181
Query: 158 IRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFF----NQKGEISYAK 211
I++A+ + V G G++ + +SL++ GAD ++VGS+F N
Sbjct: 182 IKRARTTCK---GKICV-GFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSKEALV 237
Query: 212 RLNDLKK 218
+L +L K
Sbjct: 238 KLEELAK 244
>gi|253996707|ref|YP_003048771.1| Orotidine 5'-phosphate decarboxylase [Methylotenera mobilis JLW8]
gi|253983386|gb|ACT48244.1| Orotidine 5'-phosphate decarboxylase [Methylotenera mobilis JLW8]
Length = 210
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + V GGV + K + AGA ++V G++ + + A + +
Sbjct: 160 GVEISVAGGVKAATAKQVKDAGATIIVAGAAIYGAADPAAAAAEITSI 207
>gi|150376312|ref|YP_001312908.1| thiamine-phosphate pyrophosphorylase [Sinorhizobium medicae WSM419]
gi|150030859|gb|ABR62975.1| thiamine-phosphate pyrophosphorylase [Sinorhizobium medicae WSM419]
Length = 201
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 15/176 (8%)
Query: 18 RLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSH 77
I + G K + V D GAD IRS + +V H ++ +
Sbjct: 11 NSAAWIERLVPLGVKLVQLRVKD--------LGADDIRSQIRLAKAVCSAHACQLIVNDY 62
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+ + GCD + E L I A G K G++ + E + + D I
Sbjct: 63 WRLAIEEGCDFVHLGQEDLADAD--LGAIRAAGLKLGLSTHDEAELET--ALAAGPDYIA 118
Query: 138 IMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ + P + + + ++ + +G+ + L GG+ I+ + GAD
Sbjct: 119 LGPIYPTILKKMKWAPQGLERLSTWRDRMGR--LPLVAIGGLNPERIEGVFAHGAD 172
>gi|312112159|ref|YP_003990475.1| thiamine-phosphate diphosphorylase [Geobacillus sp. Y4.1MC1]
gi|311217260|gb|ADP75864.1| Thiamine-phosphate diphosphorylase [Geobacillus sp. Y4.1MC1]
Length = 202
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + ++ +I + GG+ S N + ++QAGA + V S+ F K +S AK+L +
Sbjct: 139 IESLRNIVHHVNIPVIAIGGIHSDNAEQVLQAGAHGIAVMSAVFCAKDPVSEAKKLAKIV 198
Query: 218 K 218
K
Sbjct: 199 K 199
>gi|295401065|ref|ZP_06811039.1| Thiamine-phosphate diphosphorylase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976858|gb|EFG52462.1| Thiamine-phosphate diphosphorylase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 202
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + ++ +I + GG+ S N + ++QAGA + V S+ F K +S AK+L +
Sbjct: 139 IESLRNIVHHVNIPVIAIGGIHSDNAEQVLQAGAHGIAVMSAVFCAKDPVSEAKKLAKIV 198
Query: 218 K 218
K
Sbjct: 199 K 199
>gi|238792645|ref|ZP_04636277.1| hypothetical protein yinte0001_22290 [Yersinia intermedia ATCC
29909]
gi|238728001|gb|EEQ19523.1| hypothetical protein yinte0001_22290 [Yersinia intermedia ATCC
29909]
Length = 279
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG-------------KKTGVAINPET 121
+ I +IA +G D + H S ++ + H G G+A
Sbjct: 122 EQDILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPA 181
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
VA + ++ +DMI +MT G I I ++ AL+G S+ +GG+
Sbjct: 182 DVAQVAKTMEMLGVDMIGLMTGMSYEGVSAGDIPDAIK--QRLLALVGAVSVPTLAEGGI 239
Query: 179 TSRNIKSLVQAGADLLVVGSSF 200
N K+ G ++LVVG++
Sbjct: 240 NLENAKAFKDTGVNILVVGTAI 261
>gi|304313833|ref|YP_003848980.1| formaldehyde activating enzyme fused to 3-hexulose-6-phosphate
synthase [Methanothermobacter marburgensis str. Marburg]
gi|302587292|gb|ADL57667.1| formaldehyde activating enzyme fused to 3-hexulose-6-phosphate
synthase [Methanothermobacter marburgensis str. Marburg]
Length = 406
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
IR+ K ++G R + + V GG+T ++ + +GAD++VVG + A+
Sbjct: 331 IREIKDILGPRGL-VAVAGGITPSKMQEALDSGADIIVVGRYIIGSRDVRRAAE 383
>gi|164686493|ref|ZP_02210521.1| hypothetical protein CLOBAR_00058 [Clostridium bartlettii DSM
16795]
gi|164604504|gb|EDQ97969.1| hypothetical protein CLOBAR_00058 [Clostridium bartlettii DSM
16795]
Length = 218
Score = 46.7 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ Q K + + SI + GG++ N L G D + V S+ F + K+L DL
Sbjct: 153 MAQLKEISEEVSIPVVAIGGISIDNALELKGTGIDGICVISAIFGSENPSEATKKLLDLS 212
Query: 218 KSALA 222
K ++
Sbjct: 213 KQIIS 217
>gi|254455533|ref|ZP_05068962.1| tryptophan synthase, alpha subunit [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082535|gb|EDZ59961.1| tryptophan synthase, alpha subunit [Candidatus Pelagibacter sp.
HTCC7211]
Length = 266
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 9/133 (6%)
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+ D + + D + P + G ++P T L+ +I
Sbjct: 109 CNEDKFLEKCKKSKVDGLIVVDLPYPENQSFAAKCKKKGINFIQLVSPTTSEIRLKKIIK 168
Query: 132 EI-DMILIMTVNPGFGGQ-QLIES-TIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLV 187
+ DMI +++ GG+ ++ + K + K +++ V G G+T + IKSL
Sbjct: 169 DSHDMIYYISMLSTTGGKLKVSPKKILEKYSKIKNQNKSKNV---VIGFGITEKTIKSLK 225
Query: 188 QAGADLLVVGSSF 200
+A D LVVGS+
Sbjct: 226 KA--DGLVVGSAI 236
>gi|291612512|ref|YP_003522669.1| thiamine-phosphate pyrophosphorylase [Sideroxydans lithotrophicus
ES-1]
gi|291582624|gb|ADE10282.1| thiamine-phosphate pyrophosphorylase [Sideroxydans lithotrophicus
ES-1]
Length = 210
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++ + ++ + GG+T +N +L++AGAD + V S+ +N + A + L
Sbjct: 148 VALLRSARKELNVPIVAIGGITQQNAATLIEAGADAVAVISALWNAPDIEASAHGFSTL 206
>gi|302379894|ref|ZP_07268374.1| thiamine-phosphate diphosphorylase [Finegoldia magna
ACS-171-V-Col3]
gi|303235088|ref|ZP_07321711.1| thiamine-phosphate diphosphorylase [Finegoldia magna BVS033A4]
gi|302312283|gb|EFK94284.1| thiamine-phosphate diphosphorylase [Finegoldia magna
ACS-171-V-Col3]
gi|302493792|gb|EFL53575.1| thiamine-phosphate diphosphorylase [Finegoldia magna BVS033A4]
Length = 212
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 5/130 (3%)
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
CD+ H + R + K G++ + T LE D I + + P F
Sbjct: 80 CDVDGVHLGQKDMPIKYAREMLGDDKIIGISCH--TLEQALEAQEAGADYIGVGAIFPTF 137
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
G + TI +++ I + + GG+ NI+ + + D + + S+ F+
Sbjct: 138 TGDDFVRVTIDTLKEISEKI---HVPITAIGGINKNNIRMIFDSNVDSVSLTSAVFSTGD 194
Query: 206 EISYAKRLND 215
+ + L
Sbjct: 195 VAASTQELKQ 204
>gi|126178694|ref|YP_001046659.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanoculleus marisnigri JR1]
gi|125861488|gb|ABN56677.1| 3-hexulose-6-phosphate synthase [Methanoculleus marisnigri JR1]
Length = 429
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 84/223 (37%), Gaps = 26/223 (11%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKA---GAKQIHFDVMDGCFVPNI-SFGADVIRSL 57
TP++Q+ D L + +A GA I P I S G +R+L
Sbjct: 3 TPTLQVA-----LDLLELDRAVEIADEAVRGGADWIEV------GTPLIKSEGMQAVRTL 51
Query: 58 RSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTG 114
R M + + + A +G ++ ++ I ++R+ G +
Sbjct: 52 RERFPGHEIVADMKIADTGAVEVEMAAKSGAGVVCILADADDAVIVEAVRSARKYGVRLM 111
Query: 115 V-AINPETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
IN PV+ ++ +D I + G Q + S++ + L G+ + +
Sbjct: 112 ADLINVADPVSRSRELAALGVDYI---NAHVGIDQQMIGRSSLD---LLRRLAGEVGVPI 165
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V GG+ + V AGA +++VG + A+R+ +
Sbjct: 166 AVAGGLDAETASEAVAAGASVVIVGGNIVKAADVTGAARRVRE 208
>gi|305664306|ref|YP_003860594.1| Orotidine 5'-phosphate decarboxylase [Ignisphaera aggregans DSM
17230]
gi|304378875|gb|ADM28714.1| Orotidine 5'-phosphate decarboxylase [Ignisphaera aggregans DSM
17230]
Length = 226
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ +++++ G Q+ T ++ + I + + V GG+ I ++ GA ++V
Sbjct: 140 VEVVSLHVGVDVQKKRGVTAKELLKEIEEISSSDVIVSVAGGIKPSEISQFIEYGAKIIV 199
Query: 196 VGSSFFNQKGE-ISYAKRLNDLKK 218
+GS+ S + +N L K
Sbjct: 200 IGSAITKSPDPYKSSLEAINILNK 223
>gi|226312809|ref|YP_002772703.1| thiamine-phosphate pyrophosphorylase [Brevibacillus brevis NBRC
100599]
gi|226095757|dbj|BAH44199.1| thiamine-phosphate pyrophosphorylase [Brevibacillus brevis NBRC
100599]
Length = 220
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
G+ + + +IR+A + + GG+T N ++ AGAD + + S+ +
Sbjct: 150 AGEPIGPVGLEEIRKA----VGHDLPIVGIGGITLENATEVLAAGADGVAIISAISRAES 205
Query: 206 EISYAKRLNDLKK 218
A+ L + +
Sbjct: 206 PEKAAQALQRIVR 218
>gi|11093955|gb|AAG29505.1|AF294615_1 3-hexulose-6-phosphate synthase [Aminomonas aminovorus]
Length = 228
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+ + V GGV S K +V AGA ++V G++ +
Sbjct: 162 GVDISVAGGVKSTTAKQVVDAGATIVVAGAAIYG 195
>gi|317497098|ref|ZP_07955425.1| 3-hexulose-6-phosphate synthase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895643|gb|EFV17798.1| 3-hexulose-6-phosphate synthase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 208
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ ++ V+ G Q + I ++ K + + V GG++S+ I V+ D+++
Sbjct: 128 VDVLAVHTGADAQAVGREPIGDLKVMKE--SSKKAEIAVAGGISSKTIAKYVELKPDIVI 185
Query: 196 VGSSFFNQKGEISYAKRLND 215
VGS+ N + ++ AK + +
Sbjct: 186 VGSAIGNAEDPVAEAKAIKE 205
>gi|198284972|ref|YP_002221293.1| thiamine-phosphate pyrophosphorylase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218667114|ref|YP_002427657.1| thiamine-phosphate pyrophosphorylase [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|226695856|sp|B7JBI2|THIE_ACIF2 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|226726681|sp|B5ERP0|THIE_ACIF5 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|198249493|gb|ACH85086.1| thiamine-phosphate pyrophosphorylase [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218519327|gb|ACK79913.1| thiamine-phosphate pyrophosphorylase [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 217
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ + A+A+I + + GG+T N ++L+ AGAD L V S F + A+R
Sbjct: 152 SVDVLTAARAMID---LPIVAIGGITEANGRALIAAGADALAVISGVFAAEDVEGAARRF 208
Query: 214 NDL 216
L
Sbjct: 209 TAL 211
>gi|119719768|ref|YP_920263.1| quinolinate phosphoribosyl transferase [Thermofilum pendens Hrk 5]
gi|119524888|gb|ABL78260.1| Quinolinate phosphoribosyl transferase [Thermofilum pendens Hrk 5]
Length = 413
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
PG E I ++R +G + + + V GG+ I SL +AGAD VG++
Sbjct: 255 TPGSRRGNF-EDIIREVRWRLDTLGYKHVKIVVSGGIDEYRIPSLARAGADAFGVGAAI- 312
Query: 202 NQKGEISYAKRLNDLKK 218
+ I +A + +K+
Sbjct: 313 STAPPIDFAMDITAVKR 329
>gi|118590222|ref|ZP_01547625.1| thiamine-phosphate pyrophosphorylase [Stappia aggregata IAM 12614]
gi|118437194|gb|EAV43832.1| thiamine-phosphate pyrophosphorylase [Stappia aggregata IAM 12614]
Length = 201
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 17/195 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
I + G K + + D I + RS CHL+++ + +
Sbjct: 16 IERLVPLGIKLVQLRIKDTSD----DILRKEIAASRSVCVKH-GCHLVVND---YWQLAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID-EIDMILIMTV 141
+ GCD H + I G K GV+ + L+ + E D + + V
Sbjct: 68 EEGCDF--VHLGQEDLAEADVAAIRKAGLKLGVSTH---DGEELQTALSTEPDYVALGPV 122
Query: 142 NPGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
P + + KI + + IG S+ L GG+ + + + GAD+ V +
Sbjct: 123 YPTILKELKWAPQGVEKIGRWRQQIG--SLPLVAIGGLNPERLPGVFENGADIAAVATDI 180
Query: 201 FNQKGEISYAKRLND 215
+ + +
Sbjct: 181 TRNADPEARTREWIE 195
>gi|20093392|ref|NP_619467.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanosarcina acetivorans C2A]
gi|74527158|sp|Q8THA9|FAEHP_METAC RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|19918761|gb|AAM07947.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Methanosarcina
acetivorans C2A]
Length = 392
Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 11/175 (6%)
Query: 49 FGADVIRSLRS-YSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRT 105
+G DVI +R D+ L + ++ADA D I + I + +
Sbjct: 212 YGVDVISKIRQVRPDAFIVADLKTLDTGNLEARMVADAAGDAIVVSALAPISTIDKLIEE 271
Query: 106 IHAMGKKTGV-AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
H G + +N P+++L+ + D+I + G E I + K +
Sbjct: 272 AHKTGIYAVMDTLNQHDPISVLKQLKVMPDVIELH-RGIDIEG---TEHAWGNIGEIKKI 327
Query: 165 IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKK 218
K + V GGV + + GAD+LVVG + N K A++ +N L K
Sbjct: 328 APK--ALIAVAGGVRLDKVPVALGQGADILVVGRAITNAKDVREVAEQFINALNK 380
>gi|84490278|ref|YP_448510.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanosphaera stadtmanae DSM 3091]
gi|97049499|sp|Q2NE86|FAEHP_METST RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|84373597|gb|ABC57867.1| formaldehyde activating enzyme fused to 3-hexulose-6-phosphate
synthase [Methanosphaera stadtmanae DSM 3091]
Length = 406
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 64/170 (37%), Gaps = 8/170 (4%)
Query: 49 FGADVIRSLRS-YSDSVFDCHLMISSIDSH-INIIADAGCDIITFH-PESSPHIRRSLRT 105
FG ++I +R + L + + + AD D + ++ I +++
Sbjct: 215 FGVEIISKIREERPGAFIIADLKTLDVGRVEVKMAADETADAVAISGLGTNESIEKAIHE 274
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF----GGQQLIESTIPKIRQA 161
G + + + + + + + I+++ N +S I+
Sbjct: 275 CSKQGIYSILDMMNVSDIPSKLEELKLKPNIVLLHRNIDSETMRDNDGEQQSEWGNIKDI 334
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
K+ +GKR + + V GGVT + + + GA++++ G A+
Sbjct: 335 KSKLGKRGL-IAVAGGVTPEKVDTALANGANIIIAGRYIIGSSDVRRAAE 383
>gi|76802661|ref|YP_330756.1| thiamine-phosphate pyrophosphorylase [Natronomonas pharaonis DSM
2160]
gi|121708028|sp|Q3IP34|THIE_NATPD RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|76558526|emb|CAI50118.1| thiamine-phosphate pyrophosphorylase [Natronomonas pharaonis DSM
2160]
Length = 214
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +IR + S+ GGVT N +V+AGAD + V S+ +RL
Sbjct: 148 LDRIRAVR---DATSLPFVGIGGVTPDNAAPVVEAGADGVAVISAITAADDPEHATRRLA 204
Query: 215 D 215
D
Sbjct: 205 D 205
>gi|126178212|ref|YP_001046177.1| thiamine-phosphate pyrophosphorylase [Methanoculleus marisnigri
JR1]
gi|189030571|sp|A3CS45|THIE_METMJ RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|125861006|gb|ABN56195.1| thiamine-phosphate diphosphorylase [Methanoculleus marisnigri JR1]
Length = 211
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ K + S+ L GG+T+ N+ ++ AGAD + V S+ + + A+ L D
Sbjct: 144 LAALKEIRAAVSLPLVAIGGITAANVADVIAAGADGVAVISAVVGEGDVTAAARSLRDRI 203
Query: 218 KSALA 222
+A A
Sbjct: 204 AAAKA 208
>gi|291547281|emb|CBL20389.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase, eukaryotic type [Ruminococcus sp. SR1/5]
Length = 256
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
QA +GK L++ GG+ N ++AGA ++V S F G IS+ + L ++
Sbjct: 72 AQALQALGKYPGGLQIGGGICPENAAEYLEAGASHVIVTSYVFK-NGVISW-ENLEKIRD 129
Query: 219 SA 220
+A
Sbjct: 130 AA 131
>gi|56694976|ref|YP_165322.1| thiamine-phosphate pyrophosphorylase [Ruegeria pomeroyi DSS-3]
gi|56676713|gb|AAV93379.1| thiamine-phosphate pyrophosphorylase [Ruegeria pomeroyi DSS-3]
Length = 198
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 70/173 (40%), Gaps = 15/173 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + G K + + D VIR+ + + H + I+ +
Sbjct: 16 LRRMLPLGVKLVQLRIKDQSD--------PVIRAEIDTARDLCRAHGAVLVINDYWQAAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
DAGCD + E L I G + GV+ + + + + + + D + + V
Sbjct: 68 DAGCDWLHLGQEDLDQAD--LPAIRKAGLRLGVSTHDDDELERVLGM--DPDYVALGPVY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
P Q + + +P++ + KA +G SI L GG++ ++ AGAD++
Sbjct: 124 PTILKQMKWHQQGLPRVTEWKARVG--SIPLVGIGGMSVERAPGVLGAGADIV 174
>gi|123442893|ref|YP_001006868.1| hypothetical protein YE2677 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089854|emb|CAL12710.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 279
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG-------------KKTGVAINPET 121
+ I +IA +G D + H S ++ + H G G+A
Sbjct: 122 EQDILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPA 181
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
VA + ++E +DMI +MT G I I ++ AL+G S+ +GG+
Sbjct: 182 EVAEVAKKMEELGVDMIGLMTGMSYEGVSAGDIPDVIK--QRLLALVGAVSVPTLAEGGI 239
Query: 179 TSRNIKSLVQAGADLLVVGSSF 200
N K+ G ++LVVG++
Sbjct: 240 NLENAKAFKNTGVNILVVGTAI 261
>gi|328952886|ref|YP_004370220.1| 3-hexulose-6-phosphate synthase [Desulfobacca acetoxidans DSM
11109]
gi|328453210|gb|AEB09039.1| 3-hexulose-6-phosphate synthase [Desulfobacca acetoxidans DSM
11109]
Length = 430
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 73/214 (34%), Gaps = 25/214 (11%)
Query: 12 LAADFSRLGEEI---SNITKAGAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDC 67
LA DF L + + AGA + P I S G + +R LR
Sbjct: 7 LALDFVDLSRALLVAESAMAAGADWL------EAGTPLIKSEGLNAVRELRRRFPHHCIV 60
Query: 68 HLM-ISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGV----AINPE 120
M I + A AG +++ +S I ++ G K V +P
Sbjct: 61 ADMKIMDAGRIEVECAAKAGANLVDVLGAASDATIAECIQAGKNYGAKIVVDLISVPDPV 120
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
T +E + + +TV+ Q + +RQ + I + V GG+ S
Sbjct: 121 TRARQVEALGADY-----LTVHVAIDDQMVGRDPFETLRQVSQAVQ---IPVGVAGGINS 172
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
V +GA ++VG + K + +
Sbjct: 173 ATAAQAVASGASYIIVGGAITKAKNPDQATREIR 206
>gi|329122169|ref|ZP_08250776.1| thiamine-phosphate diphosphorylase [Dialister micraerophilus DSM
19965]
gi|327466807|gb|EGF12330.1| thiamine-phosphate diphosphorylase [Dialister micraerophilus DSM
19965]
Length = 212
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 87 DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
D H S R I K G++ + T + D + V F
Sbjct: 81 DAAGVHLGQSDMPADIARKIIGQNKILGISASNLTEAKKAYE-----DGADYLGVGAMFA 135
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
Q ++ + +++ K + I + V GG+ + I + D V S+ ++K
Sbjct: 136 TQTKPDADVTSMKELKKIRENVDIPIVVIGGINCKTISLFSKIKVDGFAVVSAIMSEKDS 195
Query: 207 ISYAKRLND 215
+K L +
Sbjct: 196 GKASKDLIE 204
>gi|218884767|ref|YP_002429149.1| Hexulose-6-phosphate synthase [Desulfurococcus kamchatkensis 1221n]
gi|218766383|gb|ACL11782.1| Hexulose-6-phosphate synthase [Desulfurococcus kamchatkensis 1221n]
Length = 216
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ +I + I S + V GG+ +++ LV G D++VVG + +
Sbjct: 154 HMLKEIENLRRSI---SAKIAVAGGIKPGDVRELVSRGVDIIVVGGAITKASNPLEVVDE 210
Query: 213 L 213
+
Sbjct: 211 I 211
>gi|77164128|ref|YP_342653.1| thiamine-phosphate diphosphorylase [Nitrosococcus oceani ATCC
19707]
gi|254435703|ref|ZP_05049210.1| thiamine-phosphate pyrophosphorylase [Nitrosococcus oceani AFC27]
gi|123594891|sp|Q3JDH3|THIE_NITOC RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|76882442|gb|ABA57123.1| thiamine-phosphate diphosphorylase [Nitrosococcus oceani ATCC
19707]
gi|207088814|gb|EDZ66086.1| thiamine-phosphate pyrophosphorylase [Nitrosococcus oceani AFC27]
Length = 217
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLND 215
+ ++ + GG+T N +++AGA + V+G F + + A
Sbjct: 150 LREARKNLNLPIVAIGGITPENALQVIEAGASAVAVIG-GLFKSRDIRAAAAAYRQ 204
>gi|289522121|ref|ZP_06438975.1| putative nicotinate-nucleotide pyrophosphorylase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504651|gb|EFD25815.1| putative nicotinate-nucleotide pyrophosphorylase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 347
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
PG G + + + ++R + G + + V GG+ IK L+ AGAD+ VGS
Sbjct: 251 TPGERG-GVSPALVREVRWRLDVEGFNHVKIVVSGGLNPERIKLLLHAGADVFGVGSYI 308
>gi|20094080|ref|NP_613927.1| geranylgeranylglyceryl phosphate synthase-like protein
[Methanopyrus kandleri AV19]
gi|31563187|sp|Q8TXM0|GGGPS_METKA RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|19887069|gb|AAM01857.1| Predicted phosphate-binding enzyme of the TIM-barrel fold
[Methanopyrus kandleri AV19]
Length = 239
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA-KRLNDL 216
GG+ + + L +AGAD +V G++ + + + DL
Sbjct: 197 GGIRSPETARELAEAGADAIVTGTAVERDPDLAAEIVEAIKDL 239
>gi|18893100|gb|AAL81163.1| hypothetical protein PF1039 [Pyrococcus furiosus DSM 3638]
Length = 347
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 37/128 (28%)
Query: 127 EDVIDEIDMILIMTVNPG-----FGGQQLIESTIPKIRQAKALIGKR------------- 168
+ ++ I M I V PG G + I PKI A AL G+
Sbjct: 217 KYNLEPIPMAYI-IVEPGETAGWVGDAKPIPRHKPKIAAAYALAGQYLGMRLVYLEAGSG 275
Query: 169 -----------------SISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ L V GG+ + ++ LV+AGAD++V G++ +
Sbjct: 276 APQPVPETMVATVKKAIDVPLIVGGGIRSGEQVRKLVKAGADIIVTGTAIESAGSIEEAR 335
Query: 211 KRLNDLKK 218
K+L DL++
Sbjct: 336 KKLEDLRR 343
>gi|28871914|ref|NP_794533.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213966831|ref|ZP_03394982.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tomato T1]
gi|301381962|ref|ZP_07230380.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tomato Max13]
gi|302058778|ref|ZP_07250319.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tomato K40]
gi|302135154|ref|ZP_07261144.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|47606159|sp|Q87VY6|THIE_PSESM RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|28855167|gb|AAO58228.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213928681|gb|EEB62225.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tomato T1]
gi|331014764|gb|EGH94820.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 205
Score = 45.9 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAETPQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|119382795|ref|YP_913851.1| thiamine-phosphate pyrophosphorylase [Paracoccus denitrificans
PD1222]
gi|119372562|gb|ABL68155.1| thiamine-phosphate diphosphorylase [Paracoccus denitrificans
PD1222]
Length = 198
Score = 45.9 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 10/154 (6%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
H + ++ H D GCD I E + I G + G++ + +
Sbjct: 53 HGAMLVVNDHWQAAIDLGCDFIHLGQEDLDEAD--IPAIRKAGLRLGISTHDHAELDRAL 110
Query: 128 DVIDEIDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
+ D + + V P + + + + ++R+ + L+G + GGVT
Sbjct: 111 ALRP--DYVALGPVWPTILKKMKWEQQGLDRVREWRRLVGATPL--VAIGGVTPERALEA 166
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
AGAD+ S+ + R+ + + A
Sbjct: 167 FTAGADVA---SAVTDITLNPDPEGRIREWLRVA 197
>gi|91772997|ref|YP_565689.1| orotidine-5'-phosphate decarboxylase [Methanococcoides burtonii DSM
6242]
gi|121684386|sp|Q12X87|PYRF_METBU RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
gi|91712012|gb|ABE51939.1| Orotidine 5'-phosphate decarboxylase [Methanococcoides burtonii DSM
6242]
Length = 215
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 10/170 (5%)
Query: 50 GADVIRSLRSYSDSVFDCHLM-ISSIDSHI-NIIADAGCDIITFHPESSPH-IRRSLRTI 106
G +++ L + + D + I + D I + +AG I H + + ++
Sbjct: 44 GLSIVKELVEIAPVIADFKVADIPNTDRLICEHVFNAGAAGIITHGFTGRDSLDSCVKVA 103
Query: 107 HAMGKKTGVAINPETP--VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
+ G V P V V ++I M V G G + +++ + +
Sbjct: 104 NEFGTDVYVVTEMSHPGGVEFFRPVAEDIAS---MAVEAGASGVVAPATRPERVKDIRKI 160
Query: 165 IGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
IG+ +S+ G G + +++AGAD ++VG S +N AK++
Sbjct: 161 IGE-ELSIISPGVGAQGGSAADVIRAGADWVIVGRSIYNSDSPAEAAKKI 209
>gi|332828407|gb|EGK01116.1| thiamine-phosphate pyrophosphorylase [Dysgonomonas gadei ATCC
BAA-286]
Length = 212
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 16/137 (11%)
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM-ILIMTVNPG 144
CD H S R + K G+ V ++D ID ++ + + ++P
Sbjct: 79 CDAGGLHIGQSDMPYSVARKLLGKDKIIGL------SVESIQDAIDANNLDVDYIGISPV 132
Query: 145 FGGQQLIEST----IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSS 199
FG Q ++ + I + + G S+ + GG+ N + ++QAGAD + VV S+
Sbjct: 133 FGTQTKTDTAPALGLEGIGEITRISGHPSVGI---GGINLTNAQDIIQAGADGISVV-SA 188
Query: 200 FFNQKGEISYAKRLNDL 216
+ A++L ++
Sbjct: 189 IMSAPDPQQSARQLKEI 205
>gi|323692960|ref|ZP_08107181.1| thiamine-phosphate pyrophosphorylase [Clostridium symbiosum
WAL-14673]
gi|323502961|gb|EGB18802.1| thiamine-phosphate pyrophosphorylase [Clostridium symbiosum
WAL-14673]
Length = 227
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDL 216
+ Q +A+ SI + GG+ S NI L +G D + VV S+ F + L
Sbjct: 153 MEQLRAIRNAVSIPIVAIGGINSGNIMRLAGSGVDGVAVV-SAIFAAPHPGEATAGMLKL 211
Query: 217 KKSALAI 223
+ L+
Sbjct: 212 AEEMLSA 218
>gi|159906039|ref|YP_001549701.1| tryptophan synthase subunit alpha [Methanococcus maripaludis C6]
gi|238687000|sp|A9AAU6|TRPA_METM6 RecName: Full=Tryptophan synthase alpha chain
gi|159887532|gb|ABX02469.1| tryptophan synthase, alpha subunit [Methanococcus maripaludis C6]
Length = 258
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 68/187 (36%), Gaps = 21/187 (11%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMIS-SI------DSHINIIADAGCDIITFHPESSPHI 99
I+ +V++ R S++ LM + ++ + +AG + +
Sbjct: 64 IAKSFEVLKEFRKESNTP--VILMTYYNPVYKRGIENFVISAKEAGANGLVIVDLPLQEA 121
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPK 157
T P TP L+ + L + G G + + T
Sbjct: 122 TEYREICKKHEMGTVFLAAPNTPEDRLKTSDEASTEFLYLISTFGITGARESFEQMTFDF 181
Query: 158 IRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFF----NQKGEISYAK 211
I++A+ + V G G++ + +SL++ GAD ++VGS+F N
Sbjct: 182 IKRARTTCK---GKICV-GFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSEEALV 237
Query: 212 RLNDLKK 218
+L +L K
Sbjct: 238 KLEELAK 244
>gi|259418295|ref|ZP_05742213.1| thiamine-phosphate pyrophosphorylase [Silicibacter sp. TrichCH4B]
gi|259345690|gb|EEW57534.1| thiamine-phosphate pyrophosphorylase [Silicibacter sp. TrichCH4B]
Length = 198
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + G K + + D D+++ S + + + ++ + +
Sbjct: 16 LRRMLPLGVKLVQLRIKDQ--------SRDIVKEQIEQSRDLCRRYGAVLVVNDYWQLAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+ GCD + E L+ I A G K GV+ + E + + + + D + + V
Sbjct: 68 ELGCDWLHLGQEDLDDAD--LKAIRAAGLKLGVSTHDEDELDRVLSI--DPDYVALGPVY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
P + + + +P++ + K IG I L GG++ +++AGAD++
Sbjct: 124 PTILKKMKWHQQGLPRVSEWKTRIG--DIPLVGIGGMSVERAAGVLEAGADIV 174
>gi|194333738|ref|YP_002015598.1| modD protein [Prosthecochloris aestuarii DSM 271]
gi|194311556|gb|ACF45951.1| modD protein [Prosthecochloris aestuarii DSM 271]
Length = 270
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 12/115 (10%)
Query: 101 RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
R L +I + + VA+ ET + D+I + +L + KI
Sbjct: 167 RELPSIRSRCPEKKVAVEVETLDHAVMAAEAGADIIQL---------DKLKPEAVEKIVN 217
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
R I + GGV + N ++ AGAD+LV S + K + Y +
Sbjct: 218 TIK-PSHRHIVIAAAGGVNASNAEAYGAAGADVLVS-SWMYFGK-PVDYKVVVRK 269
>gi|73662935|ref|YP_301716.1| hexulose-6-phosphate synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119370763|sp|Q49WT0|HPS2_STAS1 RecName: Full=3-hexulose-6-phosphate synthase 2; Short=HPS 2;
AltName: Full=D-arabino-3-hexulose-6-phosphate
formaldehyde lyase 2
gi|72495450|dbj|BAE18771.1| putative hexulose-6-phosphate synthase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 213
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 9/211 (4%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSV-FDCHLM 70
LA D E+ + + H D+++ I+ G ++ L D V L
Sbjct: 5 LAIDLLN-KEDAAELANKVKD--HVDIVEIGTPIVINEGLPAVQHLNDNVDGVKVLADLK 61
Query: 71 ISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILED 128
I + ++ G DI+T + I+ ++ H GK+ V + +
Sbjct: 62 IMDAADYEVSQAVKFGADIVTILGVAEDASIKAAVDEAHKHGKQLLVDMIAVQDLEKRAK 121
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+D++ I V+ G+ Q +S + +R+ K++I + + V GG+ IK +V
Sbjct: 122 DLDDLGADYI-AVHTGYDLQAEGQSPLESLRKVKSVIS--NSKVAVAGGIKPDTIKDIVA 178
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
DL++VG N + AK+ D+ +
Sbjct: 179 ENPDLIIVGGGIANADDPVEAAKQCRDIVDA 209
>gi|313891499|ref|ZP_07825112.1| thiamine-phosphate diphosphorylase [Dialister microaerophilus UPII
345-E]
gi|313120076|gb|EFR43255.1| thiamine-phosphate diphosphorylase [Dialister microaerophilus UPII
345-E]
Length = 212
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 6/133 (4%)
Query: 87 DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
D H R I K G++ + T + D + V F
Sbjct: 81 DAAGVHLGQFDMPADIARKIIGQNKILGISASNLTEAKKAYE-----DGADYLGVGAMFA 135
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
Q ++ + +++ K + I + V GG+ + I + D V S+ ++K
Sbjct: 136 TQTKPDADVTSMKELKKIRENVDIPIVVIGGINCKTIPLFSKIKVDGFAVVSAIMSEKDS 195
Query: 207 ISYAKR-LNDLKK 218
+K + +++K
Sbjct: 196 GKASKDLIKEIQK 208
>gi|312886364|ref|ZP_07745974.1| thiamine-phosphate diphosphorylase [Mucilaginibacter paludis DSM
18603]
gi|311301149|gb|EFQ78208.1| thiamine-phosphate diphosphorylase [Mucilaginibacter paludis DSM
18603]
Length = 216
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I + + + K +++ GG+ N S++ AGAD L + S+ + + A+RL +L
Sbjct: 150 IHRVRQITNKPLVAI---GGINEANAASIITAGADCLAIVSAICSAENPALAAERLRNL 205
>gi|157364773|ref|YP_001471540.1| orotidine 5'-phosphate decarboxylase [Thermotoga lettingae TMO]
gi|157315377|gb|ABV34476.1| orotidine 5'-phosphate decarboxylase [Thermotoga lettingae TMO]
Length = 202
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 21/136 (15%)
Query: 89 ITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT---VNPGF 145
T H + + + + K + + LED +D+I+ I I+ V PG
Sbjct: 77 FTVHAAAG--VDSLKAALESTDKIVFAVVKLTSVEGELEDYLDQINSIKILGCSFVLPGK 134
Query: 146 GGQQLIESTIPKI-----RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+L + KI R + +R + V +I + AD V+G
Sbjct: 135 WAMKLRKQIPAKILVAGIRMLRQADDQRDV-------VNLEDILQV----ADYAVIGREV 183
Query: 201 FNQKGEISYAKRLNDL 216
+ +R+ +
Sbjct: 184 YRSVDPSEAMERIRRI 199
>gi|191637237|ref|YP_001986403.1| Putative hexulose 6 phosphate synthase [Lactobacillus casei BL23]
gi|190711539|emb|CAQ65545.1| Putative hexulose 6 phosphate synthase [Lactobacillus casei BL23]
gi|327381276|gb|AEA52752.1| Putative hexulose-6-phosphate synthase [Lactobacillus casei LC2W]
Length = 223
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ ++V+ GF QQ+ + + +R KA SI + V GG+ S+ I + D+++
Sbjct: 134 VHFISVHTGFDQQQMGRTPLNDLRIVKA--NTNSIRVSVAGGINSKTIDQYLALEPDVVI 191
Query: 196 VGSSFFNQKGEISYAKRLND 215
+G + + A+++ +
Sbjct: 192 MGGGLADADDPVDEARKIRE 211
>gi|323486101|ref|ZP_08091432.1| thiamine-phosphate pyrophosphorylase [Clostridium symbiosum
WAL-14163]
gi|323400668|gb|EGA93035.1| thiamine-phosphate pyrophosphorylase [Clostridium symbiosum
WAL-14163]
Length = 227
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDL 216
+ Q +A+ SI + GG+ S NI L +G D + VV S+ F + L
Sbjct: 153 MEQLRAIRNAVSIPIVAIGGINSGNIMRLAGSGVDGVAVV-SAIFAAPHPGEATAGMLKL 211
Query: 217 KKSALAI 223
+ L+
Sbjct: 212 AEEMLSA 218
>gi|327384447|gb|AEA55921.1| Putative hexulose-6-phosphate synthase [Lactobacillus casei BD-II]
Length = 220
Score = 45.5 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ ++V+ GF QQ+ + + +R KA SI + V GG+ S+ I + D+++
Sbjct: 131 VHFISVHTGFDQQQMGRTPLNDLRIVKA--NTNSIRVSVAGGINSKTIDQYLALEPDVVI 188
Query: 196 VGSSFFNQKGEISYAKRLND 215
+G + + A+++ +
Sbjct: 189 MGGGLADADDPVDEARKIRE 208
>gi|325961666|ref|YP_004239572.1| 3-hexulose-6-phosphate synthase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323467753|gb|ADX71438.1| 3-hexulose-6-phosphate synthase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 207
Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V GGV I ++ +AGA++ VVG S ++ AK L
Sbjct: 163 VAGGVNLSTIGAVQRAGAEVAVVGGSIYSADDPGVAAKELKA 204
>gi|296242802|ref|YP_003650289.1| orotidine 5'-phosphate decarboxylase [Thermosphaera aggregans DSM
11486]
gi|296095386|gb|ADG91337.1| Orotidine 5'-phosphate decarboxylase [Thermosphaera aggregans DSM
11486]
Length = 218
Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + + L S + V GG+ +IK L+ +G D++VVG + K++
Sbjct: 156 INEVRELRRLVSSKIAVAGGLKPGDIKPLIDSGVDIVVVGGAITKNPEPEKVVKQI 211
>gi|302185139|ref|ZP_07261812.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
syringae 642]
Length = 205
Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENTQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 ARAF 201
>gi|297538735|ref|YP_003674504.1| Orotidine 5'-phosphate decarboxylase [Methylotenera sp. 301]
gi|297258082|gb|ADI29927.1| Orotidine 5'-phosphate decarboxylase [Methylotenera sp. 301]
Length = 210
Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 23/51 (45%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + V GGV + + AGA ++V G++ + + A + + +
Sbjct: 160 GVEISVAGGVKAATTAQVRDAGATIIVAGAAIYGAADPAASAAEITAIAHA 210
>gi|330945575|gb|EGH47084.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 205
Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENTQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 ARAF 201
>gi|297840161|ref|XP_002887962.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333803|gb|EFH64221.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 62
Score = 45.5 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 81 IADAGCDIITFHPE-SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
+A AG T H E + + + + I ++G + GVA+ P TPV + ++
Sbjct: 1 MAKAGASGFTLHVEVAKENWQELVENIKSVGMRPGVALKPGTPVEQVYPLV 51
>gi|292493436|ref|YP_003528875.1| dihydroorotate dehydrogenase [Nitrosococcus halophilus Nc4]
gi|291582031|gb|ADE16488.1| dihydroorotate dehydrogenase family protein [Nitrosococcus
halophilus Nc4]
Length = 331
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 28/160 (17%)
Query: 43 FVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS 102
F + A V+ + R + L S + I A E+
Sbjct: 154 FGNDPDMSARVVEACRKVTHKPLITKL--SPNQTSIEENARRC-------IEAGTDAFAV 204
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
+ T+ + I TP L+ + G G + + K+RQ
Sbjct: 205 INTL----MGMAIDIEQRTP--------------LLGNIQGGVSGPAIKPIALLKVRQVY 246
Query: 163 ALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFF 201
+ + I + GGV +S + + AGA + VG++ F
Sbjct: 247 QVCRQHGIPIIGQGGVASSEDALEFLIAGATTVGVGTALF 286
>gi|224475718|ref|YP_002633324.1| putative hexulose-6-phosphate synthase [Staphylococcus carnosus
subsp. carnosus TM300]
gi|224476201|ref|YP_002633807.1| putative hexulose-6-phosphate synthase [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420325|emb|CAL27139.1| putative hexulose-6-phosphate synthase [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420808|emb|CAL27622.1| putative hexulose-6-phosphate synthase [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 210
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 25/218 (11%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL-- 69
LA D EE + + D+++ G +I + S D H+
Sbjct: 5 LAIDLLN-KEEAAELANKVKDY--VDIVE--------IGTPIIYNEGLPSVQYMDEHIDG 53
Query: 70 --------MISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPE 120
++ + D ++ G D++T + I+ ++ H K+ V +
Sbjct: 54 VKVLADMKIMDAADYEVSQAVKFGADVVTILGVAEDASIKAAIEEAHKNDKQLLVDMIAV 113
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
+ +DE+ I V+ G+ Q +S + + + K++I ++ + V GG+
Sbjct: 114 QDIEKRAKELDEMGADYI-AVHIGYDLQAEGKSPLEDLHKVKSVI--KNSKVAVAGGIKP 170
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
IK +V G DL++VG N + AK D K
Sbjct: 171 DTIKDIVAEGPDLVIVGGGIANADDPVEAAKACRDAVK 208
>gi|260432012|ref|ZP_05785983.1| thiamine-phosphate pyrophosphorylase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415840|gb|EEX09099.1| thiamine-phosphate pyrophosphorylase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 198
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 70/173 (40%), Gaps = 15/173 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + G K + + D V+R+ + + ++ H + ++ +
Sbjct: 16 LRRMLPLGVKLVQLRIKDQ--------PDAVVRAEIATAQALCRDHGAVLVVNDYWQAAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
DAGCD I E L I G K GV+ + + + + + + D + + V
Sbjct: 68 DAGCDWIHLGQEDLDEAD--LPAIRKAGLKLGVSTHDDDELERVLSM--DPDYVALGPVY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
P + + + +P++ + K +G I L GG++ + QAGAD++
Sbjct: 124 PTILKKMKWHQQGLPRVTEWKRRVG--DIPLVGIGGMSVERAPGVFQAGADIV 174
>gi|289675778|ref|ZP_06496668.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
syringae FF5]
gi|330895560|gb|EGH27870.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 205
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENTQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|327401897|ref|YP_004342736.1| Tryptophan synthase subunit alpha [Archaeoglobus veneficus SNP6]
gi|327317405|gb|AEA48021.1| Tryptophan synthase alpha chain [Archaeoglobus veneficus SNP6]
Length = 254
Score = 45.2 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 69/176 (39%), Gaps = 17/176 (9%)
Query: 53 VIRSLRSYSDSVFDCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTI 106
++R R +SD + + D + + ADAG + L
Sbjct: 74 IVRQFREHSDKPV-VLMTYYNPVYAKGVDEFVKLAADAGVSGMIVVDLPLEESGEYLAAC 132
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPKIRQAKAL 164
G T P TP L + + + + G G +++ +++AK +
Sbjct: 133 EKHGIDTVFLAAPNTPDERLRAIDEASSAFVYLISLYGTTGAREKIPPLAFDLLKRAKRI 192
Query: 165 IGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFN--QKGEISYAKRLNDL 216
K G GV+ +++ LV+AGAD +VVGS+ ++ + A+RL ++
Sbjct: 193 CTKPVCV----GFGVSKREHVEELVKAGADGVVVGSALVKIIEEYGENAAERLEEI 244
>gi|66047568|ref|YP_237409.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
syringae B728a]
gi|75500580|sp|Q4ZNA1|THIE_PSEU2 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|63258275|gb|AAY39371.1| Thiamine monophosphate synthase [Pseudomonas syringae pv. syringae
B728a]
gi|330953001|gb|EGH53261.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae Cit 7]
gi|330969460|gb|EGH69526.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 205
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENTQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|320353981|ref|YP_004195320.1| thiamine-phosphate diphosphorylase [Desulfobulbus propionicus DSM
2032]
gi|320122483|gb|ADW18029.1| thiamine-phosphate diphosphorylase [Desulfobulbus propionicus DSM
2032]
Length = 218
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILED-VIDEIDMILIMTVNPGFGGQQLI----E 152
H+ + I + G ++ V ++D V E + + V+P F
Sbjct: 85 HLGQRDMDIRDARRLAGSSLLIGISVESVDDAVRAEAEGADYVGVSPVFATPTKSDTAPP 144
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAK 211
+ I+ +A + S+ L GG+ + N ++++AGAD + VV S+ + A+
Sbjct: 145 LGLAGIQAIRAAV---SLPLVAIGGINADNAAAIIRAGADGVAVV-SAIVSAACPAQAAR 200
Query: 212 RLND 215
L +
Sbjct: 201 TLKE 204
>gi|238789469|ref|ZP_04633254.1| hypothetical protein yfred0001_9110 [Yersinia frederiksenii ATCC
33641]
gi|238722419|gb|EEQ14074.1| hypothetical protein yfred0001_9110 [Yersinia frederiksenii ATCC
33641]
Length = 279
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG-------------KKTGVAINPET 121
+ I +IA +G D + H S ++ + H G G+A
Sbjct: 122 EQDILLIAQSGADGLHTHKSSFEDLKELVDLAHKYGLTVDAYIGHPSDLHTFGIAAETPA 181
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
VA + ++ +DMI +MT G I I ++ AL+G S+ +GG+
Sbjct: 182 DVAAVAKKMEALGVDMIGLMTGMSYEGVTAGDIPEAIK--QRLLALVGAVSVPTLAEGGI 239
Query: 179 TSRNIKSLVQAGADLLVVGSSF 200
N K+ G ++LVVG++
Sbjct: 240 NLENAKAFKDTGVNILVVGTAI 261
>gi|169823900|ref|YP_001691511.1| thiamine-phosphate pyrophosphorylase [Finegoldia magna ATCC 29328]
gi|167830705|dbj|BAG07621.1| thiamine-phosphate pyrophosphorylase [Finegoldia magna ATCC 29328]
Length = 212
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 5/130 (3%)
Query: 86 CDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF 145
CD+ H + R + K G++ + T LE D I + + P F
Sbjct: 80 CDVDGVHLGQKDMPIKYAREMLGDDKIIGISCH--TLEQALEAQEAGADYIGVGAIFPTF 137
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
G + TI +++ I + + GG+ NI+ + + D + + S+ F+
Sbjct: 138 TGDDFLMVTIDTLKEISEKI---HVPITAIGGINKNNIRMIFDSNVDSVSLTSAVFSTGD 194
Query: 206 EISYAKRLND 215
+ + L
Sbjct: 195 VAASTQELKQ 204
>gi|183222073|ref|YP_001840069.1| thiamine-phosphate pyrophosphorylase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912137|ref|YP_001963692.1| thiamine monophosphate synthase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|238687786|sp|B0SE83|THIE_LEPBA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|238687815|sp|B0SMR9|THIE_LEPBP RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|167776813|gb|ABZ95114.1| Thiamine monophosphate synthase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780495|gb|ABZ98793.1| Thiamine-phosphate pyrophosphorylase [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 210
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ L K I + GG+ N K ++ AGAD++ V S+ + K L +
Sbjct: 154 VRWLKEKTDIPVVAIGGINISNAKDVIGAGADMIAVVSAICSAKNPKEATVALRN 208
>gi|224003777|ref|XP_002291560.1| thiaminephosphate pyrophosphorylase thiamine phosphate synthase
[Thalassiosira pseudonana CCMP1335]
gi|220973336|gb|EED91667.1| thiaminephosphate pyrophosphorylase thiamine phosphate synthase
[Thalassiosira pseudonana CCMP1335]
Length = 193
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 17/153 (11%)
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
HL I+ H +AG D H L I + G GV+ + + ++
Sbjct: 52 VHLWIND---HWKEAIEAG-DCFGIHLGQEDMAACGLEKIRSAGLAFGVSTHSYSELSAA 107
Query: 127 EDVIDEIDMILIMTVNPGFGGQ----QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSR 181
V +++ P F + + +RQ + LI +I L GG+ +
Sbjct: 108 LGVYPSY-----ISLGPVFQTASKDVKFDPQGLETVRQWRRLIPA-NIPLVAIGGISNAD 161
Query: 182 NIKSLVQAGADL-LVVGSSFFNQKGEISYAKRL 213
K + +AGA+ V+G + K + L
Sbjct: 162 IAKVVREAGAECAAVIG-AVTKAKDVKQSVEDL 193
>gi|152971484|ref|YP_001336593.1| putative hexulose 6 phosphate synthase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|150956333|gb|ABR78363.1| putative hexulose 6 phosphate synthase [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
Length = 211
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 79 NIIADAGCDIITF-HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI--DM 135
++ DAG D +T I+ +R GK+ V + + +++E DM
Sbjct: 71 QMLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADM 130
Query: 136 ILIMT-VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + T + G++ I+ I ++ + + V GG++S+ +K G D++
Sbjct: 131 LAVHTGTDQQAAGRKPIDDLITMLKARRKA------RIAVAGGISSQTVKDYALLGPDVV 184
Query: 195 VVGSSFFNQKGEISYAKRL 213
+VGS+ + A+++
Sbjct: 185 IVGSAITHSADPADEARKI 203
>gi|313904375|ref|ZP_07837752.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Eubacterium cellulosolvens 6]
gi|313470711|gb|EFR66036.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Eubacterium cellulosolvens 6]
Length = 268
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
I+ +NP E T+ QAKA +G S L++ GG+ + N ++AGA ++V
Sbjct: 55 HIILLNPPSSE--YYEETLE---QAKAALGAWSGGLQIGGGIHADNAAEFLEAGASHVIV 109
Query: 197 GSSFFNQKGEISYAKRLNDLKKSALAID 224
S F G+ISY + L L +SA+ +
Sbjct: 110 TSYVFK-NGQISY-ENLEKL-ESAVGKE 134
>gi|313673485|ref|YP_004051596.1| modd protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312940241|gb|ADR19433.1| modD protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 279
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ I KI + + I +++ + V GG+ N++ + GAD++V SS + K
Sbjct: 215 KWSIEDIEKIVRYRNSIKSKTL-IAVAGGINMENVRQFSKTGADIIVT-SSLYWSK 268
>gi|71735379|ref|YP_276499.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289625802|ref|ZP_06458756.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289648414|ref|ZP_06479757.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298489009|ref|ZP_07007032.1| Thiamin-phosphate pyrophosphorylase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|123635053|sp|Q48DP2|THIE_PSE14 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|71555932|gb|AAZ35143.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298156507|gb|EFH97604.1| Thiamin-phosphate pyrophosphorylase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322680|gb|EFW78773.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330535|gb|EFW86514.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330867197|gb|EGH01906.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330871085|gb|EGH05794.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330882983|gb|EGH17132.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 205
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENAQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|327401558|ref|YP_004342397.1| 3-hexulose-6-phosphate synthase [Archaeoglobus veneficus SNP6]
gi|327317066|gb|AEA47682.1| 3-hexulose-6-phosphate synthase [Archaeoglobus veneficus SNP6]
Length = 430
Score = 45.2 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 21/216 (9%)
Query: 13 AADFSRLGEEIS---NITKAGAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDCH 68
A D L + + GA I P I S G + IR ++
Sbjct: 9 ALDLLELKRAVEIAGEALEGGADWIEV------GTPLIKSEGMNAIREIKRSYGCTVVAD 62
Query: 69 LMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGV-AINPETPVAI 125
+ + S + + A +G DI+ SS I +LR G K V IN P+
Sbjct: 63 MKTVDVGSVEVEMAAKSGADIVVVLALSSDSTIGEALRAARKYGCKLMVDLINHPNPLER 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIE-STIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
++V + D I + V + KI + + ++ + V GG+ +
Sbjct: 123 AKEVEEFADYINVH-VGIDQQMLGFDPVEIMEKIVR------EVNVPVAVAGGLDAEKAA 175
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V GA +++VGS+ + S A+++ + +A
Sbjct: 176 FCVSKGASIVIVGSNVIKSRDVRSAARKVREAIDAA 211
>gi|78044820|ref|YP_359600.1| thiamine-phosphate pyrophosphorylase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996935|gb|ABB15834.1| putative thiamine-phosphate pyrophosphorylase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 364
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ I++ K + + + GG+ + +++AGAD + V S+ F +
Sbjct: 296 PCGVEVIQKLKEEFPNSPV-IAI-GGIDREKVFEVIRAGADGIAVISAVFGAESPARAVY 353
Query: 212 RLND 215
L +
Sbjct: 354 ELRE 357
>gi|219852710|ref|YP_002467142.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanosphaerula palustris E1-9c]
gi|219546969|gb|ACL17419.1| Dimethylmenaquinone methyltransferase [Methanosphaerula palustris
E1-9c]
Length = 428
Score = 45.2 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 82/213 (38%), Gaps = 23/213 (10%)
Query: 13 AADFSRLGEEISNITKA---GAKQIHFDVMDGCFVPNI-SFGADVIRSLR-SYSDSVFDC 67
A D L ++ +A GA I P I S G + +R+LR +
Sbjct: 9 ALDLLELPRALAIADEAVQGGADWI------EAGTPLIKSEGMEAVRALRDRFPTHPIVA 62
Query: 68 HLMISSIDSH-INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
+ I+ + + + A AG I+ ++ +R + G+ + + + ++
Sbjct: 63 DMKIADTGTIEVEMAAKAGASIVCILGDADD---VVIREAVRAARLYGIRLMAD-LINVV 118
Query: 127 EDVIDEIDM----ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN 182
+ V ++ + I+ + G Q + +I +RQ + ++ + V GG+ +
Sbjct: 119 DPVGRSAELAGLGVTIINAHVGIDQQMIGRQSIDLLRQIRET---TTVQIAVAGGLDAVT 175
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V+ GAD+++VG A R+
Sbjct: 176 AAETVRHGADIVIVGGGIIRSGDVTGAATRVRA 208
>gi|330987624|gb|EGH85727.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 205
Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I Q +A + + + V GG+T N LV+ GADLL V F + +R
Sbjct: 143 LDLIAQVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHGLFGAENAQEVTRRAK 199
Query: 215 DL 216
Sbjct: 200 AF 201
>gi|297172359|gb|ADI23334.1| thiamine monophosphate synthase [uncultured Oceanospirillales
bacterium HF0770_27O18]
Length = 218
Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
+++ +R+A+ S+ L GGV N + L++AGAD LV
Sbjct: 144 PASLDTLREARRRF---SLPLVAIGGVNPHNARQLIEAGAD-LVA 184
>gi|297172797|gb|ADI23761.1| thiamine monophosphate synthase [uncultured Oceanospirillales
bacterium HF4000_43P14]
Length = 218
Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
+++ +R+A+ S+ L GGV N + L++AGAD LV
Sbjct: 144 PASLDTLREARRRF---SLPLVAIGGVNPHNARQLIEAGAD-LVA 184
>gi|330963488|gb|EGH63748.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 205
Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRAKV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENTQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|319955412|ref|YP_004166679.1| 3-hexulose-6-phosphate synthase [Cellulophaga algicola DSM 14237]
gi|319424072|gb|ADV51181.1| 3-hexulose-6-phosphate synthase [Cellulophaga algicola DSM 14237]
Length = 209
Score = 44.8 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 29/62 (46%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I+ + +++ + GGV ++I ++ AG + V G++ + + AK L L
Sbjct: 148 IQVLIDEAARAGVAVSIAGGVNLKSIAAVKNAGVIVAVAGAAIYGAEDPAKAAKELQALA 207
Query: 218 KS 219
+
Sbjct: 208 MA 209
>gi|305664106|ref|YP_003860394.1| tryptophan synthase, alpha chain [Ignisphaera aggregans DSM 17230]
gi|304378675|gb|ADM28514.1| tryptophan synthase, alpha chain [Ignisphaera aggregans DSM 17230]
Length = 243
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 17/188 (9%)
Query: 42 CFVPNISFG-ADVIRSLRSYSDSVFDC----HLMISSIDSHINIIADAGCDIITFHPESS 96
+V ++S +++ D + + + + G D I F
Sbjct: 54 RYVKSLSIDVWRILKETVKIVDIPIILLTYLEEYVDNYRQFLENVYSIGIDSILFPDLLI 113
Query: 97 PHIRRSLRTI---HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
+ R + I ++G K + + P P +E++ L + P G I
Sbjct: 114 DLVDRYIEYIDIAKSIGIKIVLFVTPSMPDKFIENISPLSSHFLYYGIRPTTG----IPI 169
Query: 154 TIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSF---FNQKGEISY 209
I K + G L V G G++ I +V+AGAD + +GS+
Sbjct: 170 PITSSTLVKRIRGFVRNKLVV-GFGLSIDEIADVVRAGADGIAIGSAIIEKLESNDFDGA 228
Query: 210 AKRLNDLK 217
K + D++
Sbjct: 229 LKLIEDIR 236
>gi|91776007|ref|YP_545763.1| orotidine 5'-phosphate decarboxylase [Methylobacillus flagellatus
KT]
gi|91709994|gb|ABE49922.1| 3-hexulose-6-phosphate synthase [Methylobacillus flagellatus KT]
Length = 209
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+ + V GGV +K + AGA ++V G++ +
Sbjct: 160 GLEVSVAGGVKPATVKQVKDAGATIIVAGAAIYG 193
>gi|54293784|ref|YP_126199.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
str. Lens]
gi|53753616|emb|CAH15074.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
str. Lens]
Length = 280
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 12/107 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + ++ K V I ET + E + D IL+
Sbjct: 168 HIKACGSVAHAINLARKTDKHLLVEIEVETLEELQEALDAHPDRILL---------DNFT 218
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ + QA + + LE GG+ NI + Q G D + VGS
Sbjct: 219 QDMLE---QAVKMNHPKYCELEASGGININNIADIAQTGVDFISVGS 262
>gi|330507450|ref|YP_004383878.1| bifunctional enzyme fae/hps [Methanosaeta concilii GP-6]
gi|328928258|gb|AEB68060.1| bifunctional enzyme fae/hps [Methanosaeta concilii GP-6]
Length = 395
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 153 STIPKIRQAKALIGK-RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I KAL + R + + V GG+ + + + AGAD+LVVG + + A+
Sbjct: 316 HAWQNIPDIKALAEEGRRLLVAVAGGIRTDTEGAALAAGADILVVGRAITRSRDIRDMAE 375
Query: 212 R-LNDLKKSAL 221
+ L LK++ +
Sbjct: 376 QFLTGLKQTEI 386
>gi|294495878|ref|YP_003542371.1| 3-hexulose-6-phosphate synthase [Methanohalophilus mahii DSM 5219]
gi|292666877|gb|ADE36726.1| 3-hexulose-6-phosphate synthase [Methanohalophilus mahii DSM 5219]
Length = 416
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 20/199 (10%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDCHLM--ISSIDSHIN 79
K G I P I S G D IR+LR M + +
Sbjct: 10 AKEAVKGGIDWIEI------GTPLIKSEGMDAIRTLRKNFPEHTIVADMKIADTGSLEVE 63
Query: 80 IIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV-IDE--IDMI 136
+ A AG DI+ + + +A TP + V +D +D+I
Sbjct: 64 MAAKAGADIVMVMATADDSTIKDALLAAQKYGVRLMADLISTPKPVQRAVELDRIGVDII 123
Query: 137 LI-MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
I M ++ G+ ++ + +A + V GG+ + V+AGAD+++
Sbjct: 124 NIHMGIDQQMTGKTPVDLVFEVASKTRA-------DIAVAGGLDEQTAARSVEAGADIVI 176
Query: 196 VGSSFFNQKGEISYAKRLN 214
VG + +K++
Sbjct: 177 VGGNIIRSDNVTEASKKIR 195
>gi|330960143|gb|EGH60403.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 205
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRAKV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENTQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|312136796|ref|YP_004004133.1| 3-hexulose-6-phosphate synthase [Methanothermus fervidus DSM 2088]
gi|311224515|gb|ADP77371.1| 3-hexulose-6-phosphate synthase [Methanothermus fervidus DSM 2088]
Length = 404
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 156 PKIRQAKALIGKRSIS------LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
KI + + I + V GG+T N++ +++GAD++VVG K
Sbjct: 320 EKIGEVTEWGNIKRIKSITNALVAVAGGITPDNVQKAIKSGADIIVVGRYITGSKDVRRA 379
Query: 210 AKRLND 215
++ D
Sbjct: 380 SQEFLD 385
>gi|320450253|ref|YP_004202349.1| thiamine-phosphate pyrophosphorylase [Thermus scotoductus SA-01]
gi|320150422|gb|ADW21800.1| thiamine-phosphate pyrophosphorylase [Thermus scotoductus SA-01]
Length = 206
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+R A+ +G+R GG+T N+ +++AGA +VV + + + A+ +
Sbjct: 145 VRWARENLGERPW--YAIGGITLENLGEVLEAGARRVVVVRAILDAENPERAAQAFRE 200
>gi|161484712|ref|NP_578768.2| geranylgeranylglyceryl phosphate synthase-like protein [Pyrococcus
furiosus DSM 3638]
gi|31563188|sp|Q8U213|GGGPS_PYRFU RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
Length = 251
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 37/128 (28%)
Query: 127 EDVIDEIDMILIMTVNPG-----FGGQQLIESTIPKIRQAKALIGKR------------- 168
+ ++ I M I V PG G + I PKI A AL G+
Sbjct: 121 KYNLEPIPMAYI-IVEPGETAGWVGDAKPIPRHKPKIAAAYALAGQYLGMRLVYLEAGSG 179
Query: 169 -----------------SISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ L V GG+ + ++ LV+AGAD++V G++ +
Sbjct: 180 APQPVPETMVATVKKAIDVPLIVGGGIRSGEQVRKLVKAGADIIVTGTAIESAGSIEEAR 239
Query: 211 KRLNDLKK 218
K+L DL++
Sbjct: 240 KKLEDLRR 247
>gi|14520674|ref|NP_126149.1| tryptophan synthase subunit alpha [Pyrococcus abyssi GE5]
gi|14423983|sp|Q9V1G9|TRPA_PYRAB RecName: Full=Tryptophan synthase alpha chain
gi|5457890|emb|CAB49380.1| trpA tryptophan synthase, subunit alpha (EC 4.2.1.20) [Pyrococcus
abyssi GE5]
Length = 248
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 15/176 (8%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSIDS-----HINIIADAGCDIITFHPESSPHIRRSLRT 105
+++R R +SD + + I D+G D + H L
Sbjct: 69 FNIVREFRKHSDVPIVLMTYYNPVFRVGLREFIGKAKDSGVDGMLIVDLPVMHASEFLEV 128
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPKIRQAKA 163
G KT P TP L+++ + + G G ++ E+ +++AK
Sbjct: 129 AREEGIKTVFLAAPNTPDERLKEIDKASTGFVYLISLYGTTGARDKIPETAFNLLKRAKR 188
Query: 164 LIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFN--QKGEISYAKRLND 215
+ + + V G GV+ +++ L+ AGA+ +VVGS+ N + + ++L +
Sbjct: 189 ICKNK---VAV-GFGVSKREHVEMLLNAGANGVVVGSALINIIAEHGENAEEKLRE 240
>gi|330887924|gb|EGH20585.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv. mori
str. 301020]
Length = 205
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I + +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIARVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENAQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|313901816|ref|ZP_07835238.1| Quinolinate phosphoribosyl transferase [Thermaerobacter
subterraneus DSM 13965]
gi|313467898|gb|EFR63390.1| Quinolinate phosphoribosyl transferase [Thermaerobacter
subterraneus DSM 13965]
Length = 363
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 158 IRQAKALIGKRSI-SLEVD--GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+R+ KA + + ++V GG+T I L +AGAD VGS + + +
Sbjct: 279 VREVKARLAQAGFGHVQVIVSGGITPDRIPPLREAGADAFGVGSYV-SAAPPVDMTMDIK 337
Query: 215 DLK 217
++
Sbjct: 338 EVA 340
>gi|330976857|gb|EGH76888.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 173
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I Q +A + + + V GG+T N LV+ GADLL V F + +R
Sbjct: 111 LDLIAQVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHGLFGAENTQEVTRRAK 167
Query: 215 DL 216
Sbjct: 168 AF 169
>gi|330873555|gb|EGH07704.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 205
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q +A + + + V GG+T N LV+ GADLL V G F +R
Sbjct: 143 LDLIAQVRAKV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGADNTQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|270159860|ref|ZP_06188516.1| nicotinate-nucleotide pyrophosphorylase [Legionella longbeachae
D-4968]
gi|289165385|ref|YP_003455523.1| nicotinate-nucleotide pyrophosphorylase [Legionella longbeachae
NSW150]
gi|269988199|gb|EEZ94454.1| nicotinate-nucleotide pyrophosphorylase [Legionella longbeachae
D-4968]
gi|288858558|emb|CBJ12439.1| nicotinate-nucleotide pyrophosphorylase [Legionella longbeachae
NSW150]
Length = 280
Score = 44.8 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + +++ K V I ET + E ++ + D I++
Sbjct: 168 HIKACGSVAQAISLARQTHKNILVEIEVETLDELHEAILVQPDRIML---------DNFS 218
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ I++A + + +LEV GGVT NI + Q G D + VG
Sbjct: 219 QEM---IKKAIEMNQPKHSTLEVSGGVTLENIGEIAQLGVDFISVG 261
>gi|257482201|ref|ZP_05636242.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|331011334|gb|EGH91390.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 205
Score = 44.8 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I + +A + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIARVRARV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAENAQEVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|255579675|ref|XP_002530677.1| phosphomethylpyrimidine kinase, putative [Ricinus communis]
gi|223529770|gb|EEF31708.1| phosphomethylpyrimidine kinase, putative [Ricinus communis]
Length = 546
Score = 44.4 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 30/155 (19%)
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV 141
CD H S R+ R + K GV+ TP + ID D I V
Sbjct: 401 VALACDADGVHVGQSDIPARTARILLGPDKIIGVSCK--TPEQAQQAWIDGADYIGCGGV 458
Query: 142 NP----------GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG- 190
P GF G KA+ + + GG+ + N S++++G
Sbjct: 459 YPTTTKANNSTVGFDG-------------LKAVCLASKLPVVAIGGINATNAVSVMESGV 505
Query: 191 AD---LLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
A+ + VV S+ F+++ + + L+ + A +
Sbjct: 506 ANLKGVAVV-SALFDKESVLDATRNLHAILTEAAS 539
>gi|222106880|ref|YP_002547671.1| thiamine-phosphate pyrophosphorylase protein [Agrobacterium vitis
S4]
gi|221738059|gb|ACM38955.1| thiamine-phosphate pyrophosphorylase protein [Agrobacterium vitis
S4]
Length = 203
Score = 44.4 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 7/140 (5%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
+R+ + ++ H I+ + + D GCD I H + + I A +
Sbjct: 39 LRAHIRTAKAICQVHDCQLIINDYWQVALDEGCDFI--HLGQEDLAQADVAAIRAAHARL 96
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISL 172
G++ + E + + D + + + P Q + +PK+ KA IG I +
Sbjct: 97 GISTHDEAELETALAAMP--DYVALGPIWPTVLKQMKWAPQGLPKLSTWKATIG--DIPI 152
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
GGVT+ + + GAD
Sbjct: 153 VAIGGVTAERLDDVFSHGAD 172
>gi|253995686|ref|YP_003047750.1| Orotidine 5'-phosphate decarboxylase [Methylotenera mobilis JLW8]
gi|253982365|gb|ACT47223.1| Orotidine 5'-phosphate decarboxylase [Methylotenera mobilis JLW8]
Length = 220
Score = 44.4 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+ + V GGV + + AGA ++V G++ +
Sbjct: 155 GLEISVAGGVKAATTAQVRDAGATIIVAGAAIYG 188
>gi|114776402|ref|ZP_01451447.1| thiamine-phosphate pyrophosphorylase [Mariprofundus ferrooxydans
PV-1]
gi|114553232|gb|EAU55630.1| thiamine-phosphate pyrophosphorylase [Mariprofundus ferrooxydans
PV-1]
Length = 211
Score = 44.4 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+P++ +A+ L + GG+ NI + AGAD V S F A RL
Sbjct: 148 LPRLIKARELF--PDADICAIGGINLSNIVQIKAAGADCAAVISGLFAADDIELTAARLV 205
Query: 215 DLKKSA 220
L +A
Sbjct: 206 ALWDAA 211
>gi|330509009|ref|YP_004385437.1| thiamine-phosphate pyrophosphorylase [Methanosaeta concilii GP-6]
gi|328929817|gb|AEB69619.1| thiamine-phosphate pyrophosphorylase [Methanosaeta concilii GP-6]
Length = 199
Score = 44.4 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 12/130 (9%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF----G 146
H + ++ R + GV ++ ++ E ++ + D + V+P F
Sbjct: 77 VHLGQTDMPCKTAREMLGEEMIIGVTVH-----SLFEALVAKRDGADYLGVSPIFQTATK 131
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
+ I I + + I I++ GG+ N ++ AGAD L S
Sbjct: 132 SDAGKPAGIALIEEIRRKIDIPLIAI---GGINLSNAPEVIGAGADGLCAISCVVESDDV 188
Query: 207 ISYAKRLNDL 216
+ KR DL
Sbjct: 189 SAQIKRFQDL 198
>gi|20091546|ref|NP_617621.1| thiamine-phosphate pyrophosphorylase [Methanosarcina acetivorans
C2A]
gi|24212484|sp|Q8TMD6|THIE_METAC RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|19916702|gb|AAM06101.1| thiamine-phosphate pyrophosphorylase [Methanosarcina acetivorans
C2A]
Length = 228
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS----YAKRL 213
I++ K I I + GG+ N +V+ GAD V S+ + + +
Sbjct: 163 IKEVKNAIK---IPVVAIGGINRENCIPVVENGADSFVAISAVVCSDDVKRETRKFIEII 219
Query: 214 NDLKKS 219
++K S
Sbjct: 220 REIKNS 225
>gi|62738756|pdb|1YTD|A Chain A, Crystal Structure Of A Nicotinate
Phosphoribosyltransferase From Thermoplasma Acidophilum,
Native Structure
gi|62738757|pdb|1YTE|A Chain A, Crystal Structure Of A Nicotinate
Phosphoribosyltransferase From Thermoplasma Acidophilum,
Phosphoribosylpyrophosphate Bound Structure
gi|62738758|pdb|1YTK|A Chain A, Crystal Structure Of A Nicotinate
Phosphoribosyltransferase From Thermoplasma Acidophilum
With Nicotinate Mononucleotide
gi|114794692|pdb|2I1O|A Chain A, Crystal Structure Of A Nicotinate
Phosphoribosyltransferase From Thermoplasma Acidophilum
Length = 398
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 158 IRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
IR+ + AL G+ I + V GG+ +K L +AGA+ VG+S
Sbjct: 256 IREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAEAFGVGTSI 301
>gi|16082162|ref|NP_394603.1| nicotinate phosphoribosyltransferase [Thermoplasma acidophilum DSM
1728]
gi|10640457|emb|CAC12271.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 392
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 158 IRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
IR+ + AL G+ I + V GG+ +K L +AGA+ VG+S
Sbjct: 250 IREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAEAFGVGTSI 295
>gi|73671053|ref|YP_307068.1| tryptophan synthase subunit alpha [Methanosarcina barkeri str.
Fusaro]
gi|121723312|sp|Q465F4|TRPA_METBF RecName: Full=Tryptophan synthase alpha chain
gi|72398215|gb|AAZ72488.1| tryptophan synthase, alpha chain [Methanosarcina barkeri str.
Fusaro]
Length = 263
Score = 44.4 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 48/236 (20%), Positives = 83/236 (35%), Gaps = 35/236 (14%)
Query: 11 ILAADFS--RLGEEISNITKAGAKQI-----HFD-VMDGCFVP-----NISFGADVIRSL 57
++A D S + GE + + GA I D V DG + +++ G D R
Sbjct: 25 VMAGDPSAEKTGEIVKALVNGGADIIELGFPFSDPVADGPTIQVAGQRSLAAGMDTQRYF 84
Query: 58 RSYSDSVFDCHLMIS---SI------DSHINIIADAGCDIITFH---PESSPHIRRSLRT 105
+ L+ + + + ADAG + E + ++ S
Sbjct: 85 ELIKNLDVGIPLVCMTYYNPVFRYGVEKFVEKAADAGISGLIVPDIPVEEAADLKNSCEK 144
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
G I P T ++ +++ L + G G E R+ + +
Sbjct: 145 ---HGLDLIFLIAPTTTEGRVQKILERGSGFLYLVSRLGVTGA--REDVSSSTRELLSRV 199
Query: 166 GKRSISLEVDG-GV-TSRNIKSLVQAGADLLVVGSSFFNQKGE-ISYAKRLNDLKK 218
+ + V G G+ T + AGAD ++VGS+F E +RL L K
Sbjct: 200 -ETGLPKAV-GFGISTGEQAAEVRDAGADAVIVGSAFVKIIDEGKDVNERLEALAK 253
>gi|145220295|ref|YP_001131004.1| modD protein [Prosthecochloris vibrioformis DSM 265]
gi|145206459|gb|ABP37502.1| modD protein [Chlorobium phaeovibrioides DSM 265]
Length = 283
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
E+ ++ +A+ I + GG+T N + G D++V+ S +F + +I+ A
Sbjct: 223 ETLTELVQAIRAI--APGIKISAAGGITPENAAAYAATGIDIIVLSSVYFGKPSDIAAA 279
>gi|297583404|ref|YP_003699184.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Bacillus selenitireducens MLS10]
gi|297141861|gb|ADH98618.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Bacillus selenitireducens MLS10]
Length = 247
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADL 193
+ ++ ++ GQ + IR A+ L ++V GG+ N+K+ + AG D
Sbjct: 49 WVHMVDLDGAKKGQPVNHE--EVIRAAREL----DCKIQVGGGIRNRDNVKTYLDAGVDR 102
Query: 194 LVVGSSFFNQKG 205
+++GS+ +
Sbjct: 103 VILGSAAISDPD 114
>gi|58038500|ref|YP_190464.1| thiamin-phosphate pyrophosphorylase [Gluconobacter oxydans 621H]
gi|58000914|gb|AAW59808.1| Thiamin-phosphate pyrophosphorylase [Gluconobacter oxydans 621H]
Length = 206
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ + G + + PE L I G + G++ T + + + D
Sbjct: 63 RYWQTAIELGYEWLHLGPEDLETAD--LNAIRTAGIRFGIST--HTHEELQTALACKPDY 118
Query: 136 ILIMTVNPGFGGQ----QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+ + P + Q L + K+ + + L G ++ L GG+T + ++AGA
Sbjct: 119 V---SFGPVWSTQLRGVPLTGRGLEKLAEWRGLCG--NVPLVAIGGITVPRLAECLEAGA 173
Query: 192 DLLVVGSSFFNQKGEISYAKRLND 215
D + V S F + +R D
Sbjct: 174 DTVAVMSDFIGHQDPEGQVRRWLD 197
>gi|21227381|ref|NP_633303.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanosarcina mazei Go1]
gi|74525136|sp|Q8PXE1|FAEHP_METMA RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|20905742|gb|AAM30975.1| conserved protein [Methanosarcina mazei Go1]
Length = 392
Score = 44.4 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 11/175 (6%)
Query: 49 FGADVIRSLRS-YSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRT 105
+G DVI +R D+ L + ++ADA D I + I + +
Sbjct: 212 YGTDVISKIRQVRPDAFIVADLKTLDTGNLEARMVADAAGDAIVVSALAPISTIDKLIEE 271
Query: 106 IHAMGKKTGV-AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
H G + +N + P+++L+ + D+I + G E I + K +
Sbjct: 272 AHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELH-RGIDIEG---TEHAWGNIGEIKKI 327
Query: 165 IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKK 218
K + V GGV + + GAD+LVVG + N K A++ +N L K
Sbjct: 328 APK--ALVAVAGGVRLDKVPVALSQGADILVVGRAITNAKDVREMAEQFINSLNK 380
>gi|319408258|emb|CBI81911.1| thiamine-phosphate pyrophosphorylase [Bartonella schoenbuchensis
R1]
Length = 201
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 19/180 (10%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
AD+ + + G K I + NI I+ ++ D L+I+
Sbjct: 12 NADW------VERLVPLGVKLIQLRMK----NKNIEIINHHIKRAKNICDKF-GAQLVIN 60
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ I D CD I E + + I G K G++ + E + I E
Sbjct: 61 D---YWEIAIDEKCDFIHLGQEDLCNAD--IPAIRKNGIKFGLSTHDEHELDISMSFSPE 115
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ L + + KI+Q K IG + L GG+T +++AGA+
Sbjct: 116 Y-IALGPIYPTILKKMKWAPQGLEKIKQWKKRIGA--LPLVGIGGLTPERAIDVLEAGAN 172
>gi|218706138|ref|YP_002413657.1| putative 3-hexulose-6-phosphate synthase from bacteriophage origin
[Escherichia coli UMN026]
gi|293406142|ref|ZP_06650068.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Escherichia
coli FVEC1412]
gi|298381877|ref|ZP_06991474.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Escherichia
coli FVEC1302]
gi|218433235|emb|CAR14134.1| putative 3-hexulose-6-phosphate synthase from bacteriophage origin
[Escherichia coli UMN026]
gi|291426148|gb|EFE99180.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Escherichia
coli FVEC1412]
gi|298277017|gb|EFI18533.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Escherichia
coli FVEC1302]
Length = 211
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 79 NIIADAGCDIITF-HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI--DM 135
++ DAG D +T I+ + GK+ V + + +++E DM
Sbjct: 71 QLLFDAGADYVTVLGVTDLLTIQSCICAAKEAGKQVVVDMICVDDLPARVRLLEEAGADM 130
Query: 136 ILIMT-VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + T + G++ I+ I ++ + + V GG++S+ +K G D++
Sbjct: 131 LAVHTGTDQQAAGRKPIDDLITMLKARRKA------RIAVAGGISSQTVKDYALLGPDVV 184
Query: 195 VVGSSFFNQKGEISYAKRL 213
+VGS+ + A+++
Sbjct: 185 IVGSAITHAADPADEARKI 203
>gi|213617503|ref|ZP_03372329.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 75
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +DG +T + SL+ G D +V GS+ F + + + K A
Sbjct: 17 IVIDGSLTQDQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 65
>gi|254438977|ref|ZP_05052471.1| KDPG and KHG aldolase subfamily [Octadecabacter antarcticus 307]
gi|198254423|gb|EDY78737.1| KDPG and KHG aldolase subfamily [Octadecabacter antarcticus 307]
Length = 210
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I +A++ K +I V GG+T + QAGAD +GS+ F Q SY L++LK
Sbjct: 142 ISAMRAVLPKEAIVAVV-GGITPETMGEYRQAGADSFGLGSALFKQ----SY--ELSELK 194
Query: 218 KSALA 222
A A
Sbjct: 195 SRAEA 199
>gi|52841043|ref|YP_094842.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|54296828|ref|YP_123197.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
str. Paris]
gi|52628154|gb|AAU26895.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|53750613|emb|CAH12020.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
str. Paris]
Length = 280
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 14/108 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQL 150
H ++ + ++ K V I ET + L++ +D D IL+
Sbjct: 168 HIKACGSVAHAISLARKTDKHLLVEIEVET-LEELQEALDAHPDRILL---------DNF 217
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ + QA + + LE GG+ NI + Q G D + VGS
Sbjct: 218 TQDMLE---QAVKMNHPKYCELEASGGININNIADIAQTGVDFISVGS 262
>gi|213419861|ref|ZP_03352927.1| ribulose-phosphate 3-epimerase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 68
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ +DG +T + SL+ G D +V GS+ F + + + K A
Sbjct: 10 IVIDGSLTQDQLPSLIAQGIDRVVSGSALFRDDRLVENTRSWRAMFKVA 58
>gi|302390189|ref|YP_003826010.1| Quinolinate phosphoribosyl transferase [Thermosediminibacter oceani
DSM 16646]
gi|302200817|gb|ADL08387.1| Quinolinate phosphoribosyl transferase [Thermosediminibacter oceani
DSM 16646]
Length = 344
Score = 44.4 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKRSIS---LEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + + + ++ + V GG+T I+ L +AGAD VGS
Sbjct: 260 VYEVRKRLDQKGYDYVKIFVSGGLTPDRIRELSEAGADAFGVGSYI 305
>gi|148360546|ref|YP_001251753.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
str. Corby]
gi|148282319|gb|ABQ56407.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
str. Corby]
Length = 280
Score = 44.0 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 14/108 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQL 150
H ++ + ++ K V I ET + L++ +D D IL+
Sbjct: 168 HIKACGSVAHAISLARKTDKHLLVEIEVET-LEELQEALDAHPDRILL---------DNF 217
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ + QA + + LE GG+ NI + Q G D + VGS
Sbjct: 218 TQDMLE---QAVKMNHPKYCELEASGGININNIADIAQTGVDFISVGS 262
>gi|307595923|ref|YP_003902240.1| orotidine 5'-phosphate decarboxylase [Vulcanisaeta distributa DSM
14429]
gi|307551124|gb|ADN51189.1| Orotidine 5'-phosphate decarboxylase [Vulcanisaeta distributa DSM
14429]
Length = 217
Score = 44.0 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 25/59 (42%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I +A + +++ + GG+ + D++VVG + ++ AK + L
Sbjct: 155 ISEAVNIKNNYGLAVAIAGGINEEVAPKIRGTNIDVVVVGRAITQSTDPVAAAKNIRRL 213
>gi|296106389|ref|YP_003618089.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
2300/99 Alcoy]
gi|295648290|gb|ADG24137.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
2300/99 Alcoy]
gi|307609601|emb|CBW99103.1| nicotinate-nucleotide pyrophosphorylase [Legionella pneumophila
130b]
Length = 280
Score = 44.0 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 12/107 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + ++ K V I ET + E + D IL+
Sbjct: 168 HIKACGSVAHAISLARKTDKHLLVEIEVETLEELQEALDAHPDRILL---------DNFT 218
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ + QA + + LE GG+ NI + Q G D + VGS
Sbjct: 219 QDMLE---QAVKMNHPKYCELEASGGININNIADIAQTGVDFISVGS 262
>gi|114321216|ref|YP_742899.1| thiamine-phosphate pyrophosphorylase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227610|gb|ABI57409.1| thiamine-phosphate diphosphorylase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 213
Score = 44.0 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + + + + GG+T+RN +V AGAD L V + F+ + A+ L
Sbjct: 156 LRRIRPRLRVPVVAIGGITARNAAPVVAAGADALAVITDVFSAPDVEAAARAYASL 211
>gi|40074227|gb|AAR39392.1| 3-hexulose-6-phosphate synthase [Bacillus methanolicus MGA3]
Length = 211
Score = 44.0 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 123 VAILEDVIDEIDM--ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V LE+ ++D + + V+ G+ Q + ++ + +++ KA++ ++ + GG+
Sbjct: 113 VKNLEERAKQVDEMGVDYICVHAGYDLQAVGKNPLDDLKRIKAVV--KNAKTAIAGGIKL 170
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ +++A DL++VG NQ + + A+++N L K L
Sbjct: 171 ETLPEVIKAEPDLVIVGGGIANQTDKKAAAEKINKLVKQGL 211
>gi|168335232|ref|ZP_02693335.1| thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase
[Epulopiscium sp. 'N.t. morphotype B']
Length = 477
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL---- 213
I + A++ +I + GG+ NIK L +A D + V S+ F + +L
Sbjct: 145 IAEVAAIVSAVNIPVVAIGGINLENIKQLKRANVDGVAVVSAIFGSDDISATCAKLLAES 204
Query: 214 NDLKKSALAI 223
+ + A A+
Sbjct: 205 EKIARMATAL 214
>gi|332159425|ref|YP_004424704.1| geranylgeranylglyceryl phosphate synthase-like protein [Pyrococcus
sp. NA2]
gi|331034888|gb|AEC52700.1| geranylgeranylglyceryl phosphate synthase-like protein [Pyrococcus
sp. NA2]
Length = 252
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+R K I I L V GG+ T ++ L +AGAD++V G++ + + KRL
Sbjct: 190 EMVRTVKLTIE---IPLIVGGGIKTGEQVRELTRAGADIIVTGTAIESARSLEEARKRLE 246
Query: 215 DLKK 218
+L+K
Sbjct: 247 NLRK 250
>gi|332799555|ref|YP_004461054.1| Quinolinate phosphoribosyl transferase domain-containing protein
[Tepidanaerobacter sp. Re1]
gi|332697290|gb|AEE91747.1| Quinolinate phosphoribosyl transferase domain-containing protein
[Tepidanaerobacter sp. Re1]
Length = 344
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKRSIS---LEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
I + + + ++ + V GG++ IK L++AGAD VGS
Sbjct: 260 IYEIRKRLDQKGYDYVKIFVSGGLSPERIKILIEAGADAFGVGSYI 305
>gi|73670762|ref|YP_306777.1| thiamine-phosphate pyrophosphorylase [Methanosarcina barkeri str.
Fusaro]
gi|121722040|sp|Q466J5|THIE_METBF RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|72397924|gb|AAZ72197.1| thiamine-phosphate diphosphorylase [Methanosarcina barkeri str.
Fusaro]
Length = 220
Score = 44.0 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
KIR+ K I + + GG+ N +S++Q GAD LV S+ AK D+
Sbjct: 157 KIREVKDAIK---LPVVAIGGINKENCESVIQNGADSLVAISAVVCSNDVKREAKYFIDM 213
>gi|295102388|emb|CBK99933.1| thiamine-phosphate diphosphorylase [Faecalibacterium prausnitzii
L2-6]
Length = 217
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ K + + + GG+ NI L +GAD + + S+ F+ + + K L L +
Sbjct: 150 RLKEICDSVDVPVVAIGGIHKDNILKLKGSGADGVALVSAIFSAEDIEAECKELKALAEQ 209
>gi|88812508|ref|ZP_01127757.1| Thiamine-phosphate diphosphorylase [Nitrococcus mobilis Nb-231]
gi|88790294|gb|EAR21412.1| Thiamine-phosphate diphosphorylase [Nitrococcus mobilis Nb-231]
Length = 211
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
A S+ + GG+T N + +V G D + V F S A+R+ L
Sbjct: 153 LAAAREVLSLPIVAIGGITPDNARRVVATGVDAVAVVRGVFGVPDPASAARRVACL 208
>gi|14521518|ref|NP_126994.1| orotidine 5'-phosphate decarboxylase [Pyrococcus abyssi GE5]
gi|20139851|sp|Q9UZ35|PYRF_PYRAB RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
gi|5458737|emb|CAB50224.1| pyrF orotidine-5'-monophosphate decarboxylase [Pyrococcus abyssi
GE5]
Length = 208
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMISSIDS----HINIIADAGCDIITFHP-------ES 95
I G D+IR L+ + L ++ I + + +AG D I HP E+
Sbjct: 36 IGSGLDIIRKLKDRTGLKIIADLKLADIPNTNKLIARKVYEAGADYIIVHPFVGRDSVEA 95
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
+ + + INP T ++ ++++ ++ PG
Sbjct: 96 VNELGEIILVVEMSHPGALEFINPLT--DKFIELANDVEPFGVIA--PGTR--------P 143
Query: 156 PKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++ + + + + + G G K ++AGAD ++VG S +N A+ +
Sbjct: 144 ERVKYIRERLKE-GVKILTPGIGAQGGKAKEAIEAGADYVIVGRSIYNAPNPREAAREIY 202
Query: 215 D 215
D
Sbjct: 203 D 203
>gi|308176451|ref|YP_003915857.1| 3-hexulose-6-phosphate synthase [Arthrobacter arilaitensis Re117]
gi|307743914|emb|CBT74886.1| 3-hexulose-6-phosphate synthase [Arthrobacter arilaitensis Re117]
Length = 207
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V GGV+ I + ++GA + V G + ++ + AK L
Sbjct: 163 VAGGVSISTIADVQKSGAQVAVAGGAIYSAEDPAQAAKELQA 204
>gi|294085540|ref|YP_003552300.1| thiamine-phosphate pyrophosphorylase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665115|gb|ADE40216.1| thiamine-phosphate pyrophosphorylase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 198
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+ D+ R + G K + + D D++R + ++ D H +
Sbjct: 12 SCDWLR------RMLPLGVKLVQLRIKD--------APLDIVRREIVEAKALCDAHGAVL 57
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
++ + +I DAGCD + E + L I G + G + + + +
Sbjct: 58 VVNDYWHIAIDAGCDWVHLGQEDMDNAD--LNAIRRAGIRLGFSTHDDDELERALGFAP- 114
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D + + V P + + + +P++ + KA IG I L GG+ + ++GA
Sbjct: 115 -DYLALGPVYPTILKKMKWHQQGLPRVTEWKARIGA--IPLVGIGGMRVDRAAGVFESGA 171
Query: 192 DLL 194
D++
Sbjct: 172 DII 174
>gi|288561387|ref|YP_003424873.1| bifunctional formaldehyde-activating enzyme/3- hexulose-6-phosphate
synthase Fae/Hps [Methanobrevibacter ruminantium M1]
gi|288544097|gb|ADC47981.1| bifunctional formaldehyde-activating enzyme/3- hexulose-6-phosphate
synthase Fae/Hps [Methanobrevibacter ruminantium M1]
Length = 412
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I++ K + G + V GG+T + + GAD+++ G A+
Sbjct: 339 IKEIKEITGGLAA---VAGGITPEKAEEAFEKGADIIIAGRYIIGSGDPRRAAE 389
>gi|282163806|ref|YP_003356191.1| thiamine-phosphate pyrophosphorylase [Methanocella paludicola
SANAE]
gi|282156120|dbj|BAI61208.1| thiamine-phosphate pyrophosphorylase [Methanocella paludicola
SANAE]
Length = 215
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
SI + V GG+ N K + AGAD L V S+ +Q AK L L K A
Sbjct: 156 SIPVIVIGGIGPDNAKESISAGADGLAVISAVVSQDDVTGAAKHLKALIKEA 207
>gi|224826774|ref|ZP_03699874.1| thiamine-phosphate pyrophosphorylase [Lutiella nitroferrum 2002]
gi|224600994|gb|EEG07177.1| thiamine-phosphate pyrophosphorylase [Lutiella nitroferrum 2002]
Length = 205
Score = 44.0 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 175 DGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKRL-NDLKK 218
GG+T+ N ++ AGAD+L V+G + F+ A++L L++
Sbjct: 161 IGGITADNAGEVISAGADMLAVIG-ALFDAADPAQTAEQLAAALRR 205
>gi|297537499|ref|YP_003673268.1| Orotidine 5'-phosphate decarboxylase [Methylotenera sp. 301]
gi|297256846|gb|ADI28691.1| Orotidine 5'-phosphate decarboxylase [Methylotenera sp. 301]
Length = 296
Score = 44.0 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+ + V GGV + + + AGA ++V G++ +
Sbjct: 160 GVDISVAGGVKAATTQQVKDAGATIIVAGAAIYG 193
>gi|74318574|ref|YP_316314.1| thiamine monophosphate synthase [Thiobacillus denitrificans ATCC
25259]
gi|123611224|sp|Q3SFU7|THIE_THIDA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|74058069|gb|AAZ98509.1| thiamine monophosphate synthase [Thiobacillus denitrificans ATCC
25259]
Length = 211
Score = 44.0 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + GG+T+ N L+ AGAD L V S+ F+ A LN L +
Sbjct: 158 LPVVAIGGITAANAAPLIDAGADSLAVLSALFDAPDVRRAAAELNRLFAA 207
>gi|296120873|ref|YP_003628651.1| thiamine-phosphate pyrophosphorylase [Planctomyces limnophilus DSM
3776]
gi|296013213|gb|ADG66452.1| thiamine-phosphate pyrophosphorylase [Planctomyces limnophilus DSM
3776]
Length = 536
Score = 43.6 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +R+ I + ++ GG+T+ N +V AGA L V S+ + A+ L
Sbjct: 474 LEYVREVAREIALPAYAI---GGITTENAADVVAAGATRLAVSSAICSANEPYDAARHLM 530
Query: 215 DLKKSA 220
++ A
Sbjct: 531 EILNGA 536
>gi|210621531|ref|ZP_03292691.1| hypothetical protein CLOHIR_00635 [Clostridium hiranonis DSM 13275]
gi|210154730|gb|EEA85736.1| hypothetical protein CLOHIR_00635 [Clostridium hiranonis DSM 13275]
Length = 223
Score = 43.6 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 74/202 (36%), Gaps = 23/202 (11%)
Query: 19 LGEEISNITKAGAKQIHF---DVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSID 75
L E++ + GA + ++ + F+ A I++L F +
Sbjct: 37 LAEQVRECLEGGATILQIREKNLPENEFLEE----AKEIQALCKEFKIPFIV-------N 85
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAM-GKKTGVAINPETPVAILEDVIDEID 134
+INI A+ D + E + + M G+ + ++ T L+ D D
Sbjct: 86 DNINIAAEIKADGVHVGQEDMD-----AKKVRDMLGENAILGVSASTVEEALKAERDGAD 140
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + V P T K + SI + GG+++ N+ L +G D +
Sbjct: 141 YLGVGAVFPTSTKGDADSVTFE---TLKEICETVSIPVVAIGGISADNLLKLKGSGIDGV 197
Query: 195 VVGSSFFNQKGEISYAKRLNDL 216
V S+ F + K+L +L
Sbjct: 198 SVISAIFASDDITAATKKLKEL 219
>gi|73663757|ref|YP_302537.1| 3-hexulose-6-phosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72496327|dbj|BAE19592.1| putative truncated 3-hexulose-6-phosphate synthase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 97
Score = 43.6 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+D++D I V+ G+ Q +S + +R+ K++I + + V GG+ IK +V
Sbjct: 7 LDDLDADYI-AVHTGYDLQAEGQSPLESLRKVKSVIS--NSKVAVAGGIKPDTIKDIVAE 63
Query: 190 GADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
DL++VG N + AK+ D+ +
Sbjct: 64 NPDLIIVGGGIANADDPVEAAKQCRDIVDA 93
>gi|114778351|ref|ZP_01453198.1| Dihydroorotate dehydrogenase 1 [Mariprofundus ferrooxydans PV-1]
gi|114551314|gb|EAU53871.1| Dihydroorotate dehydrogenase 1 [Mariprofundus ferrooxydans PV-1]
Length = 318
Score = 43.6 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 67/177 (37%), Gaps = 30/177 (16%)
Query: 42 CFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRR 101
F N A V+ ++R + L + IA+ +I E+
Sbjct: 148 HFGNNPVMAARVVEAMRPMTKKPLITKLS-----PNTADIAETARMVI----EAGTDGLS 198
Query: 102 SLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
+ T+ G+A++ E ++ ++ + G G + + KI Q
Sbjct: 199 VINTL------VGMAVDIEQRSPVIANI------------SGGLSGPAIKPVALWKIHQT 240
Query: 162 KALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+A+ K +I + GG+T +++ G+D + +G+ F + K L +++
Sbjct: 241 RAVAAKHNIPILGQGGITSAKDAIEFAIVGSDAIGLGTGLFY--DPLLCHKLLEEMR 295
>gi|314934161|ref|ZP_07841522.1| thiamine-phosphate diphosphorylase [Staphylococcus caprae C87]
gi|313653066|gb|EFS16827.1| thiamine-phosphate diphosphorylase [Staphylococcus caprae C87]
Length = 212
Score = 43.6 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
Query: 130 IDEIDMI----LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
+ ++D I + T + + I K + +G+ + + GG+ NI+
Sbjct: 125 LSQVDYIGVGPMYTTTSKDDANAPVGPHMITK---LRDYVGE--LPIVAIGGINETNIEP 179
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +AGAD + V S+ K K
Sbjct: 180 IAEAGADGVSVISAITRSKNIDKTVKHFRK 209
>gi|257791808|ref|YP_003182414.1| thiamine-phosphate pyrophosphorylase [Eggerthella lenta DSM 2243]
gi|257475705|gb|ACV56025.1| thiamine-phosphate pyrophosphorylase [Eggerthella lenta DSM 2243]
Length = 216
Score = 43.6 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 25/63 (39%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
A+ I + GG+ R I L GAD V S+ F + +RL ++A
Sbjct: 154 LAAICAAVDIPVVAIGGLNERTIPELAGTGADGAAVVSAIFAAEDIEEETRRLRAAVQAA 213
Query: 221 LAI 223
L
Sbjct: 214 LGA 216
>gi|83590670|ref|YP_430679.1| nicotinate phosphoribosyltransferase [Moorella thermoacetica ATCC
39073]
gi|83573584|gb|ABC20136.1| Quinolinate phosphoribosyl transferase [Moorella thermoacetica ATCC
39073]
Length = 346
Score = 43.6 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ ++R + G + + V GG+T I++L++AGAD VGS + I
Sbjct: 259 PELVREVRYRLDMAGFNHVGIFVSGGLTPERIRTLIEAGADAFGVGSYI-SGAAPIDMTM 317
Query: 212 RLND 215
L +
Sbjct: 318 DLKE 321
>gi|282858126|ref|ZP_06267321.1| nicotinate phosphoribosyltransferase [Pyramidobacter piscolens
W5455]
gi|282584048|gb|EFB89421.1| nicotinate phosphoribosyltransferase [Pyramidobacter piscolens
W5455]
Length = 345
Score = 43.6 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 158 IRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
IR+ + + G + + + GG+T I+ L +AGAD VGS
Sbjct: 262 IREVRYRLDMAGFKHVKIVATGGLTPERIRVLSEAGADTFGVGSYI 307
>gi|116750927|ref|YP_847614.1| thiamine-phosphate pyrophosphorylase [Syntrophobacter fumaroxidans
MPOB]
gi|116699991|gb|ABK19179.1| thiamine-phosphate pyrophosphorylase [Syntrophobacter fumaroxidans
MPOB]
Length = 223
Score = 43.6 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+A+ + L GG+ + N +++AGAD L V S+ A+ L A
Sbjct: 154 LRAIRMAVRLPLVAIGGIKAENAADVIRAGADGLAVVSAIMACPEPRVAARTLKAAIAEA 213
Query: 221 LA 222
A
Sbjct: 214 RA 215
>gi|317489816|ref|ZP_07948313.1| thiamine monophosphate synthase/TENI [Eggerthella sp. 1_3_56FAA]
gi|325829914|ref|ZP_08163372.1| thiamine-phosphate diphosphorylase [Eggerthella sp. HGA1]
gi|316911065|gb|EFV32677.1| thiamine monophosphate synthase/TENI [Eggerthella sp. 1_3_56FAA]
gi|325488081|gb|EGC90518.1| thiamine-phosphate diphosphorylase [Eggerthella sp. HGA1]
Length = 216
Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 25/63 (39%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
A+ I + GG+ R I L GAD V S+ F + +RL ++A
Sbjct: 154 LAAICAAVDIPVVAIGGLNERTIPELAGTGADGAAVVSAIFAAEDIEEETRRLRAAVQAA 213
Query: 221 LAI 223
L
Sbjct: 214 LGA 216
>gi|34557034|ref|NP_906849.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Wolinella
succinogenes DSM 1740]
gi|39931319|sp|Q7M9W9|HIS4_WOLSU RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|34482749|emb|CAE09749.1| PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE
RIBOTIDEISOMERASE [Wolinella succinogenes]
Length = 240
Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADL 193
+ I+ +N F G+ + IR+ + ++ +E+ GG+ IK V+ G D
Sbjct: 46 WLHIVDLNGAFAGE---PKNLESIRKIRESC---NLKIELGGGIRDEATIKRYVELGVDR 99
Query: 194 LVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+++GS + K + K A+ ID
Sbjct: 100 IILGSVAMKNP---EFVKEMASRYKIAVGID 127
>gi|329926229|ref|ZP_08280793.1| 3-hexulose-6-phosphate synthase domain protein [Paenibacillus sp.
HGF5]
gi|328939364|gb|EGG35719.1| 3-hexulose-6-phosphate synthase domain protein [Paenibacillus sp.
HGF5]
Length = 88
Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +++ ++ K ++ + V GG+ + ++QA DL++VG
Sbjct: 9 ICVHSGYDHQAEGKNSFEELAAIKRVVKQ--AKTAVAGGIKMETLPEVIQANPDLVIVGG 66
Query: 199 SFFNQKGEISYAKRLNDLKKSA 220
+Q + + A ++N+L K A
Sbjct: 67 GITSQTDKKATAAQMNELVKQA 88
>gi|222475636|ref|YP_002564053.1| nicotinate-nucleotide pyrophosphorylase (nadC) [Anaplasma marginale
str. Florida]
gi|255003629|ref|ZP_05278593.1| nicotinate-nucleotide pyrophosphorylase (nadC) [Anaplasma marginale
str. Puerto Rico]
gi|255004756|ref|ZP_05279557.1| nicotinate-nucleotide pyrophosphorylase (nadC) [Anaplasma marginale
str. Virginia]
gi|222419774|gb|ACM49797.1| nicotinate-nucleotide pyrophosphorylase (nadC) [Anaplasma marginale
str. Florida]
Length = 272
Score = 43.6 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I + I + + + + + E + +++I++ G I
Sbjct: 163 HIVACGSITECVSRIRRKLGDVFITVECDNKLQVEESIKSSVNLIML-----DNMGVSDI 217
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ +I I S +EV GGV NI+ + GAD + +GS
Sbjct: 218 KDSIKMI--------GNSAMVEVSGGVNLENIREIASLGADYISIGS 256
>gi|170290681|ref|YP_001737497.1| nicotinic acid phosphoribosyltransferase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174761|gb|ACB07814.1| Nicotinic acid phosphoribosyltransferase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 394
Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 158 IRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
IR+ + + G + + V GG+ +K +AGAD VGS + + + +
Sbjct: 250 IREVRWELDIRGFNHVKIFVSGGLNESTVKEFSEAGADAFGVGSHIIGAR-PVDFGMDIV 308
Query: 215 DLKKSALA 222
+++ +A
Sbjct: 309 EIEGKPIA 316
>gi|254519651|ref|ZP_05131707.1| 2-keto-3-deoxygluconate-6-phosphate aldolase [Clostridium sp.
7_2_43FAA]
gi|226913400|gb|EEH98601.1| 2-keto-3-deoxygluconate-6-phosphate aldolase [Clostridium sp.
7_2_43FAA]
Length = 203
Score = 43.6 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
GGV++ N K ++ GAD L +GSS FN+ S K + L K+ ++
Sbjct: 153 GGVSADNAKEFLENGADYLGIGSSLFNKDDVNS--KNIEALVKALKELE 199
>gi|315659083|ref|ZP_07911949.1| 3-hexulose-6-phosphate synthase [Staphylococcus lugdunensis M23590]
gi|315495894|gb|EFU84223.1| 3-hexulose-6-phosphate synthase [Staphylococcus lugdunensis M23590]
Length = 213
Score = 43.2 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H K+ V + + +D++
Sbjct: 70 DYEVSQAIKFGADVVTILGVAEDASIKAAVEEAHKHDKQLLVDMIAVQDLEKRAQELDDM 129
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R+ K++I ++ + V GG+ IK +V DL
Sbjct: 130 GADYI-AVHTGYDLQAEGQSPLDSLRKVKSVI--KNSKVAVAGGIKPDTIKEIVAENPDL 186
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + + AK+ D
Sbjct: 187 VIVGGGIANAEDPVEAAKQCRD 208
>gi|189425819|ref|YP_001952996.1| phosphomethylpyrimidine kinase [Geobacter lovleyi SZ]
gi|189422078|gb|ACD96476.1| phosphomethylpyrimidine kinase [Geobacter lovleyi SZ]
Length = 492
Score = 43.2 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
A+ + + + GG++ N +++AGAD + V SS A L L
Sbjct: 163 LAAIRDRVKLPIVAIGGISPANACRVIEAGADAVAVISSVLAAPRPEVAATELRLL 218
>gi|284038372|ref|YP_003388302.1| thiamine-phosphate pyrophosphorylase [Spirosoma linguale DSM 74]
gi|283817665|gb|ADB39503.1| thiamine-phosphate pyrophosphorylase [Spirosoma linguale DSM 74]
Length = 206
Score = 43.2 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H +R++ K G++IN + +E ++D + I T+ P G +
Sbjct: 82 VHVGQDDMPYELVRSLIGPDKIIGLSINNMAELEAVEG--ADLDYLGIATIFP--TGTKT 137
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
S++ + +A+ + S+ GG+ NI+S++QAGA V S+ Q +
Sbjct: 138 DTSSLLGLDGLRAICQQTSLPTFAIGGINVTNIQSVLQAGASGAAVVSAICGQPSPYEAS 197
Query: 211 KRLNDL 216
+ L L
Sbjct: 198 RELIHL 203
>gi|300900172|ref|ZP_07118361.1| 3-hexulose-6-phosphate synthase [Escherichia coli MS 198-1]
gi|300356287|gb|EFJ72157.1| 3-hexulose-6-phosphate synthase [Escherichia coli MS 198-1]
Length = 211
Score = 43.2 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
L +R + V GG++S+ +K G D+++VGS+ + A+++
Sbjct: 154 LKARRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPADEARKI 203
>gi|56460857|ref|YP_156138.1| tryptophan synthase subunit alpha [Idiomarina loihiensis L2TR]
gi|73622024|sp|Q5QX79|TRPA_IDILO RecName: Full=Tryptophan synthase alpha chain
gi|56179867|gb|AAV82589.1| Tryptophan synthase alpha chain [Idiomarina loihiensis L2TR]
Length = 269
Score = 43.2 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 28/204 (13%)
Query: 25 NITKAGAKQIHF-----DVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
++G H ++ D + P I G V +L + + +
Sbjct: 70 RALESGTTFKHILEILKEIRD--YSPQIPIGLLVYANL-----------IYAKGVRNFYQ 116
Query: 80 IIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM 139
+ DAG D + + +R +G + P+ A+L D+ + + +
Sbjct: 117 QMKDAGVDSVLIADVPTKEAKRFADIAKEIGIEAVFIAPPDASDALLIDIAKQCAGYVYL 176
Query: 140 TVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLV 195
G G Q+ I + K ++ G G++ +++ + AGAD +
Sbjct: 177 LSRSGVTGADTQMQAPASELINKLKEAGAPPTLL----GFGISQPEHVQRALAAGADGAI 232
Query: 196 VGSSF--FNQKGEISYAKRLNDLK 217
GS+ +K + A+++ DLK
Sbjct: 233 SGSAVVALIEKNLDNNAQQVADLK 256
>gi|170743048|ref|YP_001771703.1| thiamine-phosphate pyrophosphorylase [Methylobacterium sp. 4-46]
gi|168197322|gb|ACA19269.1| thiamine-phosphate pyrophosphorylase [Methylobacterium sp. 4-46]
Length = 233
Score = 43.2 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY-AKRLNDLKKSA 220
+A + + + + G+ S N S++ AGAD + + S+ F E+ A+ L L A
Sbjct: 167 RARLARGGLPIGAIAGIDSGNAASVIGAGADGIALISALFGAPDEVEARARALRQLVDRA 226
Query: 221 LAI 223
LA
Sbjct: 227 LAA 229
>gi|317121958|ref|YP_004101961.1| Quinolinate phosphoribosyl transferase [Thermaerobacter marianensis
DSM 12885]
gi|315591938|gb|ADU51234.1| Quinolinate phosphoribosyl transferase [Thermaerobacter marianensis
DSM 12885]
Length = 355
Score = 43.2 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKRSI---SLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+R+ KA + + + V GG+T I L +AGAD VGS
Sbjct: 271 VREVKARLAQAGFGHVKVFVSGGITPERIPPLKEAGADAFGVGSYV 316
>gi|298528943|ref|ZP_07016346.1| thiamine-phosphate pyrophosphorylase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510379|gb|EFI34282.1| thiamine-phosphate pyrophosphorylase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 214
Score = 43.2 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H + +R + K GV+IN T + + + ++D ++++P F Q
Sbjct: 85 VHIGQEDLPYQVVREMLGPDKIIGVSIN--TYDQLWQASLTDVDY---LSLSPVFPTQTK 139
Query: 151 I----ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
+ +++A+A+ GK I++ GG+ N+ ++ G D + + S+ +
Sbjct: 140 TDTKEPFGLEGLKKARAMTGKPLITI---GGINRDNLADIMATGVDGVALVSAVCSADSP 196
Query: 207 ISYAKRL-NDLKKSALAI 223
A+ L ++ + + I
Sbjct: 197 ADAARELVRIIRDNKMRI 214
>gi|52548458|gb|AAU82307.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [uncultured
archaeon GZfos13E1]
Length = 400
Score = 43.2 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
I + + G ++ + V GG+ ++ ++AGAD+LVVG + K A+
Sbjct: 328 IGAVRKVCG-NNVLVAVAGGIRVDKVEKALKAGADILVVGRAITAAKDVTGAARA 381
>gi|73668703|ref|YP_304718.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanosarcina barkeri str. Fusaro]
gi|97051922|sp|Q46DA4|HPS_METBF RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|72395865|gb|AAZ70138.1| 3-hexulose-6-phosphate synthase [Methanosarcina barkeri str.
Fusaro]
Length = 413
Score = 43.2 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 80/214 (37%), Gaps = 26/214 (12%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNI-SFGADVIRSLRS-YSDSVFDCHLMISSIDSH- 77
E GA I P I S G D IR++R + D + +
Sbjct: 6 EIAKEAIAGGADWIEI------GTPLIKSEGMDAIRTMRKAFPDRTILADMKTVDTGAIE 59
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG-VAINPETPVAILEDVIDE---- 132
+ + A AG D++ S L + + K + + + ++ V++
Sbjct: 60 VEMAAKAGADVVIV--LGSADDSTLLDALRSSHKYGVRLMADLISAPDPVKRVVELEALG 117
Query: 133 IDMILIMTVNPGFGGQQLIESTIPK--IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+D + + + + + K I + + + ++ L V GG+ + + V+AG
Sbjct: 118 VDYVNVHI--------GIDQQMMGKDPIALLREISQRVNVQLAVAGGLDANSAVQAVKAG 169
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
A +++VG + + A+++ S A++
Sbjct: 170 AKVVIVGGNITHSDNVTEAARKIRQSVDSPDAVE 203
>gi|270314285|gb|ACZ74158.1| hypothetical protein [Zea mays subsp. mays]
gi|270314287|gb|ACZ74159.1| hypothetical protein [Zea mays subsp. mays]
gi|270314289|gb|ACZ74160.1| hypothetical protein [Zea mays subsp. mays]
gi|270314291|gb|ACZ74161.1| hypothetical protein [Zea mays subsp. mays]
gi|270314293|gb|ACZ74162.1| hypothetical protein [Zea mays subsp. mays]
gi|270314295|gb|ACZ74163.1| hypothetical protein [Zea mays subsp. mays]
gi|270314297|gb|ACZ74164.1| hypothetical protein [Zea mays subsp. mays]
gi|270314299|gb|ACZ74165.1| hypothetical protein [Zea mays subsp. mays]
gi|270314301|gb|ACZ74166.1| hypothetical protein [Zea mays subsp. mays]
gi|270314303|gb|ACZ74167.1| hypothetical protein [Zea mays subsp. mays]
gi|270314305|gb|ACZ74168.1| hypothetical protein [Zea mays subsp. mays]
gi|270314307|gb|ACZ74169.1| hypothetical protein [Zea mays subsp. mays]
gi|270314309|gb|ACZ74170.1| hypothetical protein [Zea mays subsp. mays]
gi|270314311|gb|ACZ74171.1| hypothetical protein [Zea mays subsp. mays]
gi|270314313|gb|ACZ74172.1| hypothetical protein [Zea mays subsp. mays]
gi|270314315|gb|ACZ74173.1| hypothetical protein [Zea mays subsp. mays]
gi|270314317|gb|ACZ74174.1| hypothetical protein [Zea mays subsp. mays]
gi|270314319|gb|ACZ74175.1| hypothetical protein [Zea mays subsp. mays]
gi|270314321|gb|ACZ74176.1| hypothetical protein [Zea mays subsp. mays]
gi|270314323|gb|ACZ74177.1| hypothetical protein [Zea mays subsp. mays]
gi|270314325|gb|ACZ74178.1| hypothetical protein [Zea mays subsp. mays]
gi|270314327|gb|ACZ74179.1| hypothetical protein [Zea mays subsp. mays]
gi|270314329|gb|ACZ74180.1| hypothetical protein [Zea mays subsp. mays]
gi|270314331|gb|ACZ74181.1| hypothetical protein [Zea mays subsp. mays]
gi|270314333|gb|ACZ74182.1| hypothetical protein [Zea mays subsp. mays]
gi|270314335|gb|ACZ74183.1| hypothetical protein [Zea mays subsp. mays]
gi|270314337|gb|ACZ74184.1| hypothetical protein [Zea mays subsp. mays]
gi|270314339|gb|ACZ74185.1| hypothetical protein [Zea mays subsp. mays]
gi|270314343|gb|ACZ74187.1| hypothetical protein [Zea mays subsp. mays]
gi|270314345|gb|ACZ74188.1| hypothetical protein [Zea mays subsp. mays]
gi|270314347|gb|ACZ74189.1| hypothetical protein [Zea mays subsp. mays]
gi|270314349|gb|ACZ74190.1| hypothetical protein [Zea mays subsp. mays]
gi|270314351|gb|ACZ74191.1| hypothetical protein [Zea mays subsp. mays]
gi|270314353|gb|ACZ74192.1| hypothetical protein [Zea mays subsp. mays]
gi|270314355|gb|ACZ74193.1| hypothetical protein [Zea mays subsp. mays]
gi|270314357|gb|ACZ74194.1| hypothetical protein [Zea mays subsp. mays]
gi|270314359|gb|ACZ74195.1| hypothetical protein [Zea mays subsp. mays]
gi|270314361|gb|ACZ74196.1| hypothetical protein [Zea mays subsp. mays]
gi|270314363|gb|ACZ74197.1| hypothetical protein [Zea mays subsp. mays]
gi|270314365|gb|ACZ74198.1| hypothetical protein [Zea mays subsp. mays]
gi|270314367|gb|ACZ74199.1| hypothetical protein [Zea mays subsp. mays]
gi|270314369|gb|ACZ74200.1| hypothetical protein [Zea mays subsp. mays]
gi|270314371|gb|ACZ74201.1| hypothetical protein [Zea mays subsp. mays]
gi|270314373|gb|ACZ74202.1| hypothetical protein [Zea mays subsp. mays]
gi|270314375|gb|ACZ74203.1| hypothetical protein [Zea mays subsp. mays]
gi|270314377|gb|ACZ74204.1| hypothetical protein [Zea mays subsp. mays]
gi|270314379|gb|ACZ74205.1| hypothetical protein [Zea mays subsp. mays]
gi|270314381|gb|ACZ74206.1| hypothetical protein [Zea mays subsp. mays]
gi|270314383|gb|ACZ74207.1| hypothetical protein [Zea mays subsp. mays]
Length = 39
Score = 43.2 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+++AGA+ +V GS+ F YA+ + +K S
Sbjct: 1 VIEAGANAIVAGSAVFGAPD---YAEAIKGIKTS 31
>gi|291560402|emb|CBL39202.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase, eukaryotic type [butyrate-producing bacterium
SSC/2]
Length = 264
Score = 43.2 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K++ KAL L++ GG+T N K +++GA ++V S F G++ Y RL+
Sbjct: 70 DKVQALKALKAFEGG-LQIGGGITDENAKEFIESGASHVIVTSFVF-AGGKVHY-DRLDA 126
Query: 216 LKKS 219
LK+
Sbjct: 127 LKEQ 130
>gi|91200773|emb|CAJ73826.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 432
Score = 43.2 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 39/217 (17%), Positives = 67/217 (30%), Gaps = 25/217 (11%)
Query: 13 AADFSRLGEEISNITKA---GAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDCH 68
A DF + I ++A GA + P I S G + IR LR
Sbjct: 11 ALDFVDIHRAIKVASEAIEGGADWLEI------GTPLIKSEGMNAIRRLREIFPDTMLVA 64
Query: 69 LM-ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE-TPVAIL 126
M +A I ++R GK G+ + + +
Sbjct: 65 DMKTMDAGRVEMEMAAKAGANIAVVM--GNAPGATIRECVLAGKNYGIKVCADFMDTDAI 122
Query: 127 EDVIDEI-----DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
++ I + D I I T + + + + + V GG+ S
Sbjct: 123 DERIGIVEKCGVDYISIHTAIDDQMSGK-TPFNV-----LRHICENAHTPVAVAGGINSE 176
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
N+ + AGA +++VG + A + K
Sbjct: 177 NVVDAINAGAQIVIVGGYISKSENARDAANNIRQAVK 213
>gi|310826474|ref|YP_003958831.1| hypothetical protein ELI_0854 [Eubacterium limosum KIST612]
gi|308738208|gb|ADO35868.1| hypothetical protein ELI_0854 [Eubacterium limosum KIST612]
Length = 201
Score = 43.2 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ G+ I + GG+++ NI+S+ +AGA V SS + Y K L
Sbjct: 144 LSEICGEMPIPVYAIGGISAENIRSVQEAGAAGACVMSSIMRSEAPEEYVKTL 196
>gi|55670885|pdb|1XI3|A Chain A, Thiamine Phosphate Pyrophosphorylase From Pyrococcus
Furiosus Pfu-1255191-001
gi|55670886|pdb|1XI3|B Chain B, Thiamine Phosphate Pyrophosphorylase From Pyrococcus
Furiosus Pfu-1255191-001
Length = 215
Score = 43.2 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 25/61 (40%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ ++ I + GG+ N + +++ G D + V S+ + + L + +
Sbjct: 154 LRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEEV 213
Query: 221 L 221
L
Sbjct: 214 L 214
>gi|269121807|ref|YP_003309984.1| 3-hexulose-6-phosphate synthase [Sebaldella termitidis ATCC 33386]
gi|268615685|gb|ACZ10053.1| 3-hexulose-6-phosphate synthase [Sebaldella termitidis ATCC 33386]
Length = 211
Score = 43.2 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIG-KRSISLEVDGGVTSRNIKSLVQAGADLLV 195
I+ V+ G Q + + K + + + V GG++S+ I V D+++
Sbjct: 129 HILAVHTGADQQAEGRTPLD---DLKVMTDCAKKAKIAVAGGISSKTIDKYVALKPDIII 185
Query: 196 VGSSFFNQKGEISYAKRLND-LKKS 219
VGS+ + A+ + + +KKS
Sbjct: 186 VGSAITRAADPVEEARLIKEAIKKS 210
>gi|239623129|ref|ZP_04666160.1| 3-hexulose-6-phosphate synthase [Clostridiales bacterium
1_7_47_FAA]
gi|239522496|gb|EEQ62362.1| 3-hexulose-6-phosphate synthase [Clostridiales bacterium 1_7_47FAA]
Length = 210
Score = 43.2 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ ++ K + + I++ GG+ ++ +V DL++VGS+ + + A+ +
Sbjct: 146 LENLKILKETVTQSQIAIA--GGIDLDTLREIVPLKPDLVIVGSAIIRAENPLLMARTMR 203
Query: 215 DLKKSA 220
++ K A
Sbjct: 204 NIMKEA 209
>gi|167768427|ref|ZP_02440480.1| hypothetical protein CLOSS21_02986 [Clostridium sp. SS2/1]
gi|317499211|ref|ZP_07957486.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167709951|gb|EDS20530.1| hypothetical protein CLOSS21_02986 [Clostridium sp. SS2/1]
gi|316893525|gb|EFV15732.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 264
Score = 43.2 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K++ KAL L++ GG+T N K +++GA ++V S F G++ Y RL+
Sbjct: 70 DKVQALKALKAFEGG-LQIGGGITDENAKEFIESGASHVIVTSFVF-AGGKVHY-DRLDA 126
Query: 216 LKKS 219
LK+
Sbjct: 127 LKEQ 130
>gi|87309318|ref|ZP_01091454.1| probable thiamine-phosphate pyrophosphorylase [Blastopirellula
marina DSM 3645]
gi|87287957|gb|EAQ79855.1| probable thiamine-phosphate pyrophosphorylase [Blastopirellula
marina DSM 3645]
Length = 357
Score = 43.2 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 129 VIDEIDMILIMTVNPGFGGQ--QLIEST-IPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
V+D D I V P F Q + + +RQ I + ++ GG+T NI
Sbjct: 268 VLDGADYI---GVGPTFPSQTKSFDQFPGLDLVRQVAGEIRLPAFAI---GGITLENIGQ 321
Query: 186 LVQAG-ADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+V+AG + + V G + A+ + + A
Sbjct: 322 VVEAGLSRVAVSG-AIAGANDPREAAEAMRQSLRGA 356
>gi|138894209|ref|YP_001124662.1| transcriptional regulator TenI [Geobacillus thermodenitrificans
NG80-2]
gi|196250691|ref|ZP_03149379.1| thiamine monophosphate synthase [Geobacillus sp. G11MC16]
gi|134265722|gb|ABO65917.1| Regulatory protein TenI [Geobacillus thermodenitrificans NG80-2]
gi|196209770|gb|EDY04541.1| thiamine monophosphate synthase [Geobacillus sp. G11MC16]
Length = 203
Score = 43.2 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 152 ESTIPK-IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+P+ + K + I + GG+ + N + +++AGA + V S+ F +S A
Sbjct: 131 PGVLPRGVDLLKEIAAAVHIPVIAIGGIHAGNARRVLEAGAAGVAVLSAIFFAADPVSEA 190
Query: 211 KRLNDLKK 218
KRL ++ K
Sbjct: 191 KRLAEIVK 198
>gi|253579999|ref|ZP_04857266.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848518|gb|EES76481.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 255
Score = 43.2 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L++ GGV N + AGA ++V S F G IS+ + LN +K+
Sbjct: 85 LQIGGGVNPENAGEYLSAGASHVIVTSYVFK-DGRISW-ENLNKMKE 129
>gi|254173651|ref|ZP_04880323.1| geranylgeranylglyceryl phosphate synthase [Thermococcus sp. AM4]
gi|214032343|gb|EEB73173.1| geranylgeranylglyceryl phosphate synthase [Thermococcus sp. AM4]
Length = 252
Score = 43.2 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
I + +I + L V GG+ + + V+AGA+++V G++
Sbjct: 183 QPVPPEMIALVRKVID---VPLIVGGGIRNAEQARRAVEAGANIIVTGTAIEKAGSIERA 239
Query: 210 AKRLNDL 216
+L +L
Sbjct: 240 RAKLEEL 246
>gi|317056812|ref|YP_004105279.1| thiamine monophosphate synthase [Ruminococcus albus 7]
gi|315449081|gb|ADU22645.1| thiamine monophosphate synthase [Ruminococcus albus 7]
Length = 201
Score = 43.2 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K + + + GG+T+ N ++AGAD + + SSF + + RL
Sbjct: 143 LKEICNTVKLPVYAIGGITADNAAECIKAGADGICLMSSFMQAENVSEFMDRLR 196
>gi|18977486|ref|NP_578843.1| orotidine 5'-phosphate decarboxylase [Pyrococcus furiosus DSM 3638]
gi|21759371|sp|Q8U1U1|PYRF_PYRFU RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
gi|18893187|gb|AAL81238.1| orotidine-5'-phosphate decarboxylase [Pyrococcus furiosus DSM 3638]
Length = 211
Score = 43.2 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 21/177 (11%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMISSIDS----HINIIADAGCDIITFHPESSPHIRRS 102
I G VI L+ + L ++ I + + DAG D I H ++
Sbjct: 36 IGSGLGVISELKKKTGLPIIADLKLADIPNTNRLIAKKVYDAGADYIILHSFVGRDSVKA 95
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
++ + + ++ LE + D + M G + +IR +
Sbjct: 96 VKELGEIIMIVEMS-----HPGALEFINPLTDKFIDMANEIKPFGVIAPGTRPERIRYIR 150
Query: 163 ALIGKRSISLEV----DG--GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ K ++V G G + ++AGAD +++G + +N + AK++
Sbjct: 151 ERLSK---DIKVLTPGIGAQGGSP---VEALKAGADYIIIGRAIYNAERPREAAKKI 201
>gi|18977706|ref|NP_579063.1| thiamine-phosphate pyrophosphorylase [Pyrococcus furiosus DSM 3638]
gi|24212487|sp|Q8U192|THIE_PYRFU RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|18893440|gb|AAL81458.1| thiamine phosphate pyrophosphorylase [Pyrococcus furiosus DSM 3638]
Length = 207
Score = 43.2 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 25/61 (40%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ ++ I + GG+ N + +++ G D + V S+ + + L + +
Sbjct: 146 LRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEEV 205
Query: 221 L 221
L
Sbjct: 206 L 206
>gi|289551626|ref|YP_003472530.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
lugdunensis HKU09-01]
gi|289181157|gb|ADC88402.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
lugdunensis HKU09-01]
Length = 210
Score = 42.8 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H K+ V + + +D++
Sbjct: 67 DYEVSQAIKFGADVVTILGVAEDASIKAAVEEAHKHDKQLLVDMIAVQDLEKRAQELDDM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R+ K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLDSLRKVKSVI--KNSKVAVAGGIKPDTIKEIVAENPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + + AK+ D
Sbjct: 184 VIVGGGIANAEDPVEVAKQCRD 205
>gi|254295319|ref|YP_003061342.1| thiamine-phosphate pyrophosphorylase [Hirschia baltica ATCC 49814]
gi|254043850|gb|ACT60645.1| thiamine-phosphate pyrophosphorylase [Hirschia baltica ATCC 49814]
Length = 217
Score = 42.8 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 172 LEV----DGGVTSRNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLNDLKKS 219
+EV GG+T N K L+ AGAD L V S +N G + + N L +S
Sbjct: 163 IEVPCVAIGGITVENAKPLIDAGADFLAVSSGVWNYADGPKAAVEAFNVLMQS 215
>gi|14590953|ref|NP_143028.1| geranylgeranylglyceryl phosphate synthase-like protein [Pyrococcus
horikoshii OT3]
gi|7674157|sp|O58851|GGGPS_PYRHO RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|3257540|dbj|BAA30223.1| 254aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 254
Score = 42.8 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+R K++I + L V GG+ + K L+++GAD++V G++ K KRL
Sbjct: 190 EMVRVVKSVID---VPLIVGGGIKSGEQAKKLIKSGADIIVTGTAIEKAKSLEEARKRLE 246
Query: 215 DLKK 218
++
Sbjct: 247 AIRN 250
>gi|254511929|ref|ZP_05123996.1| thiamine-phosphate pyrophosphorylase [Rhodobacteraceae bacterium
KLH11]
gi|221535640|gb|EEE38628.1| thiamine-phosphate pyrophosphorylase [Rhodobacteraceae bacterium
KLH11]
Length = 198
Score = 42.8 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 18/179 (10%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + G K + + D DV+R + S + H + ++ H I
Sbjct: 16 LRRMLPLGVKLVQLRIKDQ--------PDDVMRRQIAISRDLCRAHDAVLVVNDHWQIAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
D GCD I E L+ I G K GV+ + + + + + D + + V
Sbjct: 68 DLGCDWIHLGQEDLDDAD--LKVIQKAGLKLGVSTHDDDELERVLTMGP--DYVALGPVY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
P + + + +P++ + KA +G I L GG++ ++ AGAD++ S+
Sbjct: 124 PTILKKMKWHQQGLPRVTEWKARLG--DIPLVGIGGMSVERAAGVLDAGADIV---SAV 177
>gi|293603240|ref|ZP_06685672.1| thiamine-phosphate diphosphorylase [Achromobacter piechaudii ATCC
43553]
gi|292818372|gb|EFF77421.1| thiamine-phosphate diphosphorylase [Achromobacter piechaudii ATCC
43553]
Length = 221
Score = 42.8 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
TV P L S + + R+ ++ GG+T N + QAGAD + V ++
Sbjct: 138 TVKPDTVRAPL--SVLTEARRLVDERDAPRPAVVAIGGITPDNAPLVAQAGADAIAVITA 195
Query: 200 FFNQK 204
F
Sbjct: 196 LFEAP 200
>gi|289207577|ref|YP_003459643.1| thiamine-phosphate pyrophosphorylase [Thioalkalivibrio sp. K90mix]
gi|288943208|gb|ADC70907.1| thiamine-phosphate pyrophosphorylase [Thioalkalivibrio sp. K90mix]
Length = 214
Score = 42.8 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV---G-SSFFNQKGEISYAKRL 213
+R+A+A + + + GG+T N +V AGAD LV G S+ + A+R+
Sbjct: 157 VRRARAALD---LPICGIGGITPDNAAEVVAAGAD-LVAVIQGISA---APDPEAAARRI 209
Query: 214 NDL 216
+ L
Sbjct: 210 SAL 212
>gi|71907107|ref|YP_284694.1| putative molybdenum utilization protein ModD [Dechloromonas
aromatica RCB]
gi|71846728|gb|AAZ46224.1| Putative molybdenum utilization protein ModD [Dechloromonas
aromatica RCB]
Length = 281
Score = 42.8 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 43/118 (36%), Gaps = 14/118 (11%)
Query: 99 IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
++R + + + + L D++ + ++P +
Sbjct: 178 PAATVRRLRRQWPERAIVVELADEDEALLWARAGADILQLEKLSP------------EAV 225
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + +G + GG+ S N ++ +AGAD+LV S+ + A L+ L
Sbjct: 226 TRLRQTLGDCPARIAAAGGINSANAEAYARAGADILVT-SAPYFAP-PRDVAVTLSPL 281
>gi|240145014|ref|ZP_04743615.1| 1-(5-phosphoribosyl)-5-
((5'-phosphoribosylamino)methylideneamino)imidazole-4-
carboxamide isomerase [Roseburia intestinalis L1-82]
gi|257202961|gb|EEV01246.1| 1-(5-phosphoribosyl)-5-
((5'-phosphoribosylamino)methylideneamino)imidazole-4-
carboxamide isomerase [Roseburia intestinalis L1-82]
Length = 259
Score = 42.8 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
QA+ + L++ GGVT+ N K + AGA ++V S F G+I+Y L LK
Sbjct: 72 EQAEHALRAYPGGLQIGGGVTAENAKEFLDAGASHVIVTSYVFR-DGKINY-DNLKRLKA 129
Query: 219 S 219
+
Sbjct: 130 A 130
>gi|158335325|ref|YP_001516497.1| hypothetical protein AM1_2169 [Acaryochloris marina MBIC11017]
gi|158305566|gb|ABW27183.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 247
Score = 42.8 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 90/244 (36%), Gaps = 47/244 (19%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSD 62
+I+I+ + D + + + + GA + +I+ AD+IR++R
Sbjct: 13 RAIKIISGLNNFDIAHVTAVVKAAEQGGATFV-----------DIAADADLIRTVRQSIQ 61
Query: 63 SVFDCHLMISSIDSHINIIADAGCDII------TFHPESSPHIRRSLRTIHAMGKKTGVA 116
+ + +A AG D+I +F+ + + + + + A
Sbjct: 62 LPICV--SAVEPEKFVEAVA-AGADLIEIGNFDSFYAQGRQFSAKDVLELTHQTR----A 114
Query: 117 INPETPVAILEDVIDEIDMILIM------------------TVNPGFGGQ-QLIESTIPK 157
+ P P+++ I E+D + + + +P G L+E P
Sbjct: 115 LLPTIPLSVTVPHILELDQQVQLAQDLVKAGATLIQTEGGTSSDPSHSGTLGLMEKAAPT 174
Query: 158 IRQAKALIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ A + RS+ + V G+++ + AGA + VGS+ ++ +
Sbjct: 175 LAAAYEI--SRSVDIPVLCASGLSNVTAPLAIAAGASGIGVGSAVNRLNDPLAMVAAVRS 232
Query: 216 LKKS 219
L +S
Sbjct: 233 LVES 236
>gi|299138702|ref|ZP_07031880.1| thiamine-phosphate pyrophosphorylase [Acidobacterium sp. MP5ACTX8]
gi|298599338|gb|EFI55498.1| thiamine-phosphate pyrophosphorylase [Acidobacterium sp. MP5ACTX8]
Length = 206
Score = 42.8 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKR 212
+ +++A+AL K + GG+ N +++++AGAD + V+G F+ R
Sbjct: 145 LEGVQRARALTAKP---IVAIGGINRENARAVIEAGADSIAVIG-GLFSGGESAGKVAR 199
>gi|167837913|ref|ZP_02464796.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
thailandensis MSMB43]
Length = 229
Score = 42.8 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 20/150 (13%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR+ + +++ + AG ++I P + + R A
Sbjct: 69 IAALRAALPADAIVGAGTVLRAEYVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGI 122
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSIS 171
G A TP + D D +L M + P ++ +A+I R
Sbjct: 123 GCAPGVATPTEAFAALADGAD-VLKM----------FPAEQLGTPAVKAWRAVIDARVPL 171
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ V GG+T N+ + AGA+ +GS+ +
Sbjct: 172 VPV-GGITPENMGPYLAAGANGFGLGSALY 200
>gi|288561076|ref|YP_003424562.1| thiamine monophosphate synthase ThiE [Methanobrevibacter
ruminantium M1]
gi|288543786|gb|ADC47670.1| thiamine monophosphate synthase ThiE [Methanobrevibacter
ruminantium M1]
Length = 219
Score = 42.8 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H + R I GV+ T ++ D D I V P +
Sbjct: 96 VHIGQDDMPAKVAREIIGEEMILGVS--ASTVEEAMKAESDGADYIGSGAVFP--TATKD 151
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
++ K + K ++ SI + GG+T N +SL A D V S+ N +
Sbjct: 152 DADSVSK-EELKEIVNSTSIPVVAIGGITIENAESLKDAEIDGFSVVSAIMNADDPKKAS 210
Query: 211 KRLNDL 216
+ L ++
Sbjct: 211 EILKEI 216
>gi|302348757|ref|YP_003816395.1| Hexulose-6-phosphate synthase [Acidilobus saccharovorans 345-15]
gi|302329169|gb|ADL19364.1| Hexulose-6-phosphate synthase [Acidilobus saccharovorans 345-15]
Length = 228
Score = 42.8 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
+R+AK + G + V GG+ ++ +L AGAD++++GS+
Sbjct: 167 VRRAKDVFGGP---VAVAGGIKPSDVSALASAGADIIIIGSAITKSSDP 212
>gi|330507792|ref|YP_004384220.1| tryptophan synthase subunit alpha [Methanosaeta concilii GP-6]
gi|328928600|gb|AEB68402.1| tryptophan synthase, alpha subunit [Methanosaeta concilii GP-6]
Length = 258
Score = 42.8 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 40/226 (17%), Positives = 68/226 (30%), Gaps = 25/226 (11%)
Query: 21 EEISNITKAGAKQI-----HFD-VMDG-------CFVPNISFGADVIRSLRSYSDSVFDC 67
E + + +AGA I H D + DG DV + +D
Sbjct: 29 ELVRRLVRAGADIIELGLPHSDPIADGPTIQAAAQRAIAAGMNTDVYFQVAEEADVPVPK 88
Query: 68 HLMISSI-------DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
M + A G + G + P
Sbjct: 89 VFMGYYNMVYARGLERFARDCARCGITGMIVPDLPPEEAAPLKEACGKHGVDLIYLVAPN 148
Query: 121 TPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
TP A ++ + +E L + G G + R + + G T
Sbjct: 149 TPPARIDLIAEETGGFLYLVARTGVTGA--RSEVLQDTRDLILRVPGKKPKAVGFGISTP 206
Query: 181 RNIKSLVQAGADLLVVGSSFFN--QKGEISYAKRL-NDLKKSALAI 223
+++AGAD +VGS+ + +G I + L ++KK+ A
Sbjct: 207 DQAAEVIRAGADAAIVGSACVDLIARGRIDELEALVGEMKKAVKAA 252
>gi|240103232|ref|YP_002959541.1| geranylgeranylglyceryl phosphate synthase-like protein
[Thermococcus gammatolerans EJ3]
gi|259647504|sp|C5A615|GGGPS_THEGJ RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|239910786|gb|ACS33677.1| Geranylgeranylglyceryl phosphate synthase (GGGPS) [Thermococcus
gammatolerans EJ3]
Length = 252
Score = 42.8 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
I + +I + L V GG+ T + V+AGAD++V G++
Sbjct: 183 QPVPPEMIALVRKVID---VPLIVGGGIRTKEQARRAVEAGADIIVTGTAVEKAGSIEKA 239
Query: 210 AKRLNDL 216
K+L +L
Sbjct: 240 RKKLEEL 246
>gi|212639179|ref|YP_002315699.1| thiamine-phosphate pyrophosphorylase [Anoxybacillus flavithermus
WK1]
gi|226695857|sp|B7GKQ8|THIE_ANOFW RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|212560659|gb|ACJ33714.1| Thiamine monophosphate synthase [Anoxybacillus flavithermus WK1]
Length = 217
Score = 42.8 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I +A ++ + L GG+T + K +++AGAD + V S+ + KRL
Sbjct: 148 LTMIEHIRAH--EKRVPLVAIGGITEQTAKQVIEAGADGIAVISAICRAEHIYEQTKRLY 205
Query: 215 DLKKSA 220
++ A
Sbjct: 206 EMVMRA 211
>gi|308178938|ref|YP_003918344.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Arthrobacter
arilaitensis Re117]
gi|307746401|emb|CBT77373.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Arthrobacter
arilaitensis Re117]
Length = 214
Score = 42.8 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFN-----------QKGEISYAKRLNDLKKSA 220
GG+ N+ ++AGA +GSS + +S + +++++KSA
Sbjct: 159 GGINEENMAQWLEAGATGFGIGSSLYKSGRSLEDLKTRAGNLVSAYQTIHEMRKSA 214
>gi|298713160|emb|CBJ26916.1| 1-(5-phosphoribosyl)-5-((5-
phosphoribosylamino)methylideneamino)imidazole-4-
carboxamide isomerase [Ectocarpus siliculosus]
Length = 292
Score = 42.8 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GGV N + AGA ++V S F GEI + +RL +L+ +
Sbjct: 107 GGVNPSNAMKYLDAGASHVIVTSYVFK-DGEIDW-ERLEELRTA 148
>gi|270314341|gb|ACZ74186.1| hypothetical protein [Zea mays subsp. mays]
Length = 39
Score = 42.8 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++AGA+ +V GS+ F K +
Sbjct: 1 VIEAGANAIVAGSAVFGAPDYAEAIKGIK 29
>gi|269120461|ref|YP_003308638.1| 3-hexulose-6-phosphate synthase [Sebaldella termitidis ATCC 33386]
gi|268614339|gb|ACZ08707.1| 3-hexulose-6-phosphate synthase [Sebaldella termitidis ATCC 33386]
Length = 212
Score = 42.8 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 158 IRQAKALIGK-RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I K + + + V GG++SR + V D+L+VGS+ + + AK + D+
Sbjct: 147 IEDLKIMTAHTKKAKISVAGGISSRTAQMYVDLNPDILIVGSAITHADDPAAEAKAIRDI 206
>gi|189423519|ref|YP_001950696.1| modD protein [Geobacter lovleyi SZ]
gi|189419778|gb|ACD94176.1| modD protein [Geobacter lovleyi SZ]
Length = 334
Score = 42.8 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ + + + ++ + GG+ +N +G D+LV+ S +F + +I
Sbjct: 280 VHEVRQI--NPAVKVSAAGGINEQNAAEYAASGVDILVLSSVYFGKPADIGAV 330
>gi|56416018|ref|YP_153093.1| hypothetical protein SPA4035 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364945|ref|YP_002144582.1| hypothetical protein SSPA3744 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56130275|gb|AAV79781.1| hypothetical protein SPA4035 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096422|emb|CAR62028.1| hypothetical protein SSPA3744 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 279
Score = 42.8 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 18/142 (12%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG-------------KKTGVAINPET 121
+ I IA AG D + H ++ + H G G+
Sbjct: 122 EKEILEIARAGADGLHTHKSDWDDLQDIVNLAHQYGLTVDAYIGHPDDLHTFGIPARTPE 181
Query: 122 PVAILEDVIDE--IDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
VA + + + +DMI +MT G I I + +AL+G + +GG+
Sbjct: 182 EVASVAKRMQDIGVDMIGLMTGMSYEGVAAGDIPQMIK--DRLRALVGAVDVPTLAEGGI 239
Query: 179 TSRNIKSLVQAGADLLVVGSSF 200
N K+ G ++LVVG++
Sbjct: 240 NLANAKAFKDTGVNILVVGTAI 261
>gi|16766067|ref|NP_461682.1| hexulose 6 phosphate synthase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|168245144|ref|ZP_02670076.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194448615|ref|YP_002046713.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197263298|ref|ZP_03163372.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|215261434|pdb|3F4W|A Chain A, The 1.65a Crystal Structure Of 3-Hexulose-6-Phosphate
Synthase From Salmonella Typhimurium
gi|215261435|pdb|3F4W|B Chain B, The 1.65a Crystal Structure Of 3-Hexulose-6-Phosphate
Synthase From Salmonella Typhimurium
gi|16421302|gb|AAL21641.1| putative hexulose 6 phosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|194406919|gb|ACF67138.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197241553|gb|EDY24173.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205336095|gb|EDZ22859.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|261247898|emb|CBG25729.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267994857|gb|ACY89742.1| putative hexulose 6 phosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159323|emb|CBW18839.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312913776|dbj|BAJ37750.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223547|gb|EFX48612.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|323131109|gb|ADX18539.1| putative hexulose 6 phosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|332989632|gb|AEF08615.1| putative hexulose 6 phosphate synthase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 211
Score = 42.8 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 79 NIIADAGCDIITF-HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI--DM 135
++ DAG D +T I+ +R GK+ V + + +++E DM
Sbjct: 71 QLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADM 130
Query: 136 ILIMT-VNPGFGGQQLIES--TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ + T + G++ I+ T+ K+R R + V GG++S+ +K G D
Sbjct: 131 LAVHTGTDQQAAGRKPIDDLITMLKVR--------RKARIAVAGGISSQTVKDYALLGPD 182
Query: 193 LLVVGSSFFNQKGEISYAKRL 213
+++VGS+ + A+++
Sbjct: 183 VVIVGSAITHAADPAGEARKI 203
>gi|39995712|ref|NP_951663.1| thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase
[Geobacter sulfurreducens PCA]
gi|47606070|sp|P61422|THIED_GEOSL RecName: Full=Bifunctional protein thiED; Includes: RecName:
Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase; Includes: RecName:
Full=Hydroxymethylpyrimidine/phosphomethylpyrimidine
kinase; AltName: Full=Hydroxymethylpyrimidine kinase;
Short=HMP kinase; AltName: Full=Hydroxymethylpyrimidine
phosphate kinase; Short=HMP-P kinase;
Short=HMP-phosphate kinase; Short=HMPP kinase
gi|39982476|gb|AAR33936.1| thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase
[Geobacter sulfurreducens PCA]
gi|298504723|gb|ADI83446.1| 4-amino-5-hydroxymethyl-2-methylpyrimidine-phosphate kinase and
thiamin monophosphate synthase [Geobacter sulfurreducens
KN400]
Length = 490
Score = 42.8 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
A+ SI + GG+T N S++ AGAD + V S+ + A + L
Sbjct: 161 LAAIRSSISIPIVAIGGITRDNGASVIDAGADAVAVISAVLSHPDPALAATEIALL 216
>gi|148244140|ref|YP_001220616.1| orotidine 5'-phosphate decarboxylase [Staphylococcus aureus subsp.
aureus JH9]
gi|150375708|ref|YP_001312305.1| orotidine 5'-phosphate decarboxylase [Staphylococcus aureus subsp.
aureus JH1]
gi|147742269|gb|ABQ50512.1| hexulose-6-phosphate synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|149947696|gb|ABR53631.1| Orotidine 5'-phosphate decarboxylase [Staphylococcus aureus subsp.
aureus JH1]
gi|270299855|gb|ACZ68661.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
aureus]
gi|281334326|gb|ADA61410.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
epidermidis]
Length = 210
Score = 42.8 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAVKFGADVVTILGVAEDASIKAAVEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R+ K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLDSLRKVKSVI--KNSKVAVAGGIKPDTIKEIVAEEPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+ D
Sbjct: 184 VIVGGGIANADDPVEAAKQCRD 205
>gi|52549015|gb|AAU82864.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [uncultured
archaeon GZfos21B5]
Length = 395
Score = 42.8 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + K + GK + + V GG+ + GAD+++VG N K ++R L
Sbjct: 325 IAEIKRIGGK--MLVAVAGGIKEDTAPEAINGGADIIIVGRGITNSKDVEGVSRRFLRLL 382
Query: 218 KSAL 221
K +
Sbjct: 383 KEEI 386
>gi|115757030|ref|XP_791249.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115961441|ref|XP_001178510.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 740
Score = 42.5 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 75/226 (33%), Gaps = 43/226 (19%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFG----ADVIRSLRSYSDSVFD 66
I+ D +LG + + +DV+D FV +F +V+ + +
Sbjct: 157 IMTMDSPKLGNHVRTARRRM-----YDVLDDRFVRASNFDIPHIPEVVEAKKKEPLL--- 208
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
I D T ++ I + K +A T +
Sbjct: 209 -----------IKYFVSQVSDSPTI---------EDVKWIKTLTKLPIIAKGVLTGESAR 248
Query: 127 EDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN-IKS 185
+D IL+ G + + I + + + + + +DGGV +
Sbjct: 249 MLAEGGVDGILVSAH--GGRQLDYLPAPIDALSEVVEAVRGYPVEVYMDGGVRRGTDVFK 306
Query: 186 LVQAGADLLVVGS-SF----FNQKGEISYAKRLNDLKKS---ALAI 223
+ GA + +G + F KGE A+ L L++ A+A+
Sbjct: 307 ALAMGARAVFIGRPALWGLAFKGKGEEGAAQVLEILRQELSLAMAL 352
>gi|23100152|ref|NP_693618.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Oceanobacillus
iheyensis HTE831]
gi|22778384|dbj|BAC14653.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Oceanobacillus
iheyensis HTE831]
Length = 181
Score = 42.5 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%)
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
LI + + V GG+ + + + Q D++++GS+ Q AK + ++ +
Sbjct: 125 LIEGVPVKVAVAGGINLKTLPEITQHKPDIVIIGSAITGQDNPELVAKTIKNMMQ 179
>gi|311103821|ref|YP_003976674.1| thiamine-phosphate pyrophosphorylase [Achromobacter xylosoxidans
A8]
gi|310758510|gb|ADP13959.1| thiamine-phosphate pyrophosphorylase [Achromobacter xylosoxidans
A8]
Length = 221
Score = 42.5 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
+V P L S + + R+ ++ GG+T N + QAGAD + V ++
Sbjct: 138 SVKPDTVRAPL--SVLTEARRLTDNCDAPRPAVVAIGGITPDNAPLVAQAGADAIAVITA 195
Query: 200 FFNQK 204
F
Sbjct: 196 LFEAP 200
>gi|237654341|ref|YP_002890655.1| thiamine-phosphate pyrophosphorylase [Thauera sp. MZ1T]
gi|237625588|gb|ACR02278.1| thiamine-phosphate pyrophosphorylase [Thauera sp. MZ1T]
Length = 210
Score = 42.5 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKRLNDL 216
+ +A+ + + + GG+T ++ AGADLL VVG F + A+ L
Sbjct: 154 VERARR---ELGLPVAAIGGITLERAPQVIAAGADLLAVVG-DVFGAADPAARARMYRAL 209
>gi|134045635|ref|YP_001097121.1| tryptophan synthase subunit alpha [Methanococcus maripaludis C5]
gi|166200553|sp|A4FXH7|TRPA_METM5 RecName: Full=Tryptophan synthase alpha chain
gi|132663260|gb|ABO34906.1| tryptophan synthase, alpha chain [Methanococcus maripaludis C5]
Length = 259
Score = 42.5 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 21/187 (11%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMIS-SI------DSHINIIADAGCDIITFHPESSPHI 99
I+ +V++ R SD+ LM + ++ + +AG +
Sbjct: 64 IAKSFEVLKEFRKESDTP--VILMTYYNPVFKRGIENFVISAKEAGAKGLIIVDLPLQEA 121
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPK 157
T P TP L+ + L + G G + T
Sbjct: 122 TEYREICKKHEMGTVFLAAPNTPEERLKISDEASTEFLYLISTFGITGARDTFEQMTFDF 181
Query: 158 IRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFF----NQKGEISYAK 211
I++A+ + V G G++ + +SL++ GAD ++VGS+F N
Sbjct: 182 IKRARTTCK---GKICV-GFGISKGSHAESLIEQGADGVIVGSAFVDIIKNYGDSEEALV 237
Query: 212 RLNDLKK 218
+L + K
Sbjct: 238 KLEEFAK 244
>gi|329849665|ref|ZP_08264511.1| thiamine-phosphate pyrophosphorylase [Asticcacaulis biprosthecum
C19]
gi|328841576|gb|EGF91146.1| thiamine-phosphate pyrophosphorylase [Asticcacaulis biprosthecum
C19]
Length = 206
Score = 42.5 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 31/204 (15%), Positives = 59/204 (28%), Gaps = 29/204 (14%)
Query: 14 ADFSRLGEEISNITKAG-AKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
AD ++ AG + + D D IR++ + H +
Sbjct: 14 ADAQAFARDLEAALSAGEVAALQIRLKDT--------PPDYIRAVTRVLTPIAHAHGVAV 65
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
++ H ++ + G D H S + R I GV + + +
Sbjct: 66 LMNDHADLAKELGLDG--VHIGQSDIAFKEARRILGPKAMIGVTCHNS------RHLAMD 117
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKA------LIGKRSISLEVDGGVTSRNIKSL 186
V G + + GG+T+ N + +
Sbjct: 118 AADAGADYVAFG----AFYPTQTKTVEHMAELETLTIWQESMEAPCVAIGGITADNAREV 173
Query: 187 VQAGAD-LLVVGSSFFNQKGEISY 209
+AGAD + V G + +N +
Sbjct: 174 AEAGADFIAVSG-AVWNHPDGPAA 196
>gi|237800435|ref|ZP_04588896.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331023294|gb|EGI03351.1| thiamine-phosphate pyrophosphorylase [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 205
Score = 42.5 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAKR 212
+ I Q + + + + V GG+T N LV+ GADLL V G F + +R
Sbjct: 143 LDLIAQVRTKV---HLPIAVIGGITLENAPQLVEHGADLLAVVHG--LFGAETSREVTRR 197
Query: 213 LNDL 216
Sbjct: 198 AKAF 201
>gi|254421972|ref|ZP_05035690.1| nicotinate-nucleotide pyrophosphorylase [Synechococcus sp. PCC
7335]
gi|196189461|gb|EDX84425.1| nicotinate-nucleotide pyrophosphorylase [Synechococcus sp. PCC
7335]
Length = 293
Score = 42.5 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R+++ I A + +++ I I+++ P +
Sbjct: 179 HIAVAGGIGRAIKHIRARIPYPITIEVETESLEQVKEAIAHQADIIMLDNMP-------L 231
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
E+ + +A + I +E G +T I+++ + G D +
Sbjct: 232 ETMYEAVEAIRA--ANKRIKIEASGNITLDTIRAVAETGVDYI 272
>gi|221632428|ref|YP_002521649.1| thiamine-phosphate pyrophosphorylase [Thermomicrobium roseum DSM
5159]
gi|221155668|gb|ACM04795.1| thiamine-phosphate pyrophosphorylase [Thermomicrobium roseum DSM
5159]
Length = 222
Score = 42.5 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRLNDL 216
+ + G I + GG+T+ N ++++AGA + V+ S+ + A++L ++
Sbjct: 154 LEHLAQIAGAVGIPVVGIGGITAVNAAAVIRAGAVGVAVI-SAVVGAEDVREAARQLREV 212
Query: 217 KKSALA 222
+ALA
Sbjct: 213 VDAALA 218
>gi|291525982|emb|CBK91569.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase, eukaryotic type [Eubacterium rectale DSM
17629]
gi|291527283|emb|CBK92869.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase, eukaryotic type [Eubacterium rectale M104/1]
Length = 261
Score = 42.5 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L+V GG+T+ N + AGA ++V S F G I+YA LN LK
Sbjct: 85 LQVGGGITADNAMEFIDAGAAAVIVTSYVFK-DGRINYA-NLNRLK 128
>gi|154687954|ref|YP_001423115.1| thiamine-phosphate pyrophosphorylase [Bacillus amyloliquefaciens
FZB42]
gi|166228068|sp|A7ZA58|THIE_BACA2 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|154353805|gb|ABS75884.1| ThiE [Bacillus amyloliquefaciens FZB42]
Length = 224
Score = 42.5 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL-NDL 216
I + + +I + GG+T+ N +++AGAD + + S+ + + A++ ++
Sbjct: 158 IEEVRRQGI--TIPIVGIGGITADNAAPVIEAGADGVSMISAISQAEDPKAAARKFSEEI 215
Query: 217 KKSALAI 223
++S +
Sbjct: 216 RRSKAGL 222
>gi|330683990|gb|EGG95750.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis VCU121]
Length = 210
Score = 42.5 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 5/167 (2%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHA 108
V +S S + L I + ++ G DI T + I+ ++ H
Sbjct: 42 PAVELLSKSISKAQVLADLKIMDAADYEVSQAVKFGADITTILGVAEDASIKAAIEEAHK 101
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K+ V + + +DE+ I V+ G+ Q +S + +R+ K++I +
Sbjct: 102 HNKELLVDLIAVQDIEKRAKELDEMGADYI-AVHTGYDLQAQGQSPLENLRKIKSVI--K 158
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + V GG+ I+S+V DL++VG N + AK D
Sbjct: 159 NSKVAVAGGIKPDTIESIVAENPDLIIVGGGIANADDPKAAAKSCRD 205
>gi|319898576|ref|YP_004158669.1| thiamine-phosphate pyrophosphorylase [Bartonella clarridgeiae 73]
gi|319402540|emb|CBI76083.1| thiamine-phosphate pyrophosphorylase [Bartonella clarridgeiae 73]
Length = 201
Score = 42.5 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 20/203 (9%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G K I + D + I+ ++ D L+I+
Sbjct: 12 SADW------VERLIPFGVKLIQLRIKD----KDTETIIQHIKRAKNICDKFK-AQLIIN 60
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ I D CD I E + + I G K G++ + E + I + E
Sbjct: 61 D---YWKIAIDEKCDFIHLGQEDLKNTD--ISAIRKSGIKFGLSTHDEHELDISLSISPE 115
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ L + + KI+Q + I S+ L GG+T +++ GA+
Sbjct: 116 Y-IALGPIYPTILKKMKWAPQGLEKIKQWRKRID--SLPLVGIGGLTPERAIDVLKVGAN 172
Query: 193 -LLVVGSSFFNQKGEISYAKRLN 214
VV N+K E + +
Sbjct: 173 SAAVVTDIILNKKPEKRVQQWIK 195
>gi|167746894|ref|ZP_02419021.1| hypothetical protein ANACAC_01606 [Anaerostipes caccae DSM 14662]
gi|317471703|ref|ZP_07931044.1| 3-hexulose-6-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
gi|167653854|gb|EDR97983.1| hypothetical protein ANACAC_01606 [Anaerostipes caccae DSM 14662]
gi|316900807|gb|EFV22780.1| 3-hexulose-6-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
Length = 208
Score = 42.5 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ V GG+ S+ I V+ D+++VGS+ + ++ AK + D
Sbjct: 162 IAVAGGINSKTIGKYVELKPDIVIVGSAIGHADDPVAEAKAIQD 205
>gi|124363357|gb|ABN07165.1| hexulose-6-phosphate synthase [Methanocorpusculum labreanum Z]
Length = 420
Score = 42.5 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 158 IRQAKALIGKRSISLEVD--GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LN 214
I++ K + + V GG+ +K + AGAD++VVG + K + A+ L
Sbjct: 345 IKKIKEVAKTYDAKILVATAGGIRQPVVKKAIAAGADIVVVGRAITASKDIKNAAESFLE 404
Query: 215 DL 216
+L
Sbjct: 405 EL 406
>gi|162319793|ref|YP_001030432.2| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanocorpusculum labreanum Z]
Length = 403
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 158 IRQAKALIGKRSISLEVD--GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LN 214
I++ K + + V GG+ +K + AGAD++VVG + K + A+ L
Sbjct: 328 IKKIKEVAKTYDAKILVATAGGIRQPVVKKAIAAGADIVVVGRAITASKDIKNAAESFLE 387
Query: 215 DL 216
+L
Sbjct: 388 EL 389
>gi|228475861|ref|ZP_04060573.1| 3-hexulose-6-phosphate synthase [Staphylococcus hominis SK119]
gi|239636812|ref|ZP_04677814.1| 3-hexulose-6-phosphate synthase [Staphylococcus warneri L37603]
gi|228270093|gb|EEK11558.1| 3-hexulose-6-phosphate synthase [Staphylococcus hominis SK119]
gi|239598167|gb|EEQ80662.1| 3-hexulose-6-phosphate synthase [Staphylococcus warneri L37603]
gi|330685840|gb|EGG97469.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis VCU121]
Length = 210
Score = 42.5 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAVKFGADVVTILGVAEDASIKAAVEEAHKNDKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R+ K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLDSLRKVKSVI--KNSKVAVAGGIKPDTIKEIVAEEPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+ D
Sbjct: 184 VIVGGGIANADDPVEAAKQCRD 205
>gi|145348753|ref|XP_001418808.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579038|gb|ABO97101.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 285
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+R AK + L+V GGV N L+ AGA ++V S F L+++
Sbjct: 90 LRAAKEAVRAFPGGLQVGGGVNPTNASELLDAGASHVIVTSYVFR--DGALNEDALSEMI 147
Query: 218 KSALA 222
++ A
Sbjct: 148 RAVGA 152
>gi|73662928|ref|YP_301709.1| hexulose-6-phosphate synthase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119370762|sp|Q49WT7|HPS1_STAS1 RecName: Full=3-hexulose-6-phosphate synthase 1; Short=HPS 1;
AltName: Full=D-arabino-3-hexulose-6-phosphate
formaldehyde lyase 1
gi|72495443|dbj|BAE18764.1| putative hexulose-6-phosphate synthase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 210
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G DI+T + I+ ++ H GK+ V + + +D++
Sbjct: 67 DYEVSQAVKFGADIVTILGVAEDASIKAAVDEAHKHGKQLLVDMIAVQDLEKRAKDLDDL 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R+ K++I + + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRKVKSVIS--NSKVAVAGGIKPDTIKDIVAENPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 IIVGGGIANADDPVEAAKQCRA 205
>gi|238924893|ref|YP_002938409.1| APG10 (albino and pale green 10); 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imid
azole-4-carboxamide isomerase [Eubacterium rectale ATCC
33656]
gi|238876568|gb|ACR76275.1| APG10 (albino and pale green 10); 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imid
azole-4-carboxamide isomerase [Eubacterium rectale ATCC
33656]
Length = 261
Score = 42.5 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L+V GG+T+ N + AGA ++V S F G I+YA LN LK
Sbjct: 85 LQVGGGITADNAMEFIDAGAAAVIVTSYVFK-DGRINYA-NLNRLK 128
>gi|312129173|ref|YP_003996513.1| thiamine-phosphate diphosphorylase [Leadbetterella byssophila DSM
17132]
gi|311905719|gb|ADQ16160.1| thiamine-phosphate diphosphorylase [Leadbetterella byssophila DSM
17132]
Length = 201
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I K + + L GGV +N + +++AGAD L V S+ K A +L
Sbjct: 140 IEGIKKIKSLSKLPLVAIGGVNIKNARKILEAGADSLAVVSAICQAKDPKGAAYQLKSF 198
>gi|167042374|gb|ABZ07102.1| putative Quinolinate phosphoribosyl transferase, C-terminal domain
protein [uncultured marine crenarchaeote
HF4000_ANIW97M7]
Length = 280
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 150 LIESTIPK-IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ I K I + + I LE GG++S+NI + + G D++ VGS
Sbjct: 211 FSPTQIKKTIAALQKKKLRNKIKLEASGGISSKNIAAYAKTGVDIISVGS 260
>gi|39998054|ref|NP_954005.1| modD protein [Geobacter sulfurreducens PCA]
gi|39984999|gb|AAR36355.1| modD protein [Geobacter sulfurreducens PCA]
gi|298506996|gb|ADI85719.1| ModD protein [Geobacter sulfurreducens KN400]
Length = 283
Score = 42.5 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ Q + L + GG+ N G D+LV+ S++F + +I
Sbjct: 228 VPQLRKLAPMT--RISAAGGINESNAAVYAATGVDILVLSSAYFGRPADI 275
>gi|298675417|ref|YP_003727167.1| geranylgeranylglyceryl phosphate synthase [Methanohalobium
evestigatum Z-7303]
gi|298288405|gb|ADI74371.1| geranylgeranylglyceryl phosphate synthase [Methanohalobium
evestigatum Z-7303]
Length = 248
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
++ I+ K ++G + + GG+ + V+AGAD++V G+ + A
Sbjct: 181 PASPEMIKAVKKVLGDNKL-IVG-GGIRDPETARVCVKAGADMIVTGTVV---EETSDVA 235
Query: 211 KRLNDL 216
++ ++
Sbjct: 236 AKIEEI 241
>gi|162147566|ref|YP_001602027.1| thiamine-phosphate pyrophosphorylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542200|ref|YP_002274429.1| thiamine-phosphate pyrophosphorylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786143|emb|CAP55725.1| Thiamine-phosphate pyrophosphorylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209529877|gb|ACI49814.1| thiamine-phosphate pyrophosphorylase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 202
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 7/139 (5%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ + D G D I E + I A G + GV+ + + V D
Sbjct: 62 DYWRLALDEGIDFIHLGQEDLDTAD--VAAIRAGGIRLGVSTHSTDELDRALSVAP--DY 117
Query: 136 ILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + V P + + ++ + K L+G + L GG+T S + AGAD +
Sbjct: 118 VALGPVWPTKLKKMPWAPQGVERLAEWKRLVG--PVPLVAIGGITLARAASCIAAGADCV 175
Query: 195 VVGSSFFNQKGEISYAKRL 213
S F Q + +
Sbjct: 176 SAVSDFTGQPDPEAQVRAW 194
>gi|153869154|ref|ZP_01998831.1| Thiamine monophosphate synthase [Beggiatoa sp. PS]
gi|152074293|gb|EDN71162.1| Thiamine monophosphate synthase [Beggiatoa sp. PS]
Length = 210
Score = 42.5 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 22/59 (37%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I + L GG+T N L++AG + L V F Q A+R L
Sbjct: 150 IALLHQTRQQLDCPLVAIGGITPDNGSELIKAGVNCLAVIQGLFGQPDVKVAAQRYAQL 208
>gi|294495609|ref|YP_003542102.1| thiamine-phosphate diphosphorylase [Methanohalophilus mahii DSM
5219]
gi|292666608|gb|ADE36457.1| thiamine-phosphate diphosphorylase [Methanohalophilus mahii DSM
5219]
Length = 220
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LN 214
+I+ + I +I + GG+ N S+++ G D LV S+ + +
Sbjct: 151 ERIQAVRKTI---NIPIVAIGGINKDNCISVIEKGVDSLVAISAIVCSDDVRRETEYFIE 207
Query: 215 DLKK 218
++K
Sbjct: 208 TIRK 211
>gi|254995441|ref|ZP_05277631.1| nicotinate-nucleotide pyrophosphorylase [Anaplasma marginale str.
Mississippi]
Length = 270
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I + I + + + + + E + +++I++ G I
Sbjct: 161 HIVACGSITECVSRIRRKLGDVFITVECDNKLQVEESIKSSVNLIML-----DNMGVSDI 215
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ +I I S +EV GGV NI+ + G D + +GS
Sbjct: 216 KDSIKMI--------GNSAMVEVSGGVNLENIREIASLGVDYISIGS 254
>gi|294932231|ref|XP_002780169.1| 4-methyl-5-beta-hydroxyethylthiazole kinase, putative [Perkinsus
marinus ATCC 50983]
gi|239890091|gb|EER11964.1| 4-methyl-5-beta-hydroxyethylthiazole kinase, putative [Perkinsus
marinus ATCC 50983]
Length = 495
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 68/194 (35%), Gaps = 24/194 (12%)
Query: 17 SRLGEEISNITKAGAKQIHF---DVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
L +++ GA + DV G +V + + L+I
Sbjct: 19 LELPRMVASAVAGGATCVQLRLKDVSTGDYVKL---------AKETKKLMPRHVPLII-- 67
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI--NPETPVAILEDVID 131
D +++ +G D H + + R+I K GV+ E +A + D D
Sbjct: 68 -DDRVDVCMASGADG--VHVGDTDMSVKDARSIIGPDKILGVSTYGRQEDAIAAIRDGAD 124
Query: 132 EI--DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
I + PG Q L + I K KA +++ + GG++ VQ
Sbjct: 125 YIATGAVYPTVTKPGAVAQGLGQIDILK-AALKA--TGKTLPIVAIGGISPVTAIDCVQR 181
Query: 190 GADLLVVGSSFFNQ 203
GAD + S F+
Sbjct: 182 GADGVCAVSQIFDS 195
>gi|226324353|ref|ZP_03799871.1| hypothetical protein COPCOM_02134 [Coprococcus comes ATCC 27758]
gi|225206801|gb|EEG89155.1| hypothetical protein COPCOM_02134 [Coprococcus comes ATCC 27758]
Length = 257
Score = 42.5 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + KAL +++ GG+T+ N ++ GA ++V S F Q G++ Y RL+ L
Sbjct: 71 KAQALKALHAYPGG-MQIGGGITAENAAEYLEEGASHVIVTSYVF-QNGQVRY-DRLDRL 127
Query: 217 KKS 219
KK+
Sbjct: 128 KKA 130
>gi|182679126|ref|YP_001833272.1| thiamine-phosphate pyrophosphorylase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182635009|gb|ACB95783.1| thiamine-phosphate pyrophosphorylase [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 201
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 15/171 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
++ + G K + V D P +R+ + + ++ D H ++ +
Sbjct: 15 LARLLPCGVKLVQLRVKDLTGEP--------LRAEIAKARTLCDTHGAQLIVNDYWVEAI 66
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
D GCD H L I G + G++ + E + D I + +
Sbjct: 67 DLGCDY--VHLGQGDLDTADLPAIRRAGLRLGLSTHDEKELERALACAP--DYIALGPIY 122
Query: 143 PGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
P + ++ + K IG SI L GG+ + +++AGAD
Sbjct: 123 PTILKAMPFAPQGLARLGEWKRKIG--SIPLVGIGGINLDRVAGVLEAGAD 171
>gi|167580537|ref|ZP_02373411.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
thailandensis TXDOH]
Length = 229
Score = 42.5 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 16/148 (10%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR+ + +++ + AG ++I P + + R A
Sbjct: 69 IAALRAALPADAIVGAGTVLRAEYVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGI 122
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
G A TP + + D +L M G Q ++ +A+I R +
Sbjct: 123 GCAPGVATPTEAFAALANGAD-VLKMFPAEQLGTQA--------VKAWRAVIDARVPLVP 173
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFF 201
V GG+T N+ + AGA+ +GS+ +
Sbjct: 174 V-GGITPENMGPYLAAGANGFGLGSALY 200
>gi|260753628|ref|YP_003226521.1| modD protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258552991|gb|ACV75937.1| modD protein [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 289
Score = 42.1 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + + + SL GG+ NI ++AGAD++V
Sbjct: 225 KFTPQQLHHLHERLEFFD-HIPSLAAAGGINPENIADYIEAGADIIV 270
>gi|56552733|ref|YP_163572.1| modD protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|6478238|gb|AAF13762.1|AF117351_19 molybdenum transport system protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56544307|gb|AAV90461.1| modD protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 289
Score = 42.1 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + + + SL GG+ NI ++AGAD++V
Sbjct: 225 KFTPQQLHHLHERLKFFD-HIPSLAAAGGINPENIADYIEAGADIIV 270
>gi|296272263|ref|YP_003654894.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Arcobacter nitrofigilis DSM 7299]
gi|296096438|gb|ADG92388.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Arcobacter nitrofigilis DSM 7299]
Length = 235
Score = 42.1 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADL 193
+ I+ +N F G+ + + +IR+ + ++ +E+ GG+ IK ++ G D
Sbjct: 46 WVHIVDLNGAFEGK---PANLEQIRKIRENC---NLKIELGGGIRDEETIKMYIELGVDR 99
Query: 194 LVVGS 198
L++GS
Sbjct: 100 LILGS 104
>gi|256828732|ref|YP_003157460.1| thiamine-phosphate pyrophosphorylase [Desulfomicrobium baculatum
DSM 4028]
gi|256577908|gb|ACU89044.1| thiamine-phosphate pyrophosphorylase [Desulfomicrobium baculatum
DSM 4028]
Length = 211
Score = 42.1 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLKKSA 220
S+ L GG+ N +++AG D + VV S+ + A L + + A
Sbjct: 156 SLPLVGIGGIGPGNATEVIRAGCDGVAVV-SAIISAPDPKRAAAELKTIIRRA 207
>gi|56417272|ref|YP_154346.1| nicotinate-nucleotide pyrophosphorylase [Anaplasma marginale str.
St. Maries]
gi|56388504|gb|AAV87091.1| nicotinate-nucleotide pyrophosphorylase [Anaplasma marginale str.
St. Maries]
Length = 272
Score = 42.1 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H I + I + + + + + E + +++I++ G I
Sbjct: 163 HIVGCGSITECVSRIRRKLGDVFITVECDNKLQVEESIKSSVNLIML-----DNMGVSDI 217
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ +I I + S +EV GGV NI+ + GAD + +GS
Sbjct: 218 KDSIKMI--------ENSAMVEVSGGVNIENIREIASLGADYISIGS 256
>gi|284162891|ref|YP_003401514.1| Orotidine 5'-phosphate decarboxylase [Archaeoglobus profundus DSM
5631]
gi|284012888|gb|ADB58841.1| Orotidine 5'-phosphate decarboxylase [Archaeoglobus profundus DSM
5631]
Length = 425
Score = 42.1 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 7/149 (4%)
Query: 78 INIIADAGCDIITFHPESSPH-IRRSLRTIHAM-GKKTGVAINPETPVAILEDVIDEIDM 135
+ + A +G DI+ S+ I ++R+ K IN PV ++ ++E+
Sbjct: 71 VEMCAKSGADIVIILALSNDSTIEEAIRSARKYGCKIMADLINHPNPVERAKE-LEELG- 128
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + V+ G Q L I K ++ + S+ + V GG+ V GA++++
Sbjct: 129 VDYINVHVGIDVQML---GYDPIEILKKVVKEVSVPVAVAGGLDVDRASLCVSLGAEIVI 185
Query: 196 VGSSFFNQKGEISYAKRLNDLKKSALAID 224
VGS+ K A + SA ++
Sbjct: 186 VGSNIVKTKNPKESAIKFRKAIDSAKPVE 214
>gi|53802928|ref|YP_115387.1| thiamine-phosphate pyrophosphorylase [Methylococcus capsulatus str.
Bath]
gi|81823576|sp|Q602R3|THIE_METCA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|53756689|gb|AAU90980.1| thiamine-phosphate pyrophosphorylase [Methylococcus capsulatus str.
Bath]
Length = 224
Score = 42.1 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ + + I + GG+ + N ++ AGADL+ + F A+ L L
Sbjct: 151 RLETLREAGTRLQIPIAAIGGIDTTNAGQVIGAGADLVAAVEAVFGAADVARAARELCSL 210
>gi|312131325|ref|YP_003998665.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Leadbetterella byssophila DSM 17132]
gi|311907871|gb|ADQ18312.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Leadbetterella byssophila DSM 17132]
Length = 283
Score = 42.1 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPV---AILEDVIDEIDMILIMTVNPGFGGQ 148
H + + I+ +L+ K+ G+ ++ E V L+ V++ ++ IM N +G
Sbjct: 169 HVDYAGGIKEALQAAQNYVKEKGLKLDIEIEVRNLDELKQVLEVGGVVRIMLDNFNYG-- 226
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+IR+A +I R +E GG+T N++ + G D + +G
Sbjct: 227 --------QIREALQIIDGR-FPVEASGGITPENVREYAETGVDYVSMG 266
>gi|253732991|ref|ZP_04867156.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus TCH130]
gi|253729044|gb|EES97773.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus TCH130]
Length = 210
Score = 42.1 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKEIVAENPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 VIVGGGIANADDPVEAAKQCRA 205
>gi|297814045|ref|XP_002874906.1| hypothetical protein ARALYDRAFT_911953 [Arabidopsis lyrata subsp.
lyrata]
gi|297320743|gb|EFH51165.1| hypothetical protein ARALYDRAFT_911953 [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 42.1 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
D+++ +I +AG + + + P TP + +++ +
Sbjct: 121 DNYMTVIKNAGVHGLLVPDVPLEETEALRNEARKHQIELVLLTTPTTPKERMNAIVEASE 180
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAGAD 192
+ + + G G ES K++ I + + G G++ ++K + + GAD
Sbjct: 181 GFIYLVSSVGVTGT--RESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGAD 238
Query: 193 LLVVGSS 199
++VGS+
Sbjct: 239 GVIVGSA 245
>gi|241762518|ref|ZP_04760594.1| modD protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241372922|gb|EER62599.1| modD protein [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 289
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + + + SL GG+ NI ++AGAD++V
Sbjct: 225 KFTPQQLHHLHERLKFFD-HIPSLAAAGGINPENIADYIEAGADIIV 270
>gi|300112982|ref|YP_003759557.1| dihydroorotate dehydrogenase family protein [Nitrosococcus watsonii
C-113]
gi|299538919|gb|ADJ27236.1| dihydroorotate dehydrogenase family protein [Nitrosococcus watsonii
C-113]
Length = 331
Score = 42.1 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 28/160 (17%)
Query: 43 FVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS 102
F + A V+ R + L S + I A E+
Sbjct: 154 FGNDPDMSARVVEVCRKVTRKPLITKL--SPNQTSIEENARRC-------IEAGTDAFAV 204
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
+ T+ + I TP L+ + G G + + K+RQ
Sbjct: 205 INTL----MGMAIDIEQRTP--------------LLGNIQGGLSGPAIKPIALLKVRQVY 246
Query: 163 ALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFF 201
+ + I + GGV + ++ + AGA + VG++ F
Sbjct: 247 QVCREHGIPIIGQGGVASGKDALEFLIAGATTVGVGTALF 286
>gi|75676651|ref|YP_319072.1| thiamine monophosphate synthase [Nitrobacter winogradskyi Nb-255]
gi|74421521|gb|ABA05720.1| thiamine-phosphate diphosphorylase [Nitrobacter winogradskyi
Nb-255]
Length = 214
Score = 42.1 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H + I G G++ + + + + E D I + + P
Sbjct: 86 HLHLGQEDLATADVHEIRKAGLTLGLSTHDDAELET--ALAAEPDYIALGPIFPTTLKAM 143
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ IPKI + K +G +I L GG+ + AGAD + V S +
Sbjct: 144 RFAPQGIPKITEWKQRVG--NIPLVAIGGIKLEQAPEIYAAGADSIAVVSDITQNPDPDA 201
Query: 209 YAKRLND 215
K D
Sbjct: 202 RVKAWLD 208
>gi|77166274|ref|YP_344799.1| dihydroorotate dehydrogenase 1 [Nitrosococcus oceani ATCC 19707]
gi|254435794|ref|ZP_05049301.1| dihydroorotate dehydrogenase family protein [Nitrosococcus oceani
AFC27]
gi|76884588|gb|ABA59269.1| dihydroorotate oxidase B, catalytic subunit [Nitrosococcus oceani
ATCC 19707]
gi|207088905|gb|EDZ66177.1| dihydroorotate dehydrogenase family protein [Nitrosococcus oceani
AFC27]
Length = 331
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 37/187 (19%)
Query: 43 FVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS 102
F + A V+ + R + L S + I A E+
Sbjct: 154 FGNDPHMSARVVEACRKVTRKPLITKL--SPNQTSIEENARRC-------IEAGTDGFAV 204
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
+ T+ + I TP L+ + G G + + K+RQ
Sbjct: 205 INTL----MGMAIDIEQRTP--------------LLGNIQGGLSGPAIKPIALLKVRQVY 246
Query: 163 ALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQK--------GEISYAKRL 213
I + GGV + ++ + AGA + VG++ F ++Y KR
Sbjct: 247 QACRAHGIPIIGQGGVASGKDALEFLIAGATTVGVGTALFYDPLLCAKINAEIVAYLKR- 305
Query: 214 NDLKKSA 220
+DL+ A
Sbjct: 306 HDLRAVA 312
>gi|20094836|ref|NP_614683.1| nicotinate phosphoribosyltransferase [Methanopyrus kandleri AV19]
gi|19888054|gb|AAM02613.1| Nicotinic acid phosphoribosyltransferase [Methanopyrus kandleri
AV19]
Length = 394
Score = 42.1 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 158 IRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+R+ + L G + + V GG+ I+ L + GAD VG++
Sbjct: 248 VREVRWELDLRGYEHVKIMVSGGLDEGEIRRLAEVGADAFGVGTAI 293
>gi|261407682|ref|YP_003243923.1| 3-hexulose-6-phosphate synthase [Paenibacillus sp. Y412MC10]
gi|261284145|gb|ACX66116.1| 3-hexulose-6-phosphate synthase [Paenibacillus sp. Y412MC10]
Length = 210
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +++ ++ K ++ + V GG+ + ++QA DL++VG
Sbjct: 131 ICVHSGYDHQAEGKNSFEELAAIKRVVKQ--AKTAVAGGIKMETLPEVIQANPDLVIVGG 188
Query: 199 SFFNQKGEISYAKRLNDLKKSA 220
+Q + + A ++N+L K A
Sbjct: 189 GITSQTDKKATAAQMNELVKQA 210
>gi|315230271|ref|YP_004070707.1| thiamin-phosphate pyrophosphorylase [Thermococcus barophilus MP]
gi|315183299|gb|ADT83484.1| thiamin-phosphate pyrophosphorylase [Thermococcus barophilus MP]
Length = 209
Score = 42.1 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 25/56 (44%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K ++ I + GG+ N++ +++ G D + V S+ + A+ + +
Sbjct: 146 LKKVVESVKIPVVAIGGINHENVRKVLEIGVDGIAVISAIVGAEDVKKAAEEMRRI 201
>gi|167618646|ref|ZP_02387277.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
thailandensis Bt4]
gi|257137892|ref|ZP_05586154.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
thailandensis E264]
gi|284159396|ref|YP_441724.3| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
thailandensis E264]
gi|83655088|gb|ABC39151.1| 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate
[Burkholderia thailandensis E264]
Length = 229
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
+++ + AG ++I P + + R A G A TP + + D +
Sbjct: 92 YVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 144
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
L M G Q ++ +A+I R + V GG+T N+ + AGA+ +
Sbjct: 145 LKMFPAEQLGTQA--------VKAWRAVIDARVPLVPV-GGITPENMGPYLAAGANGFGL 195
Query: 197 GSSFF 201
GS+ +
Sbjct: 196 GSALY 200
>gi|78188390|ref|YP_378728.1| putative molybdenum utilization protein ModD [Chlorobium
chlorochromatii CaD3]
gi|78170589|gb|ABB27685.1| Putative molybdenum utilization protein ModD [Chlorobium
chlorochromatii CaD3]
Length = 282
Score = 42.1 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 13/122 (10%)
Query: 92 HPESSPHIRRSLRTIHAMGKKT---GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ 148
H E + R L T+ ++ + + I ET L D++ + + P
Sbjct: 167 HTEFCGGLERLLATLSSLKMELPEHKIMIEAETADEALRIAAAGADVVQLDKLPPAE--- 223
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
++ I K+R +I++ GG+ ++N G D+LV+ S +F + +I
Sbjct: 224 --LQPLITKLRVI-----APTITISAAGGINAQNAADYAATGVDILVLSSPYFGKPADIK 276
Query: 209 YA 210
Sbjct: 277 VI 278
>gi|298373794|ref|ZP_06983783.1| inosine-5'-monophosphate dehydrogenase [Bacteroidetes oral taxon
274 str. F0058]
gi|298274846|gb|EFI16398.1| inosine-5'-monophosphate dehydrogenase [Bacteroidetes oral taxon
274 str. F0058]
Length = 482
Score = 42.1 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
+ + +AG D+IT H S ++ ++R I + E+
Sbjct: 223 EDTLRRVEALINAGVDVITVDSAHG-HSRNVIDAVRKIRDKFPDIDLVAGNIVTARAAEE 281
Query: 129 VIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+ + + + PG G + I I++ I L DGG+
Sbjct: 282 LAKAGVNTVKVGIGPGSICTTRVVAGVGV--PQITAIQEVAEYCKTNDIKLIADGGIKFS 339
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGAD++++GS
Sbjct: 340 GDIAKAIAAGADVVMLGS 357
>gi|46198623|ref|YP_004290.1| thiamin-phosphate pyrophosphorylase [Thermus thermophilus HB27]
gi|55980643|ref|YP_143940.1| thiamin-phosphate pyrophosphorylase [Thermus thermophilus HB8]
gi|81821883|sp|Q5SKG9|THIE_THET8 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|81830642|sp|Q72KL8|THIE_THET2 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|46196246|gb|AAS80663.1| thiamin-phosphate pyrophosphorylase [Thermus thermophilus HB27]
gi|55772056|dbj|BAD70497.1| thiamin-phosphate pyrophosphorylase [Thermus thermophilus HB8]
Length = 206
Score = 42.1 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+R A +G++ GG+ N+ +++AGA +VV + + A+ L +
Sbjct: 145 VRWAAENLGEKPW--YAIGGIDLGNLDQVLEAGARRIVVVRAILDAPDPERAARALRE 200
>gi|51894425|ref|YP_077116.1| copper homeostasis protein [Symbiobacterium thermophilum IAM 14863]
gi|51858114|dbj|BAD42272.1| copper homeostasis protein [Symbiobacterium thermophilum IAM 14863]
Length = 229
Score = 42.1 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLV-QAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L+ + + +++ GGVT N LV + GA L VGS+ + G +S A R+ +L++
Sbjct: 163 LRELVQRSPLEIQIGGGVTPANAARLVRETGASALHVGSAVRDSAGGVSAA-RVAELRR 220
>gi|317508961|ref|ZP_07966594.1| hypothetical protein HMPREF9336_02966 [Segniliparus rugosus ATCC
BAA-974]
gi|316252726|gb|EFV12163.1| hypothetical protein HMPREF9336_02966 [Segniliparus rugosus ATCC
BAA-974]
Length = 52
Score = 42.1 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 6 QIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGC 42
I PS+L+ F+ L +++ + GA + DVM G
Sbjct: 1 MIAPSVLSVGFASLAGDVAAVR--GADWLRVDVMGGV 35
>gi|308071959|dbj|BAJ21968.1| 3-hexulose-6-phosphate synthase [Methylothermus subterraneus]
Length = 214
Score = 41.7 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GGV ++ +V+AGA+++VVG + + + AK+ +L +
Sbjct: 170 GGVKHETVQDVVRAGANIVVVGGAIYGAPDPAAAAKKFRELVDA 213
>gi|86141227|ref|ZP_01059773.1| thiamine-phosphate pyrophosphorylase [Leeuwenhoekiella blandensis
MED217]
gi|85831786|gb|EAQ50241.1| thiamine-phosphate pyrophosphorylase [Leeuwenhoekiella blandensis
MED217]
Length = 220
Score = 41.7 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND-- 215
+R+ +++ K +++ G + + N + +V+AGAD + V S+ + A+ L
Sbjct: 151 VRKVRSITQKPLVAI---GNMNASNARQVVEAGADCIAVVSAICAAPKPKNAAQLLRKEI 207
Query: 216 ---LKKSA 220
LK A
Sbjct: 208 QKGLKNRA 215
>gi|209522663|ref|ZP_03271221.1| nicotinate-nucleotide pyrophosphorylase [Arthrospira maxima CS-328]
gi|209496712|gb|EDZ97009.1| nicotinate-nucleotide pyrophosphorylase [Arthrospira maxima CS-328]
Length = 304
Score = 41.7 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I +++ I + I ET +E V VN G L
Sbjct: 177 HILAAGGIEKAIALIRETMPYP-LTIEVET--ETIEQV--------KTAVNAGADIIMLD 225
Query: 152 ESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLL 194
++ +++A +I + + I +E G +T + I+ + + G D +
Sbjct: 226 NMSVAMMQEAIEMIRQYNSRIKIEASGNITLQTIRQVAEIGVDYI 270
>gi|310791626|gb|EFQ27153.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Glomerella graminicola M1.001]
Length = 258
Score = 41.7 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
G G +I A+ + L+V GG+ N + ++AGA+ +++ S F
Sbjct: 51 GLAGAHVIMLGPGNTEAARESLKAWPGGLQVGGGINDENAREWIEAGAEKVIITSYLF 108
>gi|289578027|ref|YP_003476654.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter italicus
Ab9]
gi|297544298|ref|YP_003676600.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|289527740|gb|ADD02092.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter italicus
Ab9]
gi|296842073|gb|ADH60589.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 344
Score = 41.7 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKR---SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + + + ++ ++ + V GG+ + L ++GAD VGS
Sbjct: 260 VYELRQRLNQKGFTNVKIIVSGGLNPEKVAELSESGADAFGVGSYI 305
>gi|307266787|ref|ZP_07548311.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|326391767|ref|ZP_08213287.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter
ethanolicus JW 200]
gi|306918180|gb|EFN48430.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|325992183|gb|EGD50655.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter
ethanolicus JW 200]
Length = 344
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKR---SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + + + ++ ++ + V GG+ + L ++GAD VGS
Sbjct: 260 VYELRQRLNQKGFTNVKIIVSGGLNPERVAELSESGADAFGVGSYI 305
>gi|302337951|ref|YP_003803157.1| dihydroorotate dehydrogenase [Spirochaeta smaragdinae DSM 11293]
gi|301635136|gb|ADK80563.1| dihydroorotate dehydrogenase family protein [Spirochaeta
smaragdinae DSM 11293]
Length = 597
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 138 IMTVNPGFGGQQ--LI-ESTIPKIRQAKALIGKRSISLEVDGGVTSRN-IKSLVQAGADL 193
+M ++ G GG+ I + K+R + +G + + + GGV + ++ +AGAD+
Sbjct: 233 LMNIHGGKGGKSGRWIHREAVEKVRSIREQVGADPLIIGM-GGVEDATGVIAMREAGADV 291
Query: 194 LVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ +GS+ F + +L S A
Sbjct: 292 VGIGSA-FAMVRPEDWEGWFEELAPSDGA 319
>gi|297531182|ref|YP_003672457.1| thiamine monophosphate synthase [Geobacillus sp. C56-T3]
gi|297254434|gb|ADI27880.1| thiamine monophosphate synthase [Geobacillus sp. C56-T3]
Length = 201
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ SI + GG+ + N + +++AGA + V S+ F ++ AKRL D+ K
Sbjct: 141 LAEIVAAVSIPVIAIGGIHAGNARRVLEAGAAGVAVLSAVFFAADPVAEAKRLADIVK 198
>gi|261418855|ref|YP_003252537.1| TenI family transcriptional regulator [Geobacillus sp. Y412MC61]
gi|319765672|ref|YP_004131173.1| thiamine monophosphate synthase [Geobacillus sp. Y412MC52]
gi|261375312|gb|ACX78055.1| thiamine monophosphate synthase [Geobacillus sp. Y412MC61]
gi|317110538|gb|ADU93030.1| thiamine monophosphate synthase [Geobacillus sp. Y412MC52]
Length = 201
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ SI + GG+ + N + +++AGA + V S+ F ++ AKRL D+ K
Sbjct: 141 LAEIVAAVSIPVIAIGGIHAGNARRVLEAGAAGVAVLSAVFFAADPVAEAKRLADIVK 198
>gi|158321713|ref|YP_001514220.1| thiamine-phosphate pyrophosphorylase [Alkaliphilus oremlandii
OhILAs]
gi|189030306|sp|A8MK92|THIE_ALKOO RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|158141912|gb|ABW20224.1| thiamine-phosphate pyrophosphorylase [Alkaliphilus oremlandii
OhILAs]
Length = 209
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 5/125 (4%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H S +R++ K GV+ T + D D I + + P
Sbjct: 87 VHVGQSDLPAHIVRSMIGQNKILGVST--ATLEESKKAAEDGADYIGVGALFPTGTKTDA 144
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
T+ Q + + I + GG+ NIK++++ G D + + S+ ++ A
Sbjct: 145 NPVTLD---QLRYIKENMDIPVVGIGGICEDNIKTIMEVGIDGVAIVSAILGKENIKEAA 201
Query: 211 KRLND 215
+ L
Sbjct: 202 ESLKA 206
>gi|325955009|ref|YP_004238669.1| thiamine-phosphate pyrophosphorylase [Weeksella virosa DSM 16922]
gi|323437627|gb|ADX68091.1| Thiamine-phosphate pyrophosphorylase [Weeksella virosa DSM 16922]
Length = 219
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 46/144 (31%), Gaps = 36/144 (25%)
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMG-------KKTGVAINPETPVAILEDVIDEID 134
AD I + ++ HI SL I + GV+ TP
Sbjct: 92 ADISPSKIKKNTQALKHIGWSLENIKQLDDDEMKYVHHLGVSPIFSTPTKTNT------- 144
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-- 192
GF G + K K I++ GG+ NI ++QAGAD
Sbjct: 145 -----ITEWGFDGLKF----------LKTKTSKPLIAI---GGINESNIAKIIQAGADSV 186
Query: 193 LLVVGSSFFNQKGEISYAKRLNDL 216
+V S+ K + L +
Sbjct: 187 AIV--SAICGSKNPKKSTQILKQI 208
>gi|14521314|ref|NP_126789.1| geranylgeranylglyceryl phosphate synthase-like protein [Pyrococcus
abyssi GE5]
gi|13632818|sp|Q9UZN7|GGGPS_PYRAB RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|5458532|emb|CAB50020.1| pcrB protein homolog [Pyrococcus abyssi GE5]
Length = 252
Score = 41.7 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+R K++I + L V GG+ T ++ L +AGAD++V G++ + K ++L
Sbjct: 189 EMVRIVKSVID---VPLIVGGGIRTGDQVRELTKAGADIIVTGTAIESTKSIDEAKRKLE 245
Query: 215 DLKK 218
++++
Sbjct: 246 EIRR 249
>gi|291568191|dbj|BAI90463.1| nicotinate-nucleotide pyrophosphorylase [Arthrospira platensis
NIES-39]
Length = 304
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I +++ I + I ET +E V VN G L
Sbjct: 177 HILAAGGIEKAIALIRETMPYP-LTIEVET--ETIEQV--------KTAVNAGADIIMLD 225
Query: 152 ESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLL 194
++ +++A +I + + I +E G +T + I+ + + G D +
Sbjct: 226 NMSLAMMQEAIEIIRQYNSRIKIEASGNITLQTIRQVAEIGVDYI 270
>gi|284051226|ref|ZP_06381436.1| nicotinate-nucleotide pyrophosphorylase [Arthrospira platensis str.
Paraca]
Length = 304
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I +++ I + I ET +E V VN G L
Sbjct: 177 HILAAGGIEKAIALIRETMPYP-LTIEVET--ETIEQV--------KTAVNAGADIIMLD 225
Query: 152 ESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLL 194
++ +++A +I + + I +E G +T + I+ + + G D +
Sbjct: 226 NMSLAMMQEAIEIIRQYNSRIKIEASGNITLQTIRQVAEIGVDYI 270
>gi|326201848|ref|ZP_08191718.1| thiamine-phosphate pyrophosphorylase [Clostridium papyrosolvens DSM
2782]
gi|325987643|gb|EGD48469.1| thiamine-phosphate pyrophosphorylase [Clostridium papyrosolvens DSM
2782]
Length = 210
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 7/127 (5%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGV-AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ 149
H S +R I K GV A E + + D I + + + + +
Sbjct: 85 VHVGQSDLPATIVRKIIGKDKILGVSAGCAEKAIEAQREGADYIGVGALFSTSTKTDAKS 144
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ + T+ KI + + SI + GG+ +N+ L G D + V S+ QK
Sbjct: 145 VSKETLIKI------VKEVSIPVVGIGGINEQNVAQLKNTGIDGIAVVSAIIAQKDIKLS 198
Query: 210 AKRLNDL 216
A+++ ++
Sbjct: 199 AEKMLEI 205
>gi|228475093|ref|ZP_04059820.1| 3-hexulose-6-phosphate synthase [Staphylococcus hominis SK119]
gi|228270857|gb|EEK12254.1| 3-hexulose-6-phosphate synthase [Staphylococcus hominis SK119]
Length = 210
Score = 41.7 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H GK+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVVTILGVAEDASIKGAVEEAHKHGKQLLVDMIAVQDLEKSAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPETIKEIVAEEPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+ +
Sbjct: 184 VIVGGGIANADDPVEAAKQCRE 205
>gi|20089846|ref|NP_615921.1| orotidine 5'-phosphate decarboxylase [Methanosarcina acetivorans
C2A]
gi|19914794|gb|AAM04401.1| orotidine-5-phosphate decarboxylase [Methanosarcina acetivorans
C2A]
Length = 243
Score = 41.7 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA D + E + D + + ++ G +IR L ++ + D +
Sbjct: 30 ILALDVTDREEALKIAEDV---WEFVDAIKVGYPLILATGLGIIRELAEFAPVIADFKVA 86
Query: 71 -ISSIDSHI-NIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETP--VAI 125
I + + I + + +AG D + + + + K V P
Sbjct: 87 DIPNTNRLICDQVFEAGADAVIAQGFTGRDSLDACIEIASEYRKDVFVVSEMSHPGGADF 146
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPK-IRQAKALIGKRSISLEVDGGVTSR--N 182
++ V + I M + G G + +T PK +++ + +IG + + GV ++
Sbjct: 147 MQPVAEAIAK---MALEAGAFG-LVAPATRPKRVKKIRRIIGDKLTIISP--GVGAQGGK 200
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
++ AGAD ++VG S + + A+++ + ++ L
Sbjct: 201 ASDVIAAGADWVIVGRSIYKAESPKEAARQIAEEIQAEL 239
>gi|150401545|ref|YP_001325311.1| tryptophan synthase subunit alpha [Methanococcus aeolicus Nankai-3]
gi|150014248|gb|ABR56699.1| tryptophan synthase, alpha subunit [Methanococcus aeolicus
Nankai-3]
Length = 250
Score = 41.7 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 67/180 (37%), Gaps = 14/180 (7%)
Query: 51 ADVIRSLRSYSDSVFDC-----HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT 105
D+I+ R + + + +++ I + +AG D + L
Sbjct: 67 FDIIKEFRKTNSTPIVVMTYYNPVYFRGVENFIKSLKEAGGDGLIVVDLPVEDATDYLNI 126
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPKIRQAKA 163
KT P T L+ + D + + + G G + + E + ++ K
Sbjct: 127 CKKYNIKTVFLGAPNTTEERLKKIDDASSLFVYLVSVYGTTGTREGVSEEALNFLKNTKK 186
Query: 164 LIGKRSISLEVDG-GVTS-RNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLNDLKKSA 220
+ + V G G++ +++S V GAD ++VGS++ + + + L+ A
Sbjct: 187 VCKNP---IYV-GFGISKKEHVESFVNNGADGVIVGSAYVKIIEEFGDSEETIKRLEAKA 242
>gi|282163531|ref|YP_003355916.1| 3-hexulose-6-phosphate synthase [Methanocella paludicola SANAE]
gi|282155845|dbj|BAI60933.1| 3-hexulose-6-phosphate synthase [Methanocella paludicola SANAE]
Length = 428
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I+ V+ G Q + + + ++ + + +I + V GG+ + + V GAD+++VG
Sbjct: 133 IIGVHVGIDQQMVGKDPLDILKGVRKAV---TIQIAVAGGLDADSAAGAVALGADIVIVG 189
Query: 198 SSFFNQKGEISYAKRLNDLKKSA 220
+ + + AKR+ + SA
Sbjct: 190 GNIIRARDVTASAKRVRESIDSA 212
>gi|15235430|ref|NP_192170.1| tryptophan synthase, alpha subunit, putative [Arabidopsis thaliana]
gi|3892048|gb|AAC78257.1| putative tryptophan synthase alpha 1-like protein [Arabidopsis
thaliana]
gi|7269021|emb|CAB80754.1| tryptophan synthase alpha 1-like protein [Arabidopsis thaliana]
gi|26450413|dbj|BAC42321.1| putative tryptophan synthase alpha 1 [Arabidopsis thaliana]
gi|29824243|gb|AAP04082.1| putative tryptophan synthase alpha 1 chain [Arabidopsis thaliana]
gi|332656804|gb|AEE82204.1| tryptophan synthase alpha chain [Arabidopsis thaliana]
Length = 275
Score = 41.7 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
+ + P TP + +++ + + + + G G ES K++ I
Sbjct: 152 RKHQIELVLLTTPTTPKERMNAIVEASEGFIYLVSSVGVTGT--RESVNEKVQSLLQQIK 209
Query: 167 KRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDL 216
+ + G G++ ++K + + GAD ++VGS+ GE ++ L +L
Sbjct: 210 EATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAMVKILGESESPEQGLKEL 262
>gi|118581007|ref|YP_902257.1| phosphomethylpyrimidine kinase [Pelobacter propionicus DSM 2379]
gi|118503717|gb|ABL00200.1| phosphomethylpyrimidine kinase [Pelobacter propionicus DSM 2379]
Length = 494
Score = 41.7 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + + + GG+T N +V AGAD L V SS + L L
Sbjct: 163 EIRDRIRLPIVAIGGITPANACRVVDAGADALAVISSVLSSPRPDVAVTELKLL 216
>gi|268325054|emb|CBH38642.1| bifunctional enzyme fae/hps [uncultured archaeon]
Length = 395
Score = 41.7 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + K + GK + + V GG+ + GAD+++VG N K ++R L
Sbjct: 325 IAEIKRIGGK--MLVAVAGGIKEDTAPEAITGGADIIIVGRGITNSKDVEGVSRRFLRLL 382
Query: 218 KSAL 221
K +
Sbjct: 383 KEEI 386
>gi|56419157|ref|YP_146475.1| transcriptional regulator TenI [Geobacillus kaustophilus HTA426]
gi|56378999|dbj|BAD74907.1| thiamine-phosphate pyrophosphorylase [Geobacillus kaustophilus
HTA426]
Length = 201
Score = 41.7 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ + + A + I++ GG+ + N + +++AGA + V S+ F ++ AK
Sbjct: 135 PRGLDSLAEIAAAVSIPVIAI---GGIHAGNARRVLEAGAAGVAVLSAVFFAADPVAEAK 191
Query: 212 RLNDLKK 218
RL D+ K
Sbjct: 192 RLADIVK 198
>gi|21228185|ref|NP_634107.1| orotidine 5'-phosphate decarboxylase [Methanosarcina mazei Go1]
gi|23822009|sp|Q8PV88|PYRF_METMA RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
gi|20906635|gb|AAM31779.1| Orotidine 5'-phosphate decarboxylase [Methanosarcina mazei Go1]
Length = 220
Score = 41.7 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 8/180 (4%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLM-ISSIDSHI-NIIADAGCDIITFHPESSPH-IRRSL 103
++ G D+IR L ++ + D + I + + I + AG D + + + +
Sbjct: 41 LATGLDIIRELARFAPVIADFKVADIPNTNRLICEQVFKAGADAVIVQGFTGRDSLDACI 100
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
GK V P E + + I M V G G + ++++ +
Sbjct: 101 EVASKYGKDVFVVSEMSHPGGA-EFLQSAAEAIAKMAVEAGAFGLVAPATRPERVKEIRK 159
Query: 164 LIGKRSISLEVDGGVTSR--NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+IG R + GV ++ ++ AGAD ++VG S + + A + + ++ L
Sbjct: 160 IIGDRLTIISP--GVGAQGGKASDVISAGADWVIVGRSIYKAESPKEAACEIAEEIQAEL 217
>gi|323140513|ref|ZP_08075440.1| thiamine-phosphate diphosphorylase [Phascolarctobacterium sp. YIT
12067]
gi|322414965|gb|EFY05757.1| thiamine-phosphate diphosphorylase [Phascolarctobacterium sp. YIT
12067]
Length = 211
Score = 41.7 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGAD--LLVVGSSFFNQKGEISYAKRLND 215
A+ ++ + + GGVT+ N + + AGAD +V G Q + K +
Sbjct: 150 LAAICREKGLPVVGIGGVTADNYREVRAAGADGAAIVSG--ILAQSDIRATVKAIAK 204
>gi|261366228|ref|ZP_05979111.1| thiamine-phosphate diphosphorylase [Subdoligranulum variabile DSM
15176]
gi|282571820|gb|EFB77355.1| thiamine-phosphate diphosphorylase [Subdoligranulum variabile DSM
15176]
Length = 214
Score = 41.7 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG----SSFFNQKGEISYAKRLNDL 216
+A+ I + GG+T N+ L G V G S+ F + + ++ L L
Sbjct: 151 LRAICDAVPIPVVAIGGITRENLPRLAGTG----VAGVAVVSAIFAAEDITAASRELRAL 206
>gi|260654134|ref|ZP_05859624.1| putative nicotinate-nucleotide pyrophosphorylase [Jonquetella
anthropi E3_33 E1]
gi|260631119|gb|EEX49313.1| putative nicotinate-nucleotide pyrophosphorylase [Jonquetella
anthropi E3_33 E1]
Length = 348
Score = 41.7 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGK---RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+R+ + + K ++ + GG+ I+ L AG D+ VGS
Sbjct: 264 VREVRWRLDKAGFPNVKIVASGGLDPDRIRILSAAGVDMFGVGSYI 309
>gi|295094192|emb|CBK83283.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase, eukaryotic type [Coprococcus sp. ART55/1]
Length = 258
Score = 41.7 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+RQA+ + L++ GG+ + N + + GA ++ S F GEI+Y L L+
Sbjct: 71 VRQAQLALAAYPGGLQIGGGINADNAQRFIDMGASHVIATSFVFR-DGEINY-DNLKALE 128
Query: 218 KS 219
K+
Sbjct: 129 KA 130
>gi|226225842|ref|YP_002759948.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Gemmatimonas aurantiaca T-27]
gi|226089033|dbj|BAH37478.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Gemmatimonas aurantiaca T-27]
Length = 319
Score = 41.7 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
H+ I+ + P TP+ + D ++++D ++ G L ++
Sbjct: 205 DNHLAAIGGDINMAVSRARQLAMPGTPIQVECDTLEQVDA----SLAAGADWILLDNMSL 260
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+R A R+I+ E GGV+ ++++ + G D + VG
Sbjct: 261 DMLRAAVQRCATRAIT-EASGGVSLETVRAIAETGVDRISVG 301
>gi|163854863|ref|YP_001629161.1| thiamine-phosphate pyrophosphorylase [Bordetella petrii DSM 12804]
gi|163258591|emb|CAP40890.1| thiamine-phosphate pyrophosphorylase [Bordetella petrii]
Length = 227
Score = 41.7 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 24/61 (39%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + R A G ++ GG+T N + QAGAD + V + F A+
Sbjct: 157 LGQARALTADRGAPRPAVVAIGGITPANAPQVAQAGADSIAVITGLFEAPDIRQAAQACA 216
Query: 215 D 215
Sbjct: 217 A 217
>gi|314937103|ref|ZP_07844450.1| 3-hexulose-6-phosphate synthase [Staphylococcus hominis subsp.
hominis C80]
gi|313655722|gb|EFS19467.1| 3-hexulose-6-phosphate synthase [Staphylococcus hominis subsp.
hominis C80]
Length = 210
Score = 41.7 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL++VG
Sbjct: 131 IAVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPETIKEIVAEEPDLVIVGG 188
Query: 199 SFFNQKGEISYAKRLND 215
N + AK+ +
Sbjct: 189 GIANADDPVEAAKQCRE 205
>gi|304316565|ref|YP_003851710.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778067|gb|ADL68626.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 344
Score = 41.7 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+RQ G ++ + V GG+T IK L +GAD VGS + I + +++
Sbjct: 263 LRQRLNQKGYNNVKIIVSGGLTPERIKELALSGADAFGVGSYI-SDASPIDMTMDIKEVE 321
Query: 218 KSALA 222
+A
Sbjct: 322 GEPIA 326
>gi|189345918|ref|YP_001942447.1| modD protein [Chlorobium limicola DSM 245]
gi|189340065|gb|ACD89468.1| modD protein [Chlorobium limicola DSM 245]
Length = 281
Score = 41.7 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ + GG+ + N G D+LV+ S +F + +IS
Sbjct: 236 PGVKISAAGGINADNAALYAGTGVDMLVLSSVYFGKPADISVV 278
>gi|328543433|ref|YP_004303542.1| Thiamine-phosphate pyrophosphorylase ThiE1 [polymorphum gilvum
SL003B-26A1]
gi|326413178|gb|ADZ70241.1| Thiamine-phosphate pyrophosphorylase ThiE1 [Polymorphum gilvum
SL003B-26A1]
Length = 201
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 6/143 (4%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
H DAG I E L I G + G++ + E + + +
Sbjct: 60 DHWRTAIDAGAAWIHLGQEDLDGAD--LAAIRRAGLRLGISTHTEAELDRALGFDPDY-V 116
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
L PG + +I KA I +++ GG+T ++ AGAD L
Sbjct: 117 ALGPIYEPGGKKVDFAPQGLARIGAWKARIACPLVAI---GGLTLERAPAVYAAGADSLC 173
Query: 196 VGSSFFNQKGEISYAKRLNDLKK 218
V + + + ++
Sbjct: 174 VITDVLAAADPEGRCRAWLEARQ 196
>gi|257077302|ref|ZP_05571663.1| nicotinate phosphoribosyltransferase [Ferroplasma acidarmanus fer1]
Length = 386
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ I +IR + G ++I + V GG+ +I L+ AG + +G+S
Sbjct: 244 PNLIREIRWELDIRGHKNIKIMVSGGIKLEDIPELISAGVESFGIGTSI 292
>gi|238026187|ref|YP_002910418.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
glumae BGR1]
gi|237875381|gb|ACR27714.1| 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate
[Burkholderia glumae BGR1]
Length = 226
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILED 128
+ + +++ +A AG ++I I K G+A P TP
Sbjct: 84 VLRPE-YVDEVARAGGELIVM-------PHADADVIR-RAKALGLACAPGVATPSEAFAA 134
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ D +L M F +QL + + +A+I R + V GGVT N+ +
Sbjct: 135 LRAGAD-VLKM-----FPAEQLGPIAL---KAWRAVIDARVPLVPV-GGVTPDNMGPYLS 184
Query: 189 AGADLLVVGSSFFN 202
AGA+ +GS+ +
Sbjct: 185 AGANGFGLGSALYK 198
>gi|254457553|ref|ZP_05070981.1| tryptophan synthase, alpha subunit [Campylobacterales bacterium GD
1]
gi|207086345|gb|EDZ63629.1| tryptophan synthase, alpha subunit [Campylobacterales bacterium GD
1]
Length = 245
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 16/151 (10%)
Query: 72 SSIDSHINIIADAGCDIITF----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
++D I + + G + + H E+ P+ A + P ++
Sbjct: 91 QNMDKLIPLASKLGVNGLIIPDLPHEEALPY----SDLFKANSMSNISFVAPTDSEERIK 146
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSL 186
+V+++ + M G G E+ P + K G GV ++ K
Sbjct: 147 EVVNDAQKFIYMVAYTGITGSGQAENLQPFLGSIKKYSPTPVYV----GFGVNAKTAKEK 202
Query: 187 VQAGADLLVVGSSFFN--QKGEISYAKRLND 215
V+ GAD ++VGS+F + K +SY+ ++
Sbjct: 203 VE-GADGVIVGSAFIDILLKDSLSYSDKIKQ 232
>gi|157164165|ref|YP_001467245.1| thiamine-phosphate pyrophosphorylase [Campylobacter concisus 13826]
gi|112801909|gb|EAT99253.1| thiamine-phosphate pyrophosphorylase [Campylobacter concisus 13826]
Length = 204
Score = 41.7 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +++AK ++ ++ + V GG+ NI SL A DL+ + S+ + K L
Sbjct: 141 LEVVKEAKQIL---NLPICVIGGINETNIGSLSHAKPDLIAIISAIYKDGNIKENIKNLQ 197
Query: 215 DLKKS 219
+ K+
Sbjct: 198 KIIKA 202
>gi|163867970|ref|YP_001609174.1| thiamine-phosphate pyrophosphorylase [Bartonella tribocorum CIP
105476]
gi|161017621|emb|CAK01179.1| thiamine-phosphate pyrophosphorylase [Bartonella tribocorum CIP
105476]
Length = 201
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
AD+ + + G K I + D F IS I+ ++ D + L+I+
Sbjct: 12 NADW------VERLVPLGVKLIQLRMKDEDF-QTIS---QHIKRAKNICDH-WGAQLIIN 60
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
H + D C I E + L I + GV+ + E + I V
Sbjct: 61 D---HWRMAIDEKCHFIHLGQEDLRNAD--LHAIRKNNIRFGVSTHDEHELDIALSVHP- 114
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + + P + + + KI+Q + IG + GG+ +++AG
Sbjct: 115 -DYIALGPIYPTILKKMKWQPQGLEKIKQWRKRIGA--LPFVGIGGLNPERAMDVLKAGT 171
Query: 192 D 192
+
Sbjct: 172 N 172
>gi|13936868|gb|AAK49975.1|AF358260_2 probable orotidine 5' monophosphate decarboxylase [Methanosarcina
thermophila]
Length = 221
Score = 41.7 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 84/215 (39%), Gaps = 9/215 (4%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA D + E + D + + ++ G +IR L ++ + D +
Sbjct: 8 ILALDVTDRDEALKIAEDV---WEFVDAIKVGYPLILTTGLGIIRELAEFAPVIADFKVA 64
Query: 71 -ISSIDSHI-NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
I + + I + + +AG D + + + I + +K ++ + E
Sbjct: 65 DIPNTNRLICDQVFEAGADAVIVQGFTGRDSLDACIEIASEYRKDVFVVSEMSHPGGAEF 124
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR--NIKSL 186
+ + I M + G G + ++R+ + +IG + + GV ++ +
Sbjct: 125 LQPAAESIAKMALEAGAFGLVAPATRPERVRKIRRIIGDKLTIISP--GVGAQGGKASDV 182
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ AG D ++VG S + + A+ + + ++ L
Sbjct: 183 IAAGTDWVIVGRSIYKAESPKEAAREIAEEIQAEL 217
>gi|254415614|ref|ZP_05029373.1| nicotinate-nucleotide pyrophosphorylase [Microcoleus chthonoplastes
PCC 7420]
gi|196177564|gb|EDX72569.1| nicotinate-nucleotide pyrophosphorylase [Microcoleus chthonoplastes
PCC 7420]
Length = 358
Score = 41.7 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETP-VAILEDVIDEIDMILIMTVNPGFGGQQL 150
H ++ I+ ++ I + I ET + + + +++ I+++ P
Sbjct: 241 HIVAAGSIKDAIARIREQMPYP-LRIEVETETLEQVTEALEQGADIIMLDNMP------- 292
Query: 151 IESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLL 194
+ ++RQA I ++ + +E G +T I+++ Q G D +
Sbjct: 293 ----LERMRQAVHKIRGKNDRLKIEASGNITLDTIRAVAQTGVDYI 334
>gi|20807358|ref|NP_622529.1| nicotinate phosphoribosyltransferase [Thermoanaerobacter
tengcongensis MB4]
gi|20515875|gb|AAM24133.1| Nicotinic acid phosphoribosyltransferase [Thermoanaerobacter
tengcongensis MB4]
Length = 344
Score = 41.3 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKRSI---SLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + + + ++ + V GG+T + L ++GAD VGS
Sbjct: 260 VYELRQRLNQKGFSHVKIIVSGGLTPERVALLAESGADAFGVGSYI 305
>gi|282918358|ref|ZP_06326095.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus C427]
gi|282317492|gb|EFB47864.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus C427]
Length = 210
Score = 41.3 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKEIVAESPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N I AK+
Sbjct: 184 VIVGGGIANADDPIEAAKQCRA 205
>gi|108805577|ref|YP_645514.1| thiamine-phosphate pyrophosphorylase [Rubrobacter xylanophilus DSM
9941]
gi|108766820|gb|ABG05702.1| thiamine-phosphate pyrophosphorylase [Rubrobacter xylanophilus DSM
9941]
Length = 208
Score = 41.3 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 158 IRQ-AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
IR+ A+A + ++ GGVT + AGA V + + + A+ L L
Sbjct: 149 IREMARAALPVPWFAI---GGVTLETAGEVAAAGAPGFAVVRAVLDAEDPEEAARSLRAL 205
>gi|302392782|ref|YP_003828602.1| thiamine-phosphate diphosphorylase [Acetohalobium arabaticum DSM
5501]
gi|302204859|gb|ADL13537.1| thiamine-phosphate diphosphorylase [Acetohalobium arabaticum DSM
5501]
Length = 213
Score = 41.3 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + + K I + GG+ NI ++ AGAD++ V S+ + + L +
Sbjct: 147 LNRLAEIKSKVDIPVAAIGGLNQDNISEVIAAGADVISVISAVTQAEDIEWKTEELKGII 206
Query: 218 KSA 220
K A
Sbjct: 207 KEA 209
>gi|20139591|sp|Q977X5|PYRF_METTE RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
Length = 215
Score = 41.3 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 84/215 (39%), Gaps = 9/215 (4%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA D + E + D + + ++ G +IR L ++ + D +
Sbjct: 2 ILALDVTDRDEALKIAEDV---WEFVDAIKVGYPLILTTGLGIIRELAEFAPVIADFKVA 58
Query: 71 -ISSIDSHI-NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
I + + I + + +AG D + + + I + +K ++ + E
Sbjct: 59 DIPNTNRLICDQVFEAGADAVIVQGFTGRDSLDACIEIASEYRKDVFVVSEMSHPGGAEF 118
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR--NIKSL 186
+ + I M + G G + ++R+ + +IG + + GV ++ +
Sbjct: 119 LQPAAESIAKMALEAGAFGLVAPATRPERVRKIRRIIGDKLTIISP--GVGAQGGKASDV 176
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ AG D ++VG S + + A+ + + ++ L
Sbjct: 177 IAAGTDWVIVGRSIYKAESPKEAAREIAEEIQAEL 211
>gi|15669727|ref|NP_248540.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase HisA1 [Methanocaldococcus jannaschii DSM 2661]
gi|2842608|sp|Q58927|HIS4_METJA RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|1592163|gb|AAB99553.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase (hisA1) [Methanocaldococcus jannaschii DSM
2661]
Length = 237
Score = 41.3 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 84/215 (39%), Gaps = 28/215 (13%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI 80
E GA+ +H +D F + DVI+++ + + I +++
Sbjct: 34 EVAKKFVDEGAEYLHIIDLDAAFGTGNN--RDVIKNIIKEVNVPVEVGGGIRNLE-IAKE 90
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKK-TGVAINPE---------------TPVA 124
+ G D + ++ + +GK +A+ + TP+
Sbjct: 91 LISLGVDRVIVGTKAILEPKFIDDLNKEIGKDKIVLAVECKEGKVVIKGWKEKVDKTPIE 150
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNI 183
++++ D++ IL V+ + + + K LI K I + GG+T +I
Sbjct: 151 VIKEFEDKVGYILFTNVDVEGLLKGIN------VDIIKELIEKTDIPIIYSGGITTLEDI 204
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
K+L + G +V+GS+ + KG I K L +K
Sbjct: 205 KALKELGIYGVVIGSALY--KGLIDLKKALEIVKN 237
>gi|126737329|ref|ZP_01753064.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Roseobacter sp.
SK209-2-6]
gi|126721914|gb|EBA18617.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Roseobacter sp.
SK209-2-6]
Length = 208
Score = 41.3 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 32/152 (21%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPE--TPVAILEDVIDEI 133
+ +ADAG I P +P + R G+ P TP +
Sbjct: 75 DQVEAVADAGG-RIIVSPNMNPDVGR-------KAVSRGLYWCPGVMTPSEAFAAL---- 122
Query: 134 DMILIMTVNPGFGGQQLIESTI---PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+ G + + + I +A++ K ++ V GG+T + AG
Sbjct: 123 --------DIGASVLKFFPAELVPPAAIAAMRAVLPKNAVVAAV-GGITPETMAPYHAAG 173
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
D +GS+ F SYA L+D+ + A A
Sbjct: 174 VDGYGLGSALFK----PSYA--LDDIARRARA 199
>gi|13542074|ref|NP_111762.1| nicotinate phosphoribosyltransferase [Thermoplasma volcanium GSS1]
Length = 392
Score = 41.3 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 158 IRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+R+ K AL G+ I + V GG+ + L +AGA VG+S
Sbjct: 250 VREVKWELALRGRSDIKIMVSGGLDENTVAKLREAGAQAFGVGTSI 295
>gi|309388714|gb|ADO76594.1| thiamine-phosphate pyrophosphorylase [Halanaerobium praevalens DSM
2228]
Length = 219
Score = 41.3 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 4/131 (3%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGV-AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ 149
H S ++ R + K G+ A P D + + + +
Sbjct: 84 VHLGQSDLPLKAARKVLGKDKIIGISAWKPAEIKEAEAGGADYLGVGAVFSTKSKKLNSA 143
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ KI + + + L GG+ N ++++GAD + V S+ K +
Sbjct: 144 KNGIGLAKINEIRKTTK---LPLVAIGGLNKENAAEVIKSGADCISVISALTKAKKVKAE 200
Query: 210 AKRLNDLKKSA 220
K ++ ++A
Sbjct: 201 TKEFKNIIQTA 211
>gi|254478309|ref|ZP_05091689.1| Quinolinate phosphoribosyl transferase, C-terminal domain protein
[Carboxydibrachium pacificum DSM 12653]
gi|214035774|gb|EEB76468.1| Quinolinate phosphoribosyl transferase, C-terminal domain protein
[Carboxydibrachium pacificum DSM 12653]
Length = 344
Score = 41.3 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKRSI---SLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + + + ++ + V GG+T + L ++GAD VGS
Sbjct: 260 VYELRQRLNQKGFSHVKIIVSGGLTPERVALLAESGADAFGVGSYI 305
>gi|323704284|ref|ZP_08115863.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536350|gb|EGB26122.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 344
Score = 41.3 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 158 IRQAKALIGKRSIS---LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + + + ++ + V GG+T IK L +GAD VGS + I +
Sbjct: 260 VYELRQRLNQKGFDNVKIIVSGGLTPERIKELALSGADAFGVGSYI-SDASPIDMTMDIK 318
Query: 215 DLKKSALA 222
+++ +A
Sbjct: 319 EVEGEPIA 326
>gi|313107169|ref|ZP_07793369.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
39016]
gi|310879871|gb|EFQ38465.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
39016]
Length = 282
Score = 41.3 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 173 HIAACGGIHRAIAEARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 221 ELSLDDMRTAVALTAGRA-KLEASGGINESTLRNIAETGVDYISIGT 266
>gi|14325505|dbj|BAB60408.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 395
Score = 41.3 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 158 IRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+R+ K AL G+ I + V GG+ + L +AGA VG+S
Sbjct: 253 VREVKWELALRGRSDIKIMVSGGLDENTVAKLREAGAQAFGVGTSI 298
>gi|308175557|ref|YP_003922262.1| thiamine-phosphate pyrophosphorylase [Bacillus amyloliquefaciens
DSM 7]
gi|307608421|emb|CBI44792.1| thiamine-phosphate pyrophosphorylase [Bacillus amyloliquefaciens
DSM 7]
gi|328555535|gb|AEB26027.1| thiamine-phosphate pyrophosphorylase [Bacillus amyloliquefaciens
TA208]
gi|328913908|gb|AEB65504.1| thiamine-phosphate pyrophosphorylase [Bacillus amyloliquefaciens
LL3]
Length = 222
Score = 41.3 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDL 216
I + + +I + GG+T+ N +++AGAD + + S+ + + A+R ++
Sbjct: 158 IEEVRRQGI--TIPIVGIGGITADNAAPVIEAGADGVSMISAISQAEDPKAAARRFFEEV 215
Query: 217 KKS 219
++S
Sbjct: 216 RRS 218
>gi|261855840|ref|YP_003263123.1| thiamine-phosphate pyrophosphorylase [Halothiobacillus neapolitanus
c2]
gi|261836309|gb|ACX96076.1| thiamine-phosphate pyrophosphorylase [Halothiobacillus neapolitanus
c2]
Length = 216
Score = 41.3 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + + GG+T ++ L+ AGAD+L V S+ F+ + A+ + L
Sbjct: 156 LIESKQKLGVPICAIGGITRQSAPELIGAGADMLAVISAVFSATDIQAAARDFSTL 211
>gi|92118393|ref|YP_578122.1| thiamine-phosphate diphosphorylase [Nitrobacter hamburgensis X14]
gi|91801287|gb|ABE63662.1| thiamine-phosphate diphosphorylase [Nitrobacter hamburgensis X14]
Length = 208
Score = 41.3 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
IPKI + K +G +I L GG+ + AGAD + V S +
Sbjct: 139 FAPQGIPKIAEWKKRVG--NIPLVAIGGIKLEQAAEIFDAGADSIAVVSDVTQNPDPDAR 196
Query: 210 AKRLND 215
K +
Sbjct: 197 VKAWLE 202
>gi|297539928|ref|YP_003675697.1| thiamine-phosphate pyrophosphorylase [Methylotenera sp. 301]
gi|297259275|gb|ADI31120.1| thiamine-phosphate pyrophosphorylase [Methylotenera sp. 301]
Length = 211
Score = 41.3 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL-KKSA 220
K + I GG+T N+ S++QAGA+ + V ++ FN A++ L K+S
Sbjct: 147 KQANAQLHIPAVAIGGITLENVPSVIQAGANSIAVINAIFNADDVKLAAQQFARLFKEST 206
Query: 221 LAI 223
L
Sbjct: 207 LKA 209
>gi|11499192|ref|NP_070428.1| tryptophan synthase subunit alpha [Archaeoglobus fulgidus DSM 4304]
gi|3334388|sp|O28673|TRPA_ARCFU RecName: Full=Tryptophan synthase alpha chain
gi|2648961|gb|AAB89650.1| tryptophan synthase, subunit alpha (trpA) [Archaeoglobus fulgidus
DSM 4304]
Length = 248
Score = 41.3 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 20/182 (10%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLR 104
++ ++ R+ SD + + +S + +G D + +
Sbjct: 68 FEIAKAFRAESDKPL-VLMSYYNPIYRRGVESFVEKAYSSGIDAMLVVDLPYDEAGDFVE 126
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ--LIESTIPKIRQAK 162
G K P TP L + + + +++ G G++ + +++AK
Sbjct: 127 VCSRTGMKNVFLAAPNTPEDRLRAMDELSAFVYLVSTY-GVTGERDRISPLAFEALKRAK 185
Query: 163 ALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISYAKRLNDLK 217
+ K + V G GV+ + +++ L+ AGAD +VVGS+ N+KGE + + L
Sbjct: 186 GICRKP---VAV-GFGVSKADHVRQLISAGADGVVVGSAFVRLINEKGE-RATEDIRALT 240
Query: 218 KS 219
++
Sbjct: 241 EN 242
>gi|222445505|ref|ZP_03608020.1| hypothetical protein METSMIALI_01145 [Methanobrevibacter smithii
DSM 2375]
gi|261349934|ref|ZP_05975351.1| enzyme fae/hps [Methanobrevibacter smithii DSM 2374]
gi|222435070|gb|EEE42235.1| hypothetical protein METSMIALI_01145 [Methanobrevibacter smithii
DSM 2375]
gi|288860718|gb|EFC93016.1| enzyme fae/hps [Methanobrevibacter smithii DSM 2374]
Length = 408
Score = 41.3 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I+ K LIG + V GG+T ++ GAD+++ G + A+
Sbjct: 333 IKSIKKLIG--DGLVAVAGGITPNKVEEATSKGADIIIAGRYIIGSRDVRRAAE 384
>gi|14590608|ref|NP_142676.1| orotidine 5'-phosphate decarboxylase [Pyrococcus horikoshii OT3]
gi|3257139|dbj|BAA29822.1| 241aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 241
Score = 41.3 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 156 PKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL- 213
+I + + + I + G G K V+AGAD ++VG + +N AK +
Sbjct: 177 ERIGYIRDRLKE-GIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIY 235
Query: 214 NDLK 217
++++
Sbjct: 236 DEIR 239
>gi|307941930|ref|ZP_07657283.1| thiamine-phosphate pyrophosphorylase [Roseibium sp. TrichSKD4]
gi|307774836|gb|EFO34044.1| thiamine-phosphate pyrophosphorylase [Roseibium sp. TrichSKD4]
Length = 202
Score = 41.3 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 15/172 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
I + G K + V D D +R+ + S+ D + I+ +
Sbjct: 16 IERLGPLGLKLVQLRVKD--------LEDDDLRAEIRSAKSICDRLGVTLVINDFWQMAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+ C+ I E + L I A G K G++ + + + + + D I + V
Sbjct: 68 EEKCNWIHLGQEDLTDVD--LDAIRAAGLKFGLSSHDDAELDT--AIAAKPDYIALGPVF 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
P + + + K+R K IG I L GG+T + + GAD+
Sbjct: 124 PTILKKMKWAPQGLEKLRIWKERIG--DIPLVAIGGLTPERASAALDHGADI 173
>gi|254470542|ref|ZP_05083946.1| thiamine-phosphate pyrophosphorylase [Pseudovibrio sp. JE062]
gi|211960853|gb|EEA96049.1| thiamine-phosphate pyrophosphorylase [Pseudovibrio sp. JE062]
Length = 200
Score = 41.3 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 51/172 (29%), Gaps = 14/172 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + G K + D D IRS + + D + ++ H
Sbjct: 15 LPRVLPLGVKFCQLRIKDK--------SEDEIRSQVREAKQLCDKAGAVLVVNDHWQAAY 66
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
DA + E R + + G G++ + E + +D + L N
Sbjct: 67 DANVGYVHLGQEDLKTAD--FRALRSAGIYYGISTHYEAELDTALA-LDPEYVALGPIYN 123
Query: 143 PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ K + + L GG+T + AGAD +
Sbjct: 124 STSKEMHWQPQGLE---TLKKWRERTNNHLVAIGGITLERASDVFSAGADSI 172
>gi|78224105|ref|YP_385852.1| phosphomethylpyrimidine kinase [Geobacter metallireducens GS-15]
gi|78195360|gb|ABB33127.1| Phosphomethylpyrimidine kinase [Geobacter metallireducens GS-15]
Length = 497
Score = 41.3 bits (96), Expect = 0.099, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + GG++ N +V AGAD L V S+ A L
Sbjct: 170 IPIVAIGGISRDNGPRVVDAGADALAVISAVLAHPDPFLAATEL 213
>gi|89098839|ref|ZP_01171720.1| HxlA [Bacillus sp. NRRL B-14911]
gi|89086515|gb|EAR65635.1| HxlA [Bacillus sp. NRRL B-14911]
Length = 210
Score = 41.3 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 95/212 (44%), Gaps = 11/212 (5%)
Query: 12 LAADFSRLGEEISNITKAGAKQIHFDVMD-GCFVPNISFGADVIRSLRS-YSDSVFDCHL 69
LA D + E I + + H DV++ G V I+ G ++ ++ + + L
Sbjct: 5 LALDLVNIPEAIELVKEVEE---HIDVVEIGTPV-VINEGLKAVKEVKEAFPNLKVLADL 60
Query: 70 MISSIDSH-INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILE 127
I + + ++AG DIIT + I+ ++ GKK V + +
Sbjct: 61 KIMDAAGYEVMKASEAGADIITILGAAEDESIKGAVEEAKKQGKKILVDMIAVKDLEGRA 120
Query: 128 DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
+DE+ + + V+ G+ Q + +++ ++ K+++ ++ + GG+ + +V
Sbjct: 121 KELDELG-VDYICVHTGYDLQAVGQNSFEDLKTIKSVV--KNAKTAIAGGIKLETLPEVV 177
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+A DL++VG +Q + + A ++ ++ K
Sbjct: 178 KAQPDLVIVGGGITSQDDKKAAASKMQEIIKQ 209
>gi|281346426|gb|EFB22010.1| hypothetical protein PANDA_016670 [Ailuropoda melanoleuca]
Length = 206
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 169 SISLEVDGGVTSRNIKSLV-QAGADLLVVGSSFFNQKGEISYAKRLND 215
++ +VD V QAGA+++V GS+ S L +
Sbjct: 151 TLWYQVDDCVKP-----CAPQAGANMIVSGSAIMRSDDPRSVINLLRN 193
>gi|240145887|ref|ZP_04744488.1| thiamine-phosphate diphosphorylase [Roseburia intestinalis L1-82]
gi|257202035|gb|EEV00320.1| thiamine-phosphate diphosphorylase [Roseburia intestinalis L1-82]
gi|291535422|emb|CBL08534.1| thiamine-phosphate diphosphorylase [Roseburia intestinalis M50/1]
Length = 212
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + I + GG++ NI L G D + V S+ F QK + A+ L L
Sbjct: 151 LKEICAAVQIPVVAIGGISRDNILQLKGTGIDGVAVISAIFAQKDIRAAAQELRKL 206
>gi|146297672|ref|YP_001181443.1| nicotinate phosphoribosyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411248|gb|ABP68252.1| Quinolinate phosphoribosyl transferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 343
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
PG G + + ++R+ L G + + V GG+ IK+L +AGAD VGS
Sbjct: 247 TPGERG-GVTPELVYEVRKRLDLEGFSHVKIFVSGGLYPEKIKALSEAGADAFGVGSYI- 304
Query: 202 NQKGEISYAKRLND 215
+ I + +
Sbjct: 305 SSAPPIDMTMDIKE 318
>gi|148643273|ref|YP_001273786.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanobrevibacter smithii ATCC 35061]
gi|148552290|gb|ABQ87418.1| 3-hexulose 6-phosphate synthase/formaldehyde activating enzyme
[Methanobrevibacter smithii ATCC 35061]
Length = 408
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I+ K LIG + V GG+T ++ GAD+++ G + A+
Sbjct: 333 IKSIKKLIG--DGLVAVAGGITPNKVEEATSKGADIIIAGRYIIGSRDVRRAAE 384
>gi|291537933|emb|CBL11044.1| thiamine-phosphate diphosphorylase [Roseburia intestinalis XB6B4]
Length = 212
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + I + GG++ NI L G D + V S+ F QK + A+ L L
Sbjct: 151 LKEICAAVQIPVVAIGGISRDNILQLKGTGIDGVAVISAIFAQKDIRAAAQELRKL 206
>gi|210615359|ref|ZP_03290523.1| hypothetical protein CLONEX_02739 [Clostridium nexile DSM 1787]
gi|210150386|gb|EEA81395.1| hypothetical protein CLONEX_02739 [Clostridium nexile DSM 1787]
Length = 214
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+QA + +++ GGVT+ N K + AGA ++V S F GE+ + + L LK+
Sbjct: 89 KQALEALRAYPQGMQIGGGVTAENAKEYLDAGASHVIVTSYVFR-DGEVKW-ENLQKLKE 146
>gi|210615397|ref|ZP_03290524.1| hypothetical protein CLONEX_02740 [Clostridium nexile DSM 1787]
gi|210150246|gb|EEA81255.1| hypothetical protein CLONEX_02740 [Clostridium nexile DSM 1787]
Length = 200
Score = 41.3 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+QA + +++ GGVT+ N K + AGA ++V S F GE+ + + L LK+
Sbjct: 10 KQALEALRAYPQGMQIGGGVTAENAKEYLDAGASHVIVTSYVFR-DGEVKW-ENLQKLKE 67
>gi|312195800|ref|YP_004015861.1| dihydroorotate oxidase [Frankia sp. EuI1c]
gi|311227136|gb|ADP79991.1| dihydroorotate oxidase [Frankia sp. EuI1c]
Length = 306
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ---AGADLLVVGSSF 200
G G L + ++RQ + L+ S+ + GGVT + + AGA+ + V +++
Sbjct: 226 GLAGPALRPVALGQVRQLRRLLPA-SVEIVGAGGVT--TGRDVADFLRAGANAVQVATAY 282
Query: 201 FNQKGEISYAKRLNDLKKSALA 222
+N+ G+ + + ALA
Sbjct: 283 WNRDGDPAVFGVIAAEWAEALA 304
>gi|315647814|ref|ZP_07900915.1| 3-hexulose-6-phosphate synthase [Paenibacillus vortex V453]
gi|315276460|gb|EFU39803.1| 3-hexulose-6-phosphate synthase [Paenibacillus vortex V453]
Length = 210
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +++ ++ K ++ ++ V GG+ + ++QA DL++VG
Sbjct: 131 ICVHSGYDHQAEGKNSFEELAAIKRVV--KNAKTAVAGGIKLETLPEVIQANPDLVIVGG 188
Query: 199 SFFNQKGEISYAKRLNDLKKSA 220
Q + + A ++ K A
Sbjct: 189 GITGQSDKKAAAAQMQQWVKQA 210
>gi|302332283|gb|ADL22476.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 210
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK++V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKTIVAENPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 VIVGGGIANADDPVEAAKQCRA 205
>gi|39936638|ref|NP_948914.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
CGA009]
gi|39650494|emb|CAE29017.1| thiamin phosphate pyrophosphorylase [Rhodopseudomonas palustris
CGA009]
Length = 202
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H L I + G G++ + + + + E D I + + P
Sbjct: 74 HLHLGQEDLAEADLHEIKSAGLTLGLSTHDDAELET--ALAAEPDYIALGPIFPTTLKSM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ IPKI + K +G +I L GG+ + + AGAD + V S +
Sbjct: 132 RFAPQGIPKITEWKKRVG--NIPLVAIGGIKLEQAEEIFAAGADSIAVVSDVTQNPDPDA 189
Query: 209 YAKRLNDL 216
+ D
Sbjct: 190 RVRAWLDF 197
>gi|21282254|ref|NP_645342.1| hypothetical protein MW0525 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482799|ref|YP_040023.1| hexulose-6-phosphate synthase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485435|ref|YP_042656.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|253731181|ref|ZP_04865346.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257424687|ref|ZP_05601114.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427356|ref|ZP_05603755.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257429990|ref|ZP_05606374.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257432692|ref|ZP_05609052.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus E1410]
gi|257435594|ref|ZP_05611642.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus M876]
gi|258423978|ref|ZP_05686861.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9635]
gi|282903160|ref|ZP_06311051.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus C160]
gi|282904949|ref|ZP_06312807.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282907903|ref|ZP_06315737.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910213|ref|ZP_06318017.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282913405|ref|ZP_06321194.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus M899]
gi|282915894|ref|ZP_06323659.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus D139]
gi|282923323|ref|ZP_06331003.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus C101]
gi|283769725|ref|ZP_06342617.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus H19]
gi|283957371|ref|ZP_06374824.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293500453|ref|ZP_06666304.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293509396|ref|ZP_06668107.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus M809]
gi|293523984|ref|ZP_06670671.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus M1015]
gi|295427111|ref|ZP_06819747.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297208715|ref|ZP_06925143.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297590538|ref|ZP_06949177.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus MN8]
gi|300912805|ref|ZP_07130247.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus TCH70]
gi|81649887|sp|Q6GBR7|HPS_STAAS RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|81651682|sp|Q6GJ99|HPS_STAAR RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|81762794|sp|Q8NXX1|HPS_STAAW RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|21203690|dbj|BAB94390.1| MW0525 [Staphylococcus aureus subsp. aureus MW2]
gi|49240928|emb|CAG39595.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49243878|emb|CAG42303.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|253724922|gb|EES93651.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257272257|gb|EEV04380.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275549|gb|EEV07022.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257279187|gb|EEV09788.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257282107|gb|EEV12242.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus E1410]
gi|257284785|gb|EEV14904.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus M876]
gi|257845832|gb|EEV69863.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9635]
gi|282314191|gb|EFB44581.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus C101]
gi|282320190|gb|EFB50535.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus D139]
gi|282322437|gb|EFB52759.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus M899]
gi|282325605|gb|EFB55913.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282328148|gb|EFB58427.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331774|gb|EFB61285.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282596115|gb|EFC01076.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus C160]
gi|283459872|gb|EFC06962.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus H19]
gi|283469862|emb|CAQ49073.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus ST398]
gi|283790822|gb|EFC29637.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290920947|gb|EFD98008.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus M1015]
gi|291095458|gb|EFE25719.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467493|gb|EFF10008.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus M809]
gi|295128899|gb|EFG58529.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296886660|gb|EFH25565.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297576837|gb|EFH95552.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus MN8]
gi|298693901|gb|ADI97123.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
aureus subsp. aureus ED133]
gi|300885909|gb|EFK81112.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus TCH70]
gi|312439009|gb|ADQ78080.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus TCH60]
gi|315193938|gb|EFU24332.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus CGS00]
gi|323439478|gb|EGA97200.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus O11]
gi|323441325|gb|EGA98989.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus O46]
Length = 210
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKEIVAESPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 VIVGGGIANADDPVEAAKQCRA 205
>gi|269119777|ref|YP_003307954.1| thiamine-phosphate pyrophosphorylase [Sebaldella termitidis ATCC
33386]
gi|268613655|gb|ACZ08023.1| thiamine-phosphate pyrophosphorylase [Sebaldella termitidis ATCC
33386]
Length = 197
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + + K I + GG+ + N L AGAD + V S+ +K A +L
Sbjct: 139 LEELGEIKKKVQIPVVAIGGINAENAGQLFCAGADGIAVVSAILGEKNIKEAALKL 194
>gi|294338678|emb|CAZ87007.1| Putative Nicotinate-nucleotide diphosphorylase ModD [Thiomonas sp.
3As]
Length = 279
Score = 41.3 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ Q +AL + +++ GG+ N + +G D+LV SS +N K + + L
Sbjct: 225 VPQLRAL--QPRLTINAAGGIRPDNAAAFAASGVDVLVT-SSLYNAK-AADFGAVMQRL 279
>gi|296134713|ref|YP_003641955.1| modD protein [Thiomonas intermedia K12]
gi|295794835|gb|ADG29625.1| modD protein [Thiomonas intermedia K12]
Length = 280
Score = 40.9 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ Q +AL + +++ GG+ N + +G D+LV SS +N K + + L
Sbjct: 226 VPQLRAL--QPRLTINAAGGIRPDNAAAFAASGVDVLVT-SSLYNAK-AADFGAVMQRL 280
>gi|325681371|ref|ZP_08160897.1| thiamine-phosphate diphosphorylase [Ruminococcus albus 8]
gi|324106861|gb|EGC01151.1| thiamine-phosphate diphosphorylase [Ruminococcus albus 8]
Length = 409
Score = 40.9 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
SI GG++ NI +L GA+ V S+ F S RL +L
Sbjct: 357 SIPCVAIGGISLENIGTLAGMGAEGFAVVSAVFGADDIESRTARLKEL 404
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + G I + GG++ N +++AGAD + V S F ++L ++
Sbjct: 142 VRKVSGAVDIPVYGIGGISPENAGKVIRAGADGVCVMSG-FMSGEPHMLTEKLREVMN 198
>gi|160902483|ref|YP_001568064.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Petrotoga mobilis
SJ95]
gi|160360127|gb|ABX31741.1| histidine biosynthesis protein [Petrotoga mobilis SJ95]
Length = 234
Score = 40.9 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P+ I ++ +D+I I+ ++ F G ++ + K +I K + +E+ GG+
Sbjct: 34 YGDPIEIAKEFSKYVDLIHIVDLDGAFEG------SVKNLDVVKQIIQKTGLKVELGGGL 87
Query: 179 -TSRNIKSLVQAGADLLVVGSSFFN 202
T +IK + G +++G++ FN
Sbjct: 88 RTFESIKDAYEIGVTYVIIGTAAFN 112
>gi|153007626|ref|YP_001368841.1| thiamine-phosphate pyrophosphorylase [Ochrobactrum anthropi ATCC
49188]
gi|151559514|gb|ABS13012.1| Thiamine-phosphate diphosphorylase [Ochrobactrum anthropi ATCC
49188]
Length = 209
Score = 40.9 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 15/173 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + G K + V D +RS + + H ++ + +
Sbjct: 16 LERMVPLGVKLVQLRVKDK--------SEPELRSEIRAAREICLAHNCQLIVNDYWKLAL 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+ GCD I E L I G K GV+ + E + V + D I + +
Sbjct: 68 EEGCDFIHLGQEDLDDAD--LSAIRDGGLKLGVSSHDEAELDRALSV--KPDYIALGPIY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
P + + E +P++ Q KA IG I L GG++ + +AGAD++
Sbjct: 124 PTILKKMKWHEQGLPRLGQWKARIG--DIPLVGIGGMSVERAPGVFEAGADIV 174
>gi|110596765|ref|ZP_01385055.1| modD protein [Chlorobium ferrooxidans DSM 13031]
gi|110341452|gb|EAT59912.1| modD protein [Chlorobium ferrooxidans DSM 13031]
Length = 311
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ + + S+ + GG+T N ++G D++V+ S +F + +I A
Sbjct: 229 VPEIRKQ--APSVKISAAGGITKNNAADYAKSGVDIIVLSSVYFGKPSDIGVA 279
>gi|323490282|ref|ZP_08095497.1| thiamine-phosphate pyrophosphorylase [Planococcus donghaensis
MPA1U2]
gi|323395952|gb|EGA88783.1| thiamine-phosphate pyrophosphorylase [Planococcus donghaensis
MPA1U2]
Length = 217
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I + K + + GG+T N + +AGA + V S+ N K K
Sbjct: 154 IIEVKQ--EYPHLPIVGIGGITPENADQVWRAGASGIAVISAITNAKDIAEQVKAFQ 208
>gi|222081140|ref|YP_002540503.1| thiamine-phosphate pyrophosphorylase protein [Agrobacterium
radiobacter K84]
gi|221725819|gb|ACM28908.1| thiamine-phosphate pyrophosphorylase protein [Agrobacterium
radiobacter K84]
Length = 204
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 21/181 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ I+ + G K + + D IR+ + ++ H
Sbjct: 12 SADW------IARLVPLGVKLVQLRIKDRT--------PSEIRAEIQRAKAICAAHQCQL 57
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
++ + + + GCD I H L I G K G++ + + +
Sbjct: 58 IVNDYWQLAIEEGCDFI--HLGQEDLAVADLSAIRKAGLKLGLSTH--DEAELATALAAS 113
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + V P + + ++R+ K IG + L GG+ I + + GA
Sbjct: 114 PDYIALGPVYPTILKKMPWAPQGLDRLREWKDRIG--GLPLVAIGGLNLDRIAGVFENGA 171
Query: 192 D 192
D
Sbjct: 172 D 172
>gi|57234415|ref|YP_181514.1| thiamine-phosphate pyrophosphorylase [Dehalococcoides ethenogenes
195]
gi|57224863|gb|AAW39920.1| ThiE-associated domain protein/thiamine-phosphate pyrophosphorylase
[Dehalococcoides ethenogenes 195]
Length = 352
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
KA+ I L GG+ N +QAGAD L + S+ L ++A
Sbjct: 290 LKAIHQVVKIPLVAIGGINKSNFYEAMQAGADSLCLISAVLGAPDIKKATSEFITLMEAA 349
>gi|85715981|ref|ZP_01046958.1| thiamine monophosphate synthase [Nitrobacter sp. Nb-311A]
gi|85697179|gb|EAQ35060.1| thiamine monophosphate synthase [Nitrobacter sp. Nb-311A]
Length = 202
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H + I G G++ + + + + E D I + + P
Sbjct: 74 HVHLGQEDLAAADVHEIRKAGLTLGLSTHDDAELDS--ALAAEPDYIALGPIFPTTLKAM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ IPKI + K +G +I L GG+ + AGAD + V S +
Sbjct: 132 RFAPQGIPKITEWKRRVG--NIPLVAIGGIKLEQAAEIFAAGADSIAVVSDVTQNPDPDA 189
Query: 209 YAKRLND 215
K +
Sbjct: 190 RVKAWLE 196
>gi|114566185|ref|YP_753339.1| thiamine-phosphate diphosphorylase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|122318721|sp|Q0AZ86|THIE_SYNWW RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|114337120|gb|ABI67968.1| Thiamine-phosphate diphosphorylase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 209
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + + I I L GG+ N+K + + GAD V S+ A++L
Sbjct: 147 LEFLASLRQEIK---IPLVAIGGINKENLKMIKETGADGAAVISALMGASDIEGEARKLR 203
Query: 215 DL 216
+
Sbjct: 204 QI 205
>gi|269121858|ref|YP_003310035.1| modD protein [Sebaldella termitidis ATCC 33386]
gi|268615736|gb|ACZ10104.1| modD protein [Sebaldella termitidis ATCC 33386]
Length = 281
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
+ ++ I + LED + +M G G Q +
Sbjct: 174 DGLAEKIKEIKQYCCEK----KIIAEAESLEDGLRLAEM--------GVDGIQFDKLKPE 221
Query: 157 KIRQAKALIGKRSISLE--VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++++A I K++ + GG+ +NI + V+ G D +V +S +N K +L
Sbjct: 222 ELKEAVIWIKKKTPHISLLAAGGINEKNISAYVKTGVDGVVT-TSLYNAK-PADVGVKLE 279
Query: 215 DL 216
L
Sbjct: 280 ML 281
>gi|325957830|ref|YP_004289296.1| Bifunctional enzyme fae/hps [Methanobacterium sp. AL-21]
gi|325329262|gb|ADZ08324.1| Bifunctional enzyme fae/hps [Methanobacterium sp. AL-21]
Length = 406
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 11/173 (6%)
Query: 49 FGADVIRSLRS-YSDSVFDCHLMISSIDSH-INIIADAGCDIITFH-PESSPHIRRSLRT 105
FG +I +R D+ L + + + AD D I + I +++
Sbjct: 212 FGVGIIGKIRELKKDAFIIADLKTLDVGRIEVKMAADETADAIAISGLGTVESIEKAIHE 271
Query: 106 IHAMGKKTGV-AINPETPVAILEDVIDEIDMILI-----MTVNPGFGGQQLIEST-IPKI 158
G + + +N E V LE V + D++L+ + G++L E T I
Sbjct: 272 AKKQGIYSILDMMNVENFVEKLEAVQFKPDIVLLHRNVDLETMQAERGEELAEVTEWGNI 331
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
Q K+++G+ + + V GG+T + + + AD++VVG + A+
Sbjct: 332 HQIKSILGEGKL-VAVAGGITPDRVDKAIDSDADIIVVGRYIIGSRDVRRSAQ 383
>gi|237746999|ref|ZP_04577479.1| thiamine-phosphate pyrophosphorylase [Oxalobacter formigenes
HOxBLS]
gi|229378350|gb|EEO28441.1| thiamine-phosphate pyrophosphorylase [Oxalobacter formigenes
HOxBLS]
Length = 203
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
V GG++ N LV+ GAD++ V S + Q + A+ L K
Sbjct: 159 VIGGMSVENAIPLVELGADMVAVVSGVYFQDDPEAAARGFAQLFK 203
>gi|168263489|ref|ZP_02685462.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205348003|gb|EDZ34634.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
Length = 279
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 45/183 (24%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
EI I +AGA +H D D V H ++D++I
Sbjct: 122 ETEILEIARAGADGLHTHKSD----------------WDDLQDIVNLAHQYGLTVDAYIG 165
Query: 80 IIADAGCDIITFH-PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
D I PE + + ++ I +DMI +
Sbjct: 166 HPDDLHTFGIPARTPEEVASVAKRMQDI-------------------------GVDMIGL 200
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
MT G I I + +AL+G + +GG+ N K+ G ++LVVG
Sbjct: 201 MTGMSYEGVAAGDIPQMIK--DRLRALVGAVDVPTLAEGGINLANAKAFKDTGVNILVVG 258
Query: 198 SSF 200
++
Sbjct: 259 TAI 261
>gi|903946|gb|AAA96743.1| pentose-5-phosphate-3-epimerase [Xanthobacter flavus]
Length = 33
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1 MTPSI-QIVPSILAADFSRLGEEISNITKA 29
M + I PSIL+ADF+RLG E+ + +
Sbjct: 1 MARAYPIIAPSILSADFTRLGAEVDAVLDS 30
>gi|312876124|ref|ZP_07736112.1| hypothetical protein CallaDRAFT_0330 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311797110|gb|EFR13451.1| hypothetical protein CallaDRAFT_0330 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 111
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ + V GG+ IK L +AGAD VGS G ++ K
Sbjct: 22 HVKIFVSGGLDPEKIKILSEAGADAFGVGSYISGAPGYLNCTK 64
>gi|205354989|ref|YP_002228790.1| hypothetical protein SG4057 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859370|ref|YP_002246021.1| hypothetical protein SEN3980 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|205274770|emb|CAR39827.1| hypothetical protein SG4057 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206711173|emb|CAR35548.1| hypothetical protein SEN3980 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326630140|gb|EGE36483.1| hypothetical protein SG9_4141 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 287
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 45/183 (24%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
EI I +AGA +H D D V H ++D++I
Sbjct: 130 ETEILEIARAGADGLHTHKSD----------------WDDLQDIVNLAHQYGLTVDAYIG 173
Query: 80 IIADAGCDIITFH-PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
D I PE + + ++ I +DMI +
Sbjct: 174 HPDDLHTFGIPARTPEEVASVAKRMQDI-------------------------GVDMIGL 208
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
MT G I I + +AL+G + +GG+ N K+ G ++LVVG
Sbjct: 209 MTGMSYEGVAAGDIPQMIK--DRLRALVGAVDVPTLAEGGINLANAKAFKDTGVNILVVG 266
Query: 198 SSF 200
++
Sbjct: 267 TAI 269
>gi|326803144|ref|YP_004320962.1| hypothetical protein HMPREF9243_0639 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650201|gb|AEA00384.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 247
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 14/93 (15%)
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTV----------NPGFG--GQQLIESTIPKIRQA 161
GV N P+ ++ + D ID +I TV N G T+ ++Q
Sbjct: 113 GVVCNAPMPIETIQAIEDRIDSPIISTVISEYDLLSKLNSGVDILNVANGRHTVELVKQV 172
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ I + GG + NIK +++AGAD +
Sbjct: 173 RDQF--PDIPIIATGGKSEENIKRVIEAGADAI 203
>gi|14589973|ref|NP_142034.1| nicotinate-nucleotide pyrophosphorylase [Pyrococcus horikoshii OT3]
gi|3256396|dbj|BAA29079.1| 283aa long hypothetical nicotinate-nucleotide pyrophosphorylase
[Pyrococcus horikoshii OT3]
Length = 283
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I + + L + + +EV GG+T NI+ + D++ +G
Sbjct: 222 IEKLRELGLRDGVKIEVSGGITPENIEEYAKLDVDVISLG 261
>gi|285017573|ref|YP_003375284.1| thiamine-phosphate pyrophosphorylase [Xanthomonas albilineans GPE
PC73]
gi|283472791|emb|CBA15296.1| probable thiamine-phosphate pyrophosphorylase protein [Xanthomonas
albilineans]
Length = 207
Score = 40.9 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+T N +++V AGADLL V S F+ +
Sbjct: 164 IGGLTPDNARAVVAAGADLLAVISGVFDADNPRAALAAYRA 204
>gi|90423666|ref|YP_532036.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
BisB18]
gi|90105680|gb|ABD87717.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
BisB18]
Length = 202
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 5/132 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H L I G G++ + + + E D I + + P
Sbjct: 74 HLHLGQEDLADADLGEIRKAGLTLGLSTHDDAELETALK--AEPDYIALGPIFPTTLKSM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ +PK+R K +G +I L GG+ + AGAD + V S +
Sbjct: 132 RFAPQGVPKLRDWKKRVG--NIPLVAIGGIKLEQADEIFAAGADSIAVVSDVTQNPDPDA 189
Query: 209 YAKRLNDLKKSA 220
+ D +A
Sbjct: 190 RVRAWLDYVAAA 201
>gi|163814853|ref|ZP_02206241.1| hypothetical protein COPEUT_01003 [Coprococcus eutactus ATCC 27759]
gi|158449792|gb|EDP26787.1| hypothetical protein COPEUT_01003 [Coprococcus eutactus ATCC 27759]
Length = 259
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ QA+ + L++ GG+ + N + + GA ++ S F GEI++ LN L+
Sbjct: 71 VNQARLALEAYPGGLQIGGGINAGNAEKFIDMGASHVIATSFVFR-DGEINF-DNLNALE 128
Query: 218 KS 219
K+
Sbjct: 129 KA 130
>gi|91204394|emb|CAJ70894.1| strongly similar to thiamin phosphate pyrophosphorylase (thiamin
phosphate synthase) [Candidatus Kuenenia
stuttgartiensis]
Length = 228
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+R + + + S+ V GG+T+ N ++QAG + + + S+ + + L DL
Sbjct: 154 LRYLQQVRQEISLPFVVIGGITANNAAEIIQAGGNRIAICSAIICSENITQATRTLKDL 212
>gi|73748592|ref|YP_307831.1| thiamine-phosphate pyrophosphorylase [Dehalococcoides sp. CBDB1]
gi|289432618|ref|YP_003462491.1| thiamine-phosphate pyrophosphorylase [Dehalococcoides sp. GT]
gi|73660308|emb|CAI82915.1| putative thiamine-phosphate pyrophosphorylase [Dehalococcoides sp.
CBDB1]
gi|288946338|gb|ADC74035.1| thiamine-phosphate pyrophosphorylase [Dehalococcoides sp. GT]
Length = 352
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
KA+ +I L GG+ N +QAGAD L + S+ L ++
Sbjct: 290 LKAIRQVVNIPLVAIGGINKSNYNEALQAGADSLCLISAVLGAPDIKKATSEFMTLVEA 348
>gi|88601944|ref|YP_502122.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanospirillum hungatei JF-1]
gi|88187406|gb|ABD40403.1| 3-hexulose-6-phosphate synthase [Methanospirillum hungatei JF-1]
Length = 429
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+I + SI + GG++ + + AGA +++VG S +R+ +
Sbjct: 156 KVIREVSIPVAAAGGISEKTAPGAIAAGASIVIVGGSIIRSSDVTGSTRRIKE 208
>gi|57640961|ref|YP_183439.1| geranylgeranylglyceryl phosphate synthase-like protein
[Thermococcus kodakarensis KOD1]
gi|116256440|sp|Q5JDY1|GGGPS_PYRKO RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|57159285|dbj|BAD85215.1| geranylgeranylglyceryl diphosphate synthase [Thermococcus
kodakarensis KOD1]
Length = 252
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GG+ T ++ V+AGAD++V G++ ++L +L +
Sbjct: 205 GGIRTEEQARAAVKAGADIIVTGTAIEKAGSVEKAREKLEELNR 248
>gi|147669352|ref|YP_001214170.1| thiamine-phosphate pyrophosphorylase [Dehalococcoides sp. BAV1]
gi|146270300|gb|ABQ17292.1| thiamine-phosphate diphosphorylase [Dehalococcoides sp. BAV1]
Length = 352
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
KA+ +I L GG+ N +QAGAD L + S+ L ++
Sbjct: 290 LKAIRQVVNIPLVAIGGINKSNYNEALQAGADSLCLISAVLGAPDIKKATSEFMTLVEA 348
>gi|322615373|gb|EFY12293.1| hypothetical protein SEEM315_09404 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618434|gb|EFY15323.1| hypothetical protein SEEM971_09668 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622155|gb|EFY19005.1| hypothetical protein SEEM973_18622 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322627225|gb|EFY24017.1| hypothetical protein SEEM974_00997 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631186|gb|EFY27950.1| hypothetical protein SEEM201_05833 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637596|gb|EFY34297.1| hypothetical protein SEEM202_03089 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642562|gb|EFY39159.1| hypothetical protein SEEM954_05771 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322643578|gb|EFY40133.1| hypothetical protein SEEM054_18867 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648314|gb|EFY44773.1| hypothetical protein SEEM675_22439 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654623|gb|EFY50943.1| hypothetical protein SEEM965_15578 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659583|gb|EFY55826.1| hypothetical protein SEEM19N_07584 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662209|gb|EFY58425.1| hypothetical protein SEEM801_16901 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666047|gb|EFY62225.1| hypothetical protein SEEM507_02419 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672466|gb|EFY68577.1| hypothetical protein SEEM877_14779 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675895|gb|EFY71966.1| hypothetical protein SEEM867_13988 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680379|gb|EFY76417.1| hypothetical protein SEEM180_11753 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684726|gb|EFY80730.1| hypothetical protein SEEM600_18362 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195990|gb|EFZ81156.1| hypothetical protein SEEM581_05514 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197080|gb|EFZ82221.1| hypothetical protein SEEM501_17269 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202216|gb|EFZ87266.1| hypothetical protein SEEM460_10372 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206316|gb|EFZ91278.1| hypothetical protein SEEM020_11785 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213328|gb|EFZ98130.1| hypothetical protein SEEM6152_13323 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215697|gb|EGA00441.1| hypothetical protein SEEM0077_08503 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222120|gb|EGA06506.1| hypothetical protein SEEM0047_17600 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226531|gb|EGA10737.1| hypothetical protein SEEM0055_01331 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229157|gb|EGA13286.1| hypothetical protein SEEM0052_05895 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236234|gb|EGA20310.1| hypothetical protein SEEM3312_18106 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237647|gb|EGA21708.1| hypothetical protein SEEM5258_20352 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323241688|gb|EGA25717.1| hypothetical protein SEEM1156_12007 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323248165|gb|EGA32102.1| hypothetical protein SEEM9199_15759 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323254504|gb|EGA38315.1| hypothetical protein SEEM8282_03545 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258435|gb|EGA42112.1| hypothetical protein SEEM8283_08926 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323259715|gb|EGA43349.1| hypothetical protein SEEM8284_10877 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265988|gb|EGA49484.1| hypothetical protein SEEM8285_07780 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270430|gb|EGA53878.1| hypothetical protein SEEM8287_19946 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 279
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 45/183 (24%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
EI I +AGA +H D D V H ++D++I
Sbjct: 122 ETEILEIARAGADGLHTHKSD----------------WDDLQDIVNLAHQYGLTVDAYIG 165
Query: 80 IIADAGCDIITFH-PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
D I PE + + ++ I +DMI +
Sbjct: 166 HPDDLHTFGIPARTPEEVASVAKRMQDI-------------------------GVDMIGL 200
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
MT G I I + +AL+G + +GG+ N K+ G ++LVVG
Sbjct: 201 MTGMSYEGVAAGDIPQMIK--DRLRALVGAVDVPTLAEGGINLANAKAFKDTGVNILVVG 258
Query: 198 SSF 200
++
Sbjct: 259 TAI 261
>gi|297616436|ref|YP_003701595.1| phosphomethylpyrimidine kinase [Syntrophothermus lipocalidus DSM
12680]
gi|297144273|gb|ADI01030.1| phosphomethylpyrimidine kinase [Syntrophothermus lipocalidus DSM
12680]
Length = 497
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 11/71 (15%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG----SSFFNQKGEI 207
+ +RQ + I++ GG+T N + ++ AGA G S+ ++
Sbjct: 433 PCGLETVRQVASFSPVPVIAI---GGITPENAREVLNAGA----AGVAVISAVWDSPDPW 485
Query: 208 SYAKRLNDLKK 218
+R ++ +
Sbjct: 486 DQMRRFIEMMR 496
>gi|78043117|ref|YP_361169.1| nicotinate-nucleotide pyrophosphorylase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995232|gb|ABB14131.1| nicotinate-nucleotide pyrophosphorylase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 283
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H +++ I +++ + E V LE + + + G L
Sbjct: 167 HIKAAGGIEEAIKRARKYAPH---TLKIEIEVESLEGLKE--------AIAAGADIVMLD 215
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ ++++A+ + G + + LE GG+ NI +AG D++ +G+
Sbjct: 216 NMSPQRVKEARKIAGDK-VLLEASGGINEENILEYARAGIDVISLGT 261
>gi|242372794|ref|ZP_04818368.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
M23864:W1]
gi|242349493|gb|EES41094.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
M23864:W1]
Length = 213
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H GK+ V + + +DE+
Sbjct: 70 DYEVSQAVKFGADVVTILGVAEDASIKAAVEEAHKHGKELLVDMIAVQDLEKRAKELDEM 129
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 130 GADYI-AVHTGYDLQAEGQSPLDSLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAEEPDL 186
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+ D
Sbjct: 187 VIVGGGIANADDPVEAAKQCRD 208
>gi|163758361|ref|ZP_02165449.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Hoeflea
phototrophica DFL-43]
gi|162284650|gb|EDQ34933.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Hoeflea
phototrophica DFL-43]
Length = 208
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I +A++ + +I V G +T + + +AGA +GSS F + L +L
Sbjct: 141 IAALRAVLPEHAIIAAV-GSITPQTLPQYHEAGARAFGLGSSLFKPDYD------LEELA 193
Query: 218 KSALA 222
+ A A
Sbjct: 194 ERAGA 198
>gi|16762899|ref|NP_458516.1| hypothetical protein STY4414 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29144386|ref|NP_807728.1| hypothetical protein t4124 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161617336|ref|YP_001591301.1| hypothetical protein SPAB_05191 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167552568|ref|ZP_02346321.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168239327|ref|ZP_02664385.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168466871|ref|ZP_02700719.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168821342|ref|ZP_02833342.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194737853|ref|YP_002117096.1| hypothetical protein SeSA_A4409 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|198245137|ref|YP_002218109.1| hypothetical protein SeD_A4608 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|204927172|ref|ZP_03218374.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|213163160|ref|ZP_03348870.1| hypothetical protein Salmoneentericaenterica_25288 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213424488|ref|ZP_03357285.1| hypothetical protein SentesTyphi_01681 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213649604|ref|ZP_03379657.1| hypothetical protein SentesTy_21255 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213855507|ref|ZP_03383747.1| hypothetical protein SentesT_16250 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289824628|ref|ZP_06544155.1| hypothetical protein Salmonellentericaenterica_05436 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25380834|pir||AI1012 hypothetical protein STY4414 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16505206|emb|CAD09202.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29140024|gb|AAO71588.1| hypothetical protein t4124 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161366700|gb|ABX70468.1| hypothetical protein SPAB_05191 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194713355|gb|ACF92576.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195630521|gb|EDX49133.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197287944|gb|EDY27332.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197939653|gb|ACH76986.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|204323837|gb|EDZ09032.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205322809|gb|EDZ10648.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205342126|gb|EDZ28890.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088625|emb|CBY98383.1| Thiamine-phosphate pyrophosphorylase TMP pyrophosphorylase;
TMP-PPase; Thiamine-phosphate synthase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|326625905|gb|EGE32250.1| Thiamine monophosphate synthase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 279
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 45/183 (24%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
EI I +AGA +H D D V H ++D++I
Sbjct: 122 ETEILEIARAGADGLHTHKSD----------------WDDLQDIVNLAHQYGLTVDAYIG 165
Query: 80 IIADAGCDIITFH-PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
D I PE + + ++ I +DMI +
Sbjct: 166 HPDDLHTFGIPARTPEEVASVAKRMQDI-------------------------GVDMIGL 200
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
MT G I I + +AL+G + +GG+ N K+ G ++LVVG
Sbjct: 201 MTGMSYEGVAAGDIPQMIK--DRLRALVGAVDVPTLAEGGINLANAKAFKDTGVNILVVG 258
Query: 198 SSF 200
++
Sbjct: 259 TAI 261
>gi|302877397|ref|YP_003845961.1| thiamine-phosphate pyrophosphorylase [Gallionella capsiferriformans
ES-2]
gi|302580186|gb|ADL54197.1| thiamine-phosphate pyrophosphorylase [Gallionella capsiferriformans
ES-2]
Length = 210
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 158 IRQAKALIGKRS---ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + L R + + GG+T N S+++AGAD L V S+ F+ A++
Sbjct: 143 VAELSLLQKARGVIALPVVAIGGITLENGASVLEAGADALAVISALFSAPDITLAARQFA 202
Query: 215 DL 216
+L
Sbjct: 203 NL 204
>gi|220933977|ref|YP_002512876.1| Nicotinate-nucleotide diphosphorylase (carboxylating)
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995287|gb|ACL71889.1| Nicotinate-nucleotide diphosphorylase (carboxylating)
[Thioalkalivibrio sp. HL-EbGR7]
Length = 285
Score = 40.9 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 105 TIHAMGKKTG--VAINPETP--------VAILEDVIDEIDMILIMTVNPGFGGQQLIEST 154
I +A ET V + + +DE+D L G L +
Sbjct: 172 LIKENHIHAAGSIAAAVETARRTAPGLMVEVETETLDEVDQAL----AAGADVIMLDDFP 227
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ ++R+A + R + LE GGV+ +K++ + G D + VGS
Sbjct: 228 LERMREAVGRVAGR-VKLEASGGVSLDTVKAIAETGVDYISVGS 270
>gi|330815498|ref|YP_004359203.1| 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate
[Burkholderia gladioli BSR3]
gi|327367891|gb|AEA59247.1| 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate
[Burkholderia gladioli BSR3]
Length = 226
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 71 ISSIDSHINIIADAGCDIITF-HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
+ + +++ ++ AG ++I H ++ +R A+G A TP +
Sbjct: 84 VLRPE-YVDEVSRAGGELIVMPHADA-----EVIRRAKALGMAA--APGVATPSEAFAAL 135
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
D +L M F +QL ++ +A+I KR + V GGVT N+ + A
Sbjct: 136 RAGAD-VLKM-----FPAEQLGPVA---VKAWRAVIDKRVPLVPV-GGVTPDNMGPYLSA 185
Query: 190 GADLLVVGSSFFNQKGEISYAKR 212
GA+ +GS+ + + + R
Sbjct: 186 GANGFGLGSALYKPGQDAATTAR 208
>gi|218888091|ref|YP_002437412.1| thiamine-phosphate pyrophosphorylase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218759045|gb|ACL09944.1| thiamine-phosphate pyrophosphorylase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 213
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ + + +A G+ +++ GG+ N S++ AGAD L V S+ A+
Sbjct: 145 PWGLDGLARLRAATGRTLVAI---GGIGPANAASVLAAGADGLAVVSALCAADDPGRAAE 201
Query: 212 RLNDLKKSALAI 223
+L+ S A+
Sbjct: 202 ---ELRGSVRAV 210
>gi|319653951|ref|ZP_08008045.1| hypothetical protein HMPREF1013_04664 [Bacillus sp. 2_A_57_CT2]
gi|317394487|gb|EFV75231.1| hypothetical protein HMPREF1013_04664 [Bacillus sp. 2_A_57_CT2]
Length = 203
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+AL I + GG+ + +++AGAD + V S K AK
Sbjct: 141 LEALKKAVEIPVMAIGGIKPEKVPEVLEAGADGIAVMSGILQAKDPAEAAK 191
>gi|213585548|ref|ZP_03367374.1| hypothetical protein SentesTyph_31492 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 125
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 133 IDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+DMI +MT G I I + +AL+G + +GG+ N K+ G
Sbjct: 41 VDMIGLMTGMSYEGVAAGDIPQMIK--DRLRALVGAVDVPTLAEGGINLANAKAFKDTGV 98
Query: 192 DLLVVGSSF 200
++LVVG++
Sbjct: 99 NILVVGTAI 107
>gi|319650908|ref|ZP_08005044.1| hexulose-6-phosphate synthase [Bacillus sp. 2_A_57_CT2]
gi|317397401|gb|EFV78103.1| hexulose-6-phosphate synthase [Bacillus sp. 2_A_57_CT2]
Length = 208
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + + GG++ + I L + AD+++VGS+ + + + +
Sbjct: 157 NDIEVAIAGGISEKTIGELKDSIADVVIVGSAITGNQAPKEASSAIKN 204
>gi|315230783|ref|YP_004071219.1| (S)-3-O-geranylgeranylglyceryl phosphate synthase [Thermococcus
barophilus MP]
gi|315183811|gb|ADT83996.1| (S)-3-O-geranylgeranylglyceryl phosphate synthase [Thermococcus
barophilus MP]
Length = 253
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
IR K++I + L V GG+ T + + + Q+GAD++V G++ KRL
Sbjct: 189 DMIRAVKSVID---VPLIVGGGIRTYEDAREVAQSGADIIVTGTAIEKAGSLEEARKRLE 245
Query: 215 DLKK 218
L K
Sbjct: 246 SLIK 249
>gi|78187561|ref|YP_375604.1| putative molybdenum utilization protein ModD [Chlorobium luteolum
DSM 273]
gi|78167463|gb|ABB24561.1| Putative molybdenum utilization protein ModD [Chlorobium luteolum
DSM 273]
Length = 285
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
E + + + I + GG+T +N G D++V+ S +F + +I+
Sbjct: 223 ECLTELVHAIRDI--APGIKISAAGGITPQNAAIYAATGIDIIVLSSVYFGKPADIAA 278
>gi|49475282|ref|YP_033323.1| thiamine-phosphate pyrophosphorylase [Bartonella henselae str.
Houston-1]
gi|49238088|emb|CAF27295.1| Thiamine-phosphate pyrophosphorylase [Bartonella henselae str.
Houston-1]
Length = 201
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
D C I E + L I + G++ + E + I V + D I + +
Sbjct: 68 DEKCHFIHLGQEDLRNAD--LPAIRKNAIRFGLSTHDEHELDIARSV--DPDYIALGPIY 123
Query: 143 PGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
P + + + KI+Q + IG + L GG+T +++AGA+
Sbjct: 124 PTILKEMKWMPQGLEKIKQWRKQIGA--LPLIGIGGLTPERAIGVLKAGAN 172
>gi|239831057|ref|ZP_04679386.1| Thiamine-phosphate pyrophosphorylase [Ochrobactrum intermedium LMG
3301]
gi|239823324|gb|EEQ94892.1| Thiamine-phosphate pyrophosphorylase [Ochrobactrum intermedium LMG
3301]
Length = 209
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
IR+ R DC L+++ + + + GCD I H L I A G K
Sbjct: 43 IRAAREIC-LAHDCQLVVND---YWKLALEEGCDFI--HLGQEDLDDADLDAIRAGGLKL 96
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISL 172
GV+ + E + V + D I + V P + + E +P+I Q KA IG I L
Sbjct: 97 GVSSHDEAELDRALSV--KPDYIALGPVYPTILKKMKWHEQGLPRIGQWKARIG--DIPL 152
Query: 173 EVDGGVTSRNIKSLVQAGADLL 194
GG++ + +AGAD++
Sbjct: 153 VGIGGMSVERAPGVFEAGADIV 174
>gi|118576459|ref|YP_876202.1| tryptophan synthase alpha chain [Cenarchaeum symbiosum A]
gi|118194980|gb|ABK77898.1| tryptophan synthase alpha chain [Cenarchaeum symbiosum A]
Length = 259
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 12/163 (7%)
Query: 52 DVIRSLRSYSDSVFDCH-----LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTI 106
+ +R R +D L + + A AG D L
Sbjct: 63 EFVRRARGETDVPLVLMTYANVLYRRGLCRFMREAASAGIDGFIIPDLPVEEAAEYLECA 122
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ--LIESTIPKIRQAKAL 164
+ +P T + ++ L + G G + E +R +
Sbjct: 123 KKEDAAAILLASPNTGPERMREIASASSGFLYVVAVYGTTGAAGGVKEYA---VRAVRRA 179
Query: 165 IGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
+ + G GV+ +++ V AGAD ++VGS+ G
Sbjct: 180 LKESGGLPVGAGFGVSGPKDVARFVDAGADAVIVGSAILKLAG 222
>gi|145218925|ref|YP_001129634.1| modD protein [Prosthecochloris vibrioformis DSM 265]
gi|145205089|gb|ABP36132.1| modD protein [Chlorobium phaeovibrioides DSM 265]
Length = 285
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
E + + + I + GG+T +N G D++V+ S +F + +I+
Sbjct: 223 ECLTELVHAIRDI--APGIKISAAGGITPQNAAIYAATGIDIIVLSSVYFGKPADIAA 278
>gi|154506041|ref|ZP_02042779.1| hypothetical protein RUMGNA_03583 [Ruminococcus gnavus ATCC 29149]
gi|153793540|gb|EDN75960.1| hypothetical protein RUMGNA_03583 [Ruminococcus gnavus ATCC 29149]
Length = 255
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDL 216
GG+T+ N + + AGA ++V S F + + S +RL ++
Sbjct: 89 GGITAENAEEYLDAGASHVIVTSYIFREGEVDRSRLRRLKEM 130
>gi|116052554|ref|YP_792869.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587775|gb|ABJ13790.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 282
Score = 40.9 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 173 HIAACGGIHRAIAEARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 221 ELSLDDMRTAVALTAGRA-KLEASGGINEGTLRNIAETGVDYISIGT 266
>gi|23822016|sp|Q8TS37|PYRF_METAC RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
Length = 221
Score = 40.9 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA D + E + D + + ++ G +IR L ++ + D +
Sbjct: 8 ILALDVTDREEALKIAEDV---WEFVDAIKVGYPLILATGLGIIRELAEFAPVIADFKVA 64
Query: 71 -ISSIDSHI-NIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETP--VAI 125
I + + I + + +AG D + + + + K V P
Sbjct: 65 DIPNTNRLICDQVFEAGADAVIAQGFTGRDSLDACIEIASEYRKDVFVVSEMSHPGGADF 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPK-IRQAKALIGKRSISLEVDGGVTSR--N 182
++ V + I M + G G + +T PK +++ + +IG + + GV ++
Sbjct: 125 MQPVAEAIAK---MALEAGAFG-LVAPATRPKRVKKIRRIIGDKLTIISP--GVGAQGGK 178
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
++ AGAD ++VG S + + A+++ + ++ L
Sbjct: 179 ASDVIAAGADWVIVGRSIYKAESPKEAARQIAEEIQAEL 217
>gi|312128028|ref|YP_003992902.1| quinolinate phosphoribosyl transferase [Caldicellulosiruptor
hydrothermalis 108]
gi|311778047|gb|ADQ07533.1| Quinolinate phosphoribosyl transferase [Caldicellulosiruptor
hydrothermalis 108]
Length = 343
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ ++R+ L G + + V GG+ IK L +AGAD VGS
Sbjct: 256 PELVYEVRKRLDLEGFEHVKIFVSGGLDPEKIKILSEAGADAFGVGSYI 304
>gi|167626285|ref|YP_001676785.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|226700324|sp|B0TY42|HIS4_FRAP2 RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|167596286|gb|ABZ86284.1| 1-(5-phosphoribosyl)-5-((5-
phosphoribosylamino)methylideneamino)imidazole-4-
carboxamideisomerase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 241
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS-RNIKSLVQAGADLL 194
I ++ ++ GQ TI KIR+ + +L+V GGV I+ L++ G D +
Sbjct: 47 IHVVDLDGAKKGQTCQFETIQKIRENCNM------TLQVGGGVKDFETIEKLLEIGVDRV 100
Query: 195 VVGS 198
V+GS
Sbjct: 101 VIGS 104
>gi|21283743|ref|NP_646831.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus MW2]
gi|49486884|ref|YP_044105.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|297210089|ref|ZP_06926482.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300910452|ref|ZP_07127904.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus TCH70]
gi|24212475|sp|Q8NVH5|THIE_STAAW RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|56749701|sp|Q6G7L9|THIE_STAAS RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|21205185|dbj|BAB95879.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
MW2]
gi|49245327|emb|CAG43802.1| putative thiamine-phosphate pyrophosphorylase [Staphylococcus
aureus subsp. aureus MSSA476]
gi|296885289|gb|EFH24229.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300888294|gb|EFK83485.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus TCH70]
Length = 213
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I I K + + + + GG+ + N+ +V+AGA+ + V S+ + +
Sbjct: 147 IPVGPEMIATFKEMNPQ--LPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIENTV 204
Query: 211 KRLNDL 216
R D
Sbjct: 205 NRFKDF 210
>gi|82750275|ref|YP_416016.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus RF122]
gi|119370767|sp|Q2YS94|HPS_STAAB RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|82655806|emb|CAI80208.1| probable 3-hexulose-6-phosphate synthase [Staphylococcus aureus
RF122]
Length = 210
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKTAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKEIVAESPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 VIVGGGIANADDPVEAAKQCRA 205
>gi|332711970|ref|ZP_08431900.1| nicotinate-nucleotide pyrophosphorylase [Lyngbya majuscula 3L]
gi|332349298|gb|EGJ28908.1| nicotinate-nucleotide pyrophosphorylase [Lyngbya majuscula 3L]
Length = 285
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H +++ I ++ I T +A +E+ I I+++ P +
Sbjct: 172 HIQAAGGIGEAIARIRKTIPYPMTIEVETTTLAEVEEAIAHNADIIMLDNMP-------V 224
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
E ++ + + +I +E G VT + I+++ + G D +
Sbjct: 225 EQMEVAVKLIR--VRNNNIKIEASGNVTLKTIRAVAETGVDYI 265
>gi|91773634|ref|YP_566326.1| nicotinate-nucleotide pyrophosphorylase [carboxylating]
[Methanococcoides burtonii DSM 6242]
gi|91712649|gb|ABE52576.1| Nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Methanococcoides burtonii DSM 6242]
Length = 274
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDE----IDMILIMTVNPGFGGQQLIESTIPKIR 159
I++ + G + V +E+ I +D+I+ ++PG I +
Sbjct: 169 NAINSAKELAGFTQKIDVEVESVENAILAAKMGVDIIMFDNMSPG--------QVIKVVE 220
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
K + S LEV GG+ NI + G D++ VGS +
Sbjct: 221 ALKNEDLRNSAILEVSGGIDISNISEYAKTGVDVISVGSLVHKSQ 265
>gi|225448213|ref|XP_002265950.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 620
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV 141
CD H S R +RT+ K GV+ TP + ID D I V
Sbjct: 479 VALACDADGVHVGQSDIPARVVRTLLGPEKIIGVSCK--TPEQAEKAWIDGADYIGCGGV 536
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA----DLLVVG 197
P I + K + + + GG+ + N +++++ G + VV
Sbjct: 537 YPTNTKANNITVGLD---GLKTVCLASKLPVVAIGGINASNARTVMEIGVPNLKGVAVV- 592
Query: 198 SSFFNQKGEISYAKRLN-DLKKSALAI 223
S+ F+++ ++ ++L+ DL ++A +
Sbjct: 593 SALFDRECVLTETQKLHGDLTQAAAMV 619
>gi|291486422|dbj|BAI87497.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
natto BEST195]
Length = 222
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
SI + GG+T N ++QAGAD + + S+ + S A++ +
Sbjct: 167 SIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 213
>gi|83590985|ref|YP_430994.1| thiamine-phosphate pyrophosphorylase [Moorella thermoacetica ATCC
39073]
gi|123523944|sp|Q2RGI8|THIE_MOOTA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|83573899|gb|ABC20451.1| thiamine-phosphate diphosphorylase [Moorella thermoacetica ATCC
39073]
Length = 210
Score = 40.5 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G G + +R +A + I + GG+ N ++ AGAD +
Sbjct: 134 GSKGDAGSPIGLEGLRAIRAAVK---IPIVGIGGINPDNAAGVIAAGADGV 181
>gi|291538153|emb|CBL11264.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase, eukaryotic type [Roseburia intestinalis
XB6B4]
Length = 259
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY--AKRLND 215
QA+ + L++ GGVT+ N K + AGA ++V S F G+I+Y KRLN
Sbjct: 72 EQAEHALRAYPGGLQIGGGVTAENAKEFLDAGASHVIVTSYVFR-DGKINYDNLKRLNA 129
>gi|291535342|emb|CBL08454.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase, eukaryotic type [Roseburia intestinalis
M50/1]
Length = 259
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY--AKRLND 215
QA+ + L++ GGVT+ N K + AGA ++V S F G+I+Y KRLN
Sbjct: 72 EQAEHALRAYPGGLQIGGGVTAENAKEFLDAGASHVIVTSYVFR-DGKINYDNLKRLNA 129
>gi|241668724|ref|ZP_04756302.1| 1-(5-phosphoribosyl)-5-((5-
phosphoribosylamino)methylideneamino)imidazole-4-
[Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254877256|ref|ZP_05249966.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843277|gb|EET21691.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 241
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS-RNIKSLVQAGADLL 194
I ++ ++ GQ TI KIR+ + +L+V GGV I+ L++ G D +
Sbjct: 47 IHVVDLDGAKKGQTCQFETIQKIRENCNM------TLQVGGGVKDFETIEKLLEIGVDRV 100
Query: 195 VVGS 198
V+GS
Sbjct: 101 VIGS 104
>gi|225871814|ref|YP_002753268.1| thiamine-phosphate diphosphorylase [Acidobacterium capsulatum ATCC
51196]
gi|225791366|gb|ACO31456.1| thiamine-phosphate diphosphorylase [Acidobacterium capsulatum ATCC
51196]
Length = 250
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFN 202
+ +R A+ K +++ GG+T + ++++AGAD + V+ S+ F
Sbjct: 178 LEGVRTARQRTQKPLVAI---GGITPQTALAVMEAGADSVAVI-SAIFG 222
>gi|329766181|ref|ZP_08257740.1| geranylgeranylglyceryl phosphate synthase-like protein [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137452|gb|EGG41729.1| geranylgeranylglyceryl phosphate synthase-like protein [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 250
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
T ++ + + GG+ + SLV+AGAD LV+G+ F +KG K+
Sbjct: 186 TPEMVKTVRKAF--NGFLIVG-GGIRDVKTATSLVKAGADALVIGT--FLEKGGS--IKK 238
Query: 213 LNDLKKS 219
L ++ K+
Sbjct: 239 LEEIAKA 245
>gi|257459040|ref|ZP_05624159.1| ModD protein [Campylobacter gracilis RM3268]
gi|257443425|gb|EEV18549.1| ModD protein [Campylobacter gracilis RM3268]
Length = 283
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 158 IRQAKALIGKRS-----ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + +A + KR I + GG+ N GAD+LV S+ +NQ
Sbjct: 222 LSELRACVLKRDETAPQIKICAAGGINKNNCAEFAATGADVLVS-SAVWNQ 271
>gi|315301307|ref|ZP_07872520.1| thiamine-phosphate pyrophosphorylase [Listeria ivanovii FSL F6-596]
gi|313630325|gb|EFR98245.1| thiamine-phosphate pyrophosphorylase [Listeria ivanovii FSL F6-596]
Length = 214
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I + GG+ N ++ AGAD + V S+ + + L +L+ +
Sbjct: 164 IPIVGIGGINEANCAEVLVAGADGVSVISAITRSDNCQATIQNLKNLRSA 213
>gi|322435501|ref|YP_004217713.1| thiamine monophosphate synthase [Acidobacterium sp. MP5ACTX9]
gi|321163228|gb|ADW68933.1| thiamine monophosphate synthase [Acidobacterium sp. MP5ACTX9]
Length = 234
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ +R+A+AL GK +++ GG+T N +S+V AGAD++ V + F
Sbjct: 161 LEGVRRARALTGKPLVAI---GGITLANARSVVDAGADMVAVITGLF 204
>gi|157736734|ref|YP_001489417.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Arcobacter butzleri
RM4018]
gi|315635909|ref|ZP_07891171.1| 1-(5-phosphoribosyl)-5 [Arcobacter butzleri JV22]
gi|167011504|sp|A8ES24|HIS4_ARCB4 RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|157698588|gb|ABV66748.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Arcobacter butzleri RM4018]
gi|315479888|gb|EFU70559.1| 1-(5-phosphoribosyl)-5 [Arcobacter butzleri JV22]
Length = 235
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADL 193
+ I+ +N F G+ + + +I++ + ++ +E+ GG+ IK ++ G D
Sbjct: 46 WVHIVDLNGAFAGK---PANLEQIKKIRENC---NLKIELGGGIRDEETIKMYLELGVDR 99
Query: 194 LVVGS 198
L++GS
Sbjct: 100 LILGS 104
>gi|323499588|ref|ZP_08104557.1| thiamine-phosphate pyrophosphorylase [Vibrio sinaloensis DSM 21326]
gi|323315328|gb|EGA68370.1| thiamine-phosphate pyrophosphorylase [Vibrio sinaloensis DSM 21326]
Length = 204
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
S+ + GG+ NI L G L + S+ + S A+ L L
Sbjct: 155 SLPIVAIGGINQDNIPQLCATGVQGLALVSAICHADDPKSAARYLRQLMN 204
>gi|295704244|ref|YP_003597319.1| thiamine-phosphate pyrophosphorylase [Bacillus megaterium DSM 319]
gi|294801903|gb|ADF38969.1| thiamine-phosphate pyrophosphorylase [Bacillus megaterium DSM 319]
Length = 214
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + + + GG+T N K +V+AGAD + + ++ A +L +
Sbjct: 155 IEEVRNQNI--DFPIVGIGGITPENAKQVVEAGADGVSIITAISLAASPKEKAAQLKE 210
>gi|7676165|sp|O27697|TRPA_METTH RecName: Full=Tryptophan synthase alpha chain
Length = 270
Score = 40.5 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 88/239 (36%), Gaps = 45/239 (18%)
Query: 21 EEISNITKAGAKQIHF-----D-VMDGCFVPNISF-----------GADVIRSLRSYSDS 63
E I + AGA + D + DG V +I +R ++
Sbjct: 37 EIIRTLVDAGADALEVGFPFSDPIADGTSVQGADLRALRAGMTTEKCFQLIERVREFTSI 96
Query: 64 VFD-------CHLMISSIDSHINIIADAGCDIIT---FHPESSPHIRRSLRTIHAMGKKT 113
+ M +D A+AG I PE + R+ + + +
Sbjct: 97 PIGLLVYYNLIYRMG--VDEFYRRAAEAGVTGILAADLPPEEASDALRAAEK-YDIDQIF 153
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI--ESTIPKIRQAKALIGKRSIS 171
VA P T L+ + + + G G + ++TI I++ KA + S+
Sbjct: 154 IVA--PTTGSERLKRISEVSSGFHYLVSVMGVTGARSRVEDATIELIKRVKA---EGSLP 208
Query: 172 LEVDG-GVT-SRNIKSLVQAGADLLVVGSSFF-----NQKGEISYAKRLNDLKKSALAI 223
+ V G GV+ +++ L AGAD ++VGS+ N +R++++ + A
Sbjct: 209 VMV-GFGVSRPEHVRMLRDAGADGVIVGSAIIDVISGNLGDRELMLQRIHEMAGTLKAA 266
>gi|312792855|ref|YP_004025778.1| quinolinate phosphoribosyl transferase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179995|gb|ADQ40165.1| Quinolinate phosphoribosyl transferase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 343
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ ++R+ L G + + V GG+ IK L +AGAD VGS + I
Sbjct: 256 PELVYEVRKRLDLEGFDHVKIFVSGGLDPEKIKILSEAGADAFGVGSYI-SGAPPIDMTM 314
Query: 212 RLND 215
+ +
Sbjct: 315 DIKE 318
>gi|300863830|ref|ZP_07108755.1| nicotinate-nucleotide pyrophosphorylase [Oscillatoria sp. PCC 6506]
gi|300338178|emb|CBN53901.1| nicotinate-nucleotide pyrophosphorylase [Oscillatoria sp. PCC 6506]
Length = 290
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 15/106 (14%)
Query: 92 HPESSPHIRRSLRTIHAMGKKT-GVAINPETPVAILEDVIDEIDMILI--MTVNPGFGGQ 148
H ++ I ++ I A V + ET + + E D+I++ M+V+
Sbjct: 176 HIAAAGGIGEAIDRIRATIPYPLTVEVETETLAEVETALKHEADIIMLDNMSVD------ 229
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L+ + +RQ I +E G +T I+S+ + G D +
Sbjct: 230 -LMRQAVELVRQ-----HSNRIKIEASGNITLETIRSVAETGVDYI 269
>gi|294498922|ref|YP_003562622.1| thiamine-phosphate pyrophosphorylase [Bacillus megaterium QM B1551]
gi|294348859|gb|ADE69188.1| thiamine-phosphate pyrophosphorylase [Bacillus megaterium QM B1551]
Length = 214
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + + + GG+T N K +V+AGAD + + ++ A +L +
Sbjct: 155 IEEVRNQNI--DFPIVGIGGITPENAKQVVEAGADGVSIITAISLAASPKEKAAQLKE 210
>gi|229592779|ref|YP_002874898.1| thiamine-phosphate pyrophosphorylase [Pseudomonas fluorescens
SBW25]
gi|259518443|sp|C3K2K2|THIE_PSEFS RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|229364645|emb|CAY52565.1| putative thiamine biosynthesis-related protein [Pseudomonas
fluorescens SBW25]
Length = 209
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAK 211
T+ + QA+A + + + V GG+T N + LV GADLL V G F +
Sbjct: 142 TVEMLAQARARVQ---LPICVIGGITLENAEPLVAHGADLLAVVHG--LFGADSTQEVTR 196
Query: 212 RLNDL 216
R
Sbjct: 197 RARAF 201
>gi|254415953|ref|ZP_05029710.1| thiazole biosynthesis protein ThiG, putative [Microcoleus
chthonoplastes PCC 7420]
gi|196177380|gb|EDX72387.1| thiazole biosynthesis protein ThiG, putative [Microcoleus
chthonoplastes PCC 7420]
Length = 647
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 114 GVAINPETPVAI-LEDVIDEIDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSIS 171
G A+ P L ++E+ + +M + G GQ + + +I +I + I
Sbjct: 517 GFAVLPYINADPMLAKRLEEVGCVTVMPLGSPIGSGQGIKTAANIQI-----IIEEAGIP 571
Query: 172 LEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ VD G+ + ++ GAD ++V S+ K ++ K +
Sbjct: 572 VVVDAGIGSPSEAAQAMEMGADAILVNSAIALAKNPVAMGKAM 614
>gi|242310144|ref|ZP_04809299.1| LOW QUALITY PROTEIN: phosphoribosylformimino-5-aminoimidazole
carboxamide ribonucleotide [Helicobacter pullorum MIT
98-5489]
gi|239523441|gb|EEQ63307.1| LOW QUALITY PROTEIN: phosphoribosylformimino-5-aminoimidazole
carboxamide ribonucleotide [Helicobacter pullorum MIT
98-5489]
Length = 147
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ + I+ ++ F G+ I KI + + +EV GG+ + I+ ++ G +
Sbjct: 44 EYLHIVDLDGAFRGEPKNREVIEKIAK------HSKLKIEVGGGIRDEKTIQEYLEIGVN 97
Query: 193 LLVVGSSFFNQKGEISYAKRLND 215
+++GS +AK +
Sbjct: 98 RVILGSIALKNPD---FAKEMAQ 117
>gi|16080880|ref|NP_391708.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221311795|ref|ZP_03593642.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316121|ref|ZP_03597926.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321032|ref|ZP_03602326.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325317|ref|ZP_03606611.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321313387|ref|YP_004205674.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis BSn5]
gi|732341|sp|P39594|THIE_BACSU RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|413950|emb|CAA51582.1| ipa-26d [Bacillus subtilis subsp. subtilis str. 168]
gi|2636364|emb|CAB15855.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|320019661|gb|ADV94647.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis BSn5]
Length = 222
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
SI + GG+T N ++QAGAD + + S+ + S A++ +
Sbjct: 167 SIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 213
>gi|134298464|ref|YP_001111960.1| thiamine-phosphate pyrophosphorylase [Desulfotomaculum reducens
MI-1]
gi|134051164|gb|ABO49135.1| thiamine-phosphate diphosphorylase [Desulfotomaculum reducens MI-1]
Length = 206
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I IRQ K K L GG++ N +V +GAD L + S+ K
Sbjct: 143 PLGIEVIRQLKGDFPK--AKLVAIGGISLDNASEVVNSGADGLAIISAILGASEPGERVK 200
Query: 212 RLNDL 216
+ +
Sbjct: 201 QFLKM 205
>gi|156937219|ref|YP_001435015.1| geranylgeranylglyceryl phosphate synthase-like protein [Ignicoccus
hospitalis KIN4/I]
gi|206557755|sp|A8A9K6|GGGPS_IGNH4 RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|156566203|gb|ABU81608.1| geranylgeranylglyceryl phosphate synthase [Ignicoccus hospitalis
KIN4/I]
Length = 245
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN-IKSLVQAGADLLVV 196
++ + G G ++ + +R AK L+G+ I + GG+ +++AGAD +VV
Sbjct: 167 VVYLEAGSGVKRSVPP--EAVRLAKKLLGEEVILIVG-GGIKDEEVAAEILRAGADGVVV 223
Query: 197 GSSFFNQKGEISYAKRL 213
G+ + ++S A+R+
Sbjct: 224 GTVV---ERDLSAAERI 237
>gi|317497722|ref|ZP_07956037.1| 3-hexulose-6-phosphate synthase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895056|gb|EFV17223.1| 3-hexulose-6-phosphate synthase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 209
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 78 INIIADAGCDIITF-HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
AG D T + I ++ GK+T V + V I+ + +
Sbjct: 70 AEETFKAGADYCTVLGVTDTLTIEGCVKAAKEYGKQTMVDMICVEDVPKRVKEIEAVG-V 128
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
+ V+ G Q + + + K+ + K+ + + SI + V GG+ + I+ + ++++V
Sbjct: 129 DFIGVHVGVDQQAVGITPLEKLAEMKSCV-EHSI-VSVAGGINLKTIEEYKKLNPEVIIV 186
Query: 197 GSSFFNQKGEISYAKRL 213
G + + ++ AK +
Sbjct: 187 GGGINHAEDPVAAAKAI 203
>gi|240850175|ref|YP_002971568.1| thiamine-phosphate pyrophosphorylase ThiE1 [Bartonella grahamii
as4aup]
gi|240267298|gb|ACS50886.1| thiamine-phosphate pyrophosphorylase ThiE1 [Bartonella grahamii
as4aup]
Length = 201
Score = 40.5 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 27/128 (21%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
H I D C+ I E + L I G K G++ + E E+D+
Sbjct: 61 DHWEIAIDEKCNFIHLGQEDLSNAD--LHAIRKSGIKVGLSTHDE----------HELDI 108
Query: 136 ILIMTVNPGF-----------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIK 184
L +VNP + + + + KI+Q + IG + L GG+T
Sbjct: 109 AL--SVNPEYIALGPIYPTILKKMKWMPQGLEKIKQWRKRIGA--LPLVGIGGLTPERAV 164
Query: 185 SLVQAGAD 192
+++AGA+
Sbjct: 165 GVLKAGAN 172
>gi|312963215|ref|ZP_07777699.1| Thiamine-phosphate pyrophosphorylase [Pseudomonas fluorescens WH6]
gi|311282481|gb|EFQ61078.1| Thiamine-phosphate pyrophosphorylase [Pseudomonas fluorescens WH6]
Length = 209
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAK 211
T+ + QA+ + + + V GGVT N + LV GADLL V G F +
Sbjct: 142 TVDMLAQARQRL---HLPICVIGGVTLENAEPLVAHGADLLAVVHG--LFGADSTQEVTR 196
Query: 212 RLNDL 216
R
Sbjct: 197 RARAF 201
>gi|166031019|ref|ZP_02233848.1| hypothetical protein DORFOR_00700 [Dorea formicigenerans ATCC
27755]
gi|166029286|gb|EDR48043.1| hypothetical protein DORFOR_00700 [Dorea formicigenerans ATCC
27755]
Length = 267
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L+V GG+ + N + ++AGA ++V S F G+I++ + + LK +
Sbjct: 97 LQVGGGIHAENAEEFLEAGASHVIVTSYVFR-DGKINW-ENMEKLKHA 142
>gi|332978188|gb|EGK14920.1| thiamine-phosphate diphosphorylase [Desmospora sp. 8437]
Length = 236
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IRQ + S+ + GG+ N K+++QAGA+ + V S+ A L +
Sbjct: 168 IRQIARM-DNSSLPIVGIGGIHHHNAKAVIQAGAEGIAVISAIAGASSPRQAAAELRE 224
>gi|320160888|ref|YP_004174112.1| putative glyceraldehyde-3-phosphate: ferredoxin oxidoreductase
[Anaerolinea thermophila UNI-1]
gi|319994741|dbj|BAJ63512.1| putative glyceraldehyde-3-phosphate: ferredoxin oxidoreductase
[Anaerolinea thermophila UNI-1]
Length = 677
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 21/123 (17%)
Query: 76 SHINIIADAGCDIITFHPES----SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+ I D +IIT H + + H + IH + V E + ++ ++
Sbjct: 553 KWVEAIVD---EIITAHYDLGIDYTKHQFNLCKDIHDHESPSVVFWESERNIDLIWKFLE 609
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+ + +N L K R A+ + I+ +AGA
Sbjct: 610 DWK---LRGLNDASLEDWLNRFQQDKYRAARQFWDE-----------IREGIEEAFEAGA 655
Query: 192 DLL 194
D +
Sbjct: 656 DSI 658
>gi|312136510|ref|YP_004003847.1| geranylgeranylglyceryl diphosphate synthase [Methanothermus
fervidus DSM 2088]
gi|311224229|gb|ADP77085.1| geranylgeranylglyceryl diphosphate synthase [Methanothermus
fervidus DSM 2088]
Length = 249
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
I K+R ++ + V GG+ T +++ +++AGAD++V G+
Sbjct: 184 MISKVR------DSTNLKIIVGGGIKTREDVERVIKAGADIIVTGTIIERASDIKKKISE 237
Query: 213 LNDLKKSALAID 224
+ + KS +D
Sbjct: 238 IVEPLKSTSNVD 249
>gi|303249028|ref|ZP_07335272.1| modD protein [Desulfovibrio fructosovorans JJ]
gi|302489551|gb|EFL49492.1| modD protein [Desulfovibrio fructosovorans JJ]
Length = 283
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
I I + +A+ +I + GGV N GAD+LV+ SS F K
Sbjct: 225 IELIGKVRAI--NPTILIAAAGGVNEANTAEYAATGADILVL-SSVFFGK 271
>gi|224418717|ref|ZP_03656723.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Helicobacter
canadensis MIT 98-5491]
gi|253826753|ref|ZP_04869638.1| Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Helicobacter canadensis MIT 98-5491]
gi|313142236|ref|ZP_07804429.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
[Helicobacter canadensis MIT 98-5491]
gi|253510159|gb|EES88818.1| Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Helicobacter canadensis MIT 98-5491]
gi|313131267|gb|EFR48884.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
[Helicobacter canadensis MIT 98-5491]
Length = 235
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
+R I + + VA + + + + + I+ ++ F G+ ++ I I Q
Sbjct: 15 VRLIQGKMESAKIYYKNPLEVAKIFEEMG-AEYLHIVDLDGAFCGKPQNKAVIENIAQ-- 71
Query: 163 ALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKG 205
++ +E+ GG+ IK + GA+ +++GS
Sbjct: 72 ----NSTLKIEIGGGIRNEETIKEYLNLGANRIILGSIALKDPN 111
>gi|15988168|pdb|1G67|A Chain A, Thiamin Phosphate Synthase
gi|15988169|pdb|1G67|B Chain B, Thiamin Phosphate Synthase
Length = 225
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
SI + GG+T N ++QAGAD + + S+ + S A++ +
Sbjct: 170 SIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 216
>gi|219871917|ref|YP_002476292.1| thiamine-phosphate pyrophosphorylase [Haemophilus parasuis SH0165]
gi|219692121|gb|ACL33344.1| thiamine-phosphate pyrophosphorylase [Haemophilus parasuis SH0165]
Length = 220
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I IRQAK L + + GG++ N+ S+ AGAD + V S+ + ++L
Sbjct: 160 IDLIRQAKQLNPNQPL--VAIGGISVDNVASIWAAGADGVAVISAITQADNVMQTVQKLK 217
>gi|167571280|ref|ZP_02364154.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
oklahomensis C6786]
Length = 209
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR+ + +++ + AG ++I P + + R +T+
Sbjct: 49 IAALRAALPADAIVGAGTVLRAEYVDEVVRAGGELIVM-PHADGDVVRRAKTL------- 100
Query: 114 GVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+A P TP + + D +L M F +QL +S ++ +A+I R
Sbjct: 101 GIACAPGVATPTEAFAALANGAD-VLKM-----FPAEQLGQSA---VKAWRAVIDARVPL 151
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ V GG+T N+ + AGA+ +GS+ +
Sbjct: 152 VPV-GGITPENMGPYLAAGANGFGLGSALY 180
>gi|167564134|ref|ZP_02357050.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
oklahomensis EO147]
Length = 229
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR+ + +++ + AG ++I P + + R +T+
Sbjct: 69 IAALRAALPADAIVGAGTVLRAEYVDEVVRAGGELIVM-PHADGDVVRRAKTL------- 120
Query: 114 GVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+A P TP + + D +L M F +QL +S ++ +A+I R
Sbjct: 121 GIACAPGVATPTEAFAALANGAD-VLKM-----FPAEQLGQSA---VKAWRAVIDARVPL 171
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ V GG+T N+ + AGA+ +GS+ +
Sbjct: 172 VPV-GGITPENMGPYLAAGANGFGLGSALY 200
>gi|56476378|ref|YP_157967.1| thiamine-phosphate pyrophosphorylase [Aromatoleum aromaticum EbN1]
gi|81821179|sp|Q5P6J5|THIE_AZOSE RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|56312421|emb|CAI07066.1| Thiamine-phosphate pyrophosphorylase [Aromatoleum aromaticum EbN1]
Length = 208
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 165 IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + L GG+T N ++ AGA LL V S F+ + A L
Sbjct: 154 RRELDVPLAAIGGITLDNAAQVIAAGASLLAVVSDVFDAPDPGARAAAYRTL 205
>gi|27381769|ref|NP_773298.1| thiamine-phosphate pyrophosphorylase [Bradyrhizobium japonicum USDA
110]
gi|27354938|dbj|BAC51923.1| thiamine-phosphate pyrophosphorylase [Bradyrhizobium japonicum USDA
110]
Length = 208
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 11/135 (8%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF---- 145
H L+ I G GV+ + + +A + + D + + P F
Sbjct: 80 YLHLGQEDLADADLKAIREAGLSLGVSTHDDAELAT--ALAAKPDYV---ALGPIFFTTL 134
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
+ IPKI + K IG +I L GG+ + + AGAD + V S
Sbjct: 135 KSMRFEPQGIPKITEWKKRIG--TIPLVAIGGIKFEHAAEIFAAGADSIAVVSDVTQNTD 192
Query: 206 EISYAKRLNDLKKSA 220
+ ++ L A
Sbjct: 193 PDARVRQWLGLPAEA 207
>gi|213615776|ref|ZP_03371602.1| hypothetical protein SentesTyp_15404 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 228
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 45/183 (24%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
EI I +AGA +H D D V H ++D++I
Sbjct: 71 ETEILEIARAGADGLHTHKSD----------------WDDLQDIVNLAHQYGLTVDAYIG 114
Query: 80 IIADAGCDIITFH-PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
D I PE + + ++ I +DMI +
Sbjct: 115 HPDDLHTFGIPARTPEEVASVAKRMQDI-------------------------GVDMIGL 149
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
MT G I I + +AL+G + +GG+ N K+ G ++LVVG
Sbjct: 150 MTGMSYEGVAAGDIPQMIK--DRLRALVGAVDVPTLAEGGINLANAKAFKDTGVNILVVG 207
Query: 198 SSF 200
++
Sbjct: 208 TAI 210
>gi|4699824|pdb|2TPS|A Chain A, Thiamin Phosphate Synthase
gi|4699825|pdb|2TPS|B Chain B, Thiamin Phosphate Synthase
gi|15988166|pdb|1G4T|A Chain A, Thiamin Phosphate Synthase
gi|15988167|pdb|1G4T|B Chain B, Thiamin Phosphate Synthase
Length = 227
Score = 40.5 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
SI + GG+T N ++QAGAD + + S+ + S A++ +
Sbjct: 172 SIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218
>gi|269202193|ref|YP_003281462.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus ED98]
gi|262074483|gb|ACY10456.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus ED98]
Length = 210
Score = 40.5 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAESPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 VIVGGGIANADDPVEAAKQCRA 205
>gi|15988162|pdb|1G4P|A Chain A, Thiamin Phosphate Synthase
gi|15988163|pdb|1G4P|B Chain B, Thiamin Phosphate Synthase
gi|15988164|pdb|1G4S|A Chain A, Thiamin Phosphate Synthase
gi|15988165|pdb|1G4S|B Chain B, Thiamin Phosphate Synthase
Length = 226
Score = 40.5 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
SI + GG+T N ++QAGAD + + S+ + S A++ +
Sbjct: 171 SIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 217
>gi|15988160|pdb|1G4E|A Chain A, Thiamin Phosphate Synthase
gi|15988161|pdb|1G4E|B Chain B, Thiamin Phosphate Synthase
gi|15988172|pdb|1G6C|A Chain A, Thiamin Phosphate Synthase
gi|15988173|pdb|1G6C|B Chain B, Thiamin Phosphate Synthase
Length = 227
Score = 40.5 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
SI + GG+T N ++QAGAD + + S+ + S A++ +
Sbjct: 172 SIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218
>gi|15923560|ref|NP_371094.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926248|ref|NP_373781.1| hypothetical protein SA0528 [Staphylococcus aureus subsp. aureus
N315]
gi|57651446|ref|YP_185502.1| hexulose-6-phosphate synthase, putative [Staphylococcus aureus
subsp. aureus COL]
gi|88194332|ref|YP_499125.1| hypothetical protein SAOUHSC_00553 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267030|ref|YP_001245973.1| orotidine 5'-phosphate decarboxylase [Staphylococcus aureus subsp.
aureus JH9]
gi|150393077|ref|YP_001315752.1| orotidine 5'-phosphate decarboxylase [Staphylococcus aureus subsp.
aureus JH1]
gi|151220745|ref|YP_001331567.1| hypothetical protein NWMN_0533 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156978899|ref|YP_001441158.1| hypothetical protein SAHV_0568 [Staphylococcus aureus subsp. aureus
Mu3]
gi|221141861|ref|ZP_03566354.1| hypothetical protein SauraJ_09560 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316796|ref|ZP_04840009.1| hypothetical protein SauraC_11745 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255005364|ref|ZP_05143965.2| hypothetical protein SauraM_02815 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793152|ref|ZP_05642131.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9781]
gi|258407636|ref|ZP_05680771.1| orotidine 5'-phosphate decarboxylase [Staphylococcus aureus A9763]
gi|258420324|ref|ZP_05683269.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9719]
gi|258437728|ref|ZP_05689433.1| orotidine 5'-phosphate decarboxylase [Staphylococcus aureus A9299]
gi|258442321|ref|ZP_05691084.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A8115]
gi|258446309|ref|ZP_05694467.1| hexulose-6-phosphate synthase [Staphylococcus aureus A6300]
gi|258450032|ref|ZP_05698129.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A6224]
gi|258450977|ref|ZP_05699029.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A5948]
gi|258455071|ref|ZP_05703033.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A5937]
gi|262049665|ref|ZP_06022532.1| hypothetical protein SAD30_1126 [Staphylococcus aureus D30]
gi|262051907|ref|ZP_06024121.1| hypothetical protein SA930_1246 [Staphylococcus aureus 930918-3]
gi|282895008|ref|ZP_06303230.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A8117]
gi|282925412|ref|ZP_06333067.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9765]
gi|282928705|ref|ZP_06336300.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A10102]
gi|284023584|ref|ZP_06377982.1| hypothetical protein Saura13_03302 [Staphylococcus aureus subsp.
aureus 132]
gi|295406947|ref|ZP_06816750.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A8819]
gi|296275486|ref|ZP_06857993.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus MR1]
gi|297246108|ref|ZP_06929963.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A8796]
gi|304381830|ref|ZP_07364477.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|81695133|sp|Q5HIA5|HPS_STAAC RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|81706157|sp|Q7A774|HPS_STAAN RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|81782064|sp|Q99W39|HPS_STAAM RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|119370766|sp|Q2G0K7|HPS_STAA8 RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|13700462|dbj|BAB41759.1| SA0528 [Staphylococcus aureus subsp. aureus N315]
gi|14246338|dbj|BAB56732.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus Mu50]
gi|57285632|gb|AAW37726.1| hexulose-6-phosphate synthase, putative [Staphylococcus aureus
subsp. aureus COL]
gi|87201890|gb|ABD29700.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740099|gb|ABQ48397.1| hexulose-6-phosphate synthase [Staphylococcus aureus subsp. aureus
JH9]
gi|149945529|gb|ABR51465.1| Orotidine 5'-phosphate decarboxylase [Staphylococcus aureus subsp.
aureus JH1]
gi|150373545|dbj|BAF66805.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721034|dbj|BAF77451.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|257787124|gb|EEV25464.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9781]
gi|257840716|gb|EEV65174.1| orotidine 5'-phosphate decarboxylase [Staphylococcus aureus A9763]
gi|257843638|gb|EEV68042.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9719]
gi|257848516|gb|EEV72505.1| orotidine 5'-phosphate decarboxylase [Staphylococcus aureus A9299]
gi|257852050|gb|EEV75982.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A8115]
gi|257854903|gb|EEV77848.1| hexulose-6-phosphate synthase [Staphylococcus aureus A6300]
gi|257856651|gb|EEV79555.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A6224]
gi|257861397|gb|EEV84206.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A5948]
gi|257862711|gb|EEV85477.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A5937]
gi|259160164|gb|EEW45194.1| hypothetical protein SA930_1246 [Staphylococcus aureus 930918-3]
gi|259162208|gb|EEW46783.1| hypothetical protein SAD30_1126 [Staphylococcus aureus D30]
gi|282589588|gb|EFB94675.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A10102]
gi|282592506|gb|EFB97517.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9765]
gi|282762591|gb|EFC02729.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A8117]
gi|285816271|gb|ADC36758.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
aureus 04-02981]
gi|294968178|gb|EFG44204.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A8819]
gi|297176954|gb|EFH36210.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A8796]
gi|302750461|gb|ADL64638.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339616|gb|EFM05563.1| possible 3-dehydro-L-gulonate-6-phosphate decarboxylase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|315128923|gb|EFT84921.1| hypothetical protein CGSSa03_00915 [Staphylococcus aureus subsp.
aureus CGS03]
gi|320139864|gb|EFW31726.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|329313291|gb|AEB87704.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus T0131]
gi|329724369|gb|EGG60880.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 21172]
gi|329729681|gb|EGG66082.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 21193]
gi|329729865|gb|EGG66257.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus 21189]
Length = 210
Score = 40.5 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAESPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 VIVGGGIANADDPVEAAKQCRA 205
>gi|269123714|ref|YP_003306291.1| inosine-5'-monophosphate dehydrogenase [Streptobacillus
moniliformis DSM 12112]
gi|268315040|gb|ACZ01414.1| inosine-5'-monophosphate dehydrogenase [Streptobacillus
moniliformis DSM 12112]
Length = 486
Score = 40.1 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 72 SSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG----VAINPETPVAILE 127
S + + DAG D+IT + H + + I + K+ + N T A ++
Sbjct: 226 SDTLRRVKALVDAGVDVITVDS-AHGHSKGVIEKIKEIRKEFPNLNLIGGNIVTKQAAID 284
Query: 128 DVIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V +D + + V PG G + + + + +R I + DGG+
Sbjct: 285 LVEAGVDAVKV-GVGPGSICTTRVVSGVGM--PQLSAVMEVAEYCNERGIGVIADGGIKL 341
Query: 181 R-NIKSLVQAGADLLVVG 197
+I + AGAD +++G
Sbjct: 342 SGDIVKAIAAGADCVMLG 359
>gi|158428204|pdb|2E09|A Chain A, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(E74a) From A Hyperthermophile, Pyrococcus Furiosus
gi|158428205|pdb|2E09|B Chain B, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(E74a) From A Hyperthermophile, Pyrococcus Furiosus
Length = 248
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
++++ R +S + + + + + +G D I H +
Sbjct: 69 FWIVKAFRRHSSTPI-VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IAREEGIKTVFLAAPNTPDERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
+L
Sbjct: 243 EEL 245
>gi|87160968|ref|YP_493258.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|161508810|ref|YP_001574469.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|294849214|ref|ZP_06789957.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9754]
gi|119370765|sp|Q2FJ70|HPS_STAA3 RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|87126942|gb|ABD21456.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|160367619|gb|ABX28590.1| possible 3-hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|294823746|gb|EFG40172.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus A9754]
gi|315196496|gb|EFU26845.1| possible 3-hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus CGS01]
gi|320141805|gb|EFW33633.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 210
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAESPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 VIVGGGIANADDPVEAAKQCRA 205
>gi|332286750|ref|YP_004418661.1| thiamine-phosphate pyrophosphorylase [Pusillimonas sp. T7-7]
gi|330430703|gb|AEC22037.1| thiamine-phosphate pyrophosphorylase [Pusillimonas sp. T7-7]
Length = 216
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 152 ESTIPKIRQAKALIGKRS----ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+T+ I Q + L+ R ++ GG+T+ N ++ AGAD + + S F
Sbjct: 146 RATLEHIEQGRMLVENRKERPRAAVVAIGGITADNAGPIIHAGADSVALISGLFESGNIQ 205
Query: 208 SYAKRLNDL 216
+ A R L
Sbjct: 206 AAATRCKAL 214
>gi|91977897|ref|YP_570556.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
BisB5]
gi|91684353|gb|ABE40655.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
BisB5]
Length = 202
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 6/133 (4%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H L I + G G++ + + + + D I + + P
Sbjct: 74 HLHLGQEDLAEADLHEIRSAGLTLGLSTHDDAELET--ALAARPDYIALGPIFPTTLKSM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ IPKI + K G+ I L GG+ + + AGAD + V S +
Sbjct: 132 RFAPQGIPKITEWKKRAGR--IPLVAIGGIKLEQAEEIFAAGADSIAVVSDVTQNPDPDA 189
Query: 209 YAKR-LNDLKKSA 220
+ L+ + ++A
Sbjct: 190 RVRAWLDAVAETA 202
>gi|320162202|ref|YP_004175427.1| hypothetical protein ANT_28010 [Anaerolinea thermophila UNI-1]
gi|319996056|dbj|BAJ64827.1| hypothetical protein ANT_28010 [Anaerolinea thermophila UNI-1]
Length = 447
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG--ADLLVVGSSFFNQKGE 206
+ +A+ R + + V GG I+ + G D+ VGSS FN G
Sbjct: 361 VERAREYC--RGVKIVVSGGFNPDKIRRFEKLGVPVDIYAVGSSLFNNHGP 409
>gi|329913965|ref|ZP_08276014.1| Thiamin-phosphate pyrophosphorylase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545260|gb|EGF30518.1| Thiamin-phosphate pyrophosphorylase [Oxalobacteraceae bacterium
IMCC9480]
Length = 202
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ QA+A+I + + V GG+T N + LV GA ++ SS + A+ + L
Sbjct: 145 LAQARAVID---LPVVVIGGMTVDNARPLVALGAQMVAAISSVYGADAPQLAAREIATL 200
>gi|323199536|gb|EFZ84628.1| epimerase [Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
Length = 75
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
T P GQQ I + K+ Q++ + DGG+T R + L AGA LV+G +
Sbjct: 1 TSEPDGRGQQFIAAMCEKVSQSREHF--PAAECWADGGITLRAARLLAAAGAQHLVIGRA 58
Query: 200 FF 201
F
Sbjct: 59 LF 60
>gi|319403901|emb|CBI77487.1| thiamine-phosphate pyrophosphorylase [Bartonella rochalimae ATCC
BAA-1498]
Length = 201
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 20/203 (9%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G K I + D + I+ ++ D L+I+
Sbjct: 12 SADW------VERLVPFGIKLIQLRIKD----KDTETIIQHIKRAKNICDKFK-VQLVIN 60
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ I D CD I E + I G K G++ + E + I + E
Sbjct: 61 D---YWKIAIDEKCDFIHLGQEDLKSAD--ILAIRKSGIKFGLSTHDEHELDISLSISPE 115
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ L + + KI+Q + IG S+ L GG+T S+++ GA+
Sbjct: 116 Y-IALGPIYPTILKKMKWAPQGLEKIKQWRKKIG--SLPLIGIGGLTPERAISILKIGAN 172
Query: 193 -LLVVGSSFFNQKGEISYAKRLN 214
VV N+K E + +
Sbjct: 173 SAAVVTDIILNKKPEERVQQWIK 195
>gi|297739580|emb|CBI29762.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 40.1 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV 141
CD H S R +RT+ K GV+ TP + ID D I V
Sbjct: 356 VALACDADGVHVGQSDIPARVVRTLLGPEKIIGVSCK--TPEQAEKAWIDGADYIGCGGV 413
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA----DLLVVG 197
P I + K + + + GG+ + N +++++ G + VV
Sbjct: 414 YPTNTKANNITVGLD---GLKTVCLASKLPVVAIGGINASNARTVMEIGVPNLKGVAVV- 469
Query: 198 SSFFNQKGEISYAKRLN-DLKKSALAI 223
S+ F+++ ++ ++L+ DL ++A +
Sbjct: 470 SALFDRECVLTETQKLHGDLTQAAAMV 496
>gi|289809839|ref|ZP_06540468.1| hypothetical protein Salmonellaentericaenterica_37747 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 219
Score = 40.1 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 45/183 (24%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
EI I +AGA +H D D V H ++D++I
Sbjct: 62 ETEILEIARAGADGLHTHKSD----------------WDDLQDIVNLAHQYGLTVDAYIG 105
Query: 80 IIADAGCDIITFH-PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
D I PE + + ++ I +DMI +
Sbjct: 106 HPDDLHTFGIPARTPEEVASVAKRMQDI-------------------------GVDMIGL 140
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
MT G I I + +AL+G + +GG+ N K+ G ++LVVG
Sbjct: 141 MTGMSYEGVAAGDIPQMIK--DRLRALVGAVDVPTLAEGGINLANAKAFKDTGVNILVVG 198
Query: 198 SSF 200
++
Sbjct: 199 TAI 201
>gi|15988170|pdb|1G69|A Chain A, Thiamin Phosphate Synthase
gi|15988171|pdb|1G69|B Chain B, Thiamin Phosphate Synthase
Length = 228
Score = 40.1 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
SI + GG+T N ++QAGAD + + S+ + S A++ +
Sbjct: 173 SIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFRE 219
>gi|254244664|ref|ZP_04937986.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
2192]
gi|126198042|gb|EAZ62105.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
2192]
Length = 282
Score = 40.1 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 173 HIAACGGIDRAIAQARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 221 ELSLDDMRTAVALTAGRA-KLEASGGINESTLRNIAETGVDYISIGT 266
>gi|299134618|ref|ZP_07027810.1| Thiamine-phosphate diphosphorylase [Afipia sp. 1NLS2]
gi|298590428|gb|EFI50631.1| Thiamine-phosphate diphosphorylase [Afipia sp. 1NLS2]
Length = 202
Score = 40.1 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +I + K +IG + L GG+ + + AGAD + V S +
Sbjct: 133 FKPQGIERITRWKQMIG--GLQLVAIGGIKLEHAAEIFAAGADSIAVVSDVTQNADPDAR 190
Query: 210 AKRLND 215
+ D
Sbjct: 191 VRAWLD 196
>gi|148244175|ref|YP_001218869.1| dihydroorotase dehydrogenase [Candidatus Vesicomyosocius okutanii
HA]
gi|146326002|dbj|BAF61145.1| dihydroorotate dehydrogenase [Candidatus Vesicomyosocius okutanii
HA]
Length = 325
Score = 40.1 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 55/158 (34%), Gaps = 30/158 (18%)
Query: 45 PNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLR 104
PN+S+ V+ R + L + D I A D + +
Sbjct: 146 PNMSY--RVVEICRRNTTKPIITKLSPNQTD--IAFSAQRCID-------AGTDGLAVIN 194
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKAL 164
T+ G+AIN T + +I G G + + K+ Q +
Sbjct: 195 TL------MGMAINITTK----KPIIGNN--------QGGVSGPAIKPIALLKVYQVYQV 236
Query: 165 IGKRSISLEVDGGVTSRN-IKSLVQAGADLLVVGSSFF 201
+I + GG+T+ N + AGA + +G++ F
Sbjct: 237 SKHYNIPIIGQGGITTANDAIEFIIAGASAIGIGTALF 274
>gi|254519659|ref|ZP_05131715.1| hps D-arabino 3-hexulose 6-phosphate formaldehyde lyase
[Clostridium sp. 7_2_43FAA]
gi|226913408|gb|EEH98609.1| hps D-arabino 3-hexulose 6-phosphate formaldehyde lyase
[Clostridium sp. 7_2_43FAA]
Length = 206
Score = 40.1 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 158 IRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + + K + ++ + GG+ IK L +++V+GSS K + + +
Sbjct: 144 IYELREFKLKFPLIKNIAIAGGINLEVIKKLKNEEINIVVIGSSITAAKDPMKVLNEIKE 203
>gi|57238939|ref|YP_180075.1| thiamine-phosphate pyrophosphorylase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578872|ref|YP_197084.1| thiamine-phosphate pyrophosphorylase [Ehrlichia ruminantium str.
Welgevonden]
gi|57161018|emb|CAH57924.1| putative thiamine-phosphate pyrophosphorylase [Ehrlichia
ruminantium str. Welgevonden]
gi|58417498|emb|CAI26702.1| Thiamine-phosphate pyrophosphorylase [Ehrlichia ruminantium str.
Welgevonden]
Length = 350
Score = 40.1 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 14/145 (9%)
Query: 77 HINIIADAGCDI--ITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED----VI 130
IN + H + + I G + G++ + +AI I
Sbjct: 211 FINDYWELAIKYKAYGVHLGQEDLQNANFQEIFNAGLRLGISTHCYYELAIARYLSPSYI 270
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+ M N F Q + + + + GG+ N+ S+++ G
Sbjct: 271 AFGPIFPTMLKNMNFMSQG--------VSLLASWVKHLHYRIVAIGGINLSNLDSIIKTG 322
Query: 191 ADLLVVGSSFFNQKGEISYAKRLND 215
D + V S+ N K + D
Sbjct: 323 VDGIAVVSAVINSKYPDKAIREFLD 347
>gi|229542006|ref|ZP_04431066.1| Orotidine 5'-phosphate decarboxylase [Bacillus coagulans 36D1]
gi|229326426|gb|EEN92101.1| Orotidine 5'-phosphate decarboxylase [Bacillus coagulans 36D1]
Length = 206
Score = 40.1 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
R+ L V GG++ N+ ++ D+L++GS+ + A+++ +
Sbjct: 153 RNQQLAVAGGISLENLAAVRALQPDVLIIGSAISKASDPLLAAQKIKE 200
>gi|154483074|ref|ZP_02025522.1| hypothetical protein EUBVEN_00772 [Eubacterium ventriosum ATCC
27560]
gi|210610480|ref|ZP_03288437.1| hypothetical protein CLONEX_00627 [Clostridium nexile DSM 1787]
gi|149736159|gb|EDM52045.1| hypothetical protein EUBVEN_00772 [Eubacterium ventriosum ATCC
27560]
gi|210152473|gb|EEA83479.1| hypothetical protein CLONEX_00627 [Clostridium nexile DSM 1787]
Length = 213
Score = 40.1 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + + + S+ + V GG+ N G D L V S+ Q + A L DL
Sbjct: 145 MEELQKIRAAVSLPIVVIGGINKGNAGRFKPMGIDGLAVVSAIIAQSDIKAAAAELKDL 203
>gi|113477756|ref|YP_723817.1| nicotinate-nucleotide pyrophosphorylase [Trichodesmium erythraeum
IMS101]
gi|110168804|gb|ABG53344.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Trichodesmium erythraeum IMS101]
Length = 290
Score = 40.1 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Query: 92 HPESSPHIRRSLRTIHAMGKKT-GVAINPETPVAILEDVIDEIDMILI--MTVNPGFGGQ 148
H ++ I ++ + + + ET V + + + D+I++ M+V
Sbjct: 174 HIAAAGGIGEAIAKVRERIPYPLTIEVETETLVEVERALEHQADIIMLDNMSVEV----- 228
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+E + IRQ I +E G +T I+++ + G D +
Sbjct: 229 --MEQAVKMIRQ-----NNSRIKIEASGNITLETIRNVAETGVDYI 267
>gi|45358079|ref|NP_987636.1| quinolinate phosphoribosyl transferase [Methanococcus maripaludis
S2]
gi|44920836|emb|CAF30072.1| molybdate transporter subunit [Methanococcus maripaludis S2]
Length = 283
Score = 40.1 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK--GE 206
++ T+ K +A I +I++ GG+T +NI+ + GA+++V S+ + K
Sbjct: 218 KVDSKTVEKFVKAAKEIN-PNITIVAAGGITIQNIEEYAKTGAEVIVT-SALYFGKAADI 275
Query: 207 ISYAKRLN 214
+ ++++
Sbjct: 276 KTIIEKID 283
>gi|294898066|ref|XP_002776141.1| Thiamine biosynthetic bifunctional enzyme, putative [Perkinsus
marinus ATCC 50983]
gi|239882825|gb|EER07957.1| Thiamine biosynthetic bifunctional enzyme, putative [Perkinsus
marinus ATCC 50983]
Length = 297
Score = 40.1 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 67/188 (35%), Gaps = 24/188 (12%)
Query: 23 ISNITKAGAKQIHF---DVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
+++ GA + DV G +V + + L+I D ++
Sbjct: 2 VASAVAGGATCVQLRLKDVSTGDYVKL---------AKETKKLMPRHVPLII---DDRVD 49
Query: 80 IIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI--NPETPVAILEDVIDEI--DM 135
+ +G D H + + R+I K GV+ E +A + D D I
Sbjct: 50 VCMASGADG--VHVGDTDMSVKDARSIIGPNKILGVSTYGRQEDAIAAIRDGADYIATGA 107
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ PG Q L + I K KA +++ + GG++ VQ GAD +
Sbjct: 108 VYPTVTKPGAVAQGLGQIDILK-AALKA--TGKTLPIVAIGGISPVTATDCVQRGADGVC 164
Query: 196 VGSSFFNQ 203
S F+
Sbjct: 165 AVSQIFDS 172
>gi|167746160|ref|ZP_02418287.1| hypothetical protein ANACAC_00856 [Anaerostipes caccae DSM 14662]
gi|317473290|ref|ZP_07932585.1| 3-hexulose-6-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
gi|167654675|gb|EDR98804.1| hypothetical protein ANACAC_00856 [Anaerostipes caccae DSM 14662]
gi|316899126|gb|EFV21145.1| 3-hexulose-6-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
Length = 208
Score = 40.1 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + V GG+ S+ I V ++++VGS+ + + ++ AK + D
Sbjct: 158 KKAQIAVAGGINSKTIDKYVALKPEIIIVGSAIGHAEDPVAEAKAIKD 205
>gi|167748420|ref|ZP_02420547.1| hypothetical protein ANACAC_03164 [Anaerostipes caccae DSM 14662]
gi|167652412|gb|EDR96541.1| hypothetical protein ANACAC_03164 [Anaerostipes caccae DSM 14662]
Length = 208
Score = 40.1 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + V GG+ S+ I V ++++VGS+ + ++ AK + D
Sbjct: 158 KKAQIAVAGGINSKTIGKYVALKPEIIIVGSAIGHADDPVAEAKAIKD 205
>gi|254521014|ref|ZP_05133069.1| thiamine-phosphate pyrophosphorylase [Stenotrophomonas sp. SKA14]
gi|219718605|gb|EED37130.1| thiamine-phosphate pyrophosphorylase [Stenotrophomonas sp. SKA14]
Length = 208
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 175 DGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRL 213
GG+T N+ ++ AGAD + VV SS F + ++ L
Sbjct: 165 IGGLTPDNVGPIIDAGADLVAVV-SSVFAAEDPVATQHAL 203
>gi|83718617|ref|YP_441333.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia thailandensis
E264]
gi|167618182|ref|ZP_02386813.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia thailandensis
Bt4]
gi|257139993|ref|ZP_05588255.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia thailandensis
E264]
gi|83652442|gb|ABC36505.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia thailandensis
E264]
Length = 294
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 198 AAFALNAAVPVQIEVETLDQLRTALAH----GARSVLLDNFTLDMMRDAVRITEGRAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
EV GGV ++++ + G D + +G + I Y+ R+
Sbjct: 253 EVSGGVNFDTVRAIAETGVDRISIG-ALTKDVRAIDYSMRI 292
>gi|167037879|ref|YP_001665457.1| nicotinate phosphoribosyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116296|ref|YP_004186455.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166856713|gb|ABY95121.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929387|gb|ADV80072.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 344
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKR---SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + + + ++ ++ + V GG+ + L ++GAD VGS
Sbjct: 260 VYELRQRLNQKGFTNVKIIVSGGLDPERVAKLSESGADAFGVGSYI 305
>gi|110640190|ref|YP_680400.1| geranylgeranylglyceryl phosphate synthase-like protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110282871|gb|ABG61057.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 254
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN-IKSLVQAGADLLVV 196
+M ++ G G + + I K + I V GGV + + ++AGAD++VV
Sbjct: 173 VMYLDGGSGAAK--PVSAETIAAVKKAVHCPVI---VGGGVNTEEKAFAALEAGADVIVV 227
Query: 197 GSSF 200
G++
Sbjct: 228 GTAI 231
>gi|225019807|ref|ZP_03708999.1| hypothetical protein CLOSTMETH_03760 [Clostridium methylpentosum
DSM 5476]
gi|224947443|gb|EEG28652.1| hypothetical protein CLOSTMETH_03760 [Clostridium methylpentosum
DSM 5476]
Length = 216
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+A+ I + GG+ NI L G A + VV S+ F Q A+R+ L +
Sbjct: 154 IRAICHAVEIPVVAIGGIEQENIHKLSGCGLAGVAVV-SALFAQPDVREAAQRMRVLSER 212
Query: 220 ALA 222
A
Sbjct: 213 VTA 215
>gi|315231052|ref|YP_004071488.1| orotidine 5'-phosphate decarboxylase [Thermococcus barophilus MP]
gi|315184080|gb|ADT84265.1| orotidine 5'-phosphate decarboxylase [Thermococcus barophilus MP]
Length = 209
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+IR + + I + G G K ++AGAD ++VG + +N K L
Sbjct: 144 ERIRYIREKLDG-DIKIFTPGIGAQGGKAKEALKAGADYIIVGRAIYNADNPREAVKSL 201
>gi|167040776|ref|YP_001663761.1| nicotinate phosphoribosyltransferase [Thermoanaerobacter sp. X514]
gi|256750987|ref|ZP_05491870.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter
ethanolicus CCSD1]
gi|300914814|ref|ZP_07132130.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter sp.
X561]
gi|307723952|ref|YP_003903703.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter sp.
X513]
gi|166855016|gb|ABY93425.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter sp.
X514]
gi|256750097|gb|EEU63118.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter
ethanolicus CCSD1]
gi|300889749|gb|EFK84895.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter sp.
X561]
gi|307581013|gb|ADN54412.1| Quinolinate phosphoribosyl transferase [Thermoanaerobacter sp.
X513]
Length = 344
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKR---SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + + + ++ ++ + V GG+ + L ++GAD VGS
Sbjct: 260 VYELRQRLNQKGFTNVKIIVSGGLDPERVAKLSESGADAFGVGSYI 305
>gi|154484792|ref|ZP_02027240.1| hypothetical protein EUBVEN_02510 [Eubacterium ventriosum ATCC
27560]
gi|149734640|gb|EDM50557.1| hypothetical protein EUBVEN_02510 [Eubacterium ventriosum ATCC
27560]
Length = 258
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
I+ +N G G + ES + KA I GGVT+ N ++AGA ++V
Sbjct: 55 HIIILNAG-GSEFFKESKKQALAALKAYPNGMQIG----GGVTAINADDYIRAGATHVIV 109
Query: 197 GSSFFNQKGEISYAKRLNDLKKS 219
S F G ++Y L L K+
Sbjct: 110 TSFVFK-DGRVNYG-NLKSLVKA 130
>gi|15679655|ref|NP_276772.1| tryptophan synthase subunit alpha [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622788|gb|AAB86132.1| tryptophan synthase, subunit alpha [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 273
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 88/239 (36%), Gaps = 45/239 (18%)
Query: 21 EEISNITKAGAKQIHF-----D-VMDGCFVPNISF-----------GADVIRSLRSYSDS 63
E I + AGA + D + DG V +I +R ++
Sbjct: 40 EIIRTLVDAGADALEVGFPFSDPIADGTSVQGADLRALRAGMTTEKCFQLIERVREFTSI 99
Query: 64 VFD-------CHLMISSIDSHINIIADAGCDIIT---FHPESSPHIRRSLRTIHAMGKKT 113
+ M +D A+AG I PE + R+ + + +
Sbjct: 100 PIGLLVYYNLIYRMG--VDEFYRRAAEAGVTGILAADLPPEEASDALRAAEK-YDIDQIF 156
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI--ESTIPKIRQAKALIGKRSIS 171
VA P T L+ + + + G G + ++TI I++ KA + S+
Sbjct: 157 IVA--PTTGSERLKRISEVSSGFHYLVSVMGVTGARSRVEDATIELIKRVKA---EGSLP 211
Query: 172 LEVDG-GVT-SRNIKSLVQAGADLLVVGSSFF-----NQKGEISYAKRLNDLKKSALAI 223
+ V G GV+ +++ L AGAD ++VGS+ N +R++++ + A
Sbjct: 212 VMV-GFGVSRPEHVRMLRDAGADGVIVGSAIIDVISGNLGDRELMLQRIHEMAGTLKAA 269
>gi|121602509|ref|YP_988760.1| thiamine-phosphate pyrophosphorylase [Bartonella bacilliformis
KC583]
gi|120614686|gb|ABM45287.1| thiamine-phosphate pyrophosphorylase [Bartonella bacilliformis
KC583]
Length = 201
Score = 40.1 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 5/141 (3%)
Query: 52 DVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
++IR + ++ D ++ + I D CD I E + + I G
Sbjct: 37 ELIRHHIKRAKNICDQFGAQFIVNDYWEIAIDEKCDFIHLGQEDLNNAD--IPAIRKNGI 94
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
K G++ + E + I E + L + + KI+Q K LIG +
Sbjct: 95 KFGLSTHDEYELDIALSFCPEY-IALGPIYPTILKKMKWPPQGLEKIKQWKKLIG--PLP 151
Query: 172 LEVDGGVTSRNIKSLVQAGAD 192
L GG+T +++Q GA+
Sbjct: 152 LVGIGGLTPERAINVLQVGAN 172
>gi|14520228|ref|NP_125702.1| nicotinate-nucleotide pyrophosphorylase [Pyrococcus abyssi GE5]
gi|5457443|emb|CAB48934.1| nadC nicotinate-nucleotide pyrophosphorylase [Pyrococcus abyssi
GE5]
Length = 279
Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I + K L + +I +EV GG+T NI+ + D++ +G
Sbjct: 219 IEELKRLGLRENIKIEVSGGITPNNIEEYAKLDVDVISLG 258
>gi|91202872|emb|CAJ72511.1| similar to thiamin phosphate synthase [Candidatus Kuenenia
stuttgartiensis]
Length = 219
Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ +R+ K I I+L GG+T N +S++++GA+ + V SS + A
Sbjct: 149 PTGTESLRKLKEKIRIPVIAL---GGITVDNAESVMESGANGIAVVSSILKSDNPENTAL 205
Query: 212 RL 213
RL
Sbjct: 206 RL 207
>gi|15925081|ref|NP_372615.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927666|ref|NP_375199.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus N315]
gi|57650765|ref|YP_186899.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus COL]
gi|87161886|ref|YP_494693.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195994|ref|YP_500807.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268543|ref|YP_001247486.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus JH9]
gi|150394607|ref|YP_001317282.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus JH1]
gi|151222207|ref|YP_001333029.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156980407|ref|YP_001442666.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus Mu3]
gi|221141611|ref|ZP_03566104.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253317153|ref|ZP_04840366.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|255006880|ref|ZP_05145481.2| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257793850|ref|ZP_05642829.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9781]
gi|258407018|ref|ZP_05680168.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9763]
gi|258422039|ref|ZP_05684956.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9719]
gi|258433591|ref|ZP_05688664.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9299]
gi|258440486|ref|ZP_05690656.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A8115]
gi|258445694|ref|ZP_05693872.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A6300]
gi|258450148|ref|ZP_05698243.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A6224]
gi|258453198|ref|ZP_05701189.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A5948]
gi|258453397|ref|ZP_05701379.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A5937]
gi|262049259|ref|ZP_06022134.1| Chain B, thiamin phosphate synthase [Staphylococcus aureus D30]
gi|269203727|ref|YP_003282996.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus ED98]
gi|282894736|ref|ZP_06302962.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A8117]
gi|282923080|ref|ZP_06330765.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9765]
gi|282929016|ref|ZP_06336601.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A10102]
gi|284025126|ref|ZP_06379524.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 132]
gi|294850063|ref|ZP_06790800.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9754]
gi|295407022|ref|ZP_06816824.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A8819]
gi|296276881|ref|ZP_06859388.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus MR1]
gi|297246021|ref|ZP_06929878.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A8796]
gi|304379272|ref|ZP_07362011.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|54039722|sp|P66919|THIE_STAAN RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|54042246|sp|P66918|THIE_STAAM RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|71153597|sp|Q5HEA8|THIE_STAAC RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|122538966|sp|Q2FWG3|THIE_STAA8 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|123484952|sp|Q2FF35|THIE_STAA3 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|166228941|sp|A7X4S8|THIE_STAA1 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|172048981|sp|A6QIT5|THIE_STAAE RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|189030591|sp|A6U3H7|THIE_STAA2 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|189030592|sp|A5IUN7|THIE_STAA9 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|13701886|dbj|BAB43178.1| Chain B, thiamin phosphate synthase [Staphylococcus aureus subsp.
aureus N315]
gi|14247864|dbj|BAB58253.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
Mu50]
gi|57284951|gb|AAW37045.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus COL]
gi|87127860|gb|ABD22374.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203552|gb|ABD31362.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147741612|gb|ABQ49910.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus JH9]
gi|149947059|gb|ABR52995.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus JH1]
gi|150375007|dbj|BAF68267.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722542|dbj|BAF78959.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
Mu3]
gi|257787822|gb|EEV26162.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9781]
gi|257841351|gb|EEV65795.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9763]
gi|257841939|gb|EEV66371.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9719]
gi|257849322|gb|EEV73301.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9299]
gi|257852555|gb|EEV76473.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A8115]
gi|257855533|gb|EEV78470.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A6300]
gi|257856622|gb|EEV79528.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A6224]
gi|257859144|gb|EEV82001.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A5948]
gi|257864378|gb|EEV87124.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A5937]
gi|259162624|gb|EEW47191.1| Chain B, thiamin phosphate synthase [Staphylococcus aureus D30]
gi|262076017|gb|ACY11990.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus ED98]
gi|269941691|emb|CBI50098.1| putative thiamine-phosphate pyrophosphorylase [Staphylococcus
aureus subsp. aureus TW20]
gi|282589322|gb|EFB94414.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A10102]
gi|282593271|gb|EFB98268.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9765]
gi|282762824|gb|EFC02958.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A8117]
gi|285817756|gb|ADC38243.1| Thiamin-phosphate pyrophosphorylase [Staphylococcus aureus
04-02981]
gi|294823011|gb|EFG39443.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9754]
gi|294968047|gb|EFG44074.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A8819]
gi|297177020|gb|EFH36275.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A8796]
gi|302751972|gb|ADL66149.1| putative thiamine-phosphate pyrophosphorylase [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|304342131|gb|EFM08031.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312830443|emb|CBX35285.1| thiamine-phosphate pyrophosphorylase (TMPpyrophosphorylase)
(TMP-PPase) (Thiamine-phosphate synthase)
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128762|gb|EFT84762.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196975|gb|EFU27317.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140736|gb|EFW32588.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|329314776|gb|AEB89189.1| Thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus T0131]
gi|329724050|gb|EGG60574.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus 21189]
gi|329726303|gb|EGG62771.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus 21172]
gi|329729269|gb|EGG65677.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus 21193]
Length = 213
Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I I K + + + + GG+ + N+ +V+AGA+ + V S+ +
Sbjct: 147 IPVGPEMIATFKEMNPQ--LPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIEKTV 204
Query: 211 KRLNDL 216
R D
Sbjct: 205 NRFKDF 210
>gi|320143712|gb|EFW35489.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 213
Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I I K + + + + GG+ + N+ +V+AGA+ + V S+ +
Sbjct: 147 IPVGPEMIATFKEMNPQ--LPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIEKTV 204
Query: 211 KRLNDL 216
R D
Sbjct: 205 NRFKDF 210
>gi|114704350|ref|ZP_01437258.1| thiamine-phosphate pyrophosphorylase protein [Fulvimarina pelagi
HTCC2506]
gi|114539135|gb|EAU42255.1| thiamine-phosphate pyrophosphorylase protein [Fulvimarina pelagi
HTCC2506]
Length = 201
Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 76/208 (36%), Gaps = 22/208 (10%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ I + G + + V D + ++ +R S V + H
Sbjct: 12 SADW------IERLVPLGVRLVQLRVKD-------ASREALLEHIRR-SREVCNAHGCQL 57
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
++ + + + GCD H +R + I G K GV+ + E +A
Sbjct: 58 VVNDYWKLAIEEGCDF--VHLGQEDLLRADVPAIRKAGLKLGVSTHDEAELAAALAADP- 114
Query: 133 IDMILIMTVNPGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D + + + P + T K+ + +G I L GG+T + + +GA
Sbjct: 115 -DYVALGPIWPTILKAMKWAPQTPEKLNTWRRAVG--DIPLVAIGGITVERLPQVFASGA 171
Query: 192 DLLVVGSSFFNQKGEIS-YAKRLNDLKK 218
D+ V + + + A+ + ++
Sbjct: 172 DIAAVVTDITRNEDPEARTAEWIAATRR 199
>gi|327400807|ref|YP_004341646.1| orotidine 5'-phosphate decarboxylase [Archaeoglobus veneficus SNP6]
gi|327316315|gb|AEA46931.1| orotidine 5'-phosphate decarboxylase [Archaeoglobus veneficus SNP6]
Length = 212
Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 72/193 (37%), Gaps = 26/193 (13%)
Query: 52 DVIRSLRSYSDSV-FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG 110
++ R +R Y D+ + L++S S + ++ G I F PHI + I
Sbjct: 18 NIAREIREYVDAFKVNYPLVLSEGISVVKELSSYGPVIADFKIADVPHISAMIAEIAFEN 77
Query: 111 KKTGVAINPETPVAILEDVID----EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
V + T ++ V+D + ++T GGQ+ + +I + +G
Sbjct: 78 GAKAVITHGFTGSDSVKAVLDVASRYNGEVYVVTELSSAGGQEFMTGVAERIVEMARNLG 137
Query: 167 KRSI--------SL----EVDG-------GVTSR--NIKSLVQAGADLLVVGSSFFNQKG 205
+ + E+ G GV ++ ++AGAD ++VG S +
Sbjct: 138 CHGLIAPATRPERIRKLRELAGNMQILSPGVGAQGGKAAEAIRAGADFVIVGRSIYEGNA 197
Query: 206 EISYAKRLNDLKK 218
+ LK+
Sbjct: 198 VENARLLAEQLKE 210
>gi|316933143|ref|YP_004108125.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
DX-1]
gi|315600857|gb|ADU43392.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
DX-1]
Length = 202
Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H L I + G G++ + + + + E D I + + P
Sbjct: 74 HLHLGQEDLAEADLAEIRSAGLTLGLSTHDDAELET--ALAAEPDYIALGPIFPTTLKSM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ IPKI + K +G I L GG+ + + + AGAD + V S +
Sbjct: 132 RFAPQGIPKITEWKKRVGA--IPLVAIGGIKLEHAEEIFAAGADSIAVVSDVTQNPDPDA 189
Query: 209 YAKRLNDL 216
+ D
Sbjct: 190 RVRAWLDF 197
>gi|167950780|ref|ZP_02537854.1| Phosphomethylpyrimidine kinase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 445
Score = 40.1 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
+ + + L GG+T N + L+ AGAD+
Sbjct: 413 LRQARHEIDLPLVAIGGITPENGRPLIDAGADM 445
>gi|323485910|ref|ZP_08091245.1| thiamine-phosphate pyrophosphorylase [Clostridium symbiosum
WAL-14163]
gi|323400898|gb|EGA93261.1| thiamine-phosphate pyrophosphorylase [Clostridium symbiosum
WAL-14163]
Length = 213
Score = 40.1 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + + + S+ + V GG+ N G D L V S+ Q + A L DL
Sbjct: 145 MEELQKIRTAVSLPIVVIGGINKGNAGRFKPMGIDGLAVVSAIIAQSDIKAAAAELKDL 203
>gi|291548620|emb|CBL24882.1| thiamine-phosphate diphosphorylase [Ruminococcus torques L2-14]
Length = 215
Score = 40.1 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K + K I + GG+T N+K L +G + + V S+ F QK + +L
Sbjct: 155 LKEICTKVDIPVVAIGGITQDNVKELSGSGINGVAVISAIFAQKDIETATAKLKS 209
>gi|288939865|ref|YP_003442105.1| thiamine-phosphate pyrophosphorylase [Allochromatium vinosum DSM
180]
gi|288895237|gb|ADC61073.1| thiamine-phosphate pyrophosphorylase [Allochromatium vinosum DSM
180]
Length = 212
Score = 40.1 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ ++ L GG+T N L+ AGAD+L V + F Q + A+ +L
Sbjct: 151 LTEARRRVTLPLVAIGGITPHNGGPLIAAGADMLAVVTGVFAQADITAAARAYTNL 206
>gi|317472043|ref|ZP_07931375.1| 3-hexulose-6-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
gi|316900447|gb|EFV22429.1| 3-hexulose-6-phosphate synthase [Anaerostipes sp. 3_2_56FAA]
Length = 208
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + V GG+ S+ I V ++++VGS+ + ++ AK + D
Sbjct: 158 KKAQIAVAGGINSKTIDKYVALKPEIIIVGSAIGHADDPVAEAKAIKD 205
>gi|157273518|gb|ABV27417.1| nicotinate-nucleotide pyrophosphorylase [Candidatus
Chloracidobacterium thermophilum]
Length = 285
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDEI----DMILI--MTVNPGFGGQQLIESTIPK 157
R + K + E V+ +E + + + D+IL+ M+V + + +
Sbjct: 178 RALRLAKKNASHLLKIEVEVSTVEQIAEAVAEGADVILLDNMSVE-------QVRDCVAR 230
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
IR+ R +EV G ++ N+++ +AGADL+ VG
Sbjct: 231 IREL--EPPGRQTLIEVSGNISLDNVRAYAEAGADLISVG 268
>gi|161529303|ref|YP_001583129.1| geranylgeranylglyceryl phosphate synthase-like protein
[Nitrosopumilus maritimus SCM1]
gi|206557779|sp|A9A3Z1|GGGPS_NITMS RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|160340604|gb|ABX13691.1| geranylgeranylglyceryl phosphate synthase [Nitrosopumilus maritimus
SCM1]
Length = 250
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTS-RNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
T ++ + L + GG+ + ++LV+AGAD LV+G+ F +KG K+
Sbjct: 186 TPEMVKTVRQLF--NGFLIVG-GGIKDVKTAQNLVKAGADALVIGT--FLEKGGS--LKK 238
Query: 213 LNDLKKS 219
L ++ K+
Sbjct: 239 LEEITKA 245
>gi|186685325|ref|YP_001868521.1| nicotinate-nucleotide pyrophosphorylase [Nostoc punctiforme PCC
73102]
gi|186467777|gb|ACC83578.1| nicotinate-nucleotide pyrophosphorylase [Nostoc punctiforme PCC
73102]
Length = 288
Score = 39.8 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPET-PVAILEDVI-DEIDMILIMTVNPGFGGQQ 149
H ++ I +++ I + + I ET + +++ + ++D+I++
Sbjct: 175 HIAAAGGIEKAVTRIRSQIPYP-LTIEVETESLEQVKEALQHDVDIIML----------- 222
Query: 150 LIESTIPKIRQAKALIGKRS--ISLEVDGGVTSRNIKSLVQAGADLL 194
+ +R+A LI ++ + +E G VT I+ + + G D +
Sbjct: 223 -DNMPVDMMREAVQLIRQQDSRVKIEASGNVTLETIRGVAETGVDYI 268
>gi|160893715|ref|ZP_02074499.1| hypothetical protein CLOL250_01269 [Clostridium sp. L2-50]
gi|156864700|gb|EDO58131.1| hypothetical protein CLOL250_01269 [Clostridium sp. L2-50]
Length = 258
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ L++ GG+ + N + GA ++V S F GEI+Y L ++++
Sbjct: 80 EYPGGLQIGGGINAENAGRFLDMGASHVIVTSYVFK-NGEINY-DNLTAIRRA 130
>gi|196019646|ref|XP_002119014.1| hypothetical protein TRIADDRAFT_62984 [Trichoplax adhaerens]
gi|190577312|gb|EDV18500.1| hypothetical protein TRIADDRAFT_62984 [Trichoplax adhaerens]
Length = 214
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI---- 207
I +I K +I + GG+ NI L+ + D + S+ FN +
Sbjct: 145 PIGIEEISLLTKNKIKPTILI---GGIKLDNIHQLMNSNVDGFAISSAIFNDQNPKIQAS 201
Query: 208 SYAKRLNDLKKSA 220
+ ++N+L+K A
Sbjct: 202 KFKFKINELQKGA 214
>gi|251794789|ref|YP_003009520.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Paenibacillus sp. JDR-2]
gi|247542415|gb|ACS99433.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Paenibacillus sp. JDR-2]
Length = 252
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ L++ GG+T+ N ++AGA ++V S F +++LK+
Sbjct: 73 EYPGGLQIGGGITADNAAKYLEAGASQVIVTSYIFRDGEL-----NMDNLKR 119
>gi|182682298|ref|YP_001830458.1| thiamine-phosphate pyrophosphorylase [Xylella fastidiosa M23]
gi|182632408|gb|ACB93184.1| thiamine-phosphate pyrophosphorylase [Xylella fastidiosa M23]
gi|307578575|gb|ADN62544.1| thiamine-phosphate pyrophosphorylase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 204
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ + GG+T +NI +++AGA+LL V S ++ K I+ K
Sbjct: 145 ELLRQTTHLGVPRVAIGGLTPKNIAPIIEAGAELLAVISGIYSAKNPITALKA 197
>gi|70727419|ref|YP_254335.1| hypothetical protein SH2420 [Staphylococcus haemolyticus JCSC1435]
gi|119370768|sp|Q4L3P8|HPS_STAHJ RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|68448145|dbj|BAE05729.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 210
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVVTILGVAEDASIKAAVEEAHKHDKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLDSLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAEQPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+ D
Sbjct: 184 VIVGGGIANADDPVEAAKQCRD 205
>gi|325971826|ref|YP_004248017.1| dihydroorotate dehydrogenase [Spirochaeta sp. Buddy]
gi|324027064|gb|ADY13823.1| dihydroorotate dehydrogenase family protein [Spirochaeta sp. Buddy]
Length = 577
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
VAIN P+ L+ V + + G G+Q+ + + + + G + +
Sbjct: 200 VAINTVGPIVHLDPVSGMPILQNKLGGKGGCSGKQIFSAALHAVTAIRHACGDAIPLIAM 259
Query: 175 DGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
GGV T + LVQAGAD + +GS+ + + L +K A A+
Sbjct: 260 -GGVSTGDEVALLVQAGADAVGIGSAL-GTVDQQDWPSYLYAVKTEAEAL 307
>gi|255025884|ref|ZP_05297870.1| hypothetical protein LmonocytFSL_05245 [Listeria monocytogenes FSL
J2-003]
Length = 46
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++ L GAD+ VVG++ + SY ++L L++
Sbjct: 3 EETVRLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLRE 41
>gi|20141660|sp|O58462|PYRF_PYRHO RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
gi|88192706|pdb|2CZ5|A Chain A, Crystal Structure Of Orotidine 5'-Phosphate Decarboxylase
From Pyrococcus Horikoshii Ot3
gi|88192707|pdb|2CZ5|B Chain B, Crystal Structure Of Orotidine 5'-Phosphate Decarboxylase
From Pyrococcus Horikoshii Ot3
gi|88192716|pdb|2CZD|A Chain A, Crystal Structure Of Orotidine 5'-Phosphate Decarboxylase
From Pyrococcus Horikoshii Ot3 At 1.6 A Resolution
gi|88192717|pdb|2CZD|B Chain B, Crystal Structure Of Orotidine 5'-Phosphate Decarboxylase
From Pyrococcus Horikoshii Ot3 At 1.6 A Resolution
gi|88192718|pdb|2CZE|A Chain A, Crystal Structure Of Orotidine 5'-Phosphate Decarboxylase
From Pyrococcus Horikoshii Ot3 Complexed With Ump
gi|88192719|pdb|2CZE|B Chain B, Crystal Structure Of Orotidine 5'-Phosphate Decarboxylase
From Pyrococcus Horikoshii Ot3 Complexed With Ump
gi|88192720|pdb|2CZF|A Chain A, Crystal Structure Of Orotidine 5'-Phosphate Decarboxylase
From Pyrococcus Horikoshii Ot3 Complexed With Xmp
gi|88192721|pdb|2CZF|B Chain B, Crystal Structure Of Orotidine 5'-Phosphate Decarboxylase
From Pyrococcus Horikoshii Ot3 Complexed With Xmp
Length = 208
Score = 39.8 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+I + + + I + G G K V+AGAD ++VG + +N AK +
Sbjct: 144 ERIGYIRDRLKE-GIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIY 202
Query: 215 D 215
D
Sbjct: 203 D 203
>gi|261350226|ref|ZP_05975643.1| thiamine-phosphate diphosphorylase [Methanobrevibacter smithii DSM
2374]
gi|288861012|gb|EFC93310.1| thiamine-phosphate diphosphorylase [Methanobrevibacter smithii DSM
2374]
Length = 209
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H S ++ R++ K GV+ + D D I + V P +
Sbjct: 83 VHVGQSDMPAKTARSMIGEDKILGVSAANIK--EAKKAQRDSADYIGVGAVYP--TNTKD 138
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISY 209
+++PK ++ K ++ I + GG+T N L G D L VV S+ K
Sbjct: 139 DATSVPK-KELKEIVKSVDIPVVAIGGITQENAHELNDCGIDGLSVV-SAIMEAKNPKIA 196
Query: 210 AKRL 213
+K L
Sbjct: 197 SKNL 200
>gi|72161450|ref|YP_289107.1| thiamine-phosphate pyrophosphorylase [Thermobifida fusca YX]
gi|123629789|sp|Q47R33|THIE_THEFY RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|71915182|gb|AAZ55084.1| thiamine monophosphate synthase [Thermobifida fusca YX]
Length = 218
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 155 IPKIRQAKALIGKRS-ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ ++ + AL +R ++ GG+ N+ ++ AGA VV + + + A L
Sbjct: 152 LDEVARVAALHPQRPWFAI---GGINEDNLDQVLAAGARRAVVVRAITEAEDPRAAAAEL 208
Query: 214 NDLKKSALAI 223
+A A
Sbjct: 209 KRRLVAAAAA 218
>gi|320107246|ref|YP_004182836.1| Thiamine-phosphate diphosphorylase [Terriglobus saanensis SP1PR4]
gi|319925767|gb|ADV82842.1| Thiamine-phosphate diphosphorylase [Terriglobus saanensis SP1PR4]
Length = 218
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKR 212
+R A+AL K +++ GG+ N S+++AGAD + V+ S+ ++ A+
Sbjct: 161 VRSARALTKKPLVAI---GGIKLENAASVLEAGADSVAVI-SALLEGGNPVTQARA 212
>gi|30249395|ref|NP_841465.1| thiamine monophosphate synthase [Nitrosomonas europaea ATCC 19718]
gi|41018324|sp|Q82UQ7|THIE_NITEU RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|30138758|emb|CAD85335.1| Thiamine monophosphate synthase (TMP) [Nitrosomonas europaea ATCC
19718]
Length = 214
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I A K I + GG+ N L+ +G D + V + F + S A+ ++L
Sbjct: 154 IELLTAAKKKLGIPVVAIGGIDLDNAGMLIASGCDAVAVSQALFGAQDIQSAARYFSEL 212
>gi|325095545|gb|EGC48855.1| 5-proFAR isomerase [Ajellomyces capsulatus H88]
Length = 258
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
L+V GG+ +N + ++AGA+ +V+ S F
Sbjct: 79 LQVAGGINDKNARYWIEAGAEKVVITSYLF 108
>gi|322418169|ref|YP_004197392.1| phosphomethylpyrimidine kinase [Geobacter sp. M18]
gi|320124556|gb|ADW12116.1| phosphomethylpyrimidine kinase [Geobacter sp. M18]
Length = 485
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L K I + GG+T N +++ AGAD + V S+ + A L+ L
Sbjct: 154 EALAQLKEKVQIPVVAIGGITRDNACAVIDAGADAIAVISAVLTARSPGLAATELSLL 211
>gi|225557815|gb|EEH06100.1| 5-proFAR isomerase [Ajellomyces capsulatus G186AR]
Length = 258
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
L+V GG+ +N + ++AGA+ +V+ S F
Sbjct: 79 LQVAGGINDKNARYWIEAGAEKVVITSYLF 108
>gi|223042738|ref|ZP_03612786.1| 3-hexulose-6-phosphate synthase [Staphylococcus capitis SK14]
gi|222443592|gb|EEE49689.1| 3-hexulose-6-phosphate synthase [Staphylococcus capitis SK14]
Length = 210
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H GK+ V + + +DE+
Sbjct: 67 DYEVSQAVKFGADVVTILGVAEDASIKAAVEEAHKHGKELLVDMIAVQDLETRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLDSLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAEEPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+ D
Sbjct: 184 VIVGGGIANADDPVVAAKQCRD 205
>gi|255071609|ref|XP_002499479.1| predicted protein [Micromonas sp. RCC299]
gi|226514741|gb|ACO60737.1| predicted protein [Micromonas sp. RCC299]
Length = 310
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L+V GGVT+ L+ AGA ++V S F +RL+ + K+
Sbjct: 130 LQVGGGVTAETAMPLIDAGASHVIVTSYVFR--DGAVDQERLDAIVKA 175
>gi|254446046|ref|ZP_05059522.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Verrucomicrobiae bacterium DG1235]
gi|198260354|gb|EDY84662.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Verrucomicrobiae bacterium DG1235]
Length = 255
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GGVT+ N ++AGA ++V S F +G + + +RL L
Sbjct: 83 GGVTAENAAEYLEAGASQVIVTSYVFR-EGRVDF-ERLEKL 121
>gi|167580118|ref|ZP_02372992.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia thailandensis
TXDOH]
Length = 294
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 198 AAFALNAAVPVQIEVETLDQLRTALAH----GARSVLLDNFTLDMMRDAVRITEGRAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 253 EVSGGVNFDTVRAIAETGVD 272
>gi|110833216|ref|YP_692075.1| thiamine-phosphate diphosphorylase [Alcanivorax borkumensis SK2]
gi|110646327|emb|CAL15803.1| thiamine-phosphate diphosphorylase [Alcanivorax borkumensis SK2]
Length = 236
Score = 39.8 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYA 210
+++ +RQA + +++ GGV N L+ AGA + V+ + F Q +
Sbjct: 164 PASLALLRQACQQFHQPVVAI---GGVNPDNAPQLINAGAVSVAVI-HALFGQTDTDAIE 219
Query: 211 KRLNDL 216
L
Sbjct: 220 AAARQL 225
>gi|42742277|gb|AAS45241.1| indole-3-glycerol phosphate lyase [Hordeum lechleri]
Length = 280
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ-----QLIESTIPKIRQAKALIGKRS 169
+ P TP ++++ + + + G G +ES + KI+Q
Sbjct: 166 LLTTPSTPPERMKEITEASGGFVYLVSVDGVRGARATVNPRVESLLKKIKQVTDKAVAVG 225
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ T ++K + + GAD +++GS+ Q GE +
Sbjct: 226 FGIS-----TPDHVKQIAEWGADGVIIGSAMVKQLGEAA 259
>gi|15836980|ref|NP_297668.1| thiamine-phosphate pyrophosphorylase [Xylella fastidiosa 9a5c]
gi|47606217|sp|Q9PGC4|THIE_XYLFA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|9105210|gb|AAF83188.1|AE003889_5 thiamin-phosphate pyrophosphorylase [Xylella fastidiosa 9a5c]
Length = 234
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ + GG+T +NI +++AGA+LL V S ++ K ++ K
Sbjct: 175 ELLRQTTHLGVPRVAIGGLTPKNIAPIIEAGAELLAVISGIYSAKNPVTALKA 227
>gi|285018056|ref|YP_003375767.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas albilineans
GPE PC73]
gi|283473274|emb|CBA15779.1| probable nicotinate-nucleotide pyrophosphorylase protein
[Xanthomonas albilineans]
Length = 292
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ A +R I LEV GGV I+++ + G D +
Sbjct: 233 VAIASNEFHQRGIPLEVSGGVDLDTIRAIAEDGVDCI 269
>gi|253733075|ref|ZP_04867240.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253728983|gb|EES97712.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
TCH130]
Length = 214
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I I K + + + + GG+ + N+ +V+AGA+ + V S+ +
Sbjct: 147 IPVGPEMIATFKEMNPQ--LPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIEKTV 204
Query: 211 KRLNDL 216
R D
Sbjct: 205 NRFKDF 210
>gi|229828404|ref|ZP_04454473.1| hypothetical protein GCWU000342_00465 [Shuttleworthia satelles DSM
14600]
gi|229792998|gb|EEP29112.1| hypothetical protein GCWU000342_00465 [Shuttleworthia satelles DSM
14600]
Length = 269
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++A A + L++ GG+T+ N + AGA ++V S F ++G+++Y RL DL +
Sbjct: 72 QEALAALAAYPGGLQIGGGITADNAGVYLDAGASHVIVTSYVF-ERGQVNY-DRLRDLVE 129
>gi|222152809|ref|YP_002561986.1| hypothetical protein SUB0646 [Streptococcus uberis 0140J]
gi|222113622|emb|CAR41495.1| conserved hypothetical protein [Streptococcus uberis 0140J]
Length = 226
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 37/220 (16%), Positives = 81/220 (36%), Gaps = 44/220 (20%)
Query: 1 MTPSIQIVPSILAADFSRLGEEISNITK-----AGAKQIHFDVMDGCFVPNISFGADVIR 55
MT + PS+++ L +EI + + +G G + ++ F DV
Sbjct: 1 MTEKKLVAPSVMS----DLRKEIIKMPEVIRECSGIYVY------GRRIKSVLFSTDVAL 50
Query: 56 SLRSYSDSVFDCHLMISSIDSH--------INIIADAGCDIITFHPESSPHIRRSLRTIH 107
+ +D+V + + + ++A G + T ++ +
Sbjct: 51 IANNNADAVLAVYPFTPNPAVLKSIMLVSSVPVLAGVGGGLTTGFRSANMSLFS------ 104
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF--------GGQQLI-----EST 154
V +N T + ++D+ D ID+ +I TV F G ++ +T
Sbjct: 105 ESEGAFAVVVNGPTKIDTIKDINDFIDIPIIYTVVSEFSDIRGRIEAGVDILNVSGGPNT 164
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ +++ + + GG T I+ ++ AGA+ +
Sbjct: 165 VKIVKKIREEF--PDFPIMATGGPTEETIREVIAAGANAI 202
>gi|222150287|ref|YP_002559440.1| hexulose-6-phosphate synthase [Macrococcus caseolyticus JCSC5402]
gi|222119409|dbj|BAH16744.1| hexulose-6-phosphate synthase [Macrococcus caseolyticus JCSC5402]
Length = 211
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q S + +R K++I + + V GG+ I+++ DL++VG
Sbjct: 131 IAVHTGYDLQAEGVSPLESLRTVKSVIS--NSKVAVAGGIKPDTIETVAAEKPDLIIVGG 188
Query: 199 SFFNQKGEISYAKRLNDLKKS 219
N + AK+ ++ +
Sbjct: 189 GIANADDPKAAAKKCREIVDA 209
>gi|114327753|ref|YP_744910.1| thiamin-phosphate pyrophosphorylase [Granulibacter bethesdensis
CGDNIH1]
gi|114315927|gb|ABI61987.1| thiamin-phosphate pyrophosphorylase [Granulibacter bethesdensis
CGDNIH1]
Length = 214
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISY-AKRLNDLKKSA 220
++ S+++ GG+ N LV+AGAD L V+G + +N K LN ++A
Sbjct: 154 EMMELPSVAI---GGIDPTNAAPLVKAGADFLAVIG-AVWNHPDGPDAGVKALNTAIQAA 209
Query: 221 LAID 224
L D
Sbjct: 210 LTDD 213
>gi|71276550|ref|ZP_00652824.1| Thiamine monophosphate synthase [Xylella fastidiosa Dixon]
gi|71901097|ref|ZP_00683205.1| Thiamine monophosphate synthase [Xylella fastidiosa Ann-1]
gi|170730933|ref|YP_001776366.1| thiamine-phosphate pyrophosphorylase [Xylella fastidiosa M12]
gi|71162621|gb|EAO12349.1| Thiamine monophosphate synthase [Xylella fastidiosa Dixon]
gi|71729140|gb|EAO31263.1| Thiamine monophosphate synthase [Xylella fastidiosa Ann-1]
gi|167965726|gb|ACA12736.1| Thiamine-phosphate diphosphorylase [Xylella fastidiosa M12]
Length = 204
Score = 39.8 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ + GG+T +NI +++AGA+LL V S ++ K I+ K
Sbjct: 145 ELLHQTTHLGVPRVAIGGLTPKNIAPIIEAGAELLAVISGIYSAKNPITALKA 197
>gi|195953324|ref|YP_002121614.1| modD protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932936|gb|ACG57636.1| modD protein [Hydrogenobaculum sp. Y04AAS1]
Length = 279
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 19/126 (15%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + ++ + V+ + + ID +DMI +L
Sbjct: 172 HEDLLKAVKNLKQRAKEHKICVEVS-----SLEEILGFIDIVDMIQF---------DKLN 217
Query: 152 ESTIPK-IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ K ++ K+L + + GG+ N++ G D+LV SS + + +
Sbjct: 218 PELLEKAVKHIKSLKPEMVVL--AAGGINMSNVEQYASTGVDVLVT-SSLYQAP-MMDFK 273
Query: 211 KRLNDL 216
+ L
Sbjct: 274 ADIRPL 279
>gi|254470709|ref|ZP_05084112.1| thiamine-phosphate pyrophosphorylase [Pseudovibrio sp. JE062]
gi|211959851|gb|EEA95048.1| thiamine-phosphate pyrophosphorylase [Pseudovibrio sp. JE062]
Length = 210
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + + GG++ N +++AGAD + V S+ ++L ++ KS
Sbjct: 153 QSQLPVVGIGGISLANADQVIKAGADGVAVISAICGAPSAAEATRKLQEIVKS 205
>gi|206895739|ref|YP_002246378.1| thiamine-phosphate pyrophosphorylase [Coprothermobacter
proteolyticus DSM 5265]
gi|254784180|sp|B5Y6I1|THIE_COPPD RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|206738356|gb|ACI17434.1| thiamine-phosphate pyrophosphorylase [Coprothermobacter
proteolyticus DSM 5265]
Length = 211
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ K + S+ GG+ N K ++ AGA + V S+ +QK AK L +L
Sbjct: 151 VDMLKMICQSTSLPCVAIGGINVNNAKIVLDAGAIGIAVISAVVSQKDITGAAKALREL 209
>gi|145298411|ref|YP_001141252.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142851183|gb|ABO89504.1| tryptophan biosynthesis protein trpCF [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 461
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 23/155 (14%)
Query: 50 GADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSP------HIRRSL 103
G + Y D +M + S++ + +A I E+ H
Sbjct: 284 GLIFVAKSPRYVDIPTARAVMAGAPLSYVGVFRNAMPATIVQTVEALGLAAVQLHGDEDA 343
Query: 104 RTIH--------AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
I + + + P+ L+ D + + + G GQ + +
Sbjct: 344 AYIEALRPLLPASCQVWKAIGVTSGEPLPALDYPADRLLLDTKVGSQSGGTGQAFDWAML 403
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+ +AK ++ GG+ N + G
Sbjct: 404 ANLNKAKLMLA---------GGLNPDNALQAAEVG 429
>gi|193212115|ref|YP_001998068.1| modD protein [Chlorobaculum parvum NCIB 8327]
gi|193085592|gb|ACF10868.1| modD protein [Chlorobaculum parvum NCIB 8327]
Length = 282
Score = 39.8 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
GG+ N + G D++V+ S +F + +I
Sbjct: 244 GGINPENAAAYAATGIDIIVMSSVYFGKPSDIKAV 278
>gi|322371549|ref|ZP_08046095.1| inosine-5'-monophosphate dehydrogenase [Haladaptatus
paucihalophilus DX253]
gi|320548840|gb|EFW90508.1| inosine-5'-monophosphate dehydrogenase [Haladaptatus
paucihalophilus DX253]
Length = 346
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 48/149 (32%), Gaps = 20/149 (13%)
Query: 79 NIIADAGCDIITF-----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
DAG D I H E + I A + + D+
Sbjct: 96 EATLDAGGDCIMVDVAHGHMERCLDA---VSEIKAEFPDAELVAGNVVTPEAVSDLYSAG 152
Query: 134 DMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKS 185
+ + V PG G + + + + I + DGG+ TS +
Sbjct: 153 ADGVKVGVGPGSHCTTRKVAGTGV--PQLTAVDDCSDRADELGIPIVADGGIRTSGDAAK 210
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD +++GS F E + + +
Sbjct: 211 ALMAGADTVMMGS--FFAGTEEAPGETVT 237
>gi|153854562|ref|ZP_01995832.1| hypothetical protein DORLON_01827 [Dorea longicatena DSM 13814]
gi|149752871|gb|EDM62802.1| hypothetical protein DORLON_01827 [Dorea longicatena DSM 13814]
Length = 255
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + KAL + L++ GG+T+ N + ++AGA ++V S F K Y L +L
Sbjct: 71 KRQALKALQTYQDG-LQIGGGITAENAEEYMKAGASHVIVTSYVF--KNGEIYWDNLQNL 127
>gi|114797291|ref|YP_761860.1| thiamine-phosphate pyrophosphorylase [Hyphomonas neptunium ATCC
15444]
gi|123027654|sp|Q0BXD3|THIE_HYPNA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|114737465|gb|ABI75590.1| thiamine-phosphate pyrophosphorylase [Hyphomonas neptunium ATCC
15444]
Length = 221
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKS 219
GG+T N LV AGAD L V S +N + + + N L +S
Sbjct: 174 IGGITVSNAAPLVTAGADFLAVSSGVWNHEDGPAAAVRAFNALFES 219
>gi|314932795|ref|ZP_07840164.1| 3-hexulose-6-phosphate synthase [Staphylococcus caprae C87]
gi|313654476|gb|EFS18229.1| 3-hexulose-6-phosphate synthase [Staphylococcus caprae C87]
Length = 210
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D++T + I+ ++ H GK+ V + + +DE+
Sbjct: 67 DYEVSQAVKFGADVVTILGVAEDASIKAAVEEAHKHGKELLVDMIAVQDLETRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLDSLRTVKSVI--KNSKVAVAGGIKPDTIKDIVTEEPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+ D
Sbjct: 184 VIVGGGIANADDPVEAAKQCRD 205
>gi|294496025|ref|YP_003542518.1| orotidine-5'-phosphate decarboxylase [Methanohalophilus mahii DSM
5219]
gi|292667024|gb|ADE36873.1| orotidine-5'-phosphate decarboxylase [Methanohalophilus mahii DSM
5219]
Length = 215
Score = 39.8 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 6/168 (3%)
Query: 50 GADVIRSLRSYSDSVFDCHLM-ISSIDSHI-NIIADAGCDIITFHPESSPH-IRRSLRTI 106
G VI L Y+ + D + I + D I + AG + H + ++ +
Sbjct: 44 GLSVISRLADYAPVIADFKVADIPNTDELICEQVFKAGASGVIVHGFTGEDSLKACIDVS 103
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
G V P + D I M G G + +++ +++IG
Sbjct: 104 RLYGGDIYVVSEMSHPGGA-KYFQPIADEIASMAYEFGATGIVAPATRPERVKHLRSIIG 162
Query: 167 KRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+S+ G G ++ AGA+ ++VG S +N + A L
Sbjct: 163 D-ELSIISPGVGAQGGKASDVIAAGANWIIVGRSIYNSEHPKETAMEL 209
>gi|161350007|ref|NP_143058.2| thiamine-phosphate pyrophosphorylase [Pyrococcus horikoshii OT3]
gi|7388303|sp|O58878|THIE_PYRHO RecName: Full=Probable thiamine-phosphate pyrophosphorylase;
Short=TMP pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
Length = 207
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 26/64 (40%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + ++ I + GG+ N++ ++ G D + V S+ + + L +
Sbjct: 143 IEGLREIVNAVKIPVVAIGGINLENVREVLLTGVDGIAVVSAVMGTEDVKRATEGLRRII 202
Query: 218 KSAL 221
+ L
Sbjct: 203 EEVL 206
>gi|28199562|ref|NP_779876.1| thiamine-phosphate pyrophosphorylase [Xylella fastidiosa Temecula1]
gi|47606158|sp|Q87AX6|THIE_XYLFT RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|28057677|gb|AAO29525.1| thiamin-phosphate pyrophosphorylase [Xylella fastidiosa Temecula1]
Length = 234
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ + GG+T +NI +++AGA+LL V S ++ K I+ K
Sbjct: 175 ELLRQTTHLGVPRVAIGGLTPKNIAPIIEAGAELLAVISGIYSAKNPITALKA 227
>gi|119356293|ref|YP_910937.1| modD protein [Chlorobium phaeobacteroides DSM 266]
gi|119353642|gb|ABL64513.1| modD protein [Chlorobium phaeobacteroides DSM 266]
Length = 281
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ + GG+ + N G D+LV+ S +F + +I+
Sbjct: 236 PGVKVSAAGGINADNAAIYASTGVDILVLSSVYFGKPSDIAAL 278
>gi|182677276|ref|YP_001831422.1| modD protein [Beijerinckia indica subsp. indica ATCC 9039]
gi|182633159|gb|ACB93933.1| modD protein [Beijerinckia indica subsp. indica ATCC 9039]
Length = 286
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ GG+ + N AGAD+LV S ++ + +++
Sbjct: 240 IAAAGGINAENAGLYAAAGADVLVTSSPYWGKPRDVA 276
>gi|167835741|ref|ZP_02462624.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia thailandensis
MSMB43]
Length = 295
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N + PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 199 AAFALNADVPVQIEVETLDQLRTALAH----GAQSVLLDNFTLDMMRDAVRITEGRAV-L 253
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 254 EVSGGVNFDTVRAIAETGVD 273
>gi|194367059|ref|YP_002029669.1| thiamine-phosphate pyrophosphorylase [Stenotrophomonas maltophilia
R551-3]
gi|194349863|gb|ACF52986.1| thiamine-phosphate pyrophosphorylase [Stenotrophomonas maltophilia
R551-3]
Length = 208
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 175 DGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKR 212
GG+T N+ ++ AGAD + VV SS F + ++ +
Sbjct: 165 IGGLTPDNVGPIIDAGADLVAVV-SSVFAAEDPVATQRA 202
>gi|114331525|ref|YP_747747.1| thiamine-phosphate pyrophosphorylase [Nitrosomonas eutropha C91]
gi|122313679|sp|Q0AFV0|THIE_NITEC RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|114308539|gb|ABI59782.1| thiamine-phosphate diphosphorylase [Nitrosomonas eutropha C91]
Length = 212
Score = 39.8 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I A +I + GG+ N ++L+ G D + V + F+ + S A+ + L
Sbjct: 152 IHLLDAAKKTLNIPIVAIGGINLDNAEALIARGCDAVAVSQALFSAQDIQSAARHFSKL 210
>gi|298491101|ref|YP_003721278.1| nicotinate-nucleotide pyrophosphorylase ['Nostoc azollae' 0708]
gi|298233019|gb|ADI64155.1| nicotinate-nucleotide pyrophosphorylase ['Nostoc azollae' 0708]
Length = 290
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 44/107 (41%), Gaps = 17/107 (15%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPET-PVAILEDVID-EIDMILI--MTVNPGFGG 147
H ++ I ++ I + + I ET + + ++ + D+I++ MTV+
Sbjct: 176 HIVAAGDIGEAITQIRSRIPYP-LTIEVETESLEQVHSALEYQADIIMLDNMTVDI---- 230
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
++ + + + + +E G V+ I+ + + G D +
Sbjct: 231 ------MAEAVQLIRQMDSR--VKIEASGNVSLETIRGVAETGVDYI 269
>gi|295402385|ref|ZP_06812339.1| 3-hexulose-6-phosphate synthase [Geobacillus thermoglucosidasius
C56-YS93]
gi|312112066|ref|YP_003990382.1| 3-hexulose-6-phosphate synthase [Geobacillus sp. Y4.1MC1]
gi|294975548|gb|EFG51172.1| 3-hexulose-6-phosphate synthase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217167|gb|ADP75771.1| 3-hexulose-6-phosphate synthase [Geobacillus sp. Y4.1MC1]
Length = 211
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 123 VAILEDVIDEIDMILI--MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V LE+ E+D + + V+ G+ Q + ++++ + K ++ ++ + GG+
Sbjct: 113 VKNLEERAKEVDEFGVDYICVHTGYDLQAVGKNSLEDLATIKRVV--KNAKTAIAGGIKL 170
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +++A DL++VG NQ+ + + A + +
Sbjct: 171 NTLPEVIKAKPDLIIVGGGITNQEDKRAVAAEMKKM 206
>gi|21227317|ref|NP_633239.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Methanosarcina mazei Go1]
gi|20905670|gb|AAM30911.1| hexulose-6-phosphate synthase [Methanosarcina mazei Go1]
Length = 409
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 29/62 (46%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
+ K + L V GG+ S + V+AGA +++VG + AK++ S +
Sbjct: 138 EISEKVGVQLAVAGGLDSESAAQAVRAGARIVIVGGNITRSDNVTEAAKKIRKSVDSPES 197
Query: 223 ID 224
+D
Sbjct: 198 VD 199
>gi|17230727|ref|NP_487275.1| indole-3-glycerol-phosphate synthase [Nostoc sp. PCC 7120]
gi|17132330|dbj|BAB74934.1| indole-3-glycerol phosphate synthase [Nostoc sp. PCC 7120]
Length = 281
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
ADF + GA + V D F +++R++R C I
Sbjct: 82 ADF-DPVAIAKAYERGGAACLSV-VTDSSF---FHGSFEILRAIRQRVPLPILCKEFIID 136
Query: 74 IDS-HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
++ A A ++ + ++ LR IH +G VA++ + + +D+
Sbjct: 137 PCQIYLARAAGADAVLLIAAILTDRELKDFLRIIHFLGMNALVAVHSLAELDRILK-LDD 195
Query: 133 IDMILIMTVNPGFGGQQLIESTIP------KIRQAKALIGKRSISLEVDGGVTSRN-IKS 185
+ +I I Q L + T + ++ + I++ + G+ + +
Sbjct: 196 VRLIEI-------NNQSLQDFTTDISTTQNLLTARRSHLQNLGITVVSESGLYTHTDLSL 248
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ +AGA+ ++VG S ++ + L
Sbjct: 249 VAEAGANAVIVGESLIKEQDIEQAVRYL 276
>gi|313202461|ref|YP_004041119.1| thiamine-phosphate pyrophosphorylase [Methylovorus sp. MP688]
gi|312441777|gb|ADQ85883.1| thiamine-phosphate pyrophosphorylase [Methylovorus sp. MP688]
Length = 208
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 175 DGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKRLNDL 216
GG+T N V AGAD+L V+GS + A++ + L
Sbjct: 160 IGGITLDNAPQAVAAGADMLAVIGS-LWGSSDIRRTAQQFSRL 201
>gi|300309771|ref|YP_003773863.1| thiamine monophosphate synthase [Herbaspirillum seropedicae SmR1]
gi|124483548|emb|CAM32647.1| Thiamine monophosphate synthase protein [Herbaspirillum
seropedicae]
gi|300072556|gb|ADJ61955.1| thiamine monophosphate synthase protein [Herbaspirillum seropedicae
SmR1]
Length = 210
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 145 FGGQQLIESTIPK--IRQAKALIGKRSISL----EVDGGVTSRNIKSLVQAGADLLVVGS 198
FGG S + K R A +I + V GG+T N LV+ GAD++ V S
Sbjct: 133 FGG--FYPSRVKKYDFRTAPEIIAHSKREIPLPVVVIGGITLENAPPLVEQGADMVAVIS 190
Query: 199 SFFNQKGEISYAKRLNDL 216
S + E + L DL
Sbjct: 191 SVYLVPVEERKTRELADL 208
>gi|303272731|ref|XP_003055727.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463701|gb|EEH60979.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 39.8 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L+V GGVT+ L+ AGA ++V S F G + +RL+ L +
Sbjct: 135 LQVGGGVTAETAAPLLDAGASHVIVTSYVFR-DGMVDQ-ERLDALVAA 180
>gi|331238637|ref|XP_003331973.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309310963|gb|EFP87554.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 263
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF-NQKGEISYAKRLND-LKK 218
A+ + ++V GG+ N + + AGA ++V S F +QK + + ++L + + K
Sbjct: 69 ARRGLDSWRGQIQVGGGINLENAQDWLDAGASKVIVTSYLFPDQKLDTNRLRKLTERIGK 128
Query: 219 SALAID 224
+ L ID
Sbjct: 129 NQLVID 134
>gi|40795504|gb|AAR91478.1| putative 3-hexulose-6-phosphate synthase [Geobacillus sp. M10EXG]
Length = 211
Score = 39.8 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 123 VAILEDVIDEIDMILI--MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
V LE+ E+D + + V+ G+ Q + ++++ + K ++ ++ + GG+
Sbjct: 113 VKNLEERAKEVDEFGVDYICVHTGYDLQAVGKNSLEDLATIKRVV--KNAKTAIAGGIKL 170
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +++A DL++VG NQ+ + + A + +
Sbjct: 171 NTLPEVIKAKPDLIIVGGGITNQEDKRAVAAEMKKM 206
>gi|309777947|ref|ZP_07672889.1| hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914236|gb|EFP60034.1| hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
3_1_53]
Length = 211
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 9/137 (6%)
Query: 82 ADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGV-AINPETPVAILEDVIDE-IDMILI 138
A+ G DI T + I+ +++ K V N + + +DVI D + +
Sbjct: 74 ANFGADIFTVLGAAGNDTIQGAIQAAKERHIKVLVDMCNVDNYLERAKDVIAWGADYVCV 133
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
T QQ + +I + A IGK + V GG+ L Q ++++VGS
Sbjct: 134 HT---PTDEQQKVSY-HKRIGEISAQIGKEHCA--VAGGINPDKCVYLKQIQPEIIIVGS 187
Query: 199 SFFNQKGEISYAKRLND 215
+++ +
Sbjct: 188 YITGSDDPKKSIEQIRE 204
>gi|20093802|ref|NP_613649.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
(ProFAR) isomerase [Methanopyrus kandleri AV19]
gi|22095765|sp|Q8TYD6|HIS4_METKA RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|19886719|gb|AAM01579.1| Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
(ProFAR) isomerase [Methanopyrus kandleri AV19]
Length = 242
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
+ PV + I ++ V+ G+ I +I + ++V
Sbjct: 28 TFESDDPVETAHQWSEFFPWIHVVDVDA-ARGEGDNSDIIGRI------CEEVDAKVQVG 80
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
GG+ ++ + L++ GAD L+VG+ F K + S
Sbjct: 81 GGIRSAERAEELIELGADRLIVGTVAFTDKDDFSKI 116
>gi|71900192|ref|ZP_00682331.1| Thiamine monophosphate synthase [Xylella fastidiosa Ann-1]
gi|71730025|gb|EAO32117.1| Thiamine monophosphate synthase [Xylella fastidiosa Ann-1]
Length = 204
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ + GG+T +NI +++AGA+LL V S ++ K I+ K
Sbjct: 145 ELLRQTTHFGVPRVAIGGLTPKNIAPIIEAGAELLAVISGIYSAKNPITALKA 197
>gi|328954241|ref|YP_004371575.1| Thiamine-phosphate pyrophosphorylase [Desulfobacca acetoxidans DSM
11109]
gi|328454565|gb|AEB10394.1| Thiamine-phosphate pyrophosphorylase [Desulfobacca acetoxidans DSM
11109]
Length = 200
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 20/48 (41%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ L GG+ N +++ AGAD + S+ + + L
Sbjct: 151 NLPLIAIGGINQDNAPAVIAAGADGICAISAVVTRPDVQAAISGFQRL 198
>gi|319788234|ref|YP_004147709.1| thiamine-phosphate pyrophosphorylase [Pseudoxanthomonas suwonensis
11-1]
gi|317466746|gb|ADV28478.1| thiamine-phosphate pyrophosphorylase [Pseudoxanthomonas suwonensis
11-1]
Length = 213
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 175 DGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKRLN 214
GG+T N ++LV++GADLL VVG F ++
Sbjct: 166 IGGITPDNGRALVESGADLLAVVG-GVFEAPDPLAAVAAYR 205
>gi|261406058|ref|YP_003242299.1| phosphoribosylanthranilate isomerase [Paenibacillus sp. Y412MC10]
gi|261282521|gb|ACX64492.1| Phosphoribosylanthranilate isomerase [Paenibacillus sp. Y412MC10]
Length = 224
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 10/134 (7%)
Query: 70 MISSID--SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP----V 123
++ + D ++ + D++ H + SP R ++ + V+I + P +
Sbjct: 65 VLVNPDLSELAELLQETALDVVQLHGQESPQFCREVKERFPVSVFKAVSIGSDRPEAERL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN- 182
+ L+ ID +LI T +P +GG +I + ++ I L V GG+ N
Sbjct: 125 SALDSYAGCIDGLLIDTYDPVYGGGSGKTFAWDRIPAYQQWAERQGIPLFVAGGLDPDNV 184
Query: 183 ---IKSLVQAGADL 193
I G D+
Sbjct: 185 AHLIGQYAPYGVDV 198
>gi|254238818|ref|ZP_04932141.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
C3719]
gi|126170749|gb|EAZ56260.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
C3719]
Length = 282
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 173 HIAACGGIDRAIAEARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 221 ELSLDDMRTAVALTAGRA-KLEASGGINESTLRNIAETGVDYISIGT 266
>gi|319648209|ref|ZP_08002426.1| thiamine-phosphate pyrophosphorylase [Bacillus sp. BT1B_CT2]
gi|317389844|gb|EFV70654.1| thiamine-phosphate pyrophosphorylase [Bacillus sp. BT1B_CT2]
Length = 224
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 161 AKALIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
I ++ I + V GG+T N +++AGAD + V S+ A+ ++ +
Sbjct: 157 LIQEIRRQGIGIPVVGIGGITVENCVPVIEAGADGISVISAISKAADPKQAAEAFSEKVQ 216
Query: 219 SA 220
+A
Sbjct: 217 AA 218
>gi|222529624|ref|YP_002573506.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor bescii
DSM 6725]
gi|222456471|gb|ACM60733.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor bescii
DSM 6725]
Length = 488
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
D ++ + A D+I T H S + +++ I + V D
Sbjct: 229 KDTDDRVDALVKAQVDVIVVDTAHG-HSKGVIETVKRIKSRYPHIQVVAGNIATAEAARD 287
Query: 129 VIDEIDMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I+ + + + PG G + I I + + I + DGG+
Sbjct: 288 LIEAGADCVKVGIGPGSICTTRVVAGIGV--PQITAIMDVAEVAKEYGIPVIADGGIRYS 345
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGAD++++GS
Sbjct: 346 GDITKALAAGADVVMIGS 363
>gi|189030333|sp|Q0VSP5|THIE_ALCBS RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
Length = 217
Score = 39.4 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYA 210
+++ +RQA + +++ GGV N L+ AGA + V+ + F Q +
Sbjct: 145 PASLALLRQACQQFHQPVVAI---GGVNPDNAPQLINAGAVSVAVI-HALFGQTDTDAIE 200
Query: 211 KRLNDL 216
L
Sbjct: 201 AAARQL 206
>gi|254000502|ref|YP_003052565.1| thiamine-phosphate pyrophosphorylase [Methylovorus sp. SIP3-4]
gi|253987181|gb|ACT52038.1| thiamine-phosphate pyrophosphorylase [Methylovorus sp. SIP3-4]
Length = 208
Score = 39.4 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 175 DGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKRLNDL 216
GG+T N V AGAD+L V+GS + A++ + L
Sbjct: 160 IGGITLDNAPQAVAAGADMLAVIGS-LWGSSDIRHTAQQFSRL 201
>gi|311067824|ref|YP_003972747.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
S-methyltransferase [Bacillus atrophaeus 1942]
gi|310868341|gb|ADP31816.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
S-methyltransferase [Bacillus atrophaeus 1942]
Length = 762
Score = 39.4 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 25/169 (14%)
Query: 19 LGEEISNITKAGAKQIHFD---------VMDGCFVPNISFGADVIRSLRSYS--DSVFDC 67
L +E+ + AG + I D + + + +++ A+ R S D+
Sbjct: 585 LRKEVKALEDAGIQIIQVDEPALREGLPLKENDWEEYLTWAAEAFRLTTSAVKNDTQIHT 644
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGV---AINPETP-V 123
H+ S+ + ++ I D D+IT E S L + G+ + +P V
Sbjct: 645 HMCYSNFEDIVDTINDLDADVITI--EHSRSHGGFLDYLKDHPYLKGLGLGVYDIHSPRV 702
Query: 124 AILEDVIDEIDMILIMT------VNPGFGGQQLIESTIPKIRQAKALIG 166
E++ ID L + VNP G + I K ++
Sbjct: 703 PPTEEIYKIIDEALTVCPTDRFWVNPDCGLKT--RHQEETIAALKNMVE 749
>gi|330506568|ref|YP_004382996.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanosaeta concilii GP-6]
gi|328927376|gb|AEB67178.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanosaeta concilii GP-6]
Length = 241
Score = 39.4 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 116 AINPETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
+ + P+A E IDE D + I+ ++ G++ S + +I + + + ++V
Sbjct: 28 VVALDNPLAQAERWIDEGADHLHIIDLDGAIQGKRANASILAQI------VKELDVYIQV 81
Query: 175 DGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
GG+ + + +++ G D +++G++ I+ + ++ +A+D
Sbjct: 82 GGGIRSEEEARDVLRLGVDRVILGTAALKDPDMIAQLAEEHGRERIMVALD 132
>gi|150403451|ref|YP_001330745.1| modD protein [Methanococcus maripaludis C7]
gi|150034481|gb|ABR66594.1| modD protein [Methanococcus maripaludis C7]
Length = 283
Score = 39.4 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
T+ K +A I ++++ GG+T +NI+ + G +++V S +F + +I
Sbjct: 221 PKTVEKFVKAAKEIN-PNVTVVAAGGITIQNIEEYAKTGVEVIVTSSLYFGKAADIKAI 278
>gi|114767398|ref|ZP_01446201.1| thiamine-phosphate pyrophosphorylase [Pelagibaca bermudensis
HTCC2601]
gi|114540515|gb|EAU43593.1| thiamine-phosphate pyrophosphorylase [Roseovarius sp. HTCC2601]
Length = 202
Score = 39.4 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ + K+R+ K L+G + + GG+T + L +AGAD
Sbjct: 132 KWAPQGLEKVRRWKRLVGDKPL--VGIGGLTPERLPGLFEAGAD 173
>gi|119485217|ref|ZP_01619602.1| nicotinate-nucleotide pyrophosphorylase [Lyngbya sp. PCC 8106]
gi|119457445|gb|EAW38570.1| nicotinate-nucleotide pyrophosphorylase [Lyngbya sp. PCC 8106]
Length = 299
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+++ + KIR I +E G +T I+S+ + G D +
Sbjct: 226 KMMSEAVEKIRA-----ENDRIKIEASGNITLETIRSVAETGVDYI 266
>gi|148259398|ref|YP_001233525.1| thiamine-phosphate pyrophosphorylase [Acidiphilium cryptum JF-5]
gi|146401079|gb|ABQ29606.1| thiamine-phosphate diphosphorylase [Acidiphilium cryptum JF-5]
Length = 206
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKR 212
+ + + GG+T N LV+AGAD L VVG + + + R
Sbjct: 145 VEILRWWSELMEVPCVAIGGITPGNAAPLVEAGADFLAVVG-AVWQHPDGPAAGVR 199
>gi|306842507|ref|ZP_07475158.1| thiamine-phosphate pyrophosphorylase [Brucella sp. BO2]
gi|306287363|gb|EFM58843.1| thiamine-phosphate pyrophosphorylase [Brucella sp. BO2]
Length = 203
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 21/183 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G K + V D V + IR+ R + DC L+++
Sbjct: 13 SADW------LERMVPLGIKLVQLRVKDKADVQLRA----EIRAARDICAAH-DCQLIVN 61
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + + GC+ I E L I A G K GV+ + E + V
Sbjct: 62 D---YWKLALEEGCNFIHLGQEDLDGAD--LDAIRAGGLKLGVSSHDEAELDRALSVRP- 115
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + + P + + E +P++ + KA IG I L GG++ + AGA
Sbjct: 116 -DYIALGPIYPTILKKMKWHEQGLPRLGEWKARIG--DIPLVGIGGLSVERAPGVFAAGA 172
Query: 192 DLL 194
D++
Sbjct: 173 DIV 175
>gi|75909343|ref|YP_323639.1| nicotinate-nucleotide pyrophosphorylase [Anabaena variabilis ATCC
29413]
gi|75703068|gb|ABA22744.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Anabaena
variabilis ATCC 29413]
Length = 287
Score = 39.4 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETP-VAILEDVIDEIDMILIMTVNPGFGGQQL 150
H ++ I ++ I A T + I ET + +++ ++ I+++ P
Sbjct: 175 HIAAAGGIGEAITRIRAQIPYT-LTIEVETETIEQVKEALEYKADIIMLDNMP------- 226
Query: 151 IESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLL 194
+ +RQA LI + + +E G VT I+++ + G D +
Sbjct: 227 ----VDLMRQAVQLIRQQDNGVKIEASGNVTLETIRAVAETGVDYI 268
>gi|4096309|gb|AAC99834.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa]
Length = 283
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 174 HIAACGGIDRAIAEARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 221
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 222 ELSLDDMRTAVALTAGRA-KLEASGGINESTLRNIAETGVDYISIGT 267
>gi|307111107|gb|EFN59342.1| hypothetical protein CHLNCDRAFT_137774 [Chlorella variabilis]
Length = 355
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GGVT+ N + ++AGA ++V S F + +RL DL K
Sbjct: 119 GGVTAENAQEYLEAGASHVIVTSYVFREGRLEE--ERLADLVK 159
>gi|268324022|emb|CBH37610.1| conserved hypothetical protein, demethylmenaquinone
methyltransferase family and orotidine 5'-phosphate
decarboxylase / HUMPS family [uncultured archaeon]
Length = 430
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 42/214 (19%), Positives = 76/214 (35%), Gaps = 25/214 (11%)
Query: 13 AADFSRLGEEI---SNITKAGAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDCH 68
A D L + + GA + P I S G + IR+LR V
Sbjct: 9 ALDLLELKRAVEIGKESIEGGADWLEV------GTPLIKSEGMNAIRTLRDAFPDVTIVA 62
Query: 69 LM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVA-----INPET 121
M + + + + A +G +++ + I + K GVA IN E
Sbjct: 63 DMKTMDTGAIEVEMAAKSGASVVSI--LAVADNAVIDEAIKSARKY-GVAVMADIINAED 119
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
PV +++ + + V+ G Q + + K + + + L V GGV +
Sbjct: 120 PVRRAKELEGLG--VDYVCVHVGIDQQM---QGMDTLNLLKKVSAELNTPLAVAGGVDAE 174
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V GAD+++VG + ++ +
Sbjct: 175 LASEAVSLGADVIIVGGNITRSAEVKESTAKIRE 208
>gi|268325414|emb|CBH39002.1| conserved hypothetical protein, orotidine 5'-phosphate
decarboxylase and demethylmenaquinone methyltransferase
family [uncultured archaeon]
Length = 430
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 17/210 (8%)
Query: 13 AADFSRLGEEI---SNITKAGAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDCH 68
A D L + + GA + P I S G + IR+LR V
Sbjct: 9 ALDLLELKRAVEIGKESIEGGADWLEV------GTPLIKSEGMNAIRTLRDAFPDVTIVA 62
Query: 69 LM--ISSIDSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAI 125
M + + + + A +G +++ + I ++++ G V +
Sbjct: 63 DMKTMDTGAIEVEMAAKSGASVVSILAVADNAVIDEAIKSGRKYGVAVMVDLINVEDPER 122
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
++ + + + V+ G Q + + K + + + L V GGV +
Sbjct: 123 RAKELEGLG-VDYVCVHVGIDQQM---QGMDTLNLLKKVSAELNTPLAVAGGVDAELASE 178
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V GAD+++VG + ++ +
Sbjct: 179 AVSLGADVIIVGGNITRSAKVKESTAKIRE 208
>gi|254831850|ref|ZP_05236505.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes
10403S]
Length = 214
Score = 39.4 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+I + GG+ N ++ AGAD + V S+ + S K+L +
Sbjct: 163 TIPIVGIGGINETNSAEVLAAGADGVSVISAITRSEDCQSVIKQLKN 209
>gi|297564847|ref|YP_003683819.1| thiamine-phosphate pyrophosphorylase [Meiothermus silvanus DSM
9946]
gi|296849296|gb|ADH62311.1| thiamine-phosphate pyrophosphorylase [Meiothermus silvanus DSM
9946]
Length = 208
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRL 213
+ +R A + ++ GG+ + +++AGA + VV + + AKRL
Sbjct: 145 LEYVRWAAHNLQLPWFAI---GGIDEHTLPRVLEAGARRVAVV-RAILDAPDPEEAAKRL 200
Query: 214 N 214
Sbjct: 201 R 201
>gi|292654125|ref|YP_003534023.1| inosine-5-monophosphate dehydrogenase [Haloferax volcanii DS2]
gi|291369777|gb|ADE02005.1| inosine-5-monophosphate dehydrogenase [Haloferax volcanii DS2]
Length = 362
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 21/149 (14%)
Query: 79 NIIADAGCDIITF-----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+ DAG D I H E +R G + P +ED+ +
Sbjct: 107 EALLDAGADAIVMDIAHGHMELCLDAVERIRDEFDPEIVAGNVVTPA----AVEDLWEAG 162
Query: 134 DMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKS 185
+ + V PG G + + + I + DGG+ TS +
Sbjct: 163 AGCVKVGVGPGSHCTTREVAGAGY--PQLTAVSECAERAHDLGIHVMADGGIRTSGDAAK 220
Query: 186 LVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ AGAD +++GS F + + + +
Sbjct: 221 ALMAGADTVMMGS--FFAGTDEAPGRVVE 247
>gi|307353069|ref|YP_003894120.1| tryptophan synthase subunit alpha [Methanoplanus petrolearius DSM
11571]
gi|307156302|gb|ADN35682.1| tryptophan synthase, alpha subunit [Methanoplanus petrolearius DSM
11571]
Length = 261
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDG- 176
T ++ + + + G GQ ++ + + I +AK I + V G
Sbjct: 150 TTSEERMKKIAGKAKGFAYLISALGTTGQRDKIPDEALDLIARAKKTFD---IPVVV-GF 205
Query: 177 GVT-SRNIKSLVQAGADLLVVGSSFFNQKGE 206
G++ N K ++ AGAD +VVGS+ + GE
Sbjct: 206 GISGPENAKKMIDAGADGVVVGSAIVSAVGE 236
>gi|260912893|ref|ZP_05919378.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Pasteurella
dagmatis ATCC 43325]
gi|260632883|gb|EEX51049.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Pasteurella
dagmatis ATCC 43325]
Length = 224
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA-GADLLVVGSSFFNQK 204
G+ E I K+++ + + + + GG+ +I A + G + +K
Sbjct: 153 AGKGWTEDDIEKMKRL----EELGLEISITGGIIPEDIHLFKDIRNAKAFIAGRALVGEK 208
Query: 205 GEISYAKRLNDLKK 218
G+ + ++ K
Sbjct: 209 GKATADAIRAEIAK 222
>gi|288573191|ref|ZP_06391548.1| Quinolinate phosphoribosyl transferase [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568932|gb|EFC90489.1| Quinolinate phosphoribosyl transferase [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 346
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 158 IRQAKALIGKRSI---SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+++ + + K S+ GG+ I+ L QAG D VGS + + +
Sbjct: 262 VKELRWRLDKAGFPEVSIVASGGLNPDRIRVLSQAGVDSFGVGSYI-SNPSPMDMTMDIK 320
Query: 215 D 215
+
Sbjct: 321 E 321
>gi|89894149|ref|YP_517636.1| hypothetical protein DSY1403 [Desulfitobacterium hafniense Y51]
gi|122483233|sp|Q24XQ0|THIE_DESHY RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|89333597|dbj|BAE83192.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 207
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + K + S+ + GG+ + N++++ + G D + V S+ +Q+ + AK L DL
Sbjct: 146 LAKLKEIKAGVSLPVVGIGGIGAANLRAVKETGIDGVSVISAILSQEDPCAAAKGLMDL 204
>gi|326402620|ref|YP_004282701.1| thiamine-phosphate pyrophosphorylase [Acidiphilium multivorum
AIU301]
gi|325049481|dbj|BAJ79819.1| thiamine-phosphate pyrophosphorylase [Acidiphilium multivorum
AIU301]
Length = 206
Score = 39.4 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKR 212
+ + + GG+T N LV+AGAD L VVG + + + R
Sbjct: 145 VEILRWWSELMEVPCVAIGGITPGNAAPLVEAGADFLAVVG-AVWQHPDGPAAGVR 199
>gi|158428198|pdb|2DZV|A Chain A, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(D146a) From A Hyperthermophile, Pyrococcus Furiosus
gi|158428199|pdb|2DZV|B Chain B, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(D146a) From A Hyperthermophile, Pyrococcus Furiosus
Length = 248
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
+++ R +S + + + + + +G D I H +
Sbjct: 69 FWIVKEFRRHSSTPI-VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IAREEGIKTVFLAAPNTPAERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
+L
Sbjct: 243 EEL 245
>gi|325528996|gb|EGD06014.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia sp. TJI49]
Length = 293
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N PV + + + ++D L G + T+ +R+A + R++ L
Sbjct: 197 AAFALNAGVPVQVEVETLAQLDTALAH----GAQSVLIDNFTLDMMREAVRVAAGRAL-L 251
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 252 EVSGGVNLDTVRAFAETGVD 271
>gi|312829066|emb|CBX33908.1| 3-hexulose-6-phosphate synthase (HPS) (HUMPS)
(D-arabino-3-hexulose-6-phosphate formaldehyde lyase)
[Staphylococcus aureus subsp. aureus ECT-R 2]
Length = 210
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAVEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAESPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK+
Sbjct: 184 VIVGGGIANADDPVEAAKQCRA 205
>gi|209968799|gb|ACJ02773.1| indole-3-glycerol phosphate lyase IGL2 [Lamium galeobdolon]
Length = 309
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA-KALIGKRSISLE 173
+ P TP ++++++ + + + G G S K++ + G+ + ++
Sbjct: 195 LLTTPTTPSDRMKEIVEAAEGFIYLVSTVGVTGT--RTSVSDKVQSLLHEIKGETNKAVA 252
Query: 174 VDG-GVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKK 218
V G G++ +K + + GAD ++VGS+ GE + L +L+K
Sbjct: 253 V-GFGISKPEQVKQVAEWGADGVIVGSAMVKILGEAKTPEEGLKELEK 299
>gi|56751115|ref|YP_171816.1| tryptophan synthase subunit alpha [Synechococcus elongatus PCC
6301]
gi|81299222|ref|YP_399430.1| tryptophan synthase subunit alpha [Synechococcus elongatus PCC
7942]
gi|73622054|sp|Q5N324|TRPA_SYNP6 RecName: Full=Tryptophan synthase alpha chain
gi|123557436|sp|Q31R76|TRPA_SYNE7 RecName: Full=Tryptophan synthase alpha chain
gi|56686074|dbj|BAD79296.1| tryptophan synthase alpha chain [Synechococcus elongatus PCC 6301]
gi|81168103|gb|ABB56443.1| tryptophan synthase, alpha chain [Synechococcus elongatus PCC 7942]
Length = 266
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 67/179 (37%), Gaps = 18/179 (10%)
Query: 54 IRSLRSYSDSVFDCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
++ +RS + + ++ ++ IA AG + + +R
Sbjct: 85 LKDVRSQIKAPI-VLFTYCNPILNRGFEAFLDQIAAAGANGLVVPDLPLEESQRLSEVAA 143
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPKIRQAKALI 165
G + I P + + + + + + G G Q + +++ +
Sbjct: 144 ERGIDLILLIAPTSSADRIAAISKQARGFIYLVSVTGVTGMRQGMQSRVADLLQEIRQGT 203
Query: 166 GKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFN---QKGEISYAKRLNDLKKS 219
K + V G G++ + + + GAD ++VGS+F N ++G A +L+++
Sbjct: 204 DKP---IGV-GFGISGAEQARQVRDWGADGVIVGSAFVNRLQEQGVEGVATLCRELRQA 258
>gi|49474045|ref|YP_032087.1| thiamine-phosphate pyrophosphorylase [Bartonella quintana str.
Toulouse]
gi|49239549|emb|CAF25906.1| Thiamine-phosphate pyrophosphorylase [Bartonella quintana str.
Toulouse]
Length = 201
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 5/142 (3%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMG 110
+I + ++ D I+ H I D C+ I E + L I G
Sbjct: 36 PKIISQHIKRAKNICDKLGTQLIINDHWTIAIDEKCNFIHLGQEDLSNAD--LPAIRKNG 93
Query: 111 KKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI 170
+ G++ + E + I V + L + + + KI++ K IG +
Sbjct: 94 IRFGLSTHDEHELDIALSVHPNY-IALGPIYPTILKEMKWMPQGLEKIKKWKKRIGA--L 150
Query: 171 SLEVDGGVTSRNIKSLVQAGAD 192
L GG+T +++AGA+
Sbjct: 151 PLIGIGGLTPERATDVLKAGAN 172
>gi|320355121|ref|YP_004196460.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Desulfobulbus propionicus DSM 2032]
gi|320123623|gb|ADW19169.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Desulfobulbus propionicus DSM 2032]
Length = 278
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 12/106 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I ++R + A IN E L V + + G G L
Sbjct: 168 HIAACGSITEAVRRVRARVPH---TINVEVETDTLAQVEECLAC--------GVGVIMLD 216
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ +RQA LI R+I +E GGV ++ + + G D++ VG
Sbjct: 217 NMDLATMRQAVNLIDGRAI-IEASGGVNLDTVRGIAETGVDIISVG 261
>gi|91226677|ref|ZP_01261366.1| thiamine-phosphate diphosphorylase [Vibrio alginolyticus 12G01]
gi|91188974|gb|EAS75257.1| thiamine-phosphate diphosphorylase [Vibrio alginolyticus 12G01]
Length = 204
Score = 39.4 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 63/203 (31%), Gaps = 16/203 (7%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + L + + G + G V A ++ + ++ + +
Sbjct: 15 DLATLKRVVRKAVEGGVTMVQVREKHG-DVRAFIERAQAVKDILKDTNVPLIINDRVD-- 71
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV-IDEI 133
D H S R + K G++I E +A + + ID I
Sbjct: 72 -------VALAVDADGVHLGQSDMPATIARELIGPNKILGLSIENEEQLAEADSLPIDYI 124
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
+ I ++ I K + S+ + GG+ NI L G
Sbjct: 125 GLSAIFATPTKTNTKKFWG-----IDGLKMALETTSLPIVAIGGINESNIPQLSATGVHG 179
Query: 194 LVVGSSFFNQKGEISYAKRLNDL 216
L + S+ + + + ++ L L
Sbjct: 180 LALVSAICHAEDPKAASEYLLGL 202
>gi|325473434|gb|EGC76629.1| dihydroorotate dehydrogenase/oxidoreductase [Treponema denticola
F0402]
Length = 592
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 10/127 (7%)
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D + I ++ I + G AIN P +E +
Sbjct: 172 PDCTVPIFVKLTPNV--------EDIGAIAAAVIEAGADGITAINTVGPKVYIEPHSGKP 223
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ + G G + + I Q + +G+ I + GGV T LV+AGAD
Sbjct: 224 ILQNKLGGKGGMSGAWVFPRALECIGQIRKAVGE-GIPIIGMGGVMTGAQAAELVRAGAD 282
Query: 193 LLVVGSS 199
++ +GS+
Sbjct: 283 IIGIGSA 289
>gi|124486469|ref|YP_001031085.1| hypothetical protein Mlab_1657 [Methanocorpusculum labreanum Z]
gi|124364010|gb|ABN07818.1| thiamine-phosphate pyrophosphorylase [Methanocorpusculum labreanum
Z]
Length = 210
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I + + ++ I + GG+ NI +++AG D + V S+ + A+ L
Sbjct: 146 ISAVRQAV-EKDIPVLGIGGINCDNIPEVIKAGLDGICVISAVVSAPDITKAAEDL 200
>gi|57866142|ref|YP_187812.1| hexulose-6-phosphate synthase [Staphylococcus epidermidis RP62A]
gi|242241909|ref|ZP_04796354.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis W23144]
gi|251809993|ref|ZP_04824466.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282874972|ref|ZP_06283847.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis SK135]
gi|293367953|ref|ZP_06614590.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|81675362|sp|Q5HRH7|HPS_STAEQ RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|57636800|gb|AAW53588.1| hexulose-6-phosphate synthase, putative [Staphylococcus epidermidis
RP62A]
gi|242234687|gb|EES36999.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis W23144]
gi|251806536|gb|EES59193.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281296300|gb|EFA88819.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis SK135]
gi|291317910|gb|EFE58319.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329729471|gb|EGG65874.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis VCU144]
gi|329735936|gb|EGG72212.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis VCU028]
gi|329736930|gb|EGG73192.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis VCU045]
Length = 210
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL++VG
Sbjct: 131 IAVHTGYDLQAEGKSPLDSLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAEDPDLVIVGG 188
Query: 199 SFFNQKGEISYAKRLND 215
N + AK+
Sbjct: 189 GIANADDPVEAAKQCRA 205
>gi|313114477|ref|ZP_07799993.1| thiamine-phosphate pyrophosphorylase [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623206|gb|EFQ06645.1| thiamine-phosphate pyrophosphorylase [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 211
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 5/160 (3%)
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDI-ITFHPESSPHIRRSLRTIHAMGKKTGVAINPE 120
+ H + + + DI I H E H+ + + + G +
Sbjct: 53 KEAVEIHALCQRYG--VPFFVNDNVDIAIRCHAE-GVHVGQEDMAAAQVRARVGEGMMIG 109
Query: 121 TPVAILEDVIDEIDM-ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
V +E+ ++ + + V F + + KA+ I + GG+
Sbjct: 110 VSVHSVEEALEAVKHGADCLGVGAAFATHTKTDVDVLPHETLKAICDAVDIPVVAIGGIH 169
Query: 180 SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
NI L G D + + S+ F + K L L +
Sbjct: 170 KENILQLKGTGVDGVALVSAIFAADDIETECKGLKALSEQ 209
>gi|269926654|ref|YP_003323277.1| nicotinate-nucleotide pyrophosphorylase [Thermobaculum terrenum
ATCC BAA-798]
gi|269790314|gb|ACZ42455.1| nicotinate-nucleotide pyrophosphorylase [Thermobaculum terrenum
ATCC BAA-798]
Length = 287
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDEI----DMILIMTVNPGFGGQQLIESTIPKIR 159
+ I A + + E V ++ + + + D+IL+ + + + +
Sbjct: 179 QAIRAARSRATHTLRIEVEVEDMDQLHEALRAGADVILL---------DNMSPAQVKEAT 229
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
Q R I +EV GG+ N++ +AG D++ VG
Sbjct: 230 QLIKSFDNR-IIVEVSGGINLSNVRDYAEAGVDIISVG 266
>gi|57642211|ref|YP_184689.1| orotidine 5'-phosphate decarboxylase [Thermococcus kodakarensis
KOD1]
gi|73913711|sp|Q5JDB0|PYRF_PYRKO RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
gi|57160535|dbj|BAD86465.1| orotidine-5'-phosphate decarboxylase [Thermococcus kodakarensis
KOD1]
Length = 213
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 25/179 (13%)
Query: 47 ISFGADVIRSLRSYSDSVFDCHLMISSIDS----HINIIADAGCDIITFH-------PES 95
I G +I L+ + L ++ I + + + +AG D I H E+
Sbjct: 40 IGSGLKIITELKQVTGLPIIADLKLADIPNTNRLIASKVFEAGADYIIAHGFVGRDSVEA 99
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
+ +++ + I P T L ++ +E++ G
Sbjct: 100 VMELGKTIIVVEMSHPGAKEFIQPVT--DKLIELANELE-------PFGVIAPATRP--- 147
Query: 156 PKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ ++ + +R I + G G ++AGAD ++VG S + A+RL
Sbjct: 148 ERVSYIRSRL-ERGIRILTPGVGAQGGKASDAIKAGADYVIVGRSIYGSNNPREAARRL 205
>gi|94494965|ref|ZP_01301546.1| keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
[Sphingomonas sp. SKA58]
gi|94425231|gb|EAT10251.1| keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
[Sphingomonas sp. SKA58]
Length = 210
Score = 39.4 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GG+ N+ V AGAD +GS+ + + A ++ + ++
Sbjct: 160 GGINPGNMGPWVAAGADGFGLGSALYK---PGATAAQVREAAQA 200
>gi|289192234|ref|YP_003458175.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanocaldococcus sp. FS406-22]
gi|288938684|gb|ADC69439.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanocaldococcus sp. FS406-22]
Length = 237
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 77/200 (38%), Gaps = 26/200 (13%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI 80
E GA+ +H +D F + D+I+++ + + I +++
Sbjct: 34 EVAKKFVDEGAEYLHIIDLDAAFGTGNN--RDIIKNIIKEVNVPVEVGGGIRNLE-IAKE 90
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKK-TGVAINPE---------------TPVA 124
+ G D + ++ + +GK +A+ + TP+
Sbjct: 91 LIGLGVDRVIVGTKAILEPKFIDDLNKEIGKDKIVLAVECKDGKVVIKGWKEKVDKTPLE 150
Query: 125 ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNI 183
++++ D++ +L V+ + + + K LI K I + GG+T +I
Sbjct: 151 VIKEFEDKVGYVLFTNVDVEGLLKGIN------VEIIKELIEKTDIPIIYSGGITTLEDI 204
Query: 184 KSLVQAGADLLVVGSSFFNQ 203
K+L + G +V+GS+ +
Sbjct: 205 KALKELGIYGVVIGSALYKG 224
>gi|255321642|ref|ZP_05362799.1| ModD protein [Campylobacter showae RM3277]
gi|255301290|gb|EET80550.1| ModD protein [Campylobacter showae RM3277]
Length = 280
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + + + I + +L GG+ +N++ AGAD LV S+ + Q
Sbjct: 216 KFTPEAVKRAVDLRDKIA-PNAALVASGGINLKNVREFASAGADALVT-SAMYTQ 268
>gi|192292461|ref|YP_001993066.1| thiamine-phosphate diphosphorylase [Rhodopseudomonas palustris
TIE-1]
gi|192286210|gb|ACF02591.1| Thiamine-phosphate diphosphorylase [Rhodopseudomonas palustris
TIE-1]
Length = 202
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H L I G G++ + + + + E D I + + P
Sbjct: 74 HLHLGQEDLAEADLYEIKNAGLTLGLSTHDDAELET--ALAAEPDYIALGPIFPTTLKSM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ IPKI + K +G ++ L GG+ + + AGAD + V S +
Sbjct: 132 RFAPQGIPKITEWKKRVG--NMPLVAIGGIKLEQAEEIFAAGADSIAVVSDVTQNPDPDA 189
Query: 209 YAKRLNDL 216
+ D
Sbjct: 190 RVRAWLDF 197
>gi|153832745|ref|ZP_01985412.1| thiamine-phosphate pyrophosphorylase [Vibrio harveyi HY01]
gi|148871090|gb|EDL69974.1| thiamine-phosphate pyrophosphorylase [Vibrio harveyi HY01]
Length = 204
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 22/206 (10%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + L + + G + G V A ++ + +D + +
Sbjct: 15 DLATLKRVVRKAVEGGVTMVQVREKHG-DVRAFIERAQAVKDILKDTDVPLIINDRVD-- 71
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV-IDEI 133
D H S R + K G++I E +A + + ID I
Sbjct: 72 -------VALAVDADGVHLGQSDMPATVARELIGPYKILGLSIENEQQLAEADSLPIDYI 124
Query: 134 DMILIMTVNPGFGGQQLIESTIPK---IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+ I ++ K I K + S+ + GG+ NI L G
Sbjct: 125 GLSAIFATP--------TKTNTKKHWGIDGLKMALETTSLPIVAIGGINESNIPQLSATG 176
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDL 216
L + S+ + + + ++ L +L
Sbjct: 177 VHGLALVSAICHAEDPKAASEYLLEL 202
>gi|15920421|ref|NP_376090.1| hexulose-6-phosphate synthase [Sulfolobus tokodaii str. 7]
gi|15621203|dbj|BAB65199.1| 223aa long hypothetical hexulose-6-phosphate synthase [Sulfolobus
tokodaii str. 7]
Length = 223
Score = 39.4 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 38/83 (45%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ ++ G Q+ TI ++ + + + + V GG+ NI ++ ++ V
Sbjct: 140 VDIIGLHVGLDVQKKRGITISDLKNEIKKVSELGVIVSVAGGLNKNNIVDIIDLPINIYV 199
Query: 196 VGSSFFNQKGEISYAKRLNDLKK 218
VG + K + AK++ + K
Sbjct: 200 VGGAITRAKNPLEEAKQIVKIIK 222
>gi|319406912|emb|CBI80547.1| thiamine-phosphate pyrophosphorylase [Bartonella sp. 1-1C]
Length = 201
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 20/203 (9%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G K I + D + I+ ++ D L+I+
Sbjct: 12 SADW------VERLVPFGIKLIQLRIKD----KDTETIIQHIKRAKNICDKFK-VQLVIN 60
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ I D CD I E + I G K G++ + E + I + E
Sbjct: 61 D---YWKIAIDEKCDFIHLGQEDLKSAD--ILAIRKSGIKFGLSTHDEHELDISLSISPE 115
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ L + + KI+Q + IG S+ L GG+T S+++ GA+
Sbjct: 116 Y-IALGPIYPTILKKMKWAPQGLEKIKQWRKKIG--SLPLIGIGGLTPERAMSILKVGAN 172
Query: 193 -LLVVGSSFFNQKGEISYAKRLN 214
VV N+K E + +
Sbjct: 173 SAAVVTDIILNKKPEERVQQWIK 195
>gi|104783745|ref|YP_610243.1| thiamine-phosphate pyrophosphorylase [Pseudomonas entomophila L48]
gi|122401729|sp|Q1I4H6|THIE_PSEE4 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|95112732|emb|CAK17460.1| thiamin-phosphate pyrophosphorylase ThiE [Pseudomonas entomophila
L48]
Length = 207
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ + QA+A + + + V GG+T N LV GADLL V F +R
Sbjct: 142 SLELLEQARARVK---LPIAVIGGITLDNAAPLVAHGADLLAVIHGLFGADSAQEVTRRA 198
Query: 214 NDL 216
Sbjct: 199 RAF 201
>gi|154936970|dbj|BAF75380.1| fusion protein of hexulose-6-phosphate synthase and
6-phospho-3-hexuloisomerase [synthetic construct]
Length = 406
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
V GGV I ++ +AGA++ V G + +
Sbjct: 163 VAGGVKVATIPAVQKAGAEVAVAGGAIYG 191
>gi|150019298|ref|YP_001311552.1| thiamine-phosphate pyrophosphorylase [Clostridium beijerinckii
NCIMB 8052]
gi|189030315|sp|A6M1W6|THIE_CLOB8 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|149905763|gb|ABR36596.1| thiamine-phosphate pyrophosphorylase [Clostridium beijerinckii
NCIMB 8052]
Length = 209
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + + + SI + V GG+ +K G D L + S+ ++ + AK L +
Sbjct: 147 MNELRKIRENVSIPIVVIGGINKDRVKDFKGIGIDGLAIVSAIIAKEDITTAAKELKN 204
>gi|147918875|ref|YP_687399.1| orotidine 5'-phosphate decarboxylase [uncultured methanogenic
archaeon RC-I]
gi|110622795|emb|CAJ38073.1| orotidine 5\'-phosphate decarboxylase [uncultured methanogenic
archaeon RC-I]
Length = 216
Score = 39.4 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 85/218 (38%), Gaps = 21/218 (9%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
I+A D + E ++ K G D + + +S G +I L+ Y++ + D +
Sbjct: 10 IIAMDVTDRKEALAIAEKLGGA---VDAIKVNYPIVLSCGLGIIGELKQYTNVIADFKVA 66
Query: 71 -ISSIDSHI-NIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETP--VAI 125
I + + I AG D I + ++ + GK+ V P +
Sbjct: 67 DIPNTNKLICEETFKAGADAIICQGFTGKDSVQACVDAAKQYGKEVFVVTEMSHPGALDF 126
Query: 126 LE-DVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA---LIGKRSISLEVDGGVTSR 181
L+ ++ +D+ N G + IRQ +A I + + GG
Sbjct: 127 LQGHALELVDLARAAGAN-GIIAPATRPERLAMIRQ-RAGDMKILSPGVGTQ--GG---- 178
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKK 218
+ S ++AGAD ++VG S +N AK + L++
Sbjct: 179 DAASAIKAGADFVIVGRSIYNAPDPYQAAKNFIEQLRR 216
>gi|292492710|ref|YP_003528149.1| nicotinate-nucleotide pyrophosphorylase [Nitrosococcus halophilus
Nc4]
gi|291581305|gb|ADE15762.1| nicotinate-nucleotide pyrophosphorylase [Nitrosococcus halophilus
Nc4]
Length = 277
Score = 39.0 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 116 AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
+P P+ I + +DE+ L G L +P + +A L +R + LE
Sbjct: 182 TYSPNLPIEIEVENLDELQQAL----TAGADILLLDNFDLPALSEAVRLNQQR-VKLEAS 236
Query: 176 GGVTSRNIKSLVQAGADLLVVGS 198
GG+T N++ + + G D + VG+
Sbjct: 237 GGITLENVRQVAETGVDYISVGT 259
>gi|187479485|ref|YP_787510.1| thiamine-phosphate pyrophosphorylase [Bordetella avium 197N]
gi|123513775|sp|Q2KUS6|THIE_BORA1 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|115424072|emb|CAJ50625.1| thiamine-phosphate pyrophosphorylase [Bordetella avium 197N]
Length = 216
Score = 39.0 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
Q +A G+ ++ GG+T N + AGAD + V + F
Sbjct: 155 AQVRA-CGEPRPAVVAIGGITPANAGLVAAAGADSIAVITGLFEAPD 200
>gi|298674879|ref|YP_003726629.1| nicotinate phosphoribosyltransferase [Methanohalobium evestigatum
Z-7303]
gi|298287867|gb|ADI73833.1| Nicotinate phosphoribosyltransferase [Methanohalobium evestigatum
Z-7303]
Length = 400
Score = 39.0 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 151 IESTIPKIRQ-AKALIGKRSISLEVD--GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ KI Q K + R + + GG+ I L +AG D VG++ + I
Sbjct: 247 RRGNLKKIAQEIKWELKCRGVDARIIASGGINEYTIPELRKAGVDGFGVGTTI-SNADTI 305
Query: 208 SYAKRLNDL 216
++ + ++
Sbjct: 306 DFSMDIVEM 314
>gi|269940143|emb|CBI48519.1| putative hexulose-6-phosphate synthase [Staphylococcus aureus
subsp. aureus TW20]
Length = 210
Score = 39.0 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 4/142 (2%)
Query: 75 DSHINIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D ++ G D+IT + I+ ++ H K+ V + + +DE+
Sbjct: 67 DYEVSQAIKFGADVITILGVAEDASIKAAIEEAHKNNKQLLVDMIAVQDLEKRAKELDEM 126
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
I V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL
Sbjct: 127 GADYI-AVHTGYDLQAEGQSPLESLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAESPDL 183
Query: 194 LVVGSSFFNQKGEISYAKRLND 215
++VG N + AK
Sbjct: 184 VIVGGGIANADDPVEAAKLCRA 205
>gi|303272733|ref|XP_003055728.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463702|gb|EEH60980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 39.0 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L+V GGVT+ L+ AGA ++V S F G + +RL+ L +
Sbjct: 135 LQVGGGVTAETAAPLLDAGASHVIVTSYVFR-DGMVDQ-ERLDALVAA 180
>gi|158428190|pdb|2DZP|A Chain A, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(D17n) From A Hyperthermophile, Pyrococcus Furiosus
gi|158428191|pdb|2DZP|B Chain B, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(D17n) From A Hyperthermophile, Pyrococcus Furiosus
Length = 248
Score = 39.0 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
+++ R +S + + + + + +G D I H +
Sbjct: 69 FWIVKEFRRHSSTPI-VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IAREEGIKTVFLAAPNTPDERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
+L
Sbjct: 243 EEL 245
>gi|161528745|ref|YP_001582571.1| nicotinate-nucleotide pyrophosphorylase [Nitrosopumilus maritimus
SCM1]
gi|160340046|gb|ABX13133.1| nicotinate-nucleotide pyrophosphorylase [Nitrosopumilus maritimus
SCM1]
Length = 272
Score = 39.0 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 150 LIESTIPK-IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ I K I K ++ + LE GG+ S+NI Q G D++ VGS
Sbjct: 209 FTPNQIRKTIAVLKNQKLRKKVLLEASGGINSKNISKYGQTGVDIISVGS 258
>gi|121604940|ref|YP_982269.1| modD protein [Polaromonas naphthalenivorans CJ2]
gi|120593909|gb|ABM37348.1| modD protein [Polaromonas naphthalenivorans CJ2]
Length = 279
Score = 39.0 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 10/101 (9%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
+ +++ + + + + P L + D++ + ++ +
Sbjct: 168 TDTPAQTIAQLRRTQPEKKIIVEVGDPGEALRWALAGADVLQL---------EKFTPEAV 218
Query: 156 PKIRQAKALIGKRS-ISLEVDGGVTSRNIKSLVQAGADLLV 195
R+A S L GGV + N + V AGADLLV
Sbjct: 219 ATCREALQAFPAASRPLLAAAGGVRAGNASAYVAAGADLLV 259
>gi|295109009|emb|CBL22962.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase, eukaryotic type [Ruminococcus obeum A2-162]
Length = 255
Score = 39.0 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
G + + + I+ KA L++ GGV N ++AGA ++V S F
Sbjct: 61 GKDSEYYEATRVQAIKALKAYPKG----LQIGGGVCPGNAAEYLEAGASHVIVTSYVFKD 116
Query: 204 KGEISYAKRLNDLKKS 219
G + L ++++
Sbjct: 117 GGLS--WENLQKMEEA 130
>gi|269121388|ref|YP_003309565.1| hypothetical protein Sterm_2790 [Sebaldella termitidis ATCC 33386]
gi|268615266|gb|ACZ09634.1| conserved hypothetical protein [Sebaldella termitidis ATCC 33386]
Length = 283
Score = 39.0 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 62/162 (38%), Gaps = 26/162 (16%)
Query: 80 IIADAGCDIITFHPESSPHIRRSLRTIHAMG-------------KKTGVAINPETPVAIL 126
IA +G D + H + ++ ++ H G G++ TP +
Sbjct: 127 KIAMSGADGVHIHKSTLEDLKDVVKYAHKYGLLVDAYIGHPDDLHTFGISAR--TPEEVA 184
Query: 127 EDVIDE----IDMILIMTVNP--GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS 180
E + +DMI +MT G ++ ++ + + ++ +GG+
Sbjct: 185 EAAKEMEKIGVDMIGLMTGMSYEGTAAGEIHPVIKERLSALVSSVKVPTL---AEGGIND 241
Query: 181 RNIKSLVQAGADLLVVGSSFFN--QKGEISYAKRLNDLKKSA 220
N + G ++LV+G+S N + + K+ LKK A
Sbjct: 242 TNYVAFKDTGVNILVIGTSIDNVVSEAATNVVKKFLSLKKQA 283
>gi|302531321|ref|ZP_07283663.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Streptomyces sp. AA4]
gi|302440216|gb|EFL12032.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Streptomyces sp. AA4]
Length = 253
Score = 39.0 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
G+ + L +AGAD+ V+ + N + R+ L + ALA+
Sbjct: 24 GIGAATALRLAEAGADV-VLTYAV-NAEQAADVVDRIKALGRRALAV 68
>gi|3257573|dbj|BAA30256.1| 161aa long hypothetical thiamine biosynthetic bifunctional protein
[Pyrococcus horikoshii OT3]
Length = 161
Score = 39.0 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 26/64 (40%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I + ++ I + GG+ N++ ++ G D + V S+ + + L +
Sbjct: 97 IEGLREIVNAVKIPVVAIGGINLENVREVLLTGVDGIAVVSAVMGTEDVKRATEGLRRII 156
Query: 218 KSAL 221
+ L
Sbjct: 157 EEVL 160
>gi|317046914|ref|YP_004114562.1| nicotinate-nucleotide pyrophosphorylase [Pantoea sp. At-9b]
gi|316948531|gb|ADU68006.1| nicotinate-nucleotide pyrophosphorylase [Pantoea sp. At-9b]
Length = 298
Score = 39.0 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
+ P+ PV + + +DE+ L G L T+ +R+A AL +R++ LEV G
Sbjct: 205 LQPDVPVEVEVETLDELQAAL----AAGADIVMLDNFTLEMMRKAAALTQRRAL-LEVSG 259
Query: 177 GVTSRNIKSLVQAGADLLVVG 197
VT+ + + Q G D + VG
Sbjct: 260 NVTAATLPQIAQTGVDYVSVG 280
>gi|253731072|ref|ZP_04865237.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253725199|gb|EES93928.1| thiamin phosphate synthase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 213
Score = 39.0 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I I K + + + + GG+ + N+ +V+AGA+ + V S+ +
Sbjct: 147 IPVGPKMIATFKEMNPQ--LPIVAIGGINTNNVAPIVEAGANGISVISAISKSENIEKTV 204
Query: 211 KRLNDL 216
R D
Sbjct: 205 NRFKDF 210
>gi|206557949|sp|B1L6Q8|GGGPS_KORCO RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
Length = 244
Score = 39.0 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 161 AKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + + ++ + V GG+ + ++ +AGA+++VVG+ + ++ + + + KS
Sbjct: 185 VRLVRERTNLGIIVGGGLRSPELVRERAEAGANVIVVGTHIEEGRDALASVREMKEALKS 244
>gi|269958338|ref|YP_003328125.1| nicotinate-nucleotide pyrophosphorylase [Anaplasma centrale str.
Israel]
gi|269848167|gb|ACZ48811.1| nicotinate-nucleotide pyrophosphorylase [Anaplasma centrale str.
Israel]
Length = 272
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 16/123 (13%)
Query: 79 NIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
D I H S I + I + + ++ + + E + + I++
Sbjct: 147 ESYRKGLYDGIMIKDNHIVSCGSITECVSRIRRKLGNAFITVECDSKIQVEESLKNSINL 206
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
I++ I +IR + +IG S +EV GGV + + + + G D +
Sbjct: 207 IML------------DNMNIQEIRDSVGMIG-NSAMIEVSGGVDIESAEEVARLGVDYIS 253
Query: 196 VGS 198
VGS
Sbjct: 254 VGS 256
>gi|242398455|ref|YP_002993879.1| Thiamine-phosphate pyrophosphorylase [Thermococcus sibiricus MM
739]
gi|242264848|gb|ACS89530.1| Thiamine-phosphate pyrophosphorylase [Thermococcus sibiricus MM
739]
Length = 197
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 26/61 (42%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
K ++ I + GG+ +N + +++ G D + + S+ + + + + +
Sbjct: 136 LKRIVESVKIPVVAIGGINHKNARDVLKTGVDGIAIISAIMGAEDVKRATEEMRKIIEEV 195
Query: 221 L 221
L
Sbjct: 196 L 196
>gi|261416626|ref|YP_003250309.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261373082|gb|ACX75827.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302325346|gb|ADL24547.1| 1-(5-phosphoribosyl)-5-
((5'-phosphoribosylamino)methylideneamino)imidazole-4-
carboxamide isomerase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 260
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AK + ++V GG+ ++N K + AGA ++V S F RL++L K
Sbjct: 67 AAKDALSAYPGGMQVGGGINAQNAKEYIDAGASHVIVTSWIF--PDGKLDRSRLDELVK 123
>gi|148240201|ref|YP_001225588.1| N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus sp. WH
7803]
gi|147848740|emb|CAK24291.1| Putative N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus
sp. WH 7803]
Length = 229
Score = 39.0 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
Q + ++ + + ++ + +GG+ + + + + AGAD +VVG++
Sbjct: 158 QDSKPPGLHLLKPLRDGLPAQTGLIC-EGGIASPQTARDAISAGADAVVVGTAI 210
>gi|218296890|ref|ZP_03497585.1| thiamine-phosphate pyrophosphorylase [Thermus aquaticus Y51MC23]
gi|218242770|gb|EED09305.1| thiamine-phosphate pyrophosphorylase [Thermus aquaticus Y51MC23]
Length = 206
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 158 IRQAKALIGKRS-ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+R A +G R ++ GG+ N+ +++AGA +VV + + A+ +
Sbjct: 145 VRWAAENLGNRPWFAI---GGIDLANLDQVLEAGARRIVVVRAILDAPDPEGAARAFRE 200
>gi|313639630|gb|EFS04432.1| thiamine-phosphate pyrophosphorylase [Listeria seeligeri FSL
S4-171]
Length = 214
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I + GG+ N ++ AGAD + V S+ + + L +L+ +
Sbjct: 164 IPIVGIGGINEANCAEVLVAGADGVSVISAITRLDNCQATIQNLKNLRSA 213
>gi|313634969|gb|EFS01357.1| thiamine-phosphate pyrophosphorylase [Listeria seeligeri FSL
N1-067]
Length = 214
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
I + GG+ N ++ AGAD + V S+ + + L +L+ +
Sbjct: 164 IPIVGIGGINEANCAEVLVAGADGVSVISAITRLDNCQATIQNLKNLRSA 213
>gi|126666902|ref|ZP_01737878.1| tryptophan synthase subunit alpha [Marinobacter sp. ELB17]
gi|126628618|gb|EAZ99239.1| tryptophan synthase subunit alpha [Marinobacter sp. ELB17]
Length = 276
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 64/212 (30%), Gaps = 30/212 (14%)
Query: 15 DFSRLGEEISNITKAGAKQIHF-----DVM-DGC-----------FVPNISFGADVIRSL 57
D+ E + + +AGA I D M DG N ++R
Sbjct: 31 DYQHSAEILKGLPEAGADIIELGMPFTDPMADGAPIQLASQRALAGGHNTIKTLQMVREF 90
Query: 58 RSYSDSVFDCHLMISSI------DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
R ++ + + + ++ A +G D + H G
Sbjct: 91 REHNQHTPIVLMGYYNPIYCYGVERFLDDAAASGVDGMIVVDLPPEHDNELCVPAREAGI 150
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI-RQAKALIGKRSI 170
P T A L V+ L + G G T K+ ++ + ++
Sbjct: 151 HFIRLATPTTDAARLPGVLVNTSGFLYYVSSTGVTGSA--APTAEKVEKELARIREHTNL 208
Query: 171 SLEVDGGVTSRNIKSL--VQAGADLLVVGSSF 200
+ V G R + AD +VVGS+
Sbjct: 209 PVAV--GFGIRTAPQAERIARFADAVVVGSAL 238
>gi|329765625|ref|ZP_08257200.1| nicotinate-nucleotide pyrophosphorylase [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137895|gb|EGG42156.1| nicotinate-nucleotide pyrophosphorylase [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 272
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 150 LIESTIPK-IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
S I K I+ K + + LE GG+ ++NI G D + VGS
Sbjct: 209 FSPSQIRKTIQTLKEQKLRNKVLLEASGGINAKNIAKYGGTGVDTISVGS 258
>gi|82751693|ref|YP_417434.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus RF122]
gi|123548241|sp|Q2YUL2|THIE_STAAB RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|82657224|emb|CAI81664.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus RF122]
Length = 213
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K + + + + GG+ + N+ +V+AGA+ + V S+ + R D
Sbjct: 152 EMIATFKEMNPQ--LPIVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKD 209
Query: 216 L 216
Sbjct: 210 F 210
>gi|18978077|ref|NP_579434.1| tryptophan synthase subunit alpha [Pyrococcus furiosus DSM 3638]
gi|24638311|sp|Q8U094|TRPA_PYRFU RecName: Full=Tryptophan synthase alpha chain
gi|12084524|pdb|1GEQ|A Chain A, Entropic Stabilization Of The Tryptophan Synthase
A-Subunit From A Hyperthermophile, Pyrococcus Furiosus:
X-Ray Analysis And Calorimetry
gi|12084525|pdb|1GEQ|B Chain B, Entropic Stabilization Of The Tryptophan Synthase
A-Subunit From A Hyperthermophile, Pyrococcus Furiosus:
X-Ray Analysis And Calorimetry
gi|73535402|pdb|1WDW|A Chain A, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
gi|73535404|pdb|1WDW|C Chain C, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
gi|73535406|pdb|1WDW|E Chain E, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
gi|73535408|pdb|1WDW|G Chain G, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
gi|73535410|pdb|1WDW|I Chain I, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
gi|73535412|pdb|1WDW|K Chain K, Structural Basis Of Mutual Activation Of The Tryptophan
Synthase A2b2 Complex From A Hyperthermophile,
Pyrococcus Furiosus
gi|18893868|gb|AAL81829.1| tryptophan synthetase alpha subunit [Pyrococcus furiosus DSM 3638]
gi|22775325|dbj|BAC11856.1| tryptophan synthase alpha subunit [Pyrococcus furiosus]
Length = 248
Score = 39.0 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
+++ R +S + + + + + +G D I H +
Sbjct: 69 FWIVKEFRRHSSTPI-VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IAREEGIKTVFLAAPNTPDERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
+L
Sbjct: 243 EEL 245
>gi|257460176|ref|ZP_05625280.1| putative thiamine-phosphate pyrophosphorylase [Campylobacter
gracilis RM3268]
gi|257442617|gb|EEV17756.1| putative thiamine-phosphate pyrophosphorylase [Campylobacter
gracilis RM3268]
Length = 455
Score = 39.0 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEI 207
L+ + IR + G + GG+T RN S+++AGAD + V+ S+ +
Sbjct: 392 GLMPKGLNLIRAVR---GFYGGEIYALGGITPRNFASVLRAGADRIAVMSSAM-AARDAS 447
Query: 208 SYAKRLND 215
+ ++
Sbjct: 448 DFIRKFKK 455
>gi|254429008|ref|ZP_05042715.1| thiamine-phosphate pyrophosphorylase [Alcanivorax sp. DG881]
gi|196195177|gb|EDX90136.1| thiamine-phosphate pyrophosphorylase [Alcanivorax sp. DG881]
Length = 226
Score = 39.0 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEIS 208
+++ +RQA + +++ GGV N L+ AGA + V+ + F S
Sbjct: 151 PASLAVLRQACQQFHQPVVAI---GGVNPDNAPQLIDAGAVSVAVI-HALFGHTDTAS 204
>gi|167718464|ref|ZP_02401700.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
DM98]
Length = 231
Score = 39.0 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N + PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 135 AAFALNADVPVQIEVETLDQLRTALAH----GARSVLLDNFTLDMMRDAVRVTEGRAV-L 189
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 190 EVSGGVNFDTVRAIAETGVD 209
>gi|154503373|ref|ZP_02040433.1| hypothetical protein RUMGNA_01197 [Ruminococcus gnavus ATCC 29149]
gi|153796040|gb|EDN78460.1| hypothetical protein RUMGNA_01197 [Ruminococcus gnavus ATCC 29149]
Length = 211
Score = 39.0 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 8/133 (6%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H +R I K GV+ T ++ D D + + V P
Sbjct: 86 VHVGQDDMPAWKVREILGEDKIIGVSAQ--TVEQAIKAEKDGADYLGVGAVFPTSSKADA 143
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+E + + I + GG+++ N+ L G D + V S+ F Q A
Sbjct: 144 VEVEH---ATLRDICVAVQIPVVAIGGISAENVSQLAGTGIDGIAVISAIFAQDFPKLAA 200
Query: 211 KRLNDLKKSALAI 223
+ +LKK AI
Sbjct: 201 E---ELKKKVEAI 210
>gi|312127330|ref|YP_003992204.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
hydrothermalis 108]
gi|312793833|ref|YP_004026756.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|311777349|gb|ADQ06835.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
hydrothermalis 108]
gi|312180973|gb|ADQ41143.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 488
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
D ++ + A D+I T H S + +++ I + V D
Sbjct: 229 KDTDERVDALVKAQVDVIVVDTAHG-HSKGVIETVKRIKSRYPHIQVVAGNIATAEAARD 287
Query: 129 VIDEIDMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I+ + + + PG G + I I + + I + DGG+
Sbjct: 288 LIEAGADCVKVGIGPGSICTTRVVAGIGV--PQITAIMDVAEVAKEYGIPVIADGGIRYS 345
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGAD++++GS
Sbjct: 346 GDITKALAAGADVVMIGS 363
>gi|294850293|ref|ZP_06791027.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9754]
gi|294822805|gb|EFG39240.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9754]
Length = 295
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALIMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|283471309|emb|CAQ50520.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus ST398]
Length = 213
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 130 IDEIDMILIMTVNP-GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ +D I + + P I K + + + + GG+ + N+ +V+
Sbjct: 125 LTHVDYIGVGPIYPTPSKNDAHTPVGPEMIATFKEMNPQ--LPIVAIGGINTSNVAPIVE 182
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLNDL 216
AGA+ + V S+ + R D
Sbjct: 183 AGANGISVISAISKSENIEKTVNRFKDF 210
>gi|170291004|ref|YP_001737820.1| geranylgeranylglyceryl phosphate synthase-like protein [Candidatus
Korarchaeum cryptofilum OPF8]
gi|170175084|gb|ACB08137.1| geranylgeranylglyceryl phosphate synthase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 238
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 161 AKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + + ++ + V GG+ + ++ +AGA+++VVG+ + ++ + + + KS
Sbjct: 179 VRLVRERTNLGIIVGGGLRSPELVRERAEAGANVIVVGTHIEEGRDALASVREMKEALKS 238
>gi|23100261|ref|NP_693728.1| 3-hexulose-6-phosphate synthase [Oceanobacillus iheyensis HTE831]
gi|22778493|dbj|BAC14762.1| 3-hexulose-6-phosphate synthase [Oceanobacillus iheyensis HTE831]
Length = 210
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 78 INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
++ + AG DIIT + I+ ++ KK V + + +DE+ +
Sbjct: 70 VSQASQAGADIITILGTAEDQSIQGAVEEAKKHNKKILVDMIAVKDIETRAKELDELG-V 128
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
+ V+ G+ Q + +++ + K+++ + ++ GG+ + +++ DL++V
Sbjct: 129 DYICVHTGYDLQAVGKNSFEDLATIKSVVKQAQTAIA--GGIKQETLPEVIKHQPDLIIV 186
Query: 197 GSSFFNQKGEISYAKRLNDL 216
G +++ + + A+ + +L
Sbjct: 187 GGGITSKEDKQTVAREMKEL 206
>gi|312622159|ref|YP_004023772.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202626|gb|ADQ45953.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 488
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
D ++ + A D+I T H S + +++ I + V D
Sbjct: 229 RDTDERVDALVKAQVDVIVVDTAHG-HSKGVIETVKRIKSRYPHIQVVAGNIATAEAARD 287
Query: 129 VIDEIDMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I+ + + + PG G + I I + + I + DGG+
Sbjct: 288 LIEAGADCVKVGIGPGSICTTRVVAGIGV--PQITAIMDVAEVAKEYGIPVIADGGIRYS 345
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGAD++++GS
Sbjct: 346 GDITKALAAGADVVMIGS 363
>gi|291519828|emb|CBK75049.1| Dioxygenases related to 2-nitropropane dioxygenase [Butyrivibrio
fibrisolvens 16/4]
Length = 206
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 17/83 (20%)
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIP-KIRQAKALIGKRSISLEVDGG-----VT--- 179
V + M +I +VN GF +++ IR K I K E+ GG V
Sbjct: 30 VAKQGCMGVISSVNIGFKEPDFLQNPFEANIRALKEHIRKAK---EIAGGNGLIGVNIMV 86
Query: 180 -----SRNIKSLVQAGADLLVVG 197
+K+ + AGAD ++ G
Sbjct: 87 AVSHYEETVKAAISAGADAIISG 109
>gi|197301570|ref|ZP_03166643.1| hypothetical protein RUMLAC_00296 [Ruminococcus lactaris ATCC
29176]
gi|197299300|gb|EDY33827.1| hypothetical protein RUMLAC_00296 [Ruminococcus lactaris ATCC
29176]
Length = 769
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKR 212
T+ K + A+ I + GG+T+ NIK L G D + VV S F K + +R
Sbjct: 443 TLAK-EELCAICEAVEIPVVAIGGITAENIKELTGTGIDGVAVV-SGLFAAKDKPEMVRR 500
>gi|288818185|ref|YP_003432533.1| orotidine 5'-phosphate decarboxylase [Hydrogenobacter thermophilus
TK-6]
gi|288787585|dbj|BAI69332.1| orotidine 5'-phosphate decarboxylase [Hydrogenobacter thermophilus
TK-6]
gi|308751786|gb|ADO45269.1| orotidine 5'-phosphate decarboxylase [Hydrogenobacter thermophilus
TK-6]
Length = 223
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 23/155 (14%)
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV------IDEIDM 135
A+ D +T H R K G+ + + L ++ + +
Sbjct: 75 AELSPDYLTVHALCGRTALREASQAKGRIKLLGITLLTSLDESFLRELGIEASTDELVYK 134
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGK------RSISLEVDGGVTSRNIK----- 184
+ M + G G + + ++ K I + +S+ G I+
Sbjct: 135 LASMCIQEGLDG---VVCSGREVSSLKKGIRREFLAVVPGVSI---GSAKRDQIRSVSLQ 188
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+++GAD++V+G K IS + + L +S
Sbjct: 189 EAIESGADIIVIGRDIVEDKDPISKTESILKLLES 223
>gi|227509034|ref|ZP_03939083.1| 3-hexulose-6-phosphate synthase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191511|gb|EEI71578.1| 3-hexulose-6-phosphate synthase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 207
Score = 39.0 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 171 SLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ V GG+ K L + G A+ ++VGS ++ AK+ ++ K
Sbjct: 159 RISVAGGIDLETAKKLAEQGIAESVIVGSKIIKTDDPVASAKQFMEVIK 207
>gi|260583787|ref|ZP_05851535.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Granulicatella
elegans ATCC 700633]
gi|260158413|gb|EEW93481.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Granulicatella
elegans ATCC 700633]
Length = 212
Score = 39.0 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 21/143 (14%)
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE-----IDM 135
DAG D +T + ++ T+ A K+ G + E + ++ ID
Sbjct: 76 CKDAGADWMTVICCA------TIPTMKAAQKEIG-TLQVELYGDWTFEQAEQWREAGIDQ 128
Query: 136 ILIM-TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL- 193
++ + + F G ES + KI++ + + GG+T +K + + G D+
Sbjct: 129 VIYHQSRDALFAGATWTESDLNKIKRLIEM----GFKVSATGGLTKDTLK-VFE-GIDIY 182
Query: 194 -LVVGSSFFNQKGEISYAKRLND 215
+ G + + A+ +
Sbjct: 183 TFIAGRGIYATENPAQSAREFKE 205
>gi|21673289|ref|NP_661354.1| molybdenum transport system protein ModD [Chlorobium tepidum TLS]
gi|21646379|gb|AAM71696.1| molybdenum transport system protein modD [Chlorobium tepidum TLS]
Length = 285
Score = 39.0 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
GG+ N + G D++V+ S +F + +IS
Sbjct: 244 GGINGENAAAYAATGIDIIVLSSVYFGKPADIS 276
>gi|299535701|ref|ZP_07049022.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Lysinibacillus fusiformis ZC1]
gi|298728901|gb|EFI69455.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Lysinibacillus fusiformis ZC1]
Length = 255
Score = 39.0 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDL 216
L++ GG+T+ N + + AGA ++V S F + + +++ KRLN L
Sbjct: 78 LQIGGGITADNAQKYIDAGASHVIVTSYIFHDGQLDLARLKRLNQL 123
>gi|187735948|ref|YP_001878060.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Akkermansia muciniphila ATCC BAA-835]
gi|187426000|gb|ACD05279.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Akkermansia muciniphila ATCC BAA-835]
Length = 261
Score = 39.0 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
A+ + L+V GG+T N + + AGA ++V S F+ +G + RL DL +
Sbjct: 67 AAREALAAWPGGLQVGGGMTPENAEEWISAGASHVIVTSCLFDAEGTLR-MDRLKDLVSA 125
Query: 220 ALA 222
A
Sbjct: 126 VGA 128
>gi|116753513|ref|YP_842631.1| tryptophan synthase, alpha subunit [Methanosaeta thermophila PT]
gi|116664964|gb|ABK13991.1| tryptophan synthase, alpha chain [Methanosaeta thermophila PT]
Length = 267
Score = 39.0 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 34/226 (15%)
Query: 21 EEISNITKAGAKQI-----HFD-VMDGCFVP-----------NISFGADVIRSLRSYSDS 63
+ I +AGA + H D + DG + N DV +
Sbjct: 34 DIADRIVRAGADVLELGLPHSDPIADGPVIQAASQRAIAAGMNTDLYFDVASKIDGVPKV 93
Query: 64 VFDCHLMISS--IDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINP 119
+ M+ ++ ++ +G + P R + + H + +A P
Sbjct: 94 FMGYYNMVYRRGLERFVSDCRASGICGMIVPDLPMEESRPLREVTSRHGVDLINMIA--P 151
Query: 120 ETPVAILEDVIDEIDMILIMTVNPGFGGQQ--LIESTIPKIRQAKALIGKRSISLEVDGG 177
TP + D++ + + G G + L EST + + +I + G
Sbjct: 152 NTPDKRIRDIVSTSSGFVYLVARSGVTGARADLQESTKHLVERVPPVIPRAVGF-----G 206
Query: 178 VT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISYAKRLNDLKKS 219
V+ + LV+AGAD ++VGS+ +K + +KK+
Sbjct: 207 VSRPEHAAELVRAGADGVIVGSACVDLIGKKELDQLEDLIRSMKKA 252
>gi|312877453|ref|ZP_07737416.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795774|gb|EFR12140.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 488
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
D ++ + A D+I T H S + +++ I + V D
Sbjct: 229 KDTDERVDALVKAQVDVIVVDTAHG-HSKGVIETVKRIKSRYPHIQVVAGNIATAEAARD 287
Query: 129 VIDEIDMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I+ + + + PG G + I I + + I + DGG+
Sbjct: 288 LIEAGADCVKVGIGPGSICTTRVVAGIGV--PQITAIMDVAEVAKEYGIPVIADGGIRYS 345
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGAD++++GS
Sbjct: 346 GDITKALAAGADVVMIGS 363
>gi|148642977|ref|YP_001273490.1| thiamine monophosphate synthase, ThiE [Methanobrevibacter smithii
ATCC 35061]
gi|166987549|sp|A5ULP4|THIE_METS3 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|148551994|gb|ABQ87122.1| thiamine monophosphate synthase, ThiE [Methanobrevibacter smithii
ATCC 35061]
Length = 209
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H S ++ R++ K GV+ + + D I + V P +
Sbjct: 83 VHVGQSDMPAKTARSMIGEDKILGVSAANIK--EAKKAQRESADYIGVGAVYP--TNTKD 138
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISY 209
+++PK ++ K ++ I + GG+T N L G D L VV S+ K
Sbjct: 139 DATSVPK-KELKEIVKSVDIPVVAIGGITQENAHELNDCGIDGLSVV-SAIMEAKNPKIA 196
Query: 210 AKRL 213
++ L
Sbjct: 197 SENL 200
>gi|119899654|ref|YP_934867.1| putative molybdenum transport protein [Azoarcus sp. BH72]
gi|119672067|emb|CAL95981.1| putative molybdenum transport protein [Azoarcus sp. BH72]
Length = 281
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLV 195
++ G QL + ++ + +A I + L GG+ + N + V AGAD+LV
Sbjct: 203 VVWTEAGADVIQLEKFPPERVAECRAAIAHSRMRPLLAAAGGIKADNAGAYVAAGADVLV 262
Query: 196 VGSSFFNQKGEISYAKRLND 215
S+ F L D
Sbjct: 263 T-SAPFTAAPRDVKVTFLRD 281
>gi|49083267|gb|AAT50988.1| PA4524 [synthetic construct]
Length = 283
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 173 HIAACGGIDRAIAEARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 221 ELSLDDMRTAVALTAGRA-KLEASGGINEGTLRNIAETGVDYISIGT 266
>gi|254787016|ref|YP_003074445.1| thiamine-phosphate diphosphorylase [Teredinibacter turnerae T7901]
gi|237687092|gb|ACR14356.1| thiamine-phosphate diphosphorylase [Teredinibacter turnerae T7901]
Length = 212
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K + + + GG+ + N + +AGAD L +S F+ S A+ L
Sbjct: 152 LKKAKTQFQLPIVAIGGIDAANALEVYRAGADSLACCNSLFDGNNVKSRAEML 204
>gi|17229583|ref|NP_486131.1| nicotinate-nucleotide pyrophosphorylase [Nostoc sp. PCC 7120]
gi|17131182|dbj|BAB73790.1| nicotinate-nucleotide pyrophosphorylase [Nostoc sp. PCC 7120]
Length = 287
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 13/105 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI--LIMTVNPGFGGQQ 149
H ++ I +++ I + + E +E V + ++ +IM N
Sbjct: 175 HIAAAGGIGKAITRIRSQIPY---TLTIEVEAETIEQVKEALEYKADIIMLDNMPVD--- 228
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L+ + IRQ + +E G VT I+++ + G D +
Sbjct: 229 LMRQAVQLIRQ-----QDNGVKIEASGNVTLETIRAVAETGVDYI 268
>gi|254470853|ref|ZP_05084256.1| thiamine-phosphate pyrophosphorylase [Pseudovibrio sp. JE062]
gi|211959995|gb|EEA95192.1| thiamine-phosphate pyrophosphorylase [Pseudovibrio sp. JE062]
Length = 197
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 67/193 (34%), Gaps = 17/193 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
I + G K + + D P VI++ H I+ + +
Sbjct: 14 IEKLVPHGVKLVQLRIKDQ---PEAEVRRQVIKAQD-----FCKAHGTQLIINDYWELAL 65
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+ GCD I E + + G++ + E + + E + + + V
Sbjct: 66 ELGCDFIHLGQEDMDTAD--FAALRRASVRFGLSTHDEAELD--RALSHEPEYVALGPVY 121
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSF 200
P + + + ++ + K ++G L GG+T + + +AGAD VV +
Sbjct: 122 PTKLKKMKWAPQGLDRVHRWKQMVG--GTPLVAIGGLTPERLAGVFEAGADSAAVV-TDI 178
Query: 201 FNQKGEISYAKRL 213
+S A+
Sbjct: 179 LQAPDPVSRAQEW 191
>gi|28211401|ref|NP_782345.1| thiamin-phosphate pyrophosphorylase [Clostridium tetani E88]
gi|28203842|gb|AAO36282.1| thiamin-phosphate pyrophosphorylase [Clostridium tetani E88]
Length = 222
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H +R I K GV+ N T L+ D D + + + P +
Sbjct: 99 IHIGQKDLPANIVRKIIGEDKILGVSAN--TIEDALKAQRDGADYLGVGAIFPTNSKKDA 156
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
++I +++ K + +I + GG+ N++ L + D + V S+ ++
Sbjct: 157 ESTSIETLKEIKNAV---NIPIVAIGGINENNVQKLKETNIDGIAVISTILGKEDVKKAC 213
Query: 211 KRLNDL 216
+ L
Sbjct: 214 EELTGF 219
>gi|41018339|sp|Q893R0|THIE_CLOTE RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
Length = 209
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H +R I K GV+ N T L+ D D + + + P +
Sbjct: 86 IHIGQKDLPANIVRKIIGEDKILGVSAN--TIEDALKAQRDGADYLGVGAIFPTNSKKDA 143
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
++I +++ K + +I + GG+ N++ L + D + V S+ ++
Sbjct: 144 ESTSIETLKEIKNAV---NIPIVAIGGINENNVQKLKETNIDGIAVISTILGKEDVKKAC 200
Query: 211 KRLNDL 216
+ L
Sbjct: 201 EELTGF 206
>gi|116753942|ref|YP_843060.1| orotidine 5'-phosphate decarboxylase [Methanosaeta thermophila PT]
gi|116665393|gb|ABK14420.1| orotidine-5'-phosphate decarboxylase [Methanosaeta thermophila PT]
Length = 234
Score = 39.0 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 27/175 (15%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP-------ESSPHIRRSL 103
A VI L +D HL+ + + AG + H E+ + +
Sbjct: 77 APVIADL-KIADIPNTNHLICNR-------LFSAGAQGVIAHAFTGRDSLEACVDVAKRW 128
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
+ ++ + + V + + M+ ++ G +IR +
Sbjct: 129 ----SGDVYAVTEMSHPGALEFMAPVAERMVMLALVAGASGIVAPATRP---ERIRALRR 181
Query: 164 LIGKRSISLEVDGGVTSR--NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
G +I + GV ++ +++ ++AGAD +VG S + + A+ L DL
Sbjct: 182 AAGGLTI---ISPGVGAQGGSLRDALEAGADYAIVGRSVYESANPRAAAEALLDL 233
>gi|15599720|ref|NP_253214.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
PAO1]
gi|107099891|ref|ZP_01363809.1| hypothetical protein PaerPA_01000912 [Pseudomonas aeruginosa PACS2]
gi|12644660|sp|P30819|NADC_PSEAE RecName: Full=Nicotinate-nucleotide pyrophosphorylase
[carboxylating]; AltName: Full=Quinolinate
phosphoribosyltransferase [decarboxylating];
Short=QAPRTase
gi|9950766|gb|AAG07912.1|AE004866_6 nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
PAO1]
Length = 282
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 173 HIAACGGIDRAIAEARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 221 ELSLDDMRTAVALTAGRA-KLEASGGINEGTLRNIAETGVDYISIGT 266
>gi|119475538|ref|ZP_01615891.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [marine gamma
proteobacterium HTCC2143]
gi|119451741|gb|EAW32974.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [marine gamma
proteobacterium HTCC2143]
Length = 246
Score = 39.0 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F G+ + + I +A + +++ GG+ I+ + AG + L
Sbjct: 47 LHLVDLNGAFDGKPINGDAVTSIAKA-----YPDLPIQIGGGIRNLETIEHYINAGVNYL 101
Query: 195 VVGS 198
++G+
Sbjct: 102 IIGT 105
>gi|27467259|ref|NP_763896.1| putative hexulose-6-phosphate synthase [Staphylococcus epidermidis
ATCC 12228]
gi|81843092|sp|Q8CQ69|HPS_STAES RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|27314802|gb|AAO03938.1|AE016745_37 putative hexulose-6-phosphate synthase [Staphylococcus epidermidis
ATCC 12228]
Length = 210
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL++VG
Sbjct: 131 IAVHTGYDLQAEGKSPLDSLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAEDPDLVIVGG 188
Query: 199 SFFNQKGEISYAKRLN 214
N + AK+
Sbjct: 189 GIANADDPVEAAKQCR 204
>gi|308172201|ref|YP_003918906.1| 3-hexulose-6-phosphate synthase [Bacillus amyloliquefaciens DSM 7]
gi|307605065|emb|CBI41436.1| 3-hexulose-6-phosphate synthase (HPS) [Bacillus amyloliquefaciens
DSM 7]
gi|328552008|gb|AEB22500.1| 3-hexulose-6-phosphate synthase (HPS) [Bacillus amyloliquefaciens
TA208]
gi|328910273|gb|AEB61869.1| 3-hexulose-6-phosphate synthase (HPS) [Bacillus amyloliquefaciens
LL3]
Length = 211
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 6/141 (4%)
Query: 78 INIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
I A+AG DIIT ++ I+ ++ KK V + + ID++
Sbjct: 70 IMKAAEAGADIITV-LGATDDSTIKGAVSEAKKQQKKILVDMINVKDLETRATEIDQLG- 127
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + V+ G+ Q +++ ++ K + ++ GG+ + ++ DL++
Sbjct: 128 VDYICVHTGYDLQAEGKNSFGELTAIKKAVKNTKTAIA--GGIKLDTLPEAIKQNPDLII 185
Query: 196 VGSSFFNQKGEISYAKRLNDL 216
VG + A ++ L
Sbjct: 186 VGGGITGADDKADAASKMKQL 206
>gi|256811200|ref|YP_003128569.1| tryptophan synthase, alpha subunit [Methanocaldococcus fervens
AG86]
gi|256794400|gb|ACV25069.1| tryptophan synthase, alpha subunit [Methanocaldococcus fervens
AG86]
Length = 279
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 55/160 (34%), Gaps = 20/160 (12%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + ++G I G + P TP L+ ++++
Sbjct: 110 EEFVKKCKESGVSGIIVPDLPIEEADSLYNYCKKYGVDLIFLVAPTTPDERLKRILEKCS 169
Query: 135 MILIMTVNPGFGG--QQLIESTIPKIRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAG 190
+ + G G +++ E T +R+ K + G G++ +++ + +
Sbjct: 170 GFVYVVSVTGTTGAREKIAEETKELVRRVKKYSKIPACV----GFGISKKEHVEEITEI- 224
Query: 191 ADLLVVGSSFFN-----------QKGEISYAKRLNDLKKS 219
AD +VGS+ K E + K L + K+
Sbjct: 225 ADGAIVGSAIVKIVEKHLDENGQIKDEEKFLKDLEEFVKN 264
>gi|261198775|ref|XP_002625789.1| 5-proFAR isomerase His6 [Ajellomyces dermatitidis SLH14081]
gi|239594941|gb|EEQ77522.1| 5-proFAR isomerase His6 [Ajellomyces dermatitidis SLH14081]
gi|239609938|gb|EEQ86925.1| 5-proFAR isomerase His6 [Ajellomyces dermatitidis ER-3]
gi|327350861|gb|EGE79718.1| 5-proFAR isomerase [Ajellomyces dermatitidis ATCC 18188]
Length = 258
Score = 39.0 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
L+V GG+ +N + ++AGA+ +V+ S F
Sbjct: 79 LQVAGGINDKNAQYWIEAGAEKVVITSYLF 108
>gi|312136238|ref|YP_004003575.1| quinolinate phosphoribosyl transferase [Methanothermus fervidus DSM
2088]
gi|311223957|gb|ADP76813.1| Quinolinate phosphoribosyl transferase [Methanothermus fervidus DSM
2088]
Length = 330
Score = 39.0 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 158 IRQAKALIGKRSI---SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+R+ + + + V GG+ IK+L +AGAD VG + I +
Sbjct: 246 VREVRKRLDLEGFSHVKIFVSGGLNPEKIKTLSEAGADAFGVGWYI-SAAPPIEMTMDIK 304
Query: 215 DLKKSALA 222
+++ +A
Sbjct: 305 EVEGKPIA 312
>gi|149200356|ref|ZP_01877374.1| KDPG and KHG aldolase [Lentisphaera araneosa HTCC2155]
gi|149136537|gb|EDM24972.1| KDPG and KHG aldolase [Lentisphaera araneosa HTCC2155]
Length = 205
Score = 39.0 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL---- 213
I+ AKA++ + L V GGV NIK ++GAD +GSS + I+ K L
Sbjct: 139 IKAAKAILPAGTQVLAV-GGVDQSNIKEWQESGADGFGLGSSLYKSSYTIAEIKALSFEF 197
Query: 214 -NDLKK 218
+LKK
Sbjct: 198 TTELKK 203
>gi|298695365|gb|ADI98587.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus ED133]
Length = 213
Score = 39.0 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K + + + + GG+ + N+ +V+AGA+ + V S+ + R D
Sbjct: 152 EMIATFKEMNPQ--LPIVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKD 209
Query: 216 L 216
Sbjct: 210 F 210
>gi|18978350|ref|NP_579707.1| nicotinate-nucleotide pyrophosphorylase [Pyrococcus furiosus DSM
3638]
gi|18894183|gb|AAL82102.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase (decarboxylating)) [Pyrococcus
furiosus DSM 3638]
Length = 276
Score = 39.0 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I + K L + + +E+ GG+T NI+ + D++ +G
Sbjct: 220 IEELKKLGLREKVKIEISGGITPENIREYARLDVDVISLG 259
>gi|20093884|ref|NP_613731.1| nicotinate-nucleotide pyrophosphorylase [Methanopyrus kandleri
AV19]
gi|19886819|gb|AAM01661.1| Nicotinate-nucleotide pyrophosphorylase [Methanopyrus kandleri
AV19]
Length = 282
Score = 39.0 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDEI----DMILIMTVNPGFGGQQLIESTIPKIR 159
+ ++ G V +ED ++ D +L+ + P I + ++R
Sbjct: 176 DAVRRARERVGFTKVIGVEVESIEDAVEAAKAGADHVLLDNMKPAE-----IRRAVNEVR 230
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ + + LE GG+T N + G D++ +G
Sbjct: 231 KVRE-----DVILEASGGITPENAPEYAETGVDVISLG 263
>gi|332528600|ref|ZP_08404582.1| nicotinate-nucleotide pyrophosphorylase [Hylemonella gracilis ATCC
19624]
gi|332041916|gb|EGI78260.1| nicotinate-nucleotide pyrophosphorylase [Hylemonella gracilis ATCC
19624]
Length = 301
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL----EDVIDEIDMILIMTVNPGFGG 147
H ++ + L + A G A E V L E ++ M+L+
Sbjct: 187 HIAAAGGVTEVLAQVRATASIAGAAKFVEIEVETLTQLEEALLAGATMVLL--------- 237
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+P +R+A + R+I LEV GGV ++ + G D + +G + I
Sbjct: 238 ---DNMDLPTLREAVRINAGRAI-LEVSGGVNMGTVREIAATGVDRISIG-ALTKDVKAI 292
Query: 208 SYAKRLNDL 216
++ R DL
Sbjct: 293 DFSMRFTDL 301
>gi|330508305|ref|YP_004384733.1| orotidine 5'-phosphate decarboxylase [Methanosaeta concilii GP-6]
gi|328929113|gb|AEB68915.1| orotidine 5'-phosphate decarboxylase [Methanosaeta concilii GP-6]
Length = 219
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSR--NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+IR +++IG + I + GV ++ + +QAGAD L+VG S + ++ AK L
Sbjct: 152 ERIRMIRSIIGDKLI---ISPGVGAQGGSAGEALQAGADYLIVGRSVYGSADPVAQAKEL 208
Query: 214 ND 215
Sbjct: 209 AA 210
>gi|312113641|ref|YP_004011237.1| thiamine-phosphate pyrophosphorylase [Rhodomicrobium vannielii ATCC
17100]
gi|311218770|gb|ADP70138.1| thiamine-phosphate pyrophosphorylase [Rhodomicrobium vannielii ATCC
17100]
Length = 199
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ ++ + KAL + +++ GG+T + AGAD + V S +
Sbjct: 133 PWAPQGLARVGEWKALAKRPLVAI---GGITLERAPDVYAAGADSIAVVSDVVFAPDPEA 189
Query: 209 YAKRLNDL 216
A+ L
Sbjct: 190 RAQDWLAL 197
>gi|158428192|pdb|2DZS|A Chain A, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(E103a) From A Hyperthermophile, Pyrococcus Furiosus
gi|158428193|pdb|2DZS|B Chain B, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(E103a) From A Hyperthermophile, Pyrococcus Furiosus
Length = 248
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
+++ R +S + + + + + +G D I H +
Sbjct: 69 FWIVKEFRRHSSTPI-VLMTYYNPIYRAGVRNFLAAAKASGVDGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IAREEGIKTVFLAAPNTPDERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
+L
Sbjct: 243 EEL 245
>gi|156937064|ref|YP_001434860.1| orotidine 5'-phosphate decarboxylase [Ignicoccus hospitalis KIN4/I]
gi|156566048|gb|ABU81453.1| Orotidine 5'-phosphate decarboxylase [Ignicoccus hospitalis KIN4/I]
Length = 215
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + + + V GG+T ++ V AD++VVG + L
Sbjct: 155 LAALAERVRSLGLVVAVAGGITPETARAFVGK-ADVVVVGGYITKSPNPEKAVEEL 209
>gi|115977090|ref|XP_001176077.1| PREDICTED: similar to ENSANGP00000018221 [Strongylocentrotus
purpuratus]
Length = 377
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 9/146 (6%)
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV 141
D +T++P+++ +R I + V T + + +D IL+
Sbjct: 206 HFQYVDEMTYNPKAT---WEYIRWIKKVTSLPIVCKGILTAESASDAASAGVDGILVSAH 262
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN-IKSLVQAGADLLVVGSSF 200
G Q+ + I + + + R + + +DGGV + I + GA + +G
Sbjct: 263 --GGRQQESSPAPIDALAEVVEAVHGRGVEVYMDGGVRTGTDIFKALGRGARAVFLGRPI 320
Query: 201 FNQ---KGEISYAKRLNDLKKSALAI 223
+G + L L+ AI
Sbjct: 321 LWGLACQGPEGVTRILQILRDQLDAI 346
>gi|72125013|ref|XP_793811.1| PREDICTED: similar to MGC108441 protein, partial
[Strongylocentrotus purpuratus]
Length = 350
Score = 39.0 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 9/146 (6%)
Query: 82 ADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV 141
D +T++P+++ +R I + V T + + +D IL+
Sbjct: 206 HFQYVDEMTYNPKAT---WEYIRWIKKVTSLPIVCKGILTAESASDAASAGVDGILVSAH 262
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN-IKSLVQAGADLLVVGSSF 200
G Q+ + I + + + R + + +DGGV + I + GA + +G
Sbjct: 263 --GGRQQESSPAPIDALAEVVEAVHGRGVEVYMDGGVRTGTDIFKALGRGARAVFLGRPI 320
Query: 201 FNQ---KGEISYAKRLNDLKKSALAI 223
+G + L L+ AI
Sbjct: 321 LWGLACQGPEGVTRILQILRDQLDAI 346
>gi|260434511|ref|ZP_05788481.1| putative N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus
sp. WH 8109]
gi|260412385|gb|EEX05681.1| putative N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus
sp. WH 8109]
Length = 229
Score = 39.0 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 26/171 (15%)
Query: 50 GADVIRSLRSYSD----------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSP-- 97
+ I ++R + D + I+ I + AG D+I+ + P
Sbjct: 49 SPEHIGAVRRRCPDALIIGLWKCTFPDSSVYITPGWKEIQAVWSAGADVISIDATARPRP 108
Query: 98 ---HIRRSLRTIHAMGKKTGVAINPETPVAILEDVID--EIDMILIMTVNPGFGGQ--QL 150
+ ++ + +A V LE+ + E+ + T G+ Q
Sbjct: 109 AGQDLAALIQRSRDELRAPLMA-----DVDSLENGLRAAELGCDWVGTTLYGYTEDTAQQ 163
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
+ Q +A + S+ L +GG+ + + + +QAGAD +VVG++
Sbjct: 164 RPPAFDLLPQLRAELPS-SVRLICEGGIASPADARLALQAGADTVVVGTAI 213
>gi|218893617|ref|YP_002442486.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
LESB58]
gi|218773845|emb|CAW29659.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
LESB58]
Length = 282
Score = 39.0 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 173 HIAACGGIDRAIAEARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 221 ELSLDDMRTAVALTAGRA-KLEASGGINEGTLRNIAETGVDYISIGT 266
>gi|150399296|ref|YP_001323063.1| modD protein [Methanococcus vannielii SB]
gi|150011999|gb|ABR54451.1| modD protein [Methanococcus vannielii SB]
Length = 283
Score = 39.0 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY-AKRLN 214
GG+ NI+ + G D++V S +F + +I ++++
Sbjct: 244 GGINIENIEEYAKTGVDVIVTSSLYFTKPADIKALIEKID 283
>gi|315280802|ref|ZP_07869596.1| thiamine-phosphate pyrophosphorylase [Listeria marthii FSL S4-120]
gi|313615553|gb|EFR88904.1| thiamine-phosphate pyrophosphorylase [Listeria marthii FSL S4-120]
Length = 214
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+I + GG+ N ++ AGAD + V S+ + S K+L +
Sbjct: 163 TIPIVGIGGINETNSTEVLAAGADGVSVISAITRSEDCKSVIKQLKN 209
>gi|258422908|ref|ZP_05685808.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9635]
gi|257846932|gb|EEV70946.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus A9635]
Length = 213
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K + + + + GG+ + N+ +V+AGA+ + V S+ + R D
Sbjct: 152 EMIATFKEMNPQ--LPIVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKD 209
Query: 216 L 216
Sbjct: 210 F 210
>gi|226192780|pdb|3GNN|A Chain A, Crystal Structure Of Nicotinate-Nucleotide
Pyrophosphorylase From Burkholderi Pseudomallei
gi|226192781|pdb|3GNN|B Chain B, Crystal Structure Of Nicotinate-Nucleotide
Pyrophosphorylase From Burkholderi Pseudomallei
Length = 298
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N E PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 202 AAFALNAEVPVQIEVETLDQLRTALAH----GARSVLLDNFTLDMMRDAVRVTEGRAV-L 256
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 257 EVSGGVNFDTVRAIAETGVD 276
>gi|328951251|ref|YP_004368586.1| Thiamine-phosphate pyrophosphorylase [Marinithermus hydrothermalis
DSM 14884]
gi|328451575|gb|AEB12476.1| Thiamine-phosphate pyrophosphorylase [Marinithermus hydrothermalis
DSM 14884]
Length = 209
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRL 213
+ +R A + ++ GG+T N+ +++AGA + VV + + A R
Sbjct: 142 LEYVRWAARHLPADAVW-YAIGGITLENLPEVLEAGARRVAVV-RAILDAPDPERAAARF 199
Query: 214 NDLKKSA 220
++ A
Sbjct: 200 REVLDGA 206
>gi|282900037|ref|ZP_06307996.1| hypothetical protein CRC_01430 [Cylindrospermopsis raciborskii
CS-505]
gi|281195069|gb|EFA70007.1| hypothetical protein CRC_01430 [Cylindrospermopsis raciborskii
CS-505]
Length = 231
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 17/180 (9%)
Query: 51 ADVIRSLRSYSDSVF---------DCHLMISSIDSHINIIADAGCDIITFHPESSPHI-- 99
+ I++++ + + I+ H +A+AG DII
Sbjct: 52 PNHIKAVKEKVPVPIIGLWKQIVAESDVYITPQFHHALAVAEAGADIIAIDATQRKRPGG 111
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPK 157
+ + I + ++ G + + + + ++ T G+ + LI
Sbjct: 112 EKLVDIIRGIHQQIGKPVMADVDTFTSAKLAIDSGADIVGTTLFGYTEETKNLIPPGWEL 171
Query: 158 IRQAKALIGKRSISLEVD--GGVT-SRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRL 213
++ + + V GG++ K ++ GAD +VVG++ +Y KR+
Sbjct: 172 LKHIVENLKVEHPDILVICEGGISSPEEAKKALELGADAVVVGTAITGIDLLVKAYIKRI 231
>gi|262202666|ref|YP_003273874.1| IMP dehydrogenase [Gordonia bronchialis DSM 43247]
gi|262086013|gb|ACY21981.1| IMP dehydrogenase family protein [Gordonia bronchialis DSM 43247]
Length = 478
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 56/138 (40%), Gaps = 17/138 (12%)
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST 154
+ I R R + + V + +TP + D + ++ + L + V+P +
Sbjct: 140 ACTGIDRFTR-VRDVLDPAMVTLPVDTPGREVFDALGDLHLALAVLVHPDGT----LAGV 194
Query: 155 IPKIRQAKALIGKRSIS------LEVDGGVTSR---NIKSLVQAGADLLVVGSSFFNQKG 205
+ +I + I + ++ + G+ +SLV+AGADLLVV ++
Sbjct: 195 LTRIGALRHGIYRPNVDAADKLRIAAAVGINGDVAGRARSLVEAGADLLVVDTA---HGH 251
Query: 206 EISYAKRLNDLKKSALAI 223
+ L+ + + L +
Sbjct: 252 QEKMIAALDTIASAHLGV 269
>gi|119899739|ref|YP_934952.1| thiamine-phosphate pyrophosphorylase [Azoarcus sp. BH72]
gi|166228067|sp|A1KB60|THIE_AZOSB RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|119672152|emb|CAL96066.1| Thiamine-phosphate diphosphorylase [Azoarcus sp. BH72]
Length = 206
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+A+A + ++ GG+T N +L++AGADLL V S F + L S
Sbjct: 151 RARAALDCPVAAI---GGITLDNAPALIEAGADLLAVISDVFAAADPLQ-----RALAYS 202
Query: 220 AL 221
AL
Sbjct: 203 AL 204
>gi|91773610|ref|YP_566302.1| geranylgeranylglyceryl phosphate synthase-like protein
[Methanococcoides burtonii DSM 6242]
gi|121684284|sp|Q12VH4|GGGPS_METBU RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|91712625|gb|ABE52552.1| geranylgeranylglyceryl phosphate synthase [Methanococcoides
burtonii DSM 6242]
Length = 247
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
T I K ++G L V GG+ + K AGAD++V G+ +
Sbjct: 180 RPITPETIGAVKHVLGDN--KLIVGGGIRDGKTAKICADAGADMIVTGTIV---EETDDV 234
Query: 210 AKRLNDL 216
K++ ++
Sbjct: 235 RKKIEEI 241
>gi|85705980|ref|ZP_01037076.1| thiamine-phosphate pyrophosphorylase [Roseovarius sp. 217]
gi|85669568|gb|EAQ24433.1| thiamine-phosphate pyrophosphorylase [Roseovarius sp. 217]
Length = 198
Score = 38.6 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 24/189 (12%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
AD+ + G + + D VPN +++ + + + H I
Sbjct: 12 HADWLH------RLLPLGVGLVQLRIKD---VPN-----GMLKQQIALAQGLCRAHGAIL 57
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
++ H DAGC + E + + G K G++ + +
Sbjct: 58 VVNDHWQAAIDAGCTWVHLGQEDLDTAD--IPALRRAGIKIGLSTHDHAELDRALSYAP- 114
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D + + V P + + E + K+ + K LIG I L GG++ + + AGA
Sbjct: 115 -DYVALGPVYPTILKKMKWHEQGLGKLTEWKHLIG--DIPLIAIGGMSVERAQGALSAGA 171
Query: 192 DLLVVGSSF 200
D++ S+
Sbjct: 172 DVV---SAV 177
>gi|53720578|ref|YP_109564.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei K96243]
gi|161579501|ref|YP_104034.2| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
mallei ATCC 23344]
gi|52210992|emb|CAH36980.1| putative aldolase [Burkholderia pseudomallei K96243]
Length = 209
Score = 38.6 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 72 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 124
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 125 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 173
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 174 GLGSALY-APGQTSAVTAVRA 193
>gi|254179035|ref|ZP_04885689.1| putative KDPG/KHG aldolase [Burkholderia mallei ATCC 10399]
gi|160694949|gb|EDP84957.1| putative KDPG/KHG aldolase [Burkholderia mallei ATCC 10399]
Length = 227
Score = 38.6 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 90 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 142
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 143 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 191
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 192 GLGSALY-APGQTSAVTAVRA 211
>gi|126663040|ref|ZP_01734038.1| hypothetical protein FBBAL38_06800 [Flavobacteria bacterium BAL38]
gi|126624698|gb|EAZ95388.1| hypothetical protein FBBAL38_06800 [Flavobacteria bacterium BAL38]
Length = 238
Score = 38.6 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
++ IR I I L V GG+ + + I+ + AGADL+V+G++F
Sbjct: 182 QHVSLDMIRYVAQNIE---IPLIVGGGIRSMKTIQEVYNAGADLVVIGTAF 229
>gi|320104424|ref|YP_004180015.1| thiamine-phosphate pyrophosphorylase [Isosphaera pallida ATCC
43644]
gi|319751706|gb|ADV63466.1| thiamine-phosphate pyrophosphorylase [Isosphaera pallida ATCC
43644]
Length = 545
Score = 38.6 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 176 GGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
GG+ N+ +++AGA + V G + A+ L D + A+AI
Sbjct: 492 GGIDESNLDDVLEAGARRVAVSG-ALLRAGSPRKVARSLKDRLEQAVAI 539
>gi|150389063|ref|YP_001319112.1| thiamine-phosphate pyrophosphorylase [Alkaliphilus metalliredigens
QYMF]
gi|189030305|sp|A6TMN5|THIE_ALKMQ RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|149948925|gb|ABR47453.1| thiamine-phosphate pyrophosphorylase [Alkaliphilus metalliredigens
QYMF]
Length = 211
Score = 38.6 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
SI + GG++ N ++Q+GAD + V S+ +++ AK L
Sbjct: 160 SIPIVGIGGISQGNASQVIQSGADGIAVVSAILSKQYPEIAAKNL 204
>gi|293402011|ref|ZP_06646151.1| 3-hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304669|gb|EFE45918.1| 3-hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 208
Score = 38.6 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
V GGV I ++V+ GA ++VVG + N + AK +
Sbjct: 164 VAGGVKLSTIDAIVEEGAGIIVVGGAICNAQARAEAAKEMK 204
>gi|171058592|ref|YP_001790941.1| nicotinate-nucleotide pyrophosphorylase [Leptothrix cholodnii SP-6]
gi|170776037|gb|ACB34176.1| nicotinate-nucleotide pyrophosphorylase [Leptothrix cholodnii SP-6]
Length = 289
Score = 38.6 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ +R ++ A+G + ET + +++D++L+ I
Sbjct: 171 HVSAAGGLREAIWQARALGLSVPLMTEAETLAEARIALDEDVDLLLV-----DDFELDDI 225
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ + +R+ +A GK +E GG T +++L + G D + VG
Sbjct: 226 RTAVALVREHRACGGKT--LIEYSGGATLETVRALAETGVDRISVG 269
>gi|145591630|ref|YP_001153632.1| tryptophan synthase subunit alpha [Pyrobaculum arsenaticum DSM
13514]
gi|145283398|gb|ABP50980.1| tryptophan synthase, alpha chain [Pyrobaculum arsenaticum DSM
13514]
Length = 235
Score = 38.6 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 158 IRQAKALIGKRSISLE----VDGGVTSRNIKSLVQAGADLLVVGSSFFN--QKGEISYAK 211
++ + L + + VD + LV+AGAD +VVG++F QK
Sbjct: 169 VKILREL--APDVYIVAGFAVD---SPAKAAKLVRAGADGIVVGTAFMRRLQKDVREALA 223
Query: 212 RLNDLKKSAL 221
L ++KK+ L
Sbjct: 224 FLAEVKKALL 233
>gi|323442430|gb|EGB00059.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus O46]
Length = 213
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K + + + + GG+ + N+ +V+AGA+ + V S+ + R D
Sbjct: 152 EMIATFKEMNPQ--LPIVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKD 209
Query: 216 L 216
Sbjct: 210 F 210
>gi|282917440|ref|ZP_06325193.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus D139]
gi|283771259|ref|ZP_06344148.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus H19]
gi|282318642|gb|EFB48999.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus D139]
gi|283459464|gb|EFC06557.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus H19]
Length = 213
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K + + + + GG+ + N+ +V+AGA+ + V S+ + R D
Sbjct: 152 EMIATFKEMNPQ--LPIVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKD 209
Query: 216 L 216
Sbjct: 210 F 210
>gi|77919829|ref|YP_357644.1| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Pelobacter
carbinolicus DSM 2380]
gi|77545912|gb|ABA89474.1| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Pelobacter
carbinolicus DSM 2380]
Length = 479
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ I L GG+ N ++ AGAD + + S+ A+ +
Sbjct: 148 LHDIRQAVDIPLVAIGGINRDNTSEVIHAGADAIALISAVMADPSPALAAREI 200
>gi|49484315|ref|YP_041539.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257426230|ref|ZP_05602645.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428888|ref|ZP_05605282.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257431498|ref|ZP_05607871.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257434207|ref|ZP_05610557.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus E1410]
gi|257437119|ref|ZP_05613159.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus M876]
gi|282904759|ref|ZP_06312633.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus C160]
gi|282906436|ref|ZP_06314287.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282909404|ref|ZP_06317219.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282911656|ref|ZP_06319455.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914938|ref|ZP_06322718.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus M899]
gi|282920269|ref|ZP_06327993.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus C427]
gi|282925480|ref|ZP_06333134.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus C101]
gi|283958871|ref|ZP_06376316.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293509009|ref|ZP_06667796.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510922|ref|ZP_06669621.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus M809]
gi|293547524|ref|ZP_06672199.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus M1015]
gi|295428678|ref|ZP_06821304.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297589842|ref|ZP_06948482.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus MN8]
gi|56749730|sp|Q6GEY4|THIE_STAAR RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|49242444|emb|CAG41160.1| putative thiamine-phosphate pyrophosphorylase [Staphylococcus
aureus subsp. aureus MRSA252]
gi|257270935|gb|EEV03108.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274230|gb|EEV05747.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257277739|gb|EEV08409.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257280846|gb|EEV10991.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus E1410]
gi|257283512|gb|EEV13639.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus M876]
gi|282312881|gb|EFB43282.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus C101]
gi|282316129|gb|EFB46510.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus C427]
gi|282321141|gb|EFB51472.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus M899]
gi|282324421|gb|EFB54734.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282326674|gb|EFB56972.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282330386|gb|EFB59904.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282594792|gb|EFB99769.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus C160]
gi|283789589|gb|EFC28412.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290919644|gb|EFD96717.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus M1015]
gi|291094713|gb|EFE24985.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466207|gb|EFF08734.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus M809]
gi|295127348|gb|EFG56988.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297576970|gb|EFH95684.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus MN8]
gi|312437491|gb|ADQ76562.1| thiamine-phosphate diphosphorylase [Staphylococcus aureus subsp.
aureus TCH60]
gi|315193253|gb|EFU23651.1| putative thiamine-phosphate pyrophosphorylase [Staphylococcus
aureus subsp. aureus CGS00]
Length = 213
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K + + + + GG+ + N+ +V+AGA+ + V S+ + R D
Sbjct: 152 EMIATFKEMNPQ--LPIVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKD 209
Query: 216 L 216
Sbjct: 210 F 210
>gi|302871598|ref|YP_003840234.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
obsidiansis OB47]
gi|302574457|gb|ADL42248.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
obsidiansis OB47]
Length = 488
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
D ++ + A D+I T H S + +++ I + V D
Sbjct: 229 RDTDERVDALVKAQVDVIVVDTAHG-HSKGVIETVKKIKSRYPNIQVVAGNIATAEAARD 287
Query: 129 VIDEIDMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I+ + + + PG G + I I + + I + DGG+
Sbjct: 288 LIEAGADCVKVGIGPGSICTTRVVAGIGV--PQITAIMDVAKVAKEYGIPVIADGGIRYS 345
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGAD++++GS
Sbjct: 346 GDITKALAAGADVVMIGS 363
>gi|296331472|ref|ZP_06873944.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676458|ref|YP_003868130.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151587|gb|EFG92464.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414702|gb|ADM39821.1| thiamine-phosphate pyrophosphorylase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 220
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + GG+T N ++QAGAD + + S+ + A++ ++
Sbjct: 167 DIPIVGIGGITIENAAPVIQAGADGVSMISAISQAEDPEGAARKFHE 213
>gi|227496294|ref|ZP_03926590.1| possible dihydroorotate oxidase [Actinomyces urogenitalis DSM
15434]
gi|226834163|gb|EEH66546.1| possible dihydroorotate oxidase [Actinomyces urogenitalis DSM
15434]
Length = 348
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSS-FF 201
G G L+ ++ +R+ +A +G+ + V GG++S + + ++ AGADLL ++ +
Sbjct: 270 GLSGAPLLPRSLEVVRRLRARLGEGPTIIGV-GGISSIMDAELMLDAGADLLQAYTAFIY 328
Query: 202 NQKG-EISYAKRLNDLKK 218
N + L +++
Sbjct: 329 NGPAWPGRINRALATMRR 346
>gi|154148634|ref|YP_001406507.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Campylobacter hominis
ATCC BAA-381]
gi|167011519|sp|A7I1W6|HIS4_CAMHC RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|153804643|gb|ABS51650.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Campylobacter hominis ATCC BAA-381]
Length = 236
Score = 38.6 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ P + E D + I+ ++ F G+ TI KI + ++ +EV GG+
Sbjct: 30 DKPWELAEKFADLGAKWLHIVDLDGAFAGEAKNAKTIEKI------VKSTNLKIEVGGGI 83
Query: 179 -TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
IK +G ++GS+ + K++ K A+ ID
Sbjct: 84 RDEERIKFYKNSGVSRFILGSAALKNP---EFVKQMAKKYKIAVGID 127
>gi|281355979|ref|ZP_06242472.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Victivallis vadensis ATCC BAA-548]
gi|281317348|gb|EFB01369.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Victivallis vadensis ATCC BAA-548]
Length = 259
Score = 38.6 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AK + L+V GGVT+ N + AGA ++V S F RL L +
Sbjct: 74 EAAKRALAAYPGGLQVGGGVTAENAPEWLAAGAGQVIVTSYIF--ADGELKRDRLEKLFR 131
Query: 219 S 219
S
Sbjct: 132 S 132
>gi|121600033|ref|YP_991758.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
mallei SAVP1]
gi|124383432|ref|YP_001027252.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
mallei NCTC 10229]
gi|126439229|ref|YP_001060461.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei 668]
gi|126448777|ref|YP_001082813.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
mallei NCTC 10247]
gi|134280576|ref|ZP_01767287.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 305]
gi|166998568|ref|ZP_02264426.1| putative KDPG/KHG aldolase [Burkholderia mallei PRL-20]
gi|167817456|ref|ZP_02449136.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei 91]
gi|167895933|ref|ZP_02483335.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei 7894]
gi|167904320|ref|ZP_02491525.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei NCTC 13177]
gi|237813854|ref|YP_002898305.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei MSHR346]
gi|238561255|ref|ZP_04609510.1| keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate
aldolase [Burkholderia mallei GB8 horse 4]
gi|254180608|ref|ZP_04887206.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 1655]
gi|254202753|ref|ZP_04909116.1| putative KDPG/KHG aldolase [Burkholderia mallei FMH]
gi|254208095|ref|ZP_04914445.1| putative KDPG/KHG aldolase [Burkholderia mallei JHU]
gi|52429568|gb|AAU50161.1| KDPG/KHG aldolase, putative [Burkholderia mallei ATCC 23344]
gi|121228843|gb|ABM51361.1| putative KDPG/KHG aldolase [Burkholderia mallei SAVP1]
gi|124291452|gb|ABN00721.1| putative KDPG/KHG aldolase [Burkholderia mallei NCTC 10229]
gi|126218722|gb|ABN82228.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 668]
gi|126241647|gb|ABO04740.1| putative KDPG/KHG aldolase [Burkholderia mallei NCTC 10247]
gi|134248583|gb|EBA48666.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 305]
gi|147747000|gb|EDK54077.1| putative KDPG/KHG aldolase [Burkholderia mallei FMH]
gi|147751989|gb|EDK59056.1| putative KDPG/KHG aldolase [Burkholderia mallei JHU]
gi|184211147|gb|EDU08190.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 1655]
gi|237502977|gb|ACQ95295.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei MSHR346]
gi|238524943|gb|EEP88373.1| keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate
aldolase [Burkholderia mallei GB8 horse 4]
gi|243065253|gb|EES47439.1| putative KDPG/KHG aldolase [Burkholderia mallei PRL-20]
Length = 229
Score = 38.6 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 92 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 144
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 145 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 193
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 194 GLGSALY-APGQTSAVTAVRA 213
>gi|212224214|ref|YP_002307450.1| geranylgeranylglyceryl phosphate synthase-like protein
[Thermococcus onnurineus NA1]
gi|212009171|gb|ACJ16553.1| geranylgeranylglyceryl diphosphate synthase [Thermococcus
onnurineus NA1]
Length = 255
Score = 38.6 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
I K +I + L V GG+ + K+ V+AGAD++V G++
Sbjct: 186 QPVPPEMIALVKKVID---VPLIVGGGIRSEEQAKTAVKAGADIIVTGTAIEKAGSLEEA 242
Query: 210 AKRLNDL 216
RL +
Sbjct: 243 KNRLESI 249
>gi|167721267|ref|ZP_02404503.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei DM98]
gi|167920532|ref|ZP_02507623.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei BCC215]
Length = 229
Score = 38.6 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 92 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 144
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 145 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 193
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 194 GLGSALY-APGQTSAVTAVRA 213
>gi|41018273|sp|Q7NNK8|THIE_GLOVI RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
Length = 341
Score = 38.6 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGE 206
Q + +R + I + ++ GG+ N+++++ AGA+ + VV + +
Sbjct: 272 QGRTPVGLEYVRHCRESIERPGFAI---GGIDRSNLEAVIAAGAERIAVV-RAIMAAEDP 327
Query: 207 IS----YAKRLN 214
+ +RLN
Sbjct: 328 GRTTAWFLERLN 339
>gi|162210035|ref|YP_334858.2| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei 1710b]
Length = 209
Score = 38.6 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 72 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 124
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 125 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 173
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 174 GLGSALY-APGQTSAVTAVRA 193
>gi|254254259|ref|ZP_04947576.1| hypothetical protein BDAG_03554 [Burkholderia dolosa AUO158]
gi|124898904|gb|EAY70747.1| hypothetical protein BDAG_03554 [Burkholderia dolosa AUO158]
Length = 232
Score = 38.6 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSF 200
P G++L + +A + L +GG+ + +++ GAD++VVGS+
Sbjct: 156 TPDTAGRRLSDHDFAHFSALRAATTR--CPLVAEGGIGQPAHAARVLELGADVVVVGSAI 213
>gi|76810084|ref|YP_332544.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
1710b]
gi|167844663|ref|ZP_02470171.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
B7210]
gi|167893193|ref|ZP_02480595.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
7894]
gi|167909895|ref|ZP_02496986.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
112]
gi|167917918|ref|ZP_02505009.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
BCC215]
gi|217419742|ref|ZP_03451248.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei 576]
gi|254190876|ref|ZP_04897383.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
Pasteur 52237]
gi|254258119|ref|ZP_04949173.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei 1710a]
gi|76579537|gb|ABA49012.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
1710b]
gi|157938551|gb|EDO94221.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
Pasteur 52237]
gi|217397046|gb|EEC37062.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei 576]
gi|254216808|gb|EET06192.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei 1710a]
Length = 294
Score = 38.6 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N E PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 198 AAFALNAEVPVQIEVETLDQLRTALAH----GARSVLLDNFTLDMMRDAVRVTEGRAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 253 EVSGGVNFDTVRAIAETGVD 272
>gi|307298827|ref|ZP_07578629.1| Orotidine 5'-phosphate decarboxylase [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306915252|gb|EFN45637.1| Orotidine 5'-phosphate decarboxylase [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 218
Score = 38.6 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
KI + ++ + + V GG++ N+ + D+++ G S + + A ++
Sbjct: 155 KKIEIIRRVLPE--AKIAVAGGISPDNLSHVFPLKPDVVIAGRSIWEAEDPARVAFQIK 211
>gi|284040478|ref|YP_003390408.1| geranylgeranylglyceryl phosphate synthase [Spirosoma linguale DSM
74]
gi|283819771|gb|ADB41609.1| geranylgeranylglyceryl phosphate synthase [Spirosoma linguale DSM
74]
Length = 249
Score = 38.6 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLL 194
+ +M ++ G G + + I + + ++ + V GG+T ++AGAD++
Sbjct: 165 LQLMYLDAGSGAR--RPVSAAMIAAVRKAV---NVPIIVGGGITSGEKAYEALKAGADMI 219
Query: 195 VVGSSF 200
VVG+
Sbjct: 220 VVGNGV 225
>gi|222445214|ref|ZP_03607729.1| hypothetical protein METSMIALI_00842 [Methanobrevibacter smithii
DSM 2375]
gi|222434779|gb|EEE41944.1| hypothetical protein METSMIALI_00842 [Methanobrevibacter smithii
DSM 2375]
Length = 209
Score = 38.6 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H S + R++ K GV+ + D D I + V P +
Sbjct: 83 VHVGQSDMPAKIARSMIGEDKILGVSAANIK--EAKKAQRDSADYIGVGAVYP--TNTKD 138
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISY 209
+++PK ++ K ++ I + GG+T N L G D L VV S+ K
Sbjct: 139 DATSVPK-KELKEIVKSVDIPVVAIGGITQENAHELNDCGIDGLSVV-SAIMEAKNPKIA 196
Query: 210 AKRL 213
+K L
Sbjct: 197 SKNL 200
>gi|146342550|ref|YP_001207598.1| thiamine phosphate pyrophosphorylase [Bradyrhizobium sp. ORS278]
gi|146195356|emb|CAL79381.1| thiamine phosphate pyrophosphorylase (thiamin phosphate
synthase/diphosphorylase) [Bradyrhizobium sp. ORS278]
Length = 202
Score = 38.6 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H ++ I G G++ + + + + + D + + + P
Sbjct: 74 HVHLGQEDLAEADVKAIKDAGLTLGLSTHDDAELET--ALAAKPDYVALGPIFPTTLKAM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ IPKI K +G SI L GG+ + AGAD + V S +
Sbjct: 132 RFAPQGIPKISVWKQRVG--SIPLVAIGGIKLEQAAEIFAAGADSIAVVSDVTQNADPDA 189
Query: 209 YAKRLND 215
+ D
Sbjct: 190 RVRAWLD 196
>gi|328770115|gb|EGF80157.1| hypothetical protein BATDEDRAFT_11553 [Batrachochytrium
dendrobatidis JAM81]
Length = 263
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF-NQKGEISYAKRLND 215
L++ GG+T N ++ + AGAD ++V S F N K + + L++
Sbjct: 80 LQIGGGITLDNAETWIDAGADKIIVTSWLFQNAKFDEDRLRLLSE 124
>gi|226361320|ref|YP_002779098.1| thiamine-phosphate pyrophosphorylase [Rhodococcus opacus B4]
gi|226239805|dbj|BAH50153.1| thiamine-phosphate pyrophosphorylase [Rhodococcus opacus B4]
Length = 232
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GG+ + ++ AGAD +VV + + + A+ L+ L
Sbjct: 186 IGGIDESRVPEILAAGADRIVVVRAITEARDPQAAARSLSAL 227
>gi|217421171|ref|ZP_03452676.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 576]
gi|254199137|ref|ZP_04905552.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei S13]
gi|169656967|gb|EDS88364.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei S13]
gi|217396583|gb|EEC36600.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 576]
Length = 229
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 92 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 144
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 145 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 193
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 194 GLGSALY-APGQTSAVTAVRA 213
>gi|169829325|ref|YP_001699483.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Lysinibacillus
sphaericus C3-41]
gi|168993813|gb|ACA41353.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Lysinibacillus
sphaericus C3-41]
Length = 259
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L+V GG+T+ N + + AGA ++V S F G + +RL L K
Sbjct: 78 LQVGGGITAANAQKYIDAGASHVIVTSYIF-HDGRLD-LERLQHLNK 122
>gi|15893786|ref|NP_347135.1| thiamine monophosphate syntase [Clostridium acetobutylicum ATCC
824]
gi|24212505|sp|Q97LQ9|THIE_CLOAB RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|15023356|gb|AAK78475.1|AE007564_3 Thiamine monophosphate syntase [Clostridium acetobutylicum ATCC
824]
gi|325507909|gb|ADZ19545.1| Thiamine monophosphate syntase [Clostridium acetobutylicum EA 2018]
Length = 211
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ + K + I + GG+ N +++ G D + V S + + A+ + D+
Sbjct: 146 LEELKNIKNSVKIPVVGIGGINEENANKVIETGVDGISVISGILSAQKIKDKARVMFDIV 205
Query: 218 K 218
K
Sbjct: 206 K 206
>gi|312135397|ref|YP_004002735.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
owensensis OL]
gi|311775448|gb|ADQ04935.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
owensensis OL]
Length = 488
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
D ++ + A D+I T H S + +++ I + V D
Sbjct: 229 KDTDERVDALVKAQVDVIVVDTAHG-HSKGVIETVKRIKSRYPHIQVVAGNIATAEAARD 287
Query: 129 VIDEIDMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I+ + + + PG G + I I + + I + DGG+
Sbjct: 288 LIEAGADCVKVGIGPGSICTTRVVAGIGV--PQITAIMDVAKVAKEYGIPVIADGGIRYS 345
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGAD++++GS
Sbjct: 346 GDITKALAAGADVVMIGS 363
>gi|171915035|ref|ZP_02930505.1| thiamine-phosphate pyrophosphorylase [Verrucomicrobium spinosum DSM
4136]
Length = 212
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ + I + A + GGV + +V+AGA +VV S++ +
Sbjct: 142 YVPIGLQDIAEVHAFATCPVFCI---GGVNPERLPEIVEAGAKRVVVVSAWLQAEDVRGA 198
Query: 210 AKRLNDLK 217
+ L L+
Sbjct: 199 VEALRWLR 206
>gi|37519972|ref|NP_923349.1| thiamine-phosphate pyrophosphorylase [Gloeobacter violaceus PCC
7421]
gi|35210964|dbj|BAC88344.1| thiE [Gloeobacter violaceus PCC 7421]
Length = 366
Score = 38.6 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGE 206
Q + +R + I + ++ GG+ N+++++ AGA+ + VV + +
Sbjct: 297 QGRTPVGLEYVRHCRESIERPGFAI---GGIDRSNLEAVIAAGAERIAVV-RAIMAAEDP 352
Query: 207 IS----YAKRLN 214
+ +RLN
Sbjct: 353 GRTTAWFLERLN 364
>gi|170719823|ref|YP_001747511.1| thiamine-phosphate pyrophosphorylase [Pseudomonas putida W619]
gi|229558559|sp|B1J1Y7|THIE_PSEPW RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|169757826|gb|ACA71142.1| thiamine-phosphate pyrophosphorylase [Pseudomonas putida W619]
Length = 207
Score = 38.6 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 21/56 (37%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
G+ + + V GG+T N LV GADLL V F +R
Sbjct: 146 LAQARGQVKLPIAVIGGITLDNAAPLVAHGADLLAVIHGLFGADSAQEVTRRARAF 201
>gi|53726236|ref|YP_103799.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei ATCC
23344]
gi|67641258|ref|ZP_00440040.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
mallei GB8 horse 4]
gi|121601012|ref|YP_993947.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei SAVP1]
gi|124383426|ref|YP_001027012.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei NCTC
10229]
gi|126448536|ref|YP_001081635.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei NCTC
10247]
gi|134281265|ref|ZP_01767974.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
305]
gi|166998908|ref|ZP_02264760.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
mallei PRL-20]
gi|167901646|ref|ZP_02488851.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
NCTC 13177]
gi|237811177|ref|YP_002895628.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei MSHR346]
gi|254175387|ref|ZP_04882047.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei ATCC
10399]
gi|254196288|ref|ZP_04902712.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
S13]
gi|254202501|ref|ZP_04908864.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei FMH]
gi|254207836|ref|ZP_04914186.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei JHU]
gi|254356269|ref|ZP_04972545.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei
2002721280]
gi|52429659|gb|AAU50252.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei ATCC
23344]
gi|121229822|gb|ABM52340.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei SAVP1]
gi|124291446|gb|ABN00715.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
mallei NCTC 10229]
gi|126241406|gb|ABO04499.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
mallei NCTC 10247]
gi|134247571|gb|EBA47656.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
305]
gi|147746748|gb|EDK53825.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei FMH]
gi|147751730|gb|EDK58797.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei JHU]
gi|148025266|gb|EDK83420.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei
2002721280]
gi|160696431|gb|EDP86401.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia mallei ATCC
10399]
gi|169653031|gb|EDS85724.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
S13]
gi|237505129|gb|ACQ97447.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei MSHR346]
gi|238522156|gb|EEP85602.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
mallei GB8 horse 4]
gi|243064988|gb|EES47174.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
mallei PRL-20]
Length = 294
Score = 38.6 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N + PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 198 AAFALNADVPVQIEVETLDQLRTALAH----GARSVLLDNFTLDMMRDAVRVTEGRAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 253 EVSGGVNFDTVRAIAETGVD 272
>gi|319405338|emb|CBI78956.1| thiamine-phosphate pyrophosphorylase [Bartonella sp. AR 15-3]
Length = 201
Score = 38.6 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 73/203 (35%), Gaps = 20/203 (9%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G K I + D I I+ ++ + L+I+
Sbjct: 12 SADW------VERLVPFGIKLIQLRIKD-EDTETI---IQHIKRAKNICNKFK-AQLVIN 60
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ I D CD I H + I K G++ + E + I + E
Sbjct: 61 D---YWKIAIDEKCDFI--HLGQDDLKNADILAIRKSDIKLGLSTHDEHELDISLSISPE 115
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ L F + + KI+Q + IG S+ L GG+T +++ GA+
Sbjct: 116 Y-IALGPIYPTIFKKMKWAPQGLEKIKQWRKKIG--SLPLVGIGGLTPERAINILTVGAN 172
Query: 193 -LLVVGSSFFNQKGEISYAKRLN 214
VV N+K E + +
Sbjct: 173 SAAVVTDVILNKKPEERVQQWIK 195
>gi|302333737|gb|ADL23930.1| putative thiamine-phosphate pyrophosphorylase [Staphylococcus
aureus subsp. aureus JKD6159]
Length = 213
Score = 38.6 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K + + + + GG+ + N+ +V+AGA+ + V S+ + R D
Sbjct: 152 EMIATFKEMNPQ--LPIVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKD 209
Query: 216 L 216
Sbjct: 210 F 210
>gi|17988019|ref|NP_540653.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis bv. 1
str. 16M]
gi|23501121|ref|NP_697248.1| thiamine-phosphate pyrophosphorylase [Brucella suis 1330]
gi|161618195|ref|YP_001592082.1| thiamine-phosphate pyrophosphorylase [Brucella canis ATCC 23365]
gi|163842479|ref|YP_001626883.1| thiamine-phosphate pyrophosphorylase [Brucella suis ATCC 23445]
gi|225626745|ref|ZP_03784784.1| Thiamine-phosphate pyrophosphorylase [Brucella ceti str. Cudo]
gi|225851741|ref|YP_002731974.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis ATCC
23457]
gi|254690509|ref|ZP_05153763.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 6 str.
870]
gi|254694998|ref|ZP_05156826.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 3 str.
Tulya]
gi|254701012|ref|ZP_05162840.1| thiamine-phosphate pyrophosphorylase [Brucella suis bv. 5 str. 513]
gi|254705388|ref|ZP_05167216.1| thiamine-phosphate pyrophosphorylase [Brucella suis bv. 3 str. 686]
gi|254709356|ref|ZP_05171167.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis B2/94]
gi|254713223|ref|ZP_05175034.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M644/93/1]
gi|254716423|ref|ZP_05178234.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M13/05/1]
gi|256030879|ref|ZP_05444493.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis
M292/94/1]
gi|256046001|ref|ZP_05448873.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis bv. 1
str. Rev.1]
gi|256060346|ref|ZP_05450519.1| thiamine-phosphate pyrophosphorylase [Brucella neotomae 5K33]
gi|256112714|ref|ZP_05453635.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis bv. 3
str. Ether]
gi|256158912|ref|ZP_05456759.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M490/95/1]
gi|256254283|ref|ZP_05459819.1| thiamine-phosphate pyrophosphorylase [Brucella ceti B1/94]
gi|256258766|ref|ZP_05464302.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 9 str.
C68]
gi|256264745|ref|ZP_05467277.1| thiamine monophosphate synthase [Brucella melitensis bv. 2 str.
63/9]
gi|256368675|ref|YP_003106181.1| thiamine-phosphate pyrophosphorylase [Brucella microti CCM 4915]
gi|260169781|ref|ZP_05756592.1| thiamine-phosphate pyrophosphorylase [Brucella sp. F5/99]
gi|260563281|ref|ZP_05833767.1| thiamine monophosphate synthase [Brucella melitensis bv. 1 str.
16M]
gi|260567155|ref|ZP_05837625.1| thiamine monophosphate synthase [Brucella suis bv. 4 str. 40]
gi|260756068|ref|ZP_05868416.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 6 str.
870]
gi|260885090|ref|ZP_05896704.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 9 str.
C68]
gi|261215343|ref|ZP_05929624.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 3 str.
Tulya]
gi|261218209|ref|ZP_05932490.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M13/05/1]
gi|261221438|ref|ZP_05935719.1| thiamine-phosphate pyrophosphorylase [Brucella ceti B1/94]
gi|261316868|ref|ZP_05956065.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis B2/94]
gi|261320943|ref|ZP_05960140.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M644/93/1]
gi|261324325|ref|ZP_05963522.1| thiamine-phosphate pyrophosphorylase [Brucella neotomae 5K33]
gi|261751537|ref|ZP_05995246.1| thiamine-phosphate pyrophosphorylase [Brucella suis bv. 5 str. 513]
gi|261756103|ref|ZP_05999812.1| thiamine-phosphate pyrophosphorylase [Brucella suis bv. 3 str. 686]
gi|261759326|ref|ZP_06003035.1| thiamine monophosphate synthase [Brucella sp. F5/99]
gi|265987938|ref|ZP_06100495.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis
M292/94/1]
gi|265992412|ref|ZP_06104969.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis bv. 1
str. Rev.1]
gi|265994155|ref|ZP_06106712.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis bv. 3
str. Ether]
gi|265997400|ref|ZP_06109957.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M490/95/1]
gi|297247600|ref|ZP_06931318.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 5 str.
B3196]
gi|17983764|gb|AAL52917.1| thiamin-phosphate pyrophosphorylase [Brucella melitensis bv. 1 str.
16M]
gi|23346993|gb|AAN29163.1| thiamine-phosphate pyrophosphorylase, putative [Brucella suis 1330]
gi|161335006|gb|ABX61311.1| Thiamine-phosphate pyrophosphorylase [Brucella canis ATCC 23365]
gi|163673202|gb|ABY37313.1| Thiamine-phosphate pyrophosphorylase [Brucella suis ATCC 23445]
gi|225618402|gb|EEH15445.1| Thiamine-phosphate pyrophosphorylase [Brucella ceti str. Cudo]
gi|225640106|gb|ACO00020.1| Thiamine-phosphate pyrophosphorylase [Brucella melitensis ATCC
23457]
gi|255998833|gb|ACU47232.1| thiamine-phosphate pyrophosphorylase [Brucella microti CCM 4915]
gi|260153297|gb|EEW88389.1| thiamine monophosphate synthase [Brucella melitensis bv. 1 str.
16M]
gi|260156673|gb|EEW91753.1| thiamine monophosphate synthase [Brucella suis bv. 4 str. 40]
gi|260676176|gb|EEX62997.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 6 str.
870]
gi|260874618|gb|EEX81687.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 9 str.
C68]
gi|260916950|gb|EEX83811.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 3 str.
Tulya]
gi|260920022|gb|EEX86675.1| thiamine-phosphate pyrophosphorylase [Brucella ceti B1/94]
gi|260923298|gb|EEX89866.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M13/05/1]
gi|261293633|gb|EEX97129.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M644/93/1]
gi|261296091|gb|EEX99587.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis B2/94]
gi|261300305|gb|EEY03802.1| thiamine-phosphate pyrophosphorylase [Brucella neotomae 5K33]
gi|261739310|gb|EEY27306.1| thiamine monophosphate synthase [Brucella sp. F5/99]
gi|261741290|gb|EEY29216.1| thiamine-phosphate pyrophosphorylase [Brucella suis bv. 5 str. 513]
gi|261745856|gb|EEY33782.1| thiamine-phosphate pyrophosphorylase [Brucella suis bv. 3 str. 686]
gi|262551868|gb|EEZ07858.1| thiamine-phosphate pyrophosphorylase [Brucella ceti M490/95/1]
gi|262765136|gb|EEZ11057.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis bv. 3
str. Ether]
gi|263003478|gb|EEZ15771.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis bv. 1
str. Rev.1]
gi|263095155|gb|EEZ18824.1| thiamine monophosphate synthase [Brucella melitensis bv. 2 str.
63/9]
gi|264660135|gb|EEZ30396.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis
M292/94/1]
gi|297174769|gb|EFH34116.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 5 str.
B3196]
gi|326408235|gb|ADZ65300.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis M28]
gi|326537951|gb|ADZ86166.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis M5-90]
Length = 203
Score = 38.6 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 21/183 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G + + V D + IR+ R + DC L+++
Sbjct: 13 SADW------LERMVPLGIRLVQLRVKDKADAQLRA----EIRAARDICAAH-DCQLIVN 61
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + D GCD I E L I A G K GV+ + E + V
Sbjct: 62 D---YWKLALDEGCDFIHLGQEDLDGAD--LDAIRAGGLKLGVSSHDEAELDRALSVRP- 115
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + + P + + E +P++ + KA IG +I L GG++ + AGA
Sbjct: 116 -DYIALGPIYPTILKKMKWHEQGLPRLGEWKARIG--NIPLVGIGGLSVERAPGVFAAGA 172
Query: 192 DLL 194
D++
Sbjct: 173 DIV 175
>gi|239637385|ref|ZP_04678367.1| thiamine-phosphate pyrophosphorylase [Staphylococcus warneri
L37603]
gi|239596985|gb|EEQ79500.1| thiamine-phosphate pyrophosphorylase [Staphylococcus warneri
L37603]
Length = 213
Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I Q + +G + GG+ N+ + AGAD + V S+ +
Sbjct: 153 DMITQLRQKMG--DFPMVAIGGINEENVALIANAGADGISVISAISKSNNIDNTVNEFKK 210
>gi|319400118|gb|EFV88354.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis FRI909]
Length = 210
Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q +S + +R K++I ++ + V GG+ IK +V DL++VG
Sbjct: 131 IAVHTGYDLQAEGKSPLDSLRTVKSVI--KNSKVAVAGGIKPDTIKDIVAEDPDLVIVGG 188
Query: 199 SFFNQKGEISYAKRLND 215
N + AK+
Sbjct: 189 GIANADDPVKAAKQCRA 205
>gi|313672454|ref|YP_004050565.1| thiazole-phosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939210|gb|ADR18402.1| thiazole-phosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 258
Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQ 188
++EI + +M + G + I++T + +I + ++ + VD G+ + ++
Sbjct: 144 LEEIGCVTVMPLGAPIGSNRGIKTT----ENLRIIIEQSNVPVVVDAGIGAPSHAALALE 199
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GAD ++V ++ + AK ++A
Sbjct: 200 MGADAVLVNTAIATADNPVEMAKAFKYAVEAA 231
>gi|91777011|ref|YP_546767.1| thiamine-phosphate pyrophosphorylase [Methylobacillus flagellatus
KT]
gi|122985345|sp|Q1GXW1|THIE_METFK RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|91710998|gb|ABE50926.1| thiamine-phosphate diphosphorylase [Methylobacillus flagellatus KT]
Length = 209
Score = 38.6 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDL 216
A + + + GG+T N ++ AGAD + V+G + + + A++ + L
Sbjct: 151 ALFAKARELGLPIVAIGGITLDNAAGIISAGADAVAVIG-ALWTAADIEARARQFHQL 207
>gi|126452781|ref|YP_001067725.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei 1106a]
gi|242314352|ref|ZP_04813368.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 1106b]
gi|126226423|gb|ABN89963.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 1106a]
gi|242137591|gb|EES23993.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 1106b]
Length = 229
Score = 38.6 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 92 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 144
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 145 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 193
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 194 GLGSALY-APGQTSAVTAVRA 213
>gi|319891474|ref|YP_004148349.1| Pyridoxine biosynthesis glutamine amidotransferase, synthase
subunit [Staphylococcus pseudintermedius HKU10-03]
gi|317161170|gb|ADV04713.1| Pyridoxine biosynthesis glutamine amidotransferase, synthase
subunit [Staphylococcus pseudintermedius HKU10-03]
gi|323465356|gb|ADX77509.1| pyridoxine biosynthesis protein [Staphylococcus pseudintermedius
ED99]
Length = 295
Score = 38.6 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + ++AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPETFAKAI 252
>gi|309777198|ref|ZP_07672161.1| 3-hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
3_1_53]
gi|308915068|gb|EFP60845.1| 3-hexulose-6-phosphate synthase [Erysipelotrichaceae bacterium
3_1_53]
Length = 210
Score = 38.6 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
I+ V+ G Q + ++ K + +S V GG+ I V D+++V
Sbjct: 129 HIVAVHVGADQQAAGREPLQDLKLMKQCVKAAGVS--VAGGINGNTISDYVALEPDIVIV 186
Query: 197 GSSFFNQKGEISYAKRL 213
GS + + + A+R+
Sbjct: 187 GSGITHAQDPVREAERI 203
>gi|282849217|ref|ZP_06258602.1| thiamine-phosphate diphosphorylase [Veillonella parvula ATCC 17745]
gi|282580921|gb|EFB86319.1| thiamine-phosphate diphosphorylase [Veillonella parvula ATCC 17745]
Length = 505
Score = 38.6 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+I + +A ++ GG+T N ++QAGA + V S+ + A+
Sbjct: 438 PCGPDRITELRA--EGLTLPCVGIGGITLDNATPVLQAGASGVAVISAIAHADDPYEAAE 495
Query: 212 RLNDL 216
+L
Sbjct: 496 EFKNL 500
>gi|330684777|gb|EGG96470.1| thiamine-phosphate diphosphorylase [Staphylococcus epidermidis
VCU121]
Length = 213
Score = 38.6 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I+Q + +GK + GG+T N+ + AGAD + V S+ +
Sbjct: 153 DMIKQLRQKMGK--FPMVAIGGITEDNVGLIANAGADGISVISAISRSNNIDNTVNEFKK 210
>gi|294495861|ref|YP_003542354.1| tryptophan synthase subunit alpha [Methanohalophilus mahii DSM
5219]
gi|292666860|gb|ADE36709.1| tryptophan synthase, alpha chain [Methanohalophilus mahii DSM 5219]
Length = 257
Score = 38.6 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 17/154 (11%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
++ + A+AG + + G + P T L+ + +
Sbjct: 108 ENFVKRCAEAGISGLIIPDLPLHEADELIEICKEEGIDNIFLVAPNTSDQRLDAISSKSS 167
Query: 135 MILIMTVNPGFGGQQLIEST-----IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+ + G G+ S+ + KI IS ++++ +V A
Sbjct: 168 GFIYVVSKLGVTGEGKNISSNVAGLLDKINSTLPKAVGFGIS-------NRKHVEEMVAA 220
Query: 190 GADLLVVGSSFFN----QKGEISYAKRL-NDLKK 218
GAD ++VGS+ N + I K + DLK+
Sbjct: 221 GADAVIVGSALVNIIASKDDVIPRLKEITKDLKE 254
>gi|207094041|ref|ZP_03241828.1| ribulose-phosphate 3-epimerase [Helicobacter pylori
HPKX_438_AG0C1]
Length = 36
Score = 38.6 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 45 PNISFGADVIRSLRSYSDSVFDCHLMISSIDSHI 78
PN++ G V+ ++ S D HLM+ + +
Sbjct: 2 PNLTMGPVVLENITQMSQVPLDVHLMVENASFFV 35
>gi|322701614|gb|EFY93363.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Metarhizium acridum CQMa 102]
Length = 259
Score = 38.6 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
AK + L+V GG+ +N K V AGA +++ S F
Sbjct: 68 AKQALQAWPGHLQVGGGINDKNAKEWVDAGASKVIITSYLF 108
>gi|146303012|ref|YP_001190328.1| orotidine 5'-phosphate decarboxylase [Metallosphaera sedula DSM
5348]
gi|145701262|gb|ABP94404.1| 3-hexulose-6-phosphate synthase [Metallosphaera sedula DSM 5348]
Length = 227
Score = 38.6 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ + G Q+ T+ +++ GK + + V GG++ + I L + + V
Sbjct: 139 VDIVGFHIGLDVQKKRGVTVADLKEEIREAGKYGL-ISVAGGLSPKTIPELAELPISIYV 197
Query: 196 VGSSFFNQKGEISYAKRLNDL 216
VG + A+ + +
Sbjct: 198 VGGAITRSSTPRKVAEEIIKI 218
>gi|196229647|ref|ZP_03128511.1| thiamine-phosphate pyrophosphorylase [Chthoniobacter flavus
Ellin428]
gi|196225973|gb|EDY20479.1| thiamine-phosphate pyrophosphorylase [Chthoniobacter flavus
Ellin428]
Length = 218
Score = 38.6 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I + + + GG+ N+ ++++AGA +V+ S +YA+R
Sbjct: 154 LENIARIHETVQIPIFCI---GGIKWENLDAIIEAGARRVVIVSGLLQAPDIAAYARRAK 210
Query: 215 D 215
+
Sbjct: 211 E 211
>gi|86749078|ref|YP_485574.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
HaA2]
gi|86572106|gb|ABD06663.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
HaA2]
Length = 202
Score = 38.6 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 43/128 (33%), Gaps = 5/128 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H L I A G G++ + + + + D I + + P
Sbjct: 74 HLHLGQEDLATADLHEIRAAGLTLGLSTHDDAELET--ALAARPDYIALGPIFPTTLKSM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ IPKI K +G SI L GG+ + + AGAD + V S +
Sbjct: 132 RFAPQGIPKITDWKQRVG--SIPLVAIGGIKLEQAEEIFAAGADSIAVVSDVTQNPDPDA 189
Query: 209 YAKRLNDL 216
+ D
Sbjct: 190 RVRAWLDF 197
>gi|300121921|emb|CBK22495.2| unnamed protein product [Blastocystis hominis]
Length = 443
Score = 38.6 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + SI + GGVT+ N + ++ GA + V+ S+ F + AK L D +
Sbjct: 383 LRRVCEAVSIPVVSIGGVTAGNAGATMKEGAVGVAVI-SAIFGRSDVKEAAKELRDAVEK 441
Query: 220 AL 221
AL
Sbjct: 442 AL 443
>gi|110634906|ref|YP_675114.1| thiamine-phosphate pyrophosphorylase [Mesorhizobium sp. BNC1]
gi|110285890|gb|ABG63949.1| thiamine-phosphate diphosphorylase [Chelativorans sp. BNC1]
Length = 206
Score = 38.6 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 11/163 (6%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
IR R + DC L+++ + + + GCD H L I G K
Sbjct: 43 IRRARKIC-AGHDCQLIVND---YWQLAIEEGCDF--VHLGQEDLATADLAAIKRAGLKF 96
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISL 172
G++ + T +A E D I + + P + + + +I + K + + L
Sbjct: 97 GISTHDHTELATALK--AEPDYIALGPIYPTILKKMKWEPQGLDRIAEWKERVA--PVPL 152
Query: 173 EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+T I + + GAD V + + + +
Sbjct: 153 VAIGGLTPERIPGVFERGADSAAVVTDILRNSNPEARTREWLE 195
>gi|308274116|emb|CBX30715.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carbox [uncultured Desulfobacterium sp.]
Length = 244
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 81/218 (37%), Gaps = 21/218 (9%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
+ + D S + ++ K GA+ IH +DG F + I+ + S +
Sbjct: 27 VFSDDPSAMAQKW---EKQGAELIHVVDLDGAFEKS-PVNLLAIKKILSCAKVDIQVGGG 82
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
I + ++ + D G I E+ + + + V I+ + + +E
Sbjct: 83 IRN-ENTAKMFFDIGVKRIVIGTEAHKNPKWVKNICRQYPSRVVVGIDAKNGLVAIEGWT 141
Query: 131 DEIDMILI--------MTVNPGFGGQQLIE--STIPKIRQAKALIGKRSISLEVDGGVTS 180
+ M + +V + T P I + + L +I + GGV++
Sbjct: 142 ETTGMKAVDLAKNYEDCSVAAINFTDIYRDGMQTGPNIEETRRLAEAVNIPVVASGGVST 201
Query: 181 ----RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+N+ S+ + G ++ G + ++ G + + + L
Sbjct: 202 IEDIKNLLSIEKFGVTGVITGKAIYS--GSLDFREALK 237
>gi|304404084|ref|ZP_07385746.1| thiamine-phosphate pyrophosphorylase [Paenibacillus curdlanolyticus
YK9]
gi|304347062|gb|EFM12894.1| thiamine-phosphate pyrophosphorylase [Paenibacillus curdlanolyticus
YK9]
Length = 233
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + GG+ N + ++ AGAD + V ++ + E S K L+D
Sbjct: 172 IPIVGIGGIRPDNAEQVIGAGADGVSVITAITHAGDERSATKALSD 217
>gi|134093546|ref|YP_001098621.1| putative thiamine-phosphate pyrophosphorylase (TMP
pyrophosphorylase) (TMP-PPase) (thiamine-phosphate
synthase) (ThiE) [Herminiimonas arsenicoxydans]
gi|133737449|emb|CAL60492.1| Thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase)
(TMP-PPase) (Thiamine-phosphate synthase) (ThiE)
[Herminiimonas arsenicoxydans]
Length = 203
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
V GG+T N LV+ GAD++ SS + + A+ +L
Sbjct: 158 VIGGMTKENAAPLVRNGADMVAAISSIYLAGDPQAAARAFVNL 200
>gi|188532950|ref|YP_001906747.1| quinolinate phosphoribosyltransferase [Erwinia tasmaniensis Et1/99]
gi|188027992|emb|CAO95849.1| Nicotinate-nucleotide pyrophosphorylase [Erwinia tasmaniensis
Et1/99]
Length = 296
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI 155
HI A+ K + +P+ PV I + ++E++ L G L T+
Sbjct: 186 ENHIIACGSIAKAIEKACWL--HPDVPVEIEVESLEELEQAL----QAGADIVMLDNFTV 239
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
++R A L R++ LEV G VT + +++ + G D + VG
Sbjct: 240 EQMRDAVKLSDNRAL-LEVSGNVTDQTLRTFAETGVDYISVG 280
>gi|158428202|pdb|2DZX|A Chain A, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(E131- 132a) From A Hyperthermophile, Pyrococcus
Furiosus
gi|158428203|pdb|2DZX|B Chain B, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(E131- 132a) From A Hyperthermophile, Pyrococcus
Furiosus
Length = 248
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
+++ R +S + + + + + +G D I H +
Sbjct: 69 FWIVKEFRRHSSTPI-VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
A G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IARAAGIKTVFLAAPNTPDERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
+L
Sbjct: 243 EEL 245
>gi|113955087|ref|YP_731335.1| N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus sp.
CC9311]
gi|113882438|gb|ABI47396.1| N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus sp.
CC9311]
Length = 233
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 72/188 (38%), Gaps = 22/188 (11%)
Query: 50 GADVIRSLRSYSD----------SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI 99
+ IR++R+ + D + I+ + I + AG D+I + P
Sbjct: 50 SPEHIRAVRNRCPDALIIGLWKRTFPDSSVYITPRWNDIQTVWAAGADVIALDATARPRP 109
Query: 100 RR--SLRTIHAMGKKTGVAINPETPVAILED--VIDEIDMILIMTVNPGFGGQ--QLIES 153
R I + G + + V +E+ + + + T G+ Q QL
Sbjct: 110 DREDLAELIQRSKEDLGAPLMAD--VDSIENGLIAASLGCEWVGTTLYGYTEQTAQLTPP 167
Query: 154 TIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
I + + + + +GG+ + + + GADL+VVG++ ++ AK
Sbjct: 168 GYGLISPLRDQLPDQVTLIC-EGGIQSPDSALQALGNGADLVVVGTAI--TGVDLQVAKY 224
Query: 213 LNDLKKSA 220
L LK+ +
Sbjct: 225 LRTLKRQS 232
>gi|254181489|ref|ZP_04888086.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
1655]
gi|184212027|gb|EDU09070.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
1655]
Length = 294
Score = 38.6 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N + PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 198 AAFALNADVPVQIEVETLDQLRTALAH----GARSVLLDNFTLDMMRDAVRVTEGRAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 253 EVSGGVNFDTVRAIAETGVD 272
>gi|315660248|ref|ZP_07913103.1| thiamine-phosphate diphosphorylase [Staphylococcus lugdunensis
M23590]
gi|315494675|gb|EFU83015.1| thiamine-phosphate diphosphorylase [Staphylococcus lugdunensis
M23590]
Length = 212
Score = 38.2 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
I + IG + GGVT N +++V AGAD + V S+
Sbjct: 152 EMILTLRKEIG--DFPIVAIGGVTENNAQAVVDAGADGISVISAI 194
>gi|289550292|ref|YP_003471196.1| Thiamin-phosphate pyrophosphorylase [Staphylococcus lugdunensis
HKU09-01]
gi|289179824|gb|ADC87069.1| Thiamin-phosphate pyrophosphorylase [Staphylococcus lugdunensis
HKU09-01]
Length = 212
Score = 38.2 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
I + IG + GGVT N +++V AGAD + V S+
Sbjct: 152 EMILTLRKEIG--DFPIVAIGGVTENNAQAVVDAGADGISVISAI 194
>gi|167561863|ref|ZP_02354779.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia oklahomensis
EO147]
gi|167569085|ref|ZP_02361959.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia oklahomensis
C6786]
Length = 294
Score = 38.2 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N + PV I + ++++ L G L T+ +R A + R++ L
Sbjct: 198 AAFALNADVPVQIEVETLEQLRTALAH----GAQSVLLDNFTLDMMRDAVRITEGRAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ G D
Sbjct: 253 EVSGGVNFDTVRAIADTGVD 272
>gi|223040787|ref|ZP_03611054.1| ModD protein [Campylobacter rectus RM3267]
gi|222877977|gb|EEF13091.1| ModD protein [Campylobacter rectus RM3267]
Length = 280
Score = 38.2 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
+ + + + I +++L GG+ +N++ AGAD LV S+ + Q
Sbjct: 216 KFTPGAVKRAVDLRDKIA-PNVALIASGGINLKNVREFASAGADALVT-SAMYTQ 268
>gi|209968791|gb|ACJ02769.1| indole-3-glycerol phosphate lyase BX1 [Consolida orientalis]
Length = 315
Score = 38.2 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK 167
G + + P TP ++ ++ + + + G G S P+++ +
Sbjct: 186 KYGIEIVLLTTPITPKERMKKIVQVAQGFVYLVSSVGVTGA--RPSVNPRVQSLLQEXKE 243
Query: 168 RSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYA-KRLNDL 216
+ V G G++ ++K + + GAD ++VGS+ GE A + L +L
Sbjct: 244 VTNKPVVVGFGISKPEHVKQIARWGADGVIVGSAMVKLLGEAKTANEGLKEL 295
>gi|305662503|ref|YP_003858791.1| geranylgeranylglyceryl diphosphate synthase [Ignisphaera aggregans
DSM 17230]
gi|304377072|gb|ADM26911.1| geranylgeranylglyceryl diphosphate synthase [Ignisphaera aggregans
DSM 17230]
Length = 253
Score = 38.2 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
G G + + +R K I +I + GG+ +S + AGAD++V G+
Sbjct: 181 EAGSGAPKPVPP--EFVRVVKKAIED-TILIVG-GGIRSSEVALEIANAGADIIVTGTII 236
Query: 201 FNQKGEISYAKRLNDLKK 218
+K K ++ L++
Sbjct: 237 --EKDLERAIKIISSLRR 252
>gi|84489869|ref|YP_448101.1| tryptophan synthase subunit alpha [Methanosphaera stadtmanae DSM
3091]
gi|84373188|gb|ABC57458.1| TrpA [Methanosphaera stadtmanae DSM 3091]
Length = 269
Score = 38.2 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 73/208 (35%), Gaps = 30/208 (14%)
Query: 21 EEISNITKAGAKQIHF-----D-VMDGCFVPNISF-----------GADVIRSLRSYSDS 63
E + GA + D V DG V N ++ LR Y+D
Sbjct: 37 EIAKTLVDNGADALEIGFPFSDPVADGKSVQNADIRAFNSGMNIKKCIKFLKQLREYTDK 96
Query: 64 VFDCHLMISSIDSH-INIIAD----AGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
F L + + ++ I+ G + + + + + ++
Sbjct: 97 PFGLLLYYNLVYNYGIDAFYKKLSEIGVNAVLIADLPPEEADDVIEASNKYNIEEIFIVS 156
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLI--ESTIPKIRQAKALIGKRSISLEVDG 176
T L+ + + + + + G G + +T I++ + I L V G
Sbjct: 157 QATNNDRLKMITEIVGGFIYVASVMGTTGARSNVEHNTTDLIKRIRKHTD---IPLCV-G 212
Query: 177 -GVT-SRNIKSLVQAGADLLVVGSSFFN 202
G++ ++K ++ AGAD +VGS+ N
Sbjct: 213 FGISQPEHVKEVLDAGADGAIVGSALIN 240
>gi|329929833|ref|ZP_08283509.1| N-(5'phosphoribosyl)anthranilate isomerase [Paenibacillus sp. HGF5]
gi|328935811|gb|EGG32272.1| N-(5'phosphoribosyl)anthranilate isomerase [Paenibacillus sp. HGF5]
Length = 224
Score = 38.2 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 70 MISSID--SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP----V 123
++ + D ++ D++ H + SP R ++ + V+I + P +
Sbjct: 65 VLVNPDLSELAELLQKTALDVVQLHGQESPQFCREVKERFPVSVFKAVSIGSDRPEAERL 124
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN- 182
+ L+ ID++LI T +P +GG I + ++ I L V GG+ N
Sbjct: 125 SALDSYAGCIDVLLIDTYDPMYGGGSGKTFAWDLIPAYQQWAERQGIPLFVAGGLDPDNV 184
Query: 183 ---IKSLVQAGADL 193
I G D+
Sbjct: 185 AHLIGQYAPYGVDV 198
>gi|313126471|ref|YP_004036741.1| 2-isopropylmalate synthase [Halogeometricum borinquense DSM 11551]
gi|312292836|gb|ADQ67296.1| 2-isopropylmalate synthase [Halogeometricum borinquense DSM 11551]
Length = 349
Score = 38.2 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH 68
D + L E +S + AG ++ D C V + A++IR +R ++D+ D H
Sbjct: 105 DMTFLAEILSAVDDAGVDW--VNIPDTCGVATPTRFANLIREVRQHTDAHIDVH 156
>gi|320533879|ref|ZP_08034461.1| dihydroorotate oxidase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133905|gb|EFW26271.1| dihydroorotate oxidase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 351
Score = 38.2 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
H+ ++ D+ + I + + MG VA N ++ + E
Sbjct: 223 RHVPLLVKIAPDL------ADEDIDAVAQMVLDMGLDGVVATN-----TTIDHDLGEG-- 269
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLL 194
G G L+ + +R+ + +G+ + V GG++S + + ++ AGADLL
Sbjct: 270 --------GLSGAPLLPRALEVVRRLRRGLGQEPTIIGV-GGISSIMDAELMLDAGADLL 320
>gi|319957394|ref|YP_004168657.1| 3-hexulose-6-phosphate synthase [Nitratifractor salsuginis DSM
16511]
gi|319419798|gb|ADV46908.1| 3-hexulose-6-phosphate synthase [Nitratifractor salsuginis DSM
16511]
Length = 210
Score = 38.2 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
+ K L I L V GG+ + ++ +++VVG + K
Sbjct: 147 LADLKKLSKAVDIPLVVAGGINLDTLDEIIACKPEVVVVGGAITGAKNP 195
>gi|307299719|ref|ZP_07579513.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306914646|gb|EFN45038.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 208
Score = 38.2 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSF-----FNQKGEISYAKRLNDLKKSALA 222
GGVT+ N ++AGA L +GS F+++ E +R+ ++++ A
Sbjct: 155 GGVTAENATEYMKAGAVALGIGSYIANRNLFDEEREGEVLERILKIRRAVNA 206
>gi|169349830|ref|ZP_02866768.1| hypothetical protein CLOSPI_00568 [Clostridium spiroforme DSM 1552]
gi|169293398|gb|EDS75531.1| hypothetical protein CLOSPI_00568 [Clostridium spiroforme DSM 1552]
Length = 212
Score = 38.2 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I K + +I + GG+ N K L + G + V S+ + K + A +L +L
Sbjct: 148 INTLKEICNVVNIPVVAIGGIDENNAKQLSKTGISGIAVISAIYANKNIKNAAMKLKEL 206
>gi|139438043|ref|ZP_01771596.1| Hypothetical protein COLAER_00584 [Collinsella aerofaciens ATCC
25986]
gi|133776240|gb|EBA40060.1| Hypothetical protein COLAER_00584 [Collinsella aerofaciens ATCC
25986]
Length = 231
Score = 38.2 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 14/160 (8%)
Query: 66 DCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAI 125
L+I + + G + H S R + G++
Sbjct: 71 QVALLIDDRLDCVLAAREQGIAVDGVHVGQSDIPVEVCRKLLGPDAIVGLSARC----EE 126
Query: 126 LEDVIDEIDMILI--MTVNP--------GFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
+ + + DM L+ + + P G AL + + V
Sbjct: 127 MLEYVKTADMSLVDYLGIGPLHETETKRDCGRAADGSIITKSFEDLAALHAASPVPIVVG 186
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV + ++ L G D V S+ + + AK L D
Sbjct: 187 GGVKTADLPQLKATGVDGFFVVSAVCSADDPYAAAKELVD 226
>gi|167740237|ref|ZP_02413011.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei 14]
gi|167825862|ref|ZP_02457333.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei 9]
gi|167847345|ref|ZP_02472853.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei B7210]
gi|167912578|ref|ZP_02499669.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
pseudomallei 112]
gi|226196876|ref|ZP_03792455.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei Pakistan 9]
gi|254190956|ref|ZP_04897462.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei Pasteur
52237]
gi|254258528|ref|ZP_04949582.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 1710a]
gi|76581084|gb|ABA50559.1| 2-keto-3-deoxy-6-phosphogluconate aldolase [Burkholderia
pseudomallei 1710b]
gi|157938630|gb|EDO94300.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei Pasteur
52237]
gi|225931136|gb|EEH27144.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei Pakistan 9]
gi|254217217|gb|EET06601.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 1710a]
Length = 229
Score = 38.2 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 92 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 144
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 145 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 193
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 194 GLGSALY-APGQTSAVTAVRA 213
>gi|161702969|ref|YP_367946.2| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia sp.
383]
Length = 208
Score = 38.2 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEID 134
+++ + DAG +I I ++ G+A P TP + + D
Sbjct: 72 YVDRVQDAGGALIVM-------PHSDAAVIR-RARERGLASAPGVATPTEAFAALANGAD 123
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+L M + + ++ +A+I + + V GG++ N++ + AGA+
Sbjct: 124 -VLKMF--------PAEQLGVHVVKAWRAVIDRAVPLIPV-GGISPDNMQPFLDAGANGF 173
Query: 195 VVGSSFFN 202
+GS+ +
Sbjct: 174 GLGSALYR 181
>gi|304404854|ref|ZP_07386514.1| thiamine-phosphate pyrophosphorylase [Paenibacillus curdlanolyticus
YK9]
gi|304345733|gb|EFM11567.1| thiamine-phosphate pyrophosphorylase [Paenibacillus curdlanolyticus
YK9]
Length = 298
Score = 38.2 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 21/51 (41%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
I GG+T N+ +++ AGA + S+ + + + +A
Sbjct: 165 IPFVAIGGITLDNVDTVLAAGATRVCAVSAVVGAPDPAAVCRSFKEWIAAA 215
>gi|188584695|ref|YP_001916240.1| Quinolinate phosphoribosyl transferase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349382|gb|ACB83652.1| Quinolinate phosphoribosyl transferase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 346
Score = 38.2 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 158 IRQAKALIGKRSIS---LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+R+ +A + + + GG+ I L+ G D VGS K
Sbjct: 262 VREVRARLNQEGFDHVKILASGGMNPDKISRLIDEGVDAFGVGSYIARSK 311
>gi|308177454|ref|YP_003916860.1| dihydroorotate oxidase [Arthrobacter arilaitensis Re117]
gi|307744917|emb|CBT75889.1| dihydroorotate oxidase [Arthrobacter arilaitensis Re117]
Length = 354
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 80/206 (38%), Gaps = 29/206 (14%)
Query: 23 ISNITKAGAKQI--------HFD-VMDGCFVPNISFGADVIRSLRSYSDSVFDC-HLMIS 72
+ + A A + H D ++ PN + G +++S+ + + + L S
Sbjct: 159 VVELEDAVADYLTSTRHLANHADYLVVNVSSPN-TPGLRLLQSVETLRPLLSEVGQLADS 217
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
HI ++ D+ S + + + +A N L+ +
Sbjct: 218 VAGRHIPLLVKIAPDL------SDEDVADVAQLAIELKLDGIIATNTTIGREGLKTDSSK 271
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ---A 189
++ I G G L + ++ +RQ ++L+ + V GGV N K + + A
Sbjct: 272 VEEI----GAGGLSGAPLKQRSLEVLRQLRSLVPSEMALIAV-GGV--ENAKDVKERLDA 324
Query: 190 GADLLVVGSSFFNQKGEISYAKRLND 215
GAD LV G + F +G +A+ +N
Sbjct: 325 GAD-LVQGYTAFLYEGPF-WARSINK 348
>gi|294794923|ref|ZP_06760058.1| hydroxyethylthiazole kinase [Veillonella sp. 3_1_44]
gi|294454285|gb|EFG22659.1| hydroxyethylthiazole kinase [Veillonella sp. 3_1_44]
Length = 505
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+I + +A ++ GG+T N ++QAGA + V S+ + A+
Sbjct: 438 PCGPDRITELRA--EGLTLPCVGIGGITLDNATPVLQAGASGVAVISAIAHADDPYEAAE 495
Query: 212 RLNDL 216
+L
Sbjct: 496 EFKNL 500
>gi|226324302|ref|ZP_03799820.1| hypothetical protein COPCOM_02083 [Coprococcus comes ATCC 27758]
gi|225206750|gb|EEG89104.1| hypothetical protein COPCOM_02083 [Coprococcus comes ATCC 27758]
Length = 212
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQ---AGADLLVVGSSFFNQKGEISYAKRLND 215
K + K I + GG+T N+ L G ++ S+ F Q K L +
Sbjct: 151 LKEICEKVEIPVVAIGGITEENVTELAGNGICGVAVI---SAVFGQPDIEQATKELKE 205
>gi|94311805|ref|YP_585015.1| nicotinate-nucleotide pyrophosphorylase [Cupriavidus metallidurans
CH34]
gi|93355657|gb|ABF09746.1| Nicotinate-nucleotide pyrophosphorylase [Cupriavidus metallidurans
CH34]
Length = 287
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
++ +R+A A+ +R++ LEV GGV I+ + G D + VG
Sbjct: 227 FSLEMMREAVAINRERAL-LEVSGGVNYETIRRFAETGVDRISVG 270
>gi|300771933|ref|ZP_07081804.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Sphingobacterium spiritivorum ATCC 33861]
gi|300761319|gb|EFK58144.1| nicotinate-nucleotide diphosphorylase (carboxylating)
[Sphingobacterium spiritivorum ATCC 33861]
Length = 285
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+ E+D +L +++A +I R + E GG+T I++ +A
Sbjct: 204 LKELDEVLAFGSVDRVMLDNFTPQQ---VKEAVDIIDGR-LVTEASGGITIDTIRAYAEA 259
Query: 190 GADLLVVG 197
G D + VG
Sbjct: 260 GVDYISVG 267
>gi|162450847|ref|YP_001613214.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Sorangium
cellulosum 'So ce 56']
gi|161161429|emb|CAN92734.1| Nicotinate-nucleotide diphosphorylase (carboxylating) [Sorangium
cellulosum 'So ce 56']
Length = 283
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ ++ R + LEV GG+T I L AG D++ G
Sbjct: 229 ARVRSAQHGRPL-LEVSGGITLERIPELAAAGIDVISAG 266
>gi|82750226|ref|YP_415967.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus RF122]
gi|82655757|emb|CAI80157.1| probable pyridoxine biosynthesis protein [Staphylococcus aureus
RF122]
Length = 291
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 210 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 248
>gi|163845969|ref|YP_001634013.1| thiamine-phosphate pyrophosphorylase [Chloroflexus aurantiacus
J-10-fl]
gi|222523694|ref|YP_002568164.1| thiamine-phosphate pyrophosphorylase [Chloroflexus sp. Y-400-fl]
gi|189030312|sp|A9WDL8|THIE_CHLAA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|163667258|gb|ABY33624.1| thiamine-phosphate pyrophosphorylase [Chloroflexus aurantiacus
J-10-fl]
gi|222447573|gb|ACM51839.1| thiamine-phosphate pyrophosphorylase [Chloroflexus sp. Y-400-fl]
Length = 216
Score = 38.2 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+A+ SI + GG+ N +++AGAD +
Sbjct: 152 LRAIRQHVSIPIVAIGGINQANAADVMRAGADGI 185
>gi|167737513|ref|ZP_02410287.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
14]
gi|167823100|ref|ZP_02454571.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
9]
gi|226194452|ref|ZP_03790050.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei Pakistan 9]
gi|225933537|gb|EEH29526.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei Pakistan 9]
Length = 294
Score = 38.2 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N + PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 198 AAFALNADVPVQIEVETLDQLRTALAH----GAQSVLLDNFTLDMMRDAVRVTEGRAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 253 EVSGGVNFDTVRAIAETGVD 272
>gi|154150250|ref|YP_001403868.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Candidatus Methanoregula boonei 6A8]
gi|153998802|gb|ABS55225.1| Dimethylmenaquinone methyltransferase [Methanoregula boonei 6A8]
Length = 428
Score = 38.2 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ + G Q + + ++ ++ + I I + V GG+ GAD+++
Sbjct: 132 VDIIAAHVGIDQQMIGKDSLDLLQMIRKEI---HIPVAVAGGLDPVTSGEAANIGADIVI 188
Query: 196 VGSSFFNQKGEISYAKRLN 214
VG A+++
Sbjct: 189 VGGWIARSADVEGSARQIR 207
>gi|119719544|ref|YP_920039.1| geranylgeranylglyceryl phosphate synthase-like protein [Thermofilum
pendens Hrk 5]
gi|206558101|sp|A1RXV6|GGGPS_THEPD RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|119524664|gb|ABL78036.1| geranylgeranylglyceryl diphosphate synthase [Thermofilum pendens
Hrk 5]
Length = 255
Score = 38.2 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
E PKI K + G ++ L V GG+ + K L +AGAD++V G+ +
Sbjct: 181 EPVPPKI--VKMVKGVTTLPLIVGGGIRSPEVAKELAKAGADIIVTGTIVEESENIRETI 238
Query: 211 KRL-NDLKKSAL 221
R+ ++ AL
Sbjct: 239 GRIVRATREGAL 250
>gi|20092764|ref|NP_618839.1| geranylgeranylglyceryl phosphate synthase-like protein
[Methanosarcina acetivorans C2A]
gi|31563185|sp|Q8TJ20|GGGPS_METAC RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|19918059|gb|AAM07319.1| PcrB family protein [Methanosarcina acetivorans C2A]
Length = 247
Score = 38.2 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
G G I I K ++G+ L V GGV ++ K AGAD++V G+
Sbjct: 173 EAGSGADAPIPP--EMIGAVKKVLGEN--KLIVGGGVRDAKTAKLCASAGADMIVTGTIV 228
Query: 201 FNQKGEISYAKRL 213
K + +
Sbjct: 229 EEVKDVAAKVAEI 241
>gi|253577549|ref|ZP_04854862.1| thiamine-phosphate pyrophosphorylase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843089|gb|EES71124.1| thiamine-phosphate pyrophosphorylase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 228
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 161 AKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ L + ++ L GG+T+ +++AGAD + V S+ A +L
Sbjct: 164 LRELRDRGITLPLVGIGGITAETAGDVIRAGADGVAVISAITLADDVRQAAAQL 217
>gi|228475242|ref|ZP_04059967.1| pyridoxine biosynthesis protein [Staphylococcus hominis SK119]
gi|314937176|ref|ZP_07844523.1| pyridoxine biosynthesis protein [Staphylococcus hominis subsp.
hominis C80]
gi|228270707|gb|EEK12116.1| pyridoxine biosynthesis protein [Staphylococcus hominis SK119]
gi|313655795|gb|EFS19540.1| pyridoxine biosynthesis protein [Staphylococcus hominis subsp.
hominis C80]
Length = 295
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|262199192|ref|YP_003270401.1| nicotinate-nucleotide pyrophosphorylase [Haliangium ochraceum DSM
14365]
gi|262082539|gb|ACY18508.1| nicotinate-nucleotide pyrophosphorylase [Haliangium ochraceum DSM
14365]
Length = 308
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ +EV GG+ + + +AGAD++ G
Sbjct: 258 GVLVEVSGGIRLDTVAAYAEAGADVISAG 286
>gi|254299305|ref|ZP_04966755.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 406e]
gi|157809021|gb|EDO86191.1| putative KDPG/KHG aldolase [Burkholderia pseudomallei 406e]
Length = 229
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H++ + AG ++I P + + R A G A TP + + D +
Sbjct: 92 HVDEVVRAGGELIVM-PHADGDVVR-----RAKTLGIGCAPGVATPTEAFAALANGAD-V 144
Query: 137 LIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L M + P ++ +A+I R + V GG+T N+ + AGA
Sbjct: 145 LKM----------FPAEQLGTPAVKAWRAVIDARVPLVPV-GGITPENMGPYLAAGASGF 193
Query: 195 VVGSSFFNQKGEISYAKRLND 215
+GS+ + G+ S +
Sbjct: 194 GLGSALY-APGQTSAVTAVRA 213
>gi|73663546|ref|YP_302327.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123641665|sp|Q49V28|PDXS_STAS1 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|72496061|dbj|BAE19382.1| putative pyridoxine biosynthesis protein [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 295
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|329728923|gb|EGG65340.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus epidermidis VCU144]
Length = 295
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|206558232|sp|A0RYM1|GGGPS_CENSY RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
Length = 247
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNI-KSLVQAGADLLVVGS 198
IR + + GG+ + +AGAD +V+G+
Sbjct: 182 PVKPEMIRAVREAFD--GFLIVG-GGIRDEEAARRASEAGADAIVIGT 226
>gi|77965922|gb|ABB07302.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Burkholderia sp. 383]
Length = 225
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEID 134
+++ + DAG +I I ++ G+A P TP + + D
Sbjct: 89 YVDRVQDAGGALIVM-------PHSDAAVIR-RARERGLASAPGVATPTEAFAALANGAD 140
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+L M + + ++ +A+I + + V GG++ N++ + AGA+
Sbjct: 141 -VLKMF--------PAEQLGVHVVKAWRAVIDRAVPLIPV-GGISPDNMQPFLDAGANGF 190
Query: 195 VVGSSFFN 202
+GS+ +
Sbjct: 191 GLGSALYR 198
>gi|114564925|ref|YP_752439.1| patatin [Shewanella frigidimarina NCIMB 400]
gi|114336218|gb|ABI73600.1| Patatin [Shewanella frigidimarina NCIMB 400]
Length = 754
Score = 38.2 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 169 SISLEVDGGVTSRN--IKSLVQAGADLLVV---GSSFFNQKGEISYAKRLNDL 216
+ L VDGG+ + N I + GAD+++ GS+ Q+ S L L
Sbjct: 215 NGRLLVDGGI-ANNMPIDVVKAMGADIIIAVDIGSALTKQENLDSTIAVLEQL 266
>gi|284161330|ref|YP_003399953.1| phosphoribosylanthranilate isomerase [Archaeoglobus profundus DSM
5631]
gi|284011327|gb|ADB57280.1| Phosphoribosylanthranilate isomerase [Archaeoglobus profundus DSM
5631]
Length = 207
Score = 38.2 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 61/147 (41%), Gaps = 16/147 (10%)
Query: 55 RSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
R + ++ ++ +++ + +I + I H E SP + ++ + K
Sbjct: 42 REIIECANIPVFVVSTLTDLNAWMRVIEKTQAEYIQIHAEVSPDLVGKVKELDIKVMKAF 101
Query: 115 ----VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSI 170
++ NPE L + I+ D+ LI+ ++ G G + + + +I +
Sbjct: 102 RVPRLSENPERDAKSLIEKIELYDVDLIL-LDTGKGSGLIHDHRVSRIVA-------KEF 153
Query: 171 SLEVDGGVTSRNIKSLVQ----AGADL 193
+ + GG+ +N+ +V+ G D+
Sbjct: 154 DIILAGGLNPQNVAKIVEFVKPFGVDV 180
>gi|227540211|ref|ZP_03970260.1| nicotinate-nucleotide diphosphorylase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227239935|gb|EEI89950.1| nicotinate-nucleotide diphosphorylase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 285
Score = 38.2 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+ E+D +L +++A +I R + E GG+T I++ +A
Sbjct: 204 LKELDEVLAFGSVDRVMLDNFTPQQ---VKEAVDIIEGR-LVTEASGGITIDTIRAYAEA 259
Query: 190 GADLLVVG 197
G D + VG
Sbjct: 260 GVDYISVG 267
>gi|153810081|ref|ZP_01962749.1| hypothetical protein RUMOBE_00462 [Ruminococcus obeum ATCC 29174]
gi|149834259|gb|EDM89339.1| hypothetical protein RUMOBE_00462 [Ruminococcus obeum ATCC 29174]
Length = 260
Score = 38.2 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
QA + L++ GGV N + ++AGA ++V S F G++S+ + L +++
Sbjct: 73 QALKALAAYPGGLQIGGGVCPDNAEDYLKAGASHVIVTSYVFK-DGQLSW-ENLKKIEEI 130
Query: 220 A 220
A
Sbjct: 131 A 131
>gi|53718554|ref|YP_107540.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
K96243]
gi|126454043|ref|YP_001065260.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
1106a]
gi|167814632|ref|ZP_02446312.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia pseudomallei
91]
gi|242316493|ref|ZP_04815509.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei 1106b]
gi|52208968|emb|CAH34907.1| putative nicotinate-nucleotide pyrophosphorylase [Burkholderia
pseudomallei K96243]
gi|126227685|gb|ABN91225.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei 1106a]
gi|242139732|gb|EES26134.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
pseudomallei 1106b]
Length = 294
Score = 38.2 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N + PV I + +D++ L G L T+ +R A + R++ L
Sbjct: 198 AAFALNADVPVQIEVETLDQLRTALAH----GARSVLLDNFTLDMMRDAVHVTEGRAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV ++++ + G D
Sbjct: 253 EVSGGVNFDTVRAIAETGVD 272
>gi|148656061|ref|YP_001276266.1| thiamine-phosphate pyrophosphorylase [Roseiflexus sp. RS-1]
gi|189030585|sp|A5UUL3|THIE_ROSS1 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|148568171|gb|ABQ90316.1| thiamine-phosphate pyrophosphorylase [Roseiflexus sp. RS-1]
Length = 236
Score = 38.2 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
++ + GG+ N S+++AGA + V+ S+ + + L+ + SAL
Sbjct: 177 NLPVLGIGGINLANAASVIRAGAVGVAVI-SAVIGAPDPEAATRALHAVIASAL 229
>gi|219122347|ref|XP_002181508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406784|gb|EEC46722.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 580
Score = 38.2 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 55/148 (37%), Gaps = 15/148 (10%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRS--LRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+ ++GC + E R+ L+ + G++ + +A V
Sbjct: 437 DYWQEAIESGCFGVHVGQEDLYTCIRAGGLQLLREKRMAFGISTHSYGELATALGVKPSY 496
Query: 134 DMILIMTVNPGFGGQQ----LIESTIPKIRQAKALIGKRSISLEVDGG-VTSRNIKSLVQ 188
+++ P F + +R+ + LI ++ + L V GG + K++
Sbjct: 497 -----ISLGPVFATSSKTVQFDPQGLSLVRKWRELI-QKEVPLVVIGGFSDAERAKAVRG 550
Query: 189 AGAD-LLVVGSSFFNQKGEISYAKRLND 215
GA+ + V+G + + ++N+
Sbjct: 551 LGANCVAVIG-AVTQANDTVEAVSQMNE 577
>gi|42526494|ref|NP_971592.1| dihydroorotate dehydrogenase/oxidoreductase, FAD-binding [Treponema
denticola ATCC 35405]
gi|41816687|gb|AAS11473.1| dihydroorotate dehydrogenase/oxidoreductase, FAD-binding [Treponema
denticola ATCC 35405]
Length = 591
Score = 38.2 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 26/162 (16%)
Query: 43 FVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS 102
F +I + D + I ++
Sbjct: 149 FGASIGCDPAIAAEYVKIIKKAL--------PDCAVPIFVKLTPNV------------ED 188
Query: 103 LRTIHAMGKKTGV----AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKI 158
+ I + + G AIN P +E + + + G G + + I
Sbjct: 189 IGAIASAVIEAGADGITAINTVGPKVYIEPHSGKPILQNKLGGKGGMSGAWVFPRALECI 248
Query: 159 RQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSS 199
Q + +G+ + + GGV T LV+AGAD++ +GS+
Sbjct: 249 GQIRKAVGEEIPIIGM-GGVMTGAQAAELVRAGADIIGIGSA 289
>gi|310942648|pdb|3AJX|A Chain A, Crystal Structure Of 3-Hexulose-6-Phosphate Synthase
gi|310942649|pdb|3AJX|B Chain B, Crystal Structure Of 3-Hexulose-6-Phosphate Synthase
gi|310942650|pdb|3AJX|C Chain C, Crystal Structure Of 3-Hexulose-6-Phosphate Synthase
gi|310942651|pdb|3AJX|D Chain D, Crystal Structure Of 3-Hexulose-6-Phosphate Synthase
Length = 207
Score = 38.2 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
V GGV I ++ +AGA++ V G + +
Sbjct: 163 VAGGVKVATIPAVQKAGAEVAVAGGAIYG 191
>gi|27469180|ref|NP_765817.1| pyridoxine biosynthesis protein [Staphylococcus epidermidis ATCC
12228]
gi|57866089|ref|YP_187754.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus epidermidis
RP62A]
gi|242241850|ref|ZP_04796295.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus
epidermidis W23144]
gi|293367893|ref|ZP_06614532.1| pyridoxine biosynthesis protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|46396421|sp|Q8CQV7|PDXS_STAES RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|68565681|sp|Q5HRN5|PDXS_STAEQ RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|27316729|gb|AAO05904.1|AE016751_199 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57636747|gb|AAW53535.1| pyridoxine biosynthesis protein [Staphylococcus epidermidis RP62A]
gi|242234697|gb|EES37009.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus
epidermidis W23144]
gi|291317982|gb|EFE58389.1| pyridoxine biosynthesis protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329737918|gb|EGG74144.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus epidermidis VCU045]
Length = 295
Score = 38.2 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|89094277|ref|ZP_01167219.1| probable phosphoribosylformimino-5-aminoimidazole
carboxamideribotide isomerase [Oceanospirillum sp.
MED92]
gi|89081532|gb|EAR60762.1| probable phosphoribosylformimino-5-aminoimidazole
carboxamideribotide isomerase [Oceanospirillum sp.
MED92]
Length = 253
Score = 38.2 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
GGV + N S ++AGA ++V S F + + +RL +K A
Sbjct: 81 GGVNADNASSYIEAGASHVIVTSYLF--ENDQFSWQRLEQIKAEVGA 125
>gi|302761068|ref|XP_002963956.1| hypothetical protein SELMODRAFT_80950 [Selaginella moellendorffii]
gi|302769089|ref|XP_002967964.1| hypothetical protein SELMODRAFT_88846 [Selaginella moellendorffii]
gi|300164702|gb|EFJ31311.1| hypothetical protein SELMODRAFT_88846 [Selaginella moellendorffii]
gi|300167685|gb|EFJ34289.1| hypothetical protein SELMODRAFT_80950 [Selaginella moellendorffii]
Length = 411
Score = 38.2 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 21/182 (11%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
E I + G + + +P G ++ D + + S IN
Sbjct: 155 EEIIERVEATGVDALEINFSCPHGMPERKMG----AAVGKDCDLLGEV-------CSWIN 203
Query: 80 IIADAGC-DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL-EDVIDEIDMIL 137
A +T + R+ G + AIN T + + D + +
Sbjct: 204 AKATVPVWAKMTPNVTDITQPARTAI---EAGCEGLSAINTITSIMGINLDTLRPEPCVE 260
Query: 138 IMTVNPGFGGQQLIESTIPKI----RQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ G+ + + + K+ + K+ R+ISL GGV + N + GA+
Sbjct: 261 GYSTPGGYSSRAVRPIALAKVMAIAQMLKSEYPDRNISLSGIGGVESGDNAAEFILLGAN 320
Query: 193 LL 194
+
Sbjct: 321 TV 322
>gi|157273525|gb|ABV27424.1| pyridoxine biosynthesis protein [Candidatus Chloracidobacterium
thermophilum]
Length = 324
Score = 38.2 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 6/144 (4%)
Query: 73 SIDSHINIIADAGCDII--TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
HIN A + T E+ I I + G + G N V L ++
Sbjct: 139 DPYHHINKFAFRVPFVCGATNLGEALRRIGEGAALIRSKG-EAG-TGNIIEAVRHLREIR 196
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQA 189
+I ++ ++ + + +++ +R A GK + L GGV T + +Q
Sbjct: 197 RDIRLLTVLDEDELMAEAKRLQAPYELVRYV-AQHGKLPVPLFAAGGVATPADAALCMQL 255
Query: 190 GADLLVVGSSFFNQKGEISYAKRL 213
GA+ + VGS F + +A+ +
Sbjct: 256 GAETVFVGSGIFKSNDPVRFARAI 279
>gi|75417715|sp|Q9LBW4|HPS_MYCGS RecName: Full=3-hexulose-6-phosphate synthase; Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|6899861|dbj|BAA90546.1| 3-hexulose-6-phosphate synthase [Mycobacterium gastri]
Length = 207
Score = 38.2 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
V GGV I ++ +AGA++ V G + +
Sbjct: 163 VAGGVKVATIPAVQKAGAEVAVAGGAIYG 191
>gi|329925306|ref|ZP_08280248.1| thiamine-phosphate diphosphorylase [Paenibacillus sp. HGF5]
gi|328939950|gb|EGG36284.1| thiamine-phosphate diphosphorylase [Paenibacillus sp. HGF5]
Length = 224
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL-NDL 216
+R+ + + + GG+T ++ ++ AGAD L V S+ + + + + +
Sbjct: 159 LRELREAGI--HLPIVGIGGITVERVEEVIGAGADGLAVISAVTGAESAREVVEAIVDKI 216
Query: 217 KKSALAI 223
+++ I
Sbjct: 217 RRATEEI 223
>gi|319399732|gb|EFV87981.1| pyridoxine biosynthesis protein [Staphylococcus epidermidis FRI909]
Length = 286
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 205 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 243
>gi|298292575|ref|YP_003694514.1| thiamine-phosphate pyrophosphorylase [Starkeya novella DSM 506]
gi|296929086|gb|ADH89895.1| thiamine-phosphate pyrophosphorylase [Starkeya novella DSM 506]
Length = 201
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 7/139 (5%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
H + + GCD H L I + G K G++ + E + + ++ D
Sbjct: 61 DHWRLAIEEGCDF--VHLGQEDLAAADLTAIRSAGLKLGISTHDEAELEV--ALLARPDY 116
Query: 136 ILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + V P + + + ++ + K +G + L GG+T + +++AGAD L
Sbjct: 117 VALGPVYPTILKKMRWAPQGLERVAKWKKRVG--DLPLVGIGGLTIDRAQGVLEAGADSL 174
Query: 195 VVGSSFFNQKGEISYAKRL 213
V + A+
Sbjct: 175 AVVTDVLLNDNPERRAREW 193
>gi|268680383|ref|YP_003304814.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Sulfurospirillum deleyianum DSM 6946]
gi|268618414|gb|ACZ12779.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Sulfurospirillum deleyianum DSM 6946]
Length = 240
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ ++ +N F G+ I KIRQ K + LE+ GG+ I+ V G D
Sbjct: 45 HWVHLVDLNGAFAGEPKNLEQIEKIRQ------KCHLKLELGGGIRDEETIRRYVDLGID 98
Query: 193 LLVVGS 198
+++GS
Sbjct: 99 RIILGS 104
>gi|225850944|ref|YP_002731178.1| thiamine-phosphate pyrophosphorylase [Persephonella marina EX-H1]
gi|259518428|sp|C0QR82|THIE_PERMH RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|225646322|gb|ACO04508.1| thiamine-phosphate pyrophosphorylase [Persephonella marina EX-H1]
Length = 209
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRL 213
+ K+++ + + +++ GG+ +N+ L++ G ++ VV S+ F +RL
Sbjct: 146 LEKLKEVMKISVQPVVAI---GGINEKNLTDLLKTGCRNVAVV-SAVFKDDNIKENTERL 201
Query: 214 NDLKKS 219
++ ++
Sbjct: 202 KNIMEN 207
>gi|217977597|ref|YP_002361744.1| thiamine-phosphate pyrophosphorylase [Methylocella silvestris BL2]
gi|217502973|gb|ACK50382.1| thiamine-phosphate pyrophosphorylase [Methylocella silvestris BL2]
Length = 208
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ D GCD I E L+ I G K GV+ + E +A + D
Sbjct: 54 DYWRHAIDLGCDFIHLGQEDLETAD--LKAIRQAGLKLGVSTHDEAELARALETGP--DY 109
Query: 136 ILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I + + P + + +I + K IG +I L GG+T +++AGAD
Sbjct: 110 IALGPIYPTILKKMPFAPQGLARIGEWKKRIG--TIPLVAIGGITLERAPGVLEAGAD 165
>gi|197302436|ref|ZP_03167491.1| hypothetical protein RUMLAC_01164 [Ruminococcus lactaris ATCC
29176]
gi|197298334|gb|EDY32879.1| hypothetical protein RUMLAC_01164 [Ruminococcus lactaris ATCC
29176]
Length = 261
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
RQA + +++ GG+T+ N ++AGA ++V S F + L L
Sbjct: 72 RQALEALRAYPQGMQIGGGITADNAAGYLEAGASHVIVTSYVFR--DGRFQKENLEKLVA 129
Query: 219 S 219
+
Sbjct: 130 A 130
>gi|190894586|ref|YP_001984879.1| thiamine-phosphate pyrophosphorylase [Rhizobium etli CIAT 652]
gi|190700247|gb|ACE94329.1| thiamine-phosphate pyrophosphorylase protein [Rhizobium etli CIAT
652]
Length = 204
Score = 38.2 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 7/118 (5%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ + D GCD I H L I G K G++ + + + D
Sbjct: 61 DYWKLAIDEGCDFI--HLGQEDLAAADLNAIRRAGLKLGLSTHDPSELETALAAAP--DY 116
Query: 136 ILIMTVNPGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ + V P + + ++ + +G + L GG+++ +++ GAD
Sbjct: 117 VALGPVWPTILKEMKWAPQGVERLADWRRRVG--PMPLVAIGGISAERAPLVLENGAD 172
>gi|300712220|ref|YP_003738034.1| tryptophan synthase subunit alpha [Halalkalicoccus jeotgali B3]
gi|299125903|gb|ADJ16242.1| tryptophan synthase subunit alpha [Halalkalicoccus jeotgali B3]
Length = 276
Score = 38.2 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 20/163 (12%)
Query: 74 IDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+S + A+AG D P R + G + P T L+ ++D
Sbjct: 109 PESFVRRAAEAGIDGFVVPDLPAEESDPLR--EACDSYGLDLVFIVAPTTRGDRLKRIMD 166
Query: 132 EIDMILIMTVNPGFGGQQ--LIESTIPKIRQAKALIGKRSISLEVDGGVTS-RNIKSLVQ 188
++ + + G G + + E T + + + +++ G++ + + +V
Sbjct: 167 QVSGYVYVQARLGTTGARTDVSEQTDMSLGRLEEWDVPKAVGF----GISEREHAERIVA 222
Query: 189 AGADLLVVGSSFF-----NQKGEISYAKRL----NDLKKSALA 222
GAD ++VGS+ + + A+RL +LK+ ALA
Sbjct: 223 GGADGIIVGSALVDIVAEGDTDDGTVAERLERKARELKEGALA 265
>gi|148240052|ref|YP_001225439.1| thiamine-phosphate pyrophosphorylase [Synechococcus sp. WH 7803]
gi|166228942|sp|A5GMH7|THIE_SYNPW RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|147848591|emb|CAK24142.1| Thiamine-phosphate pyrophosphorylase [Synechococcus sp. WH 7803]
Length = 353
Score = 38.2 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 175 DGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRLNDL 216
GG+T+ + + +AGA + VV S+ + S +++L DL
Sbjct: 310 IGGITATTLPRVREAGAQRVAVV-SAIMASEDPASASRQLLDL 351
>gi|295090386|emb|CBK76493.1| thiamine-phosphate diphosphorylase [Clostridium cf. saccharolyticum
K10]
Length = 211
Score = 38.2 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 21/56 (37%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + S+ + V GG+ N G D L V S+ Q A+ L +
Sbjct: 146 LKEIRTAVSLPIVVIGGINKDNAHCFKTIGIDGLAVVSAILAQPNIKVAAEELKAI 201
>gi|229550784|ref|ZP_04439509.1| possible 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
[Lactobacillus rhamnosus LMS2-1]
gi|229315849|gb|EEN81822.1| possible 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
[Lactobacillus rhamnosus LMS2-1]
Length = 195
Score = 38.2 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 93 PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE 152
E +P I + R + A++P V +L+ D + + T+ P F
Sbjct: 77 AEFTPDIFKIAREAKVITVPA--AMSPSEVVEMLDLGADIVKLFPASTLGPSFFKAIQGP 134
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
K+ GGV +N + ++GA L VGSS FNQ + K
Sbjct: 135 LGKQKLMAV--------------GGVNVKNARQFFESGASYLGVGSSMFNQSDVKT--KN 178
Query: 213 LNDLKKS 219
L+KS
Sbjct: 179 ALGLRKS 185
>gi|154151595|ref|YP_001405213.1| thiamine-phosphate pyrophosphorylase [Candidatus Methanoregula
boonei 6A8]
gi|189030570|sp|A7IA09|THIE_METB6 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|154000147|gb|ABS56570.1| thiamine-phosphate pyrophosphorylase [Methanoregula boonei 6A8]
Length = 216
Score = 38.2 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + + ++ + GG+T N+ ++ GAD + V S+ Q ++ A+ L +
Sbjct: 144 ISGLREIRAAVAVPVVAIGGITRDNVAEVIAGGADSIAVISAVVGQPDIVAAARDLRE 201
>gi|158428200|pdb|2DZW|A Chain A, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(E244a) From A Hyperthermophile, Pyrococcus Furiosus
gi|158428201|pdb|2DZW|B Chain B, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(E244a) From A Hyperthermophile, Pyrococcus Furiosus
Length = 248
Score = 38.2 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
+++ R +S + + + + + +G D I H +
Sbjct: 69 FWIVKEFRRHSSTPI-VLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IAREEGIKTVFLAAPNTPDERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
L
Sbjct: 243 EAL 245
>gi|328765901|gb|EGF75996.1| hypothetical protein BATDEDRAFT_93141 [Batrachochytrium
dendrobatidis JAM81]
Length = 193
Score = 38.2 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ I + + + GG+T N S+++AGAD + V S+ K L
Sbjct: 137 LEWITTLRREF--PDLPIVGIGGITIENAASVIEAGADGVSVISAITAAPDIKRAVKLL 193
>gi|110597879|ref|ZP_01386161.1| inosine-5'-monophosphate dehydrogenase [Chlorobium ferrooxidans DSM
13031]
gi|110340456|gb|EAT58942.1| inosine-5'-monophosphate dehydrogenase [Chlorobium ferrooxidans DSM
13031]
Length = 497
Score = 38.2 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 62/160 (38%), Gaps = 19/160 (11%)
Query: 72 SSIDSHINIIADAGCDIITF-----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
+ + + +AG D++ H ++ R ++ +A + +A N TP +
Sbjct: 234 ENTLDRVKALVNAGVDVVAVDTAHGHSKAVLDTVRLIKNAYADLQV--IAGNVATP-EAV 290
Query: 127 EDVIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
D+I+ + + + PG G + + I K + + DGGV
Sbjct: 291 RDLIEAGADCVKVGIGPGSICTTRIVAGVGM--PQLTAIINCAEEAAKTNTPIIADGGVK 348
Query: 180 SR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+I + AGAD +++GS F E L + +K
Sbjct: 349 YSGDIAKALAAGADSVMIGS-IFAGTDESPGETILYEGRK 387
>gi|223982644|ref|ZP_03632877.1| hypothetical protein HOLDEFILI_00151 [Holdemania filiformis DSM
12042]
gi|223965394|gb|EEF69673.1| hypothetical protein HOLDEFILI_00151 [Holdemania filiformis DSM
12042]
Length = 234
Score = 38.2 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 26/150 (17%)
Query: 67 CHLMISSIDSHINIIADAGCDIITFHPESSPHIR-----RSLRTIHAMGKKTGVAINPET 121
C + I+ + ++ + G DII + +R I V + T
Sbjct: 79 CDVYITPTMKEVEVLREIGSDIIAVDGTDRNNCNGRKAYELIREIKETYPDQVVMADIAT 138
Query: 122 ------PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI----PKIRQAKALIGKRSIS 171
V D+I T G+ L + I Q + + I+
Sbjct: 139 INDARHSVEAGADIIS--------TTLSGYTEDSLDRYALGTDFDLIEQIRKEFPEVFIN 190
Query: 172 LEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
E G + T K + GAD++VVG++
Sbjct: 191 AE--GRIWTREEAKKAFECGADVIVVGTAI 218
>gi|269215865|ref|ZP_06159719.1| thiamine-phosphate diphosphorylase [Slackia exigua ATCC 700122]
gi|269130815|gb|EEZ61891.1| thiamine-phosphate diphosphorylase [Slackia exigua ATCC 700122]
Length = 216
Score = 38.2 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +A+ I + GG+ R + L + G V S+ F+ A+RL++
Sbjct: 153 LETLRAICDAVDIPVVAIGGLNERTVDVLAETGVQGAAVVSALFSADDVRGAAQRLSE 210
>gi|254500597|ref|ZP_05112748.1| Thiamine monophosphate synthase/TENI subfamily [Labrenzia
alexandrii DFL-11]
gi|222436668|gb|EEE43347.1| Thiamine monophosphate synthase/TENI subfamily [Labrenzia
alexandrii DFL-11]
Length = 201
Score = 38.2 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 63/171 (36%), Gaps = 15/171 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
I+ + G K + + D + I + S+ H ++ + +
Sbjct: 16 IARLVPIGVKLVQLRIKDQ--------PEEEIARQIRNAKSICADHGCQLVVNDYWRLAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
GCD I E + TI G K GV+ + ++ V + + + + V
Sbjct: 68 SEGCDFIHLGQEDLADAD--VDTIRNAGLKLGVSTHDGAELSTALAV--QPEYVALGPVY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
P + + + KI + KA IG + L GG+T + + + GAD
Sbjct: 124 PTVTKKLKWAPQGLEKITRWKADIG--DLPLVTIGGLTVERLSGVFEHGAD 172
>gi|116871709|ref|YP_848490.1| thiamine-phosphate pyrophosphorylase [Listeria welshimeri serovar
6b str. SLCC5334]
gi|123465975|sp|A0AFC5|THIE_LISW6 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|116740587|emb|CAK19707.1| thiamine-phosphate pyrophosphorylase [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 208
Score = 38.2 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 160 QAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ I + I + GG+ NI ++ AGAD + V S+ L
Sbjct: 152 EILKEIRRAGIKLPIVGIGGINEANIAEVLAAGADGVSVISAITRADDYQLVIANL 207
>gi|54027314|ref|YP_121556.1| thiamine-phosphate pyrophosphorylase [Nocardia farcinica IFM 10152]
gi|81822823|sp|Q5YNP9|THIE_NOCFA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|54018822|dbj|BAD60192.1| putative thiamine monophosphate synthase [Nocardia farcinica IFM
10152]
Length = 232
Score = 38.2 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG+ + L+ AGAD +VV + + + A+ L +A
Sbjct: 186 IGGIDLERLPELLAAGADRIVVVRAITEARDPEAAARALKSALLAA 231
>gi|223043068|ref|ZP_03613116.1| pyridoxine biosynthesis protein [Staphylococcus capitis SK14]
gi|314932742|ref|ZP_07840111.1| pyridoxine biosynthesis protein [Staphylococcus caprae C87]
gi|222443922|gb|EEE50019.1| pyridoxine biosynthesis protein [Staphylococcus capitis SK14]
gi|313654423|gb|EFS18176.1| pyridoxine biosynthesis protein [Staphylococcus caprae C87]
Length = 295
Score = 38.2 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|171185174|ref|YP_001794093.1| orotidine 5'-phosphate decarboxylase [Thermoproteus neutrophilus
V24Sta]
gi|170934386|gb|ACB39647.1| Orotidine 5'-phosphate decarboxylase [Thermoproteus neutrophilus
V24Sta]
Length = 222
Score = 38.2 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG--ADLLVVGSSFFNQKGEISYAKRLND 215
+ A L + IS+ V GG+T R I+ + ++G D+++VG + S +N+
Sbjct: 153 LAAASRLREETGISVGVAGGITEREIEIVTRSGKRVDVIIVGRAITGDASPASRFIIMNN 212
Query: 216 LKKS 219
+ K
Sbjct: 213 ILKQ 216
>gi|167770339|ref|ZP_02442392.1| hypothetical protein ANACOL_01682 [Anaerotruncus colihominis DSM
17241]
gi|167667661|gb|EDS11791.1| hypothetical protein ANACOL_01682 [Anaerotruncus colihominis DSM
17241]
Length = 206
Score = 38.2 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + SI + GG+ N+ L +G D V S+ F Q+ + AKRL
Sbjct: 144 LRGIRAAVSIPIVAIGGINVENMLQLKGSGIDGAAVVSALFAQQDVYAAAKRL 196
>gi|254246371|ref|ZP_04939692.1| KDPG and KHG aldolase [Burkholderia cenocepacia PC184]
gi|124871147|gb|EAY62863.1| KDPG and KHG aldolase [Burkholderia cenocepacia PC184]
Length = 276
Score = 38.2 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 20/138 (14%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEID 134
+++ + DAG +I I ++ G+A P TP + + D
Sbjct: 140 YVDRVQDAGGALIVM-------PHSDAAVIR-RARERGLASAPGVATPTEAFAALTNGAD 191
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+L M + + ++ +A+I + + V GG++ N++ + AGA+
Sbjct: 192 -VLKMF--------PAEQLGVTVVKAWRAVIDRAVPLIPV-GGISPDNMQPFLDAGANGF 241
Query: 195 VVGSSFFNQKGEISYAKR 212
+GS+ +
Sbjct: 242 GLGSALYRPGQSADTTAA 259
>gi|37525513|ref|NP_928857.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|39931336|sp|Q7N6I4|HIS41_PHOLL RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase 1; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase 1
gi|36784941|emb|CAE13859.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 245
Score = 38.2 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 161 AKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGS 198
+ L+ SI ++V GG+ T ++K+L+ AGA+ +V+GS
Sbjct: 65 LRKLLAAVSIPVQVGGGIRTEEDVKTLLDAGANRIVIGS 103
>gi|242372735|ref|ZP_04818309.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus
epidermidis M23864:W1]
gi|242349508|gb|EES41109.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus
epidermidis M23864:W1]
Length = 295
Score = 38.2 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|70727489|ref|YP_254405.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus haemolyticus
JCSC1435]
gi|123659206|sp|Q4L3H8|PDXS_STAHJ RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|68448215|dbj|BAE05799.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 295
Score = 38.2 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|88807586|ref|ZP_01123098.1| N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus sp. WH
7805]
gi|88788800|gb|EAR19955.1| N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus sp. WH
7805]
Length = 238
Score = 38.2 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 140 TVNPGFGGQQ--LIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVV 196
T G+ Q + ++ +A + ++ + +GG+ + + + GAD +VV
Sbjct: 157 TTLFGYTEQTKESRPPGLHLLKPLRAQLSAETMLIC-EGGIASPQTASEAIAEGADAVVV 215
Query: 197 GSSF 200
G++
Sbjct: 216 GTAI 219
>gi|329765237|ref|ZP_08256817.1| tryptophan synthase, alpha subunit [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329138143|gb|EGG42399.1| tryptophan synthase, alpha subunit [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 266
Score = 38.2 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 20/169 (11%)
Query: 47 ISFGADVIRSLRSYSDSVFDCH-----LMISSIDSHINIIADAGCDIITFH----PESSP 97
IS ++++ +R +D L I +AG D + ES
Sbjct: 78 ISKFFEIVKKIRKETDIPLILMTYTNILYHKGYQKFIIEAKNAGIDGLILPDMSIEESKE 137
Query: 98 HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ--LIESTI 155
++ + I T I+P T +E + L + G G + + T+
Sbjct: 138 YLAATKNKI-----DTIFLISPNTTKTRIEKIAKLSSGFLYLVAVYGTTGVKTGIKNYTL 192
Query: 156 PKIRQAKALIGKRSISLEVDG-GV-TSRNIKSLVQAGADLLVVGSSFFN 202
I++ K + ++ I + V G GV T ++K ++ GAD ++VGS+F
Sbjct: 193 KAIKEVKKITKEK-IPVGV-GFGVSTPEDVKKYIRTGADAVIVGSAFLK 239
>gi|323439788|gb|EGA97505.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus O11]
gi|323443110|gb|EGB00730.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus O46]
Length = 282
Score = 38.2 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 201 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 239
>gi|302332232|gb|ADL22425.1| pyridoxal biosynthesis lyase [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 295
Score = 38.2 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|282928854|ref|ZP_06336445.1| pyridoxine biosynthesis protein [Staphylococcus aureus A10102]
gi|282589462|gb|EFB94551.1| pyridoxine biosynthesis protein [Staphylococcus aureus A10102]
Length = 297
Score = 38.2 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 216 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 254
>gi|58616930|ref|YP_196129.1| thiamine-phosphate pyrophosphorylase [Ehrlichia ruminantium str.
Gardel]
gi|58416542|emb|CAI27655.1| Thiamine-phosphate pyrophosphorylase [Ehrlichia ruminantium str.
Gardel]
Length = 350
Score = 38.2 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 14/145 (9%)
Query: 77 HINIIADAGCDI--ITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED----VI 130
IN + H + + I G + G++ + +AI I
Sbjct: 211 FINDYWELAIKYKAYGVHLGQEDLQNANFQEIFNAGLRLGISTHCYYELAIARYLSPSYI 270
Query: 131 DEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+ M N F Q + + + + GG+ N+ S+++ G
Sbjct: 271 AFGPIFPTMLKNMNFMSQG--------VSLLASWVKHLHYRIVAIGGINLSNLDSIIKTG 322
Query: 191 ADLLVVGSSFFNQKGEISYAKRLND 215
D + V S+ N K + D
Sbjct: 323 VDGIAVISAVINSKYPDKDIREFLD 347
>gi|11182415|sp|O74110|PYRF_THEAC RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
Length = 214
Score = 38.2 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
++AGADL++VG S + ++ A+ +N+ + A A++
Sbjct: 173 ASDAIKAGADLVIVGRSIYESADPVTAAEAINE--EIAKAVE 212
>gi|15923509|ref|NP_371043.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus Mu50]
gi|15926196|ref|NP_373729.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus N315]
gi|21282203|ref|NP_645291.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus MW2]
gi|49482748|ref|YP_039972.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49485383|ref|YP_042604.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57651396|ref|YP_185452.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus COL]
gi|87160909|ref|YP_493207.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194280|ref|YP_499072.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148266978|ref|YP_001245921.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus JH9]
gi|150393025|ref|YP_001315700.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus JH1]
gi|151220693|ref|YP_001331515.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156978847|ref|YP_001441106.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus Mu3]
gi|161508757|ref|YP_001574416.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141045|ref|ZP_03565538.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253315628|ref|ZP_04838841.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731121|ref|ZP_04865286.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253732526|ref|ZP_04866691.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|255005312|ref|ZP_05143913.2| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257424632|ref|ZP_05601059.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427300|ref|ZP_05603699.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257429936|ref|ZP_05606320.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257432638|ref|ZP_05608998.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257435542|ref|ZP_05611590.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus M876]
gi|257795383|ref|ZP_05644362.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9781]
gi|258408930|ref|ZP_05681211.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9763]
gi|258420433|ref|ZP_05683376.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9719]
gi|258422635|ref|ZP_05685541.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9635]
gi|258439353|ref|ZP_05690285.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9299]
gi|258444093|ref|ZP_05692430.1| pyridoxine biosynthesis protein [Staphylococcus aureus A8115]
gi|258446361|ref|ZP_05694519.1| pyridoxine biosynthesis protein [Staphylococcus aureus A6300]
gi|258448454|ref|ZP_05696569.1| pyridoxine biosynthesis protein [Staphylococcus aureus A6224]
gi|258452749|ref|ZP_05700747.1| pyridoxine biosynthesis protein [Staphylococcus aureus A5948]
gi|258453810|ref|ZP_05701784.1| pyridoxine biosynthesis protein [Staphylococcus aureus A5937]
gi|262049561|ref|ZP_06022430.1| pyridoxine biosynthesis protein [Staphylococcus aureus D30]
gi|262053153|ref|ZP_06025316.1| pyridoxine biosynthesis protein [Staphylococcus aureus 930918-3]
gi|269202141|ref|YP_003281410.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus ED98]
gi|282894951|ref|ZP_06303174.1| pyridoxine biosynthesis protein [Staphylococcus aureus A8117]
gi|282903106|ref|ZP_06310997.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus C160]
gi|282904896|ref|ZP_06312754.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282907846|ref|ZP_06315681.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282910159|ref|ZP_06317963.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282913351|ref|ZP_06321140.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus M899]
gi|282915840|ref|ZP_06323605.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus D139]
gi|282918305|ref|ZP_06326042.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus C427]
gi|282923267|ref|ZP_06330947.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus C101]
gi|282924431|ref|ZP_06332103.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9765]
gi|283769674|ref|ZP_06342566.1| pyridoxal biosynthesis lyase pdxS [Staphylococcus aureus subsp.
aureus H19]
gi|283957316|ref|ZP_06374769.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284023528|ref|ZP_06377926.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus 132]
gi|293500397|ref|ZP_06666248.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|293509342|ref|ZP_06668053.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus M809]
gi|293523929|ref|ZP_06670616.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus M1015]
gi|295406894|ref|ZP_06816697.1| pyridoxine biosynthesis protein [Staphylococcus aureus A8819]
gi|295427055|ref|ZP_06819691.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296276950|ref|ZP_06859457.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus MR1]
gi|297208768|ref|ZP_06925196.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297246282|ref|ZP_06930131.1| pyridoxine biosynthesis protein [Staphylococcus aureus A8796]
gi|297590592|ref|ZP_06949231.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus MN8]
gi|300912858|ref|ZP_07130300.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381884|ref|ZP_07364531.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|46396184|sp|P60797|PDXS_STAAM RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|46396185|sp|P60798|PDXS_STAAN RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|46396186|sp|P60799|PDXS_STAAW RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|68565677|sp|Q5HIF5|PDXS_STAAC RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|68565744|sp|Q6GBW9|PDXS_STAAS RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|68565746|sp|Q6GJF0|PDXS_STAAR RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|122540138|sp|Q2G0Q1|PDXS_STAA8 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|123487107|sp|Q2FJC1|PDXS_STAA3 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|166980433|sp|A7WYT1|PDXS_STAA1 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|172048771|sp|A6QEH1|PDXS_STAAE RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|189036888|sp|A6TYZ5|PDXS_STAA2 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|189036889|sp|A5IQ72|PDXS_STAA9 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|189036890|sp|A8YZL5|PDXS_STAAT RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|13700409|dbj|BAB41707.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246287|dbj|BAB56681.1| putative pyridoxine biosynthesis protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|21203639|dbj|BAB94339.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49240877|emb|CAG39544.1| putative pyridoxine biosynthesis protein [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49243826|emb|CAG42251.1| putative pyridoxine biosynthesis protein [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57285582|gb|AAW37676.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus COL]
gi|87126883|gb|ABD21397.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87201838|gb|ABD29648.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147740047|gb|ABQ48345.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus JH9]
gi|149945477|gb|ABR51413.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150373493|dbj|BAF66753.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156720982|dbj|BAF77399.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367566|gb|ABX28537.1| possible pyridoxine (vitamin B6) biosynthesis protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253725135|gb|EES93864.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253729455|gb|EES98184.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|257272202|gb|EEV04325.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275493|gb|EEV06966.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257279133|gb|EEV09734.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257282053|gb|EEV12188.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257284733|gb|EEV14852.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus M876]
gi|257789355|gb|EEV27695.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9781]
gi|257840281|gb|EEV64744.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9763]
gi|257843623|gb|EEV68029.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9719]
gi|257847207|gb|EEV71215.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9635]
gi|257847690|gb|EEV71689.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9299]
gi|257850763|gb|EEV74708.1| pyridoxine biosynthesis protein [Staphylococcus aureus A8115]
gi|257854955|gb|EEV77900.1| pyridoxine biosynthesis protein [Staphylococcus aureus A6300]
gi|257858323|gb|EEV81210.1| pyridoxine biosynthesis protein [Staphylococcus aureus A6224]
gi|257859622|gb|EEV82472.1| pyridoxine biosynthesis protein [Staphylococcus aureus A5948]
gi|257864066|gb|EEV86820.1| pyridoxine biosynthesis protein [Staphylococcus aureus A5937]
gi|259158948|gb|EEW44029.1| pyridoxine biosynthesis protein [Staphylococcus aureus 930918-3]
gi|259162301|gb|EEW46874.1| pyridoxine biosynthesis protein [Staphylococcus aureus D30]
gi|262074431|gb|ACY10404.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus ED98]
gi|269940090|emb|CBI48466.1| putative pyridoxine biosynthesis protein [Staphylococcus aureus
subsp. aureus TW20]
gi|282314135|gb|EFB44525.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus C101]
gi|282317439|gb|EFB47811.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus C427]
gi|282320136|gb|EFB50481.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus D139]
gi|282322383|gb|EFB52705.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus M899]
gi|282325551|gb|EFB55859.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282328230|gb|EFB58508.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331721|gb|EFB61232.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282592842|gb|EFB97846.1| pyridoxine biosynthesis protein [Staphylococcus aureus A9765]
gi|282596061|gb|EFC01022.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus C160]
gi|282762633|gb|EFC02770.1| pyridoxine biosynthesis protein [Staphylococcus aureus A8117]
gi|283459821|gb|EFC06911.1| pyridoxal biosynthesis lyase pdxS [Staphylococcus aureus subsp.
aureus H19]
gi|283469811|emb|CAQ49022.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus ST398]
gi|283790767|gb|EFC29582.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285816218|gb|ADC36705.1| Pyridoxine biosynthesis glutamine amidotransferase, synthase
subunit [Staphylococcus aureus 04-02981]
gi|290920892|gb|EFD97953.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus aureus subsp.
aureus M1015]
gi|291095402|gb|EFE25663.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467439|gb|EFF09954.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus M809]
gi|294968125|gb|EFG44151.1| pyridoxine biosynthesis protein [Staphylococcus aureus A8819]
gi|295128843|gb|EFG58473.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296886713|gb|EFH25618.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297176880|gb|EFH36138.1| pyridoxine biosynthesis protein [Staphylococcus aureus A8796]
gi|297576891|gb|EFH95606.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus MN8]
gi|298693850|gb|ADI97072.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus ED133]
gi|300885962|gb|EFK81165.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|302750410|gb|ADL64587.1| pyridoxal biosynthesis lyase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304339670|gb|EFM05617.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312439063|gb|ADQ78134.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|312829014|emb|CBX33856.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315128810|gb|EFT84809.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus CGS03]
gi|315193882|gb|EFU24276.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus CGS00]
gi|315196671|gb|EFU27018.1| pyridoxine biosynthesis protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|320141618|gb|EFW33457.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320141754|gb|EFW33582.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus aureus subsp. aureus MRSA177]
gi|329313238|gb|AEB87651.1| Pyridoxal biosynthesis lyase pdxS [Staphylococcus aureus subsp.
aureus T0131]
gi|329727904|gb|EGG64353.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus aureus subsp. aureus 21172]
gi|329731049|gb|EGG67422.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus aureus subsp. aureus 21189]
gi|329731975|gb|EGG68331.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus aureus subsp. aureus 21193]
Length = 295
Score = 38.2 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|253702118|ref|YP_003023307.1| phosphomethylpyrimidine kinase [Geobacter sp. M21]
gi|251776968|gb|ACT19549.1| phosphomethylpyrimidine kinase [Geobacter sp. M21]
Length = 484
Score = 37.8 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K+ K GK I + GG+ N +++ AGAD + V S+ + + A L
Sbjct: 154 EKLALLK---GKLRIPVVAIGGIARDNACAVIDAGADAIAVISAVLSARSPGLAATELAL 210
Query: 216 L 216
L
Sbjct: 211 L 211
>gi|153956404|ref|YP_001397169.1| hypothetical protein CKL_3820 [Clostridium kluyveri DSM 555]
gi|219856716|ref|YP_002473838.1| hypothetical protein CKR_3373 [Clostridium kluyveri NBRC 12016]
gi|146349262|gb|EDK35798.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219570440|dbj|BAH08424.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 227
Score = 37.8 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 21/98 (21%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVN----------------PGFGGQQLIESTIP 156
GV +N TP ++ V D ID+ +I+T+ G + +
Sbjct: 107 MGVVLNSPTPNEVIRQVRDTIDIPIIVTIVSEYENVKERVEAGVTIINVSGAKETPKIVK 166
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
KIR S + GG T IK + AGA+ +
Sbjct: 167 KIRD-----EYPSFPIIATGGPTEETIKETILAGANAI 199
>gi|124007429|ref|ZP_01692135.1| geranylgeranylglyceryl phosphate synthase [Microscilla marina ATCC
23134]
gi|123987085|gb|EAY26834.1| geranylgeranylglyceryl phosphate synthase [Microscilla marina ATCC
23134]
Length = 230
Score = 37.8 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSF 200
+ I + + + + GG+ + +QAGAD++VVG++
Sbjct: 162 PISAKMISMIRKSVDAP---IIIGGGINTPERAQKALQAGADVIVVGNAI 208
>gi|299472726|emb|CBN80294.1| Thiamine monophosphate synthase [Ectocarpus siliculosus]
Length = 575
Score = 37.8 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ +AL+ I++ GG++ +++AGAD + V S+
Sbjct: 497 AFSPRGAVLVGAWRALVDVPLIAI---GGISLERAPEVLEAGADSIAVISAITKADDVEE 553
Query: 209 YAKRLN 214
++ +
Sbjct: 554 AVRQWD 559
>gi|104780147|ref|YP_606645.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas entomophila
L48]
gi|95109134|emb|CAK13831.1| nicotinate-nucleotide pyrophosphorylase (quinolinate
phosphoribosyltransferase) [Pseudomonas entomophila L48]
Length = 282
Score = 37.8 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P PV I + +DE+ L G L E T+ ++R+A + ++ LE GGV
Sbjct: 192 PGKPVEIEVESLDELRQAL----AAGADIVMLDELTLDEMREAVRINDGKA-KLEASGGV 246
Query: 179 TSRNIKSLVQAGADLLVVGS 198
++ + + G D + +GS
Sbjct: 247 NETTLRVIAETGVDYISIGS 266
>gi|120553621|ref|YP_957972.1| thiamine-phosphate pyrophosphorylase [Marinobacter aquaeolei VT8]
gi|189030569|sp|A1TYG6|THIE_MARAV RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|120323470|gb|ABM17785.1| thiamine-phosphate diphosphorylase [Marinobacter aquaeolei VT8]
Length = 222
Score = 37.8 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQK 204
++ + +AKAL + + GG+T N + L++AGAD + VVG F +
Sbjct: 148 PASPDVLTEAKAL----GLPITAIGGITGNNAEPLIRAGADLVAVVG-GLFGGQ 196
>gi|115350574|ref|YP_772413.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
ambifaria AMMD]
gi|115280562|gb|ABI86079.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Burkholderia ambifaria
AMMD]
Length = 225
Score = 37.8 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 20/158 (12%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR ++ + DAG +I I ++
Sbjct: 66 IAALRRALPDDMIVGAGTVLRAEFVDRVQDAGGTLIVM-------PHSDAAVIR-RARER 117
Query: 114 GVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+A P TP + + D +L M + +P ++ +A+I +
Sbjct: 118 GLASAPGVATPTEAFAALANGAD-VLKMF--------PAEQLGVPVVKAWRAVIDRAVPL 168
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
L V GG+T N++ + AGA+ +GS+ +
Sbjct: 169 LPV-GGITPDNMQPFLAAGANGFGLGSALYRPGQSADA 205
>gi|239636916|ref|ZP_04677914.1| pyridoxine biosynthesis protein [Staphylococcus warneri L37603]
gi|239597464|gb|EEQ79963.1| pyridoxine biosynthesis protein [Staphylococcus warneri L37603]
gi|330686230|gb|EGG97842.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus epidermidis VCU121]
Length = 295
Score = 37.8 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|294851611|ref|ZP_06792284.1| thiamine-phosphate pyrophosphorylase [Brucella sp. NVSL 07-0026]
gi|294820200|gb|EFG37199.1| thiamine-phosphate pyrophosphorylase [Brucella sp. NVSL 07-0026]
Length = 203
Score = 37.8 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 21/183 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G + + V D + IR+ R + DC L+++
Sbjct: 13 SADW------LERMVPLGIRLVQLRVKDKADAQLRA----EIRAARDICAAH-DCQLIVN 61
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + D GCD I E L I A G K GV+ + E + V
Sbjct: 62 D---YWKLALDEGCDFIHLGQEDLDGAD--LDAIRAGGLKLGVSSHDEAELDRASSVRP- 115
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + + P + + E +P++ + KA IG +I L GG++ + AGA
Sbjct: 116 -DYIALGPIYPTILKKMKWHEQGLPRLGEWKARIG--NIPLVGIGGLSVERAPGVFAAGA 172
Query: 192 DLL 194
D++
Sbjct: 173 DIV 175
>gi|206561055|ref|YP_002231820.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia cenocepacia
J2315]
gi|198037097|emb|CAR53018.1| putative nicotinate-nucleotide pyrophosphorylase [Burkholderia
cenocepacia J2315]
Length = 293
Score = 37.8 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+ PV + + + ++D L G L T+ +R+A + +++ L
Sbjct: 197 AAFALKSGVPVQVEVETLAQLDTALAH----GAQSVLLDNFTLDMMREAVRVADGKAV-L 251
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 252 EVSGGVNFETVRTFAETGVD 271
>gi|150399213|ref|YP_001322980.1| thiamine-phosphate pyrophosphorylase [Methanococcus vannielii SB]
gi|166228558|sp|A6UPE6|THIE_METVS RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|150011916|gb|ABR54368.1| thiamine-phosphate pyrophosphorylase [Methanococcus vannielii SB]
Length = 206
Score = 37.8 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLKK 218
K L ++ + GG+ N+K ++ G + VV S+ I AK++N++ K
Sbjct: 146 LKELSNCSNLPVVAIGGINHENVKEVLMCGVSGVAVV-SAIVGANDIIFSAKKMNEIIK 203
>gi|317488453|ref|ZP_07947005.1| histidine biosynthesis protein [Eggerthella sp. 1_3_56FAA]
gi|316912440|gb|EFV33997.1| histidine biosynthesis protein [Eggerthella sp. 1_3_56FAA]
Length = 129
Score = 37.8 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I + ++ K + +EV GGV + I L AG +V+G+S A
Sbjct: 64 ENIAIVERIMRKTLLKVEVGGGVRSLDTIARLADAGVSRVVLGTSLVADPDFAEAA 119
>gi|242371582|ref|ZP_04817156.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
M23864:W1]
gi|242350702|gb|EES42303.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
M23864:W1]
Length = 212
Score = 37.8 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I++ + + + GG+ N+ S+ +A AD + V S+ K
Sbjct: 154 IKKLREYLD--DFPIVAIGGINESNVASIAEADADGISVISAISRSDNIDKTVK 205
>gi|227488406|ref|ZP_03918722.1| protein of hypothetical function DUF558 [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227543018|ref|ZP_03973067.1| protein of hypothetical function DUF558 [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227091620|gb|EEI26932.1| protein of hypothetical function DUF558 [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227181240|gb|EEI62212.1| protein of hypothetical function DUF558 [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 240
Score = 37.8 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 57/171 (33%), Gaps = 31/171 (18%)
Query: 30 GAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDII 89
G +H DV VP + VI++L L+ G +
Sbjct: 58 GKDVLHVDVTSREEVPPPNPQVTVIQALPKSERQELTVDLLTQ------------GGADV 105
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPE---------TPVAILEDVIDEIDMILIMT 140
E+ I + + VA + T L++ +D +D++L++
Sbjct: 106 IVPWEAERCIAKWQPKKAKKWENAAVAAAKQSRRARLPLITKPNALDEALDGVDLVLVLH 165
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
L E + ++R+ +IG GG++ ++ AGA
Sbjct: 166 EE---ASVPLAEVDLSQVRRIALVIGPE-------GGLSPAEVERFRAAGA 206
>gi|52082338|ref|YP_081129.1| thiamine-phosphate pyrophosphorylase [Bacillus licheniformis ATCC
14580]
gi|52787728|ref|YP_093557.1| thiamine-phosphate pyrophosphorylase [Bacillus licheniformis ATCC
14580]
gi|81825151|sp|Q65DK0|THIE_BACLD RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|52005549|gb|AAU25491.1| thiamine-phosphate pyrophosphorylase [Bacillus licheniformis ATCC
14580]
gi|52350230|gb|AAU42864.1| ThiE [Bacillus licheniformis ATCC 14580]
Length = 224
Score = 37.8 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 161 AKALIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I ++ I + V GG+T N +++AGAD + V S+ A+ ++
Sbjct: 157 LIQEIRRQGIGIPVVGIGGITVENCVPVIEAGADGISVISAISKAADPKQAAEAFSE 213
>gi|289551681|ref|YP_003472585.1| Pyridoxine biosynthesis glutamine amidotransferase, synthase
subunit [Staphylococcus lugdunensis HKU09-01]
gi|315659141|ref|ZP_07912006.1| pyridoxine biosynthesis protein [Staphylococcus lugdunensis M23590]
gi|289181212|gb|ADC88457.1| Pyridoxine biosynthesis glutamine amidotransferase, synthase
subunit [Staphylococcus lugdunensis HKU09-01]
gi|315495865|gb|EFU84195.1| pyridoxine biosynthesis protein [Staphylococcus lugdunensis M23590]
Length = 295
Score = 37.8 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|297740117|emb|CBI30299.3| unnamed protein product [Vitis vinifera]
Length = 317
Score = 37.8 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ L+V GG+ S N ++ GA ++V S FN G++ +RL DL
Sbjct: 129 EALHAYPGGLQVGGGINSENALRYIEEGASHVIVTSYVFN-NGQMD-LERLKDL 180
>gi|218290181|ref|ZP_03494340.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Alicyclobacillus acidocaldarius LAA1]
gi|218239776|gb|EED06966.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Alicyclobacillus acidocaldarius LAA1]
Length = 208
Score = 37.8 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 160 QAKALIGK-RSISLEVDGGVTSRNIKSLVQAGADLLV-VGSSFF-----NQKGEISYAKR 212
+ L G + + V GGV+ N ++ + AGA + V VGSS F + + S AKR
Sbjct: 140 YLRDLRGPFKDLKAMVTGGVSEDNARAFLDAGA-VAVGVGSSLFPKADLDARDYASIAKR 198
Query: 213 LNDLKK 218
L +
Sbjct: 199 AERLAR 204
>gi|134046123|ref|YP_001097609.1| modD protein [Methanococcus maripaludis C5]
gi|132663748|gb|ABO35394.1| modD protein [Methanococcus maripaludis C5]
Length = 283
Score = 37.8 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
T+ K + I ++++ GG+T +NI + G +++V S +F + +I
Sbjct: 221 PKTVEKFVKFAKEIN-PNVTVVAAGGITVQNIDEYAKTGVEVIVTSSLYFGKAADIKAI 278
>gi|237702758|ref|ZP_04533239.1| thiazole biosynthesis protein ThiG [Escherichia sp. 3_2_53FAA]
gi|115515377|gb|ABJ03452.1| thiazole biosynthesis protein ThiG [Escherichia coli APEC O1]
gi|226903071|gb|EEH89330.1| thiazole biosynthesis protein ThiG [Escherichia sp. 3_2_53FAA]
Length = 342
Score = 37.8 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A K G + P + ++E+ +M + G
Sbjct: 184 IHPDARWLLPDPIETLKAAEKLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 243
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 244 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 298
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 299 PVNMAKAFRLAVEAGL 314
>gi|70607180|ref|YP_256050.1| indole-3-glycerol-phosphate synthase [Sulfolobus acidocaldarius DSM
639]
gi|78099271|sp|Q4J8X3|TRPC_SULAC RecName: Full=Indole-3-glycerol phosphate synthase; Short=IGPS
gi|68567828|gb|AAY80757.1| indole-3-glycerol phosphate synthase [Sulfolobus acidocaldarius DSM
639]
Length = 248
Score = 37.8 bits (87), Expect = 1.00, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 8 VPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDC 67
PS + D + E + + GA I + + F + + + +
Sbjct: 56 SPSGINVDI-NIIEYVKFMENNGATGISV-LTEEKF---FNGSYNDLELVAKNVKLPILM 110
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
+ S + I+ + G D+I + R L +++ K G+ +
Sbjct: 111 KDFVVS-EKQIDSAYNIGADVILLIAKILT--ERELVSLYKYAKSYGL--------EAIV 159
Query: 128 DVIDEIDMILIMTVNPGFGGQQ-----LIESTIPKIRQAKALIGKRSISLEVDGGV-TSR 181
++ DE D+ + + N F G +E ++ + ++ +I K + + + G+ T +
Sbjct: 160 EISDEEDLDVALRGNYDFIGVNARNLESLEVSLDRTKKLLQMIPKDRLKI-AESGISTRQ 218
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEI 207
+I+ L +GAD ++G+S + +I
Sbjct: 219 DIEELRASGADAFLIGTSLLKDQNKI 244
>gi|332160430|ref|YP_004297007.1| quinolinate phosphoribosyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318607109|emb|CBY28607.1| quinolinate phosphoribosyltransferase [decarboxylating] [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664660|gb|ADZ41304.1| quinolinate phosphoribosyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330860125|emb|CBX70448.1| nicotinate-nucleotide pyrophosphorylase [carboxylating] [Yersinia
enterocolitica W22703]
Length = 302
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
I K I+ + P+ + + ++++D L + G L +I KIR+A
Sbjct: 195 IKEAVAKA-FWIHADVPIEVEVESLNQLDQAL----DAGADIIMLDNFSIEKIREAVNKR 249
Query: 166 GK-----RSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ S LEV G VT +++ + G D + VG
Sbjct: 250 NEFAKTQNSAQLEVSGNVTLETLRNYAETGIDFISVG 286
>gi|225440880|ref|XP_002276674.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 307
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ L+V GG+ S N ++ GA ++V S FN G++ +RL DL
Sbjct: 119 EALHAYPGGLQVGGGINSENALRYIEEGASHVIVTSYVFN-NGQMD-LERLKDL 170
>gi|302875040|ref|YP_003843673.1| nicotinate-nucleotide pyrophosphorylase [Clostridium cellulovorans
743B]
gi|307690341|ref|ZP_07632787.1| nicotinate-nucleotide pyrophosphorylase [Clostridium cellulovorans
743B]
gi|302577897|gb|ADL51909.1| nicotinate-nucleotide pyrophosphorylase [Clostridium cellulovorans
743B]
Length = 279
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H E++ +++S+ E V LE V + + G L
Sbjct: 166 HIEAAGGVKKSVELAKKASP---FVRKIEVEVESLEMVNEAL--------EAGADIIMLD 214
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ I++A +LI ++I +EV G V+ NI L + G D +
Sbjct: 215 NMGLDTIKKAVSLIADKAI-IEVSGNVSLDNIGLLAKTGVDYI 256
>gi|254167617|ref|ZP_04874468.1| Nicotinate phosphoribosyltransferase family, putative
[Aciduliprofundum boonei T469]
gi|289596987|ref|YP_003483683.1| Quinolinate phosphoribosyl transferase [Aciduliprofundum boonei
T469]
gi|197623426|gb|EDY35990.1| Nicotinate phosphoribosyltransferase family, putative
[Aciduliprofundum boonei T469]
gi|289534774|gb|ADD09121.1| Quinolinate phosphoribosyl transferase [Aciduliprofundum boonei
T469]
Length = 391
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 158 IRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
IR+ + + G + + + V GG+ +++ L AGA VG+S N K I YA +
Sbjct: 249 IREVRWELDIRGYKDVGIFVSGGLDEDSVRRLRNAGATGFGVGTSLSNAKT-IDYAMDIV 307
Query: 215 DLKKSALA 222
+++ +A
Sbjct: 308 EIEGKPMA 315
>gi|39996240|ref|NP_952191.1| Ser/Thr protein phosphatase family protein [Geobacter
sulfurreducens PCA]
gi|39983120|gb|AAR34514.1| Ser/Thr protein phosphatase family protein [Geobacter
sulfurreducens PCA]
gi|298505251|gb|ADI83974.1| 2',3'-cyclic nucleotide 2'-phosphodiesterase YmdB [Geobacter
sulfurreducens KN400]
Length = 262
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 158 IRQAKALIGKRSISLEVD-------G-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+R+ L+ + L V G G+T K L G D+L G+ ++++ S+
Sbjct: 21 VRELHRLVDHHRVDLVVANGENSAGGFGITEETAKELFSLGIDVLTSGNHIWDKRESFSF 80
Query: 210 AKRLNDLKKSA 220
R L + A
Sbjct: 81 IGREERLVRPA 91
>gi|269793128|ref|YP_003318032.1| Quinolinate phosphoribosyl transferase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100763|gb|ACZ19750.1| Quinolinate phosphoribosyl transferase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 349
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
PG G + + ++R ++ G +++ V GG+ I+ L +AGA VGS
Sbjct: 253 TPGERG-GVTPELVREVRYRLSMAGYGHVTVFVSGGLNPDRIRVLAEAGAGGFGVGSYI 310
>gi|85860739|ref|YP_462941.1| pyrophosphorylase ModD [Syntrophus aciditrophicus SB]
gi|85723830|gb|ABC78773.1| pyrophosphorylase ModD [Syntrophus aciditrophicus SB]
Length = 307
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
E + AK L S+ + GG+ + N G D LV S + K E
Sbjct: 223 EELAEFVSAAKQL--NPSLEISAAGGINASNAAEYAATGVDFLVT-SWIYFGKPE 274
>gi|16081246|ref|NP_393552.1| orotidine 5'-phosphate decarboxylase [Thermoplasma acidophilum DSM
1728]
gi|10639219|emb|CAC11221.1| orotidine-5'-monophosphate decarboxylase (pyrF) [Thermoplasma
acidophilum]
Length = 215
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
++AGADL++VG S + ++ A+ +N+ + A A++
Sbjct: 174 ASDAIKAGADLVIVGRSIYESADPVTAAEAINE--EIAKAVE 213
>gi|328850436|gb|EGF99601.1| hypothetical protein MELLADRAFT_53976 [Melampsora larici-populina
98AG31]
Length = 252
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF-NQKGEISYAKRLNDLK 217
+AL R +++ GGV N + + AGA+ ++V S F K ++LN+L
Sbjct: 68 AALRALDSWRG-HIQLGGGVDLSNAEKWIDAGAEKIIVTSFLFPGCKFSEDRLRQLNELV 126
Query: 218 -KSALAID 224
K+ L ID
Sbjct: 127 GKNKLVID 134
>gi|299116863|emb|CBN74975.1| Tryptophan synthase (alpha / beta chains) [Ectocarpus siliculosus]
Length = 681
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 8/126 (6%)
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID-MILIMTVNPGFGGQQLIESTI 155
+ + P T + + D + ++V G + + +
Sbjct: 165 DDAHDFISKCQEYHLSFIPLVTPTTTDDRIPFIASTTDSFVYCVSVTGVTGARAHLPIGL 224
Query: 156 PK-IRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K IR+ + GK L V G G++S V AD +VVGS+F N E S R+
Sbjct: 225 EKFIRRVRRATGKP---LSV-GFGISSTEQVQAVAGIADGVVVGSAFMNAIDEASRM-RI 279
Query: 214 NDLKKS 219
+K+
Sbjct: 280 EGERKA 285
>gi|158428196|pdb|2DZU|A Chain A, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(D110n) From A Hyperthermophile, Pyrococcus Furiosus
gi|158428197|pdb|2DZU|B Chain B, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(D110n) From A Hyperthermophile, Pyrococcus Furiosus
Length = 248
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
+++ R +S + + + + + +G + I H +
Sbjct: 69 FWIVKEFRRHSSTPI-VLMTYYNPIYRAGVRNFLAEAKASGVNGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IAREEGIKTVFLAAPNTPDERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
+L
Sbjct: 243 EEL 245
>gi|172059605|ref|YP_001807257.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
ambifaria MC40-6]
gi|171992122|gb|ACB63041.1| KDPG and KHG aldolase [Burkholderia ambifaria MC40-6]
Length = 225
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 20/151 (13%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR ++ + DAG +I I ++
Sbjct: 66 IAALRRALPDDMIVGAGTVLRAEFVDRVQDAGGTLIVM-------PHSDAAVIR-RARER 117
Query: 114 GVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+A P TP + + D +L M + +P ++ +A+I +
Sbjct: 118 GLASAPGVATPTEAFAALANGAD-VLKMF--------PAEQLGVPVVKAWRAVIDRAVPL 168
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
L V GG+T N++ + AGA+ +GS+ +
Sbjct: 169 LPV-GGITPDNMQPFLAAGANGFGLGSALYR 198
>gi|298674952|ref|YP_003726702.1| nicotinate-nucleotide pyrophosphorylase [Methanohalobium
evestigatum Z-7303]
gi|298287940|gb|ADI73906.1| nicotinate-nucleotide pyrophosphorylase [Methanohalobium
evestigatum Z-7303]
Length = 277
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
I K K ++ +E+ GG+ N++ + GAD++
Sbjct: 219 IEILKNKNLKNNVIIEISGGINPENLEDYAKTGADII 255
>gi|256371876|ref|YP_003109700.1| tryptophan synthase, alpha subunit [Acidimicrobium ferrooxidans DSM
10331]
gi|256008460|gb|ACU54027.1| tryptophan synthase, alpha subunit [Acidimicrobium ferrooxidans DSM
10331]
Length = 269
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 87/224 (38%), Gaps = 28/224 (12%)
Query: 20 GEEISNITKAGAKQIHFDV------MDGCFVPN-----ISFGADVIRSLRSYSDSVFDCH 68
+++ + + GA I + MDG + + G V ++ + + V
Sbjct: 32 EDDVVALAEGGADAIEIGIPFSDPSMDGPTIQRASEVALQRGTTVAGTIAALRNLVVGVP 91
Query: 69 LMISS---------IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP 119
L++ + ++ +A+AG + S R +G +T + P
Sbjct: 92 LVVMTYYNLLYHQGLERAAGRLAEAGVAGVIIPDLSIEEAEPWWRAAREVGLETVQLVAP 151
Query: 120 ETPVAILEDVIDEIDMIL----IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVD 175
TP A +E ++ + + +M V G + + T +I A + ++ L
Sbjct: 152 STPPARMERIVRAAEGFVYAVGLMGVT---GERDQLAETATEIAGRLAGRAELAV-LVGI 207
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G + + ++V+AGAD VVGS+ + E + L + ++
Sbjct: 208 GVSSPEHAAAVVEAGADGAVVGSAIVRRVLEGAPPAELGEFVRA 251
>gi|213019464|ref|ZP_03335270.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|212994886|gb|EEB55528.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 492
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI---- 151
S ++ +++ I M T + T E +ID + + + PG I
Sbjct: 252 SENVISTIKEIKKMYPNTQLIGGNITTKEAAEALIDAGVDAVKVGIGPGSICTTRIVTGV 311
Query: 152 -ESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFF 201
I+ + +++ L DGG+ ++ + AGAD +++GS F
Sbjct: 312 GMPQFSAIKNIAEVCKTKNVRLIADGGIKYSGDVAKAIAAGADTVMIGS-IF 362
>gi|118576999|ref|YP_876742.1| phosphate-binding enzymes, TIM-barrel fold [Cenarchaeum symbiosum
A]
gi|118195520|gb|ABK78438.1| phosphate-binding enzymes, TIM-barrel fold [Cenarchaeum symbiosum
A]
Length = 261
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNI-KSLVQAGADLLVVGS 198
IR + + GG+ + +AGAD +V+G+
Sbjct: 196 PVKPEMIRAVREAFD--GFLIVG-GGIRDEEAARRASEAGADAIVIGT 240
>gi|73666639|ref|YP_302655.1| nicotinate-nucleotide pyrophosphorylase [carboxylating] [Ehrlichia
canis str. Jake]
gi|72393780|gb|AAZ68057.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Ehrlichia
canis str. Jake]
Length = 275
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 17/117 (14%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI-DEIDMILIMTVNPGFGGQQL 150
H S I +++ + K VAI + ++ +E+ + + +DMIL+ ++ G
Sbjct: 166 HIASCGSITLAIQRLRMNLKNAYVAIECDN-ISQIEESLSNNVDMILLDNMSIGE----- 219
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG--SSFFNQKG 205
I+QA ++ +S+ LEV G V RN++S+ G D + +G ++ F K
Sbjct: 220 -------IKQAVEIVNGKSV-LEVSGCVNIRNVRSIALTGVDYISIGCITNSFKNKD 268
>gi|94499310|ref|ZP_01305848.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Oceanobacter sp. RED65]
gi|94428942|gb|EAT13914.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Oceanobacter sp. RED65]
Length = 257
Score = 37.8 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GGV N + AGA ++V S+ F + E S+ +RL +KK
Sbjct: 81 GGVNRENASDYLNAGASHVIVTSALF-ENDEFSF-ERLEAIKK 121
>gi|322707214|gb|EFY98793.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Metarhizium anisopliae ARSEF 23]
Length = 259
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
AK + L+V GG+ +N K V AGA +++ S F
Sbjct: 68 AKQALQTWPGHLQVGGGINDKNAKEWVDAGASKVIITSYLF 108
>gi|312136590|ref|YP_004003927.1| pyridoxal phosphate synthase yaad subunit [Methanothermus fervidus
DSM 2088]
gi|311224309|gb|ADP77165.1| pyridoxal phosphate synthase yaaD subunit [Methanothermus fervidus
DSM 2088]
Length = 293
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + ++Q GAD + VGS F K +YAK +
Sbjct: 212 GGIATPADAALMMQLGADGVFVGSGIFKSKNPEAYAKAI 250
>gi|326387794|ref|ZP_08209400.1| thiamine-phosphate pyrophosphorylase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207840|gb|EGD58651.1| thiamine-phosphate pyrophosphorylase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 216
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + + GG+T N LV+AGAD L V ++ + + + +
Sbjct: 149 LRWWSSVFELPVVAIGGITPENCVPLVEAGADFLAVSNAVWGGDEVAAVQAFARAMAE 206
>gi|257052247|ref|YP_003130080.1| tryptophan synthase subunit alpha [Halorhabdus utahensis DSM 12940]
gi|256691010|gb|ACV11347.1| tryptophan synthase, alpha subunit [Halorhabdus utahensis DSM
12940]
Length = 279
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 7/130 (5%)
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+ A+AG + + G + P T L+ ++D++
Sbjct: 111 PRPFVKRAAEAGIAGLVVPDLPAEEADPLRDACDEYGLDLVFIVAPTTRGDRLKTIMDQV 170
Query: 134 DMILIMTVNPGFGGQQ--LIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAG 190
+ + G G + + + T + + + +++ G+ T + + +V AG
Sbjct: 171 SGYVYVQARLGTTGARDDVSDQTDESLARLREWDVPKAVGF----GIKTGEHAERIVSAG 226
Query: 191 ADLLVVGSSF 200
AD ++VGS+
Sbjct: 227 ADGIIVGSAL 236
>gi|192362230|ref|YP_001981389.1| thiamine-phosphate pyrophosphorylase [Cellvibrio japonicus Ueda107]
gi|190688395|gb|ACE86073.1| thiamine-phosphate pyrophosphorylase [Cellvibrio japonicus Ueda107]
Length = 214
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I +AKA + ++L V GG+T N L+ AGAD
Sbjct: 158 ISEAKAKFPQ--VTLVVIGGITLDNAAVLLDAGAD 190
>gi|190570948|ref|YP_001975306.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|190357220|emb|CAQ54638.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
Length = 495
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI---- 151
S ++ +++ I M T + T E +ID + + + PG I
Sbjct: 255 SENVISTIKEIKKMYPNTQLIGGNITTKEAAEALIDAGVDAVKVGIGPGSICTTRIVTGV 314
Query: 152 -ESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFF 201
I+ + +++ L DGG+ ++ + AGAD +++GS F
Sbjct: 315 GMPQFSAIKNIAEVCKTKNVRLIADGGIKYSGDVAKAIAAGADTVMIGS-IF 365
>gi|167551143|ref|ZP_02344898.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205324061|gb|EDZ11900.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 411
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIAMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|126654195|ref|ZP_01725996.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Bacillus sp. B14905]
gi|126589334|gb|EAZ83488.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Bacillus sp. B14905]
Length = 258
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L+V GG+T+ N + + AGA ++V S F G++ +RL L K
Sbjct: 81 LQVGGGITAANAQKYIDAGASHVIVTSYIF-HDGKLD-LERLQHLNK 125
>gi|125546046|gb|EAY92185.1| hypothetical protein OsI_13901 [Oryza sativa Indica Group]
Length = 324
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 115 VAINPETPVAILEDV-IDEIDMILIMTVNPGFGG--QQLIEST---IPKIRQA--KALIG 166
+ P TP ++ + + +++VN G G Q + + +I+Q KA+
Sbjct: 210 LLTTPTTPPDRMKAITAASGGFVYLVSVN-GVTGSRQDVNPRVEHLLQEIKQVTDKAVCV 268
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKKSALAI 223
IS T +++ + + GAD +++GS+ Q GE + K+ L L+K A ++
Sbjct: 269 GYGIS-------TPDHVRQIAEWGADGVIIGSAMVRQLGEAASPKQGLKRLEKYARSL 319
>gi|262273798|ref|ZP_06051611.1| quinolinate phosphoribosyltransferase [decarboxylating] [Grimontia
hollisae CIP 101886]
gi|262222213|gb|EEY73525.1| quinolinate phosphoribosyltransferase [decarboxylating] [Grimontia
hollisae CIP 101886]
Length = 301
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 105 TIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST 154
I G+A +NP PV + + +DE+ ++ G L T
Sbjct: 188 LIKENHIIACGGIAGAIATAKQLNPGKPVEVETESLDELQQ----AIDAGADIVMLDNFT 243
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+R+A AL R ++LEV G VT I+ Q G D + VG
Sbjct: 244 TEMMREAVALNKGR-VALEVSGNVTLDTIRGFAQTGVDYISVG 285
>gi|170703896|ref|ZP_02894576.1| KDPG and KHG aldolase [Burkholderia ambifaria IOP40-10]
gi|170131192|gb|EDS99839.1| KDPG and KHG aldolase [Burkholderia ambifaria IOP40-10]
Length = 225
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 20/158 (12%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR ++ + DAG +I I ++
Sbjct: 66 IAALRRALPDDMIVGAGTVLRAEFVDRVQDAGGTLIVM-------PHSDAAVIR-RARER 117
Query: 114 GVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+A P TP + + D +L M + +P ++ +A+I +
Sbjct: 118 GLASAPGVATPTEAFAALANGAD-VLKMF--------PAEQLGVPVVKAWRAVIDRAVPL 168
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
L V GG+T N++ + AGA+ +GS+ +
Sbjct: 169 LPV-GGITPDNMQPFLAAGANGFGLGSALYRPGQSADA 205
>gi|149913636|ref|ZP_01902169.1| thiamine-phosphate pyrophosphorylase [Roseobacter sp. AzwK-3b]
gi|149812756|gb|EDM72585.1| thiamine-phosphate pyrophosphorylase [Roseobacter sp. AzwK-3b]
Length = 198
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 10/126 (7%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ + D CD + E + I G + G++ + + + + D
Sbjct: 61 DYWKLAMDLDCDWVHLGQEDLD--VADMAAIRRAGLRIGISTHDRDELD--RALGHDPDY 116
Query: 136 ILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + + P + + + + K+ + K LIG I L GG++ +AGAD++
Sbjct: 117 VALGPIYPTKLKKMKWHQQGLEKLSEWKGLIG--DIPLVAIGGMSVERAPGAFEAGADIV 174
Query: 195 VVGSSF 200
S+
Sbjct: 175 ---SAV 177
>gi|52424075|ref|YP_087212.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Mannheimia
succiniciproducens MBEL55E]
gi|52306127|gb|AAU36627.1| SgbH protein [Mannheimia succiniciproducens MBEL55E]
Length = 225
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ-AGADLLVVGSSFFNQK 204
G+ + I K++Q + L + GG+ I A + + G + +K
Sbjct: 153 AGKGWMPEDIEKMKQL----ESLGLELSITGGIVPEEIHLFKDIKKAKVFIAGRALVGEK 208
Query: 205 GEISYAKRLNDL 216
G+ + A +++
Sbjct: 209 GQQTAAAIRSEI 220
>gi|330998069|ref|ZP_08321897.1| nicotinate-nucleotide diphosphorylase [Paraprevotella xylaniphila
YIT 11841]
gi|329569158|gb|EGG50949.1| nicotinate-nucleotide diphosphorylase [Paraprevotella xylaniphila
YIT 11841]
Length = 320
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + + I ++ H K+ G + E V +++ +DM G
Sbjct: 207 HVDFAGGIANAINRCHEYLKEKGKDLKIEIEVRNFDELQQVLDM-------GGVDRIMFD 259
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
++ R+A +IG R E GG+T ++ + G D + VG
Sbjct: 260 NFSVEDTRKAVKMIGGR-FETESSGGITFDTLRDYAECGVDFISVG 304
>gi|319957418|ref|YP_004168681.1| 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)
imidazole-4-carboxamide isomerase [Nitratifractor
salsuginis DSM 16511]
gi|319419822|gb|ADV46932.1| 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)
imidazole-4-carboxamide isomerase [Nitratifractor
salsuginis DSM 16511]
Length = 239
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ + ++ +N F G+ + +IR+ + ++ LE+ GG+ I+ + G D
Sbjct: 45 EWLHLVDLNGAFAGE---PKNLEQIRKIRENC---NLKLELGGGIRDEETIRMYLDLGVD 98
Query: 193 LLVVGS 198
L++GS
Sbjct: 99 RLILGS 104
>gi|294496629|ref|YP_003543122.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Methanohalophilus mahii DSM 5219]
gi|292667628|gb|ADE37477.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Methanohalophilus mahii DSM 5219]
Length = 278
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 23/47 (48%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ + + + + +EV GG+ + N+ + G D++ +GS +
Sbjct: 218 VEKLRHEGLRNKVIVEVSGGINTENLAEYAKTGIDVISMGSLIHKAQ 264
>gi|308805603|ref|XP_003080113.1| N'-5'-phosphoribosyl-formimino-5-aminoi (ISS) [Ostreococcus tauri]
gi|116058573|emb|CAL54280.1| N'-5'-phosphoribosyl-formimino-5-aminoi (ISS) [Ostreococcus tauri]
Length = 278
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
L++ GGV N K + AGA ++V S F + L+++ ++
Sbjct: 94 LQIGGGVNPSNAKQFLDAGASHVIVTSYVFR--DGMLNEDALSEMVRA 139
>gi|87120873|ref|ZP_01076765.1| KDPG and KHG aldolase [Marinomonas sp. MED121]
gi|86163711|gb|EAQ64984.1| KDPG and KHG aldolase [Marinomonas sp. MED121]
Length = 213
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 23/186 (12%)
Query: 55 RSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTG 114
+L S+ + L I ++ D + + R + + G
Sbjct: 30 EALIEAGFSILEVPLNSPEPFKSIEMLQQKYGDKALI---GAGTVMRKDQVDKLVEIGAG 86
Query: 115 VAINPETPVAILEDV----IDEIDMILIMTV-----NPGFGGQQLIE---STIPKIRQAK 162
+ + P T V ++ + + G +L T PK+ A
Sbjct: 87 LMVCPHTDVELIRAAKAAGLYAFPGFFTASEAFAAMEAGADAIKLFPAEAMTSPKVISAL 146
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN--------QKGEISYAKRLN 214
+ +S+ + GGVT N+ S + AGA +GS+ + K ++
Sbjct: 147 CAVVPKSMRICPVGGVTPDNMSSYIDAGAQGFGLGSALYKAGQNVEVTAKNAKAFVTGWK 206
Query: 215 DLKKSA 220
+ ++A
Sbjct: 207 AISEAA 212
>gi|327439557|dbj|BAK15922.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
isomerase [Solibacillus silvestris StLB046]
Length = 261
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L++ GG+T+ N + + AGA ++V S F G++ RL L K
Sbjct: 86 LQIGGGITADNAQKYIDAGASHVIVTSYIF-HDGQLD-MDRLEQLVK 130
>gi|257790837|ref|YP_003181443.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Eggerthella lenta DSM 2243]
gi|325832028|ref|ZP_08165125.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Eggerthella sp. HGA1]
gi|257474734|gb|ACV55054.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Eggerthella lenta DSM 2243]
gi|325486349|gb|EGC88801.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Eggerthella sp. HGA1]
Length = 257
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I + ++ K + +EV GGV + I L AG +V+G+S A
Sbjct: 61 ENIAIVERIMRKTLLKVEVGGGVRSLDTIARLADAGVSRVVLGTSLVADPDFAEAA 116
>gi|332982224|ref|YP_004463665.1| Quinolinate phosphoribosyl transferase [Mahella australiensis 50-1
BON]
gi|332699902|gb|AEE96843.1| Quinolinate phosphoribosyl transferase [Mahella australiensis 50-1
BON]
Length = 344
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + +++ G + + V GG+ I+ L QAG D VGS
Sbjct: 257 PALVEEVKARLCKAGFPHVKIIVSGGLYPEKIRQLAQAGVDSFGVGSYI 305
>gi|242373205|ref|ZP_04818779.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
M23864:W1]
gi|242349156|gb|EES40757.1| 3-hexulose-6-phosphate synthase [Staphylococcus epidermidis
M23864:W1]
gi|282166231|gb|ADA80248.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
epidermidis]
Length = 211
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q S + +R K++I + + V GG+ IKS+ DL++VG
Sbjct: 131 IAVHTGYDLQAKGVSPLESLRTVKSVIS--NSKVAVAGGIKPDTIKSVAVEQPDLIIVGG 188
Query: 199 SFFNQKGEISYAKRLNDL 216
N + AK+ D+
Sbjct: 189 GIANADDPKAAAKQCRDI 206
>gi|257063379|ref|YP_003143051.1| hypothetical protein Shel_06430 [Slackia heliotrinireducens DSM
20476]
gi|256791032|gb|ACV21702.1| hypothetical protein Shel_06430 [Slackia heliotrinireducens DSM
20476]
Length = 293
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 21/103 (20%)
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN----------------PGFGGQQLI 151
M GV N + +E + +D+ +++T++ G +
Sbjct: 166 EMQGCAGVVCNNTSTPETIESIRCHVDIPVVVTISKYDEYAAAQIAAGATIVNVAGGK-- 223
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+T + Q +A + I + GG +I+ + AGAD +
Sbjct: 224 -NTADVVAQVRAAYPE--IPIMASGGKNGDSIRRTIAAGADAI 263
>gi|15669227|ref|NP_248032.1| tryptophan synthase alpha subunit TrpA [Methanocaldococcus
jannaschii DSM 2661]
gi|1591691|gb|AAB99041.1| tryptophan synthase alpha subunit (trpA) [Methanocaldococcus
jannaschii DSM 2661]
Length = 284
Score = 37.8 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + +AG I G + P TP L+ ++++
Sbjct: 115 EEFVKKCKEAGVSGIIVPDLPIEEADSLYNYCKKYGVDLIFLVAPTTPDERLKKILEKCS 174
Query: 135 MILIMTVNPGFGG--QQLIESTIPKIRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAG 190
+ + G G +++ E T I++ K + G G++ +++ + +
Sbjct: 175 GFVYVVSVTGITGAREKVAEETKELIKRVKKFSKIPACV----GFGISKREHVEEITEI- 229
Query: 191 ADLLVVGSSF 200
AD +VGS+
Sbjct: 230 ADGAIVGSAI 239
>gi|148556055|ref|YP_001263637.1| thiamine-phosphate pyrophosphorylase [Sphingomonas wittichii RW1]
gi|148501245|gb|ABQ69499.1| thiamine-phosphate pyrophosphorylase [Sphingomonas wittichii RW1]
Length = 255
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDLK 217
GG+T N L+ AGAD L V + +N G + + LK
Sbjct: 209 IGGITPANAAPLIAAGADFLAVSGAVWNAPEGPAAGVRAFAALK 252
>gi|115455921|ref|NP_001051561.1| Os03g0797400 [Oryza sativa Japonica Group]
gi|31126749|gb|AAP44669.1| putative indole-3-glycerol phosphate lyase [Oryza sativa Japonica
Group]
gi|108711559|gb|ABF99354.1| Indole-3-glycerol phosphate lyase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113550032|dbj|BAF13475.1| Os03g0797400 [Oryza sativa Japonica Group]
gi|215704212|dbj|BAG93052.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 115 VAINPETPVAILEDV-IDEIDMILIMTVNPGFGG--QQLIEST---IPKIRQA--KALIG 166
+ P TP ++ + + +++VN G G Q + + +I+Q KA+
Sbjct: 210 LLTTPTTPPDRMKAITAASGGFVYLVSVN-GVTGSRQDVNPRVEHLLQEIKQVTDKAVCV 268
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKKSALAI 223
IS T +++ + + GAD +++GS+ Q GE + K+ L L+K A ++
Sbjct: 269 GYGIS-------TPDHVRQIAEWGADGVIIGSAMVRQLGEAASPKQGLKRLEKYARSL 319
>gi|7676173|sp|Q60180|TRPA_METJA RecName: Full=Tryptophan synthase alpha chain
Length = 281
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 9/130 (6%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + +AG I G + P TP L+ ++++
Sbjct: 112 EEFVKKCKEAGVSGIIVPDLPIEEADSLYNYCKKYGVDLIFLVAPTTPDERLKKILEKCS 171
Query: 135 MILIMTVNPGFGG--QQLIESTIPKIRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAG 190
+ + G G +++ E T I++ K + G G++ +++ + +
Sbjct: 172 GFVYVVSVTGITGAREKVAEETKELIKRVKKFSKIPACV----GFGISKREHVEEITEI- 226
Query: 191 ADLLVVGSSF 200
AD +VGS+
Sbjct: 227 ADGAIVGSAI 236
>gi|291523344|emb|CBK81637.1| thiamine-phosphate diphosphorylase [Coprococcus catus GD/7]
Length = 211
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
KA+ SI + GG+T N+ L +G D + V S+ + QK K DLK++
Sbjct: 151 LKAICEAVSIPVVAIGGITQGNVVKLAGSGIDGVAVISAIYAQKD---IKKATADLKEAV 207
Query: 221 LAI 223
AI
Sbjct: 208 KAI 210
>gi|194444006|ref|YP_002043442.1| hypothetical protein SNSL254_A4534 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194402669|gb|ACF62891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
Length = 279
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 45/183 (24%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
EI I +AGA +H D D V H ++D++I
Sbjct: 122 ETEILEIARAGADGLHTHKSD----------------WDDLQDIVNLAHQYGLTVDAYIG 165
Query: 80 IIADAGCDIITFH-PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
D I PE + + ++ I +DMI +
Sbjct: 166 HPDDLHTFGIPARTPEEVASVAKRMQDI-------------------------GVDMIGL 200
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
MT G I I + +AL+G + +GG+ N K+ G ++LVVG
Sbjct: 201 MTGMSYEGVAAGDIPQMIK--DRLQALVGAVDVPTLAEGGINLANAKAFKDTGVNILVVG 258
Query: 198 SSF 200
++
Sbjct: 259 TAI 261
>gi|154484309|ref|ZP_02026757.1| hypothetical protein EUBVEN_02022 [Eubacterium ventriosum ATCC
27560]
gi|149734786|gb|EDM50703.1| hypothetical protein EUBVEN_02022 [Eubacterium ventriosum ATCC
27560]
Length = 284
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + ++++ V +E ++ +DM+ V G L
Sbjct: 172 HIGAAGSVEKAIQMAKEYAPF----------VRKIEVEVESLDMVRQ-AVEAGADIIMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+++A +I R+ +EV G VT NI LV G D + G
Sbjct: 221 NMDHDVMKEAIEIIDGRA-EIEVSGNVTKENISKLVDLGVDYISSG 265
>gi|320162631|gb|EFW39530.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Capsaspora owczarzaki ATCC 30864]
Length = 272
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
A+ + L+V GG+T N + ++AGA ++V S F R+ L +
Sbjct: 75 AAARQALMAWPGKLQVGGGITDANAREWIEAGAAQVIVTSWLF--PNAQLAIDRVKSLSQ 132
Query: 219 S 219
+
Sbjct: 133 A 133
>gi|294499698|ref|YP_003563398.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium QM B1551]
gi|294349635|gb|ADE69964.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium QM B1551]
Length = 211
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I + Q+ ++ +I + + V GG+ + SL+Q AD+ ++G
Sbjct: 128 IFCHHISKDEQEKEGKSLSQIN-LRQYFHS-DAQIAVAGGINPASAASLLQMKADVAIIG 185
Query: 198 SSFFNQKGEISYAKRLNDL 216
S+ + +L
Sbjct: 186 SAITKSADVAKASAEFQNL 204
>gi|257438119|ref|ZP_05613874.1| thiamine-phosphate diphosphorylase [Faecalibacterium prausnitzii
A2-165]
gi|257199450|gb|EEU97734.1| thiamine-phosphate diphosphorylase [Faecalibacterium prausnitzii
A2-165]
Length = 210
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 24/58 (41%)
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
KA+ I + GG+ N+ L G + + + S+ F + + + L L +
Sbjct: 152 KAICDAVDIPVVAIGGIHKENLLRLKGTGVNGVALVSAIFGAEDIEAECRELKALAEQ 209
>gi|78223195|ref|YP_384942.1| nicotinate-nucleotide pyrophosphorylase [Geobacter metallireducens
GS-15]
gi|78194450|gb|ABB32217.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Geobacter
metallireducens GS-15]
Length = 276
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I R++ + + E + +V + + G L
Sbjct: 165 HIAAAGGISRAVSRARSYIPH---TLKIEVETESIAEVTEAL--------EAGADIIMLD 213
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+P + +A ALIG R++ +E GGV ++ + +AG D++ VG
Sbjct: 214 NMDLPTMTEAVALIGGRAL-VEASGGVNLETVRGIAEAGVDIISVG 258
>gi|219668549|ref|YP_002458984.1| thiamine-phosphate pyrophosphorylase [Desulfitobacterium hafniense
DCB-2]
gi|254784181|sp|B8FUD4|THIE_DESHD RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|219538809|gb|ACL20548.1| thiamine-phosphate pyrophosphorylase [Desulfitobacterium hafniense
DCB-2]
Length = 207
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + K + S+ + GG+ + N++ + + G D + V S+ +Q+ + AK L DL
Sbjct: 146 LAKLKEIKAGVSLPVVGIGGIGAANLRVVKETGIDGVSVISAILSQEDPCAAAKGLVDL 204
>gi|224372237|ref|YP_002606609.1| ModD protein [Nautilia profundicola AmH]
gi|223588745|gb|ACM92481.1| ModD protein [Nautilia profundicola AmH]
Length = 274
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ G QL + I ++ L +++I + GG+ N++ +AG D +V ++
Sbjct: 202 IEIGIDVLQLDKLDIETTKEIVKLAHEKNIKVISAGGININNVEEYAKAGVDSIVT-TAP 260
Query: 201 FNQKG 205
+ KG
Sbjct: 261 YFAKG 265
>gi|326799809|ref|YP_004317628.1| 50S ribosomal protein L10 [Sphingobacterium sp. 21]
gi|326550573|gb|ADZ78958.1| 50S ribosomal protein L10 [Sphingobacterium sp. 21]
Length = 172
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 14/74 (18%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRN---IKSLVQAGAD------LLVVGSSFFNQK 204
T+ K+ + +R I ++V ++N +K+L AG D +L S+ +
Sbjct: 32 TVAKVNNIRRKCFERGIKIQV-----AKNSLIVKALEAAGVDSEELKGVLKGASTILFSE 86
Query: 205 GEISYAKRLNDLKK 218
+ AK + +L+K
Sbjct: 87 TGNAPAKLIKELRK 100
>gi|269138883|ref|YP_003295584.1| bifunctional indole-3-glycerol phosphate [Edwardsiella tarda
EIB202]
gi|267984544|gb|ACY84373.1| bifunctional indole-3-glycerol phosphate [Edwardsiella tarda
EIB202]
gi|304558869|gb|ADM41533.1| Indole-3-glycerol phosphate synthase / Phosphoribosylanthranilate
isomerase [Edwardsiella tarda FL6-60]
Length = 458
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 59/189 (31%), Gaps = 33/189 (17%)
Query: 50 GADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS------- 102
G + Y D ++ ++ ++ + DA + E +
Sbjct: 287 GLIFVADSPRYVDIATARGIISAAPLRYVGVFRDAKPASVALAAERL-DLHAVQLHGGED 345
Query: 103 ---LRTIHAMGKKTGVAINPETPVAILEDV--IDEIDMILIMTVNPGFGGQQLIESTIPK 157
+ ++ + PV+ + +D L+ V PG G
Sbjct: 346 QAYIDSLRPLLPAACRIWK-ALPVSDTLPTARLHHVDRYLLDGVRPG-SGHPF------- 396
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG----SSFFNQKGEISYAKRL 213
+ L G + + GG+ + N ++ GA +G S+ + G ++L
Sbjct: 397 --DWRLLDGHPLGDIMLAGGIGADNCRAAADLGA----LGLDFNSAVESAPGRKDP-RKL 449
Query: 214 NDLKKSALA 222
++ LA
Sbjct: 450 RAAFQALLA 458
>gi|254482821|ref|ZP_05096058.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [marine gamma proteobacterium HTCC2148]
gi|214036902|gb|EEB77572.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [marine gamma proteobacterium HTCC2148]
Length = 222
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
GGV N ++AGA ++V S F + G+ S+ ++L +K+ A
Sbjct: 49 GGVNEDNAAGYLEAGASHVIVTSYLF-ESGQFSW-EKLRRMKREVGA 93
>gi|229083671|ref|ZP_04215995.1| Thiamine-phosphate pyrophosphorylase [Bacillus cereus Rock3-44]
gi|228699634|gb|EEL52295.1| Thiamine-phosphate pyrophosphorylase [Bacillus cereus Rock3-44]
Length = 218
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ + GG+T N S+++AGAD + V S+ K++ L
Sbjct: 170 TVPIVGIGGITVENAASVIEAGADGVSVISAISLADSPYESTKKMAGL 217
>gi|148257469|ref|YP_001242054.1| thiamine phosphate pyrophosphorylase [Bradyrhizobium sp. BTAi1]
gi|146409642|gb|ABQ38148.1| thiamine-phosphate diphosphorylase [Bradyrhizobium sp. BTAi1]
Length = 202
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 7/141 (4%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ AG + + E +R I G G++ + + + + E D
Sbjct: 62 DYWRAAIVAGAEHLHLGQEDLADAD--VRAIKQAGLTLGLSTHDDAELEN--ALAAEPDY 117
Query: 136 ILIMTVNPGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + + P + IPKI K +G +I L GG+ + AGAD +
Sbjct: 118 VALGPIFPTTLKAMRFAPQGIPKISVWKQRVG--NIPLVAIGGIKLEQAAEIFAAGADSI 175
Query: 195 VVGSSFFNQKGEISYAKRLND 215
V S + + D
Sbjct: 176 AVVSDVTQNADPDARVRAWLD 196
>gi|85081135|ref|XP_956663.1| hypothetical protein NCU00150 [Neurospora crassa OR74A]
gi|52000710|sp|Q7RXQ8|HIS4_NEUCR RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=5-proFAR isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|28917736|gb|EAA27427.1| hypothetical protein NCU00150 [Neurospora crassa OR74A]
Length = 257
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 122 PVAILEDVIDEIDM--ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
P A + + D+ ++ + PG L KA G L+V GG+T
Sbjct: 39 PPAYFAKLYRDNDLSGAHVIMLGPGNKEAALES--------LKAWPGG----LQVGGGIT 86
Query: 180 SRNIKSLVQAGADLLVVGSSFF 201
N + V+AGA+ +++ S F
Sbjct: 87 DANAREWVEAGAEKVIITSYLF 108
>gi|152985129|ref|YP_001350478.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
PA7]
gi|150960287|gb|ABR82312.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
PA7]
Length = 282
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 19/115 (16%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P+ PV + + +DE+ L
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAPAIAEARRIAPDKPVEVEVENLDELRQAL----EA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
G L E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 213 GADIVMLDELSLDDMRTAVALTAGRA-KLEASGGINESTLRNIAETGVDYISIGT 266
>gi|14602140|ref|NP_148688.1| tryptophan synthase subunit alpha [Aeropyrum pernix K1]
gi|7674392|sp|Q9Y8T3|TRPA_AERPE RecName: Full=Tryptophan synthase alpha chain
gi|5106256|dbj|BAA81567.1| tryptophan synthase alpha chain [Aeropyrum pernix K1]
Length = 252
Score = 37.8 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
E H+ + +G + + +P+ P L+ +++ + + P G + +
Sbjct: 120 ELPGHVEWYVEESRRLGMEPSLFASPKFPHRWLDRYRRLDPLLIYLGLQPATGVKLPLAF 179
Query: 154 TIPKIRQAKALIGK----RSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ ++ A+ ++G+ S++ + + +++AGAD +VVGS
Sbjct: 180 -LRNVKTARKIVGQVYMLAGFSIK-----SPEDALRVLEAGADAVVVGS 222
>gi|317485119|ref|ZP_07944001.1| modD protein [Bilophila wadsworthia 3_1_6]
gi|316923654|gb|EFV44858.1| modD protein [Bilophila wadsworthia 3_1_6]
Length = 281
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
GGVT N +++ G D+LV ++F + +I
Sbjct: 244 GGVTGENAEAVAATGVDVLVTTWAYFGKPADI 275
>gi|217965588|ref|YP_002351266.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes HCC23]
gi|254784184|sp|B8DET0|THIE_LISMH RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|217334858|gb|ACK40652.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes HCC23]
gi|307569861|emb|CAR83040.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes L99]
Length = 214
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ +N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINEKNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|158337734|ref|YP_001518910.1| nicotinate-nucleotide pyrophosphorylase [Acaryochloris marina
MBIC11017]
gi|158307975|gb|ABW29592.1| nicotinate-nucleotide pyrophosphorylase [Acaryochloris marina
MBIC11017]
Length = 288
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 43/105 (40%), Gaps = 12/105 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI--LIMTVNPGFGGQQ 149
H ++ I ++R + +AI ET LE V +D +IM N
Sbjct: 174 HIFAAGGIGEAIRRVRQHIPFP-LAIEVET--ETLEQVQQAVDHQADIIMLDN------M 224
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+E ++ ++ ++ +E G + + I+++ + G D +
Sbjct: 225 AVEQMQSAVKLIRSQCA-NTVKIEASGNINLQTIRAVAETGVDYI 268
>gi|124485929|ref|YP_001030545.1| hypothetical protein Mlab_1109 [Methanocorpusculum labreanum Z]
gi|124363470|gb|ABN07278.1| metal-binding transcription factor-like protein [Methanocorpusculum
labreanum Z]
Length = 367
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 21 EEISNIT-KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
+++ + KAGA +H D+MD G IR +R+ + + +SS D ++
Sbjct: 168 RQLARMLWKAGASILHVDLMDT--------GHTKIRQIRNSCPLIIIANNGVSSPDKMMD 219
Query: 80 IIADAGCDIITFHPESSPHIRRSL-RTIHAMGKKTG 114
A G D+++ +S + ++L R I A+ ++ G
Sbjct: 220 YFA-HGADLVSVARSASLSVLQTLDRYIRAVAEEIG 254
>gi|161598542|ref|YP_001573923.1| hypothetical protein pEDINA_p51 [Staphylococcus aureus]
gi|282918156|ref|ZP_06325903.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus D139]
gi|27531775|dbj|BAC54543.1| unnamed protein product [Staphylococcus aureus]
gi|270055220|gb|ACZ58713.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
aureus]
gi|270055484|gb|ACZ58977.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
aureus]
gi|282166068|gb|ADA80088.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase [Staphylococcus
aureus]
gi|282317997|gb|EFB48360.1| 3-hexulose-6-phosphate synthase [Staphylococcus aureus subsp.
aureus D139]
Length = 211
Score = 37.5 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q S + +R K++I + + V GG+ IKS+V DL++VG
Sbjct: 131 IAVHTGYDLQAKGVSPLESLRTVKSVIS--NSKVAVAGGIKPDTIKSVVVEQPDLIIVGG 188
Query: 199 SFFNQKGEISYAKRLNDL 216
N + AK+ D+
Sbjct: 189 GIANADDPKAAAKKCRDI 206
>gi|313500763|gb|ADR62129.1| ThiE [Pseudomonas putida BIRD-1]
Length = 207
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ QA+A + + + V GG+T N LV GADLL V F +R
Sbjct: 146 LEQARAQVK---LPIAVIGGITLDNAAPLVAHGADLLAVIHGLFGADSAQEVTRRARAF 201
>gi|255003909|ref|ZP_05278710.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
str. Virginia]
Length = 488
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----GVAINPETPVAILEDVIDEI 133
+ A D+I + H R ++TI + + N T L V +
Sbjct: 231 AEALIQAEADVIVVDA-AHGHSARVIQTIREIKALYPDAQVIGGNVATAAGALALVEAGV 289
Query: 134 DMILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLV 187
D + + + PG I I+ + + DGG+ +I +
Sbjct: 290 DAVKV-GIGPGSICTTRIVTGVGVPQFSAIKNVAEACKGTGVRVIADGGIKYSGDIAKSI 348
Query: 188 QAGADLLVVGSSFFNQKGE 206
AGAD++++GS F E
Sbjct: 349 AAGADVVMIGS-IFAGTDE 366
>gi|291288509|ref|YP_003505325.1| modD protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885669|gb|ADD69369.1| modD protein [Denitrovibrio acetiphilus DSM 12809]
Length = 280
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 144 GFGGQQLIESTIPKIRQ----AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
G G Q + K++Q + +I+LE GG+ ++ + G D+ V S
Sbjct: 208 GAGVIQFDKVKPDKLQQWIPLLRK--KYPNITLEAAGGINIETVEEYAKTGIDVAVT-SF 264
Query: 200 FFNQKGEISYAKRLNDL 216
+ K + + L
Sbjct: 265 VYTGK-PMDIEVEIKPL 280
>gi|159904767|ref|YP_001548429.1| modD protein [Methanococcus maripaludis C6]
gi|159886260|gb|ABX01197.1| modD protein [Methanococcus maripaludis C6]
Length = 283
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 152 ESTIPK-IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
T+ K ++ K + K +++ GG+T +NI + G +++V S +F + +I
Sbjct: 221 PKTVEKFVKTVKEINPK--VTVVAAGGITLQNIGEYAKTGVEVIVTSSLYFGKAADIKAI 278
>gi|86360610|ref|YP_472498.1| thiamine-phosphate pyrophosphorylase protein [Rhizobium etli CFN
42]
gi|86284712|gb|ABC93771.1| thiamine-phosphate pyrophosphorylase protein [Rhizobium etli CFN
42]
Length = 211
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 52/142 (36%), Gaps = 7/142 (4%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+ G D + E R+ R + G+++ E A ++ + + +
Sbjct: 73 VEAAIAIGADGLHIGQEDMD--ARTARELIGPEMILGLSVETEALAAAVDPDLVDYTGVG 130
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ P + + + L S+++ GG+ + ++ + AGA L V
Sbjct: 131 PVFATPTKADHK-QPIGFDGLARLVQLSPVPSVAI---GGLKAEHVAEVFAAGAKGLAVV 186
Query: 198 SSFFNQKGEISYAKRL-NDLKK 218
S+ + +R+ +++K
Sbjct: 187 SAICGTPDPEAATRRIAAEIRK 208
>gi|167035826|ref|YP_001671057.1| thiamine-phosphate pyrophosphorylase [Pseudomonas putida GB-1]
gi|189030581|sp|B0KJV8|THIE_PSEPG RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|166862314|gb|ABZ00722.1| thiamine-phosphate pyrophosphorylase [Pseudomonas putida GB-1]
Length = 207
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + QA+A + + + V GG+T N LV GADLL V F +R
Sbjct: 143 VDLLEQARAQVK---LPIAVIGGITLDNAAPLVAHGADLLAVIHGLFGADSAQEVTRRAR 199
Query: 215 DL 216
Sbjct: 200 AF 201
>gi|294101308|ref|YP_003553166.1| Quinolinate phosphoribosyl transferase [Aminobacterium colombiense
DSM 12261]
gi|293616288|gb|ADE56442.1| Quinolinate phosphoribosyl transferase [Aminobacterium colombiense
DSM 12261]
Length = 347
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 154 TIPKIRQAK---ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
T +R+ + + G + + GG+ I+ L +AG D VGS
Sbjct: 259 TAELVREVRYRLDIAGFSHVKIIASGGLNPERIRVLSEAGVDSFGVGSYI 308
>gi|212702214|ref|ZP_03310342.1| hypothetical protein DESPIG_00225 [Desulfovibrio piger ATCC 29098]
gi|212674340|gb|EEB34823.1| hypothetical protein DESPIG_00225 [Desulfovibrio piger ATCC 29098]
Length = 230
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
VQAGAD LVVG A+ + K+A
Sbjct: 191 TPARAVQAGADFLVVGRPILKAPSPAEAARAIQAEMKAA 229
>gi|150401623|ref|YP_001325389.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanococcus aeolicus Nankai-3]
gi|167011537|sp|A6UWA5|HIS4_META3 RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|150014326|gb|ABR56777.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanococcus aeolicus Nankai-3]
Length = 241
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 158 IRQAKALIGKRSISLEVDGGVTS-RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I K L+ + +I + GG+T+ ++ L + G D +VVGS+ + K + DL
Sbjct: 181 IEPVKKLVDELNIPIIASGGITTYDDLLKLKEIGVDGVVVGSAIY---------KEMMDL 231
Query: 217 KKS 219
KK+
Sbjct: 232 KKA 234
>gi|26991463|ref|NP_746888.1| thiamine-phosphate pyrophosphorylase [Pseudomonas putida KT2440]
gi|47606160|sp|Q88DP1|THIE_PSEPK RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|24986540|gb|AAN70352.1|AE016677_3 thiamine-phosphate pyrophosphorylase [Pseudomonas putida KT2440]
Length = 207
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ QA+A + + + V GG+T N LV GADLL V F +R
Sbjct: 146 LEQARAQVK---LPIAVIGGITLDNAAPLVAHGADLLAVIHGLFGADSAQEVTRRARAF 201
>gi|148549861|ref|YP_001269963.1| thiamine-phosphate pyrophosphorylase [Pseudomonas putida F1]
gi|166228782|sp|A5W9G9|THIE_PSEP1 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|148513919|gb|ABQ80779.1| thiamine-phosphate pyrophosphorylase [Pseudomonas putida F1]
Length = 207
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ QA+A + + + V GG+T N LV GADLL V F +R
Sbjct: 146 LEQARAQVK---LPIAVIGGITLDNAAPLVAHGADLLAVIHGLFGADSAQEVTRRARAF 201
>gi|148558915|ref|YP_001258240.1| thiamine-phosphate pyrophosphorylase [Brucella ovis ATCC 25840]
gi|148370172|gb|ABQ60151.1| putative thiamine-phosphate pyrophosphorylase [Brucella ovis ATCC
25840]
Length = 203
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 21/183 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G + + V D + IR+ R + DC L+++
Sbjct: 13 SADW------LERMVPLGIRLVQLRVKDKADAQLRA----EIRAARDICAAH-DCQLIVN 61
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + D GCD I E L I A G K GV+ + E + V
Sbjct: 62 D---YWKLALDEGCDFIQLGQEDLDGAD--LDAIRAGGLKLGVSSHDEAELDRALSVRP- 115
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + + P + + E +P++ + KA IG +I L GG++ + AGA
Sbjct: 116 -DYIALGPIYPTILKKMKWHEQGLPRLGEWKARIG--NIPLVGIGGLSVERAPGVFAAGA 172
Query: 192 DLL 194
D++
Sbjct: 173 DIV 175
>gi|18312803|ref|NP_559470.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase, conjectural
[Pyrobaculum aerophilum str. IM2]
gi|18160288|gb|AAL63652.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase, conjectural
[Pyrobaculum aerophilum str. IM2]
Length = 216
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA--DLLV 195
+ V+ G Q + + I + + V GG+T R ++ +++ GA D++V
Sbjct: 132 LFIVHLGVDVQTRTGMRFEDLLEIALKIKNMGVGVAVAGGITERELELIIKRGAQVDVVV 191
Query: 196 VGSSFFNQKGEISYAKRLNDLKK 218
VG S N S +N++ K
Sbjct: 192 VGRSIVNDTSPASKFVMMNNILK 214
>gi|62289186|ref|YP_220979.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 1 str.
9-941]
gi|82699123|ref|YP_413697.1| thiamine-phosphate pyrophosphorylase [Brucella melitensis biovar
Abortus 2308]
gi|189023457|ref|YP_001934225.1| thiamine-phosphate pyrophosphorylase [Brucella abortus S19]
gi|237814676|ref|ZP_04593674.1| Thiamine-phosphate pyrophosphorylase [Brucella abortus str. 2308 A]
gi|254696634|ref|ZP_05158462.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 2 str.
86/8/59]
gi|254707103|ref|ZP_05168931.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis
M163/99/10]
gi|254731542|ref|ZP_05190120.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 4 str.
292]
gi|260546481|ref|ZP_05822221.1| thiamine monophosphate synthase [Brucella abortus NCTC 8038]
gi|260759292|ref|ZP_05871640.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 4 str.
292]
gi|260761014|ref|ZP_05873357.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 2 str.
86/8/59]
gi|261314576|ref|ZP_05953773.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis
M163/99/10]
gi|62195318|gb|AAX73618.1| thiamine-phosphate pyrophosphorylase, hypothetical [Brucella
abortus bv. 1 str. 9-941]
gi|82615224|emb|CAJ10171.1| Thiamine monophosphate synthase [Brucella melitensis biovar Abortus
2308]
gi|189019029|gb|ACD71751.1| Thiamine monophosphate synthase [Brucella abortus S19]
gi|237789513|gb|EEP63723.1| Thiamine-phosphate pyrophosphorylase [Brucella abortus str. 2308 A]
gi|260096588|gb|EEW80464.1| thiamine monophosphate synthase [Brucella abortus NCTC 8038]
gi|260669610|gb|EEX56550.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 4 str.
292]
gi|260671446|gb|EEX58267.1| thiamine-phosphate pyrophosphorylase [Brucella abortus bv. 2 str.
86/8/59]
gi|261303602|gb|EEY07099.1| thiamine-phosphate pyrophosphorylase [Brucella pinnipedialis
M163/99/10]
Length = 203
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G + + V D + IR+ R + DC L+++
Sbjct: 13 SADW------LERMVPLGIRLVQLRVKDKADAQLRA----EIRAARDICAAH-DCQLIVN 61
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + D GCD I E L I A G K GV+ + E + V
Sbjct: 62 D---YWKLALDEGCDFIHLGQEDLDGAD--LDAIRAGGLKLGVSSHDEAELDRALSVRP- 115
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + P + + E +P++ + KA IG +I L GG++ + AGA
Sbjct: 116 -DYIAFGPIYPTILKKMKWHEQGLPRLGEWKARIG--NIPLVGIGGLSVERAPGVFAAGA 172
Query: 192 DLL 194
D++
Sbjct: 173 DIV 175
>gi|296114568|ref|ZP_06833221.1| thiamine-phosphate pyrophosphorylase [Gluconacetobacter hansenii
ATCC 23769]
gi|295978924|gb|EFG85649.1| thiamine-phosphate pyrophosphorylase [Gluconacetobacter hansenii
ATCC 23769]
Length = 213
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY-AKRLN-DLKKSALAID 224
+ + GG+T N LV AGAD L V S+ ++ + +N + +++ AID
Sbjct: 157 LPVVAIGGITPENCGPLVHAGADFLAVISAVWSHPDGPDAGVRAMNAAMDRASDAID 213
>gi|251795217|ref|YP_003009948.1| 3-hexulose-6-phosphate synthase [Paenibacillus sp. JDR-2]
gi|247542843|gb|ACS99861.1| 3-hexulose-6-phosphate synthase [Paenibacillus sp. JDR-2]
Length = 209
Score = 37.5 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 78 INIIADAGCDIITF-HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
+ ++AG DIIT I+ ++ KK V + +A ID + +
Sbjct: 70 VMKASEAGADIITVLGVSDDSTIKGAVDEARKQNKKIMVDMINVKDIAARAAEIDNLG-V 128
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
+ V+ G+ Q +++ + K ++ + ++ GG+ + + +++A DL++V
Sbjct: 129 DYICVHSGYDHQADGKNSFEDLATIKRVVKQAKTAIA--GGIKLQTLPEVIRAQPDLVIV 186
Query: 197 GSSFFNQKGEISYAKRLNDLKK 218
G + + + A ++ L K
Sbjct: 187 GGGITGAEDKQAVAAQMQQLIK 208
>gi|308173131|ref|YP_003919836.1| inhibitor of thiaminase TenA [Bacillus amyloliquefaciens DSM 7]
gi|307605995|emb|CBI42366.1| inhibitor of thiaminase TenA [Bacillus amyloliquefaciens DSM 7]
Length = 230
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL-NDL 216
I + SI + GGVT + I QA D + V S F+ + AKR +
Sbjct: 162 ISLLSDIKSTLSIPVIAIGGVTLQTIGKAKQAKPDGIAVMSGIFSAENPEEAAKRYARAI 221
Query: 217 KKS 219
+++
Sbjct: 222 REA 224
>gi|227537159|ref|ZP_03967208.1| thiamine-phosphate diphosphorylase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227243090|gb|EEI93105.1| thiamine-phosphate diphosphorylase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 212
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ I+Q + K I++ G + +NI S++QAGAD + V S+ A L
Sbjct: 150 LEGIQQIRQRSDKPLIAI---GHMNLQNIASVLQAGADAIAVVSAICAASDPKQAAYELK 206
Query: 215 D 215
+
Sbjct: 207 N 207
>gi|313206960|ref|YP_004046137.1| inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
DSM 15868]
gi|312446276|gb|ADQ82631.1| inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
DSM 15868]
gi|315024036|gb|EFT37038.1| Inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
RA-YM]
gi|325335603|gb|ADZ11877.1| IMP dehydrogenase/GMP reductase [Riemerella anatipestifer RA-GD]
Length = 486
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGG--VTSRNIKSLVQAGADLLVVG 197
+ KI++ + + + GG VT+ K L++AGA++L VG
Sbjct: 259 VLDKIKEIRQAF--PDLDIV--GGNIVTAEAAKDLIEAGANVLKVG 300
>gi|169831232|ref|YP_001717214.1| inosine-5'-monophosphate dehydrogenase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638076|gb|ACA59582.1| inosine-5'-monophosphate dehydrogenase [Candidatus Desulforudis
audaxviator MP104C]
Length = 485
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRT---IHAMGKK-TGVAINPETPVAILEDVIDEI 133
++ + +A D I + H RR ++ I +A N T A + ++
Sbjct: 234 VDALVEAKVDAIVV-DTAHGHSRRVIQAVSVIKNKYPDLCVIAGNVATGEATRDLILAGA 292
Query: 134 DMILIMTVNPG--FGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTSR-NIKSLV 187
D + + + PG + + +P+I + + + DGGV +I +
Sbjct: 293 DAVKV-GIGPGSICTTRIIAGVGVPQITAVHNCANEAVKHGVPIIADGGVKYSGDIVKAI 351
Query: 188 QAGADLLVVGS 198
AGAD++++GS
Sbjct: 352 AAGADVVMIGS 362
>gi|167519811|ref|XP_001744245.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777331|gb|EDQ90948.1| predicted protein [Monosiga brevicollis MX1]
Length = 520
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 25/155 (16%)
Query: 26 ITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAG 85
+ G D+M G F + I + R D++ + H S ++ +A A
Sbjct: 319 VEHYGCDVKDVDIMMGTFTKSFGAAGGYIAADRVIIDALKN-H---SHSHTYAMAMAPAV 374
Query: 86 CDIITFHPES------SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM 139
+ + R ++ + + A + + D ++ ++
Sbjct: 375 AQQVLTSMKVIMGVTGGDDGHRRIQQLADNARYFRQACKK---LGFIIYGNDASPIVPLL 431
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
NPG KI + KR I + V
Sbjct: 432 IFNPG------------KISALSREMRKRGICIVV 454
>gi|70732733|ref|YP_262496.1| thiamine-phosphate pyrophosphorylase [Pseudomonas fluorescens Pf-5]
gi|123652718|sp|Q4K5I7|THIE_PSEF5 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|68347032|gb|AAY94638.1| thiamine-phosphate pyrophosphorylase [Pseudomonas fluorescens Pf-5]
Length = 207
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL--VVGSSFFNQKGEISYAK 211
++ + QA+A + + + V GG+T N LV GADLL V G F + +
Sbjct: 142 SLELLDQARASL---HLPICVIGGITLDNAAPLVNHGADLLAVVHG--LFGAESAEEVTR 196
Query: 212 RLNDL 216
R
Sbjct: 197 RARAF 201
>gi|317471301|ref|ZP_07930662.1| thiamine monophosphate synthase/TENI [Anaerostipes sp. 3_2_56FAA]
gi|316901221|gb|EFV23174.1| thiamine monophosphate synthase/TENI [Anaerostipes sp. 3_2_56FAA]
Length = 216
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 22/204 (10%)
Query: 19 LGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHI 78
L E++ + G + D + + ++ + R Y + +
Sbjct: 27 LMEQVKDALDGGITFLQLREKDLEYDAFLQEAIEMAKLSRKYGVPFVI--------NDEV 78
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
I G D H R+ R I K GV+++ L+ D D + +
Sbjct: 79 EIALKCGADG--VHVGQEDMACRNARDILGPDKIIGVSVHNVK--EALKAQADGADYLGL 134
Query: 139 MTV--NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
V P +++E + K + +I + GG+ N+ L + D + V
Sbjct: 135 GAVKATPTKTDARVVEF-----EEIKKVCDAVNIPVVAIGGIKKDNMMELKGSHVDGIAV 189
Query: 197 GSSFFNQKGEISYAKRLNDLKKSA 220
S+ F + K +L+K A
Sbjct: 190 VSAIFGAEN---IRKETEELRKKA 210
>gi|289522197|ref|ZP_06439051.1| thiamine-phosphate diphosphorylase [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289504033|gb|EFD25197.1| thiamine-phosphate diphosphorylase [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 210
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRLNDL 216
I K + + GG+ N+K +QAGA + V+ S+ +QK A+ L L
Sbjct: 150 IEGLKEVCVNTKLPCVAIGGIGVHNVKQALQAGAVGVAVI-SAVISQKDIAGAARTLRSL 208
>gi|323703452|ref|ZP_08115099.1| thiamine-phosphate pyrophosphorylase [Desulfotomaculum nigrificans
DSM 574]
gi|323531542|gb|EGB21434.1| thiamine-phosphate pyrophosphorylase [Desulfotomaculum nigrificans
DSM 574]
Length = 216
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG----SSFFNQKGEISYAKRLN 214
K + + +I + GG+ + N +++AGA G ++ + A++L
Sbjct: 152 VKQVCTRATIPVVGIGGIKANNAAQVIEAGA----AGVSVITAVVSADDVTEAARQLR 205
>gi|294793036|ref|ZP_06758182.1| hydroxyethylthiazole kinase [Veillonella sp. 6_1_27]
gi|294455981|gb|EFG24345.1| hydroxyethylthiazole kinase [Veillonella sp. 6_1_27]
Length = 505
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+I + +A ++ GG+T N ++QAGA + V S+ + A+
Sbjct: 438 PCGPDRITELRA--EGLTLPCVGIGGITLDNATPVLQAGASGVAVISAIAHADNPYEAAE 495
Query: 212 RLNDL 216
+L
Sbjct: 496 EFKNL 500
>gi|255634482|gb|ACU17605.1| unknown [Glycine max]
Length = 267
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 8/123 (6%)
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
G + + P TP ++ ++D + + + + G G S ++ I
Sbjct: 145 KKHGIELVLLTTPTTPPDRMKAIVDVAEGFVYLVSSVGVTGA--RASVSGSVQSLLQEIK 202
Query: 167 KRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFN----QKGEISYAKRLNDLKKSA 220
+ + G G++ ++K + G D ++VGS+ K K L L +S
Sbjct: 203 EATTKPVAVGFGISKPEHVKQVAGWGVDGVIVGSAIVKVLGEAKSPQEGLKELEVLTRSL 262
Query: 221 LAI 223
A
Sbjct: 263 KAA 265
>gi|317124531|ref|YP_004098643.1| thiamine monophosphate synthase [Intrasporangium calvum DSM 43043]
gi|315588619|gb|ADU47916.1| thiamine monophosphate synthase [Intrasporangium calvum DSM 43043]
Length = 248
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 176 GGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
GGV + N + AGAD + V+G + + + + D ++A A
Sbjct: 199 GGVDAANAGHWIAAGADGVAVMG-AVMRAADPTAAMRAVVDSVRAARA 245
>gi|126651355|ref|ZP_01723562.1| thiamine phosphate synthase chain B [Bacillus sp. B14905]
gi|126591884|gb|EAZ85967.1| thiamine phosphate synthase chain B [Bacillus sp. B14905]
Length = 213
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKK 218
+ ++ + GG+ N ++QAGAD + V S+ + K +S K L+ +KK
Sbjct: 159 QPNLPIVAIGGINWTNANIVLQAGADGVAVISAICDSKDIEQTVSMFKSLSRIKK 213
>gi|193216192|ref|YP_001997391.1| modD protein [Chloroherpeton thalassium ATCC 35110]
gi|193089669|gb|ACF14944.1| modD protein [Chloroherpeton thalassium ATCC 35110]
Length = 286
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 166 GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
S+ + GG+ N++ G D+LV +F + +I
Sbjct: 234 KYPSLQIAAAGGINGENVREYAATGVDILVTTWPYFGKPADIQAK 278
>gi|148265680|ref|YP_001232386.1| thiamine-phosphate pyrophosphorylase [Geobacter uraniireducens Rf4]
gi|146399180|gb|ABQ27813.1| thiamine-phosphate diphosphorylase [Geobacter uraniireducens Rf4]
Length = 220
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GG+ N+ ++ AGA + + S+ + + AK L L
Sbjct: 171 GGIKPYNVPEVIAAGAHGIALVSAILSADEPRTAAKTLISL 211
>gi|330954342|gb|EGH54602.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae Cit
7]
Length = 266
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 13/103 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I +++ H + P PV + + + E+ L + G L
Sbjct: 173 HIAACGGIAQAIEAAHRIA--------PGKPVEVEVESLSELRQAL----DAGADIIMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
E ++ +R+A L R+ SLE GG+ ++ + + G D
Sbjct: 221 ELSLDDMREAVRLTAGRA-SLEASGGINDDTLRVIAETGVDYF 262
>gi|330818065|ref|YP_004361770.1| Nicotinate-nucleotide pyrophosphorylase [Burkholderia gladioli
BSR3]
gi|327370458|gb|AEA61814.1| Nicotinate-nucleotide pyrophosphorylase [Burkholderia gladioli
BSR3]
Length = 293
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+ PV + + + ++D L G L + +R+A + G R++ L
Sbjct: 197 AAFALEAGVPVQVEVETLAQLDTALAH----GAKSVLLDNFSFEMMREAVRVTGGRAV-L 251
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV + ++ + G D
Sbjct: 252 EVSGGVNAETVRDIASTGVD 271
>gi|163796357|ref|ZP_02190318.1| Thiamine-phosphate diphosphorylase [alpha proteobacterium BAL199]
gi|159178499|gb|EDP63041.1| Thiamine-phosphate diphosphorylase [alpha proteobacterium BAL199]
Length = 230
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQK-GEISYAKRLNDLKKSALAI 223
I GG+T N LV+AGAD L VVG + +N G + K ++A+A
Sbjct: 172 IPCVAIGGITPDNCGPLVEAGADFLAVVG-AVWNHPQGPGAAVKAF----EAAIAA 222
>gi|89901248|ref|YP_523719.1| thiamine-phosphate pyrophosphorylase [Rhodoferax ferrireducens
T118]
gi|122478987|sp|Q21VL5|THIE_RHOFD RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|89345985|gb|ABD70188.1| thiamine-phosphate pyrophosphorylase [Rhodoferax ferrireducens
T118]
Length = 219
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + ++ L GG+ N + ++ AGAD L V S+ + A RL L
Sbjct: 160 LRQVRRATTVPLVAIGGIHVGNAREVLLAGADGLAVVSALCAAQDPCVAALRLRQL 215
>gi|313887913|ref|ZP_07821592.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846079|gb|EFR33461.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 481
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 19/150 (12%)
Query: 70 MISSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
+ I + A D++ T H S ++ +++ I +
Sbjct: 224 ATKDVLDRIEALVKAKADVVVIDTAHG-QSKNVLNTIKKIKDAYPDLQLIAGNVATYEGT 282
Query: 127 EDVIDEIDMILIMTVNPG---------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
ED+I + + + PG G I + + R AK K I + DGG
Sbjct: 283 EDLIKAGADCVKIGIGPGSICTTRVVTGIGVPQITAIMEAYRAAK----KYGIPIIADGG 338
Query: 178 VTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
+ ++ + AG +++++GS F E
Sbjct: 339 IKFSGDVAKALAAGGNVVMMGS-LFAGTDE 367
>gi|163789516|ref|ZP_02183955.1| N-acetylmannosamine-6-phosphate 2-epimerase [Carnobacterium sp.
AT7]
gi|159875370|gb|EDP69435.1| N-acetylmannosamine-6-phosphate 2-epimerase [Carnobacterium sp.
AT7]
Length = 230
Score = 37.5 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 76 SHINIIADAGCDIITFHPE-----SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
I+ +A + CD+I + + ++ I + + + T ++E
Sbjct: 83 KEIDELAKSKCDMIALDATDRIRPNGETLESFVQAIRSKYPSILLMADASTVEEVIEAEK 142
Query: 131 DEIDMI--LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLV 187
D + +M GQ + ++ + K ++ ++ + V+G + T K
Sbjct: 143 IGFDCVSTTLMGYTKKSEGQNIADNDFE---RLKIILETVNVPVIVEGHIDTPEKAKRCK 199
Query: 188 QAGADLLVVGSSF 200
+ G +VVGS+
Sbjct: 200 ELGVHSIVVGSAI 212
>gi|171322005|ref|ZP_02910886.1| KDPG and KHG aldolase [Burkholderia ambifaria MEX-5]
gi|171092697|gb|EDT37986.1| KDPG and KHG aldolase [Burkholderia ambifaria MEX-5]
Length = 225
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 20/158 (12%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR ++ + DAG +I I ++
Sbjct: 66 IAALRRALPDDMIVGAGTVLRAEFVDRVQDAGGTLIVM-------PHSDAAVIR-RARER 117
Query: 114 GVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+A P TP + + D +L M + +P ++ +A+I +
Sbjct: 118 GLASAPGVATPTEAFAALANGAD-VLKMF--------PAEQLGVPVVKAWRAVIDRAVPL 168
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ V GG+ N++ + AGA+ +GS+ +
Sbjct: 169 IPV-GGIAPDNMQPFLAAGANGFGLGSALYRPGQSADA 205
>gi|153814575|ref|ZP_01967243.1| hypothetical protein RUMTOR_00789 [Ruminococcus torques ATCC 27756]
gi|317501264|ref|ZP_07959468.1| 1-(5-phosphoribosyl)-5 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089989|ref|ZP_08338879.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848069|gb|EDK24987.1| hypothetical protein RUMTOR_00789 [Ruminococcus torques ATCC 27756]
gi|316897331|gb|EFV19398.1| 1-(5-phosphoribosyl)-5 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330402903|gb|EGG82469.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 257
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+QAK + L++ GG+T N ++ GA ++V S F + L L
Sbjct: 72 QQAKEALRVYPKGLQIGGGITDENAYEYIECGASHVIVTSYVFRGGEFCR--ENLKKL 127
>gi|115524083|ref|YP_780994.1| thiamine-phosphate pyrophosphorylase [Rhodopseudomonas palustris
BisA53]
gi|115518030|gb|ABJ06014.1| Thiamine-phosphate diphosphorylase [Rhodopseudomonas palustris
BisA53]
Length = 202
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 5/128 (3%)
Query: 90 TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQ 148
H + I G G++ + + + + + D I + + P
Sbjct: 74 HLHLGQEDLAEADVHEIRKAGLTLGLSTHDDAELEA--ALSAQPDYIALGPIFPTTLKSM 131
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
+ +PKI K +G SI L GG+ + AGAD + V S +
Sbjct: 132 RFAPQGVPKITTWKQRVG--SIPLVAIGGIKLEQAAEIFAAGADSIAVVSDVTQNPDPDA 189
Query: 209 YAKRLNDL 216
+ D
Sbjct: 190 RVRAWLDF 197
>gi|326429970|gb|EGD75540.1| 5-proFAR isomerase His6 [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
L+V GG+T N + +QAGAD L+V S F
Sbjct: 78 LQVGGGITIDNAEQWLQAGADKLIVTSWLF 107
>gi|311070340|ref|YP_003975263.1| thiamine-phosphate pyrophosphorylase [Bacillus atrophaeus 1942]
gi|310870857|gb|ADP34332.1| thiamine-phosphate pyrophosphorylase [Bacillus atrophaeus 1942]
Length = 222
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
SI + GG+T N +++AGAD + + S+ + A+
Sbjct: 167 SIPIVGIGGITLENAAPVIEAGADGVSMISAISMAQDPEESAQ 209
>gi|302391850|ref|YP_003827670.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Acetohalobium arabaticum DSM 5501]
gi|302203927|gb|ADL12605.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Acetohalobium arabaticum DSM 5501]
Length = 289
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGS 198
GG+T+ IK + QAG D++ +G+
Sbjct: 243 GGITAETIKEVAQAGVDIISLGT 265
>gi|212224032|ref|YP_002307268.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Thermococcus
onnurineus NA1]
gi|226700369|sp|B6YWA8|HIS4_THEON RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|212008989|gb|ACJ16371.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]
imidazole-4-carboxamide isomerase [Thermococcus
onnurineus NA1]
Length = 229
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
PV I + +D I ++ ++ F G+ K +I + + ++V GG
Sbjct: 28 YGDPVEIASRFTELVDKIHVVDLDGAFTGKPQNLDV------VKEIIEETGLKVQV-GGG 80
Query: 179 --TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ +I + GA+ +++G+ F ++ + +++ D
Sbjct: 81 FRSYESIAKAYEIGAENVIIGTKAF----DLEFLEKITD 115
>gi|226290629|gb|EEH46113.1| 5-proFAR isomerase [Paracoccidioides brasiliensis Pb18]
Length = 258
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
A+ + L+V GG+T +N + + AGA+ +++ S F
Sbjct: 66 EAARESLAAWPGGLQVAGGITDKNAQHWIAAGAEKVIITSYLF 108
>gi|225678321|gb|EEH16605.1| 5-proFAR isomerase [Paracoccidioides brasiliensis Pb03]
Length = 262
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
A+ + L+V GG+T +N + + AGA+ +++ S F
Sbjct: 66 EAARESLAAWPGGLQVAGGITDKNAQHWIAAGAEKVIITSYLF 108
>gi|223044450|ref|ZP_03614482.1| 3-hexulose-6-phosphate synthase [Staphylococcus capitis SK14]
gi|222442179|gb|EEE48292.1| 3-hexulose-6-phosphate synthase [Staphylococcus capitis SK14]
Length = 211
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+ V+ G+ Q S + +R K++I + + V GG+ IKS+V DL++VG
Sbjct: 131 IAVHTGYDLQAKGVSPLESLRTVKSVIS--NSKVAVAGGIKPDTIKSVVVEQPDLIIVGG 188
Query: 199 SFFNQKGEISYAKRLNDL 216
N + AK+ D+
Sbjct: 189 GIANADDPKAAAKQCRDI 206
>gi|119485479|ref|ZP_01619807.1| hypothetical protein L8106_10066 [Lyngbya sp. PCC 8106]
gi|119457235|gb|EAW38361.1| hypothetical protein L8106_10066 [Lyngbya sp. PCC 8106]
Length = 249
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 85/248 (34%), Gaps = 45/248 (18%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
+ +++++ ++ D R+ + T+ GA + +I+ ++R R+ +
Sbjct: 14 SKALKVISGLMNFDTQRVAATVKAATQGGATFV-----------DIAADVSLVRMARNLT 62
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITF-----------HPESSPHIRRSLRTIHAMG 110
+ +AG D+I E+ + R ++
Sbjct: 63 HLPICV--SAVEPVKFVP-CVEAGADLIEIGNFDAFYAQGLRFEA-EDVLRLTEQTRSLL 118
Query: 111 KKTGVAINPETPVAILEDVIDEIDMIL--------IMTVNPGFGGQQLIESTIPKIRQAK 162
+ ++ P + ++ ++ + L I+ G Q + T+ I +A
Sbjct: 119 --PNITLSVTVP--HILELDKQVQLALELVEAGADIIQTEGGTSSQPVHSGTLGLIEKAS 174
Query: 163 -ALIGKRSISLEV------DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
L IS V G+++ + AGA + VGS+ E++ +
Sbjct: 175 PTLAAAYEISRAVSVPVLCASGLSNVTAPLAIAAGASGIGVGSAINRLNDEVAMVAAVRS 234
Query: 216 LKKSALAI 223
L ++ +
Sbjct: 235 LVEALATV 242
>gi|110668561|ref|YP_658372.1| thiamine-phosphate pyrophosphorylase [Haloquadratum walsbyi DSM
16790]
gi|121687215|sp|Q18GX9|THIE_HALWD RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|109626308|emb|CAJ52766.1| thiamine-phosphate pyrophosphorylase [Haloquadratum walsbyi DSM
16790]
Length = 223
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 175 DGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLN 214
GG+T N +++AGAD + VV S+ + ++L
Sbjct: 165 IGGITPSNTTEVIRAGADGVAVV-SAITTADDPAAATRKLQ 204
>gi|289550844|ref|YP_003471748.1| 3-keto-L-gulonate 6-phosphate decarboxylase [Staphylococcus
lugdunensis HKU09-01]
gi|315658342|ref|ZP_07911214.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Staphylococcus
lugdunensis M23590]
gi|289180376|gb|ADC87621.1| 3-keto-L-gulonate 6-phosphate decarboxylase [Staphylococcus
lugdunensis HKU09-01]
gi|315496671|gb|EFU84994.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Staphylococcus
lugdunensis M23590]
Length = 221
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL--LVVGSSFFNQ 203
G+ E + K+++ + + V GG++ +K G D+ + G S
Sbjct: 149 DGESWGEKDLSKVKKLIDM----GFRVSVTGGLSVETLKLFK--GIDVYTFIAGRSLTEA 202
Query: 204 KGEISYAKRLND 215
+ +S A+ D
Sbjct: 203 EDPLSAAREFKD 214
>gi|154252551|ref|YP_001413375.1| thiamine-phosphate pyrophosphorylase [Parvibaculum lavamentivorans
DS-1]
gi|154156501|gb|ABS63718.1| thiamine-phosphate pyrophosphorylase [Parvibaculum lavamentivorans
DS-1]
Length = 223
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKG-EISYAKRLNDLKKSALAI 223
GG+T N LV+AGAD L V S + + + ++LN + A
Sbjct: 173 IGGITVANAAPLVRAGADFLAVSSGVWAHEDGPAAAVRKLNVIMAEESAA 222
>gi|73667615|ref|YP_303630.1| orotidine 5'-phosphate decarboxylase [Methanosarcina barkeri str.
Fusaro]
gi|109892905|sp|Q46GE2|PYRF_METBF RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
gi|72394777|gb|AAZ69050.1| orotidine-5'-phosphate decarboxylase [Methanosarcina barkeri str.
Fusaro]
Length = 221
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 15/212 (7%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA D S E + D + + ++ G +IR L ++ + D +
Sbjct: 8 ILALDVSDREEALKIAEDV---SEFVDAIKVGYPLILATGLGIIRELAEFAPIIADFKVA 64
Query: 71 -ISSIDSHI-NIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETP--VAI 125
I + + I + +AG D + + + + GK V P
Sbjct: 65 DIPNTNRLICEHVFEAGTDAVIVQGFTGRDSLDACIEIASEYGKDVFVVSEMSHPGGAEF 124
Query: 126 LEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR--NI 183
L+ V + I M G G + ++ + +IG + + GV ++
Sbjct: 125 LQPVGEAIAR---MAAEAGAFGLVAPATRPERVTTIRKIIGNKLTIISP--GVGAQGGKA 179
Query: 184 KSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ AGAD ++VG + + + A+++
Sbjct: 180 SDVIAAGADWVIVGRAIYKAESPREAARKIAA 211
>gi|163782942|ref|ZP_02177937.1| orotidine-5'-phosphate decarboxylase [Hydrogenivirga sp.
128-5-R1-1]
gi|159881622|gb|EDP75131.1| orotidine-5'-phosphate decarboxylase [Hydrogenivirga sp.
128-5-R1-1]
Length = 222
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 54/171 (31%), Gaps = 23/171 (13%)
Query: 58 RSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI 117
+ D L + G D +T H + R + K GV +
Sbjct: 58 MKFHDIPNTVRLAVEEASR-------LGVDYLTLHTLGGAEMLREAVSSKGKVKLIGVTL 110
Query: 118 NPETPVAILEDVIDEI----DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
+ L+ + +++L + G +E + + + + + +
Sbjct: 111 LTSHDESYLKFLHTRFVSVEELVLYLARTGKEAG---LEGVVCSAGEVRRIKEETGLFTV 167
Query: 174 VDG---GVTSR------NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V G + + V+ GAD++V+G + + +++ +
Sbjct: 168 VPGIRLSGNAEDQRRVFTPEEAVREGADMIVMGRDIYRSDDPVGVVEKVLE 218
>gi|302671807|ref|YP_003831767.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase HisA [Butyrivibrio proteoclasticus B316]
gi|302396280|gb|ADL35185.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase HisA [Butyrivibrio proteoclasticus B316]
Length = 258
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
RQA A + L++ GG+T+ N + + GA ++V S F G+I+Y L L K
Sbjct: 72 RQAIAALTATPGLLQIGGGITADNAQEFLDYGASHVIVTSYVFK-NGKINYT-NLKKLVK 129
Query: 219 S 219
+
Sbjct: 130 A 130
>gi|332185881|ref|ZP_08387628.1| thiamine-phosphate pyrophosphorylase [Sphingomonas sp. S17]
gi|332014239|gb|EGI56297.1| thiamine-phosphate pyrophosphorylase [Sphingomonas sp. S17]
Length = 228
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GG+T N LV+AGAD L + +N E + K ++ K
Sbjct: 185 IGGITPANAAPLVKAGADFLAASGAVWNG-DEAAAVKAFAEVLK 227
>gi|315608998|ref|ZP_07883970.1| thiamine-phosphate diphosphorylase [Prevotella buccae ATCC 33574]
gi|315249378|gb|EFU29395.1| thiamine-phosphate diphosphorylase [Prevotella buccae ATCC 33574]
Length = 214
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRL 213
A+ + L GG+T +I +L+ AG D + V G + + +R+
Sbjct: 149 ARMRASGMHVPLVAIGGITLADIPALMAAGVDGIAVSG-AVLGAEHPAEEMRRM 201
>gi|242032685|ref|XP_002463737.1| hypothetical protein SORBIDRAFT_01g005140 [Sorghum bicolor]
gi|241917591|gb|EER90735.1| hypothetical protein SORBIDRAFT_01g005140 [Sorghum bicolor]
Length = 340
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 115 VAINPETPVAILEDVIDEI-DMILIMTVNPGFGGQQLIESTIPK-IRQAKALIGKR---S 169
+ P TP ++++ + + +++VN G + + + + I++ K + K
Sbjct: 226 LLTTPATPEERMKEITEASEGFVYLVSVNGVTGSRADVNTRVESLIQEVKQVTDKPVAVG 285
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI-SYAKRLNDLKKSALAI 223
+ ++K + + GAD +++GS+ Q GE S + L LK+ A ++
Sbjct: 286 FGIS-----KPEHVKQIAEWGADGVIIGSAMVKQLGEATSPKEGLKRLKEYARSM 335
>gi|156978040|ref|YP_001448946.1| thiamine-phosphate pyrophosphorylase [Vibrio harveyi ATCC BAA-1116]
gi|166228943|sp|A7N7S3|THIE_VIBHB RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|156529634|gb|ABU74719.1| hypothetical protein VIBHAR_06844 [Vibrio harveyi ATCC BAA-1116]
Length = 204
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 64/208 (30%), Gaps = 22/208 (10%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + L + + G + G V A ++ + +D + +
Sbjct: 15 DLATLKRVVRKAVEGGVTMVQVREKHG-DVRAFIERAQAVKDILKDTDVPLIINDRVD-- 71
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV-IDEI 133
D H S R + K G++I E + + + ID I
Sbjct: 72 -------VALAVDADGVHLGQSDMPATIARELIGPNKILGLSIENEEQLTEADSLPIDYI 124
Query: 134 DMILIMTVNPGFGGQQLIESTIPK---IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+ I ++ K I K + S+ + GG+ NI L G
Sbjct: 125 GLSAIFATP--------TKTNTKKHWGIDGLKMALETTSLPIVAIGGINESNIPQLSATG 176
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L + S+ + + + ++ L L +
Sbjct: 177 VHGLALVSAICHAEDPKAASEYLLGLMR 204
>gi|89095112|ref|ZP_01168038.1| Thiamine-phosphate diphosphorylase [Oceanospirillum sp. MED92]
gi|89080607|gb|EAR59853.1| Thiamine-phosphate diphosphorylase [Oceanospirillum sp. MED92]
Length = 211
Score = 37.5 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 26/53 (49%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++ + GG++ N ++ AGAD++ V + + Q + A++ +
Sbjct: 153 QAKHEVNLPIVAIGGISVDNAAQIIDAGADMVAVIHALYAQNNIKATAQQFHQ 205
>gi|294498304|ref|YP_003562004.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium QM B1551]
gi|294348241|gb|ADE68570.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium QM B1551]
Length = 213
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+D I + T G+ Q E+ +++ K ++ ++ V GG+ + +VQ+ D
Sbjct: 128 VDYICVHT---GYDLQAEGETPFEQLQTIKRVV--KNAKTAVAGGIKLNTLPEVVQSQPD 182
Query: 193 LLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L++VG ++K + + A+ + + K A
Sbjct: 183 LVIVGGGITSEKDKRNVAEEMKKVVKQA 210
>gi|161353817|ref|YP_001009021.2| tryptophan synthase subunit alpha [Prochlorococcus marinus str.
AS9601]
Length = 275
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 60/164 (36%), Gaps = 15/164 (9%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
L+ + + +DAG + + + + + + P TP ++
Sbjct: 112 PLLCFGFERFCEMASDAGVSGLIVPDLPLEEAYKFSKIVSHHSMDLILLVAPTTPFERMK 171
Query: 128 DVIDEIDMILIMTVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDG-GV-TSRNI 183
+ + + G G+ ++ I + K + + V G G+ T ++
Sbjct: 172 QISNHTKGFTYLVSVTGVTGERNKMENRVENLIAKLKDVNSNP---IAV-GFGISTPEHV 227
Query: 184 KSLVQAGADLLVVGSSF------FNQKGEIS-YAKRLNDLKKSA 220
+ + GAD +++GS+F +K + + +++ +A
Sbjct: 228 NKVREWGADGVIIGSAFVKRISSLGEKDVVDHVGEFCKEMRLAA 271
>gi|21227045|ref|NP_632967.1| geranylgeranylglyceryl phosphate synthase-like protein
[Methanosarcina mazei Go1]
gi|31563181|sp|Q8PYC0|GGGPS_METMA RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|20905368|gb|AAM30639.1| geranylgeranylglyceryl diphosphate syntase [Methanosarcina mazei
Go1]
Length = 247
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
I K ++G+ L V GG+ + K AGAD++V G+ K +
Sbjct: 181 PVNPEMIGAVKQVLGEN--KLIVGGGIRNAETAKICTSAGADMIVTGTVVEEVKDVTAKV 238
Query: 211 KRL 213
+
Sbjct: 239 AEI 241
>gi|315426562|dbj|BAJ48192.1| geranylgeranylglyceryl phosphate synthase-like protein [Candidatus
Caldiarchaeum subterraneum]
Length = 251
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 167 KRSISLEVD--GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
K ++ + V GG+ T ++ +++ AGAD++V G++ +K A+ +N +K
Sbjct: 194 KHAVEIPVIVGGGIRTGKDAETVAAAGADIIVTGTAA--EKNREKLAEIINAVK 245
>gi|307256594|ref|ZP_07538375.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306865004|gb|EFM96906.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 295
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|242002178|ref|XP_002435732.1| hypothetical protein IscW_ISCW024322 [Ixodes scapularis]
gi|215499068|gb|EEC08562.1| hypothetical protein IscW_ISCW024322 [Ixodes scapularis]
Length = 104
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 150 LIESTIPK-IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+P + + K + LEV GG+T N+ AG D++
Sbjct: 34 FQPKDLPTAVHKLKTEF--PGVLLEVSGGITPENVTEFALAGVDVI 77
>gi|307245433|ref|ZP_07527521.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254387|ref|ZP_07536225.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258846|ref|ZP_07540578.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853774|gb|EFM85991.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862686|gb|EFM94642.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867197|gb|EFM99053.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 295
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|291525991|emb|CBK91578.1| thiamine-phosphate diphosphorylase [Eubacterium rectale DSM 17629]
Length = 216
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + I + GG+ + N +L G A + VVG + F AK L ++
Sbjct: 156 LREITAAVDIPVVAIGGINADNAVTLKGTGIAGIAVVG-AIFASADIKDAAKELAEI 211
>gi|94970313|ref|YP_592361.1| thiamine-phosphate pyrophosphorylase [Candidatus Koribacter
versatilis Ellin345]
gi|189030301|sp|Q1ILG3|THIE_ACIBL RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|94552363|gb|ABF42287.1| thiamine-phosphate diphosphorylase [Candidatus Koribacter
versatilis Ellin345]
Length = 211
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ ++R + L K +++ GG+T N +S++ AGAD
Sbjct: 152 LDRLRAVRKLTSKPLVAI---GGITRENCRSVIDAGAD 186
>gi|323135569|ref|ZP_08070652.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Methylocystis sp. ATCC 49242]
gi|322398660|gb|EFY01179.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Methylocystis sp. ATCC 49242]
Length = 454
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 7/134 (5%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ + DAGCD + E + + G + GV+ + + + + D
Sbjct: 64 DYWRLAIDAGCDFVHLGQEDLDTAD--IDALRRHGVRFGVSTHDDAELDRALSLAP--DY 119
Query: 136 ILIMTVNPGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + V P + + ++ K IG I L GG+TS + AGAD
Sbjct: 120 VALGPVWPTLLKTMKFAPQGLDRLGLWKRRIG--DIPLVAIGGLTSARACLALAAGADSA 177
Query: 195 VVGSSFFNQKGEIS 208
V + + S
Sbjct: 178 CVVTDVLRARDPES 191
>gi|307249780|ref|ZP_07531758.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858195|gb|EFM90273.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 295
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|125588250|gb|EAZ28914.1| hypothetical protein OsJ_12956 [Oryza sativa Japonica Group]
Length = 258
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 115 VAINPETPVAILEDV-IDEIDMILIMTVNPGFGG--QQLIEST---IPKIRQA--KALIG 166
+ P TP ++ + + +++VN G G Q + + +I+Q KA+
Sbjct: 144 LLTTPTTPPDRMKAITAASGGFVYLVSVN-GVTGSRQDVNPRVEHLLQEIKQVTDKAVCV 202
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKKSALAI 223
IS T +++ + + GAD +++GS+ Q GE + K+ L L+K A ++
Sbjct: 203 GYGIS-------TPDHVRQIAEWGADGVIIGSAMVRQLGEAASPKQGLKRLEKYARSL 253
>gi|220929408|ref|YP_002506317.1| thiamine-phosphate pyrophosphorylase [Clostridium cellulolyticum
H10]
gi|254784179|sp|B8I3J4|THIE_CLOCE RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|219999736|gb|ACL76337.1| thiamine-phosphate pyrophosphorylase [Clostridium cellulolyticum
H10]
Length = 210
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 7/127 (5%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGV-AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQ 149
H S +R I K GV A + E + + D I + + + + +
Sbjct: 85 VHVGQSDLPAAVVRKIIGNDKILGVSAGSVEKAIEAQKIGADYIGVGALFSTSTKTDAKA 144
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ T+ KI + + SI + GG+ + N L G + V S+ +QK S
Sbjct: 145 VSIETLMKIVR------EVSIPVVGIGGINAENAVQLKNTGIRGIAVVSAIISQKDIKSS 198
Query: 210 AKRLNDL 216
A++L ++
Sbjct: 199 AEKLLEI 205
>gi|256545422|ref|ZP_05472784.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Anaerococcus
vaginalis ATCC 51170]
gi|256398818|gb|EEU12433.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Anaerococcus
vaginalis ATCC 51170]
Length = 211
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
GQ + + KI++ + + V GG+ ++ + + G S +
Sbjct: 141 GQSWGDKDLDKIKKLVEM----GFKVSVTGGLDVYTLELFKGIDVNAFIAGRSIAEAENP 196
Query: 207 ----ISYAKRLNDL 216
I + ++N++
Sbjct: 197 KQAAIDFKNKINEI 210
>gi|190149885|ref|YP_001968410.1| pyridoxal biosynthesis lyase PdxS [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263209|ref|ZP_07544829.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|254781580|sp|B3GXB6|PDXS_ACTP7 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|189915016|gb|ACE61268.1| pyridoxal biosynthesis lyase PdxS [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306871426|gb|EFN03150.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 295
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|167746489|ref|ZP_02418616.1| hypothetical protein ANACAC_01199 [Anaerostipes caccae DSM 14662]
gi|167653449|gb|EDR97578.1| hypothetical protein ANACAC_01199 [Anaerostipes caccae DSM 14662]
Length = 206
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 22/204 (10%)
Query: 19 LGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHI 78
L E++ + G + D + + ++ + R Y + +
Sbjct: 17 LMEQVKDALDGGITFLQLREKDLEYDAFLQEAIEMAKLSRKYGVPFVI--------NDEV 68
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILI 138
I G D H R+ R I K GV+++ L+ D D + +
Sbjct: 69 EIALKCGADG--VHVGQEDMACRNARDILGPDKIIGVSVHNVK--EALKAQADGADYLGL 124
Query: 139 MTV--NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
V P +++E + K + +I + GG+ N+ L + D + V
Sbjct: 125 GAVKATPTKTDARVVEF-----EEIKKVCDAVNIPVVAIGGIKKDNMMELKGSHVDGIAV 179
Query: 197 GSSFFNQKGEISYAKRLNDLKKSA 220
S+ F + K +L+K A
Sbjct: 180 VSAIFGAEN---IRKETEELRKKA 200
>gi|186684187|ref|YP_001867383.1| glycine oxidase ThiO [Nostoc punctiforme PCC 73102]
gi|186466639|gb|ACC82440.1| glycine oxidase ThiO [Nostoc punctiforme PCC 73102]
Length = 674
Score = 37.5 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM-TVNPGFGGQQLIESTI 155
P +L+ + K+ + +L ++E+ +M +P GQ L +
Sbjct: 527 PDPIGTLQAAEQLVKEGFAVLPYINADPMLAKRLEEVGCATVMPLASPIGSGQGLKTTAN 586
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+I +I ++ + VD G+ + ++ GAD L++ S+ + A+ +N
Sbjct: 587 IQI-----IIENANVPVVVDAGIGSPSEAAQAMELGADALLINSAIALSPNPAAMARAMN 641
>gi|296242514|ref|YP_003650001.1| thiamine-phosphate diphosphorylase [Thermosphaera aggregans DSM
11486]
gi|296095098|gb|ADG91049.1| thiamine-phosphate diphosphorylase [Thermosphaera aggregans DSM
11486]
Length = 218
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 8/67 (11%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG----SSFFNQKGEISYAKRLNDL 216
+ ++ I + GGV N +++ G V G S+ RL +
Sbjct: 147 LRLIVNAVKIPVVAIGGVNESNALEVLETG----VAGIAVVSAVMGAPSAKEATSRLRSI 202
Query: 217 KKSALAI 223
ALA
Sbjct: 203 VDKALAA 209
>gi|215425634|ref|ZP_03423553.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
T92]
Length = 223
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG+ ++ + +++ AGA +VV + + + A++L +A
Sbjct: 177 IGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAA 222
>gi|123198273|gb|ABM69914.1| Tryptophan synthase, alpha subunit [Prochlorococcus marinus str.
AS9601]
Length = 261
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 60/164 (36%), Gaps = 15/164 (9%)
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
L+ + + +DAG + + + + + + P TP ++
Sbjct: 98 PLLCFGFERFCEMASDAGVSGLIVPDLPLEEAYKFSKIVSHHSMDLILLVAPTTPFERMK 157
Query: 128 DVIDEIDMILIMTVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDG-GV-TSRNI 183
+ + + G G+ ++ I + K + + V G G+ T ++
Sbjct: 158 QISNHTKGFTYLVSVTGVTGERNKMENRVENLIAKLKDVNSNP---IAV-GFGISTPEHV 213
Query: 184 KSLVQAGADLLVVGSSF------FNQKGEIS-YAKRLNDLKKSA 220
+ + GAD +++GS+F +K + + +++ +A
Sbjct: 214 NKVREWGADGVIIGSAFVKRISSLGEKDVVDHVGEFCKEMRLAA 257
>gi|16799420|ref|NP_469688.1| thiamine-phosphate pyrophosphorylase [Listeria innocua Clip11262]
gi|24212501|sp|Q92EW5|THIE_LISIN RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|16412772|emb|CAC95576.1| lin0343 [Listeria innocua Clip11262]
Length = 214
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ + S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSEDCQSVIKQLKN 209
>gi|295109330|emb|CBL23283.1| 3-hexulose-6-phosphate synthase [Ruminococcus obeum A2-162]
Length = 208
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
+ N E +A LE++ + + V+ G Q + + + ++ A
Sbjct: 104 KEIVVDMICVENMEERIAKLEEI-----GVHGLAVHTGTDQQAIGRTPLDDLKVMSA--A 156
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + V GG+ + +K ++ D+L+VG + + + AK +
Sbjct: 157 AKKAKISVAGGIHADTVKDYIEYHPDVLIVGGGICHVEDPAAAAKEI 203
>gi|187734884|ref|YP_001876996.1| thiamine-phosphate pyrophosphorylase [Akkermansia muciniphila ATCC
BAA-835]
gi|187424936|gb|ACD04215.1| thiamine-phosphate pyrophosphorylase [Akkermansia muciniphila ATCC
BAA-835]
Length = 214
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ + S+++AGA+ +V+ S + L
Sbjct: 169 IGGINGNTLPSVLEAGANRVVIVSWLLTHPDITGTVRTLRK 209
>gi|197119824|ref|YP_002140251.1| bifunctional 4-amino-5-hydroxymethyl-2-methylpyrimidine-phosphate
kinase/thiamin monophosphate synthase [Geobacter
bemidjiensis Bem]
gi|197089184|gb|ACH40455.1| 4-amino-5-hydroxymethyl-2-methylpyrimidine-phosphate kinase and
thiamin monophosphate synthase [Geobacter bemidjiensis
Bem]
Length = 484
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
L K I + GG+T N +++ AGAD + V S+ + +
Sbjct: 159 LKEKLRIPVVAIGGITRDNACAVIDAGADAIAVISAVLSARSP 201
>gi|45358702|ref|NP_988259.1| thiamine-phosphate pyrophosphorylase [Methanococcus maripaludis S2]
gi|47606068|sp|P61413|THIE_METMP RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|45047568|emb|CAF30695.1| Thiamine monophosphate synthase [Methanococcus maripaludis S2]
Length = 207
Score = 37.1 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDL 216
I K + ++ + GG+ N++++++ G + VV S+ + + A+ +N+L
Sbjct: 143 INGLKNISKIANLPIVAIGGINHSNVENVLKCGVSGVAVV-SAIVGAENILKSAENMNEL 201
Query: 217 KK 218
K
Sbjct: 202 IK 203
>gi|224079429|ref|XP_002305862.1| predicted protein [Populus trichocarpa]
gi|222848826|gb|EEE86373.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I +A G L+V GG+ N S ++ GA ++V S FN G++ +RL DL
Sbjct: 75 IEALRAYPGG----LQVGGGINVNNALSYIEEGASHVIVTSYVFN-NGQMD-LERLKDLV 128
Query: 218 K 218
+
Sbjct: 129 R 129
>gi|327401658|ref|YP_004342497.1| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)
imidazole-4-carboxamide isomerase [Archaeoglobus
veneficus SNP6]
gi|327317166|gb|AEA47782.1| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)
imidazole-4-carboxamide isomerase [Archaeoglobus
veneficus SNP6]
Length = 238
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 95 SSPHIRRSLRTIHAMGKKTGV-AINPETPVAILE--DVIDEIDMILIMTVNPGFGGQQLI 151
+S + R + I + K V ET +E + ++ D + ++ N G +
Sbjct: 118 ASKYPGRIMVAIDSRKDKVVVRGWKEETAFTPVELARLYEDCD-VSLLYTNVDVEG-LMR 175
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQK 204
+ I K+R+ + S+ + V GG+T ++++ + + GA +V+GS+ + K
Sbjct: 176 GAAIEKVREV---VEGTSLPVYVAGGITTRKDVEKIKKVGAAGVVIGSALYTGK 226
>gi|289641938|ref|ZP_06474093.1| Dihydroorotate oxidase [Frankia symbiont of Datisca glomerata]
gi|289508238|gb|EFD29182.1| Dihydroorotate oxidase [Frankia symbiont of Datisca glomerata]
Length = 313
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQ 188
+DE + +I G G L + ++RQ + L+ + + V GGV+ R+I ++
Sbjct: 222 LDEANRPVIDVELAGLAGAALRPVALGQVRQLRRLLPETVELIGV-GGVSRGRDIADFLR 280
Query: 189 AGADLLVVGSSFFNQKGEI 207
AGA + ++F+N+ G+
Sbjct: 281 AGATTVQAATAFWNRNGDA 299
>gi|218884502|ref|YP_002428884.1| geranylgeranylglyceryl phosphate synthase-like protein
[Desulfurococcus kamchatkensis 1221n]
gi|218766118|gb|ACL11517.1| geranylgeranylglyceryl phosphate synthase-like protein
[Desulfurococcus kamchatkensis 1221n]
Length = 248
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVV 196
++ + G G Q I P I + + V GG+ + L++AGAD++V
Sbjct: 171 LLYLEAGSGAQSHIPPAFPGIVK-----KHTELITMVGGGIRSPDAALELIRAGADIIVT 225
Query: 197 GSSFFNQKGEISYAKRLNDLKK 218
G+ +K + +KK
Sbjct: 226 GT--IMEKDPERGVNIIKTIKK 245
>gi|331270177|ref|YP_004396669.1| thiamine-phosphate diphosphorylase [Clostridium botulinum
BKT015925]
gi|329126727|gb|AEB76672.1| thiamine-phosphate diphosphorylase [Clostridium botulinum
BKT015925]
Length = 204
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 168 RSISL--EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++I++ GG+ N KS+++ G + + V S+ N+ A+ L ++
Sbjct: 154 KNINIPSVAIGGINKENAKSVLETGVNGISVISAILNKDNIKQAAEELLNI 204
>gi|294139039|ref|YP_003555017.1| patatin-like phospholipase family [Shewanella violacea DSS12]
gi|293325508|dbj|BAJ00239.1| Patatin-like phospholipase family [Shewanella violacea DSS12]
Length = 740
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 167 KRSISLEVDGGVTSRNIKSLVQA-GADLLVV---GSSFFNQKGEISYAKRLNDL 216
+ L +DGG+ + +V+A GAD+++ GS+ ++ S LN L
Sbjct: 199 EYEGKLLIDGGIGNNMPVDVVKAMGADIIIAVDIGSALVKKQELTSTIAVLNQL 252
>gi|118444446|ref|YP_878752.1| thiamine-phosphate pyrophosphorylase [Clostridium novyi NT]
gi|229558548|sp|A0Q2A0|THIE_CLONN RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|118134902|gb|ABK61946.1| thiamine-phosphate pyrophosphorylase [Clostridium novyi NT]
Length = 204
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 6/127 (4%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNP-GFGGQQ 149
H S R I K G++ +E D + + TV G
Sbjct: 83 VHLGQSDMPIELARKILGDDKVIGIS--AGNVKEAIEAEKAGADYVGLGTVFFTGTKKDI 140
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ +++ I S+++ GG+ N KS++ G D + V S+
Sbjct: 141 DEPIGLAGLKEITEKITIPSVAI---GGINKENAKSVLATGVDGISVISAILKNDDIQGA 197
Query: 210 AKRLNDL 216
+K L ++
Sbjct: 198 SKTLANI 204
>gi|332282931|ref|ZP_08395344.1| thiamin biosynthesis [Shigella sp. D9]
gi|332105283|gb|EGJ08629.1| thiamin biosynthesis [Shigella sp. D9]
Length = 342
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 184 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 243
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ L VD G+ + ++ GAD ++V ++
Sbjct: 244 NQGLETRAMLEI-----IIQQATVPLVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 298
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 299 PVNMAKAFRLAVEAGL 314
>gi|157364774|ref|YP_001471541.1| dihydroorotate dehydrogenase family protein [Thermotoga lettingae
TMO]
gi|157315378|gb|ABV34477.1| dihydroorotate dehydrogenase family protein [Thermotoga lettingae
TMO]
Length = 276
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGG---VTSRNIKSLVQAGADLLVVGSSFFNQ 203
G L + + + K + L V GG + + ++AGAD + +G++ F
Sbjct: 204 GPVLKPVALRAVYEVKNRVS----DLYVIGGGGIMNEEDADDFIKAGADAVSIGTAIFKD 259
Query: 204 KGEISYAKR 212
+S +
Sbjct: 260 PKIVSKIAK 268
>gi|317472093|ref|ZP_07931425.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Anaerostipes sp. 3_2_56FAA]
gi|316900497|gb|EFV22479.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Anaerostipes sp. 3_2_56FAA]
Length = 194
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDL 216
+R+A A + + L+V GG+T N ++ GA ++V S F + K+L+DL
Sbjct: 71 VREALAALREFPGGLQVGGGITDENASFFIEQGASHVIVTSFVFFAGMIRLERLKKLSDL 130
>gi|256372462|ref|YP_003110286.1| orotidine 5'-phosphate decarboxylase [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009046|gb|ACU54613.1| orotidine 5'-phosphate decarboxylase [Acidimicrobium ferrooxidans
DSM 10331]
Length = 233
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ ++AGAD+LVVG + + A RL
Sbjct: 193 TPRAALEAGADVLVVGRAVTEASDPVEVAARL 224
>gi|171913905|ref|ZP_02929375.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Verrucomicrobium spinosum DSM 4136]
Length = 254
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
GG+ N ++AGA ++V S F+ S A RL + A
Sbjct: 83 GGIRPENAAKYLEAGASHVIVTSYVFDDAYRFSEA-RLQQMVNEVGA 128
>gi|144898347|emb|CAM75211.1| molybdenum utilization protein ModD [Magnetospirillum
gryphiswaldense MSR-1]
Length = 276
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 6/93 (6%)
Query: 102 SLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
T + VA+ + + + +L+ + F G + + + +
Sbjct: 125 VACTRKSFPGTRAVAVKAIIAGGAVPHRLGLSETVLVFAEHLAFTGHRPLSGV---VAEL 181
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
K ++ I +EV S QAG D+L
Sbjct: 182 KQRCPEKKIVMEV---ADLDTALSAAQAGVDVL 211
>gi|15607555|ref|NP_214928.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
H37Rv]
gi|15839800|ref|NP_334837.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
CDC1551]
gi|31791592|ref|NP_854085.1| thiamine-phosphate pyrophosphorylase [Mycobacterium bovis
AF2122/97]
gi|121636328|ref|YP_976551.1| thiamine-phosphate pyrophosphorylase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148660179|ref|YP_001281702.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
H37Ra]
gi|148821610|ref|YP_001286364.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
F11]
gi|167970771|ref|ZP_02553048.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
H37Ra]
gi|215402164|ref|ZP_03414345.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
02_1987]
gi|215409926|ref|ZP_03418734.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
94_M4241A]
gi|215429234|ref|ZP_03427153.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
EAS054]
gi|218752044|ref|ZP_03530840.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis GM
1503]
gi|219556233|ref|ZP_03535309.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
T17]
gi|224988800|ref|YP_002643487.1| thiamine-phosphate pyrophosphorylase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253797337|ref|YP_003030338.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis KZN 1435]
gi|254230765|ref|ZP_04924092.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis C]
gi|254363378|ref|ZP_04979424.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis str. Haarlem]
gi|254549359|ref|ZP_05139806.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260185279|ref|ZP_05762753.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
CPHL_A]
gi|260199410|ref|ZP_05766901.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
T46]
gi|260203562|ref|ZP_05771053.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
K85]
gi|289441793|ref|ZP_06431537.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
T46]
gi|289445953|ref|ZP_06435697.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis CPHL_A]
gi|289552663|ref|ZP_06441873.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis KZN 605]
gi|289568329|ref|ZP_06448556.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis T17]
gi|289572999|ref|ZP_06453226.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis K85]
gi|289744110|ref|ZP_06503488.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
02_1987]
gi|289752443|ref|ZP_06511821.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
EAS054]
gi|289760530|ref|ZP_06519908.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis GM 1503]
gi|294995919|ref|ZP_06801610.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
210]
gi|297632896|ref|ZP_06950676.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
KZN 4207]
gi|297729871|ref|ZP_06958989.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
KZN R506]
gi|298523890|ref|ZP_07011299.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis 94_M4241A]
gi|306774508|ref|ZP_07412845.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu001]
gi|306779257|ref|ZP_07417594.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu002]
gi|306783046|ref|ZP_07421368.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu003]
gi|306787413|ref|ZP_07425735.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu004]
gi|306791965|ref|ZP_07430267.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu005]
gi|306796152|ref|ZP_07434454.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu006]
gi|306802009|ref|ZP_07438677.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu008]
gi|306966417|ref|ZP_07479078.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu009]
gi|306970612|ref|ZP_07483273.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu010]
gi|307078338|ref|ZP_07487508.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu011]
gi|307082896|ref|ZP_07492009.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu012]
gi|313657200|ref|ZP_07814080.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
KZN V2475]
gi|54039721|sp|P66917|THIE_MYCBO RecName: Full=Probable thiamine-phosphate pyrophosphorylase;
Short=TMP pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|54042245|sp|P66916|THIE_MYCTU RecName: Full=Probable thiamine-phosphate pyrophosphorylase;
Short=TMP pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|166228778|sp|A1KFN6|THIE_MYCBP RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|166228779|sp|A5TZE0|THIE_MYCTA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|1817680|emb|CAB06584.1| PROBABLE THIAMINE-PHOSPHATE PYROPHOSPHORYLASE THIE (TMP
PYROPHOSPHORYLASE) (TMP-PPASE) (THIAMINE-PHOSPHATE
SYNTHASE) [Mycobacterium tuberculosis H37Rv]
gi|13879931|gb|AAK44651.1| thiamin-phosphate pyrophosphorylase [Mycobacterium tuberculosis
CDC1551]
gi|31617178|emb|CAD93285.1| PROBABLE THIAMINE-PHOSPHATE PYROPHOSPHORYLASE THIE (TMP
PYROPHOSPHORYLASE) (TMP-PPASE) (THIAMINE-PHOSPHATE
SYNTHASE) [Mycobacterium bovis AF2122/97]
gi|121491975|emb|CAL70438.1| Probable thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|124599824|gb|EAY58834.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis C]
gi|134148892|gb|EBA40937.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis str. Haarlem]
gi|148504331|gb|ABQ72140.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
H37Ra]
gi|148720137|gb|ABR04762.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis F11]
gi|224771913|dbj|BAH24719.1| thiamine-phosphate pyrophosphorylase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253318840|gb|ACT23443.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis KZN 1435]
gi|289414712|gb|EFD11952.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
T46]
gi|289418911|gb|EFD16112.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis CPHL_A]
gi|289437295|gb|EFD19788.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis KZN 605]
gi|289537430|gb|EFD42008.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis K85]
gi|289542082|gb|EFD45731.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis T17]
gi|289684638|gb|EFD52126.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
02_1987]
gi|289693030|gb|EFD60459.1| thiamine-phosphate pyrophosphorylase [Mycobacterium tuberculosis
EAS054]
gi|289708036|gb|EFD72052.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis GM 1503]
gi|298493684|gb|EFI28978.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis 94_M4241A]
gi|308216859|gb|EFO76258.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu001]
gi|308327703|gb|EFP16554.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu002]
gi|308332065|gb|EFP20916.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu003]
gi|308335880|gb|EFP24731.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu004]
gi|308339457|gb|EFP28308.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu005]
gi|308343322|gb|EFP32173.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu006]
gi|308351162|gb|EFP40013.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu008]
gi|308355815|gb|EFP44666.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu009]
gi|308359736|gb|EFP48587.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu010]
gi|308363677|gb|EFP52528.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu011]
gi|308367329|gb|EFP56180.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis SUMu012]
gi|323721085|gb|EGB30147.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis CDC1551A]
gi|326902239|gb|EGE49172.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis W-148]
gi|328457124|gb|AEB02547.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis KZN 4207]
Length = 222
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG+ ++ + +++ AGA +VV + + + A++L +A
Sbjct: 176 IGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAA 221
>gi|269959820|ref|ZP_06174198.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835433|gb|EEZ89514.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 204
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 25/61 (40%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I K + S+ + GG+ NI L G L + S+ + + + ++ L L
Sbjct: 144 IDGLKMALETTSLPIVAIGGINESNIPQLSATGVHGLALVSAICHAEDPKAASEYLLGLM 203
Query: 218 K 218
+
Sbjct: 204 R 204
>gi|75911088|ref|YP_325384.1| indole-3-glycerol-phosphate synthase [Anabaena variabilis ATCC
29413]
gi|75704813|gb|ABA24489.1| indole-3-glycerol phosphate synthase [Anabaena variabilis ATCC
29413]
Length = 280
Score = 37.1 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 21/200 (10%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
ADF + GA + V D F +++R++R C I
Sbjct: 81 ADF-DPVAIAKAYERGGAACLSV-VTDTSF---FHGSFEILRAIRQRVPLPILCKEFIID 135
Query: 74 IDS-HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
++ A A ++ + ++ LR IH +G +A++ + + +D+
Sbjct: 136 PCQIYLARAAGADAVLLIAAILTDRELKDFLRIIHFLGMNALIAVHSLAELDRILK-LDD 194
Query: 133 IDMILIMTVNPGFGGQQLIESTIP------KIRQAKALIGKRSISLEVDGGVTSRN-IKS 185
I +I I Q L + T + ++ + I++ + G+ + +
Sbjct: 195 IRLIEI-------NNQSLQDFTTDISTTQNLLAARRSHLQNLGITVVSESGLYTHTDLSL 247
Query: 186 LVQAGADLLVVGSSFFNQKG 205
+ +AGA+ ++VG S ++
Sbjct: 248 VTEAGANAVIVGESLIKEQD 267
>gi|325957741|ref|YP_004293153.1| 2-dehydro-3-deoxyphosphogluconate aldolase [Lactobacillus
acidophilus 30SC]
gi|325334306|gb|ADZ08214.1| 2-dehydro-3-deoxyphosphogluconate aldolase [Lactobacillus
acidophilus 30SC]
Length = 205
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 17/117 (14%)
Query: 108 AMGKKTGVAINPE--TPVAILEDVIDEIDMILIM-TVNPGFGGQQLIESTIPKIRQAKAL 164
KK GV P TP +L+ + D+I I G + I+ + IR
Sbjct: 97 EYAKKRGVITVPGMMTPSEVLQQLRYGADIIKIFPATTVGPKYFKDIQGPLNHIR----- 151
Query: 165 IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
L GG++ N+ + GAD +GS FN++ K +N+L +S L
Sbjct: 152 -------LMAVGGISKNNVHQFFENGADYAGIGSGAFNKEDI--QKKNINNLHESLL 199
>gi|300709415|ref|YP_003735229.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Halalkalicoccus
jeotgali B3]
gi|299123098|gb|ADJ13437.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Halalkalicoccus
jeotgali B3]
Length = 242
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 82/215 (38%), Gaps = 29/215 (13%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM--ISSIDSH 77
+AGA+ +H +DG F A + ++ DS L I + +
Sbjct: 36 AAAARRWVEAGARTLHLVDLDGAF-EGERENAAAVAAVLETVDSELAVQLGGGIRTAEDA 94
Query: 78 INIIADAGCDIITFHPES--SPHIRRSLRTIHAMGKKTGV----------AINPETPVAI 125
I ++ D G D + + SP I R + H G+ T +
Sbjct: 95 IELL-DRGVDRVILGTAAVESPEIVREISEEHENSVMVGLDAKEGEVVVSGWTEGTGLDP 153
Query: 126 LEDVI--DEIDMILIMTVNPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDGGV-TS 180
E +E+ I+ N GQ + + ++ +A SI + GGV +
Sbjct: 154 AEVAARYEELGAGAILFTNVDVEGQLEGVKTDPVERVAEAV------SIPVVASGGVASL 207
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+I++L AGAD +VVG++ + +G S + +
Sbjct: 208 DDIRALKAAGADAVVVGTALY--EGRFSLEEAIEA 240
>gi|302916011|ref|XP_003051816.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732755|gb|EEU46103.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 259
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 12/65 (18%)
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
++ + PG G AK + L+V GG+ +N K + AGA+ +++
Sbjct: 56 HVIMLGPGNDGP------------AKEALQAWPGGLQVGGGINDKNAKEWMDAGAEKVII 103
Query: 197 GSSFF 201
S F
Sbjct: 104 TSYLF 108
>gi|224475665|ref|YP_002633271.1| pyridoxal biosynthesis lyase PdxS [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254781618|sp|B9DKX7|PDXS_STACT RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|222420272|emb|CAL27086.1| putative Vitamin B6 biosynthesis protein [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 295
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ ++Q GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMQLGADGVFVGSGIFKSEDPEKFAKAI 252
>gi|52786144|ref|YP_091973.1| N-(5'-phosphoribosyl)anthranilate isomerase [Bacillus licheniformis
ATCC 14580]
gi|163119514|ref|YP_079564.2| N-(5'-phosphoribosyl)anthranilate isomerase [Bacillus licheniformis
ATCC 14580]
gi|319645269|ref|ZP_07999502.1| N-(5'-phosphoribosyl)anthranilate isomerase [Bacillus sp. BT1B_CT2]
gi|81385225|sp|Q65I34|TRPF_BACLD RecName: Full=N-(5'-phosphoribosyl)anthranilate isomerase;
Short=PRAI
gi|52348646|gb|AAU41280.1| TrpF [Bacillus licheniformis ATCC 14580]
gi|145903021|gb|AAU23926.2| phosphoribosyl anthranilate isomerase [Bacillus licheniformis ATCC
14580]
gi|317393078|gb|EFV73872.1| N-(5'-phosphoribosyl)anthranilate isomerase [Bacillus sp. BT1B_CT2]
Length = 218
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 12/173 (6%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNI-SFGADVIRSLRSYSDSVFDCHLMI---SSIDS 76
E++ ++ A + F F + S ++ +D+ + + ++
Sbjct: 15 EDLKVTARSKADYLGF-----IFAESKRSVDPADVKRWCGETDTPGKKLVGVFVNENMSR 69
Query: 77 HINIIADAGCDIITFHP-ESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
I+ DAG D+I H E++ I+R L+++ + +T V + ID
Sbjct: 70 MAEIVKDAGLDVIQLHGDETAADIKR-LKSMTDCEIWKALPHGNDT-VQSMASFAPYIDG 127
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+I + G G + + + + L + GGV I L++
Sbjct: 128 YVIDSSVKGMRGGTGVSFSWDSVPLYIDAAQREGKRLFIAGGVNPDTIADLLK 180
>gi|322514210|ref|ZP_08067272.1| pyridoxal biosynthesis lyase PdxS [Actinobacillus ureae ATCC 25976]
gi|322119903|gb|EFX91912.1| pyridoxal biosynthesis lyase PdxS [Actinobacillus ureae ATCC 25976]
Length = 295
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|313230603|emb|CBY18819.1| unnamed protein product [Oikopleura dioica]
gi|313241227|emb|CBY33509.1| unnamed protein product [Oikopleura dioica]
Length = 244
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
I Q + K ++ L + GGV N ++ G D + GS
Sbjct: 167 AFENISQLSTICKKNNVKLMIGGGVNEANAADILALGVD-FIHGS 210
>gi|289664572|ref|ZP_06486153.1| hypothetical protein XcampvN_16238 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 230
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
G A +A + + + +MT+ F Q ++ +++ + R +
Sbjct: 132 GCAPEAIDSLAEAIALQPRLQLRGLMTIPAPFPEQARRQAAFTRMQALFEQLKTR--HRQ 189
Query: 174 VDG---GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
VD G+++ + AGA ++ VG++ F +G+ A
Sbjct: 190 VDTLSMGMSAD-FAEAIAAGATMVRVGTALFGARGQSPAA 228
>gi|242398673|ref|YP_002994097.1| PcrB like protein [Thermococcus sibiricus MM 739]
gi|259647505|sp|C6A2A3|GGGPS_THESM RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|242265066|gb|ACS89748.1| PcrB like protein [Thermococcus sibiricus MM 739]
Length = 255
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVV 196
++ + G G + I + + K+ K+ I + L V GG+ T + K +VQ+GAD++V
Sbjct: 172 LVYLEAGSGAPEHIPNEMIKV--VKSAID---VPLIVGGGIRTYEDAKEVVQSGADIIVT 226
Query: 197 GSSFFNQKGEISYAKRLNDL 216
G++ KRL +
Sbjct: 227 GTAIEKAGSLEESKKRLESI 246
>gi|145345237|ref|XP_001417123.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577350|gb|ABO95416.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 302
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 119 PETPVAILEDVIDEI-DMILIMTVNPGFGGQQLIESTIPK-IRQAKALIGKRSISLEVDG 176
P TPV + + + +++V G Q + + + + + + +++ K + V G
Sbjct: 191 PTTPVERAKKIAQATKGFVYLVSVTGVTGVQSNVATRVEQLVEELRSVTDKP---IAV-G 246
Query: 177 -GVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKKSALAI 223
GV+ +++ K +V GAD ++VGS+ GE + L LK A I
Sbjct: 247 FGVSEAKHAKQIVDWGADGVIVGSALVRALGEAKTPEEGLAALKAKAEEI 296
>gi|66096336|gb|AAY42863.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa]
Length = 114
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I R++ + P PV + + +DE+ L G L
Sbjct: 5 HIAACGGIDRAIAEARRIA--------PGKPVEVEVENLDELRQAL----EAGADIVMLD 52
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
E ++ +R A AL R+ LE GG+ ++++ + G D + +G+
Sbjct: 53 ELSLDDMRTAVALTAGRA-KLEASGGINESTLRNIAETGVDYISIGT 98
>gi|14324961|dbj|BAB59887.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 245
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ I K+ I +I L V GG+ + AGAD++V GS S
Sbjct: 172 RPVSEDTISYVKSKI---NIPLIVGGGIRDPETAMRIALAGADMIVTGSIAEKSNNVYSV 228
Query: 210 AKRL 213
+ +
Sbjct: 229 LRNI 232
>gi|301098878|ref|XP_002898531.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase, putative
[Phytophthora infestans T30-4]
gi|262104956|gb|EEY63008.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase, putative
[Phytophthora infestans T30-4]
Length = 260
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L+V GG+ + N + V+ GA ++V S F G+I + +RL LK+
Sbjct: 81 LQVGGGINADNCQFFVERGASHVIVTSYVFR-DGQIDF-ERLEKLKQ 125
>gi|262038888|ref|ZP_06012233.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia goodfellowii
F0264]
gi|261747091|gb|EEY34585.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia goodfellowii
F0264]
Length = 489
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 24/136 (17%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT--------GVAINPETPVAILEDV 129
+ + +AG DIIT + H + ++ I + K + D+
Sbjct: 235 VEALVEAGVDIITVDS-AHGHSKGVIKKIKEIRKAFPDLDLIGGNIVTK-----EAALDL 288
Query: 130 IDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR- 181
I + + V PG G + I I + + K+SI L DGG+
Sbjct: 289 IKAGVNAVKVGVGPGSICTTRVVSGVGV--PQITAILEIAEVCEKKSIGLIADGGIKLSG 346
Query: 182 NIKSLVQAGADLLVVG 197
+I + AGAD +++G
Sbjct: 347 DIVKAIAAGADCVMLG 362
>gi|193215742|ref|YP_001996941.1| thiamine-phosphate pyrophosphorylase [Chloroherpeton thalassium
ATCC 35110]
gi|193089219|gb|ACF14494.1| thiamine-phosphate pyrophosphorylase [Chloroherpeton thalassium
ATCC 35110]
Length = 212
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 167 KRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
K+S+ + V GG+ NI +++AGAD V S+ + + + + K+ A AI
Sbjct: 155 KKSLRIPVMAIGGIDYENIGEVMRAGADSAAVVSAICCAENPEAATQEIK--KQIAEAI 211
>gi|78222397|ref|YP_384144.1| hypothetical protein Gmet_1181 [Geobacter metallireducens GS-15]
gi|78193652|gb|ABB31419.1| conserved hypothetical protein [Geobacter metallireducens GS-15]
Length = 264
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 159 RQAKALIGKRSISLEVD-------G-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
R+ LI + I L + G G+T + L G D+L G+ +++K Y
Sbjct: 24 RELHRLIDRYRIDLVIANGENAAGGFGITEEKARELYSLGIDVLTSGNHVWDKKESYPYI 83
Query: 211 KRLNDLKKSA 220
+R L + A
Sbjct: 84 RREERLVRPA 93
>gi|300856470|ref|YP_003781454.1| thiamine-phosphate pyrophosphorylase [Clostridium ljungdahlii DSM
13528]
gi|300436585|gb|ADK16352.1| thiamine-phosphate pyrophosphorylase [Clostridium ljungdahlii DSM
13528]
Length = 203
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H S + R I K G++ LE + D I I T+ F G +
Sbjct: 83 VHLGQSDMPINTARKILGKDKIIGIS--AGNVDEALEAEKNGADYIGIGTIF--FTGTKK 138
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
T I + + +I GGV N K + G D + V S+ + + +
Sbjct: 139 DIDTPIGIEGLRKIYSSINIPAVAIGGVNETNFKEVFSTGVDGISVISAILGKSDITAAS 198
Query: 211 KRL 213
K L
Sbjct: 199 KAL 201
>gi|258592154|emb|CBE68459.1| Thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase)
(TMP-PPase) (Thiamine-phosphate synthase) [NC10
bacterium 'Dutch sediment']
Length = 214
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
G IRQ +A I I++ GG+ N+ + AGA + V S+
Sbjct: 137 GTKATGYEPRGCDIIRQLRARIDLPLIAI---GGIALSNVGEAMAAGATGVAVISAIVGA 193
Query: 204 KG 205
Sbjct: 194 DD 195
>gi|289748898|ref|ZP_06508276.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis T92]
gi|289689485|gb|EFD56914.1| thiamine-phosphate pyrophosphorylase thiE [Mycobacterium
tuberculosis T92]
Length = 212
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG+ ++ + +++ AGA +VV + + + A++L +A
Sbjct: 166 IGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAA 211
>gi|258511901|ref|YP_003185335.1| thiamine-phosphate pyrophosphorylase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478627|gb|ACV58946.1| thiamine-phosphate pyrophosphorylase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 212
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEI 207
A I + GG+T ++ AGA+ + VV S+ +
Sbjct: 154 LAACRRAVRIPIVGIGGITVDRAPEVMAAGANGVAVV-SAIMSAPDPK 200
>gi|251779903|ref|ZP_04822823.1| thiamine-phosphate diphosphorylase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084218|gb|EES50108.1| thiamine-phosphate diphosphorylase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 210
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + K + K SI + V GG+ IK + D L + S+ QK + L +
Sbjct: 147 MSELKEMTQKVSIPVVVIGGINKERIKDFKETDIDGLAIVSAIIAQKDIEKATRELKE 204
>gi|58617508|ref|YP_196707.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
Gardel]
gi|58417120|emb|CAI28233.1| Inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
Gardel]
Length = 485
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
IR + I + DGG+ +I + AGAD++++GS F E
Sbjct: 320 IRNVVNACKNKKIRIIADGGIKYSGDIAKSIAAGADVVMIGS-IFAGTDE 368
>gi|25028147|ref|NP_738201.1| multifunctional thiamine-phosphate
pyrophosphorylase/synthase/phosphomethylpyrimidine
kinase [Corynebacterium efficiens YS-314]
gi|259507204|ref|ZP_05750104.1| phosphomethylpyrimidine kinase [Corynebacterium efficiens YS-314]
gi|47606178|sp|Q8FTH8|THIED_COREF RecName: Full=Multifunctional protein thiED; Includes: RecName:
Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase; Includes: RecName:
Full=Hydroxymethylpyrimidine/phosphomethylpyrimidine
kinase; AltName: Full=Hydroxymethylpyrimidine kinase;
Short=HMP kinase; AltName: Full=Hydroxymethylpyrimidine
phosphate kinase; Short=HMP-P kinase;
Short=HMP-phosphate kinase; Short=HMPP kinase
gi|23493431|dbj|BAC18401.1| putative thiamin biosynthesis protein [Corynebacterium efficiens
YS-314]
gi|259165219|gb|EEW49773.1| phosphomethylpyrimidine kinase [Corynebacterium efficiens YS-314]
Length = 739
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 6/62 (9%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ K+ +A I+ GGV N L + G D L V S+ A+ L
Sbjct: 157 AMAKVARA------HGIASVAIGGVGLANAADLARTGVDGLCVVSAIMAAPSPAEAAREL 210
Query: 214 ND 215
D
Sbjct: 211 LD 212
>gi|311693239|gb|ADP96112.1| thiamine-phosphate pyrophosphorylase [marine bacterium HP15]
Length = 219
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQK 204
+ + GGVT+ N + L++AGAD+L VVG F
Sbjct: 158 GLPITAIGGVTTDNGEPLIRAGADMLAVVG-GLFGGD 193
>gi|291483646|dbj|BAI84721.1| transcriptional regulator TenI [Bacillus subtilis subsp. natto
BEST195]
Length = 205
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS----YAKRLNDLK 217
GG+T ++ + QAGAD + V S F+ + Y+++L +++
Sbjct: 154 IGGMTPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKEMR 200
>gi|165975986|ref|YP_001651579.1| pyridoxal biosynthesis lyase PdxS [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|254781581|sp|B0BUD0|PDXS_ACTPJ RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|165876087|gb|ABY69135.1| putative pyridoxine biosynthesis protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 295
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|99034743|ref|ZP_01314672.1| hypothetical protein Wendoof_01000513 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 366
Score = 37.1 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE--- 152
S ++ ++R I M T + E +ID + + + PG I
Sbjct: 124 SENVINTIREIKKMYPNTQLIGGNIATKEAAEALIDAGVDAVKVGIGPGSICTTRIVTGV 183
Query: 153 --STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
I+ R++ L DGGV ++ + AGAD +++GS F E
Sbjct: 184 GVPQFSAIKNVAEACRARNVRLIADGGVKYSGDVAKAIAAGADSVMIGS-IFAGTDE 239
>gi|320334451|ref|YP_004171162.1| Tryptophan synthase subunit alpha [Deinococcus maricopensis DSM
21211]
gi|319755740|gb|ADV67497.1| Tryptophan synthase alpha chain [Deinococcus maricopensis DSM
21211]
Length = 267
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 19/182 (10%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISS-----IDSHINIIADAGCDIITFHPESSPHIRRSLRT 105
+ +R+LR+ S + I+ + + + +AG D +
Sbjct: 88 FEYVRALRAESSTPILLMTYINPVYAVGPERFMRLAVEAGVDGLIL----PDLPPDQDEE 143
Query: 106 IHAMGKKTGVAIN----PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
I A+ ++ G+A+ P + + V + G G + S + ++
Sbjct: 144 IQALARQAGLALTFLIAPTSTPERVALVTRACTGFVYAVSVTGVTGAR-EGSALGEVPAL 202
Query: 162 KALIGKR-SISLEVDG-GVT-SRNIKSLV-QAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
AL + S+ + V G GV + +++ AGAD +VVGS+F A L D
Sbjct: 203 VALARQHTSLPVAV-GFGVKDAATARAVAVDAGADGVVVGSAFIQAIERGEDAAALADAI 261
Query: 218 KS 219
+S
Sbjct: 262 RS 263
>gi|312880661|ref|ZP_07740461.1| Quinolinate phosphoribosyl transferase [Aminomonas paucivorans DSM
12260]
gi|310783952|gb|EFQ24350.1| Quinolinate phosphoribosyl transferase [Aminomonas paucivorans DSM
12260]
Length = 350
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
PG G + + ++R L G +++ V GG++ I+ L +AGA VGS
Sbjct: 254 TPGERG-GVTPDLVREVRYRLNLAGYGHVAVLVSGGLSPDRIRLLAEAGAAGFGVGSYI 311
>gi|313683018|ref|YP_004060756.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Sulfuricurvum
kujiense DSM 16994]
gi|313155878|gb|ADR34556.1| 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)
imidazole-4-carboxamide isomerase [Sulfuricurvum
kujiense DSM 16994]
Length = 232
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+TP +++ + + ++ +N F G+ + +IR + ++ L++ GG+
Sbjct: 30 DTPWELVKTFEEMGAKWVHLVDLNGAFAGE---PKNLEQIRAIRENC---NVKLQLGGGI 83
Query: 179 TSR-NIKSLVQAGADLLVVGS 198
I+ ++ G D L++GS
Sbjct: 84 RDEATIQRYLELGIDRLILGS 104
>gi|218246331|ref|YP_002371702.1| tryptophan synthase subunit alpha [Cyanothece sp. PCC 8801]
gi|257059378|ref|YP_003137266.1| tryptophan synthase subunit alpha [Cyanothece sp. PCC 8802]
gi|226707917|sp|B7JUK2|TRPA_CYAP8 RecName: Full=Tryptophan synthase alpha chain
gi|218166809|gb|ACK65546.1| tryptophan synthase, alpha subunit [Cyanothece sp. PCC 8801]
gi|256589544|gb|ACV00431.1| tryptophan synthase, alpha subunit [Cyanothece sp. PCC 8802]
Length = 267
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 63/172 (36%), Gaps = 11/172 (6%)
Query: 53 VIRSLRSYSDSVFDCHLMISS-----IDSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
V++ + + + +++ + + AG + L+ H
Sbjct: 84 VVKEVSPEIKAPIILFTYYNPIFYRGVEAFLQQVKAAGVQGLVVPDLPLEEAESLLKPAH 143
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK-ALIG 166
+G + + P +P+ +E + + + + G G + ++++ +L
Sbjct: 144 EVGIAVTLLVAPTSPIERIEAIARQSQGFIYLVSVTGVTG--MRSQVTSRVKELLTSLRS 201
Query: 167 KRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ V G G++ + + GAD ++VGS+ + E + + L +
Sbjct: 202 ATDKPIGV-GFGISKPEHALQVKNWGADAVIVGSAMVKRLAEGTPEEGLKAI 252
>gi|167038054|ref|YP_001665632.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116463|ref|YP_004186622.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166856888|gb|ABY95296.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929554|gb|ADV80239.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 211
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 6/130 (4%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H +R I K GV+ T L+ D D + V F
Sbjct: 81 VHVGQEDLPADIVRKIIGRDKIVGVSAR--TVEEALKAQRDGADY---LGVGAVFKTPTK 135
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL-VQAGADLLVVGSSFFNQKGEISY 209
E+ I K + +I + GG+T N + +++GAD + S+ F E +
Sbjct: 136 PEAEAIGIEGLKKIKEAVTIPVVAIGGITKDNAYEVMLKSGADGISSVSAVFYGDIENNT 195
Query: 210 AKRLNDLKKS 219
K L +KK+
Sbjct: 196 RKLLEVIKKA 205
>gi|328554027|gb|AEB24519.1| transcriptional regulator TenI [Bacillus amyloliquefaciens TA208]
gi|328911193|gb|AEB62789.1| inhibitor of thiaminase TenA [Bacillus amyloliquefaciens LL3]
Length = 205
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL-NDL 216
I + SI + GGVT + I QA D + V S F+ + AKR +
Sbjct: 137 ISLLSDIKSTLSIPVIAIGGVTLQTIGKAKQAKPDGIAVMSGIFSAENPEEAAKRYARAI 196
Query: 217 KKS 219
+++
Sbjct: 197 REA 199
>gi|307261028|ref|ZP_07542710.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869330|gb|EFN01125.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 295
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|224372198|ref|YP_002606570.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Nautilia profundicola
AmH]
gi|254801160|sp|B9L7G2|HIS4_NAUPA RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|223589349|gb|ACM93085.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Nautilia profundicola AmH]
Length = 235
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ + I+ +N F G+ I KIR+ ++ +++ GG+ IK + G +
Sbjct: 45 EWLHIVDLNGAFAGEPKNIEQIEKIRK------NTNLKIQLGGGIRDEDTIKRYLDLGIN 98
Query: 193 LLVVGS 198
L++GS
Sbjct: 99 RLILGS 104
>gi|254167145|ref|ZP_04873998.1| Nicotinate phosphoribosyltransferase family, putative
[Aciduliprofundum boonei T469]
gi|197624001|gb|EDY36563.1| Nicotinate phosphoribosyltransferase family, putative
[Aciduliprofundum boonei T469]
Length = 391
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
E I ++R + G + + + V GG+ +++ L AGA VG+S N K I YA
Sbjct: 246 EDIIKEVRWELDIRGYKDVGIFVSGGLDEDSVRRLRNAGATGFGVGTSLSNAKT-IDYAM 304
Query: 212 RLNDLKKSALA 222
+ +++ +A
Sbjct: 305 DIVEIEGKPMA 315
>gi|220924827|ref|YP_002500129.1| thiamine-phosphate pyrophosphorylase [Methylobacterium nodulans ORS
2060]
gi|219949434|gb|ACL59826.1| thiamine-phosphate pyrophosphorylase [Methylobacterium nodulans ORS
2060]
Length = 231
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY-AKRLNDLKKSALAI 223
G+ N +++ AGAD + + S+ F + A+ L + ALA
Sbjct: 180 GIDRSNAAAVIGAGADGIALVSALFGAPEVVEARARDLRGIVDGALAA 227
>gi|163734340|ref|ZP_02141780.1| thiamine-phosphate pyrophosphorylase [Roseobacter litoralis Och
149]
gi|161392348|gb|EDQ16677.1| thiamine-phosphate pyrophosphorylase [Roseobacter litoralis Och
149]
Length = 198
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 70/179 (39%), Gaps = 18/179 (10%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
+ + G K + + D D +R+ + S + H + ++ H +
Sbjct: 16 LRRMLPLGVKLVQLRIKDQ--------PQDALRAQLTESRELCRAHSALLVVNDHWQLAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
D CD + E + I + G K G++ + + +A ++ + D + + +
Sbjct: 68 DLDCDWVHLGQEDLD--AADVAAIRSAGLKLGISTHDKAELARALEL--KPDYVALGPIY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
P + + + + K+ + K +G I L GG+++ AGAD++ S+
Sbjct: 124 PTILKKMKWHQQGVEKLSEWKDRVG--DIPLVAIGGMSTDRAPGAFDAGADVV---SAV 177
>gi|46143727|ref|ZP_00204559.1| COG0214: Pyridoxine biosynthesis enzyme [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208054|ref|YP_001053279.1| pyridoxal biosynthesis lyase PdxS [Actinobacillus pleuropneumoniae
L20]
gi|303252203|ref|ZP_07338371.1| pyridoxine biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247546|ref|ZP_07529590.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|166980411|sp|A3MZT8|PDXS_ACTP2 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|126096846|gb|ABN73674.1| pyridoxal biosynthesis lyase PdxS [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|302648986|gb|EFL79174.1| pyridoxine biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855911|gb|EFM88070.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 295
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|163750969|ref|ZP_02158201.1| hypothetical protein KT99_07518 [Shewanella benthica KT99]
gi|161329259|gb|EDQ00257.1| hypothetical protein KT99_07518 [Shewanella benthica KT99]
Length = 740
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 167 KRSISLEVDGGVTSRNIKSLVQA-GADLLVV---GSSFFNQKGEISYAKRLNDL 216
+ L +DGG+ + +V+A GAD+++ GSS ++ S LN L
Sbjct: 199 EYEGKLLIDGGIGNNMPVDVVKAMGADIIIAVDIGSSLVKKEELTSTIAVLNQL 252
>gi|312128475|ref|YP_003993349.1| thiamine-phosphate pyrophosphorylase [Caldicellulosiruptor
hydrothermalis 108]
gi|311778494|gb|ADQ07980.1| thiamine-phosphate pyrophosphorylase [Caldicellulosiruptor
hydrothermalis 108]
Length = 221
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 47/149 (31%), Gaps = 18/149 (12%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI----NPETPVAILEDVID 131
H+++ G D H + + +R I GV E V D I
Sbjct: 80 DHVDLCQMVGADG--VHLGQEDYPVKEVRKILGEDFIIGVTTHTKEQVEKAVEDGADYIG 137
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+ T + + + A I V GG+ N+K +++AGA
Sbjct: 138 LGPVFQSFTKDKPHP-----PIGLEMVSWAATYCK---IPFVVIGGIKEHNLKDVLEAGA 189
Query: 192 DL--LVVGSSFFNQKGEISYAKRLNDLKK 218
LV + KRL D+ K
Sbjct: 190 KCVSLV--TEIVGSDDISQKIKRLWDIIK 216
>gi|303251561|ref|ZP_07337735.1| pyridoxine biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252126|ref|ZP_07534025.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649559|gb|EFL79741.1| pyridoxine biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860426|gb|EFM92440.1| Pyridoxal biosynthesis lyase pdxS [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 295
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSENPEKFAKAI 252
>gi|254718423|ref|ZP_05180234.1| thiamine-phosphate pyrophosphorylase [Brucella sp. 83/13]
gi|265983388|ref|ZP_06096123.1| thiamine-phosphate pyrophosphorylase [Brucella sp. 83/13]
gi|306838849|ref|ZP_07471679.1| thiamine-phosphate pyrophosphorylase [Brucella sp. NF 2653]
gi|264661980|gb|EEZ32241.1| thiamine-phosphate pyrophosphorylase [Brucella sp. 83/13]
gi|306406047|gb|EFM62296.1| thiamine-phosphate pyrophosphorylase [Brucella sp. NF 2653]
Length = 203
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 21/183 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G K + + D + IR+ R + DC L+++
Sbjct: 13 SADW------LERMVPLGIKLVQLRIKDKADAQLRA----EIRAARDNCAAH-DCQLIVN 61
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + + GC+ I E L I A G K GV+ + E + V +
Sbjct: 62 D---YWKLALEEGCNFIHLGQEDLDGAD--LDAIRAGGLKLGVSSHDEAELDRALSV--K 114
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + + P + + + +P++ + KA IG +I L GG++ + AGA
Sbjct: 115 PDYIALGPIYPTILKKMKWHQQGLPRLGEWKARIG--NIPLVGIGGLSVERAPGVFAAGA 172
Query: 192 DLL 194
D++
Sbjct: 173 DIV 175
>gi|13541565|ref|NP_111253.1| geranylgeranylglyceryl phosphate synthase-like protein
[Thermoplasma volcanium GSS1]
gi|31563210|sp|Q97AR4|GGGPS_THEVO RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
Length = 252
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ I K+ I +I L V GG+ + AGAD++V GS S
Sbjct: 179 RPVSEDTISYVKSKI---NIPLIVGGGIRDPETAMRIALAGADMIVTGSIAEKSNNVYSV 235
Query: 210 AKRL 213
+ +
Sbjct: 236 LRNI 239
>gi|170731940|ref|YP_001763887.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
cenocepacia MC0-3]
gi|169815182|gb|ACA89765.1| KDPG and KHG aldolase [Burkholderia cenocepacia MC0-3]
Length = 225
Score = 37.1 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
++ +A+I + + V GG++ N++ + AGA+ +GS+ +
Sbjct: 155 VKAWRAVIDRAVPLIPV-GGISPDNMQPFLDAGANGFGLGSALYRPGQSADTTAA 208
>gi|304316065|ref|YP_003851210.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777567|gb|ADL68126.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 235
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
I ++ ++ G+ + +I IR+ S +EV GG+ K L G D +
Sbjct: 47 IHVVDLDGAKEGRLVNSKSIENIRK------SFSGEIEVGGGIRNLETAKHLFNLGIDYI 100
Query: 195 VVGS-SFFNQK 204
++GS + +N+
Sbjct: 101 ILGSIAVYNKN 111
>gi|229018062|ref|ZP_04174938.1| Short chain dehydrogenase [Bacillus cereus AH1273]
gi|229024094|ref|ZP_04180565.1| Short chain dehydrogenase [Bacillus cereus AH1272]
gi|228737190|gb|EEL87714.1| Short chain dehydrogenase [Bacillus cereus AH1272]
gi|228743331|gb|EEL93455.1| Short chain dehydrogenase [Bacillus cereus AH1273]
Length = 238
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 171 SLEVDGG---VTSRNIKSLVQAGADLLVVGSS 199
+ + GG + K ++ GA +++ GSS
Sbjct: 10 HIVIIGGSSGIGLATAKQAIEQGAHVIIAGSS 41
>gi|158428194|pdb|2DZT|A Chain A, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(D110a) From A Hyperthermophile, Pyrococcus Furiosus
gi|158428195|pdb|2DZT|B Chain B, Structure Of Mutant Tryptophan Synthase Alpha-Subunit
(D110a) From A Hyperthermophile, Pyrococcus Furiosus
Length = 248
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 23/183 (12%)
Query: 51 ADVIRSLRSYSDSVFDCHLMISSID------SHINIIADAGCDIITFHPESSPHIRRSLR 104
+++ R +S + + + + + +G I H +
Sbjct: 69 FWIVKEFRRHSSTPI-VLMTYYNPIYRAGVRNFLAEAKASGVAGILVVDLPVFHAKEFTE 127
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEI--DMILIMTVNPGFGGQQLIEST-IPKIRQA 161
G KT P TP L+ VID++ + ++++ G ++ I T +R+A
Sbjct: 128 IAREEGIKTVFLAAPNTPDERLK-VIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186
Query: 162 KALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSS---FFNQKGEISY---AKRL 213
K + + + V G GV+ ++ SL++ GA+ +VVGS+ +KG + K++
Sbjct: 187 KRICRNK---VAV-GFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKGREATEFLKKKV 242
Query: 214 NDL 216
+L
Sbjct: 243 EEL 245
>gi|148269724|ref|YP_001244184.1| orotidine 5'-phosphate decarboxylase [Thermotoga petrophila RKU-1]
gi|170288399|ref|YP_001738637.1| orotidine 5'-phosphate decarboxylase [Thermotoga sp. RQ2]
gi|222099310|ref|YP_002533878.1| Orotidine 5'-phosphate decarboxylase [Thermotoga neapolitana DSM
4359]
gi|147735268|gb|ABQ46608.1| orotidine-5'-phosphate decarboxylase [Thermotoga petrophila RKU-1]
gi|170175902|gb|ACB08954.1| orotidine 5'-phosphate decarboxylase [Thermotoga sp. RQ2]
gi|221571700|gb|ACM22512.1| Orotidine 5'-phosphate decarboxylase [Thermotoga neapolitana DSM
4359]
Length = 201
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 18/160 (11%)
Query: 63 SVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP 122
D + + A G T H + R + K V + +
Sbjct: 54 KFCDIPSTVERSIKSWDHPAIIGF---TVHSCAGYESVE--RALRTTDKHVFVVVKLTSM 108
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV---D--GG 177
LED +D I+ + + + G ++ KI K I I +EV D
Sbjct: 109 EGSLEDYMDRIEKLNKLGCDFVLPG-PWAKALREKI---KGKILVPGIRMEVKADDQKDV 164
Query: 178 VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
VT +K + AD V+G + + KR+ +++
Sbjct: 165 VTLEEMKGI----ADFAVLGREIYLSENPGEKIKRIKEMR 200
>gi|73857961|gb|AAZ90668.1| ThiG [Shigella sonnei Ss046]
gi|81247744|gb|ABB68452.1| thiamin biosynthesis, thiazole moiety [Shigella boydii Sb227]
Length = 281
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 123 IHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 182
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 183 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 237
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 238 PVNMAKAFRLAVEAGL 253
>gi|29346062|ref|NP_809565.1| thiamine-phosphate pyrophosphorylase [Bacteroides thetaiotaomicron
VPI-5482]
gi|41018344|sp|Q8AA13|THIE_BACTN RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|29337956|gb|AAO75759.1| putative thiamine-phosphate pyrophosphorylase [Bacteroides
thetaiotaomicron VPI-5482]
Length = 209
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 164 LIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ + +I L V GG+T +I ++++ G + + + + + + +++ ++K+
Sbjct: 150 QMKEANIELPVVAIGGITREDIPAILETGVNGIALSGTILRAEDPAAETRKILNMKR 206
>gi|302391099|ref|YP_003826919.1| quinolinate phosphoribosyl transferase [Acetohalobium arabaticum
DSM 5501]
gi|302203176|gb|ADL11854.1| Quinolinate phosphoribosyl transferase [Acetohalobium arabaticum
DSM 5501]
Length = 346
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 158 IRQAKALIGKRS---ISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+++ +A + + +++ V GG+T I +L G D VGS
Sbjct: 262 VKEVRARLDQAGHDYVNIFVSGGITPERILNLKDLGVDGFGVGSYI 307
>gi|300907544|ref|ZP_07125182.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 84-1]
gi|301302197|ref|ZP_07208329.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 124-1]
gi|300400711|gb|EFJ84249.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 84-1]
gi|300842360|gb|EFK70120.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 124-1]
gi|315253063|gb|EFU33031.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 85-1]
gi|323943592|gb|EGB39701.1| thiazole biosynthesis protein ThiG [Escherichia coli H120]
Length = 256
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETCAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|323701909|ref|ZP_08113579.1| metallophosphoesterase [Desulfotomaculum nigrificans DSM 574]
gi|323533213|gb|EGB23082.1| metallophosphoesterase [Desulfotomaculum nigrificans DSM 574]
Length = 259
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G+T K L AG D+L +G+ +N+K I Y + + + A
Sbjct: 46 GITKEIAKQLFAAGVDVLTMGNHVWNKKEIIDYIDKEKRIIRPA 89
>gi|61680550|pdb|1YAD|A Chain A, Structure Of Teni From Bacillus Subtilis
gi|61680551|pdb|1YAD|B Chain B, Structure Of Teni From Bacillus Subtilis
gi|61680552|pdb|1YAD|C Chain C, Structure Of Teni From Bacillus Subtilis
gi|61680553|pdb|1YAD|D Chain D, Structure Of Teni From Bacillus Subtilis
Length = 221
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS----YAKRL 213
+ + + SI + GG+T ++ + QAGAD + V S F+ + Y+++L
Sbjct: 153 VSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKL 212
Query: 214 NDLK 217
+++
Sbjct: 213 KEMR 216
>gi|227511945|ref|ZP_03941994.1| 3-hexulose-6-phosphate synthase [Lactobacillus buchneri ATCC 11577]
gi|227084848|gb|EEI20160.1| 3-hexulose-6-phosphate synthase [Lactobacillus buchneri ATCC 11577]
Length = 207
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 171 SLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ V GG+ K L + G A+ ++VGS ++ AK+ ++ K
Sbjct: 159 RISVAGGIDLETTKKLAEQGIAESVIVGSKIIKTDDPVASAKQFMEVIK 207
>gi|315048313|ref|XP_003173531.1| 5-proFAR isomerase [Arthroderma gypseum CBS 118893]
gi|311341498|gb|EFR00701.1| 5-proFAR isomerase [Arthroderma gypseum CBS 118893]
Length = 258
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
I +A + + GG+T +N + + AGA+ +VV S F
Sbjct: 69 IEALRAWPD--GLHIA--GGITDKNAQYWLDAGAEKVVVTSYLF 108
>gi|269102969|ref|ZP_06155666.1| indole-3-glycerol phosphate synthase/phosphoribosylanthranilate
isomerase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162867|gb|EEZ41363.1| indole-3-glycerol phosphate synthase/phosphoribosylanthranilate
isomerase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 471
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 13/125 (10%)
Query: 75 DSHINIIADAGCDIITFH-PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+ + + G + H E + +I + + + L D + ++
Sbjct: 319 EEIVQTVKALGLYGVQLHGQEDTAYIAELTKQLQESQITCQLWKAYGIAGEQLPDFLPDV 378
Query: 134 DMILI---MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN---IKSLV 187
D L+ + G GQ+ +L ++ L + GG+ N +
Sbjct: 379 DRHLLDCKVGQQLGGTGQRFD------WSLLDSLSEQQKSQLMIAGGINPSNAFIAIQIH 432
Query: 188 QAGAD 192
AG D
Sbjct: 433 CAGLD 437
>gi|194439777|ref|ZP_03071844.1| thiazole biosynthesis protein ThiG [Escherichia coli 101-1]
gi|253775380|ref|YP_003038211.1| thiazole synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254163932|ref|YP_003047040.1| thiazole synthase [Escherichia coli B str. REL606]
gi|300928809|ref|ZP_07144317.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 187-1]
gi|194421274|gb|EDX37294.1| thiazole biosynthesis protein ThiG [Escherichia coli 101-1]
gi|242379521|emb|CAQ34337.1| thiazole synthase [Escherichia coli BL21(DE3)]
gi|253326424|gb|ACT31026.1| thiazole biosynthesis family protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975833|gb|ACT41504.1| thiazole synthase [Escherichia coli B str. REL606]
gi|253979989|gb|ACT45659.1| thiazole synthase [Escherichia coli BL21(DE3)]
gi|300463190|gb|EFK26683.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 187-1]
gi|309704406|emb|CBJ03755.1| thiazole biosynthesis protein [Escherichia coli ETEC H10407]
gi|323958917|gb|EGB54592.1| thiazole biosynthesis protein ThiG [Escherichia coli H489]
gi|323969064|gb|EGB64372.1| thiazole biosynthesis protein ThiG [Escherichia coli TA007]
Length = 256
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETCAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|254295059|ref|YP_003061082.1| KDPG and KHG aldolase [Hirschia baltica ATCC 49814]
gi|254043590|gb|ACT60385.1| KDPG and KHG aldolase [Hirschia baltica ATCC 49814]
Length = 211
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
I+ +A++ + ++ V GG+ + N+ V+ G + VGS+ + I+ K
Sbjct: 143 IKALRAILPEDALLAAV-GGINAGNLADFVKVGTNGFGVGSAIYTSDKSIADIKA 196
>gi|227524928|ref|ZP_03954977.1| 3-hexulose-6-phosphate synthase [Lactobacillus hilgardii ATCC 8290]
gi|227087916|gb|EEI23228.1| 3-hexulose-6-phosphate synthase [Lactobacillus hilgardii ATCC 8290]
Length = 207
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 171 SLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ V GG+ K L + G A+ ++VGS ++ AK+ ++ K
Sbjct: 159 RISVAGGIDLETTKKLAEQGIAESVIVGSKIIKTDDPVASAKQFMEVIK 207
>gi|224437731|ref|ZP_03658678.1| nicotinate-nucleotide pyrophosphorylase [Helicobacter cinaedi CCUG
18818]
gi|313144177|ref|ZP_07806370.1| nicotinate-nucleotide pyrophosphorylase [Helicobacter cinaedi CCUG
18818]
gi|313129208|gb|EFR46825.1| nicotinate-nucleotide pyrophosphorylase [Helicobacter cinaedi CCUG
18818]
Length = 277
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
I K+ + K + LE G + NI Q+G D + VGS K
Sbjct: 218 IEKVVAYRNEYAKHT-KLEASGNINLENIVEYAQSGVDAISVGSLIHQAK 266
>gi|113952762|ref|YP_730005.1| thiamine-phosphate pyrophosphorylase [Synechococcus sp. CC9311]
gi|113880113|gb|ABI45071.1| thiamine-phosphate pyrophosphorylase [Synechococcus sp. CC9311]
Length = 340
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 175 DGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRL 213
GG+ I S+ AGA + VV S+ + ++ L
Sbjct: 297 IGGIDIETIPSVRAAGAQRVAVV-SAIMSSNDPEEASRTL 335
>gi|39997034|ref|NP_952985.1| nicotinate-nucleotide pyrophosphorylase [Geobacter sulfurreducens
PCA]
gi|39983924|gb|AAR35312.1| nicotinate-nucleotide pyrophosphorylase [Geobacter sulfurreducens
PCA]
gi|298506051|gb|ADI84774.1| quinolinate phosphoribosyltransferase (decarboxylating) [Geobacter
sulfurreducens KN400]
Length = 276
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 12/106 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I ++R A + E LE+V + + G L
Sbjct: 165 HIAAAGGITEAVRRARAYIPH---TMKIEVETECLEEVAEAL--------EAGADIIMLD 213
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ +R+A LI R++ +E GGV ++ + + G D++ VG
Sbjct: 214 NMDLDAMRRAVGLIAGRAL-VEASGGVNLETVRGIAETGVDIISVG 258
>gi|73662101|ref|YP_300882.1| thiamine-phosphate pyrophosphorylase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|123643064|sp|Q49Z39|THIE_STAS1 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|72494616|dbj|BAE17937.1| thiamine monophosphate synthase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 212
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ I + +A + + GG+ N + ++QAGAD + + S+ + +
Sbjct: 147 LPVGPEMITKLRAHV--NHFPIVAIGGINVENTREVMQAGADGISIISAITKSENISNTI 204
>gi|89095897|ref|ZP_01168791.1| hexulose-6-phosphate synthase [Bacillus sp. NRRL B-14911]
gi|89089643|gb|EAR68750.1| hexulose-6-phosphate synthase [Bacillus sp. NRRL B-14911]
Length = 211
Score = 37.1 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 171 SLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + GG++ + I +L + D+ +VGS+ + + + L L
Sbjct: 161 EIAIAGGISEKTIGTLKNSIVDIAIVGSAITGSEKPGASSLSLKRL 206
>gi|332797034|ref|YP_004458534.1| tryptophan synthase subunit alpha [Acidianus hospitalis W1]
gi|332694769|gb|AEE94236.1| tryptophan synthase, alpha subunit [Acidianus hospitalis W1]
Length = 244
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
Query: 52 DVIRSLRSYSDSVFDCHLMISS----IDSHINIIADAGCDIITFHPESSPHIR---RSLR 104
+++ R + +D ++ +A G D I F ++ + ++
Sbjct: 66 PLLKETRDRVKIPIIILTYLEDWLPVLDDFLSNLAKIGIDGILFPDLIIDYVDEYEKYVK 125
Query: 105 TIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK-IRQAKA 163
I G K + P P +++ V D+ L V P G I ++ I + +
Sbjct: 126 KIKDHGLKAVIFTAPSVPDPLIQKVSKISDIFLYYGVRPTTG--VPIPVSVDSLITRIRI 183
Query: 164 LIGKRSISLEVDG-GVTS-RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
L+ + L V G G++ +++ ++AGAD + +G+++ + +N +K
Sbjct: 184 LVDNK---LVV-GFGLSDVEDMRKALRAGADGIAIGTAYIEAIEKGGVQDAINLVK 235
>gi|254994667|ref|ZP_05276857.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
str. Mississippi]
gi|255002775|ref|ZP_05277739.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
str. Puerto Rico]
Length = 488
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----GVAINPETPVAILEDVIDEI 133
+ A D+I + H R ++TI + + N T L V +
Sbjct: 231 AEALIQAEADVIVV-DTAHGHSARVIQTIREIKALYPDAQVIGGNVATAAGALALVEAGV 289
Query: 134 DMILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLV 187
D + + + PG I I+ + + DGG+ +I +
Sbjct: 290 DAVKV-GIGPGSICTTRIVTGVGVPQFSAIKNVAEACKGTGVRVIADGGIKYSGDIAKSI 348
Query: 188 QAGADLLVVGSSFFNQKGE 206
AGAD++++GS F E
Sbjct: 349 AAGADVVMIGS-IFAGTDE 366
>gi|126656633|ref|ZP_01727847.1| nicotinate-nucleotide pyrophosphorylase [Cyanothece sp. CCY0110]
gi|126621853|gb|EAZ92561.1| nicotinate-nucleotide pyrophosphorylase [Cyanothece sp. CCY0110]
Length = 280
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 9/103 (8%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I+ ++ T +E+ ++ I+++ +L+
Sbjct: 168 HIKAVGSIQGAIEKTRQTIPYPLTVEVETTTFKEVEEALNYGADIIML----DNMNLELM 223
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + IR+ + I +E G +T NI+ + G D +
Sbjct: 224 KECVKYIRE-----KNKQIKIEASGNITLDNIRQVALTGVDYI 261
>gi|150398803|ref|YP_001322570.1| nicotinate-nucleotide pyrophosphorylase [Methanococcus vannielii
SB]
gi|150011506|gb|ABR53958.1| nicotinate-nucleotide pyrophosphorylase [Methanococcus vannielii
SB]
Length = 297
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I + I + V I +T + L++V++ I+++ F ++ I
Sbjct: 183 HIKALG-IFECFKKIKKLSFSKKVEIEVDT-LEQLKEVLNYKPDIVLL---DNFSTEK-I 236
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
E + I + R I +EV GG+T +N+ + D++ +GS + +
Sbjct: 237 EYALKIILDFEKNNNFRPI-IEVSGGITEKNVLEYAKFNVDVISMGSLIHSAR 288
>gi|296332588|ref|ZP_06875049.1| transcriptional regulator TenI [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|296150506|gb|EFG91394.1| transcriptional regulator TenI [Bacillus subtilis subsp. spizizenii
ATCC 6633]
Length = 163
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS----YAKRL 213
+ K I I++ GG+T ++ + +AGA+ + V S F+ + Y+++L
Sbjct: 98 LSDIKQRISVPVIAI---GGMTPDRLRDVKRAGAEGIAVMSGIFSSADPLEAARRYSRKL 154
Query: 214 NDLK 217
+++
Sbjct: 155 KEMR 158
>gi|223040873|ref|ZP_03611137.1| thiamine-phosphate pyrophosphorylase (TMPpyrophosphorylase)
(TMP-PPase) (Thiamine-phosphate synthase) [Campylobacter
rectus RM3267]
gi|222877835|gb|EEF12952.1| thiamine-phosphate pyrophosphorylase (TMPpyrophosphorylase)
(TMP-PPase) (Thiamine-phosphate synthase) [Campylobacter
rectus RM3267]
Length = 331
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
++ + + K SI GG+ N+ ++ AGA
Sbjct: 287 LKFLREICEKLSIKTYAIGGINFENLSAIKDAGA 320
>gi|212224513|ref|YP_002307749.1| nicotinate phosphoribosyltransferase [Thermococcus onnurineus NA1]
gi|212009470|gb|ACJ16852.1| Nicotinate-nucleotide pyrophosphorylase [Thermococcus onnurineus
NA1]
Length = 390
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
PG I ++R L G + + V GG+ +I+ +V AD VGSS
Sbjct: 236 TPGSRRGNFRRI-IEEVRWELDLRGYEHVKIFVSGGLNEESIREIVDI-ADAFGVGSSIA 293
Query: 202 NQKGEISYAKRLNDL 216
+ K I ++ + ++
Sbjct: 294 SAK-PIDFSLDIVEI 307
>gi|56478257|ref|YP_159846.1| nicotinate-nucleotide pyrophosphorylase [Aromatoleum aromaticum
EbN1]
gi|56314300|emb|CAI08945.1| nicotinate-nucleotide pyrophosphorylase [Aromatoleum aromaticum
EbN1]
Length = 282
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I R + A+ E V LE++ + +D M +
Sbjct: 171 HIIAAGSIARVIEQAQAIAPSNVFI---EIEVETLEELHEALDAGAKMILLDN------- 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
++ +R+A + R+ LE GGV ++++ + G D + +GS
Sbjct: 221 -MSLETMREAVRIADGRA-ELEASGGVNLEKVRAIAETGVDRISIGS 265
>gi|86359958|ref|YP_471848.1| thiamine-phosphate pyrophosphorylase [Rhizobium etli CFN 42]
gi|7388302|sp|O34294|THIE_RHIET RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|2627329|gb|AAC45975.1| thiamin phosphate pyrophosphorylase [Rhizobium etli]
gi|86284060|gb|ABC93121.1| thiamine-phosphate pyrophosphorylase protein [Rhizobium etli CFN
42]
Length = 204
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 7/118 (5%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ + D GCD I H + L I G K G++ + + + D
Sbjct: 61 DYWRLAIDEGCDFI--HLGQEDLMAADLAAIRRAGLKLGLSTHDPSELETALAAAP--DY 116
Query: 136 ILIMTVNPGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ + V P + + ++ + +G + L GG+T+ +++ GAD
Sbjct: 117 VALGPVWPTILKEMKWAPQGVERLADWRRRVG--PMPLVAIGGITAERAPLVLENGAD 172
>gi|160939041|ref|ZP_02086392.1| hypothetical protein CLOBOL_03935 [Clostridium bolteae ATCC
BAA-613]
gi|158438004|gb|EDP15764.1| hypothetical protein CLOBOL_03935 [Clostridium bolteae ATCC
BAA-613]
Length = 239
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 20/201 (9%)
Query: 28 KAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCD 87
+ GA +H +DG + S +VIR + + I S ++ + + D G
Sbjct: 41 EKGASFLHLVDLDGA-LAGYSVNEEVIRRIADTVSIPIEIGGGIRSKEA-VERMLDLGVR 98
Query: 88 IITFHPESSPHIR---RSLRTIHAMGKKTGVAINPE-TPVAILEDV--IDEIDMILIM-- 139
+ +++ H +RT GV V E V + D+ L M
Sbjct: 99 RVIIGTKAAEHPEFLRDMVRTFGEEAIVAGVDAKDGMVAVEGWEKVSSLTASDLCLTMKE 158
Query: 140 -----TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADL 193
V ++ P + + L + + + GGV+ ++K L +AG
Sbjct: 159 YGVRHIVYTDISRDGMLSG--PNVEATRKLTEETGLDIIASGGVSCMEDLKCLHEAGIRG 216
Query: 194 LVVGSSFFNQKGEISYAKRLN 214
++G + + + I A+ +
Sbjct: 217 AIIGKALY--ENRIDLAEAVR 235
>gi|156935807|ref|YP_001439723.1| thiazole synthase [Cronobacter sakazakii ATCC BAA-894]
gi|166228958|sp|A7MQQ2|THIG_ENTS8 RecName: Full=Thiazole synthase
gi|156534061|gb|ABU78887.1| hypothetical protein ESA_03683 [Cronobacter sakazakii ATCC BAA-894]
Length = 256
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 56/143 (39%), Gaps = 12/143 (8%)
Query: 84 AGCDIIT--FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILI 138
G I HP++ + + T+ A K G + P + ++E +
Sbjct: 89 LGTHWIKLEIHPDARWLLPDPIETLRAAEKLVAQGFVVLPYCGADPVLCKRLEEAGCAAV 148
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVV 196
M + G Q L + +I +I + S+ + VD G+ + ++ GAD ++V
Sbjct: 149 MPLGAPIGSNQGLQTRALLEI-----IIAQASVPVVVDAGIGAPSHAAEALEMGADAVLV 203
Query: 197 GSSFFNQKGEISYAKRLNDLKKS 219
++ + ++ A+ ++
Sbjct: 204 NTAIAVARDPVAMARAFRQAVEA 226
>gi|325295301|ref|YP_004281815.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065749|gb|ADY73756.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 356
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 43 FVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRS 102
+V N+ G++ +++S +++ + + + + I + GC+II + P I ++
Sbjct: 13 YVGNVPIGSEHPIAVQSMTNTFTED---VETTVAQIKELEKIGCEIIRV---AVPTI-KA 65
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
I + K+ + + + ++ + + +NPG G++ K+++
Sbjct: 66 AEAIKEIKKRISIPLVADIHFDYKLAILSVENGADCIRINPGNIGEKW------KVKEII 119
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQA 189
+ + +R IS+ + GV S +I V A
Sbjct: 120 SAVRERGISIRI--GVNSGSIPKEVLA 144
>gi|225181549|ref|ZP_03734991.1| Quinolinate phosphoribosyl transferase [Dethiobacter alkaliphilus
AHT 1]
gi|225167797|gb|EEG76606.1| Quinolinate phosphoribosyl transferase [Dethiobacter alkaliphilus
AHT 1]
Length = 344
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 158 IRQAKALIGK---RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+R+ +A + + + L V GG+ + +L++AG D VGS ++ I +
Sbjct: 260 VREIRARLDQAGYNHVKLFVSGGIDEERMPALMEAGTDAFGVGSFI-SRAPAIDMTMDIK 318
Query: 215 DL 216
+L
Sbjct: 319 EL 320
>gi|161525935|ref|YP_001580947.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
multivorans ATCC 17616]
gi|189349346|ref|YP_001944974.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
multivorans ATCC 17616]
gi|160343364|gb|ABX16450.1| KDPG and KHG aldolase [Burkholderia multivorans ATCC 17616]
gi|189333368|dbj|BAG42438.1| 2-dehydro-3-deoxyphosphogluconate aldolase [Burkholderia
multivorans ATCC 17616]
Length = 225
Score = 37.1 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 24/171 (14%)
Query: 46 NISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT 105
N D I +LR +++ + DAG +I
Sbjct: 58 NSPAPFDSIAALRRALPDDAIVGAGTVLRAEYVDRVQDAGGALIVM-------PHADTAV 110
Query: 106 IHAMGKKTGVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI--PKIRQA 161
I ++ G+A P TP + + D +L M + ++
Sbjct: 111 IR-RARERGLACAPGVATPTEAFAALANGAD-VLKM----------FPAEQLGTAVVKAW 158
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+A+I + + V GG+ N++ + AGA+ +GS+ + +
Sbjct: 159 RAVIDRAVPLVPV-GGIAPDNMQPFLAAGANGFGLGSALYRPGQSVDTTAA 208
>gi|160893049|ref|ZP_02073837.1| hypothetical protein CLOL250_00587 [Clostridium sp. L2-50]
gi|156865132|gb|EDO58563.1| hypothetical protein CLOL250_00587 [Clostridium sp. L2-50]
Length = 284
Score = 36.7 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ ++ ++R V +E ++ +DM+ V G L
Sbjct: 172 HIGAAGGVKEAIRMAKEYAPF----------VRKIEVEVENLDMV-KEAVEAGADIIMLD 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ +++A +I ++ +EV G VT+ NI+ L G D + G
Sbjct: 221 NMSDEMLKEAIGIIDGKA-EIEVSGNVTAENIERLKNLGVDYISSG 265
>gi|77460345|ref|YP_349852.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
fluorescens Pf0-1]
gi|77384348|gb|ABA75861.1| putative 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
[Pseudomonas fluorescens Pf0-1]
Length = 206
Score = 36.7 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 8/50 (16%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFN--------QKGEISYAKRLNDLK 217
GG+T N+++ + AG +GS F +Y L+
Sbjct: 157 GGITPDNMQAFIDAGVKGFGLGSGLFKPGMTTEQVATNAKAYVAAWKALR 206
>gi|297570233|ref|YP_003691577.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Desulfurivibrio alkaliphilus AHT2]
gi|296926148|gb|ADH86958.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Desulfurivibrio alkaliphilus AHT2]
Length = 257
Score = 36.7 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GG+T+ N + GA+ ++V S F + +RL L K+
Sbjct: 83 GGITADNAGRWLDLGAEAVIVTSYVFRDGQVLE--ERLRRLVKA 124
>gi|256827355|ref|YP_003151314.1| thiamine-phosphate diphosphorylase [Cryptobacterium curtum DSM
15641]
gi|256583498|gb|ACU94632.1| thiamine-phosphate diphosphorylase [Cryptobacterium curtum DSM
15641]
Length = 231
Score = 36.7 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRLN 214
+ + SI + GG+ + I L +GA VV S+ F + A++L
Sbjct: 164 EELYDICHAVSIPVVGIGGLNEQTIPRLAGSGACGAAVV-SAIFAAHDCKAAARQLR 219
>gi|189195198|ref|XP_001933937.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979816|gb|EDU46442.1| L-lactate dehydrogenase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 508
Score = 36.7 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 10/124 (8%)
Query: 102 SLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
+L + V +T + + I+ N G + + +
Sbjct: 340 TLPWLREHTHLPIVLKGIQTHEDAYLASLHAPHVKAIILSNHGGRALDTAPPAVHTLLEI 399
Query: 162 KALIGK--RSISLEVDGGVTSRNIKSLVQA---GADLLVVGS-SFF--NQKGEISYAKRL 213
+ + + + VDGG+ +V+A GA + VG + F G+ A+ L
Sbjct: 400 RKYCPEVFDRVEVWVDGGIKRGT--DVVKALCLGARGVGVGRAALFGLGAGGKEGVARVL 457
Query: 214 NDLK 217
LK
Sbjct: 458 EILK 461
>gi|150020172|ref|YP_001305526.1| dihydroorotate dehydrogenase family protein [Thermosipho
melanesiensis BI429]
gi|149792693|gb|ABR30141.1| dihydroorotate dehydrogenase family protein [Thermosipho
melanesiensis BI429]
Length = 271
Score = 36.7 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGS 198
+ G G L ++ I + + + R I + GG+ + + K + GA+ + +GS
Sbjct: 193 IITGGISGPLLKPISLRAIYEVRKRL--RDIYIIASGGIYSKEDAKEFLNIGANAISIGS 250
Query: 199 SFFNQK 204
+ F
Sbjct: 251 ALFKDP 256
>gi|116754539|ref|YP_843657.1| geranylgeranylglyceryl phosphate synthase-like protein
[Methanosaeta thermophila PT]
gi|121694737|sp|A0B8J3|GGGPS_METTP RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|116665990|gb|ABK15017.1| geranylgeranylglyceryl phosphate synthase [Methanosaeta thermophila
PT]
Length = 255
Score = 36.7 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
G G + + +++ + + IG L V GG+ + + LV AGADL+V G+
Sbjct: 181 EAGSGAESPVPTSM--VSAVRDAIG--DTLLVVGGGIRDAEAARKLVSAGADLIVTGTGV 236
Query: 201 FNQKGEISYAKRL 213
+ K +
Sbjct: 237 EESGDVFRFVKDI 249
>gi|269959149|ref|YP_003328938.1| inosine-5'-monophosphate dehydrogenase [Anaplasma centrale str.
Israel]
gi|269848980|gb|ACZ49624.1| inosine-5'-monophosphate dehydrogenase [Anaplasma centrale str.
Israel]
Length = 493
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----GVAINPETPVAILEDVIDEI 133
+ A D+I + H R ++TI + + N T L V +
Sbjct: 236 AEALIQAEADVIVV-DTAHGHSARVIQTIREIKALYPDAQVIGGNVATAAGALALVEAGV 294
Query: 134 DMILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLV 187
D + + + PG I I+ + + DGG+ +I +
Sbjct: 295 DAVKV-GIGPGSICTTRIVTGVGVPQFSAIKNVAEACKGTGVRVIADGGIKYSGDIAKSI 353
Query: 188 QAGADLLVVGSSFFNQKGE 206
AGAD++++GS F E
Sbjct: 354 AAGADVVMIGS-IFAGTDE 371
>gi|255519861|ref|ZP_05387098.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
J1-175]
Length = 214
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|222474805|ref|YP_002563220.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
str. Florida]
gi|222418941|gb|ACM48964.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
str. Florida]
Length = 493
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----GVAINPETPVAILEDVIDEI 133
+ A D+I + H R ++TI + + N T L V +
Sbjct: 236 AEALIQAEADVIVV-DTAHGHSARVIQTIREIKALYPDAQVIGGNVATAAGALALVEAGV 294
Query: 134 DMILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLV 187
D + + + PG I I+ + + DGG+ +I +
Sbjct: 295 DAVKV-GIGPGSICTTRIVTGVGVPQFSAIKNVAEACKGTGVRVIADGGIKYSGDIAKSI 353
Query: 188 QAGADLLVVGSSFFNQKGE 206
AGAD++++GS F E
Sbjct: 354 AAGADVVMIGS-IFAGTDE 371
>gi|116624030|ref|YP_826186.1| thiamine-phosphate pyrophosphorylase [Candidatus Solibacter
usitatus Ellin6076]
gi|116227192|gb|ABJ85901.1| thiamine-phosphate pyrophosphorylase [Candidatus Solibacter
usitatus Ellin6076]
Length = 212
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD--LLVVG 197
+R+ + LI K +++ GG+T N +++AGAD ++ G
Sbjct: 149 LRRCRPLIEKPLVAI---GGITQENALQVLEAGADSLAVIAG 187
>gi|303256540|ref|ZP_07342554.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Burkholderiales bacterium 1_1_47]
gi|302860031|gb|EFL83108.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Burkholderiales bacterium 1_1_47]
Length = 257
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQA 161
+ + + + PVA ++ + + ++ ++ G+ + IR+
Sbjct: 14 CVRLRQGDLTSNITVFNTDPVAQARHWVELGAERLHLVDLDAARSGK---PVNLSVIRKI 70
Query: 162 KALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKG 205
+ + + +EV GG+ T + ++ G D +V+G++ G
Sbjct: 71 CSEFAE-DVEIEVGGGMRTLERVGEVLDLGVDYVVIGTAAVKAPG 114
>gi|256372463|ref|YP_003110287.1| dihydroorotate dehydrogenase family protein [Acidimicrobium
ferrooxidans DSM 10331]
gi|256009047|gb|ACU54614.1| dihydroorotate dehydrogenase family protein [Acidimicrobium
ferrooxidans DSM 10331]
Length = 309
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFF 201
G G+ + + + +A + I + V GGV T+ +++ V+AGAD + +G++ F
Sbjct: 214 GLSGRAVQPIALRAVADLRAALPTVPI-IGV-GGVATADDVERFVRAGADAVQIGTALF 270
>gi|221202443|ref|ZP_03575475.1| putative 2-dehydro-3-deoxyphosphogluconate
aldolase/4-hydroxy-2-oxoglutarate aldolase [Burkholderia
multivorans CGD2M]
gi|221208098|ref|ZP_03581103.1| putative 2-dehydro-3-deoxyphosphogluconate
aldolase/4-hydroxy-2-oxoglutarate aldolase [Burkholderia
multivorans CGD2]
gi|221172001|gb|EEE04443.1| putative 2-dehydro-3-deoxyphosphogluconate
aldolase/4-hydroxy-2-oxoglutarate aldolase [Burkholderia
multivorans CGD2]
gi|221177720|gb|EEE10135.1| putative 2-dehydro-3-deoxyphosphogluconate
aldolase/4-hydroxy-2-oxoglutarate aldolase [Burkholderia
multivorans CGD2M]
Length = 225
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 24/171 (14%)
Query: 46 NISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT 105
N D I +LR +++ + DAG +I
Sbjct: 58 NSPAPFDSIAALRRALPDDAIVGAGTVLRAEYVDRVQDAGGALIVM-------PHADTAV 110
Query: 106 IHAMGKKTGVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTI--PKIRQA 161
I ++ G+A P TP + + D +L M + ++
Sbjct: 111 IR-RARERGLACAPGVATPTEAFAALANGAD-VLKM----------FPAEQLGTAVVKAW 158
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+A+I + + V GG+ N++ + AGA+ +GS+ +
Sbjct: 159 RAVIDRAVPLVPV-GGIAPDNMQPFLAAGANGFGLGSALYRPGQSADTTAA 208
>gi|255945195|ref|XP_002563365.1| Pc20g08420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588100|emb|CAP86171.1| Pc20g08420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 313
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+ K++ +EV GG+T N + V A D+L SS G + +
Sbjct: 260 REWASKKAFLIEVSGGLTEENAPAYVCADVDIL-STSSIHQGTGIVDF 306
>gi|325264743|ref|ZP_08131472.1| 1-(5-phosphoribosyl)-5-
((5'-phosphoribosylamino)methylideneamino)imidazole-4-
carboxamide isomerase [Clostridium sp. D5]
gi|324030035|gb|EGB91321.1| 1-(5-phosphoribosyl)-5-
((5'-phosphoribosylamino)methylideneamino)imidazole-4-
carboxamide isomerase [Clostridium sp. D5]
Length = 255
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + +AL +++ GG+ + N ++AGA ++V S F + + + + L L
Sbjct: 71 KKQALRALAAYPQG-MQIGGGIHAENAAEYLEAGASHVIVTSYVF--QDGVFHLENLKRL 127
>gi|321314897|ref|YP_004207184.1| transcriptional regulator TenI [Bacillus subtilis BSn5]
gi|320021171|gb|ADV96157.1| transcriptional regulator TenI [Bacillus subtilis BSn5]
Length = 205
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS----YAKRL 213
+ + + SI + GG+T ++ + QAGAD + V S F+ + Y+++L
Sbjct: 137 VSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKL 196
Query: 214 NDLK 217
+++
Sbjct: 197 KEMR 200
>gi|254825632|ref|ZP_05230633.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
J1-194]
gi|293594877|gb|EFG02638.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
J1-194]
Length = 214
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|162329870|ref|YP_001324810.2| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanococcus aeolicus Nankai-3]
Length = 391
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 12/170 (7%)
Query: 49 FGADVIRSLRSYSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESSPHIRRSLRTIH 107
+G +VI +R D L + + +A + + + L+ IH
Sbjct: 206 YGIEVIEQIREIFDGFIVADLKTLDTGRIEVRMAFEATANAVVLSGLAPKST--ILKGIH 263
Query: 108 AMGKKTGVAI----NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
K ++ N PV + + + D ++ V+ G + ++ + +K
Sbjct: 264 ECQKCGIMSYLDTINLNNPVELYNKLELKPD---VLMVHRGIDEEINKDNNKNRSSLSKE 320
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+I L V GGV++ ++ L D+LVVG + A+ +
Sbjct: 321 DFD-NNIILGVAGGVSAETVEDLKNK-YDILVVGRGITKSREPARVARSI 368
>gi|118602475|ref|YP_903690.1| inosine-5'-monophosphate dehydrogenase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567414|gb|ABL02219.1| inosine-5'-monophosphate dehydrogenase [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 486
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 10/130 (7%)
Query: 78 INIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
I+ + +AG D+I T H S + R ++T + +A N T A L D++
Sbjct: 232 IDALVEAGVDVIVIDTAHGHSQGVLDRVVKTKRKHPNLSIIAGNIATGAAAL-DLVKVGA 290
Query: 135 MILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQ 188
+ + + PG I I I + + I + DGG+ +I
Sbjct: 291 DCVKVGIGPGSICTTRIVAGVGVPQISAISEVADALKGTGIPIIADGGIRYSGDIAKAFA 350
Query: 189 AGADLLVVGS 198
AGA +++GS
Sbjct: 351 AGAYCVMLGS 360
>gi|120436847|ref|YP_862533.1| IMP dehydrogenase [Gramella forsetii KT0803]
gi|117578997|emb|CAL67466.1| IMP dehydrogenase [Gramella forsetii KT0803]
Length = 499
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 78 INIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ +AG D I T H + + L+ + + + + ++D
Sbjct: 246 AEALVNAGVDAIIIDTAHG-HTKGVVHVLKEVKNKFPDLEIVVGNIATGDAAKYLVDAGA 304
Query: 135 MILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSL 186
+ + + PG G + + A I + + DGG+ + +I
Sbjct: 305 DAVKVGIGPGSICTTRVVAGVGF--PQFSAVLEVAAAIKGSGVPVIADGGIRYTGDIPKA 362
Query: 187 VQAGADLLVVGS 198
+ AGAD +++GS
Sbjct: 363 IAAGADCVMLGS 374
>gi|70606595|ref|YP_255465.1| hypothetical protein Saci_0802 [Sulfolobus acidocaldarius DSM 639]
gi|68567243|gb|AAY80172.1| conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 228
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 34/84 (40%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ ++ G Q+ +I ++ I ++ + V GG+ IK LV ++ V
Sbjct: 145 VDIIGLHVGLDVQKKRGISIVDLKNEIMEISNLNVIISVAGGLNKDRIKELVNLPINIFV 204
Query: 196 VGSSFFNQKGEISYAKRLNDLKKS 219
VG + + + + +
Sbjct: 205 VGGAITRAHDPFKATEEIVKIINA 228
>gi|46906556|ref|YP_012945.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes
serotype 4b str. F2365]
gi|67461983|sp|Q723Y9|THIE_LISMF RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|46879821|gb|AAT03122.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes
serotype 4b str. F2365]
Length = 214
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|47091455|ref|ZP_00229252.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes str.
4b H7858]
gi|47020132|gb|EAL10868.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes str.
4b H7858]
gi|328467774|gb|EGF38820.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes 1816]
Length = 214
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|325968937|ref|YP_004245129.1| tryptophan synthase, subunit alpha [Vulcanisaeta moutnovskia
768-28]
gi|323708140|gb|ADY01627.1| tryptophan synthase, alpha subunit [Vulcanisaeta moutnovskia
768-28]
Length = 239
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIES 153
E + + + + I+ TP ++ +I + + + + G +L
Sbjct: 113 EHLDMLENYINAMREYSLRPTFFISSNTPYTLVGTLIKYEPLFIYLGLYAAT-GIKLPLY 171
Query: 154 TIPKIRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFNQ-KGEISYA 210
+R+ + L+ ++ + G + +K ++ AGAD +VVG++ ++ + +
Sbjct: 172 IERNVREVRKLVDNITL---IAGFAINTPEMVKLVISAGADAVVVGTALVDKLNDQRACV 228
Query: 211 KRLNDLK 217
+ + L+
Sbjct: 229 EFMTRLR 235
>gi|169829582|ref|YP_001699740.1| thiamine-phosphate pyrophosphorylase [Lysinibacillus sphaericus
C3-41]
gi|238688203|sp|B1HX34|THIE_LYSSC RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|168994070|gb|ACA41610.1| Thiamine-phosphate pyrophosphorylase [Lysinibacillus sphaericus
C3-41]
Length = 213
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 12/173 (6%)
Query: 50 GADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
G + R H+ D +++ G D H R
Sbjct: 49 GLAYEQFARQCQQLCQHYHVPFIVNDD-VDLAVRLGADG--VHIGQDDEQIAIARK-KMA 104
Query: 110 GKKTGVAINPETPVA-ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
+ GV+++ + + ++ D + + I Q ++QA L +
Sbjct: 105 NRILGVSVHSQEELQIAIDHHADYVGIGPIFATTSKSDAQP--PCGTNFLQQASKL--QP 160
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG---EISYAKRLNDLKK 218
++ + GG+ N + QAGAD + V S+ + +S K LN +K+
Sbjct: 161 NLPIVAIGGINGINADIVFQAGADGVAVISALCESEDIEQTVSIFKSLNRIKR 213
>gi|58579454|ref|YP_197666.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
Welgevonden]
gi|58418080|emb|CAI27284.1| Inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
Welgevonden]
Length = 485
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
IR + I + DGG+ +I + AGAD++++GS F E
Sbjct: 320 IRNVVNACRNKKIRIIADGGIKYSGDIAKSIAAGADVVMIGS-IFAGTDE 368
>gi|57239476|ref|YP_180612.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
Welgevonden]
gi|57161555|emb|CAH58482.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
Welgevonden]
Length = 485
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
IR + I + DGG+ +I + AGAD++++GS F E
Sbjct: 320 IRNVVNACRNKKIRIIADGGIKYSGDIAKSIAAGADVVMIGS-IFAGTDE 368
>gi|172058379|ref|YP_001814839.1| 3-hexulose-6-phosphate synthase [Exiguobacterium sibiricum 255-15]
gi|171990900|gb|ACB61822.1| 3-hexulose-6-phosphate synthase [Exiguobacterium sibiricum 255-15]
Length = 212
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+D I + T G+ Q + +++ + K+++ ++ V GG+ + ++ A D
Sbjct: 130 VDYICVHT---GYDLQAVGQNSFEDLATIKSVV--KNAKTAVAGGIKMETLPEVIAARPD 184
Query: 193 LLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L++VG Q + A + + + A
Sbjct: 185 LIIVGGGITGQDDKQGTASTMRRMLQEA 212
>gi|254828775|ref|ZP_05233462.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
N3-165]
gi|258601182|gb|EEW14507.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
N3-165]
Length = 214
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|89899745|ref|YP_522216.1| KDPG and KHG aldolase [Rhodoferax ferrireducens T118]
gi|89899765|ref|YP_522236.1| KDPG and KHG aldolase [Rhodoferax ferrireducens T118]
gi|89344482|gb|ABD68685.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Rhodoferax
ferrireducens T118]
gi|89344502|gb|ABD68705.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Rhodoferax
ferrireducens T118]
Length = 211
Score = 36.7 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+R +A++ + L V GG+T NI S ++AGA +GS+ + + +
Sbjct: 145 VRALRAVLPADTRLLPV-GGITPENISSYLKAGASGFGIGSALYKPGTTAAEVQA 198
>gi|331000556|ref|ZP_08324227.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]
imidazole-4-carboxamide isomerase [Parasutterella
excrementihominis YIT 11859]
gi|329571320|gb|EGG53009.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]
imidazole-4-carboxamide isomerase [Parasutterella
excrementihominis YIT 11859]
Length = 257
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQA 161
+ + + + PVA ++ + + ++ ++ G+ + IR+
Sbjct: 14 CVRLRQGDLTSNITVFNTDPVAQARHWVELGAERLHLVDLDAARSGK---PVNLSVIRKI 70
Query: 162 KALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKG 205
+ + + +EV GG+ T + ++ G D +V+G++ G
Sbjct: 71 CSEFAE-DVEIEVGGGMRTLERVGEVLDLGVDCVVIGTAAVKAPG 114
>gi|297517886|ref|ZP_06936272.1| thiazole synthase [Escherichia coli OP50]
Length = 238
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETCAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|322369955|ref|ZP_08044517.1| DNA topoisomerase [Haladaptatus paucihalophilus DX253]
gi|320550291|gb|EFW91943.1| DNA topoisomerase [Haladaptatus paucihalophilus DX253]
Length = 858
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 167 KRSISLEVDGGVTSRNIKSLVQAGADLL 194
+R LEV G+ ++ + L +AG D +
Sbjct: 800 ERKSGLEVIDGIGAKTAEKLAEAGIDTI 827
>gi|306820351|ref|ZP_07453989.1| thiamine-phosphate diphosphorylase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551572|gb|EFM39525.1| thiamine-phosphate diphosphorylase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 444
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 25/61 (40%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + + K + + I + V GG+ + I + D L + S+ +I K L
Sbjct: 159 LTTMEELKKIRQEVKIPIVVIGGINQKTIPNFKDTDIDGLAIVSAIATSDNQIESTKMLK 218
Query: 215 D 215
+
Sbjct: 219 N 219
>gi|294339486|emb|CAZ87845.1| Nicotinate-nucleotide pyrophosphorylase [carboxylating]
(Quinolinate phosphoribosyltransferase
[decarboxylating]) (QAPRTase) [Thiomonas sp. 3As]
Length = 279
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
++ ++R+A L G+R++ LEV GGV + ++++ + G D + VG
Sbjct: 218 MSLDQLREAVRLTGQRAV-LEVSGGVDLQTVRAIAETGVDRISVG 261
>gi|168206069|ref|ZP_02632074.1| FMN-dependent dehydrogenase [Clostridium perfringens E str.
JGS1987]
gi|170662420|gb|EDT15103.1| FMN-dependent dehydrogenase [Clostridium perfringens E str.
JGS1987]
Length = 340
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Query: 101 RSLRTIHAM---GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
++L I + K + TP V +D I++ Q +T
Sbjct: 192 KNLEEIKELVNSTKLPFILKGIMTPDEAELAVEAGVDAIVVSNHGGRVLDQT--PATCEV 249
Query: 158 IRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVG----SSFF--NQKGEISYA 210
+++ A + + + + VDGGV T +I ++ GAD +++G ++ F KG Y
Sbjct: 250 LKEIAARVKGK-VKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYV 308
Query: 211 KRLNDLKKSAL 221
L KSA+
Sbjct: 309 NSLKGELKSAM 319
>gi|134294706|ref|YP_001118441.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
vietnamiensis G4]
gi|134137863|gb|ABO53606.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Burkholderia
vietnamiensis G4]
Length = 225
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
+P ++ +A+I + + V GGVT N++ + AGA+ +GS+ +
Sbjct: 152 VPVVKAWRAVIDRAVPLIPV-GGVTPDNMQPFLAAGANGFGLGSALYR 198
>gi|119960931|ref|YP_948477.1| thiamine-phosphate pyrophosphorylase [Arthrobacter aurescens TC1]
gi|119947790|gb|ABM06701.1| thiamine-phosphate pyrophosphorylase [Arthrobacter aurescens TC1]
Length = 243
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ N++ +V+AGA +VV + + AK L
Sbjct: 198 IGGIDLSNVEQVVEAGASRIVVVRAITEATDPTAAAKSL 236
>gi|126179035|ref|YP_001047000.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanoculleus marisnigri JR1]
gi|166973682|sp|A3CUG8|FAEHP_METMJ RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|125861829|gb|ABN57018.1| 3-hexulose-6-phosphate synthase [Methanoculleus marisnigri JR1]
Length = 393
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDL 216
GG+ +K +AGAD+LVVG + K A+ L +L
Sbjct: 338 GGIRQGVVKDARKAGADILVVGRAITASKNIQHAAEEFLEEL 379
>gi|120603655|ref|YP_968055.1| ATPase AAA [Desulfovibrio vulgaris DP4]
gi|120563884|gb|ABM29628.1| AAA ATPase [Desulfovibrio vulgaris DP4]
Length = 674
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
++Q ++ + +++ +DGG + I+ L QA AD+LV+
Sbjct: 416 NPDVRELVKQNLHILPQSGLNI-LDGGCSREVIELLRQAKADVLVI 460
>gi|304440257|ref|ZP_07400147.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304371306|gb|EFM24922.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 483
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 21/151 (13%)
Query: 70 MISSIDSHINIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTG-VAINPETPVAI 125
+ I ++ + + D+IT H E S + ++R I +A N T V
Sbjct: 224 ITKDILDRVDALVKSKVDVITVDTAHGE-SKGVLDAIRNIKHHYPNVQLIAGNVATYVGT 282
Query: 126 LEDVIDEIDMILIMTVNPG---------FGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
+++ + + + PG G I + + + A+ + DG
Sbjct: 283 -KNLFKAGADCVKVGIGPGSICTTRVVSGVGVPQITAILEAAKAAREFGK----PIIGDG 337
Query: 177 GVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
G+ ++ + AGA+++++GS F E
Sbjct: 338 GIKYSGDVAKAIAAGANVIMIGS-LFAGTDE 367
>gi|293610666|ref|ZP_06692966.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827010|gb|EFF85375.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 260
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA + ++E + ++ +N F G + + + I +A + + +++ GG+
Sbjct: 47 DDPVATAQHWVNEGARRLHLVDLNGAFAGTPIHKPVVEAIAKA-----QPELPIQIGGGI 101
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ ++AG +++G+
Sbjct: 102 RSLETIEHYLEAGVTFVIIGT 122
>gi|169825635|ref|YP_001695793.1| pyridoxal biosynthesis lyase PdxS [Lysinibacillus sphaericus C3-41]
gi|168990123|gb|ACA37663.1| Pyridoxal biosynthesis lyase pdxS [Lysinibacillus sphaericus C3-41]
Length = 294
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 11/167 (6%)
Query: 48 SFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
+ G D I + + + HL+ S+ + D+ E++ I +
Sbjct: 95 AMGVDYIDESEVLTPADEEYHLLKSN---YTVPFVCGCRDL----GEAARRIGEGAAMLR 147
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK 167
G + G N V + V ++ ++ MT + +L+ + +R+ K L
Sbjct: 148 TKG-EPG-TGNIVEAVRHIRKVNAQVRKVVGMTEDELMTEAKLLGAPFELLREIKRLGRL 205
Query: 168 RSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ GGV T + +++ GAD + VGS F +A +
Sbjct: 206 PVVNFAA-GGVATPADAALMMELGADGVFVGSGIFKSDNPEKFAHAI 251
>gi|154150315|ref|YP_001403933.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Candidatus Methanoregula boonei 6A8]
gi|166973681|sp|A7I6C9|FAEHP_METB6 RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|153998867|gb|ABS55290.1| Orotidine 5'-phosphate decarboxylase [Methanoregula boonei 6A8]
Length = 393
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
GG+ +K ++AGAD+LVVG S K
Sbjct: 338 GGIRVEVVKDALKAGADILVVGRSITASKD 367
>gi|134045490|ref|YP_001096976.1| thiamine-phosphate pyrophosphorylase [Methanococcus maripaludis C5]
gi|166228078|sp|A4FX32|THIE_METM5 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|132663115|gb|ABO34761.1| thiamine-phosphate diphosphorylase [Methanococcus maripaludis C5]
Length = 207
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLKK 218
K + ++ + GG+ N++++++ G + VV S+ + + A+ +++L K
Sbjct: 146 LKDISKIANLPIVAIGGINHSNVENVLECGVSGVAVV-SAIVGAENILKSAENMHELIK 203
>gi|71083037|ref|YP_265756.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Candidatus Pelagibacter ubique HTCC1062]
gi|91762538|ref|ZP_01264503.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Candidatus Pelagibacter ubique HTCC1002]
gi|91206938|sp|Q4FNT6|HIS4_PELUB RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|71062150|gb|AAZ21153.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Candidatus Pelagibacter ubique HTCC1062]
gi|91718340|gb|EAS84990.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Candidatus Pelagibacter ubique HTCC1002]
Length = 239
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 161 AKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKG 205
K ++ K + +EV GGV + +I+ + AG + +++GS+ K
Sbjct: 66 IKEIVHKFDLKIEVGGGVRSIDSIEKYINAGVEKVILGSAAIKNKN 111
>gi|11498467|ref|NP_069695.1| bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
[Archaeoglobus fulgidus DSM 4304]
gi|2649745|gb|AAB90381.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-1)
[Archaeoglobus fulgidus DSM 4304]
Length = 432
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Query: 78 INIIADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTGV-AINPETPVAILEDVIDEIDM 135
+ + A +G DI+ S I ++R G + IN P + ++V +
Sbjct: 74 VEMAAKSGADIVIILALSDDDTIAEAIRAARKYGCEVMADLINVPDPASRAKEVEELG-- 131
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + V+ G Q + + K ++ SI + GG+ + + V GA +++
Sbjct: 132 VDYLNVHVGIDQQM---KGLDPLEVLKDVVDSVSIPVAAAGGLDAERAAACVSMGASIVI 188
Query: 196 VGSSFFNQKGEISYAKRLND 215
VGS+ + A+++ +
Sbjct: 189 VGSNIVKSRNVTESARKVRE 208
>gi|325123766|gb|ADY83289.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase
[Acinetobacter calcoaceticus PHEA-2]
Length = 243
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA + ++E + ++ +N F G + + + I +A + + +++ GG+
Sbjct: 30 DDPVATAQHWVNEGARRLHLVDLNGAFAGTPIHKPVVEAIAKA-----QPELPIQIGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ ++AG +++G+
Sbjct: 85 RSLETIEHYLEAGVTFVIIGT 105
>gi|296135379|ref|YP_003642621.1| nicotinate-nucleotide pyrophosphorylase [Thiomonas intermedia K12]
gi|295795501|gb|ADG30291.1| nicotinate-nucleotide pyrophosphorylase [Thiomonas intermedia K12]
Length = 279
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
++ ++R+A L G+R++ LEV GGV + ++++ + G D + VG
Sbjct: 218 MSLDQLREAVHLTGQRAV-LEVSGGVDLQTVRAIAETGVDRISVG 261
>gi|167464527|ref|ZP_02329616.1| transcriptional regulator TenI [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383457|ref|ZP_08057237.1| transcriptional regulator TenI-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321152258|gb|EFX45084.1| transcriptional regulator TenI-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 210
Score = 36.7 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 22/58 (37%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + L + SI + GG+ N+ +++AGA V S + +
Sbjct: 141 IPSLRQLCSRLSIPVLAIGGIIPGNVSEVLEAGAAGFAVMSGVWEAAEPLDAVHEYRK 198
>gi|254479156|ref|ZP_05092506.1| thiamine-phosphate pyrophosphorylase [Carboxydibrachium pacificum
DSM 12653]
gi|214034927|gb|EEB75651.1| thiamine-phosphate pyrophosphorylase [Carboxydibrachium pacificum
DSM 12653]
Length = 221
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLV-QAGADLL--VVGSSFFNQKGEISYAKRLN 214
I + + +I + GGV N ++ +G D + + G F+ E + L
Sbjct: 153 IEGVRKIKEAVNIPVVAIGGVNKTNAYEVILHSGVDGISAIAG--IFDGDIEANTKDMLR 210
Query: 215 DLKKS 219
+++++
Sbjct: 211 EIRRA 215
>gi|167045109|gb|ABZ09772.1| putative PcrB family protein [uncultured marine crenarchaeote
HF4000_APKG8I13]
Length = 256
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS-LVQAGADLLVVGSSFFNQKGEISY 209
T ++ +++ + GG+ + I + ++QAGAD LVVG+ G +
Sbjct: 191 QSITPEMVKTVRSVFD--GFLIVG-GGIKTAKIATSIIQAGADGLVVGTLLEQTGGLKKF 247
Query: 210 AKRLNDLKK 218
+ + +KK
Sbjct: 248 TEMVKSIKK 256
>gi|319790228|ref|YP_004151861.1| nicotinate-nucleotide pyrophosphorylase [Thermovibrio ammonificans
HB-1]
gi|317114730|gb|ADU97220.1| nicotinate-nucleotide pyrophosphorylase [Thermovibrio ammonificans
HB-1]
Length = 289
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 38/106 (35%), Gaps = 14/106 (13%)
Query: 92 HPESS---PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ 148
H + R + + K V + + L V+D +D++++
Sbjct: 166 HIAACGGVEEAVRRVCAVKPATAKVEVEVQNWNELRQLLPVLDLVDIVML-------DNW 218
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+E + + + S+ +E+ GG+T +K + D +
Sbjct: 219 P-LEEVPEAVELLRK---RSSVKIELSGGITLDTLKRVAALPVDYV 260
>gi|282164163|ref|YP_003356548.1| orotidine 5'-phosphate decarboxylase [Methanocella paludicola
SANAE]
gi|282156477|dbj|BAI61565.1| orotidine 5'-phosphate decarboxylase [Methanocella paludicola
SANAE]
Length = 216
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKK 218
+ + AGAD ++VG S +N + + A + L++
Sbjct: 180 ARKAIDAGADFVIVGRSIYNAEDPYAAAVNFIEQLRR 216
>gi|255321646|ref|ZP_05362803.1| thiamine-phosphate pyrophosphorylase [Campylobacter showae RM3277]
gi|255301294|gb|EET80554.1| thiamine-phosphate pyrophosphorylase [Campylobacter showae RM3277]
Length = 217
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
++ + + SI GG+ N+ + AGA
Sbjct: 173 LKFLREICENLSIKTYAIGGINFENLDKIKDAGA 206
>gi|328477748|gb|EGF47749.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Lactobacillus
rhamnosus MTCC 5462]
Length = 213
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 8/66 (12%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL--LVVGSSFFNQK 204
G E + K++ + + V GG++ +K AG D+ + G +
Sbjct: 141 GGSWDEKDLAKVKMLVDM----GFRVSVTGGLSVDTLKLF--AGVDVYTFIAGRAITQAP 194
Query: 205 GEISYA 210
A
Sbjct: 195 DPAKAA 200
>gi|313679995|ref|YP_004057734.1| tryptophan synthase, alpha chain [Oceanithermus profundus DSM
14977]
gi|313152710|gb|ADR36561.1| tryptophan synthase, alpha chain [Oceanithermus profundus DSM
14977]
Length = 257
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 63/176 (35%), Gaps = 14/176 (7%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADA-----GCDIITFHPESSPHIRRSLRTIHA 108
+ +LR +D ++ + + A G D + +R H
Sbjct: 84 VAALRQRTDKPLLLMTYVNPVFAWGPARFFAAFAEAGLDGVILPDLPPDEDPEVVRAAHD 143
Query: 109 MGKKTGVAINPETPVAILEDVIDEI-DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGK 167
G T + P + A + +V+ + ++V G + + P + + ++
Sbjct: 144 AGLATVFLLAPTSTDARIREVVRHTTGFVYTVSVTGVTGARSEMPDLAPLVGRIRSQTEL 203
Query: 168 RSISLEVDG-GVT-SRNIKSLVQAGADLLVVGSSFFNQ-KGEISYAKRLNDLKKSA 220
G GV+ + + + AD +VVGS+ + A L +++++A
Sbjct: 204 P----VAIGFGVSGAETARQAARV-ADGVVVGSALIKKLASGEDPAPLLAEIRRAA 254
>gi|302037067|ref|YP_003797389.1| nicotinate-nucleotide diphosphorylase [Candidatus Nitrospira
defluvii]
gi|300605131|emb|CBK41464.1| Nicotinate-nucleotide diphosphorylase (carboxylating) [Candidatus
Nitrospira defluvii]
Length = 293
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+RQA ALI KR++ +EV GG+T + + + QAG D + VG
Sbjct: 229 VRQAVALIKKRAL-VEVSGGITLQTVAGMAQAGVDFISVG 267
>gi|167761286|ref|ZP_02433413.1| hypothetical protein CLOSCI_03691 [Clostridium scindens ATCC 35704]
gi|167660952|gb|EDS05082.1| hypothetical protein CLOSCI_03691 [Clostridium scindens ATCC 35704]
Length = 255
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
QA + L++ GG+T+ N + AGA ++V S F
Sbjct: 73 QALKALSAYPGGLQIGGGITADNAWEYIDAGASHVIVTSYAFRD 116
>gi|169343730|ref|ZP_02864729.1| FMN-dependent dehydrogenase [Clostridium perfringens C str.
JGS1495]
gi|169298290|gb|EDS80380.1| FMN-dependent dehydrogenase [Clostridium perfringens C str.
JGS1495]
Length = 340
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Query: 101 RSLRTIHAM---GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
++L I + K + TP V +D I++ Q +T
Sbjct: 192 KNLEEIKELVNSTKLPFILKGIMTPDEAELAVEAGVDAIVVSNHGGRVLDQT--PATCEV 249
Query: 158 IRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVG----SSFF--NQKGEISYA 210
+++ A + + + + VDGGV T +I ++ GAD +++G ++ F KG Y
Sbjct: 250 LKEIAARVKGK-VKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYV 308
Query: 211 KRLNDLKKSAL 221
L KSA+
Sbjct: 309 NSLKGELKSAM 319
>gi|16082276|ref|NP_394734.1| thiamine-phosphate pyrophosphorylase [Thermoplasma acidophilum DSM
1728]
gi|13633979|sp|Q9HIQ4|THIE_THEAC RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|10640623|emb|CAC12401.1| thiamine phosphate pyrophosphorylase (yeast THI6) related protein
[Thermoplasma acidophilum]
Length = 213
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
V GG+ NI++ G D + V S+ F+ A+ L
Sbjct: 162 VIGGINISNIRTFSGYGIDGVAVVSAIFSDPDPERAARELKA 203
>gi|58696722|ref|ZP_00372267.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Drosophila simulans]
gi|58537090|gb|EAL60210.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Drosophila simulans]
Length = 494
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE--- 152
S ++ ++R I M T + E +ID + + + PG I
Sbjct: 252 SENVINTIREIKKMYPNTQLIGGNIATKEAAEALIDAGVDAVKVGIGPGSICTTRIVTGV 311
Query: 153 --STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
I+ R++ L DGGV ++ + AGAD +++GS F E
Sbjct: 312 GVPQFSAIKNVAEACRARNVRLIADGGVKYSGDVAKAIAAGADSVMIGS-IFAGTDE 367
>gi|260427242|ref|ZP_05781221.1| thiamine-phosphate pyrophosphorylase [Citreicella sp. SE45]
gi|260421734|gb|EEX14985.1| thiamine-phosphate pyrophosphorylase [Citreicella sp. SE45]
Length = 201
Score = 36.7 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+ + ++R K G S+ L GGVT + L +AGAD
Sbjct: 131 KWGPQGLDRVRSWKRRAG--SVPLVGIGGVTPERLPELFEAGAD 172
>gi|330817020|ref|YP_004360725.1| UspA domain protein [Burkholderia gladioli BSR3]
gi|327369413|gb|AEA60769.1| UspA domain protein [Burkholderia gladioli BSR3]
Length = 155
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 12/95 (12%)
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIG 166
A V +PV + V+ G G Q++ + + R A
Sbjct: 30 KASLLAISVVERAASPVDPGLPFAE---------VDTGRPGPQVVARALERARNICATYD 80
Query: 167 KRSISLEVD---GGVTSRNIKSLVQAGADLLVVGS 198
I+ VD GV + ++ + GADL+V G+
Sbjct: 81 VPCIARAVDSCGDGVAATIVRVAAEQGADLIVAGT 115
>gi|241896194|ref|ZP_04783490.1| 1,3-propanediol dehydrogenase [Weissella paramesenteroides ATCC
33313]
gi|241870555|gb|EER74306.1| 1,3-propanediol dehydrogenase [Weissella paramesenteroides ATCC
33313]
Length = 390
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 12/76 (15%)
Query: 150 LIESTIPKIRQAKALIGKRSISLEVD-------GGVTSRNIKSLVQAGADLLVVGSSFFN 202
I KI ++G + + + D GG + + SL AG D +V +N
Sbjct: 16 FGPGVISKIGDRAKMLGMKKLVIVTDKFLEGLKGGAVEQTLDSLKAAGVDYVV-----YN 70
Query: 203 QKGEISYAKRLNDLKK 218
+ + ++KK
Sbjct: 71 NVEPNPKIRNIKEVKK 86
>gi|226222945|ref|YP_002757052.1| thiamin-phosphate pyrophosphorylase (ThiE) [Listeria monocytogenes
Clip81459]
gi|254993830|ref|ZP_05276020.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
J2-064]
gi|259518424|sp|C1KZ34|THIE_LISMC RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|225875407|emb|CAS04104.1| Putative thiamin-phosphate pyrophosphorylase (ThiE) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
Length = 214
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|16078231|ref|NP_389048.1| transcriptional regulator TenI [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309008|ref|ZP_03590855.1| transcriptional regulator TenI [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313333|ref|ZP_03595138.1| transcriptional regulator TenI [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318257|ref|ZP_03599551.1| transcriptional regulator TenI [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322530|ref|ZP_03603824.1| transcriptional regulator TenI [Bacillus subtilis subsp. subtilis
str. SMY]
gi|135587|sp|P25053|TENI_BACSU RecName: Full=Regulatory protein tenI
gi|143730|gb|AAA22849.1| transcription activator [Bacillus subtilis]
gi|2633520|emb|CAB13023.1| inhibitor of thiaminase TenA [Bacillus subtilis subsp. subtilis
str. 168]
Length = 205
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS----YAKRL 213
+ + + SI + GG+T ++ + QAGAD + V S F+ + Y+++L
Sbjct: 137 VSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKL 196
Query: 214 NDLK 217
+++
Sbjct: 197 KEMR 200
>gi|323963791|gb|EGB59290.1| thiazole biosynthesis protein ThiG [Escherichia coli M863]
gi|327250461|gb|EGE62171.1| thiazole biosynthesis protein thiG [Escherichia coli STEC_7v]
Length = 256
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 55/139 (39%), Gaps = 16/139 (11%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSALAID 224
++ AK LA+D
Sbjct: 213 PVNMAKAFR------LAVD 225
>gi|294497342|ref|YP_003561042.1| thiazole biosynthesis protein ThiG [Bacillus megaterium QM B1551]
gi|295702715|ref|YP_003595790.1| thiazole biosynthesis protein ThiG [Bacillus megaterium DSM 319]
gi|294347279|gb|ADE67608.1| thiazole biosynthesis protein ThiG [Bacillus megaterium QM B1551]
gi|294800374|gb|ADF37440.1| thiazole biosynthesis protein ThiG [Bacillus megaterium DSM 319]
Length = 255
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG----FGGQQLIE 152
P +L+ + K+ G + P T +L + ++ + + + PG GQ +I
Sbjct: 108 PDPVETLKASEELLKE-GFTVLPYTSDDVL--LARRLEELGVHAIMPGASPIGSGQGIIN 164
Query: 153 STIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ +I + ++ + VD G+ T+ + ++ GAD +++ ++ K + A+
Sbjct: 165 PL-----NMRFIIEQSTVPVIVDAGIGTASDAAQAMELGADGVLLNTAVSGAKDPVKMAR 219
Query: 212 RLNDLKKSALAI 223
+ ++ A
Sbjct: 220 AMKLAIEAGRAA 231
>gi|224827325|ref|ZP_03700416.1| thiamine-phosphate pyrophosphorylase [Lutiella nitroferrum 2002]
gi|224600473|gb|EEG06665.1| thiamine-phosphate pyrophosphorylase [Lutiella nitroferrum 2002]
Length = 213
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 172 LEV----DGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKRLNDLK 217
LEV GG+T N Q G D+L V+G F+ A+ + +
Sbjct: 164 LEVPCVAIGGITPANAALAWQTGVDMLAVIG-GLFDAPAPDEAARAILAAR 213
>gi|114777703|ref|ZP_01452663.1| inosine-5'-monophosphate dehydrogenase [Mariprofundus ferrooxydans
PV-1]
gi|114551919|gb|EAU54453.1| inosine-5'-monophosphate dehydrogenase [Mariprofundus ferrooxydans
PV-1]
Length = 491
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 158 IRQAKALIGKRSISLEVDGG--VTSRNIKSLVQAGADLLVVG 197
I Q + L K ++++ GG T ++ L+ AGAD + VG
Sbjct: 259 IEQVRELKNKHGDNIQIIGGNIATGDAVRDLIDAGADAVKVG 300
>gi|87199979|ref|YP_497236.1| thiamine-phosphate pyrophosphorylase [Novosphingobium
aromaticivorans DSM 12444]
gi|87135660|gb|ABD26402.1| thiamine-phosphate diphosphorylase [Novosphingobium aromaticivorans
DSM 12444]
Length = 213
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
GG+T N L++AGAD L V ++ ++ + A + ++ +
Sbjct: 163 IGGITPANCAPLIRAGADFLAVSNAVWDGDEAANVAAFFDAIRAN 207
>gi|56416435|ref|YP_153509.1| inosine monophosphate dehydrogenase [Anaplasma marginale str. St.
Maries]
gi|56387667|gb|AAV86254.1| inosine monophosphate dehydrogenase [Anaplasma marginale str. St.
Maries]
Length = 493
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----GVAINPETPVAILEDVIDEI 133
+ A D+I + H R ++TI + + N T L V +
Sbjct: 236 AEALIQAEADVIVV-DTAHGHSARVIQTIKEIKALYPDAQVIGGNVATAAGALALVEAGV 294
Query: 134 DMILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLV 187
D + + + PG I I+ + + DGG+ +I +
Sbjct: 295 DAVKV-GIGPGSICTTRIVTGVGVPQFSAIKNVAEACKGTGVRVIADGGIKYSGDIAKSI 353
Query: 188 QAGADLLVVGSSFFNQKGE 206
AGAD++++GS F E
Sbjct: 354 AAGADVVMIGS-IFAGTDE 371
>gi|41018364|sp|Q8R806|THIE_THETN RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
Length = 214
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLV-QAGADLL--VVGSSFFNQKGEISYAKRLN 214
I + + +I + GGV N ++ +G D + + G F+ E + L
Sbjct: 146 IEGVRKIKEAVNIPVVAIGGVNKTNAYEVILHSGVDGISAIAG--IFDGDIEANTKDMLR 203
Query: 215 DLKKS 219
+++++
Sbjct: 204 EIRRA 208
>gi|313625233|gb|EFR95073.1| thiamine-phosphate pyrophosphorylase [Listeria innocua FSL J1-023]
Length = 214
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|225630007|ref|YP_002726798.1| inosine monophosphate dehydrogenase [Wolbachia sp. wRi]
gi|225591988|gb|ACN95007.1| inosine monophosphate dehydrogenase [Wolbachia sp. wRi]
Length = 497
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE--- 152
S ++ ++R I M T + E +ID + + + PG I
Sbjct: 255 SENVINTIREIKKMYPNTQLIGGNIATKEAAEALIDAGVDAVKVGIGPGSICTTRIVTGV 314
Query: 153 --STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
I+ R++ L DGGV ++ + AGAD +++GS F E
Sbjct: 315 GVPQFSAIKNVAEACRARNVRLIADGGVKYSGDVAKAIAAGADSVMIGS-IFAGTDE 370
>gi|254853412|ref|ZP_05242760.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
R2-503]
gi|300764553|ref|ZP_07074545.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
N1-017]
gi|258606782|gb|EEW19390.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
R2-503]
gi|300514660|gb|EFK41715.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
N1-017]
Length = 214
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 164 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKN 209
>gi|126643246|ref|YP_001086230.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii ATCC 17978]
gi|169794443|ref|YP_001712236.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii AYE]
gi|184159751|ref|YP_001848090.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii ACICU]
gi|213158983|ref|YP_002320981.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Acinetobacter baumannii AB0057]
gi|215482032|ref|YP_002324214.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Acinetobacter baumannii AB307-0294]
gi|239502012|ref|ZP_04661322.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii AB900]
gi|260556876|ref|ZP_05829093.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Acinetobacter baumannii ATCC
19606]
gi|301345647|ref|ZP_07226388.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii AB056]
gi|301512344|ref|ZP_07237581.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii AB058]
gi|301596169|ref|ZP_07241177.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii AB059]
gi|332851918|ref|ZP_08433804.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii 6013150]
gi|332868836|ref|ZP_08438429.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Acinetobacter baumannii 6013113]
gi|332874253|ref|ZP_08442173.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Acinetobacter baumannii 6014059]
gi|167011499|sp|A3M9N4|HIS4_ACIBT RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|226700270|sp|B7GVK1|HIS4_ACIB3 RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|226700271|sp|B7IBD1|HIS4_ACIB5 RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|226700272|sp|B2I0N7|HIS4_ACIBC RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|226700274|sp|B0V8R7|HIS4_ACIBY RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|126389130|gb|ABO13628.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase
[Acinetobacter baumannii ATCC 17978]
gi|169147370|emb|CAM85231.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase
[Acinetobacter baumannii AYE]
gi|183211345|gb|ACC58743.1| Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
(ProFAR) isomerase [Acinetobacter baumannii ACICU]
gi|213058143|gb|ACJ43045.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Acinetobacter baumannii AB0057]
gi|213988787|gb|ACJ59086.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Acinetobacter baumannii AB307-0294]
gi|260409482|gb|EEX02783.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Acinetobacter baumannii ATCC
19606]
gi|322509664|gb|ADX05118.1| hisA [Acinetobacter baumannii 1656-2]
gi|323519684|gb|ADX94065.1| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii TCDC-AB0715]
gi|332729611|gb|EGJ60948.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii 6013150]
gi|332733089|gb|EGJ64288.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Acinetobacter baumannii 6013113]
gi|332737537|gb|EGJ68444.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Acinetobacter baumannii 6014059]
Length = 243
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA + ++E + ++ +N F G + + + I +A + + +++ GG+
Sbjct: 30 DDPVATAQHWVNEGARRLHLVDLNGAFAGTPIHKPVVEAIAKA-----QPELPIQIGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ ++AG +++G+
Sbjct: 85 RSLETIEHYLEAGVTFVIIGT 105
>gi|119720219|ref|YP_920714.1| quinolinate phosphoribosyl transferase [Thermofilum pendens Hrk 5]
gi|119525339|gb|ABL78711.1| Quinolinate phosphoribosyl transferase [Thermofilum pendens Hrk 5]
Length = 112
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQ 203
GGVT+ N+ +AG D++V S+ F
Sbjct: 75 GGVTAENVADYARAGVDVVVT-SAPFRA 101
>gi|42519998|ref|NP_965913.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42409735|gb|AAS13847.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 494
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE--- 152
S ++ ++R I M T + E +ID + + + PG I
Sbjct: 252 SENVINTIREIKKMYPNTQLIGGNIATKEAAEALIDAGVDAVKVGIGPGSICTTRIVTGV 311
Query: 153 --STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
I+ R++ L DGGV ++ + AGAD +++GS F E
Sbjct: 312 GVPQFSAIKNVAEACRARNVRLIADGGVKYSGDVAKAIAAGADSVMIGS-IFAGTDE 367
>gi|323705190|ref|ZP_08116766.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323535616|gb|EGB25391.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 236
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
I I+ + G+ + +I KIR+A +EV GG+ + L G D +
Sbjct: 47 IHIVDLEGAKEGRLVNLRSIEKIRKA------FDNEIEVGGGIRNIETVSELFNLGVDYI 100
Query: 195 VVGS 198
++GS
Sbjct: 101 ILGS 104
>gi|312143074|ref|YP_003994520.1| thiamine-phosphate pyrophosphorylase [Halanaerobium sp.
'sapolanicus']
gi|311903725|gb|ADQ14166.1| thiamine-phosphate pyrophosphorylase [Halanaerobium sp.
'sapolanicus']
Length = 217
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I + + + S+ + GG+ + N +++AGAD + V S+ + A+ +
Sbjct: 152 INKLRK---ELSLPITAIGGIQTANAAEVIKAGADNIAVISALSQAEDIQKSAQEFRKI 207
>gi|302340744|ref|YP_003805950.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Spirochaeta smaragdinae DSM 11293]
gi|301637929|gb|ADK83356.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Spirochaeta smaragdinae DSM 11293]
Length = 250
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 161 AKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
+ L K EV GG+ +++ L AG D LV+G++F
Sbjct: 66 IRELCEKVEARFEVGGGIRNDHDVEELTAAGVDRLVIGTAF 106
>gi|260550792|ref|ZP_05824999.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase
[Acinetobacter sp. RUH2624]
gi|299768502|ref|YP_003730528.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter sp.
DR1]
gi|260406102|gb|EEW99587.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase
[Acinetobacter sp. RUH2624]
gi|298698590|gb|ADI89155.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter sp.
DR1]
Length = 243
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA + ++E + ++ +N F G + + + I +A + + +++ GG+
Sbjct: 30 DDPVATAQHWVNEGARRLHLVDLNGAFAGTPIHKPVVEAIAKA-----QPELPIQIGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ ++AG +++G+
Sbjct: 85 RSLETIEHYLEAGVTFVIIGT 105
>gi|218291449|ref|ZP_03495366.1| thiamine-phosphate pyrophosphorylase [Alicyclobacillus
acidocaldarius LAA1]
gi|218238705|gb|EED05924.1| thiamine-phosphate pyrophosphorylase [Alicyclobacillus
acidocaldarius LAA1]
Length = 230
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+R+ ++ SI + GG+ + N+ ++ GA + V S+ + RL +
Sbjct: 148 VRELAQVVEALSIPVVAIGGIDAANVGEVLATGASGVAVISAVVEAADPRAAVARLKE 205
>gi|58698104|ref|ZP_00373027.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535350|gb|EAL59426.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 497
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE--- 152
S ++ ++R I M T + E +ID + + + PG I
Sbjct: 255 SENVINTIREIKKMYPNTQLIGGNIATKEAAEALIDAGVDAVKVGIGPGSICTTRIVTGV 314
Query: 153 --STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
I+ R++ L DGGV ++ + AGAD +++GS F E
Sbjct: 315 GVPQFSAIKNVAEACRARNVRLIADGGVKYSGDVAKAIAAGADSVMIGS-IFAGTDE 370
>gi|224543413|ref|ZP_03683952.1| hypothetical protein CATMIT_02622 [Catenibacterium mitsuokai DSM
15897]
gi|224523668|gb|EEF92773.1| hypothetical protein CATMIT_02622 [Catenibacterium mitsuokai DSM
15897]
Length = 472
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I++ K + + + GG++ N L G D + V S+ F QK + DLK
Sbjct: 148 IKRLKEMTETVDLPMVAIGGISYDNCLLLKDTGIDGIAVISALFGQK---HIKQATIDLK 204
Query: 218 KSALAI 223
K A+
Sbjct: 205 KRVDAL 210
>gi|120401722|ref|YP_951551.1| thiamine-phosphate pyrophosphorylase [Mycobacterium vanbaalenii
PYR-1]
gi|189030577|sp|A1T2Z5|THIE_MYCVP RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|119954540|gb|ABM11545.1| thiamine-phosphate diphosphorylase [Mycobacterium vanbaalenii
PYR-1]
Length = 221
Score = 36.7 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 155 IPKIRQAKAL-IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ IR AL K ++ GG+ + + ++ AGA +VV + + A+RL
Sbjct: 157 LDLIRATAALGTDKPWFAI---GGIDAERLPEVLDAGARRVVVVRAITAADDPGAAAQRL 213
Query: 214 NDLKKSA 220
+ +A
Sbjct: 214 AGMLSAA 220
>gi|320185971|gb|EFW60719.1| Thiazole biosynthesis protein ThiG [Shigella flexneri CDC 796-83]
Length = 253
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 95 IHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 154
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 155 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 209
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 210 PVNMAKAFRLAVEAGL 225
>gi|310642552|ref|YP_003947310.1| n-(5-phosphoribosyl)anthranilate isomerase [Paenibacillus polymyxa
SC2]
gi|309247502|gb|ADO57069.1| N-(5-phosphoribosyl)anthranilate isomerase [Paenibacillus polymyxa
SC2]
Length = 228
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 31/64 (48%)
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
LE + ID +L+ T +P +GG +I +A + I L V GG+T+ N
Sbjct: 130 DELEAYVGTIDALLLDTYDPLYGGGSGKTFAWDRIPAYQAWTHQHGIPLFVAGGLTADNA 189
Query: 184 KSLV 187
+ L+
Sbjct: 190 EKLI 193
>gi|307700730|ref|ZP_07637755.1| dihydroorotate oxidase [Mobiluncus mulieris FB024-16]
gi|307613725|gb|EFN92969.1| dihydroorotate oxidase [Mobiluncus mulieris FB024-16]
Length = 342
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFN 202
G G+ L E + + + + + + V GG+T + + ++++ AGA+ LV G S F
Sbjct: 265 GVSGEPLRERALEVVTLLRKHLSPKKTIIGV-GGITTAADAQAMLDAGAN-LVEGLSAFI 322
Query: 203 QKGEISYAKRLNDLKKSA 220
+G A+ L +A
Sbjct: 323 YEGPGWAARLNRQLASAA 340
>gi|150013747|gb|ABR56198.1| Formaldehyde-activating enzyme (Fae) [Methanococcus aeolicus
Nankai-3]
Length = 399
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 12/170 (7%)
Query: 49 FGADVIRSLRSYSDSVFDCHLMISSIDSH-INIIADAGCDIITFHPESSPHIRRSLRTIH 107
+G +VI +R D L + + +A + + + L+ IH
Sbjct: 214 YGIEVIEQIREIFDGFIVADLKTLDTGRIEVRMAFEATANAVVLSGLAPKST--ILKGIH 271
Query: 108 AMGKKTGVAI----NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
K ++ N PV + + + D ++ V+ G + ++ + +K
Sbjct: 272 ECQKCGIMSYLDTINLNNPVELYNKLELKPD---VLMVHRGIDEEINKDNNKNRSSLSKE 328
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+I L V GGV++ ++ L D+LVVG + A+ +
Sbjct: 329 DFD-NNIILGVAGGVSAETVEDLKNK-YDILVVGRGITKSREPARVARSI 376
>gi|323490218|ref|ZP_08095435.1| pyridoxal biosynthesis lyase PdxS [Planococcus donghaensis MPA1U2]
gi|323396114|gb|EGA88943.1| pyridoxal biosynthesis lyase PdxS [Planococcus donghaensis MPA1U2]
Length = 294
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F +A+ +
Sbjct: 213 GGIATPADAALMMELGADGVFVGSGIFKSDNPERFARAI 251
>gi|302546129|ref|ZP_07298471.1| thiamine-phosphate diphosphorylase [Streptomyces hygroscopicus ATCC
53653]
gi|302463747|gb|EFL26840.1| thiamine-phosphate diphosphorylase [Streptomyces himastatinicus
ATCC 53653]
Length = 228
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 23/46 (50%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG+ + N+ +++AGA +VV + + + + L ++A
Sbjct: 181 IGGIDASNLDEVLEAGARRIVVVRAITEAEDPAAATESLAKRVRAA 226
>gi|294340966|emb|CAZ89361.1| putative Thiamine-phosphate pyrophosphorylase (TMP
pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
synthase) (ThiE) [Thiomonas sp. 3As]
Length = 220
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+A+ + L GG+ N ++ AGAD L
Sbjct: 156 LRAMRAFTDLPLIAIGGIDLNNAAQVLAAGADGL 189
>gi|224065182|ref|XP_002301704.1| predicted protein [Populus trichocarpa]
gi|222843430|gb|EEE80977.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ K +AL L+V GG+ N + ++ GA ++V S FN G++ +RL
Sbjct: 79 LSKAAAVEALRAYPGG-LQVGGGINVNNALNYIEEGASHVIVTSYVFN-NGQMD-LERLK 135
Query: 215 DLKK 218
DL +
Sbjct: 136 DLVR 139
>gi|327300617|ref|XP_003235001.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Trichophyton rubrum CBS 118892]
gi|326462353|gb|EGD87806.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Trichophyton rubrum CBS 118892]
Length = 266
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I KA + + GG+T N + + AGA+ LVV S F RL +
Sbjct: 69 IEALKAWPD--GLHIA--GGITDNNAQYWLDAGAEKLVVTSYLF--PDARFSIDRLQSIL 122
Query: 218 KS 219
+
Sbjct: 123 AA 124
>gi|317491371|ref|ZP_07949807.1| histidine biosynthesis protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920918|gb|EFV42241.1| histidine biosynthesis protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 245
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TS 180
P+ L+D + +L + G + +I + L+ S+ ++V GG+ ++
Sbjct: 31 PLPRLQDYQQQGGQVLHLVDLTGAK-----DPAARQIPLLRKLLAGISVPVQVGGGIRSA 85
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEI 207
++ +L++AGA +VVGS+ Q E+
Sbjct: 86 EDVAALIEAGASRVVVGSTAVRQPEEV 112
>gi|311745337|ref|ZP_07719122.1| geranylgeranylglyceryl phosphate synthase [Algoriphagus sp. PR1]
gi|311302367|gb|EAZ82095.2| geranylgeranylglyceryl phosphate synthase [Algoriphagus sp. PR1]
Length = 237
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
GG+ + ++ +AGADL+V+G+S ++ S L ++
Sbjct: 188 GGIDSQEKVREAYEAGADLVVLGNSIEKDPDFLAEVLNFKAWYNSTLNVN 237
>gi|251809935|ref|ZP_04824408.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875033|ref|ZP_06283908.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus epidermidis SK135]
gi|251806545|gb|EES59202.1| pyridoxine (vitamin B6) biosynthesis protein [Staphylococcus
epidermidis BCM-HMP0060]
gi|281296361|gb|EFA88880.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus epidermidis SK135]
gi|329737795|gb|EGG74033.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
[Staphylococcus epidermidis VCU028]
Length = 295
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T ++ +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPQDAALMMELGADGVFVGSGIFKSEDSEKFAKAI 252
>gi|227875534|ref|ZP_03993674.1| possible dihydroorotate oxidase [Mobiluncus mulieris ATCC 35243]
gi|227843870|gb|EEJ54039.1| possible dihydroorotate oxidase [Mobiluncus mulieris ATCC 35243]
Length = 342
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFN 202
G G+ L E + + + + + + V GG+T + + ++++ AGA+ LV G S F
Sbjct: 265 GVSGEPLRERALEVVTLLRKHLSPKKTIIGV-GGITTAADAQAMLDAGAN-LVEGLSAFI 322
Query: 203 QKGEISYAKRLNDLKKSA 220
+G A+ L +A
Sbjct: 323 YEGPGWAARLNRQLASAA 340
>gi|220904990|ref|YP_002480302.1| modD protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219869289|gb|ACL49624.1| modD protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 290
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 28/98 (28%), Gaps = 45/98 (45%)
Query: 143 PGFGGQQLIESTIPKIRQAKALIGKRSISLEVD--------------------------- 175
PG +E+ + R +A + +++I++EVD
Sbjct: 172 PGSENLSALEALARQTRDLRARMPEKNIAIEVDCLDDALLAAGAGLDIIQCEKFSCQDLA 231
Query: 176 ------------------GGVTSRNIKSLVQAGADLLV 195
GG+ N G D+LV
Sbjct: 232 ATVGALKSARPDILILAAGGINGDNAAEYAATGVDVLV 269
>gi|20808608|ref|NP_623779.1| thiamine monophosphate synthase [Thermoanaerobacter tengcongensis
MB4]
gi|20517238|gb|AAM25383.1| Thiamine monophosphate synthase [Thermoanaerobacter tengcongensis
MB4]
Length = 195
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLV-QAGADLL--VVGSSFFNQKGEISYAKRLN 214
I + + +I + GGV N ++ +G D + + G F+ E + L
Sbjct: 127 IEGVRKIKEAVNIPVVAIGGVNKTNAYEVILHSGVDGISAIAG--IFDGDIEANTKDMLR 184
Query: 215 DLKKS 219
+++++
Sbjct: 185 EIRRA 189
>gi|257067114|ref|YP_003153370.1| thiamine-phosphate pyrophosphorylase [Anaerococcus prevotii DSM
20548]
gi|256798994|gb|ACV29649.1| thiamine-phosphate pyrophosphorylase [Anaerococcus prevotii DSM
20548]
Length = 205
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ K + K SI + GG+ NI L +GAD + V + + K+L +
Sbjct: 141 VETFKEIKNKVSIDVYAIGGLNIENIDVLKSSGADGICVVRAIMDSPNVYEDTKKLKE 198
>gi|150390939|ref|YP_001320988.1| response regulator receiver protein [Alkaliphilus metalliredigens
QYMF]
gi|149950801|gb|ABR49329.1| response regulator receiver protein [Alkaliphilus metalliredigens
QYMF]
Length = 222
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 60/161 (37%), Gaps = 24/161 (14%)
Query: 49 FGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
AD I ++ ++ H +++S D + + G + + S+ +
Sbjct: 51 INADAIWAVYPFTPQPTINHAIMTSSD--VPVFCGVGGGVTSGQRSSNLALHA------E 102
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGF---------GGQQLIESTIPK-- 157
GV +N TP ++ + + ID+ + +TV G ++ K
Sbjct: 103 FQGAIGVVLNAPTPNDTVKLMKELIDIPVTVTVVSSNLKKLEERLAAGVDILNVAAGKDT 162
Query: 158 ---IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + + + + + GG NIK + AGA+ ++
Sbjct: 163 AKIVAEIRKHFEQ--VPIFATGGADEENIKRTIDAGANAII 201
>gi|71909512|ref|YP_287099.1| thiamine monophosphate synthase [Dechloromonas aromatica RCB]
gi|123626343|sp|Q478V2|THIE_DECAR RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|71849133|gb|AAZ48629.1| thiamine-phosphate diphosphorylase [Dechloromonas aromatica RCB]
Length = 211
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG+T N L+ AGADLL V + F+ ++ A L + A
Sbjct: 164 IGGITLDNAPPLIVAGADLLAVITDLFSAPDIMARAAAYQRLFEEA 209
>gi|257461438|ref|ZP_05626534.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Campylobacter gracilis RM3268]
gi|257441161|gb|EEV16308.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Campylobacter gracilis RM3268]
Length = 235
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADL 193
+ ++ ++ F G+ + I +I + + +EV GG+ IK + G D
Sbjct: 46 WLHLVDLDGAFAGEAVNFKAIERI------VKSTRLRVEVGGGIRDEARIKEYLNLGVDR 99
Query: 194 LVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
++GS+ + + +R+ L + + ID
Sbjct: 100 FILGSAALKNRD---FVRRMTKLYRIVVGID 127
>gi|188590495|ref|YP_001921441.1| dihydropyrimidine dehydrogenase [Clostridium botulinum E3 str.
Alaska E43]
gi|188500776|gb|ACD53912.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E3 str. Alaska E43]
Length = 412
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 41/199 (20%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------ 53
P+ +V SI+ + + +T+AGA I + P ++ G+DV
Sbjct: 101 PTKIVVASIMGENEKEWEDLAKLVTEAGADMIECNFS----CPQMTSHEMGSDVGQNPEL 156
Query: 54 ----IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
+ R ++ + + D + IA E ++ TI ++
Sbjct: 157 VKKYCEATRRGTNLPILAKMTPNIGDMSVPAIAS---------MEGGATGLATINTIKSI 207
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
G+ IN T ++ + G+ G+ + + I + +
Sbjct: 208 T---GIDINSMTAK----------PVVNAKSSVSGYSGKAVKPIALRFIYELAKNEKLKG 254
Query: 170 ISLEVDGGVTSRNIKSLVQ 188
+ + GG+ + ++
Sbjct: 255 VPISGIGGI--ETWEDALE 271
>gi|85717002|ref|ZP_01047965.1| orotidine 5'-phosphate decarboxylase [Nitrobacter sp. Nb-311A]
gi|85696204|gb|EAQ34099.1| orotidine 5'-phosphate decarboxylase [Nitrobacter sp. Nb-311A]
Length = 240
Score = 36.7 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
V+AGAD LV+G + + A+ + +AL D
Sbjct: 201 EAVRAGADYLVLGRPIYAADNPKAAAQAIIQEMAAALRPD 240
>gi|295703653|ref|YP_003596728.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium DSM 319]
gi|294801312|gb|ADF38378.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium DSM 319]
Length = 213
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+D I + T G+ Q E+ +++ K ++ ++ V GG+ + +VQ+ D
Sbjct: 128 VDYICVHT---GYDLQAEGETPFEQLQTIKRVV--KNAKTAVAGGIKMNTLPEVVQSQPD 182
Query: 193 LLVVGSSFFNQKGEISYAKRLNDLKKSA 220
L++VG ++K + + A+ + + K A
Sbjct: 183 LVIVGGGITSEKDKRNVAEEMKKVVKQA 210
>gi|237801129|ref|ZP_04589590.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331023986|gb|EGI04043.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 211
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 21/134 (15%)
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILED 128
+ + + + + DAG +I R + A K G+ ++P TP
Sbjct: 69 VLNPEQ-VTQVKDAGGQVIVM-------PHSDARVLRAA-KAAGLFLSPGVATPTEAFAA 119
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ + D++ + F +Q+ + ++ A++ K +I L V GG++ N+K +
Sbjct: 120 LAEGADVLKL------FPAEQMSPAV---VKAWLAVLPKGTILLPV-GGISPDNMKVFLD 169
Query: 189 AGADLLVVGSSFFN 202
AG +GS F
Sbjct: 170 AGVKGFGLGSGLFK 183
>gi|225677137|ref|ZP_03788136.1| inosine monophosphate dehydrogenase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590804|gb|EEH12032.1| inosine monophosphate dehydrogenase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 497
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 7/117 (5%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIE--- 152
S ++ ++R I M T + E +ID + + + PG I
Sbjct: 255 SENVINTIREIKKMYPNTQLIGGNIATKEAAEALIDAGVDAVKVGIGPGSICTTRIVTGV 314
Query: 153 --STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
I+ R++ L DGGV ++ + AGAD +++GS F E
Sbjct: 315 GVPQFSAIKNVAEACRARNVRLIADGGVKYSGDVAKAIAAGADSVMIGS-IFAGTDE 370
>gi|22299256|ref|NP_682503.1| nicotinate-nucleotide pyrophosphorylase [Thermosynechococcus
elongatus BP-1]
gi|22295438|dbj|BAC09265.1| nicotinate-nucleotide pyrophosphorylase [Thermosynechococcus
elongatus BP-1]
Length = 288
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 9/103 (8%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I ++ + +AI ET + ++++ L + V+ I
Sbjct: 176 HIVAAGGITAAVEKVRQASPFP-LAIEVET------ETLEQVREALFLGVDVIMLDNMPI 228
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ +A I +E G +T ++ + G D +
Sbjct: 229 PEMTQAVAMIRA--EAPHIKIEASGNITLETLRPVALTGVDYI 269
>gi|260891937|ref|YP_003238034.1| pyridoxine biosynthesis protein [Ammonifex degensii KC4]
gi|260864078|gb|ACX51184.1| pyridoxine biosynthesis protein [Ammonifex degensii KC4]
Length = 293
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 13/69 (18%)
Query: 158 IRQAKALIGKRSISLEVD------------GGV-TSRNIKSLVQAGADLLVVGSSFFNQK 204
++ AK + + LEV GG+ T + ++Q GAD + VGS F K
Sbjct: 182 MKAAKEMGAPYELVLEVAELGRLPVVNFAAGGIATPADAALMMQLGADGIFVGSGIFKSK 241
Query: 205 GEISYAKRL 213
I A+ +
Sbjct: 242 DPIKRARAI 250
>gi|320587677|gb|EFX00152.1| 5-profar isomerase [Grosmannia clavigera kw1407]
Length = 283
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
+ + L++ GG+ N + AGAD ++V S F
Sbjct: 71 REAVAAWPGGLQIGGGIRDSNAAEWIAAGADKVIVTSYLF 110
>gi|254039248|ref|ZP_04873297.1| thiamin biosynthesis [Escherichia sp. 1_1_43]
gi|226838483|gb|EEH70513.1| thiamin biosynthesis [Escherichia sp. 1_1_43]
Length = 342
Score = 36.7 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 184 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 243
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 244 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 298
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 299 PVNMAKAFRLAVEAGL 314
>gi|331002135|ref|ZP_08325654.1| thiamine-phosphate pyrophosphorylase [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411229|gb|EGG90645.1| thiamine-phosphate pyrophosphorylase [Lachnospiraceae oral taxon
107 str. F0167]
Length = 211
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ K++ SI GG+ NI L + D + V S+ F K S K L+ L K
Sbjct: 149 EKLKSICEAVSIPKVAIGGINRDNILKLKGSKIDGVAVISAIFGAKDIGSAIKELDILIK 208
>gi|225181526|ref|ZP_03734968.1| inosine-5'-monophosphate dehydrogenase [Dethiobacter alkaliphilus
AHT 1]
gi|225167774|gb|EEG76583.1| inosine-5'-monophosphate dehydrogenase [Dethiobacter alkaliphilus
AHT 1]
Length = 506
Score = 36.7 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 14/131 (10%)
Query: 79 NIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ +AG D++ T H S + +++ TI + V + +D+I+
Sbjct: 256 KALVEAGVDVLVIDTAHG-HSAGVLKTVNTIKNTYPEVNVVAGNVATGSGTKDLIEAGAD 314
Query: 136 ILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLV 187
+ + V PG G + I I A + + DGG+ +I +
Sbjct: 315 AVKVGVGPGSICTTRVVAGIGV--PQITAIYDAANAAAAYGVPIVADGGIKFSGDITKAI 372
Query: 188 QAGADLLVVGS 198
AGAD+++VGS
Sbjct: 373 GAGADVIMVGS 383
>gi|251777769|ref|ZP_04820689.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243082084|gb|EES47974.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 412
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 26/199 (13%), Positives = 64/199 (32%), Gaps = 41/199 (20%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------ 53
P+ +V SI+ + + +T+AGA I + P ++ G+DV
Sbjct: 101 PTKIVVASIMGENEKEWEDLAKLVTEAGADMIECNFS----CPQMTSHEMGSDVGQNPEL 156
Query: 54 ----IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
+ R ++ + + D + IA ++ + +S+ I
Sbjct: 157 VKKYCEATRRGTNLPILAKMTPNIGDMSVPAIASMEGGATGL---ATINTIKSITGIDIN 213
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
+N ++ V+ G+ G+ + + I + +
Sbjct: 214 SMTAKPVVNAKSSVS-------------------GYSGKAVKPIALRFIYELAKNEKLKG 254
Query: 170 ISLEVDGGVTSRNIKSLVQ 188
+ + GG+ + ++
Sbjct: 255 VPISGIGGI--ETWEDALE 271
>gi|221211485|ref|ZP_03584464.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
multivorans CGD1]
gi|221168846|gb|EEE01314.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
multivorans CGD1]
Length = 293
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N PV I + + ++D L G L T+ +R+A + +++ L
Sbjct: 197 AAFALNAGVPVQIEVETLAQLDTALAH----GAQSVLLDNFTLDMMREAVRVAAGKAV-L 251
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 252 EVSGGVNFDTVRTFAETGVD 271
>gi|57640153|ref|YP_182631.1| nicotinate-nucleotide pyrophosphorylase [Thermococcus kodakarensis
KOD1]
gi|57158477|dbj|BAD84407.1| Nicotinate-nucleotide pyrophosphorylase [Thermococcus kodakarensis
KOD1]
Length = 277
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I K + + +EV GG+T NI + D++ +G
Sbjct: 219 IEALKREGLREKVKIEVSGGITPENITEYAKLDVDVISLG 258
>gi|116072805|ref|ZP_01470071.1| N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus sp.
BL107]
gi|116064692|gb|EAU70452.1| N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus sp.
BL107]
Length = 229
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSF 200
GG+ + +S + AGAD +VVG++
Sbjct: 188 GGIASPGTARSALDAGADNVVVGTAI 213
>gi|292490223|ref|YP_003525662.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Nitrosococcus halophilus Nc4]
gi|291578818|gb|ADE13275.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Nitrosococcus halophilus Nc4]
Length = 246
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA+ + I+ + ++ ++ F GQ + I I QA + ++V GG+
Sbjct: 30 DDPVAMALHWAEAGIERLHLVDLDGAFAGQPVNADIIYNIAQAL-----PDMDIQVGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
I++ + AG +++G+
Sbjct: 85 RDGDTIQTYLDAGVRYVIIGT 105
>gi|269794866|ref|YP_003314321.1| dihydroorotate oxidase A [Sanguibacter keddieii DSM 10542]
gi|269097051|gb|ACZ21487.1| dihydroorotate oxidase A [Sanguibacter keddieii DSM 10542]
Length = 342
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGAD 192
G G+ L+ + + + ++ +G R + + V GG+T + + ++ + AGAD
Sbjct: 269 GLSGRPLLPRGLEVVARLRSRLGARPVIIGV-GGITTAADAQAYLDAGAD 317
>gi|116207260|ref|XP_001229439.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Chaetomium globosum CBS 148.51]
gi|88183520|gb|EAQ90988.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Chaetomium globosum CBS 148.51]
Length = 275
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
A+ + +L+V GG+ N K + AGA+ +++ S F
Sbjct: 67 AAREALAAWPGALQVGGGINDTNAKEWIDAGAEKVIITSFLF 108
>gi|309791115|ref|ZP_07685648.1| glycosyl transferase family 2 [Oscillochloris trichoides DG6]
gi|308226813|gb|EFO80508.1| glycosyl transferase family 2 [Oscillochloris trichoides DG6]
Length = 228
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
I + L + I + VDGG + + +AGA ++
Sbjct: 21 IGALRRLNPEAEI-IVVDGGSDDQTVALAREAGARVV 56
>gi|256826927|ref|YP_003150886.1| hypothetical protein Ccur_04820 [Cryptobacterium curtum DSM 15641]
gi|256583070|gb|ACU94204.1| uncharacterized conserved protein [Cryptobacterium curtum DSM
15641]
Length = 256
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 18/99 (18%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
A +TP + E ++ + D +L MT G I T+P++ + +++ ++ V
Sbjct: 154 CASPLDTPDSACEYILPQQDYVL-MT------GTTFINKTMPRLLEL----SQKATTIVV 202
Query: 175 DGGVTSRNIKS--LVQAGADLLVVGSSFFNQKGEISYAK 211
I S L +AGA + GS +++ + K
Sbjct: 203 ----GPSAIPSVVLAEAGAQAI-AGSVVVDKEPAKASIK 236
>gi|218778807|ref|YP_002430125.1| thiamine-phosphate pyrophosphorylase [Desulfatibacillum
alkenivorans AK-01]
gi|218760191|gb|ACL02657.1| thiamine-phosphate pyrophosphorylase [Desulfatibacillum
alkenivorans AK-01]
Length = 212
Score = 36.3 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + + + + I++ G V N +++AGAD L V S+ +Q ++ L
Sbjct: 148 LEGLAEIRTITKTPLIAI---GSVNLSNAAEVIRAGADGLAVVSAICSQPDIEQASRNLA 204
Query: 215 DLKKSA 220
+ A
Sbjct: 205 AAIQKA 210
>gi|330941576|gb|EGH44360.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 282
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + +DE+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLDELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ SLE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLDDMREAVRLTAGRA-SLEASGGINDDTLRVIAETGVDYI 262
>gi|325279352|ref|YP_004251894.1| Thiazole synthase [Odoribacter splanchnicus DSM 20712]
gi|324311161|gb|ADY31714.1| Thiazole synthase [Odoribacter splanchnicus DSM 20712]
Length = 255
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 10/129 (7%)
Query: 91 FHPES---SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG- 146
HP+ P +L+ + K + + +L +++ +M + G
Sbjct: 100 IHPDPRYLLPDPVETLKATEELAKLGFIVLPYCQADPVLCKRLEDAGAATVMPLGAPIGT 159
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I + +I + VD G+ + ++ GAD ++V ++
Sbjct: 160 NQGLQTREF-----LRIIIEQSNIPVVVDAGIGAPSHAAEAMELGADAVLVNTAIAVAGN 214
Query: 206 EISYAKRLN 214
+ AK
Sbjct: 215 PVEMAKAFK 223
>gi|319655039|ref|ZP_08009109.1| pyridoxal biosynthesis lyase pdxS [Bacillus sp. 2_A_57_CT2]
gi|317393263|gb|EFV74031.1| pyridoxal biosynthesis lyase pdxS [Bacillus sp. 2_A_57_CT2]
Length = 293
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +A+ +
Sbjct: 212 GGVATPADAALMMELGADGVFVGSGIFKSENPAKFARAI 250
>gi|294627131|ref|ZP_06705719.1| thiamine-phosphate pyrophosphorylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667404|ref|ZP_06732622.1| thiamine-phosphate pyrophosphorylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292598564|gb|EFF42713.1| thiamine-phosphate pyrophosphorylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602845|gb|EFF46278.1| thiamine-phosphate pyrophosphorylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 233
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 20/56 (35%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ GG+ + +L AGADL+ V S + ++ + D
Sbjct: 176 ALLQQAAGLDLPRVAIGGIAPAQVPALASAGADLIAVVSGVYAAPDPVAAVQAYRD 231
>gi|170770123|ref|ZP_02904576.1| thiazole biosynthesis protein ThiG [Escherichia albertii TW07627]
gi|170121005|gb|EDS89936.1| thiazole biosynthesis protein ThiG [Escherichia albertii TW07627]
Length = 256
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILE-DVIDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKHLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + +I + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATIPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|241589823|ref|YP_002979848.1| nicotinate-nucleotide pyrophosphorylase [Ralstonia pickettii 12D]
gi|241664364|ref|YP_002982724.1| nicotinate-nucleotide pyrophosphorylase [Ralstonia pickettii 12D]
gi|309782965|ref|ZP_07677685.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Ralstonia
sp. 5_7_47FAA]
gi|240866391|gb|ACS64052.1| nicotinate-nucleotide pyrophosphorylase [Ralstonia pickettii 12D]
gi|240868535|gb|ACS66194.1| nicotinate-nucleotide pyrophosphorylase [Ralstonia pickettii 12D]
gi|308918389|gb|EFP64066.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Ralstonia
sp. 5_7_47FAA]
Length = 281
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 105 TIHAMGKKTGVAINPET----------PVAILEDVIDEIDMILIMTVNPGFGGQQLIEST 154
I G I P PV + + +DE+ L + G L +
Sbjct: 164 LIKENHVAAGGGIAPTVRAAQVIGAGVPVQVEVETLDELAQAL----SADAGAILLDNFS 219
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ ++R+A + R+ SLEV GGVT ++++ + G D + VG
Sbjct: 220 LEQMREAVRINNGRA-SLEVSGGVTKETLRAIAETGVDRISVG 261
>gi|255023780|ref|ZP_05295766.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
J1-208]
Length = 185
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 135 LPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCHSVIKQLKN 180
>gi|167464522|ref|ZP_02329611.1| thiamine-phosphate pyrophosphorylase [Paenibacillus larvae subsp.
larvae BRL-230010]
Length = 232
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
IR+ + + + GG+T+ +++AGAD + V SS A ++ ++
Sbjct: 165 IRRLRG--EGIFMPIVGIGGITASRSGDVIRAGADGVAVISSITGSADPEKEAGQILEMV 222
Query: 218 KSA 220
A
Sbjct: 223 HQA 225
>gi|161523970|ref|YP_001578982.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia multivorans
ATCC 17616]
gi|189351269|ref|YP_001946897.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia multivorans
ATCC 17616]
gi|160341399|gb|ABX14485.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia multivorans
ATCC 17616]
gi|189335291|dbj|BAG44361.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia multivorans
ATCC 17616]
Length = 293
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N PV I + + ++D L G L T+ +R+A + +++ L
Sbjct: 197 AAFALNAGVPVQIEVETLAQLDTALAH----GAQSVLLDNFTLDMMREAVRVAAGKAV-L 251
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 252 EVSGGVNFDTVRTFAETGVD 271
>gi|11498119|ref|NP_069344.1| pyridoxine biosynthesis protein [Archaeoglobus fulgidus DSM 4304]
gi|3123067|sp|O29742|PDXS_ARCFU RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|2650109|gb|AAB90722.1| ethylene-inducible protein [Archaeoglobus fulgidus DSM 4304]
Length = 336
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F YAK +
Sbjct: 255 GGVATPADAALMMQLGADGVFVGSGIFKSSNPPEYAKAI 293
>gi|329117554|ref|ZP_08246271.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Streptococcus parauberis NCFD 2020]
gi|326907959|gb|EGE54873.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Streptococcus parauberis NCFD 2020]
Length = 216
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
GGV + NIK ++AGA ++ GSS ++ +
Sbjct: 161 GGVNADNIKDWMKAGATIVSAGSSLYSIGKNDDF 194
>gi|301155780|emb|CBW15248.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 225
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+D ++++ + D I H S +++R G +IN I E+ + EI
Sbjct: 82 VDDNVDLALEIEADGI--HVGQSDTPVKTIRARTHKPFIIGWSINRLDEAKIGEE-LSEI 138
Query: 134 DMILIMTVNPGFGGQQLIEST-IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
D I + P + + + I+ + + + GGV ++K+L + GAD
Sbjct: 139 DYFGIGPIFPTQSKENPKPTLGMAFIQTLRKAGITKPL--VAIGGVKLEHVKTLRKYGAD 196
Query: 193 LLVVGSSFFNQKGEISYAKRLND 215
+ V ++ K + K L +
Sbjct: 197 GIAVITAISQAKDIKASTKALKE 219
>gi|290473980|ref|YP_003466854.1| N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-
imidazolecarboxamide isomerase [Xenorhabdus bovienii
SS-2004]
gi|289173287|emb|CBJ80062.1| N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-
imidazolecarboxamide isomerase [Xenorhabdus bovienii
SS-2004]
Length = 245
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 161 AKALIGKRSISLEVDGGVTSRN-IKSLVQAGADLLVVGS 198
+ L+ S+ ++V GG+ S N IKSL++AGA +V+GS
Sbjct: 65 LRELLAGVSVPVQVGGGIRSENDIKSLLEAGASRVVIGS 103
>gi|223043924|ref|ZP_03613965.1| thiamine-phosphate pyrophosphorylase [Staphylococcus capitis SK14]
gi|222442639|gb|EEE48743.1| thiamine-phosphate pyrophosphorylase [Staphylococcus capitis SK14]
Length = 212
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I + + +G+ + + GG+ NI+ + +A AD + V S+ K K
Sbjct: 154 ITKLRDYVGE--LPIVAIGGINETNIEPIAEACADGVSVISAITRSKNIDKTVKHFRK 209
>gi|126666497|ref|ZP_01737475.1| thiamine-phosphate pyrophosphorylase [Marinobacter sp. ELB17]
gi|126628885|gb|EAZ99504.1| thiamine-phosphate pyrophosphorylase [Marinobacter sp. ELB17]
Length = 220
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 175 DGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKRLNDL 216
GG+T N + L+QAGADLL V G F + AKR +
Sbjct: 165 IGGITLGNAEPLIQAGADLLAVAG-GLF-STDMDATAKRAREF 205
>gi|330890682|gb|EGH23343.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
mori str. 301020]
Length = 282
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLSELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ LE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLDDMREAVRLTAGRA-RLEASGGINDDTLRVIAETGVDYI 262
>gi|320326073|gb|EFW82130.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
glycinea str. B076]
Length = 282
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLSELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ LE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLEDMREAVRLTAGRA-RLEASGGINDDTLRVIAETGVDYI 262
>gi|317127492|ref|YP_004093774.1| thiamine monophosphate synthase [Bacillus cellulosilyticus DSM
2522]
gi|315472440|gb|ADU29043.1| thiamine monophosphate synthase [Bacillus cellulosilyticus DSM
2522]
Length = 199
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
IRQ +AL+ + SI + GG+T N++S++ AGA + + S + +S K
Sbjct: 140 IRQLEALVNEVSIPVIAIGGITPFNVESVMSAGARGVAIMSGILEAEDPLSMIK 193
>gi|221213213|ref|ZP_03586188.1| putative 2-(S)-hydroxypropyl-CoM dehydrogenase [Burkholderia
multivorans CGD1]
gi|221166665|gb|EED99136.1| putative 2-(S)-hydroxypropyl-CoM dehydrogenase [Burkholderia
multivorans CGD1]
Length = 484
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 25/149 (16%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEID 134
+++ + DAG +I I ++ G+A P TP + + D
Sbjct: 89 YVDRVQDAGGALIVM-------PHADTAVIR-RARERGLACAPGVATPTEAFAALANGAD 140
Query: 135 MILIMTVNPGFGGQQLIESTI--PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
+L M + ++ +A+I + + V GG+ N++ + AGA+
Sbjct: 141 -VLKM----------FPAEQLGTAVVKAWRAVIDRAVPLVPV-GGIAPDNMQPFLAAGAN 188
Query: 193 LLVVGSSFFNQKGEIS-YAKRLNDLKKSA 220
+GS+ + A + +A
Sbjct: 189 GFGLGSALYRPGQSADTTAAHARAFRPAA 217
>gi|110617389|gb|ABF06056.1| thiamin biosynthesis, thiazole moiety [Shigella flexneri 5 str.
8401]
Length = 342
Score = 36.3 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 184 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 243
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 244 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 298
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 299 PVNMAKAFRLAVEAGL 314
>gi|291288882|ref|YP_003505698.1| thiamine-phosphate pyrophosphorylase [Denitrovibrio acetiphilus DSM
12809]
gi|290886042|gb|ADD69742.1| thiamine-phosphate pyrophosphorylase [Denitrovibrio acetiphilus DSM
12809]
Length = 205
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I++ A GK S+++ GG+T N+ L +G + V S+ + AK L D
Sbjct: 146 IKELVAAAGKPSVAI---GGITGENVDQLSNSGVSGVAVSSAICAAEDPYMAAKMLRD 200
>gi|118586278|ref|ZP_01543734.1| pyridoxine biosynthesis lyase [Oenococcus oeni ATCC BAA-1163]
gi|118433294|gb|EAV40004.1| pyridoxine biosynthesis lyase [Oenococcus oeni ATCC BAA-1163]
Length = 294
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +AK +
Sbjct: 213 GGVATPADAALMMELGADGVFVGSGVFKSENPAKFAKAI 251
>gi|92112981|ref|YP_572909.1| nicotinate-nucleotide pyrophosphorylase [carboxylating]
[Chromohalobacter salexigens DSM 3043]
gi|91796071|gb|ABE58210.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Chromohalobacter salexigens DSM 3043]
Length = 284
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I + PV + + +DE+D L
Sbjct: 155 HNHRLGLHDAFLIKENHIAACGGIAEAVTAARRIASDLPVEVEVESLDELDAAL----EA 210
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L + +R+A A RS LE G V+ ++ + + G D +
Sbjct: 211 GADTIMLDNFALETLREAVARNAGRS-RLEASGNVSEATLREIAETGVDCI 260
>gi|304314014|ref|YP_003849161.1| tryptophan synthase, alpha subunit [Methanothermobacter
marburgensis str. Marburg]
gi|136261|sp|P26920|TRPA_METTM RecName: Full=Tryptophan synthase alpha chain
gi|99115|pir||D40362 trpA protein - Methanobacterium thermoautotrophicum (strain
Marburg)
gi|149750|gb|AAA73033.1| tryptophan synthase alpha-subunit [Methanothermobacter
thermautotrophicus]
gi|302587473|gb|ADL57848.1| tryptophan synthase, alpha subunit [Methanothermobacter
marburgensis str. Marburg]
Length = 265
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 83/240 (34%), Gaps = 49/240 (20%)
Query: 21 EEISNITKAGAKQIHF-----D-VMDGCFVP-------NISFGAD----VIRSLRSYSDS 63
E I + AGA + D + DG V N D +I +R ++
Sbjct: 31 EIIRTLVDAGADALEIGFPFSDPIADGTSVQEADLRALNSGMTTDDCFRLIERIREFTSV 90
Query: 64 VFD-------CHLMISSIDSHINIIADAGCDIIT---FHPESSPHIRRSLRTIHAMGKKT 113
+ M + D A+AG I PE + R+ G
Sbjct: 91 PVGLLVYYNLIYRMGA--DEFYRRAAEAGVTGILAADLPPEEAGDALRAAER---YGIDQ 145
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI--ESTIPKIRQAKALIGKRSIS 171
+ P T L+ + + + G G + EST+ I + K G S+
Sbjct: 146 IFIVAPTTDNQRLKMISEVSSGFHYLVSVMGVTGARSRVEESTLELIERVK---GAGSLP 202
Query: 172 LEVDG-GVT-SRNIKSLVQAGADLLVVGSSFF-----NQKGEISYAKRL----NDLKKSA 220
+ V G GV+ +++ L AGAD ++VGS+ N + + +K +A
Sbjct: 203 VMV-GFGVSQPEHVRMLADAGADGVIVGSAIIDLISKNLDDRERMLQEIYEMVRKMKTAA 261
>gi|295400072|ref|ZP_06810052.1| thiamine-phosphate pyrophosphorylase [Geobacillus
thermoglucosidasius C56-YS93]
gi|294977851|gb|EFG53449.1| thiamine-phosphate pyrophosphorylase [Geobacillus
thermoglucosidasius C56-YS93]
Length = 211
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IR + I + GG+T+ N ++ AGAD + V S+ + + K+L
Sbjct: 150 IRLLRD--NGIDIPIVGIGGITAENASEVMNAGADGVSVISAIASAPSPLLATKQLAQ 205
>gi|157163459|ref|YP_001460777.1| thiazole synthase [Escherichia coli HS]
gi|161984806|ref|YP_410280.2| thiazole synthase [Shigella boydii Sb227]
gi|161986398|ref|YP_312903.2| thiazole synthase [Shigella sonnei Ss046]
gi|187732480|ref|YP_001882677.1| thiazole synthase [Shigella boydii CDC 3083-94]
gi|191168653|ref|ZP_03030434.1| thiazole biosynthesis protein ThiG [Escherichia coli B7A]
gi|300819802|ref|ZP_07099989.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 107-1]
gi|309797694|ref|ZP_07692080.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 145-7]
gi|116256171|sp|Q31U06|THIG_SHIBS RecName: Full=Thiazole synthase
gi|116256173|sp|Q3YUZ4|THIG_SHISS RecName: Full=Thiazole synthase
gi|166987554|sp|A8A790|THIG_ECOHS RecName: Full=Thiazole synthase
gi|226703927|sp|B2TWH8|THIG_SHIB3 RecName: Full=Thiazole synthase
gi|157069139|gb|ABV08394.1| thiazole biosynthesis protein ThiG [Escherichia coli HS]
gi|187429472|gb|ACD08746.1| thiazole biosynthesis protein ThiG [Shigella boydii CDC 3083-94]
gi|190901293|gb|EDV61061.1| thiazole biosynthesis protein ThiG [Escherichia coli B7A]
gi|300527623|gb|EFK48685.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 107-1]
gi|308118706|gb|EFO55968.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 145-7]
gi|323167460|gb|EFZ53168.1| thiazole biosynthesis protein thiG [Shigella sonnei 53G]
gi|332092309|gb|EGI97384.1| thiazole biosynthesis protein thiG [Shigella boydii 3594-74]
Length = 256
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|325576574|ref|ZP_08147292.1| thiamine-phosphate diphosphorylase [Haemophilus parainfluenzae ATCC
33392]
gi|325161137|gb|EGC73252.1| thiamine-phosphate diphosphorylase [Haemophilus parainfluenzae ATCC
33392]
Length = 225
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+D ++++ + D I H S +++R G ++N I E+ + EI
Sbjct: 82 VDDNVDLALEIEADGI--HVGQSDTPVKTIRARTHKPFIIGWSVNRLDEAKIGEE-LSEI 138
Query: 134 DMILIMTVNPGFGGQQLIEST-IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
D I + P + + + I+ + + + GGV ++K+L + GAD
Sbjct: 139 DYFGIGPIFPTQSKENPKPTLGMAFIQTLRKAGITKPL--VAIGGVKLEHVKTLRKYGAD 196
Query: 193 LLVVGSSFFNQKGEISYAKRLND 215
+ V ++ K + K L +
Sbjct: 197 GIAVITAISQAKDIKASTKALKE 219
>gi|255645323|gb|ACU23158.1| unknown [Glycine max]
Length = 300
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ K +AL L+V GG+ S N S ++ GA ++V S FN G++ RL
Sbjct: 105 LSKAAALQALHAYPGG-LQVGGGINSDNCLSYIEEGASHVIVTSYVFN-NGQMD-IGRLK 161
Query: 215 DLKK 218
DL +
Sbjct: 162 DLVQ 165
>gi|303256940|ref|ZP_07342954.1| ModD protein [Burkholderiales bacterium 1_1_47]
gi|330998808|ref|ZP_08322535.1| quinolinate phosphoribosyl transferase protein [Parasutterella
excrementihominis YIT 11859]
gi|302860431|gb|EFL83508.1| ModD protein [Burkholderiales bacterium 1_1_47]
gi|329576022|gb|EGG57541.1| quinolinate phosphoribosyl transferase protein [Parasutterella
excrementihominis YIT 11859]
Length = 278
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 11/113 (9%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + +A+ + + + D+I ++
Sbjct: 166 HRVFCKDPVAAISVAKKHEPEKKIAVEVDNEEEGFKYIHAGADIIQC---------ERFS 216
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
+ + K AKA + + + GG+ N G+++LV S + +
Sbjct: 217 PAAL-KAFVAKARNIRNDVIINAAGGINDTNASEYALTGSNVLVT-SWVYFGR 267
>gi|290890547|ref|ZP_06553622.1| hypothetical protein AWRIB429_1012 [Oenococcus oeni AWRIB429]
gi|290479943|gb|EFD88592.1| hypothetical protein AWRIB429_1012 [Oenococcus oeni AWRIB429]
Length = 294
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +AK +
Sbjct: 213 GGVATPADAALMMELGADGVFVGSGVFKSENPAKFAKAI 251
>gi|187935649|ref|YP_001886506.1| dihydropyrimidine dehydrogenase [Clostridium botulinum B str.
Eklund 17B]
gi|187723802|gb|ACD25023.1| dihydroorotate dehydrogenase family protein [Clostridium botulinum
B str. Eklund 17B]
Length = 412
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 66/199 (33%), Gaps = 41/199 (20%)
Query: 3 PSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------ 53
P+ +V SI+ + + +T+AGA I + P ++ G+DV
Sbjct: 101 PTKIVVASIMGENEKEWEDLAKLVTEAGADMIECNFS----CPQMTSHEMGSDVGQNPEL 156
Query: 54 ----IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
+ R ++ + + D + IA E ++ TI ++
Sbjct: 157 VKKYCEATRRGTNLPILAKMTPNIGDMSVPAIAS---------MEGGATGLATINTIKSI 207
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
G+ IN T ++ + G+ G+ + + I + +
Sbjct: 208 T---GIDINSMTAK----------PVVNAKSSVSGYSGKAVKPIALRFIYELAKNEKLKG 254
Query: 170 ISLEVDGGVTSRNIKSLVQ 188
+ + GG+ + ++
Sbjct: 255 VPISGIGGI--ETWEDALE 271
>gi|167748372|ref|ZP_02420499.1| hypothetical protein ANACAC_03116 [Anaerostipes caccae DSM 14662]
gi|167652364|gb|EDR96493.1| hypothetical protein ANACAC_03116 [Anaerostipes caccae DSM 14662]
Length = 257
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDL 216
+R+A A + + L+V GG+T N ++ GA ++V S F+ + K+L+DL
Sbjct: 71 VREALAALREFPGGLQVGGGITDENASFFIEQGASHVIVTSFVFSAGMIRLERLKKLSDL 130
>gi|41018348|sp|Q8DHK2|THIE_THEEB RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
Length = 351
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA-ILEDVIDEIDMILIMTVN--PGFGG 147
H R I + G + + + + D + + I PG
Sbjct: 224 VHLGQMDIPMELARQILGRDRLVGRSTTNAQELERAIAEGADYVGVGPIFATPTKPGKAA 283
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGE 206
++ A+ ++ GG+ NI+ +++AGA + VV +
Sbjct: 284 VGF-----DYLQYARKHAPMPQFAI---GGIDLSNIEEVIKAGATQVAVV-RAIMAAADP 334
Query: 207 ISYAKRLNDLKK 218
+ + L L++
Sbjct: 335 EATTREL--LRR 344
>gi|22299490|ref|NP_682737.1| thiamine-phosphate pyrophosphorylase [Thermosynechococcus elongatus
BP-1]
gi|22295673|dbj|BAC09499.1| thiamin-phosphate pyrophosphorylase [Thermosynechococcus elongatus
BP-1]
Length = 357
Score = 36.3 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA-ILEDVIDEIDMILIMTVN--PGFGG 147
H R I + G + + + + D + + I PG
Sbjct: 230 VHLGQMDIPMELARQILGRDRLVGRSTTNAQELERAIAEGADYVGVGPIFATPTKPGKAA 289
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGE 206
++ A+ ++ GG+ NI+ +++AGA + VV +
Sbjct: 290 VGF-----DYLQYARKHAPMPQFAI---GGIDLSNIEEVIKAGATQVAVV-RAIMAAADP 340
Query: 207 ISYAKRLNDLKK 218
+ + L L++
Sbjct: 341 EATTREL--LRR 350
>gi|156935372|ref|YP_001439288.1| quinolinate phosphoribosyltransferase [Cronobacter sakazakii ATCC
BAA-894]
gi|156533626|gb|ABU78452.1| hypothetical protein ESA_03230 [Cronobacter sakazakii ATCC BAA-894]
Length = 296
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
++P+ PV + + +DE+D L G L T+ ++R+A ++ LEV G
Sbjct: 205 LHPDVPVEVEVESLDELDAAL----KAGADIIMLDNFTVDQMREAVKRTAGQA-RLEVSG 259
Query: 177 GVTSRNIKSLVQAGADLLVVG 197
VT ++ + G D + VG
Sbjct: 260 NVTLETLREFAETGVDFISVG 280
>gi|107021696|ref|YP_620023.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
cenocepacia AU 1054]
gi|116688642|ref|YP_834265.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
cenocepacia HI2424]
gi|105891885|gb|ABF75050.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Burkholderia
cenocepacia AU 1054]
gi|116646731|gb|ABK07372.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Burkholderia
cenocepacia HI2424]
Length = 225
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 20/161 (12%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT 113
I +LR +++ + DAG +I I ++
Sbjct: 66 IAALRRALPDDMIVGAGTVLRAEYVDRVQDAGGALIVM-------PHSDAAVIR-RARER 117
Query: 114 GVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G+A P TP + + D +L M + + ++ +A+I +
Sbjct: 118 GLASAPGVATPTEAFAALTNGAD-VLKMF--------PAEQLGVTVVKAWRAVIDRAVPL 168
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ V GG++ N++ + AGA+ +GS+ +
Sbjct: 169 IPV-GGISLDNMQPFLDAGANGFGLGSALYRPGQSADTTAA 208
>gi|186683999|ref|YP_001867195.1| orotidine 5'-phosphate decarboxylase [Nostoc punctiforme PCC 73102]
gi|186466451|gb|ACC82252.1| orotidine 5'-phosphate decarboxylase [Nostoc punctiforme PCC 73102]
Length = 243
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 28/159 (17%)
Query: 82 ADAGCDIITFHPESSPH-IRRSLRTIHAMGKKTG------VAINPETPVAI------LED 128
A G D++T H ++ ++ H K G +AI T ++ L+
Sbjct: 82 ARYGVDLLTIHATCGRDALKAAIEAAHEGAVKAGVQPPKLIAITLLTSISARQLAFDLKI 141
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL-------EVDGGVTSR 181
++ + L M + G + + ++ Q + G R + + D +
Sbjct: 142 PLELPEYALEMALLAQECGLDGVVCSPQEVAQLRETCGDRFLLVCPGVRPTWAD---NAD 198
Query: 182 -----NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++AGAD LV+G KR+++
Sbjct: 199 QKRSLTPAQAMKAGADYLVIGRPITTATEPELAWKRISE 237
>gi|323456122|gb|EGB11989.1| hypothetical protein AURANDRAFT_19812 [Aureococcus anophagefferens]
Length = 283
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
Query: 114 GVAINPETPVAILED-VIDEIDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSIS 171
G A+ P + ++++ +M + G GQ + S+ + + + S+
Sbjct: 153 GFAVLPYCSPDPILCRHLEDVGCATVMPLGSPIGSGQGIDASSC-----IRVICEQASVP 207
Query: 172 LEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ VD G+ T + ++ GAD ++ S+ + A+
Sbjct: 208 VVVDAGLRTPSDAALAMELGADAVLANSAVARASDAPAMARAFK 251
>gi|323341851|ref|ZP_08082084.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464276|gb|EFY09469.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 214
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 145 FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL--LVVGSSFFN 202
F G S + +I++ + + V GG+ +K G ++ +VG S
Sbjct: 139 FSGTSWEPSDLKRIQKLIEM----GFEISVTGGLNLETLKLFK--GMNIGTFIVGRSITE 192
Query: 203 QKGEISYAKRLND 215
+ + A+ +
Sbjct: 193 SESPGTRAQAFQN 205
>gi|221199265|ref|ZP_03572309.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
multivorans CGD2M]
gi|221205833|ref|ZP_03578848.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
multivorans CGD2]
gi|221174671|gb|EEE07103.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
multivorans CGD2]
gi|221180550|gb|EEE12953.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Burkholderia
multivorans CGD2M]
Length = 293
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N PV I + + ++D L G L T+ +R+A + +++ L
Sbjct: 197 AAFALNAGVPVQIEVETLAQLDTALAH----GAQSVLLDNFTLDMMREAVRVAAGKAV-L 251
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 252 EVSGGVNFDTVRTFAETGVD 271
>gi|167586086|ref|ZP_02378474.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
ubonensis Bu]
Length = 218
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILED 128
+ + +++ + DAG +I I ++ G+A P TP
Sbjct: 84 VLRPE-YVDRVRDAGGALIVM-------PHSDGAVIR-RARELGLASAPGVATPTEAFAA 134
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ + D +L M + + ++ +A+I + + V GGVT N+++ +
Sbjct: 135 LANGAD-VLKMF--------PAEQLGLTVVKAWRAVIDRAVPLVPV-GGVTPDNMQAFLA 184
Query: 189 AGADLLVVGSSFFN 202
AGA+ +GS+ +
Sbjct: 185 AGANGFGLGSALYR 198
>gi|71734451|ref|YP_273122.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555004|gb|AAZ34215.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 282
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLSELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ LE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLEDMREAVRLTAGRA-RLEASGGINDDTLRVIAETGVDYI 262
>gi|282899290|ref|ZP_06307260.1| Nicotinate-nucleotide pyrophosphorylase [Cylindrospermopsis
raciborskii CS-505]
gi|281195816|gb|EFA70743.1| Nicotinate-nucleotide pyrophosphorylase [Cylindrospermopsis
raciborskii CS-505]
Length = 280
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ + K + L GG+ N+++ G D+LV +F + +I
Sbjct: 226 VTELKQ--KYPGLKLAAAGGINLENVRNYASTGVDILVTSYPYFGKPADIGAK 276
>gi|86143072|ref|ZP_01061494.1| putative inosine-5'-monophosphate dehydrogenase [Leeuwenhoekiella
blandensis MED217]
gi|85830517|gb|EAQ48976.1| putative inosine-5'-monophosphate dehydrogenase [Leeuwenhoekiella
blandensis MED217]
Length = 490
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 51/132 (38%), Gaps = 14/132 (10%)
Query: 78 INIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + +AG D + T H + + R L+++ V + + +++
Sbjct: 237 VEALVNAGVDAVVVDTAHG-HTQGVVRVLKSVKEKFPGLDVVVGNIATADAAKYLVEAGA 295
Query: 135 MILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSL 186
+ + + PG G + + A + I + DGG+ + +I
Sbjct: 296 DAVKVGIGPGSICTTRVVAGVGF--PQFSAVLEVAAALKGTGIPVIADGGIRYTGDIPKA 353
Query: 187 VQAGADLLVVGS 198
+ AGAD +++GS
Sbjct: 354 IAAGADCVMLGS 365
>gi|308187457|ref|YP_003931588.1| N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-
phosphoribosyl)-4-imidazolecarboxamide isomerase
[Pantoea vagans C9-1]
gi|308057967|gb|ADO10139.1| N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-
phosphoribosyl)-4-imidazolecarboxamide isomerase
[Pantoea vagans C9-1]
Length = 245
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
P+ L+D + + +L + G + +I K L+ ++++V GG+ SR
Sbjct: 31 PLPRLQDYVSQGATVLHLVDLTGAK-----DPAKRQIALLKTLLDGVDVTVQVGGGIRSR 85
Query: 182 N-IKSLVQAGADLLVVGS-SFFNQKGEISYAKRLNDLKKSA--LAID 224
N + +L++AGA +VVGS + K + L + A LA+D
Sbjct: 86 NDVYALLEAGASRVVVGSTAV---KEPEEVKRWLAEFGAEAIVLALD 129
>gi|160943050|ref|ZP_02090288.1| hypothetical protein FAEPRAM212_00527 [Faecalibacterium prausnitzii
M21/2]
gi|158445744|gb|EDP22747.1| hypothetical protein FAEPRAM212_00527 [Faecalibacterium prausnitzii
M21/2]
gi|295103432|emb|CBL00976.1| thiamine-phosphate diphosphorylase [Faecalibacterium prausnitzii
SL3/3]
Length = 212
Score = 36.3 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 22/59 (37%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ + + GG+ NI L G D + + S+ F K + + L L +
Sbjct: 151 LLDICNAVDVPVVAIGGIHKENILQLKGTGVDGVALVSAIFAAKDIEAECRELRALSEQ 209
>gi|326202637|ref|ZP_08192505.1| modD protein [Clostridium papyrosolvens DSM 2782]
gi|325987221|gb|EGD48049.1| modD protein [Clostridium papyrosolvens DSM 2782]
Length = 280
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLV 195
IM G G Q + ++Q I + +I+L GG+ N++ G D +
Sbjct: 202 IMLAEAGVDGIQFDKVPASDLKQIVDSIRRINPNITLIAAGGINGGNVQEYADTGVDTI- 260
Query: 196 VGSSFFNQKGEISYAKRLNDL 216
+S + K + L
Sbjct: 261 ATTSVYFGK-PADIKVTMERL 280
>gi|225174369|ref|ZP_03728368.1| geranylgeranylglyceryl phosphate synthase [Dethiobacter
alkaliphilus AHT 1]
gi|225170154|gb|EEG78949.1| geranylgeranylglyceryl phosphate synthase [Dethiobacter
alkaliphilus AHT 1]
Length = 244
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GG+ T+ + L++AGAD+LV G+ Y +RL+++
Sbjct: 201 GGIRTAAVARQLLEAGADILVTGTVV----ERHEYKQRLSEI 238
>gi|197118702|ref|YP_002139129.1| quinolinate phosphoribosyltransferase (decarboxylating) [Geobacter
bemidjiensis Bem]
gi|197088062|gb|ACH39333.1| quinolinate phosphoribosyltransferase (decarboxylating) [Geobacter
bemidjiensis Bem]
Length = 276
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
V G L + ++ +A +IGKR++ +E GGV + IKS+ Q G D++ VG
Sbjct: 203 VEAGADIIMLDNMGLEEMTKAVQMIGKRAL-VEASGGVNLQTIKSIAQTGVDIISVG 258
>gi|116491065|ref|YP_810609.1| pyridoxine biosynthesis protein [Oenococcus oeni PSU-1]
gi|116091790|gb|ABJ56944.1| pyridoxal phosphate synthase yaaD subunit [Oenococcus oeni PSU-1]
Length = 294
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +AK +
Sbjct: 213 GGVATPADAALMMELGADGVFVGSGVFKSENPAKFAKAI 251
>gi|33152631|ref|NP_873984.1| pyridoxine biosynthesis protein [Haemophilus ducreyi 35000HP]
gi|46396335|sp|Q7VL86|PDXS_HAEDU RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|33148855|gb|AAP96373.1| putative pyridoxine biosynthesis protein [Haemophilus ducreyi
35000HP]
Length = 295
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMELGADGVFVGSGIFKAENPEKFARAI 252
>gi|103486801|ref|YP_616362.1| thiamine-phosphate pyrophosphorylase [Sphingopyxis alaskensis
RB2256]
gi|98976878|gb|ABF53029.1| thiamine-phosphate pyrophosphorylase [Sphingopyxis alaskensis
RB2256]
Length = 216
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 175 DGGVTSRNIKSLVQAGAD-LLVVGSSFFN-QKGEISYAKRLNDL 216
GG+T N K+L AGAD + V G +N + G + + ++
Sbjct: 167 IGGITIDNAKTLADAGADFVAVSG-GVWNYRDGPGAAVRAFAEI 209
>gi|322383462|ref|ZP_08057242.1| thiamine-phosphate pyrophosphorylase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
gi|321152263|gb|EFX45089.1| thiamine-phosphate pyrophosphorylase-like protein [Paenibacillus
larvae subsp. larvae B-3650]
Length = 217
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
IR+ + + + GG+T+ +++AGAD + V SS A ++ ++
Sbjct: 150 IRRLRG--EGIFMPIVGIGGITASRSGDVIRAGADGVAVISSITGSADPEKEAGQILEMV 207
Query: 218 KSA 220
A
Sbjct: 208 HQA 210
>gi|319957634|ref|YP_004168897.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Nitratifractor salsuginis DSM 16511]
gi|319420038|gb|ADV47148.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Nitratifractor salsuginis DSM 16511]
Length = 278
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 153 STIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
T +IR+ AL + + LE G +T + I+S+ + G D + GS
Sbjct: 215 MTPEQIREVVALRNEHFPHVLLEASGNITLKTIRSVAETGVDAVSSGSII 264
>gi|240102681|ref|YP_002958990.1| nicotinate-nucleotide pyrophosphorylase [Thermococcus gammatolerans
EJ3]
gi|239910235|gb|ACS33126.1| Nicotinate-nucleotide pyrophosphorylase (Quinolinate
phosphoribosyltransferase) (nadC) [Thermococcus
gammatolerans EJ3]
Length = 277
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I K + + +EV GG+T NI+ + D++ +G
Sbjct: 217 ETIDALKREGLRDRVKIEVSGGITPENIEEYAKLDVDVISLG 258
>gi|209886147|ref|YP_002290004.1| thiamine-phosphate pyrophosphorylase [Oligotropha carboxidovorans
OM5]
gi|209874343|gb|ACI94139.1| thiamine-phosphate pyrophosphorylase [Oligotropha carboxidovorans
OM5]
Length = 202
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
IP+I + K IG +I L GG+ + + AGAD + V S +
Sbjct: 133 FKPQGIPRITEWKRAIG--TIPLVAIGGIKLEHAADVFAAGADSIAVVSDVTQNADPDAR 190
Query: 210 AKRLND 215
+ D
Sbjct: 191 VRAWLD 196
>gi|3249059|gb|AAC24044.1| orotidine-5'-monophosphate decarboxylase [Thermoplasma acidophilum]
Length = 214
Score = 36.3 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
++AGADL++VG S + ++ A+ +N+ A A++
Sbjct: 173 ASDAIKAGADLVIVGRSIYESADPVTAAEAINE--GIAKAVE 212
>gi|317056813|ref|YP_004105280.1| thiamine-phosphate pyrophosphorylase [Ruminococcus albus 7]
gi|315449082|gb|ADU22646.1| thiamine-phosphate pyrophosphorylase [Ruminococcus albus 7]
Length = 210
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
Q + + I + GG++ N+ L GAD + S+ F + + + L L
Sbjct: 147 EQLREIAASVDIPVTAIGGISKSNMTELKGCGADGAALVSAIFAAENIETECRELKKL 204
>gi|254168663|ref|ZP_04875505.1| orotidine 5'-phosphate decarboxylase [Aciduliprofundum boonei T469]
gi|254168822|ref|ZP_04875663.1| orotidine 5'-phosphate decarboxylase [Aciduliprofundum boonei T469]
gi|289596814|ref|YP_003483510.1| orotidine 5'-phosphate decarboxylase [Aciduliprofundum boonei T469]
gi|197622259|gb|EDY34833.1| orotidine 5'-phosphate decarboxylase [Aciduliprofundum boonei T469]
gi|197622289|gb|EDY34862.1| orotidine 5'-phosphate decarboxylase [Aciduliprofundum boonei T469]
gi|289534601|gb|ADD08948.1| orotidine 5'-phosphate decarboxylase [Aciduliprofundum boonei T469]
Length = 209
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 75/208 (36%), Gaps = 10/208 (4%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
ILA D + + I+ + A +H + V ++ G D+I SL + D +
Sbjct: 5 ILALDVTDREKAINIANEV-ADYLHAIKIGWPLV--MAAGMDIIDSLSQIKPIICDFKVA 61
Query: 71 ISSIDS--HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
+ + + G I H ++ + GK + + L+
Sbjct: 62 DIPNTTKLIVREARNHGAMGIIVHGFVGRDSIKA--AVDEAGKMKVYVVAEMSHPGALDF 119
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLV 187
+ D I++M G G + +I ++L G + + G G + K +
Sbjct: 120 MQKHTDDIVLMAKEVGAAGLIAPATRPERITHIRSLAG--DMEILAPGVGAQGGSAKEAI 177
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLND 215
+AGA ++VG + AK L D
Sbjct: 178 EAGATHIIVGRRIYEANEPAKAAKALYD 205
>gi|162146397|ref|YP_001600856.1| nicotinate-nucleotide pyrophosphorylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209543593|ref|YP_002275822.1| nicotinate-nucleotide pyrophosphorylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161784972|emb|CAP54515.1| Nicotinate-nucleotide pyrophosphorylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531270|gb|ACI51207.1| nicotinate-nucleotide pyrophosphorylase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 284
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 132 EIDMILIMTVNPGFGGQQ---LIESTIPKIRQAKALIGKRSISLEVD--GGVTSRNIKSL 186
E+D + + G GG L T+P++R+A A++ R+++ D GG+T +
Sbjct: 199 EVDTLDQLAQALGAGGADVFLLDNMTLPQLREAVAMVDGRALT---DASGGITPDTAADI 255
Query: 187 VQAGADLLVVG 197
+ G D+L VG
Sbjct: 256 ARTGVDILSVG 266
>gi|331702513|ref|YP_004399472.1| thiamine-phosphate pyrophosphorylase [Lactobacillus buchneri NRRL
B-30929]
gi|329129856|gb|AEB74409.1| Thiamine-phosphate pyrophosphorylase [Lactobacillus buchneri NRRL
B-30929]
Length = 210
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
T+ KI++ I + GG+ + N++++ A D + V S+ S + L
Sbjct: 148 TLGKIKRLV------DIPVYAIGGLKADNVEAIDGAHVDGVAVVSAIMKAADPASATREL 201
Query: 214 NDLKKSAL 221
D + A+
Sbjct: 202 RDAVEEAI 209
>gi|320330239|gb|EFW86224.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 282
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLSELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ LE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLEDMREAVRLTAGRA-RLEASGGINDDTLRVIAETGVDYI 262
>gi|315651783|ref|ZP_07904787.1| thiamine-phosphate diphosphorylase [Eubacterium saburreum DSM 3986]
gi|315485913|gb|EFU76291.1| thiamine-phosphate diphosphorylase [Eubacterium saburreum DSM 3986]
Length = 204
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
K++ + +++ GG+ + NI L + D + V S+ F K K L+
Sbjct: 141 YEKVKSICEAVDIPKVAI---GGINAENILKLKGSKIDGVAVVSAIFGAKDIGKATKELD 197
Query: 215 DL 216
L
Sbjct: 198 TL 199
>gi|311032518|ref|ZP_07710608.1| thiamine-phosphate pyrophosphorylase [Bacillus sp. m3-13]
Length = 215
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
IR+ + ++ + GG+ + N +++AGAD + V S+ + + AK
Sbjct: 153 IREIRH--AGLTVPIVGIGGIDAGNALDVLEAGADGVAVISAISKAESALEAAKE 205
>gi|307354398|ref|YP_003895449.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanoplanus petrolearius DSM 11571]
gi|307157631|gb|ADN37011.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanoplanus petrolearius DSM 11571]
Length = 236
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 74/203 (36%), Gaps = 29/203 (14%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI 80
+ GA ++H +DG F + A++IR L + + I S++
Sbjct: 33 DCAKRWIDEGADRLHIVNLDGAFG-SAGSNAELIRELVRETGAYVQLGGGIRSVEDASGW 91
Query: 81 IADAGCDII------TFHPESSPHIRRSLRTIHAMGKKTGVAIN------------PETP 122
+ D G D + T HPE+ + GV
Sbjct: 92 L-DTGVDRVILGTLATEHPEAVTEVSDLFGKER---VVAGVDARGGQVVVKGWENSAGDY 147
Query: 123 VAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SR 181
+ + + L+ T G Q+ I+ + L+ S+ + V GG++
Sbjct: 148 IEWAKRFEEAGAGALLFTNVDVEGLQKGIDPVP-----VERLVKATSLPVIVAGGISSPE 202
Query: 182 NIKSLVQAGADLLVVGSSFFNQK 204
++ + + GAD +V+GS+ ++ +
Sbjct: 203 DVVKIKKIGADGIVLGSALYSGR 225
>gi|296283937|ref|ZP_06861935.1| thiamine-phosphate pyrophosphorylase [Citromicrobium bathyomarinum
JL354]
Length = 221
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GG+T N L+ AGAD L V + +N + + +
Sbjct: 178 IGGITPDNCAPLIAAGADFLAVSGAVWNGDEVAAVKAFVRAI 219
>gi|258593333|emb|CBE69672.1| quinolinate phosphoribosyltransferase (nicotinate-nucleotide
pyrophosphorylase) [NC10 bacterium 'Dutch sediment']
Length = 287
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 121 TPVAILEDVID-EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
T + L++ + ++D +L+ ++P E + + R I++E GG+T
Sbjct: 200 TTLEELQEALRYDLDAVLLDNMHP--------EMVRQAVACVRTHERGRKITVEASGGMT 251
Query: 180 SRNIKSLVQAGADLL 194
N+++ +AG D +
Sbjct: 252 LDNVRTFAEAGVDWI 266
>gi|47096401|ref|ZP_00233995.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes str.
1/2a F6854]
gi|254900500|ref|ZP_05260424.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes J0161]
gi|254913549|ref|ZP_05263561.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes J2818]
gi|254937870|ref|ZP_05269567.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes F6900]
gi|47015196|gb|EAL06135.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes str.
1/2a F6854]
gi|258610477|gb|EEW23085.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes F6900]
gi|293591560|gb|EFF99894.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes J2818]
Length = 214
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+I + GG+ N+ ++ AGAD + V S+ S K+L +
Sbjct: 163 TIPIVGIGGINETNLAEVLTAGADGVSVISAITQSDDCHSVIKQLKN 209
>gi|298485528|ref|ZP_07003610.1| Quinolinate phosphoribosyltransferase [decarboxylating]
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298159928|gb|EFI00967.1| Quinolinate phosphoribosyltransferase [decarboxylating]
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|331013043|gb|EGH93099.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 282
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLSELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ LE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLDDMREAVRLTAGRA-RLEASGGINDDTLRVIAETGVDYI 262
>gi|260858100|ref|YP_003231991.1| thiamin biosynthesis ThiGH complex subunit ThiG [Escherichia coli
O26:H11 str. 11368]
gi|257756749|dbj|BAI28251.1| thiamin biosynthesis ThiGH complex subunit ThiG [Escherichia coli
O26:H11 str. 11368]
gi|323155562|gb|EFZ41739.1| thiazole biosynthesis protein thiG [Escherichia coli EPECa14]
Length = 256
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK L ++ L
Sbjct: 213 PVNMAKALRLAVEAGL 228
>gi|296109423|ref|YP_003616372.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanocaldococcus infernus ME]
gi|295434237|gb|ADG13408.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanocaldococcus infernus ME]
Length = 239
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 122 PVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTS- 180
P+ ++E D++ IL V+ + L++ KI + K LI + + GGVT
Sbjct: 148 PIDVIEKFKDKVGYILYTNVDV----EGLMKGI--KIEEIKNLIKNSPLPVIYSGGVTKI 201
Query: 181 RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+I +L + GA +V+GS+ + KG+IS + L L+
Sbjct: 202 DDIITLKELGAYGVVIGSALY--KGKISLREALKVLEN 237
>gi|319652955|ref|ZP_08007060.1| thiamine-phosphate pyrophosphorylase [Bacillus sp. 2_A_57_CT2]
gi|317395304|gb|EFV76037.1| thiamine-phosphate pyrophosphorylase [Bacillus sp. 2_A_57_CT2]
Length = 222
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 168 RSISLEV----DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
RS +++ GG+TS N L++AGAD + V S+ A +L D
Sbjct: 161 RSADIQIPVVGIGGITSENASPLIEAGADGVSVISAISQADSPEKAAAKLYD 212
>gi|296132833|ref|YP_003640080.1| inosine-5'-monophosphate dehydrogenase [Thermincola sp. JR]
gi|296031411|gb|ADG82179.1| inosine-5'-monophosphate dehydrogenase [Thermincola potens JR]
Length = 484
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 14/140 (10%)
Query: 70 MISSIDSHINIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
+ + ++ + DA D+IT H S + ++ I V
Sbjct: 226 VTKDMMDRVSALVDAKVDVITVDTAHG-HSRGVLDAVYMIKKKYPDVDVIAGNVATAEAT 284
Query: 127 EDVIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
D+I + + + PG G + I I K I + DGG+
Sbjct: 285 VDLIKAGADCVKVGIGPGSICTTRVVAGIGV--PQITAIMDCAEEAEKHGIPIIADGGIK 342
Query: 180 SR-NIKSLVQAGADLLVVGS 198
+I + AGA+++++GS
Sbjct: 343 YSGDIVKAIAAGANVVMIGS 362
>gi|291527275|emb|CBK92861.1| thiamine-phosphate diphosphorylase [Eubacterium rectale M104/1]
Length = 216
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + I + GG+ + N +L G A + VVG + F + A+ L ++
Sbjct: 156 LREITEAVDIPVVAIGGINADNAVTLKGTGIAGIAVVG-AIFASADIRAAARELAEI 211
>gi|293417493|ref|ZP_06660116.1| thiamine biosynthesis ThiG [Escherichia coli B185]
gi|291430820|gb|EFF03817.1| thiamine biosynthesis ThiG [Escherichia coli B185]
Length = 342
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 184 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 243
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 244 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 298
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 299 PVNMAKAFRLAVEAGL 314
>gi|206561744|ref|YP_002232509.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Burkholderia
cenocepacia J2315]
gi|198037786|emb|CAR53730.1| putative aldolase [Burkholderia cenocepacia J2315]
Length = 225
Score = 36.3 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
++ +A+I + + V GG+ N++ + AGA+ +GS+ +
Sbjct: 155 VKAWRAVIDRAVPLIPV-GGIAPDNMRPFLDAGANGFGLGSALYRPGQSADTTAA 208
>gi|312110679|ref|YP_003988995.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. Y4.1MC1]
gi|311215780|gb|ADP74384.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. Y4.1MC1]
Length = 219
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
IR + I + GG+T+ N ++ AGAD + V S+ + + K+L
Sbjct: 158 IRLLRD--NGIDIPIVGIGGITAENASEVMNAGADGVSVISAIASAPSPLLATKQLAQ 213
>gi|289628837|ref|ZP_06461791.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289651013|ref|ZP_06482356.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330867380|gb|EGH02089.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 282
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLSELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ LE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLDDMREAVRLTAGRA-RLEASGGINDDTLRVIAETGVDYI 262
>gi|261330354|emb|CBH13338.1| S-adenosyl-methyltransferase mraW-like protein,putative
[Trypanosoma brucei gambiense DAL972]
Length = 474
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 145 FGGQQLIESTIPKIRQAKALIGKRSIS-LEVDGGVTS 180
FGG + K+ +AKA+ G+RS + +DGGV+
Sbjct: 174 FGGDRFRFYC-CKMSEAKAMFGERSFDAIMIDGGVSD 209
>gi|154150609|ref|YP_001404227.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Candidatus
Methanoregula boonei 6A8]
gi|167011538|sp|A7I773|HIS4_METB6 RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|153999161|gb|ABS55584.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methanoregula boonei 6A8]
Length = 236
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 161 AKALIGKRSISLEVDGGVTS-RNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ LIG I + V GGV++ ++ L ++GA V+GS+ ++ K I+ ++ L + +
Sbjct: 181 VRRLIGNVRIPVVVAGGVSARADVALLKESGAYGAVLGSALYSGK--INLSEALEESR 236
>gi|225873384|ref|YP_002754843.1| tryptophan synthase, alpha subunit [Acidobacterium capsulatum ATCC
51196]
gi|225793349|gb|ACO33439.1| tryptophan synthase, alpha subunit [Acidobacterium capsulatum ATCC
51196]
Length = 257
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 16/134 (11%)
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ--QLIESTIPK 157
L + + P +P L+ + D + G G L P
Sbjct: 129 AEYLEHLRRHHLAPIFLVAPTSPDERLKKIAAVTDGFIYAISRVGITGTQSSLASEAEPL 188
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG--ADLLVVGSSFF-------NQKGEIS 208
+++ + S+ + V G N + + G AD V+GS+ + S
Sbjct: 189 VQRLRQ---YTSLPIAV--GFGVSNADHVAEVGRFADAAVIGSAIVANIEKAGRTEAPSS 243
Query: 209 YAKRLNDLKKSALA 222
A+ + L+ S A
Sbjct: 244 IARFIEGLRPSVPA 257
>gi|257061888|ref|YP_003139776.1| glycine oxidase ThiO [Cyanothece sp. PCC 8802]
gi|256592054|gb|ACV02941.1| glycine oxidase ThiO [Cyanothece sp. PCC 8802]
Length = 666
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 114 GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSIS 171
G A+ P L ++E+ +M + G GQ + + I +I + ++
Sbjct: 528 GFAVLPYINADPLLAKRLEEVGCATVMPLGSPIGSGQGIRNTANIAI-----IIEEATVP 582
Query: 172 LEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ VD G+ T ++ GAD +++ S+ K + AK +
Sbjct: 583 VVVDAGIGTPSEAAQAMELGADAVLINSAIALAKDPVIMAKAM 625
>gi|218248826|ref|YP_002374197.1| glycine oxidase ThiO [Cyanothece sp. PCC 8801]
gi|218169304|gb|ACK68041.1| glycine oxidase ThiO [Cyanothece sp. PCC 8801]
Length = 666
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 114 GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSIS 171
G A+ P L ++E+ +M + G GQ + + I +I + ++
Sbjct: 528 GFAVLPYINADPLLAKRLEEVGCATVMPLGSPIGSGQGIRNTANIAI-----IIEEATVP 582
Query: 172 LEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ VD G+ T ++ GAD +++ S+ K + AK +
Sbjct: 583 VVVDAGIGTPSEAAQAMELGADAVLINSAIALAKDPVIMAKAM 625
>gi|34762265|ref|ZP_00143270.1| FUSOBACTERIUM OUTER MEMBRANE PROTEIN FAMILY [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
gi|27888051|gb|EAA25113.1| FUSOBACTERIUM OUTER MEMBRANE PROTEIN FAMILY [Fusobacterium nucleatum
subsp. vincentii ATCC 49256]
Length = 2961
Score = 36.3 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLV------QAGADLLVVGSSFFNQKGEISYAKRL 213
+ K G ++L VDGG+ N +++ GA V G S F KG I+ +
Sbjct: 1114 KLKIDHGSDLLALYVDGGIKLNNTETIKIGDGTNNVGA--FVTGGSIFKNKGGITLTDSI 1171
Query: 214 ND 215
+
Sbjct: 1172 KN 1173
>gi|325915089|ref|ZP_08177417.1| pyridoxal phosphate enzyme, YggS family [Xanthomonas vesicatoria
ATCC 35937]
gi|325538701|gb|EGD10369.1| pyridoxal phosphate enzyme, YggS family [Xanthomonas vesicatoria
ATCC 35937]
Length = 285
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
I K G A + +A + + + +M + F Q S +++ A +
Sbjct: 181 IDDEDSKYGCAPDAIDRLADAIALQPRLQLRGLMAIPAPFPDQARRVSAFARMQDLFAQL 240
Query: 166 GKRSISLEVDG---GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+R +VD G+++ + AGA ++ VG++ F + + A
Sbjct: 241 QQR--HRQVDTLSMGMSAD-FAEAIAAGATMVRVGTALFGARAPAASA 285
>gi|325288414|ref|YP_004264595.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Syntrophobotulus glycolicus DSM 8271]
gi|324963815|gb|ADY54594.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Syntrophobotulus glycolicus DSM 8271]
Length = 289
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+VN G L I +++ A I R+I+ E GG+T NI+ + + G D++ VG
Sbjct: 201 SVNSGVDVIMLDNMNIEEMKTAVRSIAGRAIT-EASGGITEENIREIAETGVDVVSVG 257
>gi|227355683|ref|ZP_03840076.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
gi|227164002|gb|EEI48899.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
Length = 111
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNISFG 50
+E+ AG IH D+ D F P I+
Sbjct: 24 KELKAAYDAGHTFIHIDLSDAHFSPQITLF 53
>gi|17231011|ref|NP_487559.1| thiamin biosynthesis protein [Nostoc sp. PCC 7120]
gi|71153600|sp|Q8YRC9|THIOG_ANASP RecName: Full=Bifunctional protein thiO/thiG; Includes: RecName:
Full=Probable FAD-dependent glycine oxidase; Includes:
RecName: Full=Thiazole synthase
gi|17132652|dbj|BAB75218.1| thiamin biosynthesis protein [Nostoc sp. PCC 7120]
Length = 652
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM-TVNPGFGGQQLIESTI 155
P +L+ + K+ + +L ++++ +M +P GQ L +
Sbjct: 506 PDPIGTLQAAEQLVKEGFAVLPYINADPMLAKHLEDVGCATVMPLASPIGSGQGLKTTAN 565
Query: 156 PKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+I +I I + VD G+ ++ GAD L++ S+ + + A+ +N
Sbjct: 566 IQI-----IIENAKIPVVVDAGIGAPSEASQAMELGADALLINSAIALAQNPAAMAQAMN 620
>gi|332288697|ref|YP_004419549.1| pyridoxal biosynthesis lyase PdxS [Gallibacterium anatis UMN179]
gi|330431593|gb|AEC16652.1| pyridoxal biosynthesis lyase PdxS [Gallibacterium anatis UMN179]
Length = 295
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPADAALMMALGADGVFVGSGIFKSENPEKFAKAI 252
>gi|301098256|ref|XP_002898221.1| trans-2-enoyl-CoA reductase, putative [Phytophthora infestans
T30-4]
gi|262105284|gb|EEY63336.1| trans-2-enoyl-CoA reductase, putative [Phytophthora infestans
T30-4]
Length = 348
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 16/114 (14%)
Query: 96 SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV--IDEIDMILIMTVNPGFGGQQLIES 153
S + + I +A+NP T +L D + + D+++ N GQ +I
Sbjct: 121 SADVMKVSDKIKVEDA-ATLAVNPATAYRMLADFTTLSKGDVVIQNGANSAV-GQAVI-- 176
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV----VGSSFFNQ 203
Q AL G ++I++ D G ++ L GAD++ GS+ F +
Sbjct: 177 ------QLAALRGIKTINIIRDDGEYDETVEHLKSLGADIVCTADYAGSAKFKE 224
>gi|121712684|ref|XP_001273953.1| 5-proFAR isomerase [Aspergillus clavatus NRRL 1]
gi|119402106|gb|EAW12527.1| 5-proFAR isomerase [Aspergillus clavatus NRRL 1]
Length = 256
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
AK + L+V GG+ +N + + GAD +V+ S F
Sbjct: 66 EAAKESLRTWPGGLQVAGGINDKNAQYWIDQGADKVVITSFLF 108
>gi|89100963|ref|ZP_01173809.1| pyridoxine biosynthesis protein [Bacillus sp. NRRL B-14911]
gi|89084334|gb|EAR63489.1| pyridoxine biosynthesis protein [Bacillus sp. NRRL B-14911]
Length = 302
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F +A+ +
Sbjct: 221 GGVATPADAALMMELGADGVFVGSGIFKSDNPAKFARAI 259
>gi|193211950|ref|YP_001997903.1| nicotinate-nucleotide pyrophosphorylase [Chlorobaculum parvum NCIB
8327]
gi|193085427|gb|ACF10703.1| nicotinate-nucleotide pyrophosphorylase [Chlorobaculum parvum NCIB
8327]
Length = 297
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H +++ + ++ A K+ GV + ET V + +++ + + F ++
Sbjct: 179 HIDAAGSVDEAINRAKAYCKEHGVNVKIETEVRSISELVRACTCRPDIILLDNF----MV 234
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ +R KA G I LE G + N+ + G D +
Sbjct: 235 DDLAEAVRWVKA-NGYGDIRLEASGNINLHNVAEIALTGVDYI 276
>gi|182626054|ref|ZP_02953816.1| thiamine monophosphate synthase family protein [Clostridium
perfringens D str. JGS1721]
gi|177908666|gb|EDT71182.1| thiamine monophosphate synthase family protein [Clostridium
perfringens D str. JGS1721]
Length = 193
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I I++ K + R I+L GG+ N K ++ AGAD S F
Sbjct: 132 PKGIDFIKEIKEKVNCRVIAL---GGINELNFKEVLGAGADDFACMSLLFMSNNIKKSLD 188
Query: 212 RLNDL 216
L
Sbjct: 189 TFKAL 193
>gi|229154138|ref|ZP_04282263.1| Thiamine-phosphate pyrophosphorylase [Bacillus cereus ATCC 4342]
gi|228629418|gb|EEK86120.1| Thiamine-phosphate pyrophosphorylase [Bacillus cereus ATCC 4342]
Length = 219
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+I + GG++ N S+++AGAD + V S+
Sbjct: 167 TIPIVGIGGISIENAASVIEAGADGISVISAI 198
>gi|254512780|ref|ZP_05124846.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Rhodobacteraceae
bacterium KLH11]
gi|221532779|gb|EEE35774.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Rhodobacteraceae
bacterium KLH11]
Length = 201
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK-GEISYAKRLNDL 216
+ + ++ + S++ V GG N K + AGAD +GS+ + G A+R +
Sbjct: 134 LAALRPVLPEGSLAYAV-GGAGPDNFKDWLAAGADGFGIGSALYKPGMGAPEVAERARKI 192
Query: 217 KKS 219
+
Sbjct: 193 VAA 195
>gi|223937349|ref|ZP_03629254.1| putative PAS/PAC sensor protein [bacterium Ellin514]
gi|223893900|gb|EEF60356.1| putative PAS/PAC sensor protein [bacterium Ellin514]
Length = 337
Score = 36.3 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 14/70 (20%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL---EVDGGVTSRNIKSL 186
+ E D++L V PGFG I + LI ++ + + V G +
Sbjct: 48 LQEWDVVLCDHVIPGFGS----------IEALR-LISEKGLDIPLIIVSGAIGEETAVEA 96
Query: 187 VQAGADLLVV 196
++AGA V+
Sbjct: 97 MKAGAQDYVL 106
>gi|319956006|ref|YP_004167269.1| tryptophan synthase, alpha chain [Nitratifractor salsuginis DSM
16511]
gi|319418410|gb|ADV45520.1| tryptophan synthase, alpha chain [Nitratifractor salsuginis DSM
16511]
Length = 246
Score = 36.3 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 6/128 (4%)
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
+++ I +G + + I G I P + + +
Sbjct: 93 METFIAEAKASGVNGFIIPDLPYEEAQAYKPMIEEAGLNLIDFIAPTDTPERIAMIARDA 152
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGAD 192
L + G G E I Q + G GV K G D
Sbjct: 153 KKFLYLVAYAGITGSGQSEELSEVIAQIRKQTQTPVYV----GFGVNPDTAKE-KAKGVD 207
Query: 193 LLVVGSSF 200
++VGS+F
Sbjct: 208 GVIVGSAF 215
>gi|322419425|ref|YP_004198648.1| nicotinate-nucleotide pyrophosphorylase [Geobacter sp. M18]
gi|320125812|gb|ADW13372.1| nicotinate-nucleotide pyrophosphorylase [Geobacter sp. M18]
Length = 276
Score = 36.3 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ I ++R A + E L++V +D G L
Sbjct: 165 HIAAAGGIPEAVRAARAYIPH---TLKIEVETETLDEVKQALD--------AGADIIMLD 213
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
++ ++ +A +I KR++ +E GGV + I+S+ G D++ VG
Sbjct: 214 NMSLEQMTEAVQIINKRAL-VEASGGVNLKTIRSIALTGVDIISVG 258
>gi|310828919|ref|YP_003961276.1| hypothetical protein ELI_3352 [Eubacterium limosum KIST612]
gi|308740653|gb|ADO38313.1| hypothetical protein ELI_3352 [Eubacterium limosum KIST612]
Length = 217
Score = 35.9 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K++ I + GG++ N+ L + D + V S+ F Q + A+++ L
Sbjct: 153 LKSICSSVKIPVVAIGGISEENLLELSGSKVDGVAVISAVFAQPDTRAAAQKIRKL 208
>gi|169334253|ref|ZP_02861446.1| hypothetical protein ANASTE_00651 [Anaerofustis stercorihominis DSM
17244]
gi|169258970|gb|EDS72936.1| hypothetical protein ANASTE_00651 [Anaerofustis stercorihominis DSM
17244]
Length = 215
Score = 35.9 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLKK 218
K + SI + GG++ NI L D + VV S+ F ++ K L L K
Sbjct: 151 LKEICDNVSIPVVAIGGISKDNILKLKGTNVDGVAVV-SAIFASSDIVNDTKELLKLSK 208
>gi|77917957|ref|YP_355772.1| thiamine monophosphate synthase [Pelobacter carbinolicus DSM 2380]
gi|77544040|gb|ABA87602.1| thiamine monophosphate synthase [Pelobacter carbinolicus DSM 2380]
Length = 206
Score = 35.9 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ ++R + ++ S+ + GG+ N VQAGAD + V S+ S L
Sbjct: 142 SLDELRLVRHVV---SLPIVAIGGIHIGNAALAVQAGADAVAVISAVMQADDCKSTVCEL 198
Query: 214 N 214
+
Sbjct: 199 D 199
>gi|303238486|ref|ZP_07325020.1| thiamine-phosphate pyrophosphorylase [Acetivibrio cellulolyticus
CD2]
gi|302593884|gb|EFL63598.1| thiamine-phosphate pyrophosphorylase [Acetivibrio cellulolyticus
CD2]
Length = 222
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
KA+ +I + GG+ + NI L G D + V S+ F Q A+ L L
Sbjct: 151 LKAICNCVNIPVVAIGGIGAHNILELSGTGIDGVAVISAVFAQPDIRGAAEELLRL 206
>gi|229825636|ref|ZP_04451705.1| hypothetical protein GCWU000182_00998 [Abiotrophia defectiva ATCC
49176]
gi|229790199|gb|EEP26313.1| hypothetical protein GCWU000182_00998 [Abiotrophia defectiva ATCC
49176]
Length = 238
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 163 ALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSAL 221
+ K + +E+ GG+ T I+ + AG + +++G+ + + ++ D + +
Sbjct: 71 EICKKTGLKVEIGGGIRTEATIEKYINAGVNRIILGT---KAATDKEFLNKMTDKYREKI 127
Query: 222 AI 223
A+
Sbjct: 128 AV 129
>gi|153838459|ref|ZP_01991126.1| thiamine-phosphate pyrophosphorylase [Vibrio parahaemolyticus
AQ3810]
gi|149748135|gb|EDM58994.1| thiamine-phosphate pyrophosphorylase [Vibrio parahaemolyticus
AQ3810]
Length = 204
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I K + S+ + GG+ NI +L G L + S+ + + A+ L L
Sbjct: 144 IEGLKMALNTTSLPIVAIGGINETNIPALSATGVHGLALVSAICHAENPTKAAEYLLSL 202
>gi|313906602|ref|ZP_07839927.1| thiamine-phosphate pyrophosphorylase [Eubacterium cellulosolvens 6]
gi|313468563|gb|EFR63940.1| thiamine-phosphate pyrophosphorylase [Eubacterium cellulosolvens 6]
Length = 212
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 8/59 (13%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG----SSFFNQKGEISYAKRLND 215
+ + I + GG+T N+ L +G + G S+ F Q + L
Sbjct: 151 LREICQAVHIPVVAIGGITGENLGQLRGSG----IAGISVISAIFAQPDVRKATEELKK 205
>gi|296136797|ref|YP_003644039.1| thiamine-phosphate pyrophosphorylase [Thiomonas intermedia K12]
gi|295796919|gb|ADG31709.1| thiamine-phosphate pyrophosphorylase [Thiomonas intermedia K12]
Length = 220
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+A+ + L GG+ N ++ AGAD L
Sbjct: 156 LRAMRALTDLPLIAIGGIDLNNAAQVLAAGADGL 189
>gi|227529233|ref|ZP_03959282.1| thiamine-phosphate diphosphorylase [Lactobacillus vaginalis ATCC
49540]
gi|227350850|gb|EEJ41141.1| thiamine-phosphate diphosphorylase [Lactobacillus vaginalis ATCC
49540]
Length = 215
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG----SSFFNQKGEISYA 210
+ K+++ L +++ GG++ NI +++ G V G S N K
Sbjct: 155 LTKLKELNKLSTHPLVAI---GGLSLENIPEVLKTG----VAGLSMISLVLNSKNITETI 207
Query: 211 KRLNDLKK 218
+++ L K
Sbjct: 208 EKIKTLVK 215
>gi|153810953|ref|ZP_01963621.1| hypothetical protein RUMOBE_01343 [Ruminococcus obeum ATCC 29174]
gi|149832841|gb|EDM87924.1| hypothetical protein RUMOBE_01343 [Ruminococcus obeum ATCC 29174]
Length = 484
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 19/150 (12%)
Query: 70 MISSIDSHINIIADAGCDIITF-----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ S++ + + + A D+I H E +I R++R I V A
Sbjct: 224 ITSNVLARVEALVKANVDVIVIDSAHGHSE---NILRAVRQIKDAYPDLQVIAGNVATGA 280
Query: 125 ILEDVIDEIDMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+ +ID + + + PG G + I + + + I + DGG
Sbjct: 281 ATKALIDAGVDAVKVGIGPGSICTTRVVAGIGV--PQITAVMDCYEVANRYGIPIIADGG 338
Query: 178 VTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
+ +I + AGA++ ++GS F E
Sbjct: 339 IKYSGDITKAIAAGANVCMMGS-IFAGCDE 367
>gi|186475348|ref|YP_001856818.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia phymatum
STM815]
gi|184191807|gb|ACC69772.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia phymatum
STM815]
Length = 300
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
+A+N + I + + +++ L G L + +R A + R++ LEV
Sbjct: 207 IALNAGVSIQIEVETLGQLESALAH----GAQSVLLDNFSFDMMRDAVRITAGRAV-LEV 261
Query: 175 DGGVTSRNIKSLVQAGADLLVVGS 198
GGV I+ + + G D + VGS
Sbjct: 262 SGGVNLDTIRLIAETGVDRVSVGS 285
>gi|303240982|ref|ZP_07327492.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
gi|302591407|gb|EFL61145.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 467
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 12/84 (14%)
Query: 40 DGCFVPNIS-FGADVIRSLRSYSDSVFDCHLMISSIDSHINII----ADAGCDIITFHPE 94
D FV N + +I+ +V D D I G D T HP+
Sbjct: 59 DVKFVQNFTDIDDKMIKRANEEGITVKDL------ADRFIKEYFIDAKGLGIDEATVHPK 112
Query: 95 SSPHIRRSLRTIHAMGKKTGVAIN 118
++ +I + I + + G A N
Sbjct: 113 ATENIDAIIDLIKKLE-ENGFAYN 135
>gi|255534552|ref|YP_003094923.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
3519-10]
gi|255340748|gb|ACU06861.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
3519-10]
Length = 486
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 154 TIPKIRQAKALIGKRSISLEVDGG--VTSRNIKSLVQAGADLLVVG 197
+ KI + + + + + GG VT+ K L++AGA++L VG
Sbjct: 259 VLDKIVELRKNFPE--LDIV--GGNIVTAEAAKDLIEAGANILKVG 300
>gi|269118766|ref|YP_003306943.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Sebaldella
termitidis ATCC 33386]
gi|269118784|ref|YP_003306961.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Sebaldella
termitidis ATCC 33386]
gi|268612644|gb|ACZ07012.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Sebaldella
termitidis ATCC 33386]
gi|268612662|gb|ACZ07030.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Sebaldella
termitidis ATCC 33386]
Length = 212
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 11/138 (7%)
Query: 81 IADAGCDIITFHPESS-PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM 139
ADAG D +T ++ P ++ +L+ + + + E E + + +
Sbjct: 76 CADAGADWMTVICSATIPTMKAALKEVKDLQVELYGDWTFEHAKQWKEAGLSQA--VYHQ 133
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL--LVVG 197
+ + G+ E + KIR+ + + V GG+ +K G D+ + G
Sbjct: 134 SRDALLAGETWGEKDLNKIRKLVEM----GFKVSVTGGLEKETLKLFK--GIDVYTFIAG 187
Query: 198 SSFFNQKGEISYAKRLND 215
A+ +
Sbjct: 188 RGIREASDPAQAAREFKE 205
>gi|223939824|ref|ZP_03631694.1| thiamine-phosphate pyrophosphorylase [bacterium Ellin514]
gi|223891512|gb|EEF58003.1| thiamine-phosphate pyrophosphorylase [bacterium Ellin514]
Length = 212
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
T+ +R A A + ++ GG+ N+ ++ AGA + V S+ N
Sbjct: 149 PVTLDYVRWAAANVKIPWFAI---GGINLTNLDQVLAAGAQRICVVSAILNAPD 199
>gi|171316767|ref|ZP_02905979.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia ambifaria
MEX-5]
gi|171098117|gb|EDT42932.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia ambifaria
MEX-5]
Length = 337
Score = 35.9 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A++ PV + + + ++D L G L T+ +R+A + +++ L
Sbjct: 241 AAFALDSGVPVQVEVETLAQLDTALAH----GAQSVLLDNFTLDMMREAVRVAAGKAV-L 295
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 296 EVSGGVNFDTVRTFAETGVD 315
>gi|325526610|gb|EGD04155.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. TJI49]
Length = 270
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 9/51 (17%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS---ALAI 223
GG+ S + + AGA + V+ + E S + ++D++++ A+AI
Sbjct: 25 GGIGSETARRMAAAGAKVAVL------DRTEASCTEVVDDIRRAGGTAIAI 69
>gi|260596093|ref|YP_003208664.1| thiazole synthase [Cronobacter turicensis z3032]
gi|260215270|emb|CBA27185.1| Thiazole biosynthesis protein thiG [Cronobacter turicensis z3032]
Length = 256
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 12/138 (8%)
Query: 84 AGCDIIT--FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILI 138
G I HP++ + + T+ A K G + P + ++E +
Sbjct: 89 LGTHWIKLEIHPDARWLLPDPIETLRAAEKLVAQGFVVLPYCGADPVLCKRLEEAGCAAV 148
Query: 139 MTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVV 196
M + G Q L + +I +I + S+ + VD G+ + ++ GAD ++V
Sbjct: 149 MPLGAPIGSNQGLQTRALLEI-----IIAQASVPVVVDAGIGAPSHAAEALEMGADAVLV 203
Query: 197 GSSFFNQKGEISYAKRLN 214
++ + ++ A+
Sbjct: 204 NTAIAVARDPVAMARAFR 221
>gi|167769843|ref|ZP_02441896.1| hypothetical protein ANACOL_01177 [Anaerotruncus colihominis DSM
17241]
gi|167668204|gb|EDS12334.1| hypothetical protein ANACOL_01177 [Anaerotruncus colihominis DSM
17241]
Length = 155
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 177 GV-TSRNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLNDLKK 218
G+ T + K +AGAD + VGS+ + K + D K+
Sbjct: 110 GIHTPADAKMAREAGADGVFVGSAVLRLHDDPAAMTKMIQDFKR 153
>gi|152980710|ref|YP_001352008.1| thiamine-phosphate pyrophosphorylase [Janthinobacterium sp.
Marseille]
gi|229558550|sp|A6SUR1|THIE_JANMA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|151280787|gb|ABR89197.1| thiamine-phosphate pyrophosphorylase [Janthinobacterium sp.
Marseille]
Length = 207
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 174 VDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
V GG+T N LV GAD++ SS + + A+ L
Sbjct: 162 VIGGMTRDNSAPLVANGADMVAAISSVYLAGDPQAAARAFVSL 204
>gi|119512493|ref|ZP_01631573.1| thiazole synthase [Nodularia spumigena CCY9414]
gi|119462843|gb|EAW43800.1| thiazole synthase [Nodularia spumigena CCY9414]
Length = 657
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM-TVNPGFGGQQLIESTI 155
P +L+ + K+ + +L ++++ +M +P GQ L +
Sbjct: 510 PDPIGTLQAAEQLVKEGFAVLPYINADPMLAKRLEDVGCATVMPLASPIGSGQGLKTTAN 569
Query: 156 PKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+I +I +I + VD G+ ++ GAD L++ S+ + + A+ +N
Sbjct: 570 IQI-----IIENANIPVVVDAGIGAPSEAAQAMELGADALLINSAIALSQNPPAMAQAMN 624
>gi|156743793|ref|YP_001433922.1| photosystem I assembly BtpA [Roseiflexus castenholzii DSM 13941]
gi|156235121|gb|ABU59904.1| photosystem I assembly BtpA [Roseiflexus castenholzii DSM 13941]
Length = 283
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 155 IPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ K++QAKAL G R + + G G RNI + + A AD ++VGSS Q G I +
Sbjct: 215 LEKVQQAKALCGDRPLLI---GSGADERNIAAFMAA-ADGVIVGSSI-KQDGRIENPVEV 269
Query: 214 NDLKKSALAI 223
+++ A
Sbjct: 270 ERVRRFVAAA 279
>gi|298207344|ref|YP_003715523.1| PcrB-like protein [Croceibacter atlanticus HTCC2559]
gi|83849980|gb|EAP87848.1| PcrB-like protein [Croceibacter atlanticus HTCC2559]
Length = 236
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 10/137 (7%)
Query: 69 LMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAIL 126
L + + I A +I+ + E P + + P + + +
Sbjct: 98 LSGRNPEFLIEQHVKAIPKLISTNLEIIPTAYLLIDGGIKTAVQRVSNTKPMAQNNIDAI 157
Query: 127 ED--VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNI 183
+ + E ++ + G G +Q + I +A+ SI + V GG+ + I
Sbjct: 158 VNTALAAEFSGKKLIYLEAGSGAKQFVNPEI-----VRAVSRVVSIPIIVGGGLRDNNTI 212
Query: 184 KSLVQAGADLLVVGSSF 200
+ +AGA ++VVG++F
Sbjct: 213 AEIYKAGATMVVVGTAF 229
>gi|254227570|ref|ZP_04921002.1| thiamine-phosphate pyrophosphorylase [Vibrio sp. Ex25]
gi|262396167|ref|YP_003288020.1| thiamin-phosphate pyrophosphorylase [Vibrio sp. Ex25]
gi|151940182|gb|EDN59008.1| thiamine-phosphate pyrophosphorylase [Vibrio sp. Ex25]
gi|262339761|gb|ACY53555.1| thiamin-phosphate pyrophosphorylase [Vibrio sp. Ex25]
Length = 204
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I K + S+ + GG+ NI +L G L + S+ + + A+ L L
Sbjct: 144 IEGLKMALNTTSLPIVAIGGINETNIPALSATGVHGLALVSAICHAENPTKAAEYLLSL 202
>gi|327311968|ref|YP_004338865.1| tryptophan synthase subunit alpha [Thermoproteus uzoniensis 768-20]
gi|326948447|gb|AEA13553.1| tryptophan synthase, alpha subunit [Thermoproteus uzoniensis
768-20]
Length = 241
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 12/57 (21%)
Query: 175 DGGV---------TSRNIKSLVQAGADLLVVGSSFFN---QKGEISYAKRLNDLKKS 219
GG+ + ++L++AGAD LVVG++ + G + L++++++
Sbjct: 183 IGGIYLVAGFAIDSPDKARALIEAGADGLVVGTAAMRRLAEGGVKAAVDFLSEIRRA 239
>gi|289618845|emb|CBI54670.1| unnamed protein product [Sordaria macrospora]
Length = 371
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKR----SISLEVDG-GVTSRNI--KSLVQAGADLL 194
G G L + ++ + ++ +R +++ G G K + +AGAD++
Sbjct: 288 GLAGAPLHPLALGNVKTLRKMLDEREEKLGHRVQIIGVGGVLDTAGYKRMRKAGADVV 345
>gi|269216851|ref|ZP_06160705.1| ModD protein [Slackia exigua ATCC 700122]
gi|269129658|gb|EEZ60742.1| ModD protein [Slackia exigua ATCC 700122]
Length = 286
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+R+ +A+ +++ GG+ N + G D L ++ FN K I R+ L
Sbjct: 231 VRELRAI--DPRLTIIAAGGIDETNAAAYAATGVDGL-ATTAPFNAK-PIDVGVRMERLA 286
>gi|197285254|ref|YP_002151126.1| hypothetical protein PMI1395 [Proteus mirabilis HI4320]
gi|194682741|emb|CAR42948.1| hypothetical protein PMI1395 [Proteus mirabilis HI4320]
Length = 111
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNISFG 50
+E+ AG IH D+ D F P I+
Sbjct: 24 KELKAAYDAGHTFIHIDLSDAHFSPQITLF 53
>gi|167039225|ref|YP_001662210.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter sp. X514]
gi|300915514|ref|ZP_07132825.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter sp. X561]
gi|307723806|ref|YP_003903557.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter sp. X513]
gi|166853465|gb|ABY91874.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter sp. X514]
gi|300888412|gb|EFK83563.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter sp. X561]
gi|307580867|gb|ADN54266.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter sp. X513]
Length = 211
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 6/130 (4%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H +R I K GV+ T L+ D D + V F
Sbjct: 81 VHVGQEDLPADIVRKIIGRDKIVGVSAR--TVEEALKAQRDGADY---LGVGAVFKTPTK 135
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL-VQAGADLLVVGSSFFNQKGEISY 209
E+ I K + +I + GG+T N + +++G D + S+ F E +
Sbjct: 136 PEAEAIGIEGLKKIKEAVTIPVVAIGGITKDNAYEVMLKSGVDGISSVSAVFYGDIENNT 195
Query: 210 AKRLNDLKKS 219
K L +KK+
Sbjct: 196 RKLLEVIKKA 205
>gi|161831373|ref|YP_001596067.1| nicotinate-nucleotide pyrophosphorylase [Coxiella burnetii RSA 331]
gi|161763240|gb|ABX78882.1| nicotinate-nucleotide pyrophosphorylase [Coxiella burnetii RSA 331]
Length = 274
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 13/106 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H S + +++ A + + I E + E + + D+IL+
Sbjct: 166 HILSCGSLTEAIQKARASHPEKTLEIEVENLNELQEALAAKADIILL---------DNFD 216
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
TI K + I LE+ G V I + + G D + VG
Sbjct: 217 IDTIKKAVK----INNSQAKLEISGNVNLETIHEIAKTGVDYISVG 258
>gi|332158173|ref|YP_004423452.1| nicotinate-nucleotide pyrophosphorylase [Pyrococcus sp. NA2]
gi|331033636|gb|AEC51448.1| nicotinate-nucleotide pyrophosphorylase [Pyrococcus sp. NA2]
Length = 275
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ + K L + + +EV GG+T NI+ + D++ +G
Sbjct: 219 VEELKRLGLRDRVKIEVSGGITPENIEEYAKLDIDVISLG 258
>gi|327402205|ref|YP_004343043.1| 2-nitropropane dioxygenase NPD [Fluviicola taffensis DSM 16823]
gi|327317713|gb|AEA42205.1| 2-nitropropane dioxygenase NPD [Fluviicola taffensis DSM 16823]
Length = 316
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 64/167 (38%), Gaps = 16/167 (9%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDI-ITFHPESSPHIRRSLRTIHAMGKK 112
++ +++ +L++++ + ++ + + F S ++ + G K
Sbjct: 57 LKRMKTSVKGPIGINLIVNASNIYMEEQLRICVEEGVDFFITSLGSPKKVIEVAREKGIK 116
Query: 113 TGVAINPETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
T V + V D D ++ + G ++ + I+ K +++S
Sbjct: 117 ---VFCDVTDVEYAKKVADLGADAVIAVNNRAGGHAGKIDPKAL--IQTIK-----KAVS 166
Query: 172 LEVD--GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ V GGV T + + L+ AGAD +GS F E +K
Sbjct: 167 IPVISAGGVGTKKEMDELIAAGADGFSIGS-IFIASNEAGVSKEYKQ 212
>gi|299542088|ref|ZP_07052404.1| pyridoxal biosynthesis lyase PdxS [Lysinibacillus fusiformis ZC1]
gi|298725403|gb|EFI66051.1| pyridoxal biosynthesis lyase PdxS [Lysinibacillus fusiformis ZC1]
Length = 294
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +A+ +
Sbjct: 213 GGVATPADAALMMELGADGVFVGSGIFKSENPEKFARAI 251
>gi|302658615|ref|XP_003021009.1| hypothetical protein TRV_04874 [Trichophyton verrucosum HKI 0517]
gi|291184884|gb|EFE40391.1| hypothetical protein TRV_04874 [Trichophyton verrucosum HKI 0517]
Length = 291
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I KA + + GG+T +N + + AGA+ +VV S F RL +
Sbjct: 69 IEALKAWPD--GLHIA--GGITDKNAQYWLDAGAEKVVVTSYLF--PDAQFSIDRLQSIL 122
Query: 218 KS 219
+
Sbjct: 123 AA 124
>gi|78044425|ref|YP_361485.1| pyridoxal biosynthesis lyase PdxS [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996540|gb|ABB15439.1| pyridoxine biosynthesis protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 294
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + ++Q GAD + VGS F K + AK +
Sbjct: 213 GGIATPADAALMMQLGADGIFVGSGIFKSKDPVGRAKAI 251
>gi|113460914|ref|YP_718981.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Haemophilus somnus
129PT]
gi|170717465|ref|YP_001784562.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Haemophilus somnus
2336]
gi|112822957|gb|ABI25046.1| 3-keto-L-gulonate 6-phosphate decarboxylase [Haemophilus somnus
129PT]
gi|168825594|gb|ACA30965.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Haemophilus somnus
2336]
Length = 215
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 48/139 (34%), Gaps = 11/139 (7%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTI-----HAMGKKTGVAINPETPVAILEDVIDE 132
+ +AG D IT + S + I + + + A ++ +
Sbjct: 73 AEMAFNAGADWITVSAAAHIATIESCKKIADYYQKEIQIEIYGNWTFDDAQAWVD--LGI 130
Query: 133 IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I + G+ E + +++ + +SL + GG+ NI A
Sbjct: 131 NQAIYHRARDAEIAGKGWTEDDLVTMKKLSKM----GLSLSITGGIVPENIYLFKDINAK 186
Query: 193 LLVVGSSFFNQKGEISYAK 211
+ G +F +KG+ + K
Sbjct: 187 AFIAGRAFTGEKGKFTVEK 205
>gi|294055702|ref|YP_003549360.1| glycosyl transferase family 2 [Coraliomargarita akajimensis DSM
45221]
gi|293615035|gb|ADE55190.1| glycosyl transferase family 2 [Coraliomargarita akajimensis DSM
45221]
Length = 246
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ P + + T+ IR+A + R + VD + GAD +V
Sbjct: 6 IIIPAYNEAAELPETLAAIRKAMQSVEVRGELIVVDNNSNDDTAEVARAHGADQVV 61
>gi|262278248|ref|ZP_06056033.1| thiamine monophosphate synthase [Acinetobacter calcoaceticus
RUH2202]
gi|262258599|gb|EEY77332.1| thiamine monophosphate synthase [Acinetobacter calcoaceticus
RUH2202]
Length = 203
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGAD 175
>gi|229009256|ref|ZP_04166550.1| thiamine-phosphate pyrophosphorylase [Bacillus mycoides Rock1-4]
gi|228752013|gb|EEM01746.1| thiamine-phosphate pyrophosphorylase [Bacillus mycoides Rock1-4]
Length = 70
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLL 194
+I + GG+T N S+++AGAD +
Sbjct: 16 TIPIVGIGGITVENAASVIEAGADGV 41
>gi|308802476|ref|XP_003078551.1| putative indole-3-glycerol phosphate lyase (ISS) [Ostreococcus
tauri]
gi|116057004|emb|CAL51431.1| putative indole-3-glycerol phosphate lyase (ISS) [Ostreococcus
tauri]
Length = 297
Score = 35.9 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 119 PETPVAILEDVIDEI-DMILIMTVNPGFGGQQLIESTIPK-IRQAKALIGKRSISLEVDG 176
P TPV + + + +++V G Q + S + + + +A+ K + V G
Sbjct: 186 PTTPVERAKKIAQATKGFVYLVSVTGVTGVQTQVASRVESLVEELRAVTDKP---IAV-G 241
Query: 177 -GVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR-LNDLKKSALAI 223
GV+ + K +V GAD ++VGS+ GE + L LK A I
Sbjct: 242 FGVSQAAQAKQIVDWGADGVIVGSALVRALGEAKTPEEGLAALKAKADEI 291
>gi|329848775|ref|ZP_08263803.1| nicotinate-nucleotide diphosphorylase carboxylating [Asticcacaulis
biprosthecum C19]
gi|328843838|gb|EGF93407.1| nicotinate-nucleotide diphosphorylase carboxylating [Asticcacaulis
biprosthecum C19]
Length = 282
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+I +A L ++I LE GGV ++++ +AG D++ VG
Sbjct: 223 FSIDMYAEAVKLAAGKTI-LEASGGVNLDTVRAIAEAGVDVISVG 266
>gi|271502024|ref|YP_003335050.1| nicotinate-nucleotide pyrophosphorylase [Dickeya dadantii Ech586]
gi|270345579|gb|ACZ78344.1| nicotinate-nucleotide pyrophosphorylase [Dickeya dadantii Ech586]
Length = 296
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
+ PV + + +DE+ L G L T+ IR+A L R++ LEV G
Sbjct: 205 LRSNVPVEVEVETLDELQQAL----GAGADIIMLDNFTLDAIREAVTLTDGRAL-LEVSG 259
Query: 177 GVTSRNIKSLVQAGADLLVVG 197
VT + + G D + VG
Sbjct: 260 NVTLQTLPDYAATGVDYISVG 280
>gi|313116995|ref|YP_004038119.1| thiamine-phosphate diphosphorylase [Halogeometricum borinquense DSM
11551]
gi|312294947|gb|ADQ68983.1| thiamine-phosphate diphosphorylase [Halogeometricum borinquense DSM
11551]
Length = 214
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 169 SISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLND 215
I + GG+ + N +V AG A + VV ++ + + ++L
Sbjct: 159 DIPIVGIGGINADNATEVVNAGAAGVAVV-TTITDADDPAAATQQLRQ 205
>gi|198275926|ref|ZP_03208457.1| hypothetical protein BACPLE_02109 [Bacteroides plebeius DSM 17135]
gi|198271555|gb|EDY95825.1| hypothetical protein BACPLE_02109 [Bacteroides plebeius DSM 17135]
Length = 284
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + + I +++ K G + E V +++ +D+ G L
Sbjct: 171 HVDFAGGIDKAITRAKEYCKAKGKDLKIEIEVRNFDELQQVLDL-------GGVDRIMLD 223
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
T R+A ++G R + LE GG+T ++ + G D + VG
Sbjct: 224 NFTPENTRKAVEMVGGR-VELESSGGITFDTLRDYAECGVDYISVG 268
>gi|170697692|ref|ZP_02888780.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia ambifaria
IOP40-10]
gi|170137440|gb|EDT05680.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia ambifaria
IOP40-10]
Length = 337
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A++ PV + + + ++D L G L T+ +R+A + +++ L
Sbjct: 241 AAFALDSGVPVQVEVETLAQLDTALAH----GAQSVLLDNFTLDMMREAVRVAAGKAV-L 295
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 296 EVSGGVNFDTVRTFAETGVD 315
>gi|168215506|ref|ZP_02641131.1| FMN-dependent dehydrogenase [Clostridium perfringens NCTC 8239]
gi|182382382|gb|EDT79861.1| FMN-dependent dehydrogenase [Clostridium perfringens NCTC 8239]
Length = 340
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Query: 101 RSLRTIHAM---GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
++L I + K + TP V +D I++ Q ++
Sbjct: 192 KNLEEIKELVNSTKLPFILKGIMTPDEAELAVEAGVDAIVVSNHGGRVLDQT--PASCEV 249
Query: 158 IRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVG----SSFF--NQKGEISYA 210
+++ A + + + + VDGGV T +I ++ GAD +++G ++ F KG Y
Sbjct: 250 LKEIAARVKGK-VKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYV 308
Query: 211 KRLNDLKKSAL 221
L KSA+
Sbjct: 309 NSLKGELKSAM 319
>gi|110802455|ref|YP_699158.1| hydroxyacid oxidase 2 [Clostridium perfringens SM101]
gi|110682956|gb|ABG86326.1| FMN-dependent dehydrogenase [Clostridium perfringens SM101]
Length = 340
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Query: 101 RSLRTIHAM---GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
++L I + K + TP V +D I++ Q ++
Sbjct: 192 KNLEEIKELVNSTKLPFILKGIMTPDEAELAVEAGVDAIVVSNHGGRVLDQT--PASCEV 249
Query: 158 IRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVG----SSFF--NQKGEISYA 210
+++ A + + + + VDGGV T +I ++ GAD +++G ++ F KG Y
Sbjct: 250 LKEIAARVKGK-VKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYV 308
Query: 211 KRLNDLKKSAL 221
L KSA+
Sbjct: 309 NSLKGELKSAM 319
>gi|134299767|ref|YP_001113263.1| metallophosphoesterase [Desulfotomaculum reducens MI-1]
gi|134052467|gb|ABO50438.1| metallophosphoesterase [Desulfotomaculum reducens MI-1]
Length = 259
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
G+T K L G D+ +G+ +N+K I+Y ++ + + A
Sbjct: 46 GITKEIAKQLFATGVDVFTMGNHVWNKKEIIAYIEKERKIIRPA 89
>gi|127514355|ref|YP_001095552.1| patatin [Shewanella loihica PV-4]
gi|126639650|gb|ABO25293.1| Patatin [Shewanella loihica PV-4]
Length = 737
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 167 KRSISLEVDGGVTSRNIK-SLVQA-GADLLVV---GSSFFNQKGEISYAKRLNDL 216
+ + VDGG+ + N+ +V+A GAD+++ GSS + S LN L
Sbjct: 199 QYKGRIIVDGGI-ANNMPVDVVKAMGADIVIAVDIGSSLVKRDQLESTVAVLNQL 252
>gi|86145800|ref|ZP_01064129.1| thiamine-phosphate diphosphorylase [Vibrio sp. MED222]
gi|85836499|gb|EAQ54628.1| thiamine-phosphate diphosphorylase [Vibrio sp. MED222]
Length = 205
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 9/65 (13%)
Query: 161 AKALIGKRSIS---------LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
K G I + GG+ NI LV++G L + S+ + + +
Sbjct: 138 LKKHWGYDGIKMALETTKLPIVGIGGINESNIPQLVESGIHGLALVSAICHAEDPKQATQ 197
Query: 212 RLNDL 216
L L
Sbjct: 198 DLLAL 202
>gi|148839476|sp|Q0A5D2|HIS4_ALHEH RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
Length = 248
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N G+ + I +I + ++V GG+ I+ +AG D L
Sbjct: 47 LHLVDLNGAVAGKPVNAEIIHRIAT-----RYPDLRIQVGGGIRDLDTIRGYREAGVDDL 101
Query: 195 VVGS 198
++G+
Sbjct: 102 IIGT 105
>gi|94496489|ref|ZP_01303066.1| thiamine-phosphate pyrophosphorylase [Sphingomonas sp. SKA58]
gi|94424235|gb|EAT09259.1| thiamine-phosphate pyrophosphorylase [Sphingomonas sp. SKA58]
Length = 260
Score = 35.9 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 175 DGGVTSRNIKSLVQAGADLL-VVGSSFFNQK 204
GG+T+ N LV AGAD L V G + +N
Sbjct: 208 IGGITADNAAPLVAAGADFLAVSG-AVWNHP 237
>gi|326468566|gb|EGD92575.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Trichophyton tonsurans CBS 112818]
gi|326479953|gb|EGE03963.1| 5-proFAR isomerase [Trichophyton equinum CBS 127.97]
Length = 258
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
I KA + + GG+T +N + + AGA+ +VV S F RL +
Sbjct: 69 IEALKAWPD--GLHIA--GGITDKNAQYWLDAGAEKVVVTSYLF--PDARFSIDRLQSIL 122
Query: 218 KS 219
+
Sbjct: 123 AA 124
>gi|311108986|ref|YP_003981839.1| KDPG and KHG aldolase family protein [Achromobacter xylosoxidans
A8]
gi|310763675|gb|ADP19124.1| KDPG and KHG aldolase family protein [Achromobacter xylosoxidans
A8]
Length = 217
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFN 202
GG+T NI QAGA +GS+ +
Sbjct: 161 GGITPDNIAIYAQAGASGFGLGSALYK 187
>gi|282900945|ref|ZP_06308878.1| Nicotinate-nucleotide pyrophosphorylase [Cylindrospermopsis
raciborskii CS-505]
gi|281194036|gb|EFA69000.1| Nicotinate-nucleotide pyrophosphorylase [Cylindrospermopsis
raciborskii CS-505]
Length = 288
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETP-VAILEDVID---EIDMILIMTVNPGFGG 147
H ++ I ++++ + + ++I ET + +E+ + EI M+ M+++
Sbjct: 176 HIVAAGSITKAIQQVRSQVPYP-LSIEVETEAIEQVEEALQCQAEIIMLDNMSLD----- 229
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
L+ + IRQ + + +E G ++ I+S+ Q G D + S+
Sbjct: 230 --LMTQAVSLIRQ-----QDKRVKIEASGNISLDTIRSVAQVGVD-FISSSA 273
>gi|253699424|ref|YP_003020613.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. M21]
gi|251774274|gb|ACT16855.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. M21]
Length = 489
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 14/137 (10%)
Query: 73 SIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
+D+ I+ + AG D++ T H S + ++ I + + E +
Sbjct: 229 DVDARIDALMKAGVDVVVIDTAHG-HSQGVLDTIARIKSDFPGLELVAGNIATADAAEAL 287
Query: 130 IDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR- 181
I + + + PG G + I I + + K I L DGG+
Sbjct: 288 IKAGVDAIKVGIGPGSICTTRVVAGIGV--PQITAIAECSRIAKKHGIPLIADGGIKYSG 345
Query: 182 NIKSLVQAGADLLVVGS 198
++ V AGAD++++GS
Sbjct: 346 DLTKAVAAGADVIMIGS 362
>gi|168214911|ref|ZP_02640536.1| FMN-dependent dehydrogenase [Clostridium perfringens CPE str.
F4969]
gi|182626134|ref|ZP_02953894.1| FMN-dependent dehydrogenase [Clostridium perfringens D str.
JGS1721]
gi|170713650|gb|EDT25832.1| FMN-dependent dehydrogenase [Clostridium perfringens CPE str.
F4969]
gi|177908571|gb|EDT71096.1| FMN-dependent dehydrogenase [Clostridium perfringens D str.
JGS1721]
Length = 340
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Query: 101 RSLRTIHAM---GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPK 157
++L I + K + TP V +D I++ Q ++
Sbjct: 192 KNLEEIKELVNSTKLPFILKGIMTPDEAELAVEAGVDAIVVSNHGGRVLDQT--PASCEV 249
Query: 158 IRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVG----SSFF--NQKGEISYA 210
+++ A + + + + VDGGV T +I ++ GAD +++G ++ F KG Y
Sbjct: 250 LKEIAARVKGK-VKILVDGGVRTGVDILKMIALGADCVLIGRPFITATFADGAKGVEEYV 308
Query: 211 KRLNDLKKSAL 221
L KSA+
Sbjct: 309 NSLKGELKSAM 319
>gi|295705086|ref|YP_003598161.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium DSM 319]
gi|294802745|gb|ADF39811.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium DSM 319]
Length = 211
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I + Q+ ++ +I + + GG+ + SL+Q AD+ ++G
Sbjct: 128 IFCHHISKDEQEKEGKSLSQIN-LRQYFHS-DAQIAAAGGINPASAASLLQMKADVAIIG 185
Query: 198 SSFFNQKGEISYAKRLNDL 216
S+ + DL
Sbjct: 186 SAITKSADVAKASAEFQDL 204
>gi|294651833|ref|ZP_06729126.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
haemolyticus ATCC 19194]
gi|292822264|gb|EFF81174.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
haemolyticus ATCC 19194]
Length = 243
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA + ++E + ++ +N F G + + + I +A + + +++ GG+
Sbjct: 30 DDPVATAQHWVNEGARRLHLVDLNGAFAGTPIHKPVVEAIARA-----QPELPIQIGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ + AG +++G+
Sbjct: 85 RSLETIEHYLDAGVTFVIIGT 105
>gi|289620125|emb|CBI53569.1| unnamed protein product [Sordaria macrospora]
Length = 257
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 14/115 (12%)
Query: 88 IITFHPESSPHIRR-SLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG 146
I H I +L + + K V+ +P A L +E+ ++ + PG
Sbjct: 7 CIDLHAGQVKQIVGGTLDSATSELKTNFVSPHPPAYFAKL-YRDNELTGAHVIMLGPGNK 65
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
L KA G L+V GG+T N + V+AGA+ +++ S F
Sbjct: 66 EAALES--------LKAWPG----VLQVGGGITDGNAREWVEAGAEKVIITSYLF 108
>gi|225568860|ref|ZP_03777885.1| hypothetical protein CLOHYLEM_04939 [Clostridium hylemonae DSM
15053]
gi|225162359|gb|EEG74978.1| hypothetical protein CLOHYLEM_04939 [Clostridium hylemonae DSM
15053]
Length = 256
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+QA + +G L++ GG+++ N + + GA ++V S F G I + RL +LK+
Sbjct: 72 QQAVSALGAYPGGLQIGGGISAANAEEYIGLGASHVIVTSYVFK-DGRIRW-DRLGELKR 129
Query: 219 S 219
+
Sbjct: 130 A 130
>gi|254168386|ref|ZP_04875231.1| thiamine-phosphate pyrophosphorylase [Aciduliprofundum boonei T469]
gi|289595794|ref|YP_003482490.1| thiamine-phosphate pyrophosphorylase [Aciduliprofundum boonei T469]
gi|197622667|gb|EDY35237.1| thiamine-phosphate pyrophosphorylase [Aciduliprofundum boonei T469]
gi|289533581|gb|ADD07928.1| thiamine-phosphate pyrophosphorylase [Aciduliprofundum boonei T469]
Length = 205
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 25/56 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + ++ I + GG+ N+++++ G D + V SS + +R+
Sbjct: 143 LENLRRIVESVRIPVVAIGGINIENVRNVLSTGVDGIAVISSILVAENPKEATRRM 198
>gi|167750983|ref|ZP_02423110.1| hypothetical protein EUBSIR_01968 [Eubacterium siraeum DSM 15702]
gi|167656162|gb|EDS00292.1| hypothetical protein EUBSIR_01968 [Eubacterium siraeum DSM 15702]
Length = 254
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEV-------DG-GVTSRNIKSLVQAGADLLVVGS 198
GQ+ + K+ K + +I + DG G+T K L+++GAD++ G+
Sbjct: 11 GQKSCANLREKLPLLKK---EYNIDTVIVNGENSADGNGITPVTAKYLLESGADVITTGN 67
Query: 199 SFFNQKGEISYAKR 212
F +K ++ +
Sbjct: 68 HCFRRKEMDAFYET 81
>gi|170724693|ref|YP_001758719.1| patatin [Shewanella woodyi ATCC 51908]
gi|169810040|gb|ACA84624.1| Patatin [Shewanella woodyi ATCC 51908]
Length = 735
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 167 KRSISLEVDGGVTSRNIK-SLVQA-GADLLVV---GSSFFNQKGEISYAKRLNDL 216
+ L VDGG+ + N+ +V+A GAD+++ GSS ++ S LN L
Sbjct: 199 EYEGKLLVDGGI-ANNMPVDVVKALGADIVIAVDIGSSLVKKEALDSTVAVLNQL 252
>gi|52548489|gb|AAU82338.1| glutamate synthase subunit alpha [uncultured archaeon GZfos14B8]
Length = 218
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 15/120 (12%)
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVAI----LEDVIDEIDMILIMTVNPGFGGQQL 150
S ++ + I + V++ TP + + ++I + G G
Sbjct: 19 SVEDHKKHVDWIKEINPDAIVSVKVSTPTDVDMVAVGSYYAGANIIHLDGSYGGTGAAPD 78
Query: 151 I---------ESTIPKIRQ-AKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSS 199
I E IPK+ + K + ++L GG+ T+ ++ + GAD +V+G++
Sbjct: 79 IAKKNIAMPIEYAIPKVHEFLKEQGMRDKMTLIASGGIRTAHDVAKAIALGADGVVIGTA 138
>gi|301645754|ref|ZP_07245675.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 146-1]
gi|307140682|ref|ZP_07500038.1| thiazole synthase [Escherichia coli H736]
gi|331644726|ref|ZP_08345844.1| thiazole biosynthesis protein ThiG [Escherichia coli H736]
gi|301076003|gb|EFK90809.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 146-1]
gi|315617354|gb|EFU97960.1| thiazole biosynthesis protein thiG [Escherichia coli 3431]
gi|331036026|gb|EGI08263.1| thiazole biosynthesis protein ThiG [Escherichia coli H736]
Length = 256
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILE-DVIDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKCLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|194018071|ref|ZP_03056676.1| pyridoxine biosynthesis protein [Bacillus pumilus ATCC 7061]
gi|194010263|gb|EDW19840.1| pyridoxine biosynthesis protein [Bacillus pumilus ATCC 7061]
Length = 294
Score = 35.9 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|332521079|ref|ZP_08397537.1| inosine-5'-monophosphate dehydrogenase [Lacinutrix algicola
5H-3-7-4]
gi|332043172|gb|EGI79369.1| inosine-5'-monophosphate dehydrogenase [Lacinutrix algicola
5H-3-7-4]
Length = 496
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 78 INIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ +AG D I T H + + L+ + + K V + + +++
Sbjct: 243 AEALVNAGVDAIIIDTAHG-HTKGVVAVLKEVKSKFPKLEVVVGNIATAEAAKYLVEAGA 301
Query: 135 MILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSL 186
+ + + PG G + + I + + DGG+ + +I
Sbjct: 302 DAVKVGIGPGSICTTRVVAGVGF--PQFSAVLEVANAIKGSGVPVIADGGIRYTGDIPKA 359
Query: 187 VQAGADLLVVGS 198
+ AGAD +++GS
Sbjct: 360 IAAGADTVMLGS 371
>gi|298162137|gb|ADI59523.1| CorA [Corallococcus coralloides]
Length = 763
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 60/180 (33%), Gaps = 30/180 (16%)
Query: 49 FGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
FG +++ L L + I A ++ R + TI
Sbjct: 383 FGMNLLHDLNRPETEDALVDLFLQRGIRFIEASAFMQMTPALVRYRATGLRREADGTITR 442
Query: 109 MGKKTGVAINPETPVAILED----VIDE-----------------IDMILIMTVNPGFGG 147
+ + G PE + L ++++ + M +TV GG
Sbjct: 443 LHRVVGKVSRPEVAQSFLSPAPERLLEQLVAARKLTPEQAQLARAVPMADALTVEADSGG 502
Query: 148 Q-------QLIESTIP-KIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGS 198
L+ + + + R A+AL G + L GG+ T + + GAD +V GS
Sbjct: 503 HTDQGVAFALLPAMMSLRDRLARALPGGPRVHLGAAGGIGTPQAAAAAFMMGADYIVTGS 562
>gi|166713289|ref|ZP_02244496.1| thiamine-phosphate pyrophosphorylase [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 207
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 22/56 (39%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++ GG+ + +LV AGADL+ V S + ++ +
Sbjct: 148 ALLQQSAELHLARVAIGGIAPAQVPALVSAGADLIAVVSGVYAAPDPVAAVQAYRA 203
>gi|326802800|ref|YP_004320618.1| 3-hexulose-6-phosphate synthase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650772|gb|AEA00955.1| 3-hexulose-6-phosphate synthase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 211
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 78 INIIADAGCDIITF-HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
DAG D +T + I+ ++ K V + T +A ++E+ +
Sbjct: 72 AKETFDAGADYVTVLGVTDNLTIKDVVKAAKEANAKVMVDMITITDIAKRVAEVEELG-V 130
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
++ V+ G Q + + + + + + V GG+ + +Q +++V
Sbjct: 131 DVVAVHTGVDAQAAGRTPLEDLAEMSKHVD--NTVTAVAGGIKVDTVADYMQYNPQIIIV 188
Query: 197 GSSFFNQKGEISYAKRLNDLKKS 219
G + + AK L + ++
Sbjct: 189 GGGILHADDPVQAAKELKEQMEA 211
>gi|317405733|gb|EFV86029.1| 2-keto-3-deoxy-phosphogalactonate aldolase [Achromobacter
xylosoxidans C54]
Length = 217
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 21/134 (15%)
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILED 128
+ D + I DAG ++I L + A K G+A P TP
Sbjct: 73 VLDPDD-VARIKDAGGELIVM-------PHSDLAVVRAA-KAAGLASCPGVATPTEAFAA 123
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ D +L M F +QL + + R + I+L GG+T N+ + Q
Sbjct: 124 LAAGAD-VLKM-----FPAEQLGPAVLKAWRAV----MRPPIALVPVGGITPDNLSTYAQ 173
Query: 189 AGADLLVVGSSFFN 202
AGA +GS+ +
Sbjct: 174 AGASGFGLGSALYK 187
>gi|307293275|ref|ZP_07573121.1| thiamine-phosphate pyrophosphorylase [Sphingobium chlorophenolicum
L-1]
gi|306881341|gb|EFN12557.1| thiamine-phosphate pyrophosphorylase [Sphingobium chlorophenolicum
L-1]
Length = 230
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 175 DGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISY 209
GG+T+ N LV+AGAD L V G + +N
Sbjct: 184 IGGITADNAAPLVKAGADFLAVSG-AVWNHPEGPRA 218
>gi|304439996|ref|ZP_07399889.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304371488|gb|EFM25101.1| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 351
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 27/188 (14%)
Query: 44 VPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSL 103
V I G +++S ++++ I + + I + DAGCDII F + ++
Sbjct: 12 VGGIKIGNPHPITIQSMTNTIT---CDIENTVAQIKKLEDAGCDIIRF-AVNDFDDAEAI 67
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I +A +E +D + I NPG G++ K+++
Sbjct: 68 PKIKEKINIPTIADIQYDYRLAVEAAKHGVDGLRI---NPGNIGERW------KVKEVVE 118
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQ---AGADL--LVVGSSFFNQKGEISYAKRL--NDL 216
+R IS+ V GV S +I + +G ++ LV S+ E++Y + L D+
Sbjct: 119 AAKERGISIRV--GVNSGSISQEILDKFSGVNVDSLV-ESAL----SEVNYLESLGFKDI 171
Query: 217 KKSALAID 224
K S A D
Sbjct: 172 KVSLKASD 179
>gi|282163790|ref|YP_003356175.1| nicotinate-nucleotide pyrophosphorylase [carboxylating]
[Methanocella paludicola SANAE]
gi|282156104|dbj|BAI61192.1| nicotinate-nucleotide pyrophosphorylase [carboxylating]
[Methanocella paludicola SANAE]
Length = 270
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Query: 104 RTIHAMGKKTGVAINPETPVAILEDV--IDEIDMILIMTVNPGFGGQQLIESTIPKIRQA 161
I K E V LED +IM N + + I K +
Sbjct: 166 NAIREAKKVASFTKKIEVEVESLEDAEKAARAGADIIMFDN-------MKPAMIKKGVKI 218
Query: 162 KALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ +R I LE GG+T NI + G D++ +G
Sbjct: 219 VKSVDER-ILLEASGGITLSNISEYAKTGVDVISLG 253
>gi|219851675|ref|YP_002466107.1| bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate
synthase [Methanosphaerula palustris E1-9c]
gi|254788623|sp|B8GGX9|FAEHP_METPE RecName: Full=Bifunctional enzyme fae/hps; Includes: RecName:
Full=Formaldehyde-activating enzyme; Short=Fae;
Includes: RecName: Full=3-hexulose-6-phosphate synthase;
Short=HPS; AltName:
Full=D-arabino-3-hexulose-6-phosphate formaldehyde lyase
gi|219545934|gb|ACL16384.1| formaldehyde-activating enzyme [Methanosphaerula palustris E1-9c]
Length = 393
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
GGV +K + +GAD+LVVG + K
Sbjct: 338 GGVRVEVVKEALASGADILVVGRAITASKD 367
>gi|162138357|ref|YP_542789.2| thiazole synthase [Escherichia coli UTI89]
gi|162317561|ref|YP_859576.2| thiazole synthase [Escherichia coli APEC O1]
gi|218561056|ref|YP_002393969.1| thiazole synthase [Escherichia coli S88]
gi|226703898|sp|B7MIX6|THIG_ECO45 RecName: Full=Thiazole synthase
gi|218367825|emb|CAR05620.1| thiamin biosynthesis ThiGH complex subunit [Escherichia coli S88]
gi|222035701|emb|CAP78446.1| Thiazole biosynthesis protein thiG [Escherichia coli LF82]
gi|294494051|gb|ADE92807.1| thiazole biosynthesis protein ThiG [Escherichia coli IHE3034]
gi|307628393|gb|ADN72697.1| thiazole synthase [Escherichia coli UM146]
gi|312948564|gb|ADR29391.1| thiazole synthase [Escherichia coli O83:H1 str. NRG 857C]
gi|315288335|gb|EFU47734.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 110-3]
gi|323948838|gb|EGB44735.1| thiazole biosynthesis protein ThiG [Escherichia coli H252]
gi|323953797|gb|EGB49604.1| thiazole biosynthesis protein ThiG [Escherichia coli H263]
Length = 256
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A K G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAEKLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|91074377|gb|ABE09258.1| thiazole biosynthesis protein ThiG [Escherichia coli UTI89]
Length = 261
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A K G + P + ++E+ +M + G
Sbjct: 103 IHPDARWLLPDPIETLKAAEKLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 162
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 163 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 217
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 218 PVNMAKAFRLAVEAGL 233
>gi|67924268|ref|ZP_00517705.1| Nicotinate-nucleotide pyrophosphorylase [Crocosphaera watsonii WH
8501]
gi|67853883|gb|EAM49205.1| Nicotinate-nucleotide pyrophosphorylase [Crocosphaera watsonii WH
8501]
Length = 233
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H +++ I+ ++++I T +++ + I+++ +L+
Sbjct: 121 HIKAAGGIQGAIQSIRKTIPYPLTIEVETTTFDEVKEALKYGADIIML----DNMNLELM 176
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ ++ IR+ + I +E G +T N++ + G D +
Sbjct: 177 KESVTYIRR-----ENKQIKIEASGNITLDNLRQVALTGVDYI 214
>gi|291616289|ref|YP_003519031.1| NadC [Pantoea ananatis LMG 20103]
gi|291151319|gb|ADD75903.1| NadC [Pantoea ananatis LMG 20103]
Length = 304
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P+ PV + + + E+ L + + L T+ ++R+A + R++ LEV G V
Sbjct: 213 PDVPVEVEVESLKELQDALAASADI----VMLDNFTLDEMREAVKITEGRAL-LEVSGNV 267
Query: 179 TSRNIKSLVQAGADLLVVG 197
T I+ + Q G D + VG
Sbjct: 268 TETTIREIAQTGVDYVSVG 286
>gi|240103903|ref|YP_002960212.1| orotidine 5'-phosphate decarboxylase [Thermococcus gammatolerans
EJ3]
gi|239911457|gb|ACS34348.1| Orotidine 5'-phosphate decarboxylase (pyrF) [Thermococcus
gammatolerans EJ3]
Length = 211
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ +++AGAD ++VG S + A+R+ + K+
Sbjct: 173 VGEVLKAGADYIIVGRSIYASDNPRESARRIYEEVKA 209
>gi|148238413|ref|YP_001223800.1| hypothetical protein SynWH7803_0077 [Synechococcus sp. WH 7803]
gi|147846952|emb|CAK22503.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
Length = 258
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 22/46 (47%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
G+++ + + AGA + VGS+ ++ + L+++ A
Sbjct: 206 GLSAVTLPMAIAAGATGVGVGSAVNRLSDPLAMVAVVRSLREALTA 251
>gi|77164383|ref|YP_342908.1| nicotinate-nucleotide pyrophosphorylase [Nitrosococcus oceani ATCC
19707]
gi|254434640|ref|ZP_05048148.1| nicotinate-nucleotide pyrophosphorylase [Nitrosococcus oceani
AFC27]
gi|76882697|gb|ABA57378.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Nitrosococcus oceani ATCC 19707]
gi|207090973|gb|EDZ68244.1| nicotinate-nucleotide pyrophosphorylase [Nitrosococcus oceani
AFC27]
Length = 278
Score = 35.9 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 161 AKA--LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ I ++ LE GG+T +NI+ + + G D + VG
Sbjct: 220 LREAVRISQQRAKLEASGGITLKNIRQVAETGVDYISVG 258
>gi|327439884|dbj|BAK16249.1| pyridoxine biosynthesis enzyme [Solibacillus silvestris StLB046]
Length = 294
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +A+ +
Sbjct: 213 GGVATPADAALMMELGADGVFVGSGIFKSENPEKFARAI 251
>gi|303243931|ref|ZP_07330270.1| Orotidine 5'-phosphate decarboxylase [Methanothermococcus
okinawensis IH1]
gi|302485583|gb|EFL48508.1| Orotidine 5'-phosphate decarboxylase [Methanothermococcus
okinawensis IH1]
Length = 235
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 16/171 (9%)
Query: 49 FGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRT-IH 107
+G ++I +R D L +A S + ++ IH
Sbjct: 52 YGIEIIEHIRELYDGYIVADLKTIDTGRVEVRMAFECTANAVV--LSGVAPKATILKGIH 109
Query: 108 AMGKKTGVAI----NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
K ++ N E P+ + + + D ++ V+ G + + +
Sbjct: 110 ECEKCGIMSYLDTINIENPLKLYNSLELKPD---VLMVHRGIDEETFNKDRL----YLDT 162
Query: 164 LIGK-RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
K + + L V GGV+ NI L D+LVVG + A+ +
Sbjct: 163 DNEKDKKLILGVAGGVSIDNIDELKNK-YDILVVGRGITKSRDPGRVARAI 212
>gi|169632210|ref|YP_001705946.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter
baumannii SDF]
gi|226700273|sp|B0VPB7|HIS4_ACIBS RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|169151002|emb|CAO99635.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase
[Acinetobacter baumannii]
Length = 243
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F G + + + I +A + + +++ GG+ + I+ ++AG +
Sbjct: 47 LHLVDLNGAFAGTPIHKPVVEAIAKA-----QPELPIQIGGGIRSLETIEHYLEAGVTFV 101
Query: 195 VVGS 198
++G+
Sbjct: 102 IIGT 105
>gi|157691300|ref|YP_001485762.1| pyridoxal biosynthesis lyase PdxS [Bacillus pumilus SAFR-032]
gi|166980413|sp|A8FAD5|PDXS_BACP2 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|157680058|gb|ABV61202.1| pyridoxal biosynthesis lyase PdxS [Bacillus pumilus SAFR-032]
Length = 294
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|56420046|ref|YP_147364.1| thiamine-phosphate pyrophosphorylase [Geobacillus kaustophilus
HTA426]
gi|81819737|sp|Q5KZU0|THIE_GEOKA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|56379888|dbj|BAD75796.1| thiamine-phosphate diphosphorylase [Geobacillus kaustophilus
HTA426]
Length = 221
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+R+ + +I + GG+T+ N K++V+AGAD + V S+
Sbjct: 158 LRRLREAGI--TIPIVAIGGITAANAKTVVEAGADGVSVISAI 198
>gi|18310581|ref|NP_562515.1| thiamine monophosphate synthase family protein [Clostridium
perfringens str. 13]
gi|18145262|dbj|BAB81305.1| thiamin phosphate pyrophosphorylase [Clostridium perfringens str.
13]
Length = 193
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I I++ K + + I+L GG+ N K ++ AGAD S F
Sbjct: 132 PKGINFIKEIKEKVNCKVIAL---GGINEHNFKEVLGAGADDFACMSLLFMSNNIKKSLD 188
Query: 212 RLNDL 216
L
Sbjct: 189 TFKAL 193
>gi|284047301|ref|YP_003397641.1| Quinolinate phosphoribosyl transferase [Conexibacter woesei DSM
14684]
gi|283951522|gb|ADB54266.1| Quinolinate phosphoribosyl transferase [Conexibacter woesei DSM
14684]
Length = 360
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG--ADLLVVGSSFFNQKGE 206
+ K+R A G+ + + GG + I+ AG D VGSS +
Sbjct: 273 NPRLVEKVRAALDAAGRTDVRIVASGGFDAERIRRFEAAGVPVDAYGVGSSLIRGSND 330
>gi|268325240|emb|CBH38828.1| putative diphthamide biosynthesis protein [uncultured archaeon]
Length = 366
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
V++ +E ++ + ++ M N + + KI++ R + L++
Sbjct: 13 VSLKYLFSFKYVEFILCTRNEVMSMGTNS-------YDFELDKIKELIKNRDARRVGLQL 65
Query: 175 DGGVTSRNIKSLVQA----GADLLVVGSSFFNQKGEISYAKRLNDL 216
G+ + I+ + GA++++ GSS F +R+ DL
Sbjct: 66 PEGLKTVAIEIASEITKDTGAEVIISGSSCFGACDVDEKLERIVDL 111
>gi|226953691|ref|ZP_03824155.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter sp.
ATCC 27244]
gi|226835563|gb|EEH67946.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Acinetobacter sp.
ATCC 27244]
Length = 243
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA + ++E + ++ +N F G + + + I +A + + +++ GG+
Sbjct: 30 DDPVATAQHWVNEGARRLHLVDLNGAFAGTPIHKPVVEAIARA-----QPELPIQIGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ + AG +++G+
Sbjct: 85 RSLETIEHYLDAGVTFVIIGT 105
>gi|221317057|ref|YP_002533423.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 72a]
gi|225576246|ref|YP_002725244.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 94a]
gi|221237443|gb|ACM10280.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 72a]
gi|225546184|gb|ACN92198.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 94a]
Length = 404
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 11/150 (7%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + A D I + H R + + I G+ D+I
Sbjct: 158 VEELVKAHVD-ILVIDSAHGHSTRIIELVKKIKTKYPNLGLIAGNIVTKEAALDLISVGA 216
Query: 135 MILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQ 188
L + + PG I I I +I + DGG+ ++ +
Sbjct: 217 DCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIA 276
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AGAD +++G+ F E + + + KK
Sbjct: 277 AGADSVMIGN-LFAGTKESPSEEIIYNGKK 305
>gi|225576171|ref|YP_002725191.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 118a]
gi|225546903|gb|ACN92897.1| inosine-5'-monophosphate dehydrogenase [Borrelia burgdorferi 118a]
Length = 404
Score = 35.9 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 11/150 (7%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSL---RTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + A D I + H R + + I G+ D+I
Sbjct: 158 VEELVKAHVD-ILVIDSAHGHSTRIIELVKKIKTKYPNLGLIAGNIVTKEAALDLISVGA 216
Query: 135 MILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQ 188
L + + PG I I I +I + DGG+ ++ +
Sbjct: 217 DCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIA 276
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
AGAD +++G+ F E + + + KK
Sbjct: 277 AGADSVMIGN-LFAGTKESPSEEIIYNGKK 305
>gi|256371936|ref|YP_003109760.1| thiazole biosynthesis family protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008520|gb|ACU54087.1| thiazole biosynthesis family protein [Acidimicrobium ferrooxidans
DSM 10331]
Length = 255
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 159 RQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
R +A++ + + VD G+ + ++ GAD ++V S+ + A+ +
Sbjct: 164 RNLEAIVADAGVPVVVDAGIGAPSDAALALELGADAVLVASAIMRAEDPAVMARAI---- 219
Query: 218 KSALAID 224
ALA++
Sbjct: 220 --ALAVE 224
>gi|149180169|ref|ZP_01858674.1| thiamine-phosphate pyrophosphorylase [Bacillus sp. SG-1]
gi|148852361|gb|EDL66506.1| thiamine-phosphate pyrophosphorylase [Bacillus sp. SG-1]
Length = 222
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 13/140 (9%)
Query: 78 INIIADAGCDIITFHPESSP--HIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
I + + D + E P +RR + +G E +A D + +
Sbjct: 81 IELAVELDADGVHIGQEDEPAEDVRRKIGNKKILGVSAHTLEEAEHAIAAGADYLGIGPI 140
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADL 193
+T Q + I++ + + I + GG+T+ N ++ AGAD
Sbjct: 141 YPTLTKEDAKAVQG-----LTFIQELR----ESGIVIPLVGIGGITAENAAPIIGAGADG 191
Query: 194 LVVGSSFFNQKGEISYAKRL 213
+ V ++ K + A+ L
Sbjct: 192 VSVITAISQGKSPEAAARML 211
>gi|126433146|ref|YP_001068837.1| thiamine-phosphate pyrophosphorylase [Mycobacterium sp. JLS]
gi|189030574|sp|A3PTW9|THIE_MYCSJ RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|126232946|gb|ABN96346.1| thiamine-phosphate diphosphorylase [Mycobacterium sp. JLS]
Length = 226
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ + ++ AGA +VV + + A+RL D
Sbjct: 181 IGGIDEARLPEVLDAGARRIVVVRAITAADDPKAAARRLKD 221
>gi|108797524|ref|YP_637721.1| thiamine-phosphate pyrophosphorylase [Mycobacterium sp. MCS]
gi|119866610|ref|YP_936562.1| thiamine-phosphate pyrophosphorylase [Mycobacterium sp. KMS]
gi|123179600|sp|Q1BEL9|THIE_MYCSS RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|189030575|sp|A1UAB4|THIE_MYCSK RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|108767943|gb|ABG06665.1| thiamine-phosphate diphosphorylase [Mycobacterium sp. MCS]
gi|119692699|gb|ABL89772.1| thiamine-phosphate diphosphorylase [Mycobacterium sp. KMS]
Length = 226
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ + ++ AGA +VV + + A+RL D
Sbjct: 181 IGGIDEARLPEVLDAGARRIVVVRAITAADDPKAAARRLKD 221
>gi|59713505|ref|YP_206280.1| thiamine-phosphate pyrophosphorylase [Vibrio fischeri ES114]
gi|59481753|gb|AAW87392.1| thiamine phosphate synthase [Vibrio fischeri ES114]
Length = 212
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 20/136 (14%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H S + R + G+++ ET + +++ + G
Sbjct: 82 VHLGQSDMPAQIARQLIGPDMILGLSVENETQLCNAQEL------------PVDYLGISA 129
Query: 151 IESTIPKIRQAKAL--------IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
I ST K K + + + L GG+ NI+ +V G D + + S+ +
Sbjct: 130 IFSTPTKTNIIKEWGIQGLAFAVKESQLPLVAIGGINDSNIREVVDTGVDGIALVSAICH 189
Query: 203 QKGEISYAKRLNDLKK 218
++ L L
Sbjct: 190 ASSPKQASQALLGLMN 205
>gi|81299760|ref|YP_399968.1| nicotinate-nucleotide pyrophosphorylase [Synechococcus elongatus
PCC 7942]
gi|81168641|gb|ABB56981.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Synechococcus elongatus PCC 7942]
Length = 282
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSI--SLEVDGGVTSRNIKSLVQAGADLL 194
++ G G L + +++ A +I R+ +EV G ++ NI+++ + G D +
Sbjct: 208 ISAGVGVIMLDNMNLAQVQAAVQVIRDRAPRTKIEVSGNISLENIRAIAETGVDYI 263
>gi|322615214|gb|EFY12136.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617805|gb|EFY14701.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322624602|gb|EFY21433.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626948|gb|EFY23744.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634134|gb|EFY30870.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635675|gb|EFY32385.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322640190|gb|EFY36854.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646387|gb|EFY42899.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649354|gb|EFY45790.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322656475|gb|EFY52764.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322665661|gb|EFY61845.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667185|gb|EFY63352.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671191|gb|EFY67319.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675169|gb|EFY71246.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680777|gb|EFY76812.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686952|gb|EFY82929.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323192716|gb|EFZ77943.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198852|gb|EFZ83951.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323205138|gb|EFZ90116.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323208181|gb|EFZ93125.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213535|gb|EFZ98326.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323215794|gb|EGA00537.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221293|gb|EGA05716.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323223841|gb|EGA08144.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231240|gb|EGA15355.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233674|gb|EGA17766.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237744|gb|EGA21804.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245727|gb|EGA29721.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246535|gb|EGA30514.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323253020|gb|EGA36853.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323254772|gb|EGA38575.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323259528|gb|EGA43163.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323268311|gb|EGA51786.1| dihydropyrimidine dehydrogenase subunit B [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
Length = 411
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|305673869|ref|YP_003865541.1| inhibitor of thiaminase TenA [Bacillus subtilis subsp. spizizenii
str. W23]
gi|305412113|gb|ADM37232.1| inhibitor of thiaminase TenA [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 205
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS----YAKRL 213
+ K I I++ GG+T ++ + +AGA+ + V S F+ + Y+++L
Sbjct: 140 LSDIKQRISVPVIAI---GGMTPDRLRDVKRAGAEGIAVMSGIFSSADPLEAARRYSRKL 196
Query: 214 NDLK 217
+++
Sbjct: 197 KEMR 200
>gi|300114818|ref|YP_003761393.1| nicotinate-nucleotide pyrophosphorylase [Nitrosococcus watsonii
C-113]
gi|299540755|gb|ADJ29072.1| nicotinate-nucleotide pyrophosphorylase [Nitrosococcus watsonii
C-113]
Length = 278
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ +R LE GG+T N++ + + G D + VG
Sbjct: 225 QLTQRRAKLEASGGITLENVRQVAETGVDYISVG 258
>gi|269964841|ref|ZP_06179078.1| thiamine-phosphate diphosphorylase [Vibrio alginolyticus 40B]
gi|269830501|gb|EEZ84723.1| thiamine-phosphate diphosphorylase [Vibrio alginolyticus 40B]
Length = 204
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 22/206 (10%)
Query: 15 DFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSI 74
D + L + + G + G V A ++ + +D + +
Sbjct: 15 DLATLKRVVRKAVEGGVTMVQVREKHG-DVRAFIERAQAVKDILKDTDVPLIINDRVD-- 71
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV-IDEI 133
D H S R + K G++I E +A + + ID I
Sbjct: 72 -------VALAVDADGVHLGQSDMPAEIARQLIGPNKILGLSIETEEQLAEADSLPIDYI 124
Query: 134 DMILIMTVNPGFGGQQLIESTIPK---IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG 190
+ I ++ K I K + S+ + GG+ NI +L G
Sbjct: 125 GLSAIFATP--------TKTNTKKHWGIDGLKMALNTTSLPIVAIGGINETNIPALSATG 176
Query: 191 ADLLVVGSSFFNQKGEISYAKRLNDL 216
L + S+ + + + ++ L L
Sbjct: 177 VHGLALVSAICHAEDPKASSEYLLGL 202
>gi|194446223|ref|YP_002041458.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194404886|gb|ACF65108.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
Length = 411
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|167585714|ref|ZP_02378102.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia ubonensis Bu]
Length = 294
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N PV I + + ++D L G L T+ +R+A + +++ L
Sbjct: 198 AAFALNAGVPVQIEVETLAQLDTALAH----GAQSVLLDNFTVDMMREAVRVAAGKAV-L 252
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 253 EVSGGVNFDTVRTFAETGVD 272
>gi|114321762|ref|YP_743445.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228156|gb|ABI57955.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Alkalilimnicola
ehrlichii MLHE-1]
Length = 252
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N G+ + I +I + ++V GG+ I+ +AG D L
Sbjct: 51 LHLVDLNGAVAGKPVNAEIIHRIAT-----RYPDLRIQVGGGIRDLDTIRGYREAGVDDL 105
Query: 195 VVGS 198
++G+
Sbjct: 106 IIGT 109
>gi|186684126|ref|YP_001867322.1| aminotransferase, class V [Nostoc punctiforme PCC 73102]
gi|186466578|gb|ACC82379.1| aminotransferase, class V [Nostoc punctiforme PCC 73102]
Length = 484
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 13/74 (17%)
Query: 153 STIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADLLVVGS-SFFNQ-KGEIS 208
T IR+ K + +R + EVD G+T NI S+++A S + +N +
Sbjct: 400 CTYEYIRKLKNISDERDYEIAQEVDRGITR-NIPSIIRA--------SFAVYNTLEDCDR 450
Query: 209 YAKRLNDLKKSALA 222
+ + + K+ A
Sbjct: 451 FIDAIAQIAKNGFA 464
>gi|323494268|ref|ZP_08099380.1| chitinase [Vibrio brasiliensis LMG 20546]
gi|323311431|gb|EGA64583.1| chitinase [Vibrio brasiliensis LMG 20546]
Length = 849
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSS 199
DG VT N + +AGAD+ VVG +
Sbjct: 590 DGSVTPDNRNPIARAGADVTVVGPA 614
>gi|306844475|ref|ZP_07477065.1| thiamine-phosphate pyrophosphorylase [Brucella sp. BO1]
gi|306275288|gb|EFM57038.1| thiamine-phosphate pyrophosphorylase [Brucella sp. BO1]
Length = 203
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 21/183 (11%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMIS 72
+AD+ + + G + + + D + IR+ R + DC L+++
Sbjct: 13 SADW------LERMVPLGIRLVQLRIKDKADAQLRA----EIRAARDICAAH-DCQLIVN 61
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + + GC+ I E L I G K GV+ + E + V +
Sbjct: 62 D---YWKLALEEGCNFIHLGQEDLDGAD--LDAIRTGGLKLGVSSHDEAELDRALSV--K 114
Query: 133 IDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
D I + + P + + E +P++ + KA IG +I L GG++ + AGA
Sbjct: 115 PDYIALGPIYPTILKKMKWHEQGLPRLGEWKARIG--NIPLVGIGGLSIERAPGVFAAGA 172
Query: 192 DLL 194
D++
Sbjct: 173 DIV 175
>gi|196229048|ref|ZP_03127914.1| orotidine 5'-phosphate decarboxylase [Chthoniobacter flavus
Ellin428]
gi|196227329|gb|EDY21833.1| orotidine 5'-phosphate decarboxylase [Chthoniobacter flavus
Ellin428]
Length = 243
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
++ +AGAD +VVG N + A+ +
Sbjct: 202 TVEQAFRAGADYIVVGRPIRNAPDPKAAAEGMQQ 235
>gi|168242273|ref|ZP_02667205.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|194448536|ref|YP_002046240.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|197261723|ref|ZP_03161797.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|200387718|ref|ZP_03214330.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|194406840|gb|ACF67059.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|197239978|gb|EDY22598.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|199604816|gb|EDZ03361.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205338639|gb|EDZ25403.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
Length = 411
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|60682038|ref|YP_212182.1| thiamine-phosphate pyrophosphorylase [Bacteroides fragilis NCTC
9343]
gi|81314898|sp|Q5LCA7|THIE_BACFN RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|60493472|emb|CAH08258.1| putative thiamine-phosphate pyrophosphorylase [Bacteroides fragilis
NCTC 9343]
Length = 204
Score = 35.9 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 163 ALIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
A + + I + V GG+ + +I ++++ G + + + + + KR+ ++
Sbjct: 149 AQMNEAGIRIPVVAIGGIVAEDIPAIMETGVNGIALSGAILQAPDPVEETKRILNI 204
>gi|327392742|dbj|BAK10164.1| nicotinate-nucleotide pyrophosphorylase [carboxylating] NadC
[Pantoea ananatis AJ13355]
Length = 298
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P+ PV + + + E+ L + + L T+ ++R+A + R++ LEV G V
Sbjct: 207 PDVPVEVEVESLKELQDALTASADI----VMLDNFTLDEMREAVKITEGRAL-LEVSGNV 261
Query: 179 TSRNIKSLVQAGADLLVVG 197
T I+ + Q G D + VG
Sbjct: 262 TETTIREIAQTGVDYVSVG 280
>gi|320334805|ref|YP_004171516.1| Thiamine-phosphate pyrophosphorylase [Deinococcus maricopensis DSM
21211]
gi|319756094|gb|ADV67851.1| Thiamine-phosphate pyrophosphorylase [Deinococcus maricopensis DSM
21211]
Length = 218
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 152 ESTIPKIRQAKALIGKRSISL--EVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+T+ +R A A + + GG+ +++AGA L V + +
Sbjct: 144 PATLDYVRWAAAHAPEDHTGVPWYAIGGIDHATAPDVIRAGATRLAVVRAILDAPDPAQA 203
Query: 210 AKRLNDL 216
A L L
Sbjct: 204 AGDLARL 210
>gi|291288433|ref|YP_003505249.1| thiazole biosynthesis family protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885593|gb|ADD69293.1| thiazole biosynthesis family protein [Denitrovibrio acetiphilus DSM
12809]
Length = 258
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQ 188
++EI + +M + G + I++T + +I + I + VD G+ + ++
Sbjct: 144 LEEIGTVTVMPLGAPIGSNKGIKTTDN----LRIIIEQAKIPVVVDAGIGAPSHAALAIE 199
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLN 214
GAD ++V ++ + + A+
Sbjct: 200 MGADSVLVNTAIATARNPVRMAEAFR 225
>gi|326489777|dbj|BAK01869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 177 GV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISY----AKRLNDLKKSALAI 223
G+ T + K + GAD +++GS+ Q GE + +R+ + KS A
Sbjct: 216 GISTPEHAKQIASWGADGVIIGSAIVRQLGEAASPEEGLRRIEEYAKSIKAA 267
>gi|262373687|ref|ZP_06066965.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Acinetobacter junii SH205]
gi|262311440|gb|EEY92526.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [Acinetobacter junii SH205]
Length = 243
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA + +DE + ++ +N F G + + + I +A + + +++ GG+
Sbjct: 30 DDPVATAQHWVDEGARRLHLVDLNGAFAGTPIHKPVVEAIARA-----QPELPIQIGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ + AG +++G+
Sbjct: 85 RSLETIEHYLDAGVSFVIIGT 105
>gi|261419751|ref|YP_003253433.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. Y412MC61]
gi|297530289|ref|YP_003671564.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. C56-T3]
gi|319766566|ref|YP_004132067.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. Y412MC52]
gi|261376208|gb|ACX78951.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. Y412MC61]
gi|297253541|gb|ADI26987.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. C56-T3]
gi|317111432|gb|ADU93924.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. Y412MC52]
Length = 221
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+R+ + +I + GG+T+ N K++V+AGAD + V S+
Sbjct: 158 LRRLREAGI--TIPIVAIGGITAANAKTVVEAGADGVSVISAI 198
>gi|167042496|gb|ABZ07221.1| putative PcrB family protein [uncultured marine crenarchaeote
HF4000_ANIW133C7]
Length = 290
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGE 206
Q + + +R L V GG+ +++ SL++AGAD LV+G+ G
Sbjct: 225 QNVTPEMVQTVRNVFDGF------LMVGGGIRSAKTANSLIKAGADGLVIGTLLEQTGGL 278
Query: 207 ISYAKRLNDLKK 218
+ + + ++K
Sbjct: 279 KKFTEMVKSIQK 290
>gi|184158993|ref|YP_001847332.1| thiamine monophosphate synthase [Acinetobacter baumannii ACICU]
gi|332874773|ref|ZP_08442643.1| thiamine-phosphate diphosphorylase [Acinetobacter baumannii
6014059]
gi|183210587|gb|ACC57985.1| Thiamine monophosphate synthase [Acinetobacter baumannii ACICU]
gi|322508975|gb|ADX04429.1| ThiE [Acinetobacter baumannii 1656-2]
gi|323518960|gb|ADX93341.1| thiamine monophosphate synthase [Acinetobacter baumannii
TCDC-AB0715]
gi|332737034|gb|EGJ67991.1| thiamine-phosphate diphosphorylase [Acinetobacter baumannii
6014059]
Length = 203
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGAD 175
>gi|254251630|ref|ZP_04944948.1| Nicotinate-nucleotide pyrophosphorylase [Burkholderia dolosa
AUO158]
gi|124894239|gb|EAY68119.1| Nicotinate-nucleotide pyrophosphorylase [Burkholderia dolosa
AUO158]
Length = 395
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+N PV I + + ++D L G L + +R+A + +++ L
Sbjct: 299 AAFALNAGVPVQIEVETLAQLDTALAH----GAQSVLLDNFPLDMMREAVRVTAGKAL-L 353
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 354 EVSGGVNFDTVRAFAETGVD 373
>gi|88809115|ref|ZP_01124624.1| thiamine-phosphate pyrophosphorylase [Synechococcus sp. WH 7805]
gi|88787057|gb|EAR18215.1| thiamine-phosphate pyrophosphorylase [Synechococcus sp. WH 7805]
Length = 353
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 175 DGGVTSRNIKSLVQAGA-DLLVVGSSFFNQKGEISYAKRLNDL 216
GG+T+ + + +AGA + VV S+ +++L DL
Sbjct: 310 IGGITATTLPQVREAGASRVAVV-SAIMASDDPALASRQLLDL 351
>gi|326391058|ref|ZP_08212606.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Thermoanaerobacter ethanolicus JW 200]
gi|325992926|gb|EGD51370.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Thermoanaerobacter ethanolicus JW 200]
Length = 235
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 163 ALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+I +EV GG+ I L AG +++GS+ K + Y
Sbjct: 68 QIIKNCKAEIEVGGGIRNRETIDYLFSAGVKYVILGSAAIYDKDLLLY 115
>gi|325300452|ref|YP_004260369.1| nicotinate-nucleotide pyrophosphorylase [Bacteroides salanitronis
DSM 18170]
gi|324320005|gb|ADY37896.1| nicotinate-nucleotide pyrophosphorylase [Bacteroides salanitronis
DSM 18170]
Length = 284
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + + I +++ K G + E V L+++ +D+ G L
Sbjct: 171 HVDFAGGIDKAILRAKEYCKVKGKDLKIEIEVRNLDELQQVLDL-------GGVDRIMLD 223
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
T R+A ++G R +E GG+T ++ + G D + VG
Sbjct: 224 NFTPADTRKAVEMVGGR-YEIESSGGITFDTLRDYAECGVDFISVG 268
>gi|282897560|ref|ZP_06305560.1| Nicotinate-nucleotide pyrophosphorylase [Raphidiopsis brookii D9]
gi|281197483|gb|EFA72379.1| Nicotinate-nucleotide pyrophosphorylase [Raphidiopsis brookii D9]
Length = 297
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETP-VAILEDVID-EIDMILI--MTVNPGFGG 147
H ++ I ++++ + + + I ET + +E+ + + D+I++ M+++
Sbjct: 180 HIVAAGSITKAIQQVRSQIPYP-LTIEVETETIEQVEEALQCQADIIMLDNMSLD----- 233
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSS 199
++ + IRQ + + +E G ++ I+S+ Q G D + S+
Sbjct: 234 --MMTQAVSLIRQ-----QDKRVKVEASGNISLETIRSVAQTGVD-FISSSA 277
>gi|167549987|ref|ZP_02343745.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205325123|gb|EDZ12962.1| 3-hexulose-6-phosphate synthase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 149
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGK-RSISLEVDGGVTSRNIKSLVQAGADLLV 195
I++V+ G Q + I + ++ R + V GG+ S+++ V D+++
Sbjct: 67 HILSVHTGADQQT---AGREPIEDLRVMVEHTREAGISVAGGINSKSVAKYVALNPDIII 123
Query: 196 VGSSFFNQKGE 206
VGS +
Sbjct: 124 VGSGITHNPDP 134
>gi|163840333|ref|YP_001624738.1| dihydroorotate dehydrogenase 2 [Renibacterium salmoninarum ATCC
33209]
gi|162953809|gb|ABY23324.1| dihydroorotate dehydrogenase [Renibacterium salmoninarum ATCC
33209]
Length = 371
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 138 IMTVNPGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ---AGADL 193
+M+ G G L E ++ +++ ++++G + + V GGV + + AGA
Sbjct: 288 VMSYGVGGLSGAPLKERSLEVLQRLRSVVGDKLTLISV-GGV--ETAADVRERLDAGA-T 343
Query: 194 LVVGSSFFNQKGEISYAKRLNDLKK 218
LV G + F +G A+ DL K
Sbjct: 344 LVQGYTAFLYEGPFWAARINKDLAK 368
>gi|15606512|ref|NP_213892.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Aquifex aeolicus VF5]
gi|3913864|sp|O67328|HIS4_AQUAE RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|2983722|gb|AAC07284.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Aquifex aeolicus VF5]
Length = 238
Score = 35.9 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ IR+ + +EV GG+ + K+L G D +V+G+ + K + +
Sbjct: 64 PKNLEVIRKIRENFE---GEVEVGGGIRSYEVAKALFDEGIDFVVIGTLAY--KNKEEFL 118
Query: 211 KRLNDL-KKSALAID 224
K L + + LAID
Sbjct: 119 KILENFPNRVILAID 133
>gi|330995031|ref|ZP_08318948.1| thiamine-phosphate diphosphorylase [Paraprevotella xylaniphila YIT
11841]
gi|329576607|gb|EGG58110.1| thiamine-phosphate diphosphorylase [Paraprevotella xylaniphila YIT
11841]
Length = 210
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 70/211 (33%), Gaps = 37/211 (17%)
Query: 14 ADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISS 73
AD +RL + G + I + D + GA+V R Y +
Sbjct: 17 ADAARLA------LEGGCRWIQLRMKDASPEEWMRTGAEVEALCRRYGATFIL------- 63
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
D H+ + D I H S R + + G N T ++
Sbjct: 64 -DDHVEWVDVLHADGI--HLGKSDMPIDEARRLLGQDRIIGGTAN--TLEDVMLHAARGA 118
Query: 134 DMILIMTVNPGFGGQQLIESTIPKI---------RQAKALIGKRSISL--EVDGGVTSRN 182
D I G G + +T K+ R+ + K+SISL GG+T +
Sbjct: 119 DYI-------GCGPFRFT-TTKEKLAPTLGLEGYRRILDGMKKKSISLPLIAIGGITKED 170
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I +L++ G D + + + + +
Sbjct: 171 IPALMETGVDGIALSGTILRAGNPTEETQNI 201
>gi|323698055|ref|ZP_08109967.1| thiamine-phosphate pyrophosphorylase [Desulfovibrio sp. ND132]
gi|323457987|gb|EGB13852.1| thiamine-phosphate pyrophosphorylase [Desulfovibrio desulfuricans
ND132]
Length = 212
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 22/138 (15%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNP-----GF 145
H S + +R I G+++ +T +L+ +D + I P
Sbjct: 84 VHVGQSDMLPEDVRRIIGPDAILGLSV--DTEAELLDAQNRPVDYLGIGPAYPTLTKKDV 141
Query: 146 GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG----SSFF 201
G + +G+ +I L GGV N++++ +G V G S+
Sbjct: 142 KGTPWGPEG------LRRAVGQSAIPLVAIGGVQRDNVRAVAGSG----VAGIAVVSAIC 191
Query: 202 NQKGEISYAKRLN-DLKK 218
+ A+ L +K+
Sbjct: 192 SAPSPAEAARELAYAMKE 209
>gi|315644413|ref|ZP_07897546.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus vortex V453]
gi|315280163|gb|EFU43456.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus vortex V453]
Length = 485
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 78 INIIADAGCDIITFHPESSPHIR--RSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ AG D+IT HI S+R + + + D+I+
Sbjct: 235 AEALVKAGVDVITVDSAHGHHINIIDSVRKLREIYPDLTIIAGNVATGEATRDLIEAGAS 294
Query: 136 ILIMTVNPG--FGGQQLIESTIPKIRQAKALI---GKRSISLEVDGGVTSR-NIKSLVQA 189
++ + + PG + + +P+I + + + DGG+ I + A
Sbjct: 295 VVKVGIGPGSICTTRVIAGIGVPQITAIYDCATVAKEYGVPIIADGGIKYSGEITKAIAA 354
Query: 190 GADLLVVGS 198
GA +++GS
Sbjct: 355 GASAVMLGS 363
>gi|301163502|emb|CBW23053.1| putative thiamine-phosphate pyrophosphorylase [Bacteroides fragilis
638R]
Length = 204
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 163 ALIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
A + + I + V GG+ + +I ++++ G + + + + + KR+ ++
Sbjct: 149 AQMNEAGIRIPVVAIGGIVAEDIPAIMETGVNGIALSGAILQAPDPVEETKRILNI 204
>gi|261403012|ref|YP_003247236.1| tryptophan synthase, alpha subunit [Methanocaldococcus vulcanius
M7]
gi|261370005|gb|ACX72754.1| tryptophan synthase, alpha subunit [Methanocaldococcus vulcanius
M7]
Length = 280
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 7/129 (5%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
++ + + G I L G + P TP L+ ++++
Sbjct: 110 ENFVKKCKNVGISGIIVPDLPIEEAESLLSYCEKYGVDLIFLVAPTTPDERLKKILEKCR 169
Query: 135 MILIMTVNPGFGG--QQLIESTIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGA 191
+ + G G ++L E T IR+ K + + V G G++ + + A
Sbjct: 170 GFVYVVSRTGITGEREKLSEETEDLIRRVKK---YSKVPVCV-GFGISKKEHVEEITKFA 225
Query: 192 DLLVVGSSF 200
D +VGS+
Sbjct: 226 DGAIVGSAI 234
>gi|229542250|ref|ZP_04431310.1| pyridoxine biosynthesis protein [Bacillus coagulans 36D1]
gi|229326670|gb|EEN92345.1| pyridoxine biosynthesis protein [Bacillus coagulans 36D1]
Length = 293
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +AK +
Sbjct: 212 GGVATPADAALMMQLGADGVFVGSGIFKSENPAKFAKAI 250
>gi|126642501|ref|YP_001085485.1| putative thiamin-phosphate pyrophosphorylase [Acinetobacter
baumannii ATCC 17978]
gi|260556637|ref|ZP_05828855.1| thiamine-phosphate pyrophosphorylase [Acinetobacter baumannii ATCC
19606]
gi|126388385|gb|ABO12883.1| putative thiamin-phosphate pyrophosphorylase [Acinetobacter
baumannii ATCC 17978]
gi|260409896|gb|EEX03196.1| thiamine-phosphate pyrophosphorylase [Acinetobacter baumannii ATCC
19606]
Length = 203
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGAD 175
>gi|153207142|ref|ZP_01945921.1| nicotinate-nucleotide pyrophosphorylase [Coxiella burnetii 'MSU
Goat Q177']
gi|165918398|ref|ZP_02218484.1| nicotinate-nucleotide pyrophosphorylase [Coxiella burnetii RSA 334]
gi|212219422|ref|YP_002306209.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Coxiella
burnetii CbuK_Q154]
gi|120576803|gb|EAX33427.1| nicotinate-nucleotide pyrophosphorylase [Coxiella burnetii 'MSU
Goat Q177']
gi|165917904|gb|EDR36508.1| nicotinate-nucleotide pyrophosphorylase [Coxiella burnetii RSA 334]
gi|212013684|gb|ACJ21064.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Coxiella
burnetii CbuK_Q154]
Length = 274
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H S + ++++ A + + I E + E + + D+IL+
Sbjct: 166 HILSCGSLTQAIQKARASHPEKTLEIEVENLNELQEALAAKADIILL---------DNFD 216
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
TI K + I LE+ G V I + + G D + VG
Sbjct: 217 IDTIKKAVK----INNSQAKLEISGNVNLETIHEIAKTGVDYISVG 258
>gi|310780553|ref|YP_003968885.1| inosine-5'-monophosphate dehydrogenase [Ilyobacter polytropus DSM
2926]
gi|309749876|gb|ADO84537.1| inosine-5'-monophosphate dehydrogenase [Ilyobacter polytropus DSM
2926]
Length = 487
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 14/131 (10%)
Query: 78 INIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + +G DIIT H S + ++++ I + +D+ D
Sbjct: 235 VAALVKSGVDIITVDSAHG-HSNGVIQTVKKIREAFPDLDIIGGNIVTAEAAKDLADAGA 293
Query: 135 MILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSL 186
+ + V PG G + I + +R I + DGG+ ++
Sbjct: 294 TAVKVGVGPGSICTTRVVAGVGV--PQISAVNDVYEACKERGIGVIADGGIKLSGDVVKA 351
Query: 187 VQAGADLLVVG 197
+ AGAD +++G
Sbjct: 352 IAAGADCVMIG 362
>gi|228995743|ref|ZP_04155404.1| Thiamine-phosphate pyrophosphorylase [Bacillus mycoides Rock3-17]
gi|228763987|gb|EEM12873.1| Thiamine-phosphate pyrophosphorylase [Bacillus mycoides Rock3-17]
Length = 224
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLL 194
+I + GG+T N S+++AGAD +
Sbjct: 170 TIPIVGIGGITVENAASVIEAGADGV 195
>gi|242772584|ref|XP_002478064.1| O-methyltransferase, putative [Talaromyces stipitatus ATCC 10500]
gi|218721683|gb|EED21101.1| O-methyltransferase, putative [Talaromyces stipitatus ATCC 10500]
Length = 433
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 18 RLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCH-LMISSIDS 76
RL ++++ I G+ H V DG F V S R + H + S +
Sbjct: 338 RLLQQLAQILH-GSPWTHIIVTDGVSPLPGEFPPHVEISYRRRDITTMTMHNVKQRSQEE 396
Query: 77 HINIIADAGCD-IITFHPESSPHIRRSLRTIH 107
+ + + IT H ESS H+ + L +
Sbjct: 397 WLKLFSRVDPALKITTHFESSSHVCKGLWELR 428
>gi|195953174|ref|YP_002121464.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Hydrogenobaculum sp. Y04AAS1]
gi|195932786|gb|ACG57486.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Hydrogenobaculum sp. Y04AAS1]
Length = 234
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 164 LIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGS-SFFNQKGEISYAKRLN 214
L K +E+ GG+ + K+L + GAD ++VG+ + K + + + L
Sbjct: 72 LKQKNDAKVEIGGGIRSLETAKALFEIGADYIIVGTLAV---KDKEEFIRLLE 121
>gi|253701886|ref|YP_003023075.1| metallophosphoesterase [Geobacter sp. M21]
gi|251776736|gb|ACT19317.1| metallophosphoesterase [Geobacter sp. M21]
Length = 262
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 159 RQAKALIGKRSISLEVD-------G-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
R+ ++ + + L + G G+T + L + G ++ G+ +++K + Y
Sbjct: 22 RELHRIVDRHMVDLVIANGENAAGGFGLTEETARDLFKCGVQMITSGNHIWDKKDALEYI 81
Query: 211 KRLNDLKKSA 220
KR + + A
Sbjct: 82 KREERIVRPA 91
>gi|168236356|ref|ZP_02661414.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|197290436|gb|EDY29791.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
Length = 411
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|171185636|ref|YP_001794555.1| tryptophan synthase subunit alpha [Thermoproteus neutrophilus
V24Sta]
gi|170934848|gb|ACB40109.1| tryptophan synthase, alpha subunit [Thermoproteus neutrophilus
V24Sta]
Length = 235
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 179 TSRNIKSLVQAGADLLVVGSSFFN--QKGEISYAKRLNDLKKS 219
+ R ++V+AGAD +VVG++F + L +++ +
Sbjct: 188 SPRKAAAVVEAGADAVVVGTAFLRRLRNSVEEAIAFLKEIRGA 230
>gi|150402316|ref|YP_001329610.1| thiamine-phosphate pyrophosphorylase [Methanococcus maripaludis C7]
gi|166228079|sp|A6VG83|THIE_METM7 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|150033346|gb|ABR65459.1| thiamine-phosphate pyrophosphorylase [Methanococcus maripaludis C7]
Length = 207
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDL 216
I K++ + + GG+ N++++++ G + VV S+ + + A+ +N+L
Sbjct: 143 IDGLKSISKLSKLPIVAIGGINHSNVQNVLECGVSGVAVV-SAIVGAENILKSAENMNEL 201
Query: 217 KK 218
K
Sbjct: 202 IK 203
>gi|38229902|emb|CAD56501.1| hypothetical protein [Thermoproteus tenax]
Length = 395
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ + ++R L+G+R + + V GG+ + L D VG+S
Sbjct: 249 MRRIVEEVRWTLELMGRRDVKIVVSGGLDEEAVAELADI-VDAFGVGTSI 297
>gi|298674645|ref|YP_003726395.1| dimethylmenaquinone methyltransferase [Methanohalobium evestigatum
Z-7303]
gi|298287633|gb|ADI73599.1| Dimethylmenaquinone methyltransferase [Methanohalobium evestigatum
Z-7303]
Length = 426
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K ++ ++ + V GG+ + +V GAD+++VG + AK +
Sbjct: 150 IYLLKDVVDAVNVPVAVAGGIDEQRSSEIVNTGADIVIVGGNITRSDNVSRAAKTIRS 207
>gi|224583312|ref|YP_002637110.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|224467839|gb|ACN45669.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
Length = 411
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 65/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ +I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITSIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|194736993|ref|YP_002115276.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194712495|gb|ACF91716.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
Length = 411
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|29653458|ref|NP_819150.1| carboxylating nicotinate-nucleotide pyrophosphorylase [Coxiella
burnetii RSA 493]
gi|29540720|gb|AAO89664.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Coxiella
burnetii RSA 493]
Length = 274
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H S + ++++ A + + I E + E + + D+IL+
Sbjct: 166 HILSCGSLTQAIQKARASHPEKTLEIEVENLNELQEALAAKADIILL---------DNFD 216
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
TI K + I LE+ G V I + + G D + VG
Sbjct: 217 IDTIKKAVK----INNSQAKLEISGNVNLETIHEIAKTGVDYISVG 258
>gi|194334240|ref|YP_002016100.1| inosine-5'-monophosphate dehydrogenase [Prosthecochloris aestuarii
DSM 271]
gi|194312058|gb|ACF46453.1| inosine-5'-monophosphate dehydrogenase [Prosthecochloris aestuarii
DSM 271]
Length = 496
Score = 35.9 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 55/143 (38%), Gaps = 21/143 (14%)
Query: 78 INIIADAGCDIITF-----HPESSPHIRRSLRTIH-AMGKKTGVAINPETPVAILEDVID 131
+ + DAG D+I H ++ + ++++ + + G N TP + D+I
Sbjct: 240 VQALVDAGVDVIAVDTAHGHSKAVGDMVKTIKQHYPDLQIVAG---NVATP-EAVRDLIA 295
Query: 132 EIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NI 183
+ + + PG G + + I K + DGG+ ++
Sbjct: 296 AGADAVKVGIGPGSICTTRIVAGVGM--PQLTAIMNCSEEAAKTGTPIIADGGIKYSGDL 353
Query: 184 KSLVQAGADLLVVGSSFFNQKGE 206
+ AGAD +++GS F E
Sbjct: 354 AKAIAAGADSVMIGS-IFAGTDE 375
>gi|332796470|ref|YP_004457970.1| geranylgeranylglyceryl phosphate synthase [Acidianus hospitalis W1]
gi|332694205|gb|AEE93672.1| geranylgeranylglyceryl phosphate synthase [Acidianus hospitalis W1]
Length = 248
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 169 SISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
++++ V GG+ + LV+AGA ++V G+ + K + ++
Sbjct: 196 NLTIIVGGGIRSQEAAIKLVEAGAHIIVTGNII--EDNPEKAIKIIESIRN 244
>gi|284164143|ref|YP_003402422.1| tryptophan synthase subunit alpha [Haloterrigena turkmenica DSM
5511]
gi|284013798|gb|ADB59749.1| tryptophan synthase, alpha subunit [Haloterrigena turkmenica DSM
5511]
Length = 290
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 16/159 (10%)
Query: 73 SIDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
+ + A+AG I P R H + VA P T LE ++
Sbjct: 119 DVRPFVERAAEAGLSGIIVPDLPAEEADPLREACDDHGLDLVFIVA--PTTEGERLETIM 176
Query: 131 DEIDMILIMTVNPGFGGQQ--LIESTIPKIRQAKALIGKRSISLEVDGGVTS-RNIKSLV 187
++ + G G + + +T + + +++ GV+ + ++
Sbjct: 177 SQVSGFAYVQARLGTTGARADVSTATHESLARLAEYDVPKAVGF----GVSEGDHAAEII 232
Query: 188 QAGADLLVVGSSFF----NQKGEISYAK-RLNDLKKSAL 221
+A AD ++VGS+ + + + + +LK+ A+
Sbjct: 233 EADADGVIVGSALIDIVASSDDPAADLEAKAEELKRGAI 271
>gi|223039566|ref|ZP_03609853.1| thiamine-phosphate pyrophosphorylase [Campylobacter rectus RM3267]
gi|222879137|gb|EEF14231.1| thiamine-phosphate pyrophosphorylase [Campylobacter rectus RM3267]
Length = 200
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I +AK ++ I + V GG+ NI + D + V S+ + S + L
Sbjct: 141 FETIMRAKEILR---IPICVIGGINVANIAQIAALNPDYIAVISALYQ---PASIKENLR 194
Query: 215 DL 216
+L
Sbjct: 195 NL 196
>gi|218462751|ref|ZP_03502842.1| thiamine-phosphate pyrophosphorylase [Rhizobium etli Kim 5]
Length = 204
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 15/174 (8%)
Query: 20 GEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHIN 79
E I + G K + + D V+R S + I+ +
Sbjct: 13 AEWIERLVPLGVKLVQLRIKDR--------SEPVLRQEIRRSKAACAAAACQLIINDYWK 64
Query: 80 IIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM 139
+ D GCD I H + L I G K G++ + + + D + +
Sbjct: 65 LAIDEGCDFI--HLGQEDLMAADLAAIRRAGLKLGLSTHDPSELETALAAAP--DYVALG 120
Query: 140 TVNPGF-GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
V P + + ++ + +G + L GG+T+ +++ GAD
Sbjct: 121 PVWPTILKEMRWAPQGVERLADWRRRVG--PMPLVAIGGITAERAALVLENGAD 172
>gi|218676843|ref|YP_002395662.1| thiamine-phosphate pyrophosphorylase [Vibrio splendidus LGP32]
gi|218325111|emb|CAV26964.1| putative thiamine monophosphate syntase [Vibrio splendidus LGP32]
Length = 228
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 9/65 (13%)
Query: 161 AKALIGKRSIS---------LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
K G I + GG+ NI LV++G L + S+ + + +
Sbjct: 161 LKKHWGYDGIKMALETTKLPIVGIGGINESNIPQLVESGIHGLALVSAICHAEDPKQATQ 220
Query: 212 RLNDL 216
L L
Sbjct: 221 DLLSL 225
>gi|16765517|ref|NP_461132.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62180774|ref|YP_217191.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161613121|ref|YP_001587086.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167991114|ref|ZP_02572213.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168229542|ref|ZP_02654600.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|168259472|ref|ZP_02681445.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|168466133|ref|ZP_02700003.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|168818103|ref|ZP_02830103.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194470352|ref|ZP_03076336.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|197248087|ref|YP_002147158.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|198241985|ref|YP_002216271.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205353322|ref|YP_002227123.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207857621|ref|YP_002244272.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|238912629|ref|ZP_04656466.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|16420724|gb|AAL21091.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62128407|gb|AAX66110.1| putative dihydropyrimidine dehydrogenase [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161362485|gb|ABX66253.1| hypothetical protein SPAB_00829 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194456716|gb|EDX45555.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|195631189|gb|EDX49749.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|197211790|gb|ACH49187.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197936501|gb|ACH73834.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|205273103|emb|CAR38058.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205330434|gb|EDZ17198.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205335946|gb|EDZ22710.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|205345012|gb|EDZ31776.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205351177|gb|EDZ37808.1| dihydroorotate dehydrogenase family protein [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|206709424|emb|CAR33765.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261247401|emb|CBG25226.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994252|gb|ACY89137.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158748|emb|CBW18260.1| putative oxidoreductase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913177|dbj|BAJ37151.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320086627|emb|CBY96398.1| Dihydropyrimidine dehydrogenase [NADP+] DHPDHase; DPD;
Dihydrouracil dehydrogenase; Dihydrothymine
dehydrogenase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321224841|gb|EFX49904.1| Dihydropyrimidine [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322715249|gb|EFZ06820.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323130514|gb|ADX17944.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|326624022|gb|EGE30367.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326628411|gb|EGE34754.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332989121|gb|AEF08104.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 411
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|190575719|ref|YP_001973564.1| thiamine-phosphate pyrophosphorylase [Stenotrophomonas maltophilia
K279a]
gi|190013641|emb|CAQ47276.1| putative thiamine-phosphate pyrophosphorylase [Stenotrophomonas
maltophilia K279a]
Length = 208
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 175 DGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKR 212
GG+T N+ ++ AGAD + VV S + ++ +
Sbjct: 165 IGGLTPDNVGPIIDAGADLVAVV-SGIYAASDPVATQRA 202
>gi|297584976|ref|YP_003700756.1| thiamine monophosphate synthase [Bacillus selenitireducens MLS10]
gi|297143433|gb|ADI00191.1| thiamine monophosphate synthase [Bacillus selenitireducens MLS10]
Length = 185
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 175 DGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLN 214
GGV IK+L +AGA + V+G + F + A L
Sbjct: 141 IGGVEPHRIKALKEAGASGVAVIG-AVFLSEDPARAACELR 180
>gi|153955534|ref|YP_001396299.1| thiamine-phosphate pyrophosphorylase [Clostridium kluyveri DSM 555]
gi|219855930|ref|YP_002473052.1| hypothetical protein CKR_2587 [Clostridium kluyveri NBRC 12016]
gi|146348392|gb|EDK34928.1| ThiE2 [Clostridium kluyveri DSM 555]
gi|219569654|dbj|BAH07638.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 203
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 8/127 (6%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNP-GFGGQQ 149
H S + R I K G+++ LE + D + I T+ G
Sbjct: 83 VHLGQSDMPLVAARNILGKNKIIGISV--GNVEEALEAEKNGADYVGIGTIFFTGTKKDI 140
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEIS 208
I I ++ I ++++ GG+ N + ++ G D + VV S+ + +
Sbjct: 141 DIPIGIEGLKSVYNSINIPAVAI---GGINENNFREVLSTGIDGISVV-SAILGKNDIKA 196
Query: 209 YAKRLND 215
AK L+
Sbjct: 197 AAKALHK 203
>gi|78048387|ref|YP_364562.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036817|emb|CAJ24510.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 295
Score = 35.9 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + ++ A + + + ET + L + + ++ I+ + Q +
Sbjct: 177 HIRAAGSLSAAVHAARAQQPQLPLVVEVET-LEQLHEAL-QVGCTRILIDDFD---QAMR 231
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+R AL +R I LEV G V I+++ + G D +
Sbjct: 232 REA---VRLVAALPPERRIPLEVSGSVDLAGIRAIAEDGVDCI 271
>gi|239501120|ref|ZP_04660430.1| thiamine monophosphate synthase [Acinetobacter baumannii AB900]
Length = 203
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGAD 175
>gi|212224400|ref|YP_002307636.1| orotidine 5'-phosphate decarboxylase [Thermococcus onnurineus NA1]
gi|212009357|gb|ACJ16739.1| orotidine-5'-phosphate decarboxylase [Thermococcus onnurineus NA1]
Length = 215
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+++AGAD ++VG S + + A++L+D
Sbjct: 178 AWEVLKAGADYIIVGRSIYASENPRESARKLHD 210
>gi|169795155|ref|YP_001712948.1| putative thiamin-phosphate pyrophosphorylase (ThiE) [Acinetobacter
baumannii AYE]
gi|213158179|ref|YP_002320230.1| thiamine-phosphate pyrophosphorylase [Acinetobacter baumannii
AB0057]
gi|215482705|ref|YP_002324903.1| Probable thiamine-phosphate pyrophosphorylase [Acinetobacter
baumannii AB307-0294]
gi|301346921|ref|ZP_07227662.1| putative thiamin-phosphate pyrophosphorylase [Acinetobacter
baumannii AB056]
gi|301512177|ref|ZP_07237414.1| putative thiamin-phosphate pyrophosphorylase [Acinetobacter
baumannii AB058]
gi|301597005|ref|ZP_07242013.1| putative thiamin-phosphate pyrophosphorylase [Acinetobacter
baumannii AB059]
gi|332857038|ref|ZP_08436344.1| thiamine-phosphate diphosphorylase [Acinetobacter baumannii
6013150]
gi|332869975|ref|ZP_08438951.1| thiamine-phosphate diphosphorylase [Acinetobacter baumannii
6013113]
gi|169148082|emb|CAM85945.1| putative thiamin-phosphate pyrophosphorylase (ThiE) [Acinetobacter
baumannii AYE]
gi|213057339|gb|ACJ42241.1| thiamine-phosphate pyrophosphorylase [Acinetobacter baumannii
AB0057]
gi|213988411|gb|ACJ58710.1| Probable thiamine-phosphate pyrophosphorylase [Acinetobacter
baumannii AB307-0294]
gi|332726853|gb|EGJ58367.1| thiamine-phosphate diphosphorylase [Acinetobacter baumannii
6013150]
gi|332732475|gb|EGJ63726.1| thiamine-phosphate diphosphorylase [Acinetobacter baumannii
6013113]
Length = 203
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGAD 175
>gi|16802363|ref|NP_463848.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes EGD-e]
gi|224502389|ref|ZP_03670696.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
R2-561]
gi|255029431|ref|ZP_05301382.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes LO28]
gi|24212493|sp|Q8YA44|THIE_LISMO RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|16409682|emb|CAD00845.1| lmo0318 [Listeria monocytogenes EGD-e]
Length = 214
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+I + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 163 TIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLKN 209
>gi|325122996|gb|ADY82519.1| putative thiamin-phosphate pyrophosphorylase [Acinetobacter
calcoaceticus PHEA-2]
Length = 203
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N KS+++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKSVIEAGAD 175
>gi|324009490|gb|EGB78709.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 57-2]
Length = 256
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A K G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAEKLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|313617871|gb|EFR90065.1| pyridoxal biosynthesis lyase PdxS [Listeria innocua FSL S4-378]
Length = 158
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F +A +
Sbjct: 77 GGVATPADAALMMELGADGVFVGSGIFKSDNPAKFASAI 115
>gi|299769208|ref|YP_003731234.1| putative thiamin-phosphate pyrophosphorylase [Acinetobacter sp.
DR1]
gi|298699296|gb|ADI89861.1| putative thiamin-phosphate pyrophosphorylase [Acinetobacter sp.
DR1]
Length = 203
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGAD 175
>gi|228937317|ref|ZP_04099965.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970203|ref|ZP_04130864.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976773|ref|ZP_04137187.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis Bt407]
gi|228782935|gb|EEM31099.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis Bt407]
gi|228789504|gb|EEM37422.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822342|gb|EEM68322.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326937807|gb|AEA13703.1| pyridoxine biosynthesis protein [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 295
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGIATPADAALMMQLGADGVFVGSGIFKSENPERFARAI 252
>gi|290892532|ref|ZP_06555525.1| thiamine-phosphate synthase [Listeria monocytogenes FSL J2-071]
gi|290557841|gb|EFD91362.1| thiamine-phosphate synthase [Listeria monocytogenes FSL J2-071]
Length = 214
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+I + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 163 TIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLKN 209
>gi|169632852|ref|YP_001706588.1| putative thiamin-phosphate pyrophosphorylase (ThiE) [Acinetobacter
baumannii SDF]
gi|169151644|emb|CAP00429.1| putative thiamin-phosphate pyrophosphorylase (ThiE) [Acinetobacter
baumannii]
Length = 203
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGAD 175
>gi|158426034|ref|YP_001527326.1| 2-keto-3-deoxy-6-phosphogluconate aldolase [Azorhizobium
caulinodans ORS 571]
gi|158332923|dbj|BAF90408.1| 2-keto-3-deoxy-6-phosphogluconate aldolase [Azorhizobium
caulinodans ORS 571]
Length = 209
Score = 35.9 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 15/128 (11%)
Query: 99 IRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
L I A K G+ P TP D + + F + + +
Sbjct: 92 PHADLEVIRAA-KARGLVCTPGVATPTEAFAARAAGADALKL------FPAEGIPPHVVK 144
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN-QKGEISYAKRLND 215
R I + GG+ + N+++ +AGA +GS+ + KG + A
Sbjct: 145 AWRAVLTDIPLLPV-----GGIDASNMRAYREAGASGFGIGSALYKPGKGVAAIAVDGAS 199
Query: 216 LKKSALAI 223
L K+A ++
Sbjct: 200 LVKAARSV 207
>gi|312142745|ref|YP_003994191.1| nicotinate-nucleotide pyrophosphorylase [Halanaerobium sp.
'sapolanicus']
gi|311903396|gb|ADQ13837.1| nicotinate-nucleotide pyrophosphorylase [Halanaerobium sp.
'sapolanicus']
Length = 278
Score = 35.5 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H +++ I+ ++ I A T + + D + ++D L V+ L
Sbjct: 169 HLKAAGSIKNAVEKIKANISH-------TTKIELEIDELPQLDEALEAEVDI----ILLD 217
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ ++++A ++ R I LE GG+T N+ + +G D++ VG
Sbjct: 218 NMSPEELKKAVQIVDGRVI-LEASGGITKENVAEIAASGVDIISVG 262
>gi|308171902|ref|YP_003918607.1| pyridoxine biosynthesis protein [Bacillus amyloliquefaciens DSM 7]
gi|307604766|emb|CBI41137.1| pyridoxine biosynthesis protein [Bacillus amyloliquefaciens DSM 7]
gi|328551710|gb|AEB22202.1| pyridoxal biosynthesis lyase PdxS [Bacillus amyloliquefaciens
TA208]
gi|328909970|gb|AEB61566.1| pyridoxine biosynthesis protein [Bacillus amyloliquefaciens LL3]
Length = 294
Score = 35.5 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|291482381|dbj|BAI83456.1| pyridoxine biosynthesis protein [Bacillus subtilis subsp. natto
BEST195]
Length = 294
Score = 35.5 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|254172945|ref|ZP_04879619.1| orotidine 5'-phosphate decarboxylase [Thermococcus sp. AM4]
gi|214033101|gb|EEB73929.1| orotidine 5'-phosphate decarboxylase [Thermococcus sp. AM4]
Length = 211
Score = 35.5 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+++AGAD ++VG S + A+R+
Sbjct: 173 AGEVLKAGADYIIVGRSIYASDNPRESARRI 203
>gi|159044417|ref|YP_001533211.1| putative glutamate synthase large subunit-like protein
[Dinoroseobacter shibae DFL 12]
gi|157912177|gb|ABV93610.1| putative glutamate synthase large subunit-like protein
[Dinoroseobacter shibae DFL 12]
Length = 444
Score = 35.5 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQ-- 203
GQ L+ +R + L R + L V GG+ T ++ + GAD +G++
Sbjct: 273 GQPLLACIPEAVRALQDLGVHREVQLVVSGGIRTGADVAKALALGADATAIGTAALIALG 332
Query: 204 KGEISYAKRLNDLKKSALAID 224
+ Y L +A A D
Sbjct: 333 DNDPKYEAEYAALGTTAGAYD 353
>gi|52078502|ref|YP_077293.1| pyridoxal biosynthesis lyase PdxS [Bacillus licheniformis ATCC
14580]
gi|52783866|ref|YP_089695.1| pyridoxal biosynthesis lyase PdxS [Bacillus licheniformis ATCC
14580]
gi|319648530|ref|ZP_08002745.1| pyridoxal biosynthesis lyase pdxS [Bacillus sp. BT1B_CT2]
gi|68565716|sp|Q65PL2|PDXS_BACLD RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|52001713|gb|AAU21655.1| Vitamin B6 biosynthesis protein [Bacillus licheniformis ATCC 14580]
gi|52346368|gb|AAU39002.1| YaaD [Bacillus licheniformis ATCC 14580]
gi|317389378|gb|EFV70190.1| pyridoxal biosynthesis lyase pdxS [Bacillus sp. BT1B_CT2]
Length = 294
Score = 35.5 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|16265278|ref|NP_438070.1| thiamine-phosphate pyrophosphorylase [Sinorhizobium meliloti 1021]
gi|15141418|emb|CAC49930.1| putative thiamine-phosphate pyrophosphorylase protein
[Sinorhizobium meliloti 1021]
Length = 201
Score = 35.5 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 15/171 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
I + G K + + D + IR + +V H ++ + +
Sbjct: 16 IERLVPLGVKLVQLRIKDRN--------EEDIRHQIRVARTVCSAHACQLIVNDYWQLAI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+ CD I H L I A G K GV+ + E +A D + + +
Sbjct: 68 EEACDFI--HLGQEDLAEADLAAIRAAGLKLGVSTHDEAELAKALAAEP--DYVALGPIY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
P + + + ++ + + + L GG+ + I+ + GAD
Sbjct: 124 PTILKKMKWAPQGLERLSWWRERV--HPLPLVAIGGLNTERIEGVFAHGAD 172
>gi|118580778|ref|YP_902028.1| response regulator receiver modulated CheW protein [Pelobacter
propionicus DSM 2379]
gi|118503488|gb|ABK99970.1| response regulator receiver modulated CheW protein [Pelobacter
propionicus DSM 2379]
Length = 297
Score = 35.5 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 28/138 (20%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE----IDMILIMTVNPGFGG 147
H R ++ + ++ + G + T + +++ +D+I+ PG G
Sbjct: 178 HVLIVDDSRAAIMLLQSLLDRIGFSHIAMTSADKALEYLEKEHGRVDLIISDIEMPGMDG 237
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGV------TSRNIKSLVQAGADLLVVGSSFF 201
R + G + + + NI QAGA+ V
Sbjct: 238 FTFT-------RTLREKAGYEHLKV-----ILHSSMSNPSNILKAEQAGANKFVA----- 280
Query: 202 NQKGEISYAKRLNDLKKS 219
+ S ++ + L ++
Sbjct: 281 -KFDPESLSEEIISLIEA 297
>gi|296332948|ref|ZP_06875406.1| pyridoxal biosynthesis lyase PdxS [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305672709|ref|YP_003864380.1| pyridoxal biosynthesis lyase PdxS [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149912|gb|EFG90803.1| pyridoxal biosynthesis lyase PdxS [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305410952|gb|ADM36070.1| pyridoxal biosynthesis lyase PdxS [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 294
Score = 35.5 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|289706380|ref|ZP_06502738.1| thiamine-phosphate diphosphorylase [Micrococcus luteus SK58]
gi|289556875|gb|EFD50208.1| thiamine-phosphate diphosphorylase [Micrococcus luteus SK58]
Length = 245
Score = 35.5 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV + + + AGA+ +VV + + + A+ L
Sbjct: 201 IGGVDADRLPEVRAAGAERIVVVRAVTQAEDPEAAARTLRA 241
>gi|284800609|ref|YP_003412474.1| hypothetical protein LM5578_0356 [Listeria monocytogenes 08-5578]
gi|284993795|ref|YP_003415563.1| hypothetical protein LM5923_0355 [Listeria monocytogenes 08-5923]
gi|284056171|gb|ADB67112.1| hypothetical protein LM5578_0356 [Listeria monocytogenes 08-5578]
gi|284059262|gb|ADB70201.1| hypothetical protein LM5923_0355 [Listeria monocytogenes 08-5923]
Length = 214
Score = 35.5 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+I + GG+ N ++ AGAD + V S+ S K+L +
Sbjct: 163 TIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLKN 209
>gi|268679044|ref|YP_003303475.1| tryptophan synthase subunit alpha [Sulfurospirillum deleyianum DSM
6946]
gi|268617075|gb|ACZ11440.1| tryptophan synthase, alpha subunit [Sulfurospirillum deleyianum DSM
6946]
Length = 246
Score = 35.5 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 16/157 (10%)
Query: 74 IDSHINIIADAGCDIITF----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
+D I +G H E+ P+ + G + P + +
Sbjct: 93 MDFFIQQATQSGVKGFIIPDLPHEEALPYAS----LMQQQGLSLVSFVAPTDSKERIAHI 148
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQ 188
+ + + + G G E I Q KA G GV + K V+
Sbjct: 149 VKDAKGFIYLVAYAGITGAHASEDLSQTIAQIKAHSQTPLFV----GFGVNEKTAKERVR 204
Query: 189 AGADLLVVGSSF--FNQKGEISYAKRLNDLKKSALAI 223
GAD ++VGS+F +SY+ +++ + + A I
Sbjct: 205 -GADGVIVGSAFVEILLNDALSYSDKISSIAQKAKII 240
>gi|154684529|ref|YP_001419690.1| pyridoxal biosynthesis lyase PdxS [Bacillus amyloliquefaciens
FZB42]
gi|166980412|sp|A7Z0D3|PDXS_BACA2 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|154350380|gb|ABS72459.1| PdxS [Bacillus amyloliquefaciens FZB42]
Length = 294
Score = 35.5 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|271498804|ref|YP_003331829.1| thiazole biosynthesis family protein [Dickeya dadantii Ech586]
gi|270342359|gb|ACZ75124.1| thiazole biosynthesis family protein [Dickeya dadantii Ech586]
Length = 259
Score = 35.5 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 51/139 (36%), Gaps = 16/139 (11%)
Query: 91 FHPES---SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG- 146
HP+ P +L+ + K V + +L +++I +M + G
Sbjct: 98 IHPDMKYLLPDPVETLKAAEQLVKDGFVVLPYCGADPVLCKRLEDIGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I + + + VD G+ + ++ GAD ++V ++ +
Sbjct: 158 NQGLQTRDF-----LRIIIEQARVPVVVDAGIGAPSHAAEAIELGADAVLVNTAIAVARD 212
Query: 206 EISYAKRLNDLKKSALAID 224
+ A LA+D
Sbjct: 213 PVQMAHAFR------LAVD 225
>gi|307154979|ref|YP_003890363.1| glycine oxidase ThiO [Cyanothece sp. PCC 7822]
gi|306985207|gb|ADN17088.1| glycine oxidase ThiO [Cyanothece sp. PCC 7822]
Length = 653
Score = 35.5 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 114 GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSIS 171
G A+ P L ++E+ +M + G GQ + + I +I + I
Sbjct: 523 GFAVLPYINADPLLAKRLEEVGCATVMPLGSPIGSGQGIKNAANIAI-----IIEQSGIP 577
Query: 172 LEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ VD G+ T ++ GAD L++ S+ + AK + L A
Sbjct: 578 VVVDAGIGTPSEAALAMEMGADALLINSAIALSQNPPQMAKAM-GLAAQA 626
>gi|311744972|ref|ZP_07718757.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Algoriphagus
sp. PR1]
gi|126577479|gb|EAZ81699.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Algoriphagus
sp. PR1]
Length = 285
Score = 35.5 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 139 MTVNPGFGGQQLI---ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
++ GG I +R+A +IG + +E GG+T + + + G D +
Sbjct: 209 VSEVIRVGGVDFIMLDNMDYETMREAVKMIGGQ-FKIEASGGITEDTLIPVAECGVDFIS 267
Query: 196 VG 197
+G
Sbjct: 268 MG 269
>gi|119390634|pdb|2NV1|A Chain A, Structure Of The Synthase Subunit Pdx1 (Yaad) Of Plp
Synthase From Bacillus Subtilis
gi|119390635|pdb|2NV1|B Chain B, Structure Of The Synthase Subunit Pdx1 (Yaad) Of Plp
Synthase From Bacillus Subtilis
gi|119390636|pdb|2NV1|C Chain C, Structure Of The Synthase Subunit Pdx1 (Yaad) Of Plp
Synthase From Bacillus Subtilis
gi|119390637|pdb|2NV1|D Chain D, Structure Of The Synthase Subunit Pdx1 (Yaad) Of Plp
Synthase From Bacillus Subtilis
gi|119390638|pdb|2NV1|E Chain E, Structure Of The Synthase Subunit Pdx1 (Yaad) Of Plp
Synthase From Bacillus Subtilis
gi|119390639|pdb|2NV1|F Chain F, Structure Of The Synthase Subunit Pdx1 (Yaad) Of Plp
Synthase From Bacillus Subtilis
Length = 305
Score = 35.5 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 216 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 254
>gi|222530508|ref|YP_002574390.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
S-methyltransferase [Caldicellulosiruptor bescii DSM
6725]
gi|222457355|gb|ACM61617.1| 5-methyltetrahydropteroyltriglutamate/homocysteine
S-methyltransferase [Caldicellulosiruptor bescii DSM
6725]
Length = 757
Score = 35.5 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 12/115 (10%)
Query: 54 IRSLRSYSDSV-----FDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
I++ R V H+ S+ D ++ IA D+ITF E++ L +I+
Sbjct: 625 IKAFRLSCSKVKPETQIHTHMCYSNFDELLDEIAKMDVDVITF--EAAKSDFTLLDSINK 682
Query: 109 MGKKTGV---AINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQ 160
K V + +P + ++ + ++ IL M G + K R+
Sbjct: 683 SQLKAEVGPGVFDVHSPRIVSKEEMKKL--ILKMIEKVGKDRLWINPDCGLKTRK 735
>gi|16077079|ref|NP_387892.1| pyridoxal biosynthesis lyase PdxS [Bacillus subtilis subsp.
subtilis str. 168]
gi|221307820|ref|ZP_03589667.1| pyridoxine biosynthesis protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221312142|ref|ZP_03593947.1| pyridoxine biosynthesis protein [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221317075|ref|ZP_03598369.1| pyridoxine biosynthesis protein [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221321338|ref|ZP_03602632.1| pyridoxine biosynthesis protein [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321313678|ref|YP_004205965.1| pyridoxal biosynthesis lyase PdxS [Bacillus subtilis BSn5]
gi|586857|sp|P37527|PDXS_BACSU RecName: Full=Pyridoxal biosynthesis lyase pdxS; AltName:
Full=Superoxide-inducible protein 7; Short=SOI7
gi|119390640|pdb|2NV2|A Chain A, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390642|pdb|2NV2|C Chain C, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390644|pdb|2NV2|E Chain E, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390646|pdb|2NV2|G Chain G, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390648|pdb|2NV2|I Chain I, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390650|pdb|2NV2|K Chain K, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390652|pdb|2NV2|M Chain M, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390654|pdb|2NV2|O Chain O, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390656|pdb|2NV2|Q Chain Q, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390658|pdb|2NV2|S Chain S, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390660|pdb|2NV2|U Chain U, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|119390662|pdb|2NV2|W Chain W, Structure Of The Plp Synthase Complex Pdx12 (YAADE) FROM
Bacillus Subtilis
gi|467401|dbj|BAA05247.1| unknown [Bacillus subtilis]
gi|2632278|emb|CAB11787.1| glutamine amidotransferase for pyridoxal phosphate synthesis
[Bacillus subtilis subsp. subtilis str. 168]
gi|320019952|gb|ADV94938.1| pyridoxal biosynthesis lyase PdxS [Bacillus subtilis BSn5]
Length = 294
Score = 35.5 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|330987728|gb|EGH85831.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 282
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLSELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ LE GG+ ++ + + G D +
Sbjct: 213 GANIIMLDELSLDDMREAVRLTAGRA-RLEASGGINDDTLRVIAETGVDYI 262
>gi|302037783|ref|YP_003798105.1| thiamine-phosphate pyrophosphorylase [Candidatus Nitrospira
defluvii]
gi|300605847|emb|CBK42180.1| Thiamine-phosphate pyrophosphorylase [Candidatus Nitrospira
defluvii]
Length = 204
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ +R A+AL ++ GG+T+ ++ ++ AGAD + V S+ + +
Sbjct: 137 LEGLRAARALTSLPMFAI---GGITAESLGEIMAAGADGVAVISAILKAPDLGAAIRAFQ 193
Query: 215 D 215
Sbjct: 194 Q 194
>gi|229551325|ref|ZP_04440050.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Lactobacillus
rhamnosus LMS2-1]
gi|258540923|ref|YP_003175422.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Lactobacillus
rhamnosus Lc 705]
gi|229315284|gb|EEN81257.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Lactobacillus
rhamnosus LMS2-1]
gi|257152599|emb|CAR91571.1| Hexulose-6-phosphate synthase [Lactobacillus rhamnosus Lc 705]
Length = 213
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 8/66 (12%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL--LVVGSSFFNQK 204
G E + K++ + + V GG++ +K AG D+ + G +
Sbjct: 141 GGSWGEKDLAKVKMLVDM----GFRVSVTGGLSVDTLKLF--AGVDVYTFIAGRAITQAP 194
Query: 205 GEISYA 210
A
Sbjct: 195 DPAKAA 200
>gi|15643101|ref|NP_228144.1| dihydroorotate dehydrogenase [Thermotoga maritima MSB8]
gi|148269723|ref|YP_001244183.1| dihydroorotate dehydrogenase family protein [Thermotoga petrophila
RKU-1]
gi|9297058|sp|Q9WYG8|PYRD_THEMA RecName: Full=Dihydroorotate dehydrogenase; AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|166215966|sp|A5IK84|PYRD_THEP1 RecName: Full=Dihydroorotate dehydrogenase; AltName:
Full=DHOdehase; Short=DHOD; Short=DHODase; AltName:
Full=Dihydroorotate oxidase
gi|4980834|gb|AAD35420.1|AE001714_11 dihydroorotate dehydrogenase [Thermotoga maritima MSB8]
gi|147735267|gb|ABQ46607.1| dihydroorotate oxidase B, catalytic subunit [Thermotoga petrophila
RKU-1]
Length = 270
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVD--GGV-TSRNIKSLVQAGADLLVVGSSF 200
G G L + + + K + L V GGV + ++ + ++ GAD++ VGS+
Sbjct: 196 GLSGPVLKPIALRAVYEVKKRFPE----LFVIASGGVYSVKDAEEFLKVGADVIGVGSAL 251
Query: 201 FNQKGEISYA-KRLNDLKK 218
F G + K L ++K+
Sbjct: 252 FKDPGVVEEIGKYLLEVKR 270
>gi|328950432|ref|YP_004367767.1| GMP synthase (glutamine-hydrolyzing) [Marinithermus hydrothermalis
DSM 14884]
gi|328450756|gb|AEB11657.1| GMP synthase (glutamine-hydrolyzing) [Marinithermus hydrothermalis
DSM 14884]
Length = 504
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 152 ESTIPK-IRQAKALIGKRSISLEVDGGVTSRNIK-SLVQAGAD---LLV 195
E T+ +R+ + +G+ + L V GGV S + L +AG D + V
Sbjct: 194 EHTLESLVREVRERVGEERVLLAVSGGVDSSTLALLLARAGVDHVAVFV 242
>gi|296242561|ref|YP_003650048.1| geranylgeranylglyceryl diphosphate synthase [Thermosphaera
aggregans DSM 11486]
gi|296095145|gb|ADG91096.1| geranylgeranylglyceryl diphosphate synthase [Thermosphaera
aggregans DSM 11486]
Length = 246
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 142 NPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
G G QQ + + P I + + V GG+ + + +V++GAD++V G+
Sbjct: 174 EAGSGSQQTVPPSFPAIVK-----KYTGLVTIVGGGIRSPEQAREMVKSGADVIVTGTIV 228
Query: 201 FNQKGEISYAKRLNDLK 217
+K K + +K
Sbjct: 229 --EKDPELAVKIVKAVK 243
>gi|298492278|ref|YP_003722455.1| Indole-3-glycerol-phosphate synthase ['Nostoc azollae' 0708]
gi|298234196|gb|ADI65332.1| Indole-3-glycerol-phosphate synthase ['Nostoc azollae' 0708]
Length = 291
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 13/207 (6%)
Query: 11 ILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLM 70
I++ DF L + + GA I V D F G D +R++R C
Sbjct: 78 IISLDFDPLA-MAKSYERGGATCISV-VTDQKF---FQGGFDHLRTIRHRIALPLLCKDF 132
Query: 71 ISSIDS-HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
I ++ A A ++ + I LR IH +G + ++ T + L
Sbjct: 133 ILDPCQIYLARSAGADAVLLIAAILTDQEINNFLRVIHYLGMNAILEVHNLTELDRLL-- 190
Query: 130 IDEIDMILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEV-DGGV-TSRNIKSL 186
+++ + I+++N + ST ++ A+ + L V + G+ TS ++ +
Sbjct: 191 --KLEDVRIISINNRSLEDFSVNLSTTQQLMAARRSHLQNLGILVVSESGIETSDHLSLM 248
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRL 213
AG + +++G S Q+ + L
Sbjct: 249 ADAGVNAVLMGDSLLQQENLEEAVRSL 275
>gi|189347613|ref|YP_001944142.1| nicotinate-nucleotide pyrophosphorylase [Chlorobium limicola DSM
245]
gi|189341760|gb|ACD91163.1| nicotinate-nucleotide pyrophosphorylase [Chlorobium limicola DSM
245]
Length = 291
Score = 35.5 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI----DMILIMTVNPGFGG 147
H ++ + ++R A K G+ + ET V LE++ + + D++L+ ++
Sbjct: 174 HIDACGGVGNAVREAVAYRKNNGLDVQIETEVRSLEELAEALPCGPDIVLLDNLSVDMLQ 233
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
Q + A+A S+ LE G V N+ ++ + G D +
Sbjct: 234 QA--------VAFARA--EAPSVKLEASGNVGLHNVAAIAETGVDYI 270
>gi|325068984|ref|ZP_08127657.1| putative dihydroorotate oxidase [Actinomyces oris K20]
Length = 351
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H+ ++ D+ + I + + MG VA N ++ + E
Sbjct: 224 HVPLLVKIAPDL------ADEDIDAVAQMVLDMGLDGVVATN-----TTIDHDLGEG--- 269
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLV 195
G G L+ + +R+ + +G+ + V GG++S + + ++ AGADLL
Sbjct: 270 -------GLSGAPLLPRALEVVRRLRRGLGQEPTIIGV-GGISSVMDAELMLDAGADLLQ 321
Query: 196 VGSSFFNQKGEISYAKRLNDLKKSALA 222
++ F G + L + A
Sbjct: 322 AYTA-FIYNGPAWPGRINRALATGSAA 347
>gi|322661451|gb|EFY57675.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
Length = 366
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 102 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 156
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 157 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 211
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 212 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 252
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 253 DFPISGIGGI--ETWEDAAE 270
>gi|288930637|ref|YP_003434697.1| thiamine-phosphate pyrophosphorylase [Ferroglobus placidus DSM
10642]
gi|288892885|gb|ADC64422.1| thiamine-phosphate pyrophosphorylase [Ferroglobus placidus DSM
10642]
Length = 207
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 23/209 (11%)
Query: 11 ILAADFSRLGEEISNI-TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHL 69
I +ADF EEI+ + KAGA+ I A I + + D +
Sbjct: 12 ITSADFGWKHEEIAEMALKAGARIIQL--------REKRMPARKIYEVARKIRKLCDEYD 63
Query: 70 MISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDV 129
I ++ ++I + D H ++ I GV+++ E
Sbjct: 64 AIFIVNDRLDIAMLSDADG--VHVGKEDPPADKIKEI--FDGIVGVSVDNVEEAKEAESY 119
Query: 130 IDEIDM--ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLV 187
D + + + T P G +E + K+++ I + GG+ N++ ++
Sbjct: 120 ADYVGVGPVFKTTTKPDAGEVIGLEG-LKKVKEVVK------IPVVAIGGINKDNVREVI 172
Query: 188 QAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ AD + V S+ + K K L ++
Sbjct: 173 RI-ADAVAVVSAIASSKDPYKATKELLEI 200
>gi|255327481|ref|ZP_05368548.1| dihydroorotate oxidase [Rothia mucilaginosa ATCC 25296]
gi|283458097|ref|YP_003362711.1| dihydroorotate dehydrogenase [Rothia mucilaginosa DY-18]
gi|255295375|gb|EET74725.1| dihydroorotate oxidase [Rothia mucilaginosa ATCC 25296]
gi|283134126|dbj|BAI64891.1| dihydroorotate dehydrogenase [Rothia mucilaginosa DY-18]
Length = 362
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 21/169 (12%)
Query: 52 DVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK 111
++ ++R +D V + H+ + D++ + +
Sbjct: 207 PLLAAVREEADRVC--------PNRHVPLTVKIAPDLV------DEDVIEVAALAKELKL 252
Query: 112 KTGVAINPETPVAILEDVIDEIDMILIMTVNPGF-GGQQLIESTIPKIRQAKALIGKRSI 170
+A N L DM + + G G L ++ +R K IG
Sbjct: 253 DGIIATNTTIARDGLGLT---SDMTKVKEIGAGGLSGAPLKPRSLEVLRLLKREIGDDLA 309
Query: 171 SLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ V GGVT + +++ + AGAD LV G + F +G + A L K
Sbjct: 310 IISV-GGVTTAEDVQERLDAGAD-LVQGYTAFLYEGPLWAAHINRGLVK 356
>gi|218130645|ref|ZP_03459449.1| hypothetical protein BACEGG_02234 [Bacteroides eggerthii DSM 20697]
gi|317474175|ref|ZP_07933452.1| nicotinate-nucleotide diphosphorylase [Bacteroides eggerthii
1_2_48FAA]
gi|217986989|gb|EEC53320.1| hypothetical protein BACEGG_02234 [Bacteroides eggerthii DSM 20697]
gi|316909746|gb|EFV31423.1| nicotinate-nucleotide diphosphorylase [Bacteroides eggerthii
1_2_48FAA]
Length = 282
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + + I +++ K+ G + E V L+++ +D+ G
Sbjct: 169 HVDFAGGIDKAITRAKEYCKEKGKDLKIEIEVRNLDELQQVLDL-------GGVDRIMFD 221
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
T R+A ++ R E GG+T ++ + G D + VG
Sbjct: 222 NFTPELTRKAVEMVAGR-YETESSGGITFDTLRDYAECGVDFISVG 266
>gi|199599393|ref|ZP_03212789.1| 3-hexulose-6-phosphate synthase related protein [Lactobacillus
rhamnosus HN001]
gi|258509723|ref|YP_003172474.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Lactobacillus
rhamnosus GG]
gi|199589730|gb|EDY97840.1| 3-hexulose-6-phosphate synthase related protein [Lactobacillus
rhamnosus HN001]
gi|257149650|emb|CAR88623.1| Hexulose-6-phosphate synthase [Lactobacillus rhamnosus GG]
gi|259650985|dbj|BAI43147.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Lactobacillus
rhamnosus GG]
Length = 213
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 8/66 (12%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL--LVVGSSFFNQK 204
G E + K++ + + V GG++ +K AG D+ + G +
Sbjct: 141 GGSWGEKDLAKVKMLVDM----GFRVSVTGGLSVDTLKLF--AGVDVYTFIAGRAITQAP 194
Query: 205 GEISYA 210
A
Sbjct: 195 DPAKAA 200
>gi|146284069|ref|YP_001174222.1| thiamine-phosphate pyrophosphorylase [Pseudomonas stutzeri A1501]
gi|189030582|sp|A4VQX9|THIE_PSEU5 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|145572274|gb|ABP81380.1| thiamin-phosphate pyrophosphorylase [Pseudomonas stutzeri A1501]
gi|327482386|gb|AEA85696.1| thiamine-phosphate pyrophosphorylase [Pseudomonas stutzeri DSM
4166]
Length = 213
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+R+A+A I + + GG+T SL+ G ++ V + F +R
Sbjct: 151 LREARARI---GLPIVAIGGITLDTAPSLIAEGVQMIAVIHALFAADSAAEVERR 202
>gi|49475249|ref|YP_033290.1| phosphatase [Bartonella henselae str. Houston-1]
gi|49238054|emb|CAF27261.1| Phosphatase [Bartonella henselae str. Houston-1]
Length = 233
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 56/173 (32%), Gaps = 33/173 (19%)
Query: 49 FGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
D+++ + + HL I+ ++D I + I+ ++ I +
Sbjct: 50 IFPDILKKVEQETGKPTSAHL--------IDQMSDLFRAQIKTELRAIDGIKEAIEAIQS 101
Query: 109 MGKKTGVAINPETPVA---ILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
+ T + + D+ D D + P G ++ + + A+ L
Sbjct: 102 HYPYCICSNARSTEIKEMLTIVDLYDFFDNKDKIFSAPEVGTKKTKPAPDVFLFAAQQLR 161
Query: 166 GKRSISLEVDG---GVTSRNIK-------------------SLVQAGADLLVV 196
K ++ ++ GV + +LV+AGA+ +
Sbjct: 162 VKPKNTIVIEDSIHGVHAATAAGMRVIGFTGGSHSYLGHSNALVEAGAETAIA 214
>gi|312135030|ref|YP_004002368.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
owensensis OL]
gi|311775081|gb|ADQ04568.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
owensensis OL]
Length = 278
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
T+ ++R+A R + +E G V NI+ + + G D++ VGS
Sbjct: 218 FTVDEMRKAIEKAEGR-VLIEASGNVNVDNIEEIAKTGVDIISVGS 262
>gi|311070658|ref|YP_003975581.1| pyridoxal biosynthesis lyase PdxS [Bacillus atrophaeus 1942]
gi|310871175|gb|ADP34650.1| pyridoxal biosynthesis lyase PdxS [Bacillus atrophaeus 1942]
Length = 294
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +AK +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAI 251
>gi|229496093|ref|ZP_04389815.1| beta-eliminating lyase [Porphyromonas endodontalis ATCC 35406]
gi|229316989|gb|EEN82900.1| beta-eliminating lyase [Porphyromonas endodontalis ATCC 35406]
Length = 459
Score = 35.5 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 8/106 (7%)
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI-----DEIDMIL 137
++ D H E A + + E + LE V+ D I +
Sbjct: 121 NSHFDTTKGHIEFRKAAAVDCTIDAAADTQLEIPFKGEMDLEKLEKVLKETPKDRIPCCV 180
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNI 183
+ N GGQ ++ IR+ L K I +++DG + N
Sbjct: 181 LTVTNNTAGGQ---PVSMKNIRETSELCHKYGILVQIDGARFAENA 223
>gi|323439192|gb|EGA96919.1| thiamine-phosphate pyrophosphorylase [Staphylococcus aureus O11]
Length = 49
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ GG+ + N+ +V+AGA+ + V S+ + R D
Sbjct: 2 IVAIGGINTSNVAPIVEAGANGISVISAISKSENIEKTVNRFKDF 46
>gi|206729868|sp|O26652|GGGPS_METTH RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; Short=MtGGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
Length = 245
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I K + I + GG+ + + + AGAD++V G+ N + +
Sbjct: 183 EMIALVKRCTDQ--ILIVG-GGIRSGEDAARVAGAGADVVVTGTVVENSDNVEDKIREI 238
>gi|159043463|ref|YP_001532257.1| thiamine-phosphate diphosphorylase [Dinoroseobacter shibae DFL 12]
gi|157911223|gb|ABV92656.1| thiamine-phosphate diphosphorylase [Dinoroseobacter shibae DFL 12]
Length = 199
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 30/183 (16%)
Query: 25 NITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADA 84
+ G K + V D +VIR+ + + H ++ H +
Sbjct: 19 RLLPLGIKLVQLRVKDQ--------PPEVIRAEIRAAKGLCAEHGCTLVVNDHWQMAIAE 70
Query: 85 GCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVA-------ILEDVIDEIDMIL 137
GCD + E L + A G K G++ + E + + IL
Sbjct: 71 GCDWVHLGQEDLDTAD--LGALRAAGIKLGISTHDEAELDRALACKPAYIALGPIYPTIL 128
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ + I K+ + K+ IG + L GG+T + AGAD++
Sbjct: 129 --------KKMKWEQQGIEKLTEWKSRIG--DVPLIAIGGMTPDRAPGALAAGADVV--- 175
Query: 198 SSF 200
S+
Sbjct: 176 SAV 178
>gi|293609774|ref|ZP_06692076.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828226|gb|EFF86589.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 203
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDVPICAIGGLTVENSKPVIEAGAD 175
>gi|260549685|ref|ZP_05823902.1| thiamine-phosphate pyrophosphorylase [Acinetobacter sp. RUH2624]
gi|260407202|gb|EEX00678.1| thiamine-phosphate pyrophosphorylase [Acinetobacter sp. RUH2624]
Length = 203
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
I K + + + GG+T N K +++AGAD
Sbjct: 141 IEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGAD 175
>gi|238922132|ref|YP_002935646.1| thiamine-phosphate pyrophosphorylase [Eubacterium eligens ATCC
27750]
gi|238873804|gb|ACR73512.1| thiamine-phosphate pyrophosphorylase [Eubacterium eligens ATCC
27750]
Length = 446
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 20/55 (36%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + G +I + GG+ N L G D + V S+ F K L
Sbjct: 174 ERLIEVAGSVNIPVVAIGGIDYDNCGELAGTGVDGIAVVSAIFAADDPGLATKEL 228
>gi|327311888|ref|YP_004338785.1| 3-hexulose-6-phosphate synthase [Thermoproteus uzoniensis 768-20]
gi|326948367|gb|AEA13473.1| 3-hexulose-6-phosphate synthase [Thermoproteus uzoniensis 768-20]
Length = 213
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Query: 101 RSLRTIHAMGKKTGVAINPET-----PVAILEDVIDEI--DMILIMTVNPGFGGQQLIES 153
++ GK+ G+ +T P + +V+D + DM+++ G Q+
Sbjct: 91 ETIEEFARRGKELGLKTALDTIGVASPYDRVREVLDRVTLDMVILHL---GIDVQRRRGL 147
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
T+ ++ I +S+ V GG+ + ++ + D++++G + + L
Sbjct: 148 TVDQLIAEALRIKHLGVSVAVAGGIGQKELEKIAGTEIDVVIIGRAITSAPSPREAFLLL 207
Query: 214 NDL 216
+
Sbjct: 208 KSI 210
>gi|238924878|ref|YP_002938394.1| thiamine-phosphate pyrophosphorylase [Eubacterium rectale ATCC
33656]
gi|238876553|gb|ACR76260.1| thiamine-phosphate pyrophosphorylase [Eubacterium rectale ATCC
33656]
Length = 216
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + I + GG+ + N +L G A + VVG + F + AK L +
Sbjct: 156 LREITAAVDIPVVAIGGINADNAVTLKGTGIAGIAVVG-AIFASADIKAAAKELAGI 211
>gi|113473904|ref|YP_718167.1| hypothetical protein pCAR3_226 [Sphingomonas sp. KA1]
gi|112821584|dbj|BAF03455.1| hypothetical protein [Sphingomonas sp. KA1]
Length = 285
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 16/112 (14%)
Query: 95 SSPHIRRSLR--TIHAMGKK--------TGVAINPETPVAILEDVIDEIDMILIMTVNPG 144
++ H R I G+A E + + D++++I++ L G
Sbjct: 160 ATNHRMRLDDGVLIKDNHIALCGGVERAVGLAKASELEIQVEVDLLEQIELAL----AAG 215
Query: 145 FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
+ +R+A ++G R + +E GGV I+ + + G D V
Sbjct: 216 AERLLCDNMSAAMLREAVKIVGGR-VPIEASGGVRLDTIREIAETGVD-FVS 265
>gi|222055274|ref|YP_002537636.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. FRC-32]
gi|221564563|gb|ACM20535.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. FRC-32]
Length = 489
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 16/140 (11%)
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK-KTGV---AINPETPVAIL 126
+++ I+ + AG D I + H + + + K G+ A N T
Sbjct: 227 TVDMEARIDALMKAGVDAIVI-DTAHGHSQGVIDAVRMAKKNFPGIELIAGNIATA-DAA 284
Query: 127 EDVIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
E +I + + + PG G + I I + K +SL DGG+
Sbjct: 285 EALIKAGVDAIKVGIGPGSICTTRVVAGIGV--PQITAIADCAKVARKYGVSLIADGGIK 342
Query: 180 SR-NIKSLVQAGADLLVVGS 198
+I V AGAD+++VGS
Sbjct: 343 FSGDITKAVAAGADVIMVGS 362
>gi|85373876|ref|YP_457938.1| thiamine-phosphate pyrophosphorylase [Erythrobacter litoralis
HTCC2594]
gi|122544634|sp|Q2NB00|THIE_ERYLH RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|84786959|gb|ABC63141.1| thiamine-phosphate pyrophosphorylase [Erythrobacter litoralis
HTCC2594]
Length = 213
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI---SYAKRLND 215
I GG+T N + L++AGAD L V + ++ ++A+++
Sbjct: 164 IPCVAIGGITPDNCQPLIEAGADFLAVSGAVWSGDERAAVQAFAEQIAA 212
>gi|87123296|ref|ZP_01079147.1| thiamin biosynthesis protein [Synechococcus sp. RS9917]
gi|86169016|gb|EAQ70272.1| thiamin biosynthesis protein [Synechococcus sp. RS9917]
Length = 275
Score = 35.5 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 114 GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSIS 171
G + P L ++E+ +M + G GQ + +I +
Sbjct: 145 GFTVLPYINADPLLAKRLEEVGCATVMPLGSPIGSGQG-----LRNAANIALIIENAGVP 199
Query: 172 LEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
+ VD G+ ++ GAD ++V S+ S A+ + D ++
Sbjct: 200 VVVDAGIGVPSEAAQALEMGADAVLVNSAIALAGDPASMAEAMADAVRA 248
>gi|326773159|ref|ZP_08232442.1| dihydroorotate oxidase [Actinomyces viscosus C505]
gi|326636389|gb|EGE37292.1| dihydroorotate oxidase [Actinomyces viscosus C505]
Length = 351
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 24/147 (16%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H+ ++ D+ + I + + MG VA N ++ + E
Sbjct: 224 HVPLLVKIAPDL------ADEDIDAVAQMVLDMGLDGVVATN-----TTIDHDLGEG--- 269
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLV 195
G G L+ + +R+ + +G+ + V GG++S + + ++ AGADLL
Sbjct: 270 -------GLSGAPLLPRALEVVRRLRRGLGQEPTIIGV-GGISSVMDAELMLDAGADLLQ 321
Query: 196 VGSSFFNQKGEISYAKRLNDLKKSALA 222
++ F G + L + A
Sbjct: 322 AYTA-FIYNGPAWPGRINRALATGSAA 347
>gi|296809199|ref|XP_002844938.1| 5-proFAR isomerase [Arthroderma otae CBS 113480]
gi|238844421|gb|EEQ34083.1| 5-proFAR isomerase [Arthroderma otae CBS 113480]
Length = 258
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
+ KA G V GG+T +N + + AGA+ +VV S F RL +
Sbjct: 69 VEALKAWPGGLH----VAGGITDKNAQYWLDAGAEKVVVTSYLF--PDARFSIDRLRSIL 122
Query: 218 KS 219
+
Sbjct: 123 AA 124
>gi|196248403|ref|ZP_03147104.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. G11MC16]
gi|196212128|gb|EDY06886.1| thiamine-phosphate pyrophosphorylase [Geobacillus sp. G11MC16]
Length = 221
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 161 AKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ L + +I + GG+T+ N +++++AGAD + V S+
Sbjct: 158 LRHLREQGITIPIVAIGGITADNTRAVIEAGADGVSVISAI 198
>gi|254418693|ref|ZP_05032417.1| KDPG and KHG aldolase subfamily [Brevundimonas sp. BAL3]
gi|196184870|gb|EDX79846.1| KDPG and KHG aldolase subfamily [Brevundimonas sp. BAL3]
Length = 210
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFN 202
GGV N+ + AGAD +GS+ +
Sbjct: 160 GGVDPDNMGAWRAAGADGFGIGSALYR 186
>gi|163746777|ref|ZP_02154134.1| thiamine-phosphate pyrophosphorylase [Oceanibulbus indolifex
HEL-45]
gi|161379891|gb|EDQ04303.1| thiamine-phosphate pyrophosphorylase [Oceanibulbus indolifex
HEL-45]
Length = 198
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
H + + G D + E + I G K G++ + + + D
Sbjct: 61 DHWQLAIELGVDWLHLGQEDLDTAD--IPAIRRAGMKLGLSTHDHAELERALALAP--DY 116
Query: 136 ILIMTVNPGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
I + V P + + E + ++ + KA IG I L GG++ AGAD++
Sbjct: 117 IALGPVYPTILKKMKWTEQGLDRLTEWKARIG--DIPLCAIGGMSVARAPGAFAAGADMV 174
Query: 195 VV 196
Sbjct: 175 AA 176
>gi|138895024|ref|YP_001125477.1| thiamine-phosphate pyrophosphorylase [Geobacillus
thermodenitrificans NG80-2]
gi|166228073|sp|A4IN28|THIE_GEOTN RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|134266537|gb|ABO66732.1| Thiamin-phosphate pyrophosphorylase [Geobacillus
thermodenitrificans NG80-2]
Length = 221
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 161 AKALIGKR-SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+ L + +I + GG+T+ N +++++AGAD + V S+
Sbjct: 158 LRHLREQGITIPIVAIGGITADNTRAVIEAGADGVSVISAI 198
>gi|121535212|ref|ZP_01667027.1| tryptophan synthase, alpha subunit [Thermosinus carboxydivorans
Nor1]
gi|121306203|gb|EAX47130.1| tryptophan synthase, alpha subunit [Thermosinus carboxydivorans
Nor1]
Length = 271
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 74/241 (30%), Gaps = 41/241 (17%)
Query: 13 AADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGA--------------------D 52
DF+ E + + AGA I + F ++ G +
Sbjct: 27 CPDFAATLEAVQAVEAAGANIIEIGI---PFSDPMADGPVIQKAASLALQGGATTGKVLE 83
Query: 53 VIRSLRSYSDSVFDCHLMISSI-----DSHINIIADAGCDIITFHPESSPHIRRSLRTIH 107
++R +R S I+++ + + A AG D + +
Sbjct: 84 LVRQIRQKSAIPLVVMTYINTVLQFGVEKFVRSFAQAGLDGLIV----PDLPVEESALLE 139
Query: 108 AMGKKTGVA----INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
++ G+A I P T + + L G G + + +I
Sbjct: 140 NYCREAGLALIQFIAPTTAPERAVTICHKAAGFLYCISATGVTG--VRQVDYSQIGSLIN 197
Query: 164 LIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQ--KGEISYAKRLNDLKKSA 220
+ + + G G+ S AD +++GS+ Q + A+ + + A
Sbjct: 198 NVRQYTSLPVAIGFGIGSPQAAREAADYADAVIIGSAIMQQLIDKGVDAARAFTESVRLA 257
Query: 221 L 221
L
Sbjct: 258 L 258
>gi|146296720|ref|YP_001180491.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410296|gb|ABP67300.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 488
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
+ + + A D+I T H S + +++ I A V D
Sbjct: 229 KDTEQRVEALVKAQVDVIVVDTAHG-HSKGVIETVKKIKAKYPNLQVVAGNIATAEAAYD 287
Query: 129 VIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I + + + PG G + I I + + I + DGG+
Sbjct: 288 LIKAGADCIKVGIGPGSICTTRVVAGVGV--PQITAIMDCAEVAKEYGIPVIADGGIRYS 345
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGAD++++GS
Sbjct: 346 GDITKALAAGADVVMIGS 363
>gi|313772352|gb|EFS38318.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL074PA1]
gi|313830785|gb|EFS68499.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL007PA1]
gi|313834004|gb|EFS71718.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL056PA1]
gi|314973211|gb|EFT17307.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL053PA1]
gi|314975883|gb|EFT19978.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL045PA1]
gi|314983581|gb|EFT27673.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL005PA1]
gi|315096120|gb|EFT68096.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL038PA1]
gi|327326039|gb|EGE67829.1| thiamine-phosphate diphosphorylase [Propionibacterium acnes
HL096PA2]
gi|327446079|gb|EGE92733.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL043PA2]
gi|327447940|gb|EGE94594.1| thiamine-phosphate pyrophosphorylase [Propionibacterium acnes
HL043PA1]
gi|328760460|gb|EGF74028.1| thiamine-phosphate diphosphorylase [Propionibacterium acnes
HL099PA1]
Length = 216
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 22/200 (11%)
Query: 21 EEISNITKAGAKQIHF---DVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSH 77
E + + G + F D+ D FV + G V S L+I D
Sbjct: 27 ETVRHAIAGGVTLVQFRDHDLSDDEFV---ALGRRVREICVSGG-----VPLII---DDR 75
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
++++A+ G D H S R I G++ TP + + D++
Sbjct: 76 VHLVAEIGADG--VHVGQSDMPVDQARAILGDDLLIGLSAQ--TPAHVEAALSQGRDIVD 131
Query: 138 IMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-V 195
+ V +G G + + + + + ++ + V GGV++ + + + + G D L V
Sbjct: 132 YLGVGALYGTGTKPEAGELG-LAEIRDVVNASPWPVCVIGGVSASDAQDVARVGCDGLSV 190
Query: 196 VGSSFFNQKGEISYAKRLND 215
V S+ S A+ L +
Sbjct: 191 V-SAICRSTDPKSSARELAE 209
>gi|302872346|ref|YP_003840982.1| pyridoxine biosynthesis protein [Caldicellulosiruptor obsidiansis
OB47]
gi|302575205|gb|ADL42996.1| pyridoxine biosynthesis protein [Caldicellulosiruptor obsidiansis
OB47]
Length = 296
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + ++Q GAD + VGS+ F K A+ +
Sbjct: 215 GGIATPADAALMMQLGADGVFVGSAIFKSKNPEKRARAI 253
>gi|289577837|ref|YP_003476464.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter italicus
Ab9]
gi|289527550|gb|ADD01902.1| thiamine-phosphate pyrophosphorylase [Thermoanaerobacter italicus
Ab9]
Length = 209
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSL-VQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I K + SI + GG+T N + +++G D + S+ F E + K L +
Sbjct: 143 IEGLKKIKEAVSIPVVAIGGITKDNAYEVMLKSGVDGISSVSAVFYGDIENNTRKLLEVI 202
Query: 217 KKSALAI 223
K+ A+
Sbjct: 203 AKAIKAL 209
>gi|258512254|ref|YP_003185688.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-
hydroxy-2-oxoglutarate aldolase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478980|gb|ACV59299.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-
hydroxy-2-oxoglutarate aldolase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 208
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 160 QAKALIGK-RSISLEVDGGVTSRNIKSLVQAGADLLV-VGSSFF-----NQKGEISYAKR 212
+ L G + + V GGV+ N ++ + AGA + V VGSS F + S AKR
Sbjct: 140 YLRDLRGPFKDLKAMVTGGVSEDNARAFLDAGA-VAVGVGSSLFPKADLEARDYASIAKR 198
Query: 213 LNDLKK 218
L +
Sbjct: 199 AERLVR 204
>gi|225026127|ref|ZP_03715319.1| hypothetical protein EUBHAL_00368 [Eubacterium hallii DSM 3353]
gi|224956564|gb|EEG37773.1| hypothetical protein EUBHAL_00368 [Eubacterium hallii DSM 3353]
Length = 258
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+RQA + L++ GG+T+ N ++ GA ++V S F G+I+Y + L +
Sbjct: 71 VRQACLALSAYPGGLQIGGGMTAENAAFFLEQGASHIIVTSYVFK-DGKINY-ENLEKI 127
>gi|71894054|ref|YP_278162.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Mycoplasma synoviae
53]
gi|71850842|gb|AAZ43451.1| 3-hexulose-6- phosphate synthase [Mycoplasma synoviae 53]
Length = 217
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
G + ++ I +++ + + V GGVT +IK + + G + + +
Sbjct: 147 GVKWNQNDIDSVKKLANM----GFKVTVTGGVTKEDIKLFKGIPIYIFIAGRTIYGAENP 202
Query: 207 ISYAKRLND 215
AK L D
Sbjct: 203 ELAAKELKD 211
>gi|85702852|ref|ZP_01033956.1| glutamate synthase family protein [Roseovarius sp. 217]
gi|85671780|gb|EAQ26637.1| glutamate synthase family protein [Roseovarius sp. 217]
Length = 447
Score = 35.5 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQ-- 203
GQ ++ +R + L R + L V GG+ T ++ + GAD + +G++
Sbjct: 276 GQPILACIREAVRALQDLGMHRQVQLIVSGGIRTGADVAKCMALGADAVAIGTAALIALG 335
Query: 204 KGEISYAKRLNDLKKSALAID 224
+ + N L +A A D
Sbjct: 336 DNDPKWEAEYNKLGTTAGAYD 356
>gi|299138150|ref|ZP_07031330.1| histidine biosynthesis protein [Acidobacterium sp. MP5ACTX8]
gi|298600080|gb|EFI56238.1| histidine biosynthesis protein [Acidobacterium sp. MP5ACTX8]
Length = 252
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 159 RQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLK 217
R+ +I KR + +V GG+ T + + L+ AGA ++ GSS FN G LK
Sbjct: 85 RELIEMICKR-LPCQVGGGLRTPEDGQRLLDAGAKRVIYGSSLFNSDGVDKVFAA--SLK 141
Query: 218 KS 219
K+
Sbjct: 142 KA 143
>gi|228905811|ref|ZP_04069710.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis IBL 200]
gi|228853819|gb|EEM98577.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis IBL 200]
Length = 295
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPERFARAI 252
>gi|222099309|ref|YP_002533877.1| Dihydroorotate dehydrogenase [Thermotoga neapolitana DSM 4359]
gi|221571699|gb|ACM22511.1| Dihydroorotate dehydrogenase [Thermotoga neapolitana DSM 4359]
Length = 270
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVD--GGV-TSRNIKSLVQAGADLLVVGSSF 200
G G L + + + K + L V GGV + ++ + ++ GAD++ VGS+
Sbjct: 196 GLSGPVLKPIALRAVYEVKKRFPE----LFVIASGGVYSVKDAEEFLKVGADVIGVGSAL 251
Query: 201 FNQKGEISYA-KRLNDLKK 218
F G + K L ++K+
Sbjct: 252 FKDPGVVEEIGKYLLEVKR 270
>gi|205371954|ref|ZP_03224773.1| pyridoxine biosynthesis protein [Bacillus coahuilensis m4-4]
Length = 293
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +AK +
Sbjct: 212 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFAKAI 250
>gi|149194981|ref|ZP_01872074.1| PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE
RIBOTIDEISOMERASE [Caminibacter mediatlanticus TB-2]
gi|149134902|gb|EDM23385.1| PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE
RIBOTIDEISOMERASE [Caminibacter mediatlanticus TB-2]
Length = 235
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADL 193
+ I+ +N F G+ I KIR+ ++ +++ GG+ IK + G +
Sbjct: 46 WLHIVDLNGAFAGEPKNIEAIKKIRE------NTNLKIQLGGGIRDEDTIKRYLDLGINR 99
Query: 194 LVVGS 198
L++GS
Sbjct: 100 LILGS 104
>gi|57233798|ref|YP_182126.1| nicotinate phosphoribosyltransferase [Dehalococcoides ethenogenes
195]
gi|57224246|gb|AAW39303.1| nicotinate-nucleotide pyrophosphorylase, putative [Dehalococcoides
ethenogenes 195]
Length = 333
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 152 ESTIPKIRQAKA---LIGKRSISLEVDGGVTSRNIKSLVQ--AGADLLVVGSSFFNQKGE 206
T +++ +A + G + + V GG+T I+ + A D GS +
Sbjct: 241 RVTADLVKEVRANLDMAGHNHVKIFVSGGLTPERIRYFAENNAPVDGYGTGSYI-SGARP 299
Query: 207 ISYAKRLNDLKKSALA 222
I + L+++ A+A
Sbjct: 300 IDFTADLHEIAGKAVA 315
>gi|262280381|ref|ZP_06058165.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase
[Acinetobacter calcoaceticus RUH2202]
gi|262258159|gb|EEY76893.1| phosphoribosylformimino-5-aminoimidazole carboxamide isomerase
[Acinetobacter calcoaceticus RUH2202]
Length = 243
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA + ++E + ++ +N F G + + + I +A + + +++ GG+
Sbjct: 30 DDPVATAQHWVNEGARRLHLVDLNGAFAGTPIHKPIVEAIAKA-----QPELPIQIGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ ++AG +++G+
Sbjct: 85 RSLETIEHYLEAGVTFVIIGT 105
>gi|253582896|ref|ZP_04860114.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium varium ATCC
27725]
gi|251835102|gb|EES63645.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium varium ATCC
27725]
Length = 484
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 14/131 (10%)
Query: 78 INIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + AG DIIT H S + R +R I + D+I
Sbjct: 234 VEALVRAGVDIITVDSAHG-HSAGVIRKIREIREAFPDLNLIGGNIVTAEAALDLIAAGV 292
Query: 135 MILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSL 186
+ + + PG G + + + + R I + DGG+ +I
Sbjct: 293 NAVKVGIGPGSICTTRVVAGVGV--PQLTAVNDVYQVCKDRGIGVIADGGIKLSGDIVKA 350
Query: 187 VQAGADLLVVG 197
+ AGAD +++G
Sbjct: 351 LAAGADCVMLG 361
>gi|222093784|ref|YP_002527832.1| pyridoxal biosynthesis lyase pdxs [Bacillus cereus Q1]
gi|254781590|sp|B9IYH8|PDXS_BACCQ RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|221237830|gb|ACM10540.1| 4-hydroxythreonine-4-phosphate dehydrogenase (pyridoxine
biosynthesis protein) [Bacillus cereus Q1]
Length = 295
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPAKFARAI 252
>gi|254468870|ref|ZP_05082276.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [beta proteobacterium KB13]
gi|207087680|gb|EDZ64963.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [beta proteobacterium KB13]
Length = 245
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ ++ F GQ + +P IR+ +G+ + +++ GG+ ++SL+ AG D +
Sbjct: 47 LHLVDLDGAFAGQ---QKNLPVIREVIQEMGE--VPIQLGGGIRNLDTVESLINAGIDSV 101
Query: 195 VVGSSFFNQKG 205
++G++ G
Sbjct: 102 IIGTAAITNPG 112
>gi|188990310|ref|YP_001902320.1| thiamine-phosphate pyrophosphorylase [Xanthomonas campestris pv.
campestris str. B100]
gi|167732070|emb|CAP50262.1| thiamine-phosphate diphosphorylase [Xanthomonas campestris pv.
campestris]
Length = 235
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+T + LV AGADL+ V S + ++ +
Sbjct: 191 IGGITPSQVPELVTAGADLIAVVSGVYAAADPVAAVQAYRA 231
>gi|159905912|ref|YP_001549574.1| thiamine-phosphate pyrophosphorylase [Methanococcus maripaludis C6]
gi|238686983|sp|A9AAG9|THIE_METM6 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|159887405|gb|ABX02342.1| thiamine-phosphate pyrophosphorylase [Methanococcus maripaludis C6]
Length = 207
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLKK 218
K + SI + GG+ N++++++ G + VV S+ + + A+ +N+L K
Sbjct: 146 LKNISKIASIPIVAIGGINHLNVENVLECGVSGVAVV-SAIVGAENILKSAENMNELIK 203
>gi|42779092|ref|NP_976339.1| pyridoxal biosynthesis lyase PdxS [Bacillus cereus ATCC 10987]
gi|49476690|ref|YP_034370.1| pyridoxal biosynthesis lyase PdxS [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145199|ref|YP_081629.1| pyridoxine biosynthesis protein [Bacillus cereus E33L]
gi|196036352|ref|ZP_03103749.1| pyridoxine biosynthesis protein [Bacillus cereus W]
gi|196041976|ref|ZP_03109263.1| pyridoxine biosynthesis protein [Bacillus cereus NVH0597-99]
gi|196047698|ref|ZP_03114902.1| pyridoxine biosynthesis protein [Bacillus cereus 03BB108]
gi|206978349|ref|ZP_03239223.1| pyridoxine biosynthesis protein [Bacillus cereus H3081.97]
gi|217957591|ref|YP_002336133.1| pyridoxal biosynthesis lyase PdxS [Bacillus cereus AH187]
gi|218901216|ref|YP_002449050.1| pyridoxine biosynthesis protein [Bacillus cereus AH820]
gi|225862067|ref|YP_002747445.1| pyridoxine biosynthesis protein [Bacillus cereus 03BB102]
gi|228912753|ref|ZP_04076402.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228925268|ref|ZP_04088366.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931517|ref|ZP_04094425.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943821|ref|ZP_04106208.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228983270|ref|ZP_04143485.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089146|ref|ZP_04220430.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock3-42]
gi|229119677|ref|ZP_04248940.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus 95/8201]
gi|229136858|ref|ZP_04265487.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BDRD-ST26]
gi|229153794|ref|ZP_04281926.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus ATCC 4342]
gi|229182409|ref|ZP_04309662.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BGSC 6E1]
gi|229194405|ref|ZP_04321210.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus m1293]
gi|301051751|ref|YP_003789962.1| pyridoxine biosynthesis protein [Bacillus anthracis CI]
gi|68565713|sp|Q63HF8|PDXS_BACCZ RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|68565748|sp|Q6HQ05|PDXS_BACHK RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|68565762|sp|Q73FJ5|PDXS_BACC1 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|254781585|sp|B7JJC6|PDXS_BACC0 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|254781587|sp|C1ES17|PDXS_BACC3 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|254781589|sp|B7HPS6|PDXS_BACC7 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|42735007|gb|AAS38947.1| pyridoxine biosynthesis protein [Bacillus cereus ATCC 10987]
gi|49328246|gb|AAT58892.1| 4-hydroxythreonine-4-phosphate dehydrogenase (pyridoxine
biosynthesis protein) [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51978668|gb|AAU20218.1| 4-hydroxythreonine-4-phosphate dehydrogenase (pyridoxine
biosynthesis protein) [Bacillus cereus E33L]
gi|195990982|gb|EDX54953.1| pyridoxine biosynthesis protein [Bacillus cereus W]
gi|196021483|gb|EDX60186.1| pyridoxine biosynthesis protein [Bacillus cereus 03BB108]
gi|196027231|gb|EDX65851.1| pyridoxine biosynthesis protein [Bacillus cereus NVH0597-99]
gi|206743441|gb|EDZ54874.1| pyridoxine biosynthesis protein [Bacillus cereus H3081.97]
gi|217066171|gb|ACJ80421.1| pyridoxine biosynthesis protein [Bacillus cereus AH187]
gi|218537834|gb|ACK90232.1| pyridoxine biosynthesis protein [Bacillus cereus AH820]
gi|225788736|gb|ACO28953.1| pyridoxine biosynthesis protein [Bacillus cereus 03BB102]
gi|228589061|gb|EEK47074.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus m1293]
gi|228601055|gb|EEK58622.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BGSC 6E1]
gi|228629663|gb|EEK86358.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus ATCC 4342]
gi|228646593|gb|EEL02798.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BDRD-ST26]
gi|228663768|gb|EEL19345.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus 95/8201]
gi|228694187|gb|EEL47866.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock3-42]
gi|228776450|gb|EEM24801.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228815845|gb|EEM62079.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228828135|gb|EEM73861.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834382|gb|EEM79921.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846880|gb|EEM91883.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|300373920|gb|ADK02824.1| pyridoxine biosynthesis protein [Bacillus cereus biovar anthracis
str. CI]
gi|324324004|gb|ADY19264.1| pyridoxal biosynthesis lyase PdxS [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 295
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPAKFARAI 252
>gi|11465848|ref|NP_053992.1| tryptophan synthase alpha subunit [Porphyra purpurea]
gi|1717756|sp|P51382|TRPA_PORPU RecName: Full=Tryptophan synthase alpha chain
gi|1276848|gb|AAC08268.1| tryptophan synthase alpha subunit [Porphyra purpurea]
Length = 273
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIR 159
+ + ++P + + + ++++ + + G GQ+ K++
Sbjct: 144 DYIISVCKLFNIELIFLLSPTSSIERINKIVEQAPGCIYLVSTTGVTGQK--PELTGKLK 201
Query: 160 QAKALIGKRSISLEVDG-GV-TSRNIKSLVQAGADLLVVGSSF---FNQKGEISYAKRLN 214
+ I K + + G G+ T+ IK + + +V+GS+F + +++
Sbjct: 202 RLTETIKKMTQKPIILGFGISTAEQIKEIKGWNINGIVIGSAFVKRLSSDFPEEGLRKIK 261
Query: 215 DLKKSALAI 223
D +A +I
Sbjct: 262 DFCTTAKSI 270
>gi|15678580|ref|NP_275695.1| geranylgeranylglyceryl phosphate synthase-like protein
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2621628|gb|AAB85058.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 248
Score = 35.5 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 156 PKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
I K + I + GG+ + + + AGAD++V G+ N + +
Sbjct: 186 EMIALVKRCTDQ--ILIVG-GGIRSGEDAARVAGAGADVVVTGTVVENSDNVEDKIREI 241
>gi|313622910|gb|EFR93215.1| pyridoxine biosynthesis protein [Listeria innocua FSL J1-023]
Length = 143
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F +A +
Sbjct: 62 GGVATPADAALMMELGADGVFVGSGIFKSDNPAKFASAI 100
>gi|307154021|ref|YP_003889405.1| nicotinate-nucleotide pyrophosphorylase [Cyanothece sp. PCC 7822]
gi|306984249|gb|ADN16130.1| nicotinate-nucleotide pyrophosphorylase [Cyanothece sp. PCC 7822]
Length = 285
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 13/105 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H +++ I ++ I + T + +++ + LIM N
Sbjct: 171 HIQAAGGIETAIAKIRSSIPYPLTVEVETTNLEEVKEALS-GGADLIMLDN--------- 220
Query: 152 ESTIPKIRQAKALIGKRSIS--LEVDGGVTSRNIKSLVQAGADLL 194
T+ +++QA +I +R+ +E G +T N++S+ G D +
Sbjct: 221 -MTLEQMQQAVQVIRERNNKTKIEASGNITLHNLRSVALTGVDYI 264
>gi|296391240|ref|ZP_06880715.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas aeruginosa
PAb1]
Length = 95
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 119 PETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
P PV + + +DE+ L G L E ++ +R A AL R+ LE GG+
Sbjct: 5 PGKPVEVEVENLDELRQAL----EAGADIVMLDELSLDDMRTAVALTAGRA-KLEASGGI 59
Query: 179 TSRNIKSLVQAGADLLVVGS 198
++++ + G D + +G+
Sbjct: 60 NESTLRNIAETGVDYISIGT 79
>gi|193214909|ref|YP_001996108.1| inosine-5'-monophosphate dehydrogenase [Chloroherpeton thalassium
ATCC 35110]
gi|193088386|gb|ACF13661.1| inosine-5'-monophosphate dehydrogenase [Chloroherpeton thalassium
ATCC 35110]
Length = 495
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 14/132 (10%)
Query: 78 INIIADAGCDIITF-----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + +A D I H E+ + + + I V D+I
Sbjct: 238 VAALVEANVDAIAVDTAHGHSEA---VLKMVEKIKNAYPTLNVIAGNVATAEGTRDLIAA 294
Query: 133 IDMILIMTVNPGF-GGQQLIE----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSL 186
+ + + PG ++I + + K I + DGG+ +I
Sbjct: 295 GADCVKVGIGPGSICTTRVIAGVGVPQLTAVMNCAEEAKKAGIPIIADGGIKYSGDIAKA 354
Query: 187 VQAGADLLVVGS 198
+ AGAD ++VGS
Sbjct: 355 IAAGADGVMVGS 366
>gi|168207794|ref|ZP_02633799.1| thiamine monophosphate synthase family protein [Clostridium
perfringens E str. JGS1987]
gi|170660879|gb|EDT13562.1| thiamine monophosphate synthase family protein [Clostridium
perfringens E str. JGS1987]
Length = 193
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ +I I I++ K + + I+L GG+ N K ++ AGAD S F +
Sbjct: 128 KGVIPKGINFIKEIKEKVNCKVIAL---GGINELNFKEVLGAGADDFACMSLLFMRNNIK 184
Query: 208 SYAKRLNDL 216
L
Sbjct: 185 KSLDTFKAL 193
>gi|163731515|ref|ZP_02138962.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Roseobacter
litoralis Och 149]
gi|161394969|gb|EDQ19291.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Roseobacter
litoralis Och 149]
Length = 201
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 22/129 (17%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
H+ +ADAG +I P P + R+ + M G+ P + L+
Sbjct: 68 HVAAVADAGGKLI-VSPNCDPDVIRATKA-RDMQSWPGI-FTPTEAFSALK--------- 115
Query: 137 LIMTVNPGFGGQQLIESTI---PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADL 193
G G +L + + +A++ ++ V GG N ++ + A AD
Sbjct: 116 ------AGADGLKLFPGAMAGPSGLAAMRAILPAGTLVYAV-GGAGPENFQTWIDASADG 168
Query: 194 LVVGSSFFN 202
+GS+ F
Sbjct: 169 FGLGSALFK 177
>gi|118475788|ref|YP_892939.1| pyridoxal biosynthesis lyase PdxS [Bacillus thuringiensis str. Al
Hakam]
gi|118415013|gb|ABK83432.1| pyridoxal phosphate synthase yaaD subunit [Bacillus thuringiensis
str. Al Hakam]
Length = 297
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 216 GGVATPADAALMMQLGADGVFVGSGIFKSENPAKFARAI 254
>gi|260438852|ref|ZP_05792668.1| inosine-5'-monophosphate dehydrogenase [Butyrivibrio crossotus DSM
2876]
gi|292808691|gb|EFF67896.1| inosine-5'-monophosphate dehydrogenase [Butyrivibrio crossotus DSM
2876]
Length = 484
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 14/140 (10%)
Query: 70 MISSIDSHINIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
+ S++ + + +A D I H S +I +++ I A + V
Sbjct: 224 ITSNVMDRVAALVEAKVDCIVIDSAHG-HSKNIIETVKKIKAAYPELQVIAGNIATGEAA 282
Query: 127 EDVIDEIDMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+ +I+ + + + PG G + I I A + I L DGG+
Sbjct: 283 KALIEAGVDCVKVGIGPGSICTTRVVAGIGV--PQISAIMDVYATTRQYGIPLIADGGIK 340
Query: 180 SR-NIKSLVQAGADLLVVGS 198
++ + AGAD+ ++GS
Sbjct: 341 FSGDLTKAIAAGADVCMMGS 360
>gi|238754452|ref|ZP_04615807.1| Nicotinate-nucleotide pyrophosphorylase [carboxylating] [Yersinia
ruckeri ATCC 29473]
gi|238707281|gb|EEP99643.1| Nicotinate-nucleotide pyrophosphorylase [carboxylating] [Yersinia
ruckeri ATCC 29473]
Length = 298
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
I+P+ PV + + +DE++ L + G L TIP + A L R+ LEV G
Sbjct: 205 IHPDVPVEVEVESLDELEQAL----DAGADIIMLDNFTIPMMHDAVKLTNHRA-QLEVSG 259
Query: 177 GVTSRNIKSLVQAGADLLVVG 197
VT I+ + G D + VG
Sbjct: 260 NVTLETIRRYAETGIDFISVG 280
>gi|262199323|ref|YP_003270532.1| 2,4-diaminobutyrate 4-transaminase [Haliangium ochraceum DSM 14365]
gi|262082670|gb|ACY18639.1| 2,4-diaminobutyrate 4-transaminase [Haliangium ochraceum DSM 14365]
Length = 455
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 108 AMGKKTGVAINPETP----VAILEDVIDEI------DMILIMTVNPGFGGQQLIESTIPK 157
+ ++ +A+ P+T V LE V+D++ +IM V G GG +I +T
Sbjct: 195 SYCRRCPLALKPDTCSTNCVQYLERVLDDVNGGVPTPAAVIMEVVQGEGG--VIPATPTF 252
Query: 158 IRQAKALIGKRSISLEVD 175
R+ + + +R I L VD
Sbjct: 253 AREVRRITRERDIPLIVD 270
>gi|222152136|ref|YP_002561296.1| pyridoxine biosynthesis protein [Macrococcus caseolyticus JCSC5402]
gi|254781612|sp|B9E8T2|PDXS_MACCJ RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|222121265|dbj|BAH18600.1| pyridoxine biosynthesis protein [Macrococcus caseolyticus JCSC5402]
Length = 295
Score = 35.5 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPADAALMMELGADGVFVGSGIFKSESPEKFAKAI 252
>gi|253565790|ref|ZP_04843245.1| thiamine-phosphate pyrophosphorylase [Bacteroides sp. 3_2_5]
gi|251946069|gb|EES86476.1| thiamine-phosphate pyrophosphorylase [Bacteroides sp. 3_2_5]
Length = 204
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 163 ALIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
A + + I + V GG+ + +I +++ G + + + + I KR+ ++
Sbjct: 149 AQMNEADIRIPVVAIGGIVAEDIPPIMETGVNGIALSGAILQAPDPIEETKRILNI 204
>gi|238927847|ref|ZP_04659607.1| thiamine-phosphate diphosphorylase [Selenomonas flueggei ATCC
43531]
gi|238884292|gb|EEQ47930.1| thiamine-phosphate diphosphorylase [Selenomonas flueggei ATCC
43531]
Length = 219
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRL 213
K + ++ + GG+ N+ L +G A + V+ S+ F +K A+RL
Sbjct: 157 LKEICSAAAVPVVAIGGINDENVMQLAGSGIAGIAVI-SAIFAKKDIRIAAQRL 209
>gi|218895151|ref|YP_002443562.1| pyridoxine biosynthesis protein [Bacillus cereus G9842]
gi|228963112|ref|ZP_04124283.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
sotto str. T04001]
gi|254781586|sp|B7IS29|PDXS_BACC2 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|218541124|gb|ACK93518.1| pyridoxine biosynthesis protein [Bacillus cereus G9842]
gi|228796568|gb|EEM44005.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 295
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPERFARAI 252
>gi|170288398|ref|YP_001738636.1| dihydroorotate dehydrogenase family protein [Thermotoga sp. RQ2]
gi|170175901|gb|ACB08953.1| dihydroorotate dehydrogenase family protein [Thermotoga sp. RQ2]
Length = 270
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVD--GGV-TSRNIKSLVQAGADLLVVGSSF 200
G G L + + + K + L V GGV + ++ + ++ GAD++ VGS+
Sbjct: 196 GLSGPVLKPIALRAVYEVKKRFPE----LFVIASGGVYSVKDAEEFLKVGADVIGVGSAL 251
Query: 201 FNQKGEISYA-KRLNDLKK 218
F G + K L ++K+
Sbjct: 252 FKDPGVVEEIGKYLLEVKR 270
>gi|94968189|ref|YP_590237.1| tryptophan synthase, alpha chain [Candidatus Koribacter versatilis
Ellin345]
gi|94550239|gb|ABF40163.1| tryptophan synthase, alpha chain [Candidatus Koribacter versatilis
Ellin345]
Length = 261
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 20/180 (11%)
Query: 52 DVIRSLRSYSDSVFDCHLMISSIDSH-INII----ADAGCDIITFHPESSPHIRRSLRTI 106
V R +R ++D+ ++ + + + A+AG D + L +
Sbjct: 75 HVAREVRRHTDAGLIVFSYMNPLLRYGLEKFCADAANAGVDGVLVTDLPVEEAGPYLAAM 134
Query: 107 HAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG--QQLIESTIPKIRQAKAL 164
+ P +P A L+ + + + G G Q++ +++ +
Sbjct: 135 SKHNLDPIFLVAPTSPDARLKLIAEHSRGFVYAVSRTGVTGTRQEVASDARDLVKRLRQF 194
Query: 165 IGKRSISLEVDGGVTSRNIKSLVQAG--ADLLVVGSSF----FNQKG--EISYAKRLNDL 216
+ + V G N + + G AD V+GS+ F+ G + L L
Sbjct: 195 TK---LPIAV--GFGVSNAEQFAEVGRFADAAVIGSAIMQRVFDNPGSEPEAVKAFLRGL 249
>gi|30260204|ref|NP_842581.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str. Ames]
gi|47525266|ref|YP_016615.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183049|ref|YP_026301.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str. Sterne]
gi|65317477|ref|ZP_00390436.1| COG0214: Pyridoxine biosynthesis enzyme [Bacillus anthracis str.
A2012]
gi|165873239|ref|ZP_02217850.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0488]
gi|167635027|ref|ZP_02393344.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0442]
gi|167641732|ref|ZP_02399975.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0193]
gi|170688906|ref|ZP_02880108.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0465]
gi|170707502|ref|ZP_02897955.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0389]
gi|177655683|ref|ZP_02937008.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0174]
gi|190569331|ref|ZP_03022223.1| pyridoxine biosynthesis protein [Bacillus anthracis Tsiankovskii-I]
gi|227812688|ref|YP_002812697.1| pyridoxine biosynthesis protein [Bacillus anthracis str. CDC 684]
gi|229604286|ref|YP_002864666.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0248]
gi|254686603|ref|ZP_05150462.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str.
CNEVA-9066]
gi|254724156|ref|ZP_05185941.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str. A1055]
gi|254737009|ref|ZP_05194714.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str. Western
North America USA6153]
gi|254744207|ref|ZP_05201888.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str. Kruger
B]
gi|254755971|ref|ZP_05208003.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str. Vollum]
gi|254761668|ref|ZP_05213686.1| pyridoxal biosynthesis lyase PdxS [Bacillus anthracis str.
Australia 94]
gi|46396354|sp|Q81W27|PDXS_BACAN RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|254781583|sp|C3P8Q3|PDXS_BACAA RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|254781584|sp|C3LIY7|PDXS_BACAC RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|30253525|gb|AAP24067.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 [Bacillus
anthracis str. Ames]
gi|47500414|gb|AAT29090.1| pyridoxine biosynthesis protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49176976|gb|AAT52352.1| pyridoxine biosynthesis protein [Bacillus anthracis str. Sterne]
gi|164711037|gb|EDR16603.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0488]
gi|167510286|gb|EDR85689.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0193]
gi|167529501|gb|EDR92251.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0442]
gi|170127498|gb|EDS96372.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0389]
gi|170667130|gb|EDT17891.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0465]
gi|172080023|gb|EDT65123.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0174]
gi|190559553|gb|EDV13546.1| pyridoxine biosynthesis protein [Bacillus anthracis Tsiankovskii-I]
gi|227005589|gb|ACP15332.1| pyridoxine biosynthesis protein [Bacillus anthracis str. CDC 684]
gi|229268694|gb|ACQ50331.1| pyridoxine biosynthesis protein [Bacillus anthracis str. A0248]
Length = 295
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPAKFARAI 252
>gi|197286610|ref|YP_002152482.1| thiazole biosynthesis [Proteus mirabilis HI4320]
gi|226703913|sp|B4EYU5|THIG_PROMH RecName: Full=Thiazole synthase
gi|194684097|emb|CAR45487.1| thiazole biosynthesis [Proteus mirabilis HI4320]
Length = 259
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 17/145 (11%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDTKYLLPDPIETLKAAELLVKEGFVVLPYCSADPVLCRRLEEVGCAAVMPLGSPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I + SI + VD G+ + ++ GAD ++V ++ K
Sbjct: 158 NQGLQTRDF-----LRIIIEQTSIPVVVDAGIGAPSHALEALELGADAVLVNTAIAVAKN 212
Query: 206 EISYAKRLND-------LKKSALAI 223
+ A+ ++S LA+
Sbjct: 213 PVLMAQAFKAAIDAGELARQSGLAV 237
>gi|110597437|ref|ZP_01385724.1| thiamine-phosphate pyrophosphorylase [Chlorobium ferrooxidans DSM
13031]
gi|110340981|gb|EAT59452.1| thiamine-phosphate pyrophosphorylase [Chlorobium ferrooxidans DSM
13031]
Length = 209
Score = 35.5 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 6/124 (4%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNP-GFGGQQ 149
H + R + + GV+ +P ++ D D I + P +
Sbjct: 80 VHLGQQDLPASAARKLLGNSRIIGVS--ASSPEEAIQAERDGADYIGFGHIYPTPSKEKG 137
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
+R+ ALI S+ + GG+T N ++ GA + V S+ +S
Sbjct: 138 FDPVGPESLRRVAALI---SLPIIAIGGITKSNASLVIGHGAAGIAVISAVSRADDPVSA 194
Query: 210 AKRL 213
+ L
Sbjct: 195 VQEL 198
>gi|218288571|ref|ZP_03492848.1| thiamine-phosphate pyrophosphorylase [Alicyclobacillus
acidocaldarius LAA1]
gi|218241228|gb|EED08403.1| thiamine-phosphate pyrophosphorylase [Alicyclobacillus
acidocaldarius LAA1]
Length = 209
Score = 35.5 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLND 215
+ A I + GG+T ++ AGA + VV S+ + + A +
Sbjct: 148 LETLAACRRAVRIPIVGIGGITVERASEVMAAGASGVAVV-SAIMSAPDPKAAATAFAE 205
>gi|89893887|ref|YP_517374.1| hypothetical protein DSY1141 [Desulfitobacterium hafniense Y51]
gi|89333335|dbj|BAE82930.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 285
Score = 35.5 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
GG+ N++ + G D +V +S F+ K + ++ L
Sbjct: 243 GGINEANVRDYAETGVDGIVT-TSLFSAK-PLDIGVKIEPL 281
>gi|33603382|ref|NP_890942.1| thiamine-phosphate pyrophosphorylase [Bordetella bronchiseptica
RB50]
gi|47606137|sp|Q7WF72|THIE_BORBR RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|33577506|emb|CAE34771.1| thiamine-phosphate pyrophosphorylase [Bordetella bronchiseptica
RB50]
Length = 217
Score = 35.5 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
+ GG+T N+ + QAGAD V S F
Sbjct: 168 VVAIGGITPANVSQVAQAGADSAAVISGLFEAPD 201
>gi|312141234|ref|YP_004008570.1| thiamine phosphate pyrophosphorylase, thie [Rhodococcus equi 103S]
gi|325673936|ref|ZP_08153626.1| thiamin-phosphate pyrophosphorylase [Rhodococcus equi ATCC 33707]
gi|311890573|emb|CBH49891.1| thiamine phosphate pyrophosphorylase, ThiE [Rhodococcus equi 103S]
gi|325555201|gb|EGD24873.1| thiamin-phosphate pyrophosphorylase [Rhodococcus equi ATCC 33707]
Length = 230
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV + +++AGA +VV + + A+ L+D
Sbjct: 186 IGGVDHERLPEILEAGATRIVVVRAITAADDPKAAARALSD 226
>gi|284161529|ref|YP_003400152.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Archaeoglobus profundus DSM 5631]
gi|284011526|gb|ADB57479.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Archaeoglobus profundus DSM 5631]
Length = 232
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 81/198 (40%), Gaps = 23/198 (11%)
Query: 22 EISNI-TKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI 80
E++ + K GA+ +H +DG F F DVI + +++
Sbjct: 32 EVAKMWIKKGARVLHVIDLDGAF-EGRLFHEDVILEIARIAETQAG---GGIRDLKIAER 87
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM----- 135
+ ++G + + F + +R + +A++ + ++E + + ++
Sbjct: 88 LLNSGVERVIFGTLAVRDVRSVKTFAKKYPNRVMIAVDSKKGKVVVEGWVRKTELTPIEV 147
Query: 136 --------ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSL 186
+ ++ N G + + KIR+ + S+ + V GG++ +++++
Sbjct: 148 AKLYEDCEVSLLYTNVDVEG-LVSGVELEKIREV---VESTSLPVYVAGGISSPDDVRAI 203
Query: 187 VQAGADLLVVGSSFFNQK 204
+ GA +++GS+ + K
Sbjct: 204 KKCGAVGVIIGSALYTGK 221
>gi|218670732|ref|ZP_03520403.1| thiamine-phosphate pyrophosphorylase protein [Rhizobium etli GR56]
Length = 211
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 53/142 (37%), Gaps = 7/142 (4%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+ G D + E RS R + G+++ E A ++ + + +
Sbjct: 73 VEAAIAIGADGLHIGQEDMD--ARSARGMIGPDMILGLSVETEALAAAVDPDLVDYTGVG 130
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ P + + + + + S+++ GG+ + ++ + AGA L V
Sbjct: 131 PVFATPTKADHK-QPIGLDGLARLAQVSPVPSVAI---GGLKAEHVAEVFAAGAKGLAVV 186
Query: 198 SSFFNQKGEISYAKRL-NDLKK 218
S+ + +R+ +++K
Sbjct: 187 SAICGTPDPAAATRRIAAEIRK 208
>gi|156936972|ref|YP_001434768.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Ignicoccus hospitalis
KIN4/I]
gi|156565956|gb|ABU81361.1| 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)
imidazole-4-carboxamide isomerase [Ignicoccus hospitalis
KIN4/I]
Length = 235
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 158 IRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQK 204
++ + + LE GGV + ++K L AGAD++V+G + ++ K
Sbjct: 183 VKYIRREYPDK--LLEYAGGVGSPEHVKLLESAGADVVVLGMALYSGK 228
>gi|118431129|ref|NP_147371.2| geranylgeranylglyceryl phosphate synthase-like protein [Aeropyrum
pernix K1]
gi|150421612|sp|Q9YEF5|GGGPS_AERPE RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|116062453|dbj|BAA79591.2| probable farnesylgeranylglyceryl phosphate synthase [Aeropyrum
pernix K1]
Length = 254
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGS 198
GGV T + L +AGAD+LV G+
Sbjct: 212 GGVRTPEAARMLAEAGADVLVTGT 235
>gi|21232698|ref|NP_638615.1| thiamine-phosphate pyrophosphorylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767227|ref|YP_241989.1| thiamine-phosphate pyrophosphorylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|47606188|sp|Q8P5R7|THIE_XANCP RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|81306790|sp|Q4UYA4|THIE_XANC8 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|21114508|gb|AAM42539.1| thiamin-phosphate pyrophosphorylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572559|gb|AAY47969.1| thiamin-phosphate pyrophosphorylase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 207
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+T + LV AGADL+ V S + ++ +
Sbjct: 163 IGGITPSQVPELVTAGADLIAVVSGVYAAADPVAAVQAYRA 203
>gi|297827099|ref|XP_002881432.1| BBMII isomerase [Arabidopsis lyrata subsp. lyrata]
gi|297327271|gb|EFH57691.1| BBMII isomerase [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
L+V GG+ S N S ++ GA ++V S FN G+I +RL DL
Sbjct: 127 LQVGGGINSENCLSYIEEGASHVIVTSYVFN-NGKID-LERLKDL 169
>gi|291522462|emb|CBK80755.1| inosine-5'-monophosphate dehydrogenase [Coprococcus catus GD/7]
Length = 484
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 18/134 (13%)
Query: 78 INIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
++ + A D+I T H S ++ R++ + V E +I+
Sbjct: 232 VDALVKAHVDVIVIDTAHG-HSANVLRTVHMVKDAYPDLQVIAGNVATAEATEALIEAGV 290
Query: 135 MILIMTVNPGFG---------GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIK 184
+ + + PG G I + + AK K +I + DGG+ ++
Sbjct: 291 DCVKVGIGPGSICTTRVVAGIGVPQISAVMDCYEAAK----KHNIPIIADGGIKYSGDVT 346
Query: 185 SLVQAGADLLVVGS 198
+ AGA++ ++GS
Sbjct: 347 KAIAAGANVCMMGS 360
>gi|262277810|ref|ZP_06055603.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [alpha proteobacterium HIMB114]
gi|262224913|gb|EEY75372.1| 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]imidazole-4-
carboxamide isomerase [alpha proteobacterium HIMB114]
Length = 238
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKG 205
++ K +I + ++V GG+ T ++ ++ G + V+G++ N
Sbjct: 63 LKTIKEIIQSTGLKVQVGGGLRTKDTVEEVIDLGVENAVMGTAAVNDPD 111
>gi|227355197|ref|ZP_03839606.1| thiazole biosynthesis protein [Proteus mirabilis ATCC 29906]
gi|227164706|gb|EEI49560.1| thiazole biosynthesis protein [Proteus mirabilis ATCC 29906]
Length = 259
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 17/145 (11%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDTKYLLPDPIETLKAAELLVKEGFVVLPYCSADPVLCRRLEEVGCAAVMPLGSPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I + SI + VD G+ + ++ GAD ++V ++ K
Sbjct: 158 NQGLQTRDF-----LRIIIEQTSIPVVVDAGIGAPSHALEALELGADAVLVNTAIAVAKN 212
Query: 206 EISYAKRLND-------LKKSALAI 223
+ A+ ++S LA+
Sbjct: 213 PVLMAQAFKAAIDAGELARQSGLAV 237
>gi|33591547|ref|NP_879191.1| thiamine-phosphate pyrophosphorylase [Bordetella pertussis Tohama
I]
gi|33598442|ref|NP_886085.1| thiamine-phosphate pyrophosphorylase [Bordetella parapertussis
12822]
gi|47606132|sp|Q7W049|THIE_BORPE RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|47606136|sp|Q7W3U2|THIE_BORPA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|33571189|emb|CAE40693.1| thiamine-phosphate pyrophosphorylase [Bordetella pertussis Tohama
I]
gi|33574571|emb|CAE39218.1| thiamine-phosphate pyrophosphorylase [Bordetella parapertussis]
gi|332380947|gb|AEE65794.1| thiamine-phosphate pyrophosphorylase [Bordetella pertussis CS]
Length = 217
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKG 205
+ GG+T N+ + QAGAD V S F
Sbjct: 168 VVAIGGITPANVSQVAQAGADSAAVISGLFEAPD 201
>gi|152974200|ref|YP_001373717.1| thiamine-phosphate pyrophosphorylase [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|189030308|sp|A7GKR4|THIE_BACCN RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|152022952|gb|ABS20722.1| thiamine-phosphate pyrophosphorylase [Bacillus cytotoxicus NVH
391-98]
Length = 217
Score = 35.5 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+I + GG+T N S+++AGAD + V S+
Sbjct: 167 NIPIVGIGGITIENASSVIEAGADGVSVISAI 198
>gi|330977403|gb|EGH77352.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 282
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLGELQQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ SLE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLDDMREAVRLTAGRA-SLEASGGINEDTLRVIAETGVDYI 262
>gi|227830848|ref|YP_002832628.1| geranylgeranylglyceryl phosphate synthase-like protein [Sulfolobus
islandicus L.S.2.15]
gi|229579734|ref|YP_002838133.1| geranylgeranylglyceryl phosphate synthase-like protein [Sulfolobus
islandicus Y.G.57.14]
gi|229581597|ref|YP_002839996.1| geranylgeranylglyceryl phosphate synthase-like protein [Sulfolobus
islandicus Y.N.15.51]
gi|229585370|ref|YP_002843872.1| geranylgeranylglyceryl phosphate synthase-like protein [Sulfolobus
islandicus M.16.27]
gi|284998355|ref|YP_003420123.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
L.D.8.5]
gi|259647498|sp|C3MZJ5|GGGPS_SULIA RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|259647500|sp|C3MRH0|GGGPS_SULIL RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|259647502|sp|C3NFV6|GGGPS_SULIN RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|259647503|sp|C3N7L7|GGGPS_SULIY RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|227457296|gb|ACP35983.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
L.S.2.15]
gi|228010449|gb|ACP46211.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
Y.G.57.14]
gi|228012313|gb|ACP48074.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
Y.N.15.51]
gi|228020420|gb|ACP55827.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
M.16.27]
gi|284446251|gb|ADB87753.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
L.D.8.5]
gi|323475194|gb|ADX85800.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
REY15A]
gi|323477926|gb|ADX83164.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
HVE10/4]
Length = 255
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ I I++A SI L + GG+ + LV+AGA+++V G+ ++
Sbjct: 192 PIRPEMISFIKKA------SSIPLIIGGGIRSVEVALKLVEAGANIIVTGNII--ERDVD 243
Query: 208 SYAKRLNDLKK 218
K + +K
Sbjct: 244 KAIKIIRGIKN 254
>gi|293601994|ref|ZP_06684450.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Achromobacter
piechaudii ATCC 43553]
gi|292819617|gb|EFF78642.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Achromobacter
piechaudii ATCC 43553]
Length = 217
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 21/134 (15%)
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK--KTGVAINPETPVAILED 128
+ + D + G I+ H ++ +R A+G GVA TP
Sbjct: 73 VLNPDDCARVQDAGGELIVMPHSDA-----AVIRAAKALGMASCPGVA----TPTEAFAA 123
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ D +L M F +QL + + R + I+L GG+T NI Q
Sbjct: 124 LAAGAD-VLKM-----FPAEQLGPAVLKAWRAV----MRPPIALVPVGGITPDNISVFAQ 173
Query: 189 AGADLLVVGSSFFN 202
AGA +GS+ +
Sbjct: 174 AGASGFGLGSALYK 187
>gi|253568520|ref|ZP_04845931.1| thiamine-phosphate pyrophosphorylase [Bacteroides sp. 1_1_6]
gi|298385425|ref|ZP_06994983.1| thiamine-phosphate diphosphorylase [Bacteroides sp. 1_1_14]
gi|251842593|gb|EES70673.1| thiamine-phosphate pyrophosphorylase [Bacteroides sp. 1_1_6]
gi|298261566|gb|EFI04432.1| thiamine-phosphate diphosphorylase [Bacteroides sp. 1_1_14]
Length = 209
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 159 RQAKALIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ + + +I L V GG+T +I ++++ G + + + + + + +++ ++
Sbjct: 145 AAILSQMKEANIELPVVAIGGITCEDIPAILETGVNGIALSGTILRAEDPAAETRKILNM 204
Query: 217 K 217
K
Sbjct: 205 K 205
>gi|255575707|ref|XP_002528753.1| conserved hypothetical protein [Ricinus communis]
gi|223531847|gb|EEF33665.1| conserved hypothetical protein [Ricinus communis]
Length = 272
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ K +AL L+V GG+ N S V+ GA ++V S FN G++ +RL
Sbjct: 114 LSKAAAFEALHAYPGG-LQVGGGINVDNCLSYVEEGASHVIVTSYVFN-NGQMD-LERLK 170
Query: 215 DL 216
DL
Sbjct: 171 DL 172
>gi|50313441|gb|AAT74592.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
isomerase [Alyssum lesbiacum]
Length = 131
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
L+V GG+ S N S ++ GA ++V S FN G++ +RL DL K
Sbjct: 39 LQVGGGINSENCLSYIEEGASHVIVTSYVFN-NGKLD-LERLKDLVK 83
>gi|15897153|ref|NP_341758.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-2)
[Sulfolobus solfataricus P2]
gi|284174398|ref|ZP_06388367.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-2)
[Sulfolobus solfataricus 98/2]
gi|13813340|gb|AAK40548.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-2)
[Sulfolobus solfataricus P2]
gi|261601819|gb|ACX91422.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus solfataricus 98/2]
Length = 225
Score = 35.5 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 36/83 (43%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ + G Q+ ++ ++ + + ++ + + GG+ I L+ + V
Sbjct: 141 VDIIGFHVGLDVQKSRGISVADLKNEIRKVSELNLIISIAGGLNKDRILELIDLPVSIYV 200
Query: 196 VGSSFFNQKGEISYAKRLNDLKK 218
VG + K + +K + ++ K
Sbjct: 201 VGGAITRSKEPKNVSKEIVNILK 223
>gi|317061520|ref|ZP_07926005.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D12]
gi|313687196|gb|EFS24031.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D12]
Length = 487
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 18/133 (13%)
Query: 78 INIIADAGCDIITF-----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + +AG DIIT H E + +R I A + + +D+I+
Sbjct: 235 VKALVEAGVDIITVDSAHGHSE---GVIEMVRQIRAAFPELDLIGGNIVTAEAAKDLIEA 291
Query: 133 IDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIK 184
+ + + PG G + + + + I + DGG+ +I
Sbjct: 292 GVNAVKVGIGPGSICTTRVVAGVGV--PQLTAVNDVYEYCKDKGIGVIADGGIKLSGDIV 349
Query: 185 SLVQAGADLLVVG 197
+ AGAD +++G
Sbjct: 350 KALAAGADCVMLG 362
>gi|255523277|ref|ZP_05390247.1| thiamine-phosphate pyrophosphorylase [Clostridium carboxidivorans
P7]
gi|296188212|ref|ZP_06856604.1| thiamine-phosphate pyrophosphorylase [Clostridium carboxidivorans
P7]
gi|255512931|gb|EET89201.1| thiamine-phosphate pyrophosphorylase [Clostridium carboxidivorans
P7]
gi|296047338|gb|EFG86780.1| thiamine-phosphate pyrophosphorylase [Clostridium carboxidivorans
P7]
Length = 204
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 6/126 (4%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV-NPGFGGQQ 149
H S + R I K G++ +E D D + I TV G
Sbjct: 83 VHLGQSDMPIKFARKILGKEKIIGIS--AGNVKEAVEAERDGADYLGIGTVFYTGTKKDI 140
Query: 150 LIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISY 209
I +++ + S+++ GGV N K ++ G + + V S+ +
Sbjct: 141 KTPIGIEGLKEVCNSVKIPSVAI---GGVNETNFKEVLSTGVNGISVISAILGKDDIRQA 197
Query: 210 AKRLND 215
+K LN
Sbjct: 198 SKNLNS 203
>gi|229074075|ref|ZP_04207124.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock4-18]
gi|229094735|ref|ZP_04225743.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock3-29]
gi|229100801|ref|ZP_04231619.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock3-28]
gi|229113689|ref|ZP_04243126.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock1-3]
gi|228669755|gb|EEL25160.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock1-3]
gi|228682608|gb|EEL36667.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock3-28]
gi|228688673|gb|EEL42543.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock3-29]
gi|228709038|gb|EEL61162.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock4-18]
Length = 295
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|329121480|ref|ZP_08250104.1| pyridoxine biosynthesis protein [Dialister micraerophilus DSM
19965]
gi|327469395|gb|EGF14865.1| pyridoxine biosynthesis protein [Dialister micraerophilus DSM
19965]
Length = 281
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +V+ GAD + VGS F AK +
Sbjct: 204 GGVATPADAALMVELGADGVFVGSGIFKSGDPEKRAKAI 242
>gi|284165172|ref|YP_003403451.1| tRNA-dihydrouridine synthase-like protein [Haloterrigena turkmenica
DSM 5511]
gi|284014827|gb|ADB60778.1| tRNA-dihydrouridine synthase-like protein [Haloterrigena turkmenica
DSM 5511]
Length = 250
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 10/74 (13%)
Query: 18 RLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSH 77
L + I AGA +H D MD ++R + + +D + + D+
Sbjct: 158 DLPALAAAIETAGADYLHVDAMD---------SESIVREIAAATDLFVVANNGVRD-DAT 207
Query: 78 INIIADAGCDIITF 91
+ D G D ++
Sbjct: 208 VREYVDYGADAVSV 221
>gi|257463998|ref|ZP_05628383.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D12]
Length = 486
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 18/133 (13%)
Query: 78 INIIADAGCDIITF-----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDE 132
+ + +AG DIIT H E + +R I A + + +D+I+
Sbjct: 234 VKALVEAGVDIITVDSAHGHSE---GVIEMVRQIRAAFPELDLIGGNIVTAEAAKDLIEA 290
Query: 133 IDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIK 184
+ + + PG G + + + + I + DGG+ +I
Sbjct: 291 GVNAVKVGIGPGSICTTRVVAGVGV--PQLTAVNDVYEYCKDKGIGVIADGGIKLSGDIV 348
Query: 185 SLVQAGADLLVVG 197
+ AGAD +++G
Sbjct: 349 KALAAGADCVMLG 361
>gi|227828141|ref|YP_002829921.1| geranylgeranylglyceryl phosphate synthase-like protein [Sulfolobus
islandicus M.14.25]
gi|238620331|ref|YP_002915157.1| geranylgeranylglyceryl phosphate synthase-like protein [Sulfolobus
islandicus M.16.4]
gi|259647499|sp|C4KIS5|GGGPS_SULIK RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|259647501|sp|C3MY66|GGGPS_SULIM RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|227459937|gb|ACP38623.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
M.14.25]
gi|238381401|gb|ACR42489.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus islandicus
M.16.4]
Length = 255
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ I I++A SI L + GG+ + LV+AGA+++V G+ ++
Sbjct: 192 PIRPEMISFIKKA------SSIPLIIGGGIRSVEVALKLVEAGANIIVTGNII--ERDVD 243
Query: 208 SYAKRLNDLKK 218
K + +K
Sbjct: 244 KAIKIIRGIKN 254
>gi|154501514|ref|ZP_02039215.1| hypothetical protein BACCAP_04867 [Bacteroides capillosus ATCC
29799]
gi|150269802|gb|EDM97342.1| hypothetical protein BACCAP_04867 [Bacteroides capillosus ATCC
29799]
Length = 491
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 14/140 (10%)
Query: 70 MISSIDSHINIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL 126
+ S + + + +AG D++ H S +I ++ I A+ +
Sbjct: 230 VTSDVLDRVAALVEAGADVLCLDSAHG-HSHNIIECVKRIKALYPDVQLIAGNVATAEGT 288
Query: 127 EDVIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
+I+ + + + PG G + I + A + K I + DGGV
Sbjct: 289 RALIEAGADCVKIGIGPGSICTTRVVAGIGV--PQITAVYDAACVADKYGIPIIADGGVK 346
Query: 180 SR-NIKSLVQAGADLLVVGS 198
+I + AGA+++++GS
Sbjct: 347 YSGDIAKAIAAGANVVMLGS 366
>gi|149202468|ref|ZP_01879440.1| glutamate synthase family protein [Roseovarius sp. TM1035]
gi|149143750|gb|EDM31784.1| glutamate synthase family protein [Roseovarius sp. TM1035]
Length = 447
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKG 205
GQ ++ +R + L R + L V GG+ T ++ + GAD + +G++ G
Sbjct: 276 GQPILACIREAVRALQDLGMHREVQLIVSGGIRTGADVAKCMALGADAVAIGTAALIALG 335
Query: 206 EISYAK--RLNDLKKSALAID 224
+ N L +A A D
Sbjct: 336 DNDPKWESEYNKLGTTAGAYD 356
>gi|53803026|ref|YP_115198.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Methylococcus
capsulatus str. Bath]
gi|60392352|sp|Q603K2|HIS4_METCA RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|53756787|gb|AAU91078.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Methylococcus capsulatus str. Bath]
Length = 243
Score = 35.5 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ ++ F G+ TI IR+A + ++V GG+ I+ + AG D +
Sbjct: 47 LHLVDLDGAFAGKPRNAETIHAIREAC-----PDVEIQVGGGIRDEETIQGYLNAGVDFV 101
Query: 195 VVGS 198
++G+
Sbjct: 102 IIGT 105
>gi|311071005|ref|YP_003975928.1| 3-hexulose-6-phosphate synthase [Bacillus atrophaeus 1942]
gi|310871522|gb|ADP34997.1| 3-hexulose-6-phosphate synthase [Bacillus atrophaeus 1942]
Length = 210
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 78 INIIADAGCDIITFHPESSPH--IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
I ++AG DIIT ++ I+ ++ KK V + + ID +
Sbjct: 70 IMKASEAGADIITV-LGATDDATIKGAVEEAKKQQKKILVDMINVKDIETRAKEIDALG- 127
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ + V+ G+ Q +++ ++ K + ++ GG+ + +++ DL++
Sbjct: 128 VDYICVHTGYDLQAEGKNSFEELTTIKHAVQNAKTAIA--GGIKLETLPEVIKQKPDLVI 185
Query: 196 VGSSFFNQKGEISYAKRLNDL 216
VG + + S A ++ L
Sbjct: 186 VGGGITGAENKASAASKMKQL 206
>gi|295674653|ref|XP_002797872.1| 5-proFAR isomerase [Paracoccidioides brasiliensis Pb01]
gi|226280522|gb|EEH36088.1| 5-proFAR isomerase [Paracoccidioides brasiliensis Pb01]
Length = 258
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
L+V GG+T +N + + AGA+ +++ S F
Sbjct: 79 LQVAGGITDKNAQHWIAAGAEKVIITSYLF 108
>gi|239917320|ref|YP_002956878.1| thiamine-phosphate diphosphorylase [Micrococcus luteus NCTC 2665]
gi|281414200|ref|ZP_06245942.1| thiamine-phosphate diphosphorylase [Micrococcus luteus NCTC 2665]
gi|239838527|gb|ACS30324.1| thiamine-phosphate diphosphorylase [Micrococcus luteus NCTC 2665]
Length = 247
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV + + + AGA+ +VV + + + A+ L
Sbjct: 203 IGGVDADRLPEVRAAGAERIVVVRAVTQAEDPEAAARSLRA 243
>gi|30018288|ref|NP_829919.1| pyridoxine biosynthesis protein [Bacillus cereus ATCC 14579]
gi|29893828|gb|AAP07120.1| pyridoxine biosynthesis protein [Bacillus cereus ATCC 14579]
Length = 297
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 216 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 254
>gi|313891332|ref|ZP_07824948.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 [Dialister
microaerophilus UPII 345-E]
gi|313120107|gb|EFR43283.1| pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 [Dialister
microaerophilus UPII 345-E]
Length = 281
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +V+ GAD + VGS F AK +
Sbjct: 204 GGVATPADAALMVELGADGVFVGSGIFKSGDPKKRAKAI 242
>gi|229077287|ref|ZP_04209970.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock4-2]
gi|228706010|gb|EEL58315.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock4-2]
Length = 295
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|227828193|ref|YP_002829973.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
M.14.25]
gi|229585422|ref|YP_002843924.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
M.16.27]
gi|238620384|ref|YP_002915210.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus M.16.4]
gi|227459989|gb|ACP38675.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
M.14.25]
gi|228020472|gb|ACP55879.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
M.16.27]
gi|238381454|gb|ACR42542.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus M.16.4]
Length = 225
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 35/83 (42%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ + G Q+ ++ ++ + + + + + GG+ I L+ + V
Sbjct: 141 VDIIGFHVGLDVQKSRGISVADLKSEIRKVSELDLLISIAGGLNKDRILELIDLPVSIYV 200
Query: 196 VGSSFFNQKGEISYAKRLNDLKK 218
VG + K + +K + ++ K
Sbjct: 201 VGGAITRSKEPKNVSKEIVNILK 223
>gi|206972671|ref|ZP_03233611.1| pyridoxine biosynthesis protein [Bacillus cereus AH1134]
gi|218233181|ref|YP_002364865.1| pyridoxal biosynthesis lyase PdxS [Bacillus cereus B4264]
gi|228918965|ref|ZP_04082346.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228950562|ref|ZP_04112698.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228956455|ref|ZP_04118253.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229039919|ref|ZP_04189685.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH676]
gi|229067778|ref|ZP_04201097.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus F65185]
gi|229125531|ref|ZP_04254565.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BDRD-Cer4]
gi|229142820|ref|ZP_04271264.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BDRD-ST24]
gi|229148423|ref|ZP_04276681.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus m1550]
gi|229176614|ref|ZP_04304021.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus 172560W]
gi|296500848|ref|YP_003662548.1| pyridoxine biosynthesis protein [Bacillus thuringiensis BMB171]
gi|46396351|sp|Q81JC6|PDXS_BACCR RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|254781588|sp|B7HII3|PDXS_BACC4 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|206732391|gb|EDZ49573.1| pyridoxine biosynthesis protein [Bacillus cereus AH1134]
gi|218161138|gb|ACK61130.1| pyridoxine biosynthesis protein [Bacillus cereus B4264]
gi|228606861|gb|EEK64275.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus 172560W]
gi|228635032|gb|EEK91603.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus m1550]
gi|228640634|gb|EEK97020.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BDRD-ST24]
gi|228657915|gb|EEL13719.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BDRD-Cer4]
gi|228715331|gb|EEL67188.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus F65185]
gi|228727409|gb|EEL78600.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH676]
gi|228803212|gb|EEM50032.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228809105|gb|EEM55588.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228840680|gb|EEM85940.1| Pyridoxal biosynthesis lyase pdxS [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296321900|gb|ADH04828.1| pyridoxine biosynthesis protein [Bacillus thuringiensis BMB171]
Length = 295
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|75764315|ref|ZP_00743848.1| short chain dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218897530|ref|YP_002445941.1| short chain dehydrogenase [Bacillus cereus G9842]
gi|228901129|ref|ZP_04065332.1| Short chain dehydrogenase [Bacillus thuringiensis IBL 4222]
gi|228969864|ref|ZP_04130597.1| Short chain dehydrogenase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|74488195|gb|EAO51878.1| short chain dehydrogenase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218541977|gb|ACK94371.1| short chain dehydrogenase [Bacillus cereus G9842]
gi|228789850|gb|EEM37699.1| Short chain dehydrogenase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228858484|gb|EEN02941.1| Short chain dehydrogenase [Bacillus thuringiensis IBL 4222]
Length = 238
Score = 35.5 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Query: 171 SLEVDGG---VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + GG + K +++ GA +++ G + ++ AK+L
Sbjct: 10 RIVIIGGSSGIGLATAKQVIEQGAHVIIAG----RSEEKLKVAKKL 51
>gi|304438713|ref|ZP_07398651.1| thiamine-phosphate diphosphorylase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368362|gb|EFM22049.1| thiamine-phosphate diphosphorylase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 219
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRL 213
K + ++ + GG+ N+ L +G A + V+ S+ F ++ A+RL
Sbjct: 157 LKEICSATAVPVVAIGGINDENVMQLAGSGIAGVAVI-SAIFAKEDIRLAAQRL 209
>gi|304314808|ref|YP_003849955.1| pyridoxal 5'-phosphate synthase subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302588267|gb|ADL58642.1| predicted pyridoxal 5'-phosphate synthase subunit
[Methanothermobacter marburgensis str. Marburg]
Length = 293
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F YA+ +
Sbjct: 212 GGVATPADAALMMQLGADGVFVGSGIFKSDNPEGYARAI 250
>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola sp. JR]
gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
Length = 487
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 4/80 (5%)
Query: 42 CFVPNIS-FGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIR 100
+V N + +I R + L I + A G T HP S H+
Sbjct: 63 TYVQNFTDIDDKIINRAREENTDPIT--LAAKYIREYFKDAAALGVREATVHPRVSEHLD 120
Query: 101 RSLRTIHAMGKKTGVAINPE 120
+ I + K G A +
Sbjct: 121 EIIEMIRGI-MKNGYAYQLD 139
>gi|229083327|ref|ZP_04215687.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock3-44]
gi|228699974|gb|EEL52599.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus Rock3-44]
Length = 295
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|254424428|ref|ZP_05038146.1| thiazole biosynthesis protein ThiG, putative [Synechococcus sp. PCC
7335]
gi|196191917|gb|EDX86881.1| thiazole biosynthesis protein ThiG, putative [Synechococcus sp. PCC
7335]
Length = 659
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 114 GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG-GQQLIESTIPKIRQAKALIGKRSIS 171
G A+ P L ++++ +M + G GQ + + +I +I ++
Sbjct: 528 GFAVLPYINADPLLAKRLEDVGCATVMPLGSPIGSGQGIKNAANIQI-----IIENATVP 582
Query: 172 LEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ VD G+ T ++ GAD L+V S+ K ++ + +
Sbjct: 583 VVVDAGIGTPSEAAHAMELGADALLVNSAIALAKDPVAMGRAM 625
>gi|53713820|ref|YP_099812.1| thiamine-phosphate pyrophosphorylase [Bacteroides fragilis YCH46]
gi|265764165|ref|ZP_06092733.1| thiamine-phosphate pyrophosphorylase [Bacteroides sp. 2_1_16]
gi|81824994|sp|Q64TA1|THIE_BACFR RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|52216685|dbj|BAD49278.1| putative thiamine-phosphate pyrophosphorylase [Bacteroides fragilis
YCH46]
gi|263256773|gb|EEZ28119.1| thiamine-phosphate pyrophosphorylase [Bacteroides sp. 2_1_16]
Length = 204
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 163 ALIGKRSISLEV--DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
A + + I + V GG+ + +I ++++ G + + + + + KR+ ++
Sbjct: 149 AQMNEADIRIPVVAIGGIVAEDIPAIMETGVNGIALSGAILQAPDPVEETKRILNI 204
>gi|271967080|ref|YP_003341276.1| transcriptional regulator [Streptosporangium roseum DSM 43021]
gi|270510255|gb|ACZ88533.1| transcriptional regulator [Streptosporangium roseum DSM 43021]
Length = 273
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 16/57 (28%)
Query: 179 TSRNIKSLVQAGADLLV------------VGSSFFNQKGEISYAKRLNDLKKSALAI 223
+++ +AGAD+LV G++ +R+ ++ +A+A+
Sbjct: 162 DEEQARAMAEAGADVLVPHVGLTTKGSIGAGTAL----TLDEAVERVQAMRDAAVAV 214
>gi|260902292|ref|ZP_05910687.1| thiamine-phosphate diphosphorylase [Vibrio parahaemolyticus AQ4037]
gi|308110549|gb|EFO48089.1| thiamine-phosphate diphosphorylase [Vibrio parahaemolyticus AQ4037]
Length = 204
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 23/59 (38%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
I K + + + GG+ NI +L G L + S+ + + A+ L L
Sbjct: 144 IEGLKMALNTTPLPIVAIGGINETNIPALSATGVHGLALVSAICHAENPTKAAEYLLSL 202
>gi|253579785|ref|ZP_04857053.1| thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase
[Ruminococcus sp. 5_1_39B_FAA]
gi|251848784|gb|EES76746.1| thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase
[Ruminococcus sp. 5_1_39BFAA]
Length = 212
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLND 215
KA+ SI + GG+T+ NI L G + V+ S+ + Q A+ L +
Sbjct: 151 LKAICEAVSIPVVAIGGITAENISQLKGTGICGVAVI-SAIYAQNNIKEAAEELKE 205
>gi|229188299|ref|ZP_04315350.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus ATCC 10876]
gi|228595167|gb|EEK52935.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus ATCC 10876]
Length = 295
Score = 35.1 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|330967504|gb|EGH67764.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]
imidazole-4-carboxamide isomerase [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 245
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F GQ + + I + ++ +++ GG+ + I+ ++AG +
Sbjct: 47 LHLVDLNGAFEGQPVNGDVVTAIAK-----RYPNLPIQIGGGIRSLETIEHYIKAGVSYV 101
Query: 195 VVGSSFFNQKGEISYA 210
++G+ + ++ A
Sbjct: 102 IIGTKAVKEPDFVAQA 117
>gi|328851826|gb|EGG00977.1| hypothetical protein MELLADRAFT_39424 [Melampsora larici-populina
98AG31]
Length = 296
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
R+ K +EV GG+T NI + D+ SS I ++ ++
Sbjct: 237 RKLKEKYQNHQFLIEVSGGITEENISEHLCDDVDIY-STSSVHQGTPTIDFSLKI 290
>gi|296242334|ref|YP_003649821.1| dihydropteroate synthase-like protein [Thermosphaera aggregans DSM
11486]
gi|296094918|gb|ADG90869.1| dihydropteroate synthase-related protein [Thermosphaera aggregans
DSM 11486]
Length = 499
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 183 IKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+ LV GAD+LV+GSS + Y++++ L K + +D
Sbjct: 165 ARRLVSHGADILVIGSSRLPFDTVVEYSRKIKQLVKKPVGVD 206
>gi|284162099|ref|YP_003400722.1| geranylgeranylglyceryl phosphate synthase [Archaeoglobus profundus
DSM 5631]
gi|284012096|gb|ADB58049.1| geranylgeranylglyceryl phosphate synthase [Archaeoglobus profundus
DSM 5631]
Length = 262
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR- 212
+ +R+ I SI V GGV + +++ GAD + VG++ F + K
Sbjct: 188 LEMVREVANSI---SIPYVVAGGVRRPEEAEKIIECGADAVQVGTA-FEIDNAVERVKSF 243
Query: 213 LNDLKKSA 220
+ +++ A
Sbjct: 244 VKAVREGA 251
>gi|255025187|ref|ZP_05297173.1| thiamine-phosphate pyrophosphorylase [Listeria monocytogenes FSL
J2-003]
Length = 232
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+I + GG+ N ++ AGAD + V S+ S K+L
Sbjct: 163 TIPIVGIGGINETNSAEVLTAGADGVSVISAITQSDDCHSVIKQLK 208
>gi|228958807|ref|ZP_04120517.1| Short chain dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228800879|gb|EEM47786.1| Short chain dehydrogenase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 238
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 168 RSISLEVDGG---VTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++ + + GG + K ++ GA +++ G K ++ AK+L
Sbjct: 7 KNSRIVIIGGSSGIGFATAKQAIEQGAHVIIAG----RSKEKLKIAKKL 51
>gi|289668032|ref|ZP_06489107.1| thiamine-phosphate pyrophosphorylase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 207
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ + +LV AGADL+ V S + ++ +
Sbjct: 148 ALLQRAAELHLPRVAIGGIAPAQVPALVTAGADLIAVVSGVYAAPDPVAAVQAYRA 203
>gi|289662133|ref|ZP_06483714.1| thiamine-phosphate pyrophosphorylase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 207
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+ + +LV AGADL+ V S + ++ +
Sbjct: 148 ALLQRAAELHLPRVAIGGIAPAQVPALVTAGADLIAVVSGVYAAPDPVAAVQAYRA 203
>gi|229015416|ref|ZP_04172420.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH1273]
gi|229021622|ref|ZP_04178210.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH1272]
gi|228739668|gb|EEL90076.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH1272]
gi|228745874|gb|EEL95872.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH1273]
Length = 295
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|227504228|ref|ZP_03934277.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Corynebacterium striatum ATCC 6940]
gi|227199183|gb|EEI79231.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Corynebacterium striatum ATCC 6940]
Length = 280
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
VN G L ++ +R A LI R +++E G V + + G D++ VG
Sbjct: 209 VNAGVDTILLDNFSLEDLRAAVELIAGR-VTVEASGNVNLETVAEIAATGVDVISVG 264
>gi|159028331|emb|CAO87229.1| thiE [Microcystis aeruginosa PCC 7806]
Length = 338
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 26/97 (26%)
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST 154
S+ + + + I GV TP + +
Sbjct: 241 STTNPQEMAKAIQEKADYVGVGPVYATPTKAGK-----------------------TPAG 277
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+ +R A+ ++ GG+ S NIK +++AGA
Sbjct: 278 LEYVRYARENCPLPWFAI---GGIDSSNIKEVLEAGA 311
>gi|126652929|ref|ZP_01725071.1| pyridoxine biosynthesis protein [Bacillus sp. B14905]
gi|126590259|gb|EAZ84381.1| pyridoxine biosynthesis protein [Bacillus sp. B14905]
Length = 294
Score = 35.1 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 7/141 (4%)
Query: 79 NIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETP--VAILEDVID---EI 133
D + + R I P T V + + ++
Sbjct: 112 EEYHLLKSDYTVPFVCGCRDLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHIRKVNAQV 171
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
++ MT + +L+ + +R+ K L ++ GGV T + +++ GAD
Sbjct: 172 RKVVGMTEDELMTEAKLLGAPFELLREIKRLGCLPVVNFAA-GGVATPADAALMMELGAD 230
Query: 193 LLVVGSSFFNQKGEISYAKRL 213
+ VGS F +A +
Sbjct: 231 GVFVGSGIFKSDNPEKFAHAI 251
>gi|326790668|ref|YP_004308489.1| enzyme with TIM-barrel fold [Clostridium lentocellum DSM 5427]
gi|326541432|gb|ADZ83291.1| enzyme with TIM-barrel fold [Clostridium lentocellum DSM 5427]
Length = 222
Score = 35.1 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPG--------FGGQQLIESTIPK-----IRQ 160
GV +N P + V ID+ +I+TV G +I + K ++
Sbjct: 109 GVVLNAPAPHETITHVKQHIDIPVIVTVVSRDADIAGKIAAGADIINVSGGKQTAEIVKV 168
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+A + + + GG T ++ V+AGA+ +
Sbjct: 169 IRAQYPE--LPIIATGGPTEETVRETVEAGANCI 200
>gi|261417293|ref|YP_003250976.1| thiamine-phosphate pyrophosphorylase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261373749|gb|ACX76494.1| thiamine-phosphate pyrophosphorylase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302326854|gb|ADL26055.1| thiamine-phosphate diphosphorylase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 210
Score = 35.1 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 5/125 (4%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H + + R + K G T LE D + + + P
Sbjct: 84 VHVGQTDMPVKIARQLMGADKIIGATTK--TVPQALEAYEQGADYLGVGAIYP---TTTK 138
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+ + + + KA++ I++ GG+ NI L +G + S+
Sbjct: 139 VVTILTSVDTLKAIVKAVPINVNAIGGLNKDNIDVLKGSGISGICAVSAIMKAADPEKAT 198
Query: 211 KRLND 215
+ L D
Sbjct: 199 RELKD 203
>gi|222055476|ref|YP_002537838.1| nicotinate-nucleotide pyrophosphorylase [Geobacter sp. FRC-32]
gi|221564765|gb|ACM20737.1| nicotinate-nucleotide pyrophosphorylase [Geobacter sp. FRC-32]
Length = 276
Score = 35.1 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+R+A A+IG R+++ E GGV ++ + + G D++ VG
Sbjct: 220 MREAVAMIGGRALT-EASGGVNLSTVRQIAETGVDIISVG 258
>gi|15678693|ref|NP_275808.1| pyridoxal biosynthesis lyase PdxS [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3123062|sp|O26762|PDXS_METTH RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|2621749|gb|AAB85171.1| ethylene-inducible protein [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 293
Score = 35.1 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F YA+ +
Sbjct: 212 GGVATPADAALMMQLGADGVFVGSGIFKSDNPEGYARAI 250
>gi|281603376|gb|ADA76360.1| Thiazole biosynthesis protein ThiG [Shigella flexneri 2002017]
Length = 342
Score = 35.1 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 10/129 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 184 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 243
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 244 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHATQALEMGADAVLVNTAIAVADD 298
Query: 206 EISYAKRLN 214
++ AK
Sbjct: 299 PVNMAKAFR 307
>gi|227830952|ref|YP_002832732.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
L.S.2.15]
gi|229579830|ref|YP_002838229.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
Y.G.57.14]
gi|284998440|ref|YP_003420208.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
L.D.8.5]
gi|227457400|gb|ACP36087.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
L.S.2.15]
gi|228010545|gb|ACP46307.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
Y.G.57.14]
gi|284446336|gb|ADB87838.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
L.D.8.5]
Length = 225
Score = 35.1 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 35/83 (42%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ + G Q+ ++ ++ + + + + + GG+ I L+ + V
Sbjct: 141 VDIIGFHVGLDVQKSRGISVADLKSEIRKVSELDLLISIAGGLNKDRILELIDLPVSIYV 200
Query: 196 VGSSFFNQKGEISYAKRLNDLKK 218
VG + K + +K + ++ K
Sbjct: 201 VGGAITRSKEPKNVSKEIVNILK 223
>gi|254168249|ref|ZP_04875095.1| thiamine-phosphate pyrophosphorylase [Aciduliprofundum boonei T469]
gi|197622758|gb|EDY35327.1| thiamine-phosphate pyrophosphorylase [Aciduliprofundum boonei T469]
Length = 205
Score = 35.1 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 24/56 (42%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ + ++ I + GGV N+++++ G D + V S + +R+
Sbjct: 143 LENLRRIVESVRIPVVAIGGVNIENVRNVLSTGVDGIAVISFILAAENPKEATRRM 198
>gi|323701920|ref|ZP_08113590.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum
nigrificans DSM 574]
gi|323533224|gb|EGB23093.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum
nigrificans DSM 574]
Length = 484
Score = 35.1 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 10/130 (7%)
Query: 78 INIIADAGCDIITFHPESSPH---IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + A DII + H + ++R I + + +D+I
Sbjct: 234 VEALVKAKVDIIVV-DTAHGHSRLVIETVRNIRSAYPNLNIIAGNVATAEATKDLIAAGA 292
Query: 135 MILIMTVNPG--FGGQQLIESTIPKIRQAKALIGK---RSISLEVDGGVTSR-NIKSLVQ 188
+ + + PG + + +P+I + I + DGG+ +I +
Sbjct: 293 DAIKVGIGPGSICTTRVVAGVGVPQITAVYDCYQEALKHDIPIIADGGIKYSGDIVKALA 352
Query: 189 AGADLLVVGS 198
AGA+++++GS
Sbjct: 353 AGANVVMLGS 362
>gi|300115570|ref|YP_003762145.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Nitrosococcus watsonii C-113]
gi|299541507|gb|ADJ29824.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Nitrosococcus watsonii C-113]
Length = 246
Score = 35.1 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
+ PVA+ + + ++ ++ F GQ + I I QA + ++V GG+
Sbjct: 30 DDPVAVALHWAEAGAKRLHLVDLDGAFAGQPVNADIIYHIAQAL-----PDMDIQVGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
I++ + AG ++G+
Sbjct: 85 RDGDTIQTYLDAGVRYAIIGT 105
>gi|311113589|ref|YP_003984811.1| dihydroorotate oxidase [Rothia dentocariosa ATCC 17931]
gi|310945083|gb|ADP41377.1| dihydroorotate oxidase [Rothia dentocariosa ATCC 17931]
Length = 363
Score = 35.1 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 14/150 (9%)
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
H+ + D++ I R + +A N L +
Sbjct: 221 PHRHVPLTVKIAPDLV------DEDITAVARLAQELKLDGIIATNTTIAREGLG--LHTT 272
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ G G+ L ++ + K IG + + V GGV +++++ + AGAD
Sbjct: 273 KEKINAIGAGGLSGEPLKTRSLEVLHLLKKEIGNKLALISV-GGVTNAQDVQERLDAGAD 331
Query: 193 LLVVGSSFFNQKGEISYA---KRLNDLKKS 219
LV G + F +G + A + L +++S
Sbjct: 332 -LVQGYTAFLYEGPLWAAHINRGLYKIRRS 360
>gi|282555103|gb|ADA82638.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [endosymbiont of Camponotus pudorosus]
Length = 225
Score = 35.1 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 118 NPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI---GKRSISLEV 174
N P+ IL+ I + I+ + G + + T+ I + I + +++
Sbjct: 26 NYGNPIHILQKYIQQGAEIIHLVDLSGAKNPKNRQITL--INELIQTIMISNNTKLKIQI 83
Query: 175 DGGV-TSRNIKSLVQAGADLLVVGS 198
GG+ ++ +I++L++ GA+ +V+GS
Sbjct: 84 GGGIRSAVDIENLLKLGANRIVLGS 108
>gi|163938023|ref|YP_001642907.1| pyridoxine biosynthesis protein [Bacillus weihenstephanensis KBAB4]
gi|229009525|ref|ZP_04166754.1| Pyridoxal biosynthesis lyase pdxS [Bacillus mycoides DSM 2048]
gi|229053861|ref|ZP_04195298.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH603]
gi|229131022|ref|ZP_04259938.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BDRD-ST196]
gi|229165004|ref|ZP_04292802.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH621]
gi|254781591|sp|A9VM99|PDXS_BACWK RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|163860220|gb|ABY41279.1| pyridoxine biosynthesis protein [Bacillus weihenstephanensis KBAB4]
gi|228618456|gb|EEK75483.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH621]
gi|228652434|gb|EEL08355.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus BDRD-ST196]
gi|228721471|gb|EEL72988.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH603]
gi|228751736|gb|EEM01533.1| Pyridoxal biosynthesis lyase pdxS [Bacillus mycoides DSM 2048]
Length = 295
Score = 35.1 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|152993531|ref|YP_001359252.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Sulfurovum sp.
NBC37-1]
gi|167012113|sp|A6QBN6|HIS4_SULNB RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|151425392|dbj|BAF72895.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
[Sulfurovum sp. NBC37-1]
Length = 237
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ + ++ +N F G+ I KIR+ ++ LE+ GG+ IK + G D
Sbjct: 45 EWVHLVDLNGAFAGKPENLEQIKKIRE------NCNLKLELGGGIRDEETIKMYLDLGID 98
Query: 193 LLVVGS 198
L++GS
Sbjct: 99 RLILGS 104
>gi|294497658|ref|YP_003561358.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium QM B1551]
gi|295703028|ref|YP_003596103.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium DSM 319]
gi|294347595|gb|ADE67924.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium QM B1551]
gi|294800687|gb|ADF37753.1| 3-hexulose-6-phosphate synthase [Bacillus megaterium DSM 319]
Length = 209
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ V GG+ ++ +V+A DL++VG +Q + S A ++ +L
Sbjct: 158 KNAKTAVAGGIKLESLPEVVKAQPDLVIVGGGITSQDDKKSVASQMKEL 206
>gi|291085135|ref|ZP_06352165.2| dihydroorotate dehydrogenase family protein [Citrobacter youngae
ATCC 29220]
gi|291072078|gb|EFE10187.1| dihydroorotate dehydrogenase family protein [Citrobacter youngae
ATCC 29220]
Length = 380
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 71 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 125
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 126 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 180
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 181 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 221
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 222 DFPISGIGGI--ETWEDAAE 239
>gi|260753316|ref|YP_003226209.1| dihydroorotate dehydrogenase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552679|gb|ACV75625.1| dihydroorotate dehydrogenase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 355
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT-SRNIKSLVQAGADLL 194
G G + + + +++ A ++S+ + GGV + K+ ++AGA+ +
Sbjct: 281 GVCGDAIRWAGLEMVQRLAAFREEKSLDYAIVGVGGVNKPEHYKAYIEAGANAV 334
>gi|281412393|ref|YP_003346472.1| dihydroorotate dehydrogenase family protein [Thermotoga
naphthophila RKU-10]
gi|281373496|gb|ADA67058.1| dihydroorotate dehydrogenase family protein [Thermotoga
naphthophila RKU-10]
Length = 270
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVD--GGV-TSRNIKSLVQAGADLLVVGSSF 200
G G L + + + K K L V GGV + ++ + ++ GAD++ VGS+
Sbjct: 196 GLSGPLLKPIALRTVYEVKKRFPK----LFVIASGGVYSVKDAEEFLKVGADVIGVGSAL 251
Query: 201 FNQKGEISYA-KRLNDLKK 218
F G + K L ++K+
Sbjct: 252 FKDPGVVEEIGKYLLEVKR 270
>gi|241761402|ref|ZP_04759490.1| dihydroorotate dehydrogenase [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241374309|gb|EER63806.1| dihydroorotate dehydrogenase [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 355
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT-SRNIKSLVQAGADLL 194
G G + + + +++ A ++S+ + GGV + K+ ++AGA+ +
Sbjct: 281 GVCGDAIRWAGLEMVQRLAAFREEKSLDYAIVGVGGVNKPEHYKAYIEAGANAV 334
>gi|228989224|ref|ZP_04149218.1| Pyridoxal biosynthesis lyase pdxS [Bacillus pseudomycoides DSM
12442]
gi|228995407|ref|ZP_04155078.1| Pyridoxal biosynthesis lyase pdxS [Bacillus mycoides Rock3-17]
gi|229003021|ref|ZP_04160879.1| Pyridoxal biosynthesis lyase pdxS [Bacillus mycoides Rock1-4]
gi|228758221|gb|EEM07408.1| Pyridoxal biosynthesis lyase pdxS [Bacillus mycoides Rock1-4]
gi|228764333|gb|EEM13209.1| Pyridoxal biosynthesis lyase pdxS [Bacillus mycoides Rock3-17]
gi|228770499|gb|EEM19069.1| Pyridoxal biosynthesis lyase pdxS [Bacillus pseudomycoides DSM
12442]
Length = 295
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|229027861|ref|ZP_04184019.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH1271]
gi|229159189|ref|ZP_04287215.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus R309803]
gi|229170863|ref|ZP_04298468.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus MM3]
gi|228612598|gb|EEK69815.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus MM3]
gi|228624270|gb|EEK81070.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus R309803]
gi|228733453|gb|EEL84277.1| Pyridoxal biosynthesis lyase pdxS [Bacillus cereus AH1271]
Length = 295
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|188588371|ref|YP_001922232.1| thiamine-phosphate pyrophosphorylase [Clostridium botulinum E3 str.
Alaska E43]
gi|238689631|sp|B2UY65|THIE_CLOBA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|188498652|gb|ACD51788.1| thiamine-phosphate pyrophosphorylase [Clostridium botulinum E3 str.
Alaska E43]
Length = 210
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 25/58 (43%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + K + K S+ + V GG+ IK + D L + S+ QK + L +
Sbjct: 147 MSELKEITQKVSMPVVVIGGINKERIKDFKEINIDGLAIVSAIIAQKDIEKATRELKE 204
>gi|183597462|ref|ZP_02958955.1| hypothetical protein PROSTU_00736 [Providencia stuartii ATCC 25827]
gi|188023211|gb|EDU61251.1| hypothetical protein PROSTU_00736 [Providencia stuartii ATCC 25827]
Length = 256
Score = 35.1 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Query: 91 FHPES---SPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG 147
HP+ P +L + K+ V + + +L ++E+ +M + G
Sbjct: 98 IHPDVKYLLPDPVETLIAAEQLVKEGFVVLPYCSADPVLCRRLEEVGCAAVMPLGAPIGT 157
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGE 206
+ + K + +I + +I + VD G+ + ++ GAD ++V ++ K
Sbjct: 158 ---NKGLVTK-EMLRIIIEQSTIPVVVDAGIGAPSHAIEAIEMGADAVLVNTAIAVAKDP 213
Query: 207 ISYAKRLN-DLKKSALA 222
+ A+ L+ + LA
Sbjct: 214 VLMAQAFKVSLEAAELA 230
>gi|329851224|ref|ZP_08265981.1| glycosyl hydrolase family 2, sugar binding domain protein
[Asticcacaulis biprosthecum C19]
gi|328840070|gb|EGF89642.1| glycosyl hydrolase family 2, sugar binding domain protein
[Asticcacaulis biprosthecum C19]
Length = 681
Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Query: 7 IVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFD 66
I P L DF+ G N+ A IH D+MD G V + ++ +++ D
Sbjct: 159 IAP--LTGDFNVFGGLYRNVWLVSADDIHVDLMD-------HGGPGVYATTKAITNASAD 209
Query: 67 CHL 69
H+
Sbjct: 210 IHV 212
>gi|152991153|ref|YP_001356875.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Nitratiruptor sp.
SB155-2]
gi|167011543|sp|A6Q4V9|HIS4_NITSB RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|151423014|dbj|BAF70518.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide
[Nitratiruptor sp. SB155-2]
Length = 238
Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADL 193
+ ++ +N F G+ + +I++ +A S+ +E+ GG+ I+ + G +
Sbjct: 46 WLHLVDLNGAFAGE---PKNLEQIKKIRA---NTSLKIELGGGIRDEETIRKYIDLGIER 99
Query: 194 LVVGS 198
L++GS
Sbjct: 100 LILGS 104
>gi|70730949|ref|YP_260690.1| ThiJ/PfpI family protein [Pseudomonas fluorescens Pf-5]
gi|68345248|gb|AAY92854.1| ThiJ/PfpI family protein [Pseudomonas fluorescens Pf-5]
Length = 190
Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 121 TPVAILEDV-IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT 179
TP LED+ +DE+D++++ GG P IR+ +R + L G+
Sbjct: 51 TPDLALEDIRLDEVDLLMV------CGGTVWQSPQAPDIRELLRAAKERKLVLA---GIC 101
Query: 180 SRNIKSLVQAGA 191
+ L +AG
Sbjct: 102 DGT-RELARAGV 112
>gi|145220803|ref|YP_001131481.1| thiamine-phosphate pyrophosphorylase [Mycobacterium gilvum PYR-GCK]
gi|189030572|sp|A4T2R5|THIE_MYCGI RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|145213289|gb|ABP42693.1| thiamine-phosphate diphosphorylase [Mycobacterium gilvum PYR-GCK]
Length = 237
Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 155 IPKIRQAKALIG-KRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ +R+ AL K ++ GG+ ++ + ++ AGA +VV + + + A++L
Sbjct: 173 LDLVREVAALNTTKPWFAI---GGIDAQRLPDVLDAGARRVVVVRAITAAEDPRAAAEQL 229
Query: 214 NDLKKSA 220
+ SA
Sbjct: 230 AGMLDSA 236
>gi|300741497|ref|ZP_07071518.1| dihydroorotate oxidase [Rothia dentocariosa M567]
gi|300380682|gb|EFJ77244.1| dihydroorotate oxidase [Rothia dentocariosa M567]
Length = 363
Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 14/150 (9%)
Query: 74 IDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI 133
H+ + D++ I R + +A N L +
Sbjct: 221 PHRHVPLTVKIAPDLV------DEDITAVARLAQELKLDGIIATNTTIAREGLG--LHTT 272
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ G G+ L ++ + K IG + + V GGV +++++ + AGAD
Sbjct: 273 KEKINAIGAGGLSGEPLKTRSLEVLHLLKKEIGNKLALISV-GGVTNAQDVQERLDAGAD 331
Query: 193 LLVVGSSFFNQKGEISYA---KRLNDLKKS 219
LV G + F +G + A + L +++S
Sbjct: 332 -LVQGYTAFLYEGPLWAAHINRGLYKIRRS 360
>gi|256021689|ref|ZP_05435554.1| thiazole synthase [Shigella sp. D9]
Length = 256
Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ L VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPLVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|188578282|ref|YP_001915211.1| thiamine-phosphate pyrophosphorylase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188522734|gb|ACD60679.1| thiamine-phosphate pyrophosphorylase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 207
Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 22/56 (39%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++ GG+ + +LV AGADL+ V S + ++ +
Sbjct: 148 ALLEQAAELHLARVAIGGIAPAQVPALVTAGADLIAVVSGVYAAPDPVAAVQAYRA 203
>gi|188584171|ref|YP_001927616.1| thiamine-phosphate diphosphorylase [Methylobacterium populi BJ001]
gi|179347669|gb|ACB83081.1| Thiamine-phosphate diphosphorylase [Methylobacterium populi BJ001]
Length = 242
Score = 35.1 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALA 222
G+ + N S+++AGAD + + + F + A+ L ALA
Sbjct: 189 GIDASNAASVIRAGADGVALIGALFKGGATEAKARDLRARVDEALA 234
>gi|308070468|ref|YP_003872073.1| thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase)
[Paenibacillus polymyxa E681]
gi|305859747|gb|ADM71535.1| Thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase)
[Paenibacillus polymyxa E681]
Length = 237
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ + GG+T ++ + +AGAD + V S+ + K LN
Sbjct: 168 DVPIVGIGGITVDRVEEVARAGADGVAVISAVTQSEQVRGAVKELNK 214
>gi|284164801|ref|YP_003403080.1| photosystem I assembly BtpA [Haloterrigena turkmenica DSM 5511]
gi|284014456|gb|ADB60407.1| photosystem I assembly BtpA [Haloterrigena turkmenica DSM 5511]
Length = 278
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSF 200
GVTS + + AGAD ++VG++
Sbjct: 228 GVTSETVGDCLAAGADGVIVGTAL 251
>gi|282857161|ref|ZP_06266405.1| thiamine-phosphate diphosphorylase [Pyramidobacter piscolens W5455]
gi|282584947|gb|EFB90271.1| thiamine-phosphate diphosphorylase [Pyramidobacter piscolens W5455]
Length = 213
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQ---AGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ K + SI + GGVT+ N+ L GA ++ S+ F + A+RL L
Sbjct: 150 ELKRIAAAVSIPVVGIGGVTADNMPQLKGTGLCGAAVV---SALFAAPDVEASARRLRRL 206
Query: 217 K 217
Sbjct: 207 A 207
>gi|161528926|ref|YP_001582752.1| orotidine 5'-phosphate decarboxylase [Nitrosopumilus maritimus
SCM1]
gi|160340227|gb|ABX13314.1| orotidine 5'-phosphate decarboxylase [Nitrosopumilus maritimus
SCM1]
Length = 246
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 154 TIPKIRQAKALIGKRSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
T PKI Q + R +S+ G G N ++ AG + L+VG + N K AK
Sbjct: 179 TFPKIIQYCSKKAGRKLSIFSPGVGTQGGNASEVISAGTNYLIVGRTILNAKKPTDIAKD 238
Query: 213 LN 214
L
Sbjct: 239 LQ 240
>gi|27468608|ref|NP_765245.1| chain B, thiamin phosphate synthase [Staphylococcus epidermidis
ATCC 12228]
gi|32130185|sp|Q8CNK2|THIE_STAES RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|71153598|sp|Q5HMD0|THIE_STAEQ RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|27316155|gb|AAO05289.1|AE016749_235 Chain B, thiamin phosphate synthase [Staphylococcus epidermidis
ATCC 12228]
Length = 212
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I Q + I + GG+ N++ +V GAD + V S+ K
Sbjct: 154 ISQLRLYI--HDFPIVAIGGINETNVQPIVDEGADGISVISAITRSTNIDKTVK 205
>gi|152973864|ref|YP_001373381.1| pyridoxine biosynthesis protein [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|189036754|sp|A7GJS8|PDXS_BACCN RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|152022616|gb|ABS20386.1| pyridoxine biosynthesis protein [Bacillus cytotoxicus NVH 391-98]
Length = 295
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F + +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSENPEKFARAI 252
>gi|330446859|ref|ZP_08310510.1| nicotinate-nucleotide diphosphorylase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491050|dbj|GAA05007.1| nicotinate-nucleotide diphosphorylase [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 295
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + I++++ T +NP PV + + +DE+ + G L
Sbjct: 187 HIIACGGIKQAITTAKQ--------LNPNKPVEVETESLDELKQ----AIEAGADIVMLD 234
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
T+ +R+A A R ++LE G +T NI+ + G D + VG
Sbjct: 235 NFTLEMMREAVAFNKGR-VALENSGDITLSNIRECAETGVDYISVG 279
>gi|301019413|ref|ZP_07183588.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 69-1]
gi|300399267|gb|EFJ82805.1| thiazole biosynthesis protein ThiG [Escherichia coli MS 69-1]
Length = 256
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK K+ L
Sbjct: 213 PVNMAKAFRLAVKAGL 228
>gi|253699308|ref|YP_003020497.1| thiamine-phosphate pyrophosphorylase [Geobacter sp. M21]
gi|251774158|gb|ACT16739.1| thiamine-phosphate pyrophosphorylase [Geobacter sp. M21]
Length = 218
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
K++ L+ +L GG+ N G + + S+ + AK
Sbjct: 149 PVGTAKLKAVAELLQVPIFAL---GGINKENCAEASDCGVRGVALISAILSAADPREAAK 205
Query: 212 RLNDL 216
+L L
Sbjct: 206 KLIAL 210
>gi|239825595|ref|YP_002948219.1| pyridoxal biosynthesis lyase PdxS [Geobacillus sp. WCH70]
gi|259530398|sp|C5D337|PDXS_GEOSW RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|239805888|gb|ACS22953.1| pyridoxine biosynthesis protein [Geobacillus sp. WCH70]
Length = 294
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + ++ GAD + VGS F + YA+ +
Sbjct: 213 GGIATPADAALMMHLGADGVFVGSGIFKSENPEKYARAI 251
>gi|229581510|ref|YP_002839909.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
Y.N.15.51]
gi|228012226|gb|ACP47987.1| Orotidine 5'-phosphate decarboxylase [Sulfolobus islandicus
Y.N.15.51]
Length = 225
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 35/83 (42%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ + G Q+ ++ ++ + + + + + GG+ I L+ + V
Sbjct: 141 VDIIGFHVGLDVQKSRGISVADLKSEIRKVSELDLLISIAGGLNKDRILELIDLPVSIYV 200
Query: 196 VGSSFFNQKGEISYAKRLNDLKK 218
VG + K + +K + ++ K
Sbjct: 201 VGGAITRSKEPKNVSKEIVNILK 223
>gi|172061465|ref|YP_001809117.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia ambifaria
MC40-6]
gi|171993982|gb|ACB64901.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia ambifaria
MC40-6]
Length = 337
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A+ PV I + + ++D L G L T+ +R+A + +++ L
Sbjct: 241 AAFALESGVPVQIEVETLAQLDTALAH----GAQSVLLDNFTLDMMREAVRVAAGKAV-L 295
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 296 EVSGGVNFDTVRTFAETGVD 315
>gi|84622676|ref|YP_450048.1| thiamine-phosphate pyrophosphorylase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84366616|dbj|BAE67774.1| thiamin-phosphate pyrophosphorylas [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 207
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 22/56 (39%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++ GG+ + +LV AGADL+ V S + ++ +
Sbjct: 148 ALLQQAAELHLARVAIGGIAPAQVPALVTAGADLIAVVSGVYAAPDPVAAVQAYRA 203
>gi|119358065|ref|YP_912709.1| nicotinate-nucleotide pyrophosphorylase [carboxylating] [Chlorobium
phaeobacteroides DSM 266]
gi|119355414|gb|ABL66285.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Chlorobium
phaeobacteroides DSM 266]
Length = 291
Score = 35.1 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI----DMILIMTVNPGFGG 147
H ++S + +LR KK G+A+ ET V ++++ + + D++L+ G
Sbjct: 174 HIDASGGVANALRKARQYRKKHGLAVKIETEVRSIDELREALSCKPDIVLL-----DNFG 228
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
L+ + ++ + LE G V N+ + + G D +
Sbjct: 229 IDLLSDAVAFSKE-----NYPMVILEASGNVGLHNVAQIAETGVDYI 270
>gi|312958442|ref|ZP_07772962.1| hypothetical protein PFWH6_0338 [Pseudomonas fluorescens WH6]
gi|311286985|gb|EFQ65546.1| hypothetical protein PFWH6_0338 [Pseudomonas fluorescens WH6]
Length = 245
Score = 35.1 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F GQ + + I + ++ +++ GG+ + I+ V+AG +
Sbjct: 47 LHLVDLNGAFEGQPVNGEVVTAIAK-----RYPNLPIQIGGGIRSLETIEHYVKAGVSYV 101
Query: 195 VVGS-SFFNQKGEISYAKRLNDL 216
++G+ + K A+
Sbjct: 102 IIGTKAV---KDPAFVAEACRAF 121
>gi|295136290|ref|YP_003586966.1| PcrB-like protein [Zunongwangia profunda SM-A87]
gi|294984305|gb|ADF54770.1| PcrB-like protein [Zunongwangia profunda SM-A87]
Length = 234
Score = 35.1 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN-IKSLVQAGADLLVVGSSF 200
LI + I + K +I L V GG+ + +K +AGADL+V+G++F
Sbjct: 179 ALIPVSEKVIAEVKR---DLNIPLIVGGGIRNATQLKKAYKAGADLVVIGTAF 228
>gi|254994077|ref|ZP_05276267.1| pyridoxal biosynthesis lyase PdxS [Listeria monocytogenes FSL
J2-064]
Length = 211
Score = 35.1 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F +A +
Sbjct: 130 GGVATPADAALMMELGADGVFVGSGIFKSDNPAKFASAI 168
>gi|224027089|ref|ZP_03645455.1| hypothetical protein BACCOPRO_03850 [Bacteroides coprophilus DSM
18228]
gi|224020325|gb|EEF78323.1| hypothetical protein BACCOPRO_03850 [Bacteroides coprophilus DSM
18228]
Length = 205
Score = 35.1 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
+E T K+++ K I + + G + +L++AG + +S FN
Sbjct: 94 LEQTREKLKEVKTDIKVQKLK-----GAAADTGAALMKAGTTVFDATTSLFNAGKVKRQE 148
Query: 211 KRLNDLK 217
+ + LK
Sbjct: 149 QEIKGLK 155
>gi|153939792|ref|YP_001389400.1| hypothetical protein CLI_0054 [Clostridium botulinum F str.
Langeland]
gi|152935688|gb|ABS41186.1| conserved hypothetical protein [Clostridium botulinum F str.
Langeland]
gi|295317508|gb|ADF97885.1| conserved hypothetical protein [Clostridium botulinum F str.
230613]
Length = 240
Score = 35.1 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGF--------GGQQLIESTIPK-----IR 159
GV IN TP +L+ + D ID+ +++TV + G ++ + K +R
Sbjct: 114 MGVVINNPTPNDVLQQIKDTIDIPIVVTVVSEYEDIEARINSGATILNISGAKRTAYIVR 173
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + + GG +IK ++AGA+ +
Sbjct: 174 EIRKRY--PDFPIIATGGPNEASIKETIEAGANAI 206
>gi|146309267|ref|YP_001189732.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Pseudomonas mendocina
ymp]
gi|167012102|sp|A4Y084|HIS4_PSEMY RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|145577468|gb|ABP87000.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Pseudomonas mendocina
ymp]
Length = 245
Score = 35.1 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F GQ + + I + ++ +++ GG+ T I+ V+AG +
Sbjct: 47 LHLVDLNGAFEGQPVNGEVVTAIAK-----RYPNLPIQIGGGIRTLETIEHYVRAGVSYV 101
Query: 195 VVGS 198
++G+
Sbjct: 102 IIGT 105
>gi|58584784|ref|YP_198357.1| IMP dehydrogenase, GuaB [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419100|gb|AAW71115.1| IMP dehydrogenase, GuaB [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 498
Score = 35.1 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 14/128 (10%)
Query: 87 DIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG-- 144
D H E+ +++ I M T + E +ID + + + PG
Sbjct: 249 DTAHGHSENVID---TIKEIKTMYPNTQLVGGNIATKEAAEALIDAGVDAVKVGIGPGSI 305
Query: 145 -----FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGS 198
G + I+ R + L DGG+ +I + AGAD +++GS
Sbjct: 306 CTTRVVTGVGV--PQFSAIQSVAETCKARKVRLIADGGIKYSGDIAKAIAAGADSVMIGS 363
Query: 199 SFFNQKGE 206
F E
Sbjct: 364 -IFAGTDE 370
>gi|291298437|ref|YP_003509715.1| thiamine-phosphate pyrophosphorylase [Stackebrandtia nassauensis
DSM 44728]
gi|290567657|gb|ADD40622.1| thiamine-phosphate pyrophosphorylase [Stackebrandtia nassauensis
DSM 44728]
Length = 218
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 175 DGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GGVT+ L++AGA + VVG + + + L D+ + A
Sbjct: 165 IGGVTAATAGELIEAGAHGVAVVG-AISLAPDPYAATRELLDVVERA 210
>gi|87045842|gb|ABD17739.1| glycosyltransferase [Methanococcus voltae PS]
Length = 351
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 24/77 (31%)
Query: 34 IHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
IH + G F+ ++ ++ H+ ++ + + + FH
Sbjct: 169 IHLVYVGGLFLEDVIMYESFYTFYPKITNQKIHLHIYSKISRETLDRFKEIEKEDMYFHY 228
Query: 94 ESSPHIRRSLRTIHAMG 110
E + ++ I
Sbjct: 229 EGALSHDELIKEITKYD 245
>gi|70998588|ref|XP_754016.1| 5-proFAR isomerase His6 [Aspergillus fumigatus Af293]
gi|66851652|gb|EAL91978.1| 5-proFAR isomerase His6, putative [Aspergillus fumigatus Af293]
gi|159126250|gb|EDP51366.1| 5-proFAR isomerase [Aspergillus fumigatus A1163]
Length = 256
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
AK + L+V GG+ +N + + GAD +++ S F
Sbjct: 66 EAAKEALRTWPGGLQVAGGINDKNARYWIDQGADKVIITSFLF 108
>gi|217077969|ref|YP_002335687.1| nicotinate-nucleotide pyrophosphorylase [Thermosipho africanus
TCF52B]
gi|217037824|gb|ACJ76346.1| nicotinate-nucleotide pyrophosphorylase [Thermosipho africanus
TCF52B]
Length = 271
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETP-----VAILEDVIDEIDMILIMTVNPGFGGQQLI 151
+ ++ ++I + I P T V E++ + +D+ + + + F
Sbjct: 156 DNHKKIYKSIRKA-VEAVKVIKPFTSKIEVEVEDFEELRECLDLEVDIIMLDNF------ 208
Query: 152 ESTIPKIRQAKALIGKR--SISLEVDGGVTSRNIKSLVQAGADLL 194
+ I++A +I ++ I +EV GG+ +N+ + G D++
Sbjct: 209 --SPEDIKEAIKIIKEKRKDIIIEVSGGINEKNLDEYLIKGVDVI 251
>gi|154483704|ref|ZP_02026152.1| hypothetical protein EUBVEN_01408 [Eubacterium ventriosum ATCC
27560]
gi|149735614|gb|EDM51500.1| hypothetical protein EUBVEN_01408 [Eubacterium ventriosum ATCC
27560]
Length = 225
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
KA+ SI + GG+T N+K L +G + V S+ F K + K L
Sbjct: 164 LKAICEAVSIPVIAIGGITKDNVKELAGSGICGIAVISAIFASKDIETATKELK 217
>gi|148378045|ref|YP_001252586.1| hypothetical protein CBO0038 [Clostridium botulinum A str. ATCC
3502]
gi|153933357|ref|YP_001382444.1| hypothetical protein CLB_0049 [Clostridium botulinum A str. ATCC
19397]
gi|153935104|ref|YP_001385997.1| hypothetical protein CLC_0058 [Clostridium botulinum A str. Hall]
gi|168181150|ref|ZP_02615814.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|168184988|ref|ZP_02619652.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|170756580|ref|YP_001779661.1| hypothetical protein CLD_0779 [Clostridium botulinum B1 str. Okra]
gi|226947251|ref|YP_002802342.1| hypothetical protein CLM_0044 [Clostridium botulinum A2 str. Kyoto]
gi|237793349|ref|YP_002860901.1| hypothetical protein CLJ_B0043 [Clostridium botulinum Ba4 str. 657]
gi|148287529|emb|CAL81591.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
3502]
gi|152929401|gb|ABS34901.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
19397]
gi|152931018|gb|ABS36517.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
gi|169121792|gb|ACA45628.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
gi|182668019|gb|EDT79998.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
gi|182671967|gb|EDT83928.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|226841052|gb|ACO83718.1| conserved hypothetical protein [Clostridium botulinum A2 str.
Kyoto]
gi|229261714|gb|ACQ52747.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
Length = 240
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGF--------GGQQLIESTIPK-----IR 159
GV IN TP +L+ + D ID+ +++TV + G ++ + K +R
Sbjct: 114 MGVVINNPTPNDVLQQIKDTIDIPIVVTVVSEYEDIEARINSGATILNISGAKKTAYIVR 173
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + + GG +IK ++AGA+ +
Sbjct: 174 EIRKRY--PDFPIIATGGPNEASIKETIEAGANAI 206
>gi|58580746|ref|YP_199762.1| thiamine-phosphate pyrophosphorylase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58425340|gb|AAW74377.1| thiamin-phosphate pyrophosphorylase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 223
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 22/56 (39%)
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+ ++ GG+ + +LV AGADL+ V S + ++ +
Sbjct: 164 ALLEQAAELHLARVAIGGIAPAQVPALVTAGADLIAVVSGVYAAPDPVAAVQAYRA 219
>gi|78188467|ref|YP_378805.1| IMP dehydrogenase [Chlorobium chlorochromatii CaD3]
gi|78170666|gb|ABB27762.1| inosine-5'-monophosphate dehydrogenase [Chlorobium chlorochromatii
CaD3]
Length = 497
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 102 SLRTIHAMGKKT-GVAINPETPVAILEDVIDEIDMILIMTVNPG-------FGGQQLIES 153
++ I + +A N TP + D++ + + + PG G +
Sbjct: 266 MVKKIKSHYPDLQVIAGNVATP-EAVRDLVKAGADCVKVGIGPGSICTTRIVAGVGM--P 322
Query: 154 TIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
+ I + K + + DGG+ +I + AGAD +++GS F E
Sbjct: 323 QLTAIMKCAEEAAKTNTPIIADGGIKYSGDIAKALAAGADSVMMGS-IFAGTDESPGETV 381
Query: 213 LNDLKK 218
L + +K
Sbjct: 382 LYEGRK 387
>gi|20089833|ref|NP_615908.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Methanosarcina acetivorans C2A]
gi|19914779|gb|AAM04388.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Methanosarcina acetivorans C2A]
Length = 277
Score = 35.1 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 158 IRQAKALIGKRSIS----LEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
IR+ AL+ ++ + +E GG++ N++ + G D++ +GS +
Sbjct: 214 IRETLALLEEKGLRKSVLVEASGGISPANLEGYAKTGVDVISMGSLIHKSR 264
>gi|283856189|ref|YP_161855.2| dihydroorotate dehydrogenase [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775185|gb|AAV88744.2| dihydroorotate dehydrogenase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 355
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSIS--LEVDGGVT-SRNIKSLVQAGADLL 194
G G + + + +++ A ++S+ + GGV + K+ ++AGA+ +
Sbjct: 281 GVCGDAIRWAGLEMVQRLAAFREEKSLDYAIVGVGGVNKPEHYKAYIEAGANAV 334
>gi|299821191|ref|ZP_07053079.1| pyridoxine biosynthesis protein [Listeria grayi DSM 20601]
gi|299816856|gb|EFI84092.1| pyridoxine biosynthesis protein [Listeria grayi DSM 20601]
Length = 329
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F +A +
Sbjct: 248 GGVATPADAALMMELGADGVFVGSGIFKSDNPAKFANAI 286
>gi|167767413|ref|ZP_02439466.1| hypothetical protein CLOSS21_01932 [Clostridium sp. SS2/1]
gi|167711388|gb|EDS21967.1| hypothetical protein CLOSS21_01932 [Clostridium sp. SS2/1]
gi|291559271|emb|CBL38071.1| thiamine-phosphate diphosphorylase [butyrate-producing bacterium
SSC/2]
Length = 223
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLK 217
+ K + I + GG+ NIK+L D + VV S+ F K K+L L
Sbjct: 159 EEIKKICHTVEIPVVAIGGIKKENIKTLEGTDVDGVAVV-SAIFAAKDIKKDTKQLRSLV 217
Query: 218 K 218
+
Sbjct: 218 E 218
>gi|158424098|ref|YP_001525390.1| FAD dependent oxidoreductase [Azorhizobium caulinodans ORS 571]
gi|158330987|dbj|BAF88472.1| FAD dependent oxidoreductase [Azorhizobium caulinodans ORS 571]
Length = 479
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 128 DVIDEIDMI-LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSL 186
V+ + L PG GQ + + ++R+ +++ + ++ VDGG N++
Sbjct: 68 PVLPQGGNTSLCGGAVPGTDGQPPVIVALSRLRRIRSVDPANN-AMVVDGGCVLANVQEA 126
Query: 187 V-QAG 190
+AG
Sbjct: 127 AREAG 131
>gi|126727211|ref|ZP_01743047.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Rhodobacterales
bacterium HTCC2150]
gi|126703420|gb|EBA02517.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Rhodobacterales
bacterium HTCC2150]
Length = 208
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 8/50 (16%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFN--------QKGEISYAKRLNDLK 217
GG++ N++ AG + +GS+ F K ++ K + +
Sbjct: 159 GGISPDNMEPYCNAGTNGFGLGSALFKPSYSVEEVAKRAQAFIKAIKEFA 208
>gi|92112650|ref|YP_572578.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Chromohalobacter
salexigens DSM 3043]
gi|122420740|sp|Q1R079|HIS4_CHRSD RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|91795740|gb|ABE57879.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Chromohalobacter
salexigens DSM 3043]
Length = 249
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F G+ + + I +A + +++ GG+ T+ I++ ++AG +
Sbjct: 47 LHLVDLNGAFEGKPVNAEAVTAIARA-----YPDLPIQIGGGIRTAETIEAYLEAGVSYV 101
Query: 195 VVGS 198
++G+
Sbjct: 102 IIGT 105
>gi|28899985|ref|NP_799640.1| thiamine-phosphate pyrophosphorylase [Vibrio parahaemolyticus RIMD
2210633]
gi|260363279|ref|ZP_05776148.1| thiamine-phosphate diphosphorylase [Vibrio parahaemolyticus K5030]
gi|260880566|ref|ZP_05892921.1| thiamine-phosphate diphosphorylase [Vibrio parahaemolyticus
AN-5034]
gi|260898481|ref|ZP_05906977.1| thiamine-phosphate diphosphorylase [Vibrio parahaemolyticus
Peru-466]
gi|31077017|sp|Q87JW8|THIE_VIBPA RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|28808268|dbj|BAC61473.1| putative thiamine monophosphate synthase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308084944|gb|EFO34639.1| thiamine-phosphate diphosphorylase [Vibrio parahaemolyticus
Peru-466]
gi|308092467|gb|EFO42162.1| thiamine-phosphate diphosphorylase [Vibrio parahaemolyticus
AN-5034]
gi|308112059|gb|EFO49599.1| thiamine-phosphate diphosphorylase [Vibrio parahaemolyticus K5030]
Length = 204
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + S+ + GG+ NI +L G L + S+ + + A+ L L
Sbjct: 147 LKMALNTTSLPIVAIGGINETNIPALSATGVHGLALVSAICHAENPTKAAEYLLSL 202
>gi|329955904|ref|ZP_08296707.1| nicotinate-nucleotide diphosphorylase [Bacteroides clarus YIT
12056]
gi|328525284|gb|EGF52334.1| nicotinate-nucleotide diphosphorylase [Bacteroides clarus YIT
12056]
Length = 282
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + + I +++ K+ G + E V +++ +D+ G
Sbjct: 169 HVDFAGGIDKAITRAKEYCKEKGKDLKIEIEVRNFDELQQVLDL-------GGVDRIMFD 221
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
T R+A ++ R E GG+T ++ + G D + VG
Sbjct: 222 NFTPEMTRKAVEMVAGR-YETESSGGITFDTLRDYAECGVDFISVG 266
>gi|312792684|ref|YP_004025607.1| transposase is4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312792886|ref|YP_004025809.1| transposase is4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312792930|ref|YP_004025853.1| transposase is4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312793427|ref|YP_004026350.1| transposase is4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312793462|ref|YP_004026385.1| transposase is4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312793785|ref|YP_004026708.1| transposase is4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312794646|ref|YP_004027569.1| transposase is4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312179824|gb|ADQ39994.1| transposase IS4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180026|gb|ADQ40196.1| transposase IS4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180070|gb|ADQ40240.1| transposase IS4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180567|gb|ADQ40737.1| transposase IS4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180602|gb|ADQ40772.1| transposase IS4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180925|gb|ADQ41095.1| transposase IS4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181786|gb|ADQ41956.1| transposase IS4 family protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 567
Score = 35.1 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 145 FGGQQLIESTIPKI-RQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVV 196
F G + T+ KI R+ K I + D G+ N+K + +AG D +V
Sbjct: 240 FPGNTIDSKTMVKILRKLKEKFSIDKIIIVADKGLNSRINLKMIKEAGYDYIVA 293
>gi|330813383|ref|YP_004357622.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486478|gb|AEA80883.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Candidatus Pelagibacter sp. IMCC9063]
Length = 237
Score = 35.1 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 161 AKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
K + S+ ++V GG+ T NI+ +++ G + +V+G++ + ++ LK+
Sbjct: 66 IKEIAKNTSLKIQVGGGLRTLENIEEVLRLGVENVVMGTA---------AVENIDLLKEV 116
Query: 220 AL 221
++
Sbjct: 117 SI 118
>gi|322804307|emb|CBZ01857.1| putative enzyme with TIM-barrel fold [Clostridium botulinum H04402
065]
Length = 240
Score = 35.1 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGF--------GGQQLIESTIPK-----IR 159
GV IN TP +L+ + D ID+ +++TV + G ++ + K +R
Sbjct: 114 MGVVINNPTPNDVLQQIKDTIDIPIVVTVVSEYEDIEARINSGATILNISGAKKTAYIVR 173
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + + GG +IK ++AGA+ +
Sbjct: 174 EIRKRY--PDFPIIATGGPNEASIKETIEAGANAI 206
>gi|224371545|ref|YP_002605709.1| probable 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Desulfobacterium
autotrophicum HRM2]
gi|223694262|gb|ACN17545.1| probable 1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Desulfobacterium
autotrophicum HRM2]
Length = 261
Score = 35.1 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GG+T N + AGA ++V S F+ G++ +RL L K
Sbjct: 89 GGITPDNALRFLDAGASHVIVTSYVFSA-GKVD-MERLKLLVK 129
>gi|189462278|ref|ZP_03011063.1| hypothetical protein BACCOP_02964 [Bacteroides coprocola DSM 17136]
gi|189431017|gb|EDV00002.1| hypothetical protein BACCOP_02964 [Bacteroides coprocola DSM 17136]
Length = 391
Score = 35.1 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 13/112 (11%)
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV-DGG-VTSR 181
L ++ IL + F + + + K I +R + V GG T +
Sbjct: 109 NSLTGLLSMGGTILGTSREKPFKNRANVPVSEDKPAMMLKTIRERKLDCVVCIGGNGTQK 168
Query: 182 NIKSLVQAGADLL---------VVGSSF-FNQKGEISYA-KRLNDLKKSALA 222
L G +++ V G+ F +S A + ++ L +A A
Sbjct: 169 TAAKLAATGVNVVTVPKTIDNDVWGTDISFGFDSAVSIATEAIDRLHSTASA 220
>gi|166367001|ref|YP_001659274.1| thiamine-phosphate pyrophosphorylase [Microcystis aeruginosa
NIES-843]
gi|166089374|dbj|BAG04082.1| thiamine-phosphate pyrophosphorylase [Microcystis aeruginosa
NIES-843]
Length = 338
Score = 35.1 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 26/97 (26%)
Query: 95 SSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIEST 154
S+ + + + I GV TP + +
Sbjct: 241 STTNPQEMAKAIQEKADYVGVGPVYATPTKAGK-----------------------TPAG 277
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+ +R A+ ++ GG+ S NIK +++AGA
Sbjct: 278 LEYVRYARENCPLPWFAI---GGIDSSNIKEVLEAGA 311
>gi|57867630|ref|YP_189263.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
RP62A]
gi|282876502|ref|ZP_06285368.1| thiamine-phosphate diphosphorylase [Staphylococcus epidermidis
SK135]
gi|57638288|gb|AAW55076.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
RP62A]
gi|281294754|gb|EFA87282.1| thiamine-phosphate diphosphorylase [Staphylococcus epidermidis
SK135]
gi|329726150|gb|EGG62622.1| thiamine-phosphate diphosphorylase [Staphylococcus epidermidis
VCU144]
gi|329734187|gb|EGG70505.1| thiamine-phosphate diphosphorylase [Staphylococcus epidermidis
VCU045]
Length = 213
Score = 35.1 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I Q + I + GG+ N++ +V GAD + V S+ K
Sbjct: 155 ISQLRLYI--HDFPIVAIGGINETNVQPIVDEGADGISVISAITRSTNIDKTVK 206
>gi|172058109|ref|YP_001814569.1| nicotinate-nucleotide pyrophosphorylase [Exiguobacterium sibiricum
255-15]
gi|171990630|gb|ACB61552.1| nicotinate-nucleotide pyrophosphorylase [Exiguobacterium sibiricum
255-15]
Length = 280
Score = 35.1 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 141 VNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
V G L T +I++ ++ I K SI++E+ GG+T + + + GAD + +G
Sbjct: 202 VAAGVDIIMLDNRTPEEIKRFRSWIPK-SITVELSGGITLDTLPAYSECGADYISLG 257
>gi|312958134|ref|ZP_07772657.1| 2-dehydro-3-deoxyphosphogluconate aldolase [Pseudomonas fluorescens
WH6]
gi|311287565|gb|EFQ66123.1| 2-dehydro-3-deoxyphosphogluconate aldolase [Pseudomonas fluorescens
WH6]
Length = 206
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 71 ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINP--ETPVAILED 128
+ + + + + AG +I + + A K G+ ++P TP
Sbjct: 69 VLTPEQ-VEQVKAAGGQVIVM-------PHSDAKVLRAA-KAAGLYLSPGVATPTEAFAA 119
Query: 129 VIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQ 188
+ + D++ + F +Q+ + I+ A++ + ++ L V GG+ N++
Sbjct: 120 LAEGADVLKL------FPAEQMGPAV---IKAWLAVLPQGTLLLPV-GGINPDNMQVFTD 169
Query: 189 AGADLLVVGSSFFN 202
AGA +GS F
Sbjct: 170 AGAKGFGLGSGLFK 183
>gi|295402719|ref|ZP_06812661.1| pyridoxine biosynthesis protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109162|ref|YP_003987478.1| pyridoxine biosynthesis protein [Geobacillus sp. Y4.1MC1]
gi|294975250|gb|EFG50886.1| pyridoxine biosynthesis protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214263|gb|ADP72867.1| pyridoxine biosynthesis protein [Geobacillus sp. Y4.1MC1]
Length = 294
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + ++ GAD + VGS F + YA+ +
Sbjct: 213 GGIATPADAALMMHLGADGVFVGSGIFKSENPEKYARAI 251
>gi|239831192|ref|ZP_04679521.1| nicotinate-nucleotide pyrophosphorylase [Ochrobactrum intermedium
LMG 3301]
gi|239823459|gb|EEQ95027.1| nicotinate-nucleotide pyrophosphorylase [Ochrobactrum intermedium
LMG 3301]
Length = 285
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 104 RTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKA 163
I G + E V + ++D + + V+ L + ++R+A +
Sbjct: 182 EAIERAKAGAGHMVKIEVEVDT----LQQLDEAMAVGVDA----VLLDNMSPDQLREAVS 233
Query: 164 LIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+I R+IS E GG+T + ++ +G DL+ VG
Sbjct: 234 IIDGRAIS-EASGGITPETVAAVAASGVDLISVG 266
>gi|170760354|ref|YP_001785364.1| hypothetical protein CLK_3172 [Clostridium botulinum A3 str. Loch
Maree]
gi|169407343|gb|ACA55754.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 240
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGF--------GGQQLIESTIPK-----IR 159
GV IN TP +L+ + D ID+ +++TV + G ++ + K +R
Sbjct: 114 MGVVINNPTPNDVLQQIKDTIDIPIVVTVVSEYEDIEARINSGATILNISGAKKTAYIVR 173
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + + GG +IK ++AGA+ +
Sbjct: 174 EIRKRY--PDFPIIATGGPNEASIKETIEAGANAI 206
>gi|222054517|ref|YP_002536879.1| phosphomethylpyrimidine kinase [Geobacter sp. FRC-32]
gi|221563806|gb|ACM19778.1| phosphomethylpyrimidine kinase [Geobacter sp. FRC-32]
Length = 497
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
A+ + + + GG+ N +V GAD L V S+ +
Sbjct: 159 EALPAIKERVKLPVVAIGGINRDNGSQIVDNGADALAVISAILGHREP 206
>gi|146299973|ref|YP_001194564.1| inosine-5'-monophosphate dehydrogenase [Flavobacterium johnsoniae
UW101]
gi|146154391|gb|ABQ05245.1| inosine-5'-monophosphate dehydrogenase [Flavobacterium johnsoniae
UW101]
Length = 490
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 16/133 (12%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKT----GVAINPETPVAILEDVIDEI 133
+ AG D I + H + + + K + N TP + +++
Sbjct: 237 AEALVAAGVDAIII-DTAHGHTEGVVNVLKEVKSKFPQIDVIVGNIATP-EAAKYLVESG 294
Query: 134 DMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKS 185
+ + + PG G + + A I + + DGG+ + +I
Sbjct: 295 ADGVKVGIGPGSICTTRIVAGVGF--PQFSAVLEVAAAIKGTGVPVIADGGIRYTGDIPK 352
Query: 186 LVQAGADLLVVGS 198
+ AGAD +++GS
Sbjct: 353 AIAAGADCVMLGS 365
>gi|67464028|pdb|1ZNN|A Chain A, Structure Of The Synthase Subunit Of Plp Synthase
gi|67464029|pdb|1ZNN|B Chain B, Structure Of The Synthase Subunit Of Plp Synthase
gi|67464030|pdb|1ZNN|C Chain C, Structure Of The Synthase Subunit Of Plp Synthase
gi|67464031|pdb|1ZNN|D Chain D, Structure Of The Synthase Subunit Of Plp Synthase
gi|67464032|pdb|1ZNN|E Chain E, Structure Of The Synthase Subunit Of Plp Synthase
gi|67464033|pdb|1ZNN|F Chain F, Structure Of The Synthase Subunit Of Plp Synthase
Length = 325
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGVT + ++ GAD + VGS F + YA+ +
Sbjct: 244 GGVTTPADAALMMHLGADGVFVGSGIFKSENPEKYARAI 282
>gi|319399578|gb|EFV87833.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
FRI909]
Length = 212
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I Q + I + + GG+ N++ +V GAD + V S+ K
Sbjct: 154 ISQLRLYI--HDVPIVAIGGINETNVQPIVDEGADGISVISAITRSTNIDKTVK 205
>gi|297200348|ref|ZP_06917745.1| 2-deoxy-D-gluconate 3-dehydrogenase [Streptomyces sviceus ATCC
29083]
gi|297147636|gb|EDY53498.2| 2-deoxy-D-gluconate 3-dehydrogenase [Streptomyces sviceus ATCC
29083]
Length = 279
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
G+ +L +AGAD++V + + + K + A A +
Sbjct: 30 GIGLATAIALGRAGADVVV--NYVVGAEDAENVVKEIESFGVRAYAHE 75
>gi|154271830|ref|XP_001536768.1| 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)
imidazole-4-carboxamide isomerase [Ajellomyces
capsulatus NAm1]
gi|150409438|gb|EDN04888.1| 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)
imidazole-4-carboxamide isomerase [Ajellomyces
capsulatus NAm1]
Length = 243
Score = 35.1 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLV 195
L+V GG+ +N + ++AGA+ V
Sbjct: 79 LQVAGGINDKNARYWIEAGAEKFV 102
>gi|320179547|gb|EFW54498.1| Thiazole biosynthesis protein ThiG [Shigella boydii ATCC 9905]
Length = 271
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 113 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 172
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 173 NQGLETHAMLEI-----IIQQATVPVVVDAGIDVPSHAAQALEMGADAVLVNTAIAVADD 227
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 228 PVNMAKAFRLAVEAGL 243
>gi|289548795|ref|YP_003473783.1| orotidine 5'-phosphate decarboxylase [Thermocrinis albus DSM 14484]
gi|289182412|gb|ADC89656.1| orotidine 5'-phosphate decarboxylase [Thermocrinis albus DSM 14484]
Length = 222
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 24/171 (14%)
Query: 59 SYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAIN 118
D L + S + D +T H S ++ + K GVA+
Sbjct: 59 KLHDIPNTVALAVESAER-------LSADYLTLHLSSGYEALKAAVEVRRKIKLLGVALL 111
Query: 119 PETPVAILEDVIDEIDMIL--------IMTVNPGFGGQQLIEST--IPKIRQAKALIGKR 168
T + ED + ++ + L +M V G + S +P +++ +
Sbjct: 112 --TSLD--EDFLRDVGVCLPKDEYFTKLMDVGIKAGIDGFVCSVYELPIVKERGFMAVVP 167
Query: 169 SISLEVD---GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ +E D ++ V+ AD++VVG S + I + + L
Sbjct: 168 GVRVEGDPTDDQKRVATLREAVEGKADMVVVGRSILRAEDPIKRVEEILHL 218
>gi|261601872|gb|ACX91475.1| geranylgeranylglyceryl phosphate synthase [Sulfolobus solfataricus
98/2]
Length = 248
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ I I+ A SI L V GG+ + LV+AGAD++V G+ +
Sbjct: 185 PIRPEMISFIKNA------SSIPLIVGGGIRSVEVALKLVEAGADIIVTGNII--ESDVN 236
Query: 208 SYAKRLNDLKK 218
K + +K
Sbjct: 237 KAIKIIRGIKN 247
>gi|213646116|ref|ZP_03376169.1| dihydropyrimidine dehydrogenase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 335
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 46/200 (23%)
Query: 4 SIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNIS---FGADV------- 53
+ I SI+ + + E + +AGA I + P ++ G+DV
Sbjct: 26 KVLIA-SIMGENEQQWQELARLVEEAGADMIECNFS----CPQMTSHAMGSDVGQSPELV 80
Query: 54 ---IRSLRSYSDSVFDCHLM--ISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHA 108
R+++ S + I + G D I ++ + +S+ I
Sbjct: 81 EKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGI-----ATINTVKSITNIDL 135
Query: 109 MGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
K +N ++ ++ G+ G+ + + I+Q + R
Sbjct: 136 NRKIGMPVVNGKSSIS-------------------GYSGKAVKPIALRFIQQLRMHPELR 176
Query: 169 SISLEVDGGVTSRNIKSLVQ 188
+ GG+ + +
Sbjct: 177 DFPISGIGGI--ETWEDAAE 194
>gi|119025736|ref|YP_909581.1| 16S ribosomal RNA methyltransferase RsmE [Bifidobacterium
adolescentis ATCC 15703]
gi|118765320|dbj|BAF39499.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
Length = 265
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV----DGGVTSRNIKSLV 187
DM++++ + +E+ I K+ L R ++ V +GG++ +++
Sbjct: 173 HGDMVIVL-HQDATKTWEQLETGIAKLSDTC-LKDGRPRTIYVLVGPEGGISDAEVEAFT 230
Query: 188 QAGADLLVVGSSFFNQ 203
+AGA++ V+GS+
Sbjct: 231 KAGAEVCVLGSNILRA 246
>gi|256545657|ref|ZP_05473014.1| thiamine-phosphate diphosphorylase [Anaerococcus vaginalis ATCC
51170]
gi|256398633|gb|EEU12253.1| thiamine-phosphate diphosphorylase [Anaerococcus vaginalis ATCC
51170]
Length = 203
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 22/58 (37%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
I K + + I + GG+ N++ L D + V + + K + L +
Sbjct: 141 IETLKKIKEEVDIDIYAIGGLNIENVEILKNTKVDGICVVRAIMDAKDVYQTSLELKE 198
>gi|227551243|ref|ZP_03981292.1| TIM-barrel fold family protein [Enterococcus faecium TX1330]
gi|293377011|ref|ZP_06623222.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
gi|227179618|gb|EEI60590.1| TIM-barrel fold family protein [Enterococcus faecium TX1330]
gi|292644380|gb|EFF62479.1| conserved hypothetical protein [Enterococcus faecium PC4.1]
Length = 227
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGF--------GGQQLIESTIPK--IRQAKA 163
GV +N TP+ +++V +D+ +I TV + G +I + K + +
Sbjct: 109 GVVLNGPTPLETVKEVCRVVDIPVISTVTSKYTEIDEKLAAGISIINISAGKETVEAVRH 168
Query: 164 LIGKR-SISLEVDGGVTSRNIKSLVQAGADLL 194
K + + GG T +I +QAGA+ +
Sbjct: 169 FRKKYPELPIIATGGPTEESIAETIQAGANAI 200
>gi|203288639|ref|YP_002223546.1| Inosine-5'-monophosphate dehydrogenase [Borrelia duttonii Ly]
gi|201084346|gb|ACH93934.1| Inosine-5'-monophosphate dehydrogenase [Borrelia duttonii Ly]
Length = 483
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 10/129 (7%)
Query: 78 INIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + A D+I H S+ + +R I + V D+ID
Sbjct: 237 VEELVKADVDVIVVDSAHGHSTK-VIEIVRKIKSKYPNLDVIAGNIVTKEAAFDLIDAGA 295
Query: 135 MILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQ 188
L + + PG I + I +I + DGG+ +I +
Sbjct: 296 DCLKVGIGPGSICTTRIVAGVGVPQLTAINDVFEACKDTNICIIADGGIRFSGDIVKAIA 355
Query: 189 AGADLLVVG 197
AGAD +++G
Sbjct: 356 AGADSVMIG 364
>gi|160881388|ref|YP_001560356.1| HAD family hydrolase [Clostridium phytofermentans ISDg]
gi|160430054|gb|ABX43617.1| HAD-superfamily hydrolase, subfamily IA, variant 1 [Clostridium
phytofermentans ISDg]
Length = 216
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 35 HFDV-MDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHP 93
HFD+ ++ G ++ DS D I+ + D +
Sbjct: 31 HFDIHIENLDSLCKYIGPPIV-------DSFMDFGFSKEKALEAIDKYREYFKDYGIYEN 83
Query: 94 ESSPHIRRSLRTIHAMGKKTGVAI-NPETPVAILED---VIDEIDMILIMTVNPGFGGQQ 149
E + + L T+ + KK +A PE + + +++ D + +N +
Sbjct: 84 EVYKGVVQLLATLRSRNKKIMLATSKPEVFAKQILEHFELLEYFDFVGGSELNGDRSEKS 143
Query: 150 -LIESTIP--KIRQAKA--LIGKRSISL----EV-DGGVTSRNI----KSLVQAGADLLV 195
+I+ + K+ +IG R + EV + N + L+ AGAD +V
Sbjct: 144 EVIQYVLKEGKVTDLTKAVMIGDRKYDIFGAKEVGIDSIGVLNGYGDQEELIAAGADAIV 203
Query: 196 V 196
Sbjct: 204 A 204
>gi|91772185|ref|YP_564877.1| tryptophan synthase subunit alpha [Methanococcoides burtonii DSM
6242]
gi|91711200|gb|ABE51127.1| Tryptophan synthase alpha chain [Methanococcoides burtonii DSM
6242]
Length = 259
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 19/151 (12%)
Query: 75 DSHINIIADAGCDIITFH---PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID 131
+ + +G + E S + G + P T +E ++
Sbjct: 108 EKFVKDCISSGISGLIIPDLPAEESADLANCCSQ---EGVDLIFLVAPITTDERIEMILS 164
Query: 132 EIDMILIMTVNPGFGGQQ--LIESTIPKIRQAKALIGKR-SISLEVDGGVTSRNIKSLVQ 188
+ + + G G + + +T I + + I K + + ++
Sbjct: 165 KTSGFVYIVSRSGVTGTRSDVTAATSDIISRVRTDIPKAVGFGIS-----NAEQAAKIID 219
Query: 189 AGADLLVVGSS---FFNQKGEISYAKRLNDL 216
AGAD ++VGS+ ++ KRL DL
Sbjct: 220 AGADGVIVGSAFVDIIASGNDVE--KRLEDL 248
>gi|409790|gb|AAC43089.1| ORF_f281 [Escherichia coli str. K-12 substr. MG1655]
Length = 281
Score = 35.1 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 123 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 182
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 183 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 237
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 238 PVNMAKAFRLAVEAGL 253
>gi|328469972|gb|EGF40883.1| thiamine-phosphate pyrophosphorylase [Vibrio parahaemolyticus
10329]
Length = 204
Score = 35.1 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
K + S+ + GG+ NI +L G L + S+ + + A+ L L
Sbjct: 147 LKMALNTTSLPIVAIGGINETNIPALSATGVHGLALVSAICHAENPTKAAEYLLSL 202
>gi|290968337|ref|ZP_06559878.1| thiamine-phosphate diphosphorylase [Megasphaera genomosp. type_1
str. 28L]
gi|290781612|gb|EFD94199.1| thiamine-phosphate diphosphorylase [Megasphaera genomosp. type_1
str. 28L]
Length = 215
Score = 35.1 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 11/147 (7%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMIL 137
+++ D I H +R GV+ T + E V D D +
Sbjct: 80 VDLAVACEADGI--HVGQDDAPVSFVRQWAGPQMLIGVST--HTEEEMTEAVRDGADYV- 134
Query: 138 IMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ P + Q + P + + + SI + GG+ NI +L G +
Sbjct: 135 --GLGPFYPTQSKRDVHAPVTPKVRQFALQLSIPVVAIGGIGKANIGALYAEGFRSFAMI 192
Query: 198 SSFFNQKGEISYAKRLNDLKKSALAID 224
S+ Q + A + L++ A+A+D
Sbjct: 193 SAVVGQ---VQIAAAVQALRQ-AVAVD 215
>gi|240102816|ref|YP_002959125.1| inosine 5'-monophosphate dehydrogenase [Thermococcus gammatolerans
EJ3]
gi|239910370|gb|ACS33261.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
(IMPD) (guaB) [Thermococcus gammatolerans EJ3]
Length = 485
Score = 35.1 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTS---RNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
+ K R+ K + + L V V K+L +AGAD++V+ ++ + K
Sbjct: 202 LAKRRKWKNAVRDENGDLVVAAAVGPFDLERAKALDRAGADVIVIDTA---HAHNLKAIK 258
Query: 212 RLNDLKKSALA 222
+ +++K+ A
Sbjct: 259 AMKEIRKAVDA 269
>gi|168051899|ref|XP_001778390.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670269|gb|EDQ56841.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 745
Score = 35.1 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 156 PKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K+R K L +I++ DG + + G + V GS+ A ND
Sbjct: 587 DKVRIIKELKHHGTIAMVGDG-INDAPALATADVGIAMGVAGSAV--AMETADVALMTND 643
Query: 216 LKKSALAI 223
L+K A A+
Sbjct: 644 LRKLAAAV 651
>gi|332796285|ref|YP_004457785.1| 3-hexulose-6-phosphate synthase [Acidianus hospitalis W1]
gi|332694020|gb|AEE93487.1| 3-hexulose-6-phosphate synthase [Acidianus hospitalis W1]
Length = 225
Score = 35.1 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLV 195
+ I+ ++ G Q+ T+ ++ I + S+ + V GG+ +NI L+ ++ V
Sbjct: 141 VDIIGLHVGLDVQKERGITVTSLKNEIKQISEFSL-VSVAGGLNEKNIVDLLDLPINIYV 199
Query: 196 VGSSFFNQKGEISYAKRLNDL 216
VG + + KRL ++
Sbjct: 200 VGGAITRSSDPLLVTKRLINI 220
>gi|153956238|ref|YP_001397003.1| nicotinate-nucleotide diphosphorylase [Clostridium kluyveri DSM
555]
gi|219856560|ref|YP_002473682.1| hypothetical protein CKR_3217 [Clostridium kluyveri NBRC 12016]
gi|146349096|gb|EDK35632.1| Predicted nicotinate-nucleotide diphosphorylase [Clostridium
kluyveri DSM 555]
gi|219570284|dbj|BAH08268.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 280
Score = 35.1 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 144 GFGGQQLIESTIPKIRQAKALIGK--RSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFF 201
G G Q + K+ + ++I SI + GG+ NI + G + +V +S +
Sbjct: 208 GVDGIQFDKIPYDKLEKNVSIIRNINPSIIILASGGINENNIIEYAKTGVNAIVT-TSIY 266
Query: 202 NQK 204
+ +
Sbjct: 267 HAQ 269
>gi|328956401|ref|YP_004373787.1| thiamine-phosphate pyrophosphorylase [Carnobacterium sp. 17-4]
gi|328672725|gb|AEB28771.1| thiamine-phosphate pyrophosphorylase [Carnobacterium sp. 17-4]
Length = 200
Score = 35.1 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 45/146 (30%), Gaps = 14/146 (9%)
Query: 53 VIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKK 112
V + + + I+ + + D I E L T K
Sbjct: 39 VYEEFARACQKMCLAYQVPFIINDDVELALKLDADGIHIGQEDLA-----LSTFRKQAKG 93
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI----ESTIPKIRQAKALIGKR 168
+ ++ + + ++ D + + P + Q + + ++ +
Sbjct: 94 KIIGVSVHNSREMEQAILSGADYV---GIGPIYKTQSKKDAKPPAGLHFLKAMRKQCS-- 148
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLL 194
+ + GG+T N + +GAD +
Sbjct: 149 NFPIVGIGGITEENASEVRSSGADGV 174
>gi|251812193|ref|ZP_04826666.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
BCM-HMP0060]
gi|251804290|gb|EES56947.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
BCM-HMP0060]
gi|329735641|gb|EGG71924.1| thiamine-phosphate diphosphorylase [Staphylococcus epidermidis
VCU028]
Length = 215
Score = 35.1 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I Q + I + GG+ N++ +V GAD + V S+ K
Sbjct: 157 ISQLRLYI--HDFPIVAIGGINETNVQPIVDEGADGISVISAITRSTNIDKTVK 208
>gi|255730807|ref|XP_002550328.1| pyridoxine biosynthesis protein PDX1 [Candida tropicalis MYA-3404]
gi|240132285|gb|EER31843.1| pyridoxine biosynthesis protein PDX1 [Candida tropicalis MYA-3404]
Length = 343
Score = 35.1 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 35/110 (31%), Gaps = 33/110 (30%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKR--------------------SISLEVD--- 175
M G G + S + IR K I + + ++V
Sbjct: 193 MIRCKGEAGTGDVSSAVDHIRTIKKDIEEASKLKSEKDIVELAEKLRVPVDLLIQVIETK 252
Query: 176 ---------GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GGV T + L+Q G D + VGS F K AK + D
Sbjct: 253 KLPVVLFCAGGVSTPADAALLMQLGCDGVFVGSGIFKAKNPERLAKAIVD 302
>gi|15828834|ref|NP_326194.1| N-acetylmannosamine-6-phosphate 2-epimerase [Mycoplasma pulmonis
UAB CTIP]
gi|29427965|sp|Q98QJ8|NANE_MYCPU RecName: Full=Putative N-acetylmannosamine-6-phosphate 2-epimerase;
AltName: Full=ManNAc-6-P epimerase
gi|14089777|emb|CAC13536.1| N-ACETYLMANNOSAMINE-6-P EPIMERASE [Mycoplasma pulmonis]
Length = 228
Score = 35.1 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSF 200
+RQ + + L +GG +N K + GA+ +VVGS+
Sbjct: 169 LRQVLKICQQNKKYLIAEGGFNSPQNAKDALDIGANAVVVGSAI 212
>gi|312878537|ref|ZP_07738414.1| transposase IS4 family protein [Caldicellulosiruptor lactoaceticus
6A]
gi|311794683|gb|EFR11135.1| transposase IS4 family protein [Caldicellulosiruptor lactoaceticus
6A]
Length = 339
Score = 35.1 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 145 FGGQQLIESTIPKI-RQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVV 196
F G + T+ KI R+ K I + D G+ N+K + +AG D +V
Sbjct: 98 FPGNTIDSKTMVKILRKLKEKFSIDKIIIVADKGLNSRINLKMIKEAGYDYIVA 151
>gi|229587891|ref|YP_002870010.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Pseudomonas
fluorescens SBW25]
gi|259709859|sp|C3K6V2|HIS4_PSEFS RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|229359757|emb|CAY46607.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me thylideneamino]
imidazole-4-carboxamide isomerase [Pseudomonas
fluorescens SBW25]
Length = 245
Score = 35.1 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F GQ + + I + ++ +++ GG+ + I+ V+AG +
Sbjct: 47 LHLVDLNGAFEGQPVNGEVVTAIAK-----RYPNLPIQIGGGIRSLETIEHYVKAGVSYV 101
Query: 195 VVGS-SFFNQKGEISYAKRLNDL 216
++G+ + K A+
Sbjct: 102 IIGTKAV---KDPAFVAEACRAF 121
>gi|255038572|ref|YP_003089193.1| thiamine-phosphate pyrophosphorylase [Dyadobacter fermentans DSM
18053]
gi|254951328|gb|ACT96028.1| thiamine-phosphate pyrophosphorylase [Dyadobacter fermentans DSM
18053]
Length = 224
Score = 35.1 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYA 210
+ ++ A+ L V GG+ N+ + GA+ + VV S+ + A
Sbjct: 151 PWELDGLQWARQQSRHP---LVVIGGLHPENVHDAITNGANGVAVV-SAICSAPSPREAA 206
Query: 211 KRLNDLKKSAL 221
+ L + ++++
Sbjct: 207 QALKSIIQNSI 217
>gi|203288800|ref|YP_002223749.1| inosine-5'-monophosphate dehydrogenase [Borrelia duttonii Ly]
gi|201084351|gb|ACH93938.1| inosine-5'-monophosphate dehydrogenase [Borrelia duttonii Ly]
Length = 483
Score = 35.1 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 10/129 (7%)
Query: 78 INIIADAGCDIITF---HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ + A D+I H S+ + +R I + V D+ID
Sbjct: 237 VEELVKADVDVIVVDSAHGHSTK-VIEIVRKIKSKYPNLDVIAGNIVTKEAAFDLIDAGA 295
Query: 135 MILIMTVNPGFGGQQLIE-----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQ 188
L + + PG I + I +I + DGG+ +I +
Sbjct: 296 DCLKVGIGPGSICTTRIVAGVGVPQLTAINDVFEACKDTNICIIADGGIRFSGDIVKAIA 355
Query: 189 AGADLLVVG 197
AGAD +++G
Sbjct: 356 AGADSVMIG 364
>gi|110640095|ref|YP_680305.1| nicotinate-nucleotide pyrophosphorylase [Cytophaga hutchinsonii
ATCC 33406]
gi|110282776|gb|ABG60962.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Cytophaga
hutchinsonii ATCC 33406]
Length = 301
Score = 35.1 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
+++A ALI + +E GG+ I ++ ++G D + VGS
Sbjct: 247 MKEAVALING-NAEVEASGGINESTIVAVAESGVDYISVGS 286
>gi|332707311|ref|ZP_08427363.1| tryptophan synthase, alpha chain [Lyngbya majuscula 3L]
gi|332353919|gb|EGJ33407.1| tryptophan synthase, alpha chain [Lyngbya majuscula 3L]
Length = 265
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 8/144 (5%)
Query: 77 HINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMI 136
+ IA G + L+ +G + + + P +P +E + +
Sbjct: 113 FLEQIAQVGAKGLVVPDLPLEEAEILLKPAAELGIEVILLVAPTSPTERIEAIAKQSQGF 172
Query: 137 LIMTVNPGFGG--QQLIESTIPKIRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQAGAD 192
+ + G G QL + Q + + K + V G G++ K + GAD
Sbjct: 173 IYLVSVTGVTGMRTQLQSRVKDLLNQMRDVTDKP---IGV-GFGISEPEQAKQVKDWGAD 228
Query: 193 LLVVGSSFFNQKGEISYAKRLNDL 216
++VGS+ + + + ++ L+ +
Sbjct: 229 AVIVGSAIVKRLADGTPSEGLSAI 252
>gi|330941961|gb|EGH44658.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 184
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 99 IRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
+ + A K G+ ++P TP + + D++ + F +Q+ +
Sbjct: 89 PHSDAKVLRAA-KAAGLFLSPGVATPTEAFAALAEGADVLKL------FPAEQMSPAV-- 139
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
++ A++ K +I L V GG++ N+K + AG +GS FN
Sbjct: 140 -VKAWLAVLPKGTILLPV-GGISPDNMKVFLDAGVKGFGLGSGLFN 183
>gi|325103873|ref|YP_004273527.1| inosine-5'-monophosphate dehydrogenase [Pedobacter saltans DSM
12145]
gi|324972721|gb|ADY51705.1| inosine-5'-monophosphate dehydrogenase [Pedobacter saltans DSM
12145]
Length = 489
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 23/178 (12%)
Query: 40 DGCFVPNISFGADVIRSLRSYSDSVFDCHL---------MISSIDSHINIIADAGCDIIT 90
DG I+F I+ R+Y + D H + + + + AG D+IT
Sbjct: 192 DGTLSGLITF--KDIQKFRNYPSACKDEHGRLRVGAAVGVTTDTLERVEALVKAGVDVIT 249
Query: 91 FHPESSPHIRRSLRTIHAMGKKT----GVAINPETPVAILEDVIDEIDMILIMTVNPGF- 145
+ H + + + + K +A N T A + +++ + + + PG
Sbjct: 250 I-DTAHGHSKGVIDKLKEVKAKFPELDVIAGNIATGAAA-KALVEAGADAVKVGIGPGSI 307
Query: 146 GGQQLIE----STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGS 198
++I + + + + + L DGG+ +I + AGA ++ GS
Sbjct: 308 CTTRIIAGVGVPQLYAVYEVAKALKGTGVPLIADGGIKQTGDIAKAIAAGASTIMAGS 365
>gi|312878583|ref|ZP_07738450.1| transposase IS4 family protein [Caldicellulosiruptor lactoaceticus
6A]
gi|311794639|gb|EFR11101.1| transposase IS4 family protein [Caldicellulosiruptor lactoaceticus
6A]
Length = 567
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 145 FGGQQLIESTIPKI-RQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVV 196
F G + T+ KI R+ K I + D G+ N+K + +AG D +V
Sbjct: 240 FPGNTIDSKTMVKILRKLKEKFSIDKIIIVADKGLNSRINLKMIKEAGYDYIVA 293
>gi|12518919|gb|AAG59187.1|AE005631_2 thiamin biosynthesis, thiazole moiety [Escherichia coli O157:H7
str. EDL933]
gi|13364390|dbj|BAB38337.1| thiamin biosynthesis protein ThiG [Escherichia coli O157:H7 str.
Sakai]
gi|209751768|gb|ACI74191.1| thiamin biosynthesis protein ThiG [Escherichia coli]
gi|209751770|gb|ACI74192.1| thiamin biosynthesis protein ThiG [Escherichia coli]
gi|209751772|gb|ACI74193.1| thiamin biosynthesis protein ThiG [Escherichia coli]
gi|209751774|gb|ACI74194.1| thiamin biosynthesis protein ThiG [Escherichia coli]
gi|209751776|gb|ACI74195.1| thiamin biosynthesis protein ThiG [Escherichia coli]
Length = 281
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 123 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 182
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 183 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 237
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 238 PVNMAKAFRLAVEAGL 253
>gi|219668263|ref|YP_002458698.1| modD protein [Desulfitobacterium hafniense DCB-2]
gi|219538523|gb|ACL20262.1| modD protein [Desulfitobacterium hafniense DCB-2]
Length = 285
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
GG+ N++ + G D +V +S F+ K
Sbjct: 243 GGINEANVRDYAETGVDGIVT-TSLFSAK 270
>gi|332704412|ref|ZP_08424500.1| Thiamine-phosphate pyrophosphorylase [Desulfovibrio africanus str.
Walvis Bay]
gi|332554561|gb|EGJ51605.1| Thiamine-phosphate pyrophosphorylase [Desulfovibrio africanus str.
Walvis Bay]
Length = 214
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 140 TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD-LLVVGS 198
+ F Q I +R+ + I + + + GGV N +V AGA+ + VV S
Sbjct: 137 STKTDFSHQPW---GIEGLRRLRPRISRPMVGI---GGVDVGNAARIVSAGAEGVAVV-S 189
Query: 199 SFFNQKGEIS 208
+ +
Sbjct: 190 AICSAPSPKD 199
>gi|291278884|ref|YP_003495719.1| inosine-5'-monophosphate dehydrogenase [Deferribacter desulfuricans
SSM1]
gi|290753586|dbj|BAI79963.1| inosine-5'-monophosphate dehydrogenase [Deferribacter desulfuricans
SSM1]
Length = 488
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 16/138 (11%)
Query: 74 IDSH--INIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILED 128
D++ ++ + + G D+I T H S + +++ I + ED
Sbjct: 227 PDTYERVDALVEKGVDVIVVDTAHG-HSVKVIETVKAIKKKYPDLDLVAGNVATAEACED 285
Query: 129 VIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I + + + PG G + I I + K +I + DGG+
Sbjct: 286 LIKAGADCVKVGIGPGSICTTRVVAGVGV--PQITAIMDCAQVADKYNIPIIADGGIKFS 343
Query: 182 -NIKSLVQAGADLLVVGS 198
+I + AGA ++++GS
Sbjct: 344 GDIVKAIGAGASVVMIGS 361
>gi|15603097|ref|NP_246169.1| pyridoxine biosynthesis protein [Pasteurella multocida subsp.
multocida str. Pm70]
gi|46396503|sp|Q9CLJ6|PDXS_PASMU RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|12721587|gb|AAK03316.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 295
Score = 35.1 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F + +AK +
Sbjct: 214 GGVATPADAALMMELGADGVFVGSGIFKSEHPEKFAKAI 252
>gi|330987420|gb|EGH85523.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 211
Score = 35.1 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 99 IRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
+ + A K G+ ++P TP + + D++ + F +Q+ +
Sbjct: 89 PHSDAKVLRAA-KAAGLFLSPGVATPTEAFAALAEGADVLKL------FPAEQMSPAV-- 139
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
++ A++ K +I L V GG++ N+K + AG +GS F
Sbjct: 140 -VKAWLAVLPKGTILLPV-GGISPDNMKVFLDAGVKGFGLGSGLFK 183
>gi|308273080|emb|CBX29684.1| Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
[uncultured Desulfobacterium sp.]
Length = 275
Score = 35.1 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 20/110 (18%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAIL----EDVIDEIDMILIMTVNPGFGG 147
H + I +++ I + E V+ L E + + D+I++
Sbjct: 165 HIAACGGISKAIERIRDKVSH---LVKIEVEVSDLMGVKEALAAKADIIML--------- 212
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+P+I++A ALI K+++ +E+ GGVT N+ SL+ GAD++ VG
Sbjct: 213 ---DNMDVPQIKEAVALIDKKAV-VEISGGVTRENLGSLIDTGADIVSVG 258
>gi|212637860|ref|YP_002314380.1| pyridoxal biosynthesis lyase PdxS [Anoxybacillus flavithermus WK1]
gi|254781582|sp|B7GFL8|PDXS_ANOFW RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|212559340|gb|ACJ32395.1| Pyridoxine biosynthesis enzyme PDX1/PDX2, synthetase subunit
[Anoxybacillus flavithermus WK1]
Length = 294
Score = 35.1 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++ GAD + VGS F + YA+ +
Sbjct: 213 GGVATPADAALMMHLGADGVFVGSGIFKSENPEKYARAI 251
>gi|256847620|ref|ZP_05553065.1| 3-hexulose-6-phosphate synthase [Lactobacillus coleohominis
101-4-CHN]
gi|256715309|gb|EEU30285.1| 3-hexulose-6-phosphate synthase [Lactobacillus coleohominis
101-4-CHN]
Length = 212
Score = 35.1 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 6/94 (6%)
Query: 124 AILEDVIDE-IDMILIM-TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
++ +D ID ++ + + F GQ E + ++ + + V GGV
Sbjct: 116 ERAQEWLDNGIDQVVYHQSRDAKFAGQTWGEKDLNSVKSLIDM----GFKVSVTGGVKPE 171
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
+K + G + + A +
Sbjct: 172 VLKLFKGLPVYCFIAGRAIHGADDPHAAALEFKN 205
>gi|254303396|ref|ZP_04970754.1| AT family autotransporter [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323588|gb|EDK88838.1| AT family autotransporter [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 3545
Score = 35.1 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 170 ISLEVDGGVTSRNIKSL-VQAGAD---LLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
++L DGG+ N K++ + GA+ + V G S F G I N K+A+ +
Sbjct: 1701 LALYADGGIKLNNAKAINITDGANNVGVFVTGGSTFKNTGSIVSGSASNSSIKNAIGV 1758
>gi|92117236|ref|YP_576965.1| orotidine 5'-phosphate decarboxylase [Nitrobacter hamburgensis X14]
gi|122418010|sp|Q1QMP2|PYRF_NITHX RecName: Full=Orotidine 5'-phosphate decarboxylase; AltName:
Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase
gi|91800130|gb|ABE62505.1| orotidine-5'-phosphate decarboxylase [Nitrobacter hamburgensis X14]
Length = 240
Score = 35.1 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 185 SLVQAGADLLVVGSSFFNQKGEISYAKRL 213
++AGAD LV+G + + A+ +
Sbjct: 201 EAIRAGADYLVLGRPIYAADDPKAAAQAI 229
>gi|78778957|ref|YP_397069.1| tryptophan synthase subunit alpha [Prochlorococcus marinus str. MIT
9312]
gi|78712456|gb|ABB49633.1| tryptophan synthase, alpha chain [Prochlorococcus marinus str. MIT
9312]
Length = 280
Score = 35.1 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 39/97 (40%), Gaps = 8/97 (8%)
Query: 108 AMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQ--QLIESTIPKIRQAKALI 165
+ + P TP ++ + + + G G+ ++ I + K +
Sbjct: 157 NHSMDLILLVAPTTPFERMKQISNHTKGFTYLVSVTGVTGERNKMENRVENLIAKLKEIN 216
Query: 166 GKRSISLEVDG-GV-TSRNIKSLVQAGADLLVVGSSF 200
+ V G G+ T ++ + + GAD +++GS+F
Sbjct: 217 SNP---IAV-GFGISTPEHVNKVREWGADGVIIGSAF 249
>gi|39997293|ref|NP_953244.1| inosine-5'-monophosphate dehydrogenase [Geobacter sulfurreducens
PCA]
gi|39984183|gb|AAR35571.1| inosine-5'-monophosphate dehydrogenase [Geobacter sulfurreducens
PCA]
gi|298506231|gb|ADI84954.1| inosine-5'-monophosphate dehydrogenase [Geobacter sulfurreducens
KN400]
Length = 491
Score = 35.1 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 73 SIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGK-KTG---VAINPETPVAILED 128
+++ ++ + AG D+I + H + L I + G +A N T E
Sbjct: 229 DMEARVDALVKAGVDVIVV-DTAHGHSQGVLDAIRTVKANFPGVELIAGNIATA-EAAEA 286
Query: 129 VIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR 181
+I + + + PG G + I I Q + K + L DGGV
Sbjct: 287 LIKAGVDAIKVGIGPGSICTTRVVAGVGV--PQISAIAQCAKVARKYDVPLIADGGVKYS 344
Query: 182 -NIKSLVQAGADLLVVGS 198
++ V AGAD++++GS
Sbjct: 345 GDVTKAVAAGADVIMIGS 362
>gi|330900419|gb|EGH31838.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 282
Score = 35.1 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLGELQQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ SLE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLDDMREAVRLTAGRA-SLEASGGINDDTLRVIAETGVDYI 262
>gi|327310645|ref|YP_004337542.1| nicotinate phosphoribosyltransferase [Thermoproteus uzoniensis
768-20]
gi|326947124|gb|AEA12230.1| nicotinate phosphoribosyltransferase [Thermoproteus uzoniensis
768-20]
Length = 394
Score = 35.1 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+R A L G + + + V GG+ + L + AD VG+S
Sbjct: 256 VRWALDLAGYKDVKIVVSGGLDEEEVARLAEV-ADAFGVGTSI 297
>gi|258516240|ref|YP_003192462.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum
acetoxidans DSM 771]
gi|257779945|gb|ACV63839.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum
acetoxidans DSM 771]
Length = 485
Score = 35.1 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 14/107 (13%)
Query: 102 SLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPG---------FGGQQLIE 152
+++ I V V D+I + + + PG G I
Sbjct: 260 TVQNIKDKYSDVAVIAGNVATVEGTRDLILAGADAVKVGIGPGSICTTRVVAGIGVPQIT 319
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVVGS 198
+ + + +AK K +I + DGGV +I + AGAD++++GS
Sbjct: 320 AVMDCVSEAK----KHNIPIIADGGVKYSGDIVKAIAAGADVVMIGS 362
>gi|242241498|ref|ZP_04795943.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
W23144]
gi|242235041|gb|EES37352.1| thiamine-phosphate pyrophosphorylase [Staphylococcus epidermidis
W23144]
Length = 213
Score = 35.1 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I Q + I + + GG+ N++ +V GAD + V S+ K
Sbjct: 155 ISQLRLYI--HDVPIVAIGGINETNVQPIVDEGADGISVISAITRSTNIDKTVK 206
>gi|289582466|ref|YP_003480932.1| tryptophan synthase subunit alpha [Natrialba magadii ATCC 43099]
gi|289532019|gb|ADD06370.1| tryptophan synthase, alpha subunit [Natrialba magadii ATCC 43099]
Length = 296
Score = 35.1 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 20/162 (12%)
Query: 73 SIDSHINIIADAGCDIITFH--PESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVI 130
+ + ADAG I P R + + VA P T L+ ++
Sbjct: 116 DVRPFVERAADAGLSGIIVPDLPAEEADPLRDACDDYGLDLVFIVA--PTTAGERLDRIM 173
Query: 131 DEIDMILIMTVNPGFGGQQ--LIESTIPKIRQAKALIGKRSISLEVDGGVTS-RNIKSLV 187
++ + G G + + +T + + +++ GV+ + ++
Sbjct: 174 SQVSGFAYVQARLGTTGARADVSNATHDSLTRLSEYDVPKAVGF----GVSEGDHAAEII 229
Query: 188 QAGADLLVVGSSFFN-----QKGEISYAKRL----NDLKKSA 220
+AGAD ++VGS+ + G+ A L +LK+ A
Sbjct: 230 EAGADGVIVGSALVDIIAEHGTGDAPAADALESKARELKRGA 271
>gi|297203420|ref|ZP_06920817.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Streptomyces sviceus
ATCC 29083]
gi|197717558|gb|EDY61592.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Streptomyces sviceus
ATCC 29083]
Length = 251
Score = 35.1 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAI 223
G+ + L + GAD+ V + ++ +R+ L + A+A+
Sbjct: 24 GIGAATAVRLAREGADVAV--TYVDGKEAASDVVRRVEALGRRAVAL 68
>gi|89054825|ref|YP_510276.1| hypothetical protein Jann_2334 [Jannaschia sp. CCS1]
gi|88864374|gb|ABD55251.1| protein of unknown function DUF847 [Jannaschia sp. CCS1]
Length = 203
Score = 35.1 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
+R + L+ + + VDG + + ++ A
Sbjct: 101 VRILQRLLRDMGLDIAVDGAIGPQTARAAYAA 132
>gi|313897267|ref|ZP_07830811.1| 3-hexulose-6-phosphate synthase [Clostridium sp. HGF2]
gi|312957988|gb|EFR39612.1| 3-hexulose-6-phosphate synthase [Clostridium sp. HGF2]
Length = 212
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 137 LIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVV 196
I+ V+ G Q + ++ K + +S V GG+ + I D+++V
Sbjct: 129 HIIAVHVGADQQAAGREPLEDLKLMKECVKAAGVS--VAGGINGKTISDYTALRPDIVIV 186
Query: 197 GSSFFNQKGEISYAKRL 213
GS + ++ A+++
Sbjct: 187 GSGITHALDPVAEARKI 203
>gi|312622548|ref|YP_004024161.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203015|gb|ADQ46342.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 278
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
T+ ++++A R + +E G + NI+ + + G D++ VGS
Sbjct: 218 FTVDEMKRAVEKAEGR-VLIEASGNINIDNIEEIAKTGVDIISVGS 262
>gi|293366056|ref|ZP_06612744.1| thiamine-phosphate diphosphorylase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319779|gb|EFE60137.1| thiamine-phosphate diphosphorylase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 215
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAK 211
I Q + I + GG+ N++ +V GAD + V S+ K
Sbjct: 157 ISQLRLYI--HDFPIVAIGGINETNVQPIVDEGADGISVISAITRSTNIDKTVK 208
>gi|227485541|ref|ZP_03915857.1| possible 4-hydroxy-2-oxoglutarate aldolase [Anaerococcus
lactolyticus ATCC 51172]
gi|227236540|gb|EEI86555.1| possible 4-hydroxy-2-oxoglutarate aldolase [Anaerococcus
lactolyticus ATCC 51172]
Length = 208
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 25/124 (20%)
Query: 103 LRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAK 162
+ I+ + G TP +LE +D+I +L ++P K
Sbjct: 102 MCNIYNIPYMPG----CITPAEMLEAYKYGVDII------------KLFPGSLPGPSYVK 145
Query: 163 ALIG-KRSISLEVDGGVTSRNIKSLVQAGADLLV-VGSSFFNQ------KGEISYAKRLN 214
A+ G + GGV+ N+K AG + V GS+ K Y +++
Sbjct: 146 AIHGPYPHFQIMPTGGVSLENLKDWFDAGV-VAVGAGSNLVKGSREEITKKAKQYLEKIA 204
Query: 215 DLKK 218
+++K
Sbjct: 205 EIRK 208
>gi|163784278|ref|ZP_02179194.1| orotidine-5'-phosphate decarboxylase [Hydrogenivirga sp.
128-5-R1-1]
gi|159880454|gb|EDP74042.1| orotidine-5'-phosphate decarboxylase [Hydrogenivirga sp.
128-5-R1-1]
Length = 230
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
K V+ GA++L+VG K K++ +
Sbjct: 193 TPKKAVEKGANILIVGRPIIKAKNPNEKIKKIKE 226
>gi|257887640|ref|ZP_05667293.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257896135|ref|ZP_05675788.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257823694|gb|EEV50626.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
gi|257832700|gb|EEV59121.1| conserved hypothetical protein [Enterococcus faecium Com12]
Length = 228
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGF--------GGQQLIESTIPK--IRQAKA 163
GV +N TP+ +++V +D+ +I TV + G +I + K + +
Sbjct: 110 GVVLNGPTPLETVKEVCRVVDIPVISTVTSKYTEIDEKLAAGISIINISAGKETVEAVRH 169
Query: 164 LIGKR-SISLEVDGGVTSRNIKSLVQAGADLL 194
K + + GG T +I +QAGA+ +
Sbjct: 170 FRKKYPELPIIATGGPTEESIAETIQAGANAI 201
>gi|238028407|ref|YP_002912638.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia glumae BGR1]
gi|237877601|gb|ACR29934.1| Nicotinate-nucleotide pyrophosphorylase [Burkholderia glumae BGR1]
Length = 292
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
A+ PV I + + ++D L G L T +R+A + R++ LEV
Sbjct: 198 FALQSGVPVQIEVETLAQLDTALAH----GAKSVLLDNFTFEMMREAVRIASGRAV-LEV 252
Query: 175 DGGVTSRNIKSLVQAGAD 192
GGV + + + G D
Sbjct: 253 SGGVNADTVVEIASTGVD 270
>gi|115352603|ref|YP_774442.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia ambifaria
AMMD]
gi|115282591|gb|ABI88108.1| nicotinate-nucleotide pyrophosphorylase (carboxylating)
[Burkholderia ambifaria AMMD]
Length = 293
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL 172
A++ PV I + + ++D L G L T+ +R+A + +++ L
Sbjct: 197 AAFALDSGVPVQIEVETLAQLDTALAH----GAQSVLLDNFTLDMMREAVRVAAGKAV-L 251
Query: 173 EVDGGVTSRNIKSLVQAGAD 192
EV GGV +++ + G D
Sbjct: 252 EVSGGVNFDTVRTFAETGVD 271
>gi|23097927|ref|NP_691393.1| thiamine phosphate synthase chain B [Oceanobacillus iheyensis
HTE831]
gi|34222881|sp|Q8ESZ3|THIE_OCEIH RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|22776151|dbj|BAC12428.1| thiamine phosphate synthase chain B [Oceanobacillus iheyensis
HTE831]
Length = 206
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFG---- 146
H +R K G++I+ + +D++ + V P F
Sbjct: 88 IHIGQDDQPVEVVRK-QFPNKIIGLSISTNNELNQ-----SPLDLVDYIGVGPIFDTNTK 141
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ I+ K S+ L GG+ + N + ++QAGAD +
Sbjct: 142 EDAKTAVGLEWIQSLKKQ--HPSLPLVAIGGINTTNAQEIIQAGADGV 187
>gi|68468775|ref|XP_721446.1| hypothetical protein CaO19.2947 [Candida albicans SC5314]
gi|68469319|ref|XP_721174.1| hypothetical protein CaO19.10464 [Candida albicans SC5314]
gi|46443082|gb|EAL02366.1| hypothetical protein CaO19.10464 [Candida albicans SC5314]
gi|46443365|gb|EAL02647.1| hypothetical protein CaO19.2947 [Candida albicans SC5314]
Length = 292
Score = 34.8 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 35/108 (32%), Gaps = 33/108 (30%)
Query: 139 MTVNPGFGGQQLIESTIPKIRQAKALIGKRS--------------------ISLEVD--- 175
M G G + S + IR K I + S + ++V
Sbjct: 142 MIRCKGEAGTGDVSSAVDHIRTIKKDIEEASKLKTETEIVELARELRVPTELLIQVIEEK 201
Query: 176 ---------GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + L+Q G D + VGS F K AK +
Sbjct: 202 KLPVVLFCAGGVSTPADAALLMQLGCDGVFVGSGIFKSKNPEKLAKAI 249
>gi|295133820|ref|YP_003584496.1| thiamine-phosphate pyrophosphorylase [Zunongwangia profunda SM-A87]
gi|294981835|gb|ADF52300.1| thiamine-phosphate pyrophosphorylase [Zunongwangia profunda SM-A87]
Length = 215
Score = 34.8 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
I++ + L K I++ G + + N +++AGAD + V S+ K AK +
Sbjct: 151 IKKIRTLTTKPLIAI---GRMDAGNAGEIIKAGADCIAVVSAICASKYPEKTAKNIK 204
>gi|255527243|ref|ZP_05394125.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
gi|296188331|ref|ZP_06856723.1| hypothetical protein CLCAR_3856 [Clostridium carboxidivorans P7]
gi|255509067|gb|EET85425.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
gi|296047457|gb|EFG86899.1| hypothetical protein CLCAR_3856 [Clostridium carboxidivorans P7]
Length = 237
Score = 34.8 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 113 TGVAINPETPVAILEDVIDEIDMILIMTVNPGFGG-QQLIE------------STIPKIR 159
GV +N T ++E + D ID+ +I+TV Q+ IE + +R
Sbjct: 117 MGVVVNSPTSNEVIEAMRDTIDIPIIVTVVSENDDIQKRIEAGTTIINVAAGKRSAEVVR 176
Query: 160 QAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+ + + + GG ++IK ++AGA+ +
Sbjct: 177 KIRKKYPE--FPIIATGGKDEKSIKETIEAGANAI 209
>gi|251794127|ref|YP_003008858.1| pyridoxal biosynthesis lyase PdxS [Paenibacillus sp. JDR-2]
gi|247541753|gb|ACS98771.1| pyridoxine biosynthesis protein [Paenibacillus sp. JDR-2]
Length = 293
Score = 34.8 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F +A+ +
Sbjct: 212 GGVATPSDAALMMELGADGVFVGSGIFKSDSPEKFARAI 250
>gi|302185872|ref|ZP_07262545.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
syringae 642]
Length = 282
Score = 34.8 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLGELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ SLE GG+ ++ + + G D +
Sbjct: 213 GVDIIMLDELSLDDMREAVRLTAGRA-SLEASGGINDDTLRVIAETGVDYI 262
>gi|253690057|ref|YP_003019247.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756635|gb|ACT14711.1| 3-dehydro-L-gulonate-6-phosphate decarboxylase [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 218
Score = 34.8 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
GQ + + ++ L I L + GG+T ++ + G + +
Sbjct: 146 GQTWGQQDLDTMKALSDL----GIELSITGGITPSDLPLFSDIAVTAFIAGRALADAPDP 201
Query: 207 ISYAKRLND 215
+ A++
Sbjct: 202 VDSARQFRA 210
>gi|37522400|ref|NP_925777.1| hypothetical protein gll2831 [Gloeobacter violaceus PCC 7421]
gi|35213401|dbj|BAC90772.1| gll2831 [Gloeobacter violaceus PCC 7421]
Length = 555
Score = 34.8 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 129 VIDEIDMILIMTVNPGFGGQQLIE---STIPKIRQAKALIGK-----RSISLEVDGGVTS 180
+ +++ M +TV GG +P I + I + R + + GG+ +
Sbjct: 255 LAEQVPMCDDLTVEADSGGHTDNRPLVCLLPAIIALRDEIQERFGYTRPVRVGAAGGIGT 314
Query: 181 RNIKSLVQA-GADLLVVGS 198
+ A GA +V GS
Sbjct: 315 PHAVQAAFAMGAAYVVTGS 333
>gi|22297609|ref|NP_680856.1| thiazole synthase [Thermosynechococcus elongatus BP-1]
gi|32130222|sp|Q8DMP6|THIG_THEEB RecName: Full=Thiazole synthase
gi|22293786|dbj|BAC07618.1| thiamine biosynthesis protein [Thermosynechococcus elongatus BP-1]
Length = 277
Score = 34.8 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 114 GVAINPETPVAILEDV-IDEIDMILIM-TVNPGFGGQQLIESTIPKIRQAKALIGKRSIS 171
G A+ P L ++E+ + +M +P GQ L + +I +I + S+
Sbjct: 144 GFAVLPYINADPLLAKRLEEVGCVTVMPLASPIGSGQGLRNAANIQI-----IIEQASVP 198
Query: 172 LEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
+ VD G+ T + ++ GAD L++ ++ + AK + L +A
Sbjct: 199 VVVDAGIGTPSEAAAAMELGADALLINTAIAEAGNAPAMAKAM-ALATTA 247
>gi|330991007|ref|ZP_08314961.1| Thiamine-phosphate pyrophosphorylase [Gluconacetobacter sp. SXCC-1]
gi|329761828|gb|EGG78318.1| Thiamine-phosphate pyrophosphorylase [Gluconacetobacter sp. SXCC-1]
Length = 211
Score = 34.8 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 170 ISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSALAID 224
+ + GG+T N +LV+AGAD L V S+ ++ + + + A +
Sbjct: 157 LPVVAIGGITPDNCGTLVRAGADFLSVISAVWSHPDGPGAG--VRAMNTAIAAAE 209
>gi|317496747|ref|ZP_07955077.1| thiamine-phosphate pyrophosphorylase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895759|gb|EFV17911.1| thiamine-phosphate pyrophosphorylase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 213
Score = 34.8 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%)
Query: 159 RQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKK 218
+ K + I + GG+ NIK+L D + V S+ F K K+L L +
Sbjct: 149 EEIKKICHTVEIPVVAIGGIKKENIKTLEGTDVDGVAVVSAIFAAKDIKKDTKQLRSLVE 208
>gi|301059246|ref|ZP_07200181.1| glycosyltransferase, group 2 family protein [delta proteobacterium
NaphS2]
gi|300446640|gb|EFK10470.1| glycosyltransferase, group 2 family protein [delta proteobacterium
NaphS2]
Length = 707
Score = 34.8 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 172 LEVDGGVTSRNIKSLVQAGADLLV 195
+ +DGG + R K V+AGA +LV
Sbjct: 500 IVIDGGSSDRTRKRAVEAGARVLV 523
>gi|262276731|ref|ZP_06054524.1| tryptophan synthase, alpha subunit [alpha proteobacterium HIMB114]
gi|262223834|gb|EEY74293.1| tryptophan synthase, alpha subunit [alpha proteobacterium HIMB114]
Length = 265
Score = 34.8 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI-D 134
+ IN D + P + + P T L+ ++ + D
Sbjct: 112 NFINQCKKNKVDGLIVVDLPWPENKNFAAKCKKKSINFIQLVAPTTSNERLKKIVRDSHD 171
Query: 135 MILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISL-EVDG-GVTSRNIKSLVQAGAD 192
M+ +++ GG+ ++ KI Q I K + + V G G+T + I SL +A D
Sbjct: 172 MVYYISMLSTTGGK--LKVAPKKIIQNYQKIKKLNKNKNVVIGFGITEKTIASLKKA--D 227
Query: 193 LLVVGSSF 200
LVVGS+
Sbjct: 228 GLVVGSAL 235
>gi|212213372|ref|YP_002304308.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Coxiella
burnetii CbuG_Q212]
gi|212011782|gb|ACJ19163.1| nicotinate-nucleotide pyrophosphorylase (carboxylating) [Coxiella
burnetii CbuG_Q212]
Length = 274
Score = 34.8 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 13/106 (12%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H S + ++++ A + + I E + E + + D+IL+
Sbjct: 166 HILSCGSLTQAIQKARASHPEKTLEIEVENLNELQEALAAKADIILL---------DNFD 216
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
TI K + I LE+ G V I + + G D + VG
Sbjct: 217 IDTIKKAVK----INNSQAKLEISGNVNLETIYEIAKTGVDYISVG 258
>gi|16759142|ref|NP_454759.1| quinolinate phosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29140692|ref|NP_804034.1| quinolinate phosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213052267|ref|ZP_03345145.1| quinolinate phosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213582390|ref|ZP_03364216.1| quinolinate phosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213618717|ref|ZP_03372543.1| quinolinate phosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648172|ref|ZP_03378225.1| quinolinate phosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213857636|ref|ZP_03384607.1| quinolinate phosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289823715|ref|ZP_06543327.1| quinolinate phosphoribosyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25324575|pir||AH0520 nicotinate-nucleotide pyrophosphorylase [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501432|emb|CAD01304.1| nicotinate-nucleotide pyrophosphorylase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29136316|gb|AAO67883.1| nicotinate-nucleotide pyrophosphorylase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 297
Score = 34.8 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
++P+ PV + + +DE+D L G L ++R+A + ++ LEV G
Sbjct: 206 LHPDVPVEVEVENLDELDDAL----KAGADIIMLDNFNTDQMREAVKHVNGQA-RLEVSG 260
Query: 177 GVTSRNIKSLVQAGADLLVVG 197
VT+ ++ + G D + VG
Sbjct: 261 NVTAETLREFAETGVDFISVG 281
>gi|218883788|ref|YP_002428170.1| Orotidine-5'-phosphate decarboxylase, PyrF [Desulfurococcus
kamchatkensis 1221n]
gi|218765404|gb|ACL10803.1| Orotidine-5'-phosphate decarboxylase, PyrF [Desulfurococcus
kamchatkensis 1221n]
Length = 224
Score = 34.8 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 61/169 (36%), Gaps = 7/169 (4%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSH----INIIADAGCDIITFHPESSPHIRRSLRTIHAM 109
IR LR ++ L ++ I + +A+ G + + H + +M
Sbjct: 47 IRRLRRLTEKPIIADLKLADIGDIMSTTVKHLANTGVNAVIAHAFVGYNGALETLVKTSM 106
Query: 110 GKKTGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKR 168
GV + + ID ID L + V G G + IR A+ +G
Sbjct: 107 VTGIGVILVASMSHDGSREFIDKHIDEFLDLAVKAGVEGIVAPATRPNVIRYARERLGG- 165
Query: 169 SISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
SI + G G+ S + GA+ +VG K A+ + ++
Sbjct: 166 SIKIYSPGIGIQGAEPGSALCVGANYEIVGRLITGSKNPGEAAREVREI 214
>gi|312877032|ref|ZP_07737005.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796173|gb|EFR12529.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 278
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
T+ ++++A R + +E G + NI+ + + G D++ VGS
Sbjct: 218 FTVDEMKKAVEKAEGR-VLIEASGNINIDNIEEIAKTGVDIISVGS 262
>gi|312793393|ref|YP_004026316.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180533|gb|ADQ40703.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 278
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
T+ ++++A R + +E G + NI+ + + G D++ VGS
Sbjct: 218 FTVDEMKKAVEKAEGR-VLIEASGNINIDNIEEIAKTGVDIISVGS 262
>gi|304405788|ref|ZP_07387446.1| nicotinate-nucleotide pyrophosphorylase [Paenibacillus
curdlanolyticus YK9]
gi|304345031|gb|EFM10867.1| nicotinate-nucleotide pyrophosphorylase [Paenibacillus
curdlanolyticus YK9]
Length = 287
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG--SSFFNQKG 205
+E +++ KA+ R + E GGVT ++ + + G D++ VG + F
Sbjct: 219 LEQMTEAVQRVKAM--ARHVITEASGGVTLDTVRGIAETGVDVISVGGLTYSFQALD 273
>gi|284174450|ref|ZP_06388419.1| geranylgeranylglyceryl phosphate synthase-like protein [Sulfolobus
solfataricus 98/2]
Length = 242
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ I I+ A SI L V GG+ + LV+AGAD++V G+ +
Sbjct: 179 PIRPEMISFIKNA------SSIPLIVGGGIRSVEVALKLVEAGADIIVTGNII--ESDVN 230
Query: 208 SYAKRLNDLKK 218
K + +K
Sbjct: 231 KAIKIIRGIKN 241
>gi|260430795|ref|ZP_05784767.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Silicibacter
lacuscaerulensis ITI-1157]
gi|260418236|gb|EEX11494.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Silicibacter
lacuscaerulensis ITI-1157]
Length = 201
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
GG N ++AGAD +GS+ F +
Sbjct: 151 GGAGPENFGDWLKAGADGFGIGSALFKPGMSVDQIAE 187
>gi|209396837|ref|YP_002273506.1| thiazole biosynthesis protein ThiG [Escherichia coli O157:H7 str.
EC4115]
gi|217326435|ref|ZP_03442519.1| thiazole biosynthesis protein ThiG [Escherichia coli O157:H7 str.
TW14588]
gi|209158237|gb|ACI35670.1| thiazole biosynthesis protein ThiG [Escherichia coli O157:H7 str.
EC4115]
gi|217322656|gb|EEC31080.1| thiazole biosynthesis protein ThiG [Escherichia coli O157:H7 str.
TW14588]
Length = 271
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 113 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 172
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 173 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 227
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 228 PVNMAKAFRLAVEAGL 243
>gi|170683844|ref|YP_001746374.1| thiazole synthase [Escherichia coli SMS-3-5]
gi|170521562|gb|ACB19740.1| thiazole biosynthesis protein ThiG [Escherichia coli SMS-3-5]
Length = 271
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 113 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 172
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 173 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 227
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 228 PVNMAKAFRLAVEAGL 243
>gi|138893690|ref|YP_001124143.1| pyridoxal biosynthesis lyase PdxS [Geobacillus thermodenitrificans
NG80-2]
gi|196251174|ref|ZP_03149850.1| pyridoxine biosynthesis protein [Geobacillus sp. G11MC16]
gi|166980419|sp|A4IJ94|PDXS_GEOTN RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|134265203|gb|ABO65398.1| Pyridoxine biosynthesis protein [Geobacillus thermodenitrificans
NG80-2]
gi|196209315|gb|EDY04098.1| pyridoxine biosynthesis protein [Geobacillus sp. G11MC16]
Length = 294
Score = 34.8 bits (79), Expect = 8.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++ GAD + VGS F + YA+ +
Sbjct: 213 GGVATPADAALMMHLGADGVFVGSGIFKSENPEKYARAI 251
>gi|289672241|ref|ZP_06493131.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Pseudomonas syringae
pv. syringae FF5]
Length = 183
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F GQ + + I + ++ +++ GG+ + I+ V+AG +
Sbjct: 47 LHLVDLNGAFEGQPVNGDVVTAIAR-----RYPNLPIQIGGGIRSLETIEHYVKAGVSYV 101
Query: 195 VVGS 198
++G+
Sbjct: 102 IIGT 105
>gi|294921499|ref|XP_002778676.1| Pyridoxin biosynthesis protein PDX1, putative [Perkinsus marinus
ATCC 50983]
gi|239887393|gb|EER10471.1| Pyridoxin biosynthesis protein PDX1, putative [Perkinsus marinus
ATCC 50983]
Length = 168
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +Q G D + VGS F A+ +
Sbjct: 69 GGVATPADAALCMQLGVDGVFVGSGIFKSDNPEKRARAI 107
>gi|156339198|ref|XP_001620109.1| hypothetical protein NEMVEDRAFT_v1g223466 [Nematostella vectensis]
gi|156204496|gb|EDO28009.1| predicted protein [Nematostella vectensis]
Length = 802
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 136 ILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLL 194
+ ++ +N F GQ + + I + + +++ GG+ + I+ V+AG +
Sbjct: 339 LHLVDLNGAFEGQPVNGEVVTAIAK-----RYPHLPIQIGGGIRSLETIEHYVKAGVSYV 393
Query: 195 VVGS 198
++G+
Sbjct: 394 IIGT 397
>gi|15897204|ref|NP_341809.1| geranylgeranylglyceryl phosphate synthase-like protein [Sulfolobus
solfataricus P2]
gi|31563211|sp|Q980N1|GGGPS_SULSO RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|13813399|gb|AAK40599.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
Length = 255
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEI 207
+ I I+ A SI L V GG+ + LV+AGAD++V G+ +
Sbjct: 192 PIRPEMISFIKNA------SSIPLIVGGGIRSVEVALKLVEAGADIIVTGNII--ESDVN 243
Query: 208 SYAKRLNDLKK 218
K + +K
Sbjct: 244 KAIKIIRGIKN 254
>gi|325276224|ref|ZP_08142023.1| thiamine-phosphate pyrophosphorylase [Pseudomonas sp. TJI-51]
gi|324098653|gb|EGB96700.1| thiamine-phosphate pyrophosphorylase [Pseudomonas sp. TJI-51]
Length = 54
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
S+ + V GG+T N LV GADLL V F +R
Sbjct: 1 SLPIAVIGGITLDNAAPLVAHGADLLAVIHGLFGADSAQEVTRRARAF 48
>gi|315304207|ref|ZP_07874574.1| pyridoxine biosynthesis protein [Listeria ivanovii FSL F6-596]
gi|313627419|gb|EFR96185.1| pyridoxine biosynthesis protein [Listeria ivanovii FSL F6-596]
Length = 295
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F +A +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSDNPAKFANAI 252
>gi|289435452|ref|YP_003465324.1| pyridoxine biosynthesis protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289171696|emb|CBH28242.1| pyridoxine biosynthesis protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|313632398|gb|EFR99427.1| pyridoxine biosynthesis protein [Listeria seeligeri FSL N1-067]
gi|313636921|gb|EFS02522.1| pyridoxine biosynthesis protein [Listeria seeligeri FSL S4-171]
Length = 295
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + +++ GAD + VGS F +A +
Sbjct: 214 GGIATPADAALMMELGADGVFVGSGIFKSDNPAKFANAI 252
>gi|253700524|ref|YP_003021713.1| nicotinate-nucleotide pyrophosphorylase [Geobacter sp. M21]
gi|251775374|gb|ACT17955.1| nicotinate-nucleotide pyrophosphorylase [Geobacter sp. M21]
Length = 276
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 155 IPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+ ++ +A LIGKR++ +E GGV + I+S+ Q G D++ VG
Sbjct: 217 LEEMTKAVQLIGKRAL-VEASGGVNLQTIRSIAQTGVDIISVG 258
>gi|154487442|ref|ZP_02028849.1| hypothetical protein BIFADO_01294 [Bifidobacterium adolescentis
L2-32]
gi|154083960|gb|EDN83005.1| hypothetical protein BIFADO_01294 [Bifidobacterium adolescentis
L2-32]
Length = 289
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV----DGGVTSRNIKSLV 187
DM++++ + +E+ I K+ L R ++ V +GG++ +++
Sbjct: 197 HGDMVIVL-HQDATKTWEQLETGIAKLSDTC-LKDGRPRTIYVLVGPEGGISDAEVEAFT 254
Query: 188 QAGADLLVVGSSFFNQ 203
+AGA++ V+GS+
Sbjct: 255 KAGAEVCVLGSNILRA 270
>gi|88603251|ref|YP_503429.1| radical SAM family protein [Methanospirillum hungatei JF-1]
gi|88188713|gb|ABD41710.1| Radical SAM [Methanospirillum hungatei JF-1]
Length = 565
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 37/115 (32%), Gaps = 12/115 (10%)
Query: 64 VFDCHLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPV 123
D M + T E+ + R R +HA G G A N
Sbjct: 96 PTDVLRMARDNACIGAVFCLNEP---TVSLET---VARVARELHAAGLSMGCASNGCMSE 149
Query: 124 AILEDVIDEIDMILIMTVNPGFGGQQLI----ESTIPKIRQAKALIGKRSISLEV 174
L+ ++D +D I I G Q ++ Q I R+I LEV
Sbjct: 150 KALDVLLDHMDFITI--GLKGLSDQAYQINGAPCNAEQVFQTLKTIHSRNIHLEV 202
>gi|15921490|ref|NP_377159.1| indole-3-glycerol-phosphate synthase [Sulfolobus tokodaii str. 7]
gi|21363065|sp|Q972A1|TRPC_SULTO RecName: Full=Indole-3-glycerol phosphate synthase; Short=IGPS
gi|15622276|dbj|BAB66268.1| 246aa long hypothetical indole-3-glycerol phosphate synthase
[Sulfolobus tokodaii str. 7]
Length = 246
Score = 34.8 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 23/206 (11%)
Query: 8 VPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDC 67
PS L + L E + + + GA I + F + S + +
Sbjct: 54 SPSGLNEN-RDLEEYVKFMEENGAIGISVLTEEKYFGGSYS----DLENAAKIVKIPILM 108
Query: 68 HLMISSIDSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILE 127
I + + I+ + G D I + R L ++ + G+ +
Sbjct: 109 KDFIVT-EKQIDTAFNLGADAILLIVKILT--ERELINLYEYARNLGL--------EAIV 157
Query: 128 DVIDEIDMILIM-----TVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSR 181
+V DE D+ + + + +E I R+ +I I + + G+
Sbjct: 158 EVTDENDLKIALMYDFNIIGVNARNLSSLEVNIRNARKILEMIPNDRIKI-AESGIKNKE 216
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEI 207
+I L + GAD ++G++ +I
Sbjct: 217 DIIELKKYGADAFLIGTTLMKDPNKI 242
>gi|332157951|ref|YP_004423230.1| N-(5'-phosphoribosyl)anthranilate isomerase [Pyrococcus sp. NA2]
gi|331033414|gb|AEC51226.1| N-(5'-phosphoribosyl)anthranilate isomerase [Pyrococcus sp. NA2]
Length = 209
Score = 34.8 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 25/132 (18%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVID--- 131
+ +I + + H + SP + L++ G A T E+ +
Sbjct: 63 EEWAKVIEETEAKYVQVHSDVSPEVIERLKS--EYGVFIMKAFKVPTTSEEPEEYAERLI 120
Query: 132 ------EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKS 185
++D +L+ + G G ++ + I +I R I + + GG+ N++
Sbjct: 121 SKISEYDVDRVLL---DTGAGTGRMHDLRISRIIA-------RKIPIVIAGGLNPENVRR 170
Query: 186 LVQ----AGADL 193
+++ G D+
Sbjct: 171 VIEFVRPFGVDV 182
>gi|288554617|ref|YP_003426552.1| pyridoxal biosynthesis lyase PdxS [Bacillus pseudofirmus OF4]
gi|288545777|gb|ADC49660.1| pyridoxal biosynthesis lyase PdxS [Bacillus pseudofirmus OF4]
Length = 294
Score = 34.8 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GG+ T + ++Q GAD + VGS F +A+ +
Sbjct: 213 GGIATPADAALMMQLGADGVFVGSGIFKSDNPEKFARAI 251
>gi|268610603|ref|ZP_06144330.1| thiamine-phosphate pyrophosphorylase [Ruminococcus flavefaciens
FD-1]
Length = 204
Score = 34.8 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 7/124 (5%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H + +R I G T + D + + V P +
Sbjct: 86 VHVGIEDAPVKEIRRIAGRNFIIGATAK--TVEQAKLAEAEGADYLGVGAVFPSPTKKNA 143
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISY 209
+ T K+R+ + ++++ GG++ N+ + G A + VV S+ F
Sbjct: 144 VRITPEKLREICDSVKIPAVAI---GGISHENVHEIDGCGQAGIAVV-SAIFAADNIKKA 199
Query: 210 AKRL 213
A+ L
Sbjct: 200 AEEL 203
>gi|229148773|ref|ZP_04277023.1| Thiamine-phosphate pyrophosphorylase [Bacillus cereus m1550]
gi|228634781|gb|EEK91360.1| Thiamine-phosphate pyrophosphorylase [Bacillus cereus m1550]
Length = 219
Score = 34.8 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGADLL-VVGSSF 200
++ + GG+T N ++++AGAD + VV S+
Sbjct: 167 TVPIVGIGGITIENTAAVIEAGADGISVV-SAI 198
>gi|220904675|ref|YP_002479987.1| orotidine 5'-phosphate decarboxylase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868974|gb|ACL49309.1| orotidine 5'-phosphate decarboxylase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 235
Score = 34.8 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
V AGAD LVVG + AK++ SA
Sbjct: 196 TPAQAVAAGADYLVVGRPIIAAPDPLMAAKQILAEMASA 234
>gi|75909426|ref|YP_323722.1| thiazole synthase [Anabaena variabilis ATCC 29413]
gi|115305844|sp|Q3M859|THIOG_ANAVT RecName: Full=Bifunctional protein thiO/thiG; Includes: RecName:
Full=Probable FAD-dependent glycine oxidase; Includes:
RecName: Full=Thiazole synthase
gi|75703151|gb|ABA22827.1| thiazole-phosphate synthase [Anabaena variabilis ATCC 29413]
Length = 652
Score = 34.8 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 7/120 (5%)
Query: 97 PHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIM-TVNPGFGGQQLIESTI 155
P +L+ + K+ + +L ++++ +M +P GQ L +
Sbjct: 506 PDPIGTLQAAEQLVKEGFAVLPYINADPMLAKRLEDVGCATVMPLASPIGSGQGLKTTAN 565
Query: 156 PKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+I +I I + VD G+ ++ GAD L++ S+ + + A+ +N
Sbjct: 566 IQI-----IIENAKIPVVVDAGIGAPSEASQAMELGADALLINSAIALAQNPAAMAQAMN 620
>gi|21243410|ref|NP_642992.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas axonopodis pv.
citri str. 306]
gi|21108960|gb|AAM37528.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 287
Score = 34.8 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + ++ A + + + ET + L + + +I I+ +
Sbjct: 169 HIRAAGSLSAAVHAARARQPQLPLVVEVET-LEQLHEAL-QIGCTRILIDDFD------Q 220
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+R AL +R I LEV G V I+++ + G D +
Sbjct: 221 PMRREAVRIVGALPPERRIPLEVSGSVDLAGIRAIAEDGVDCI 263
>gi|320100764|ref|YP_004176356.1| orotidine 5'-phosphate decarboxylase [Desulfurococcus mucosus DSM
2162]
gi|319753116|gb|ADV64874.1| orotidine 5'-phosphate decarboxylase [Desulfurococcus mucosus DSM
2162]
Length = 224
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 64/170 (37%), Gaps = 9/170 (5%)
Query: 54 IRSLRSYSDSVFDCHLMISSIDSHINI----IADAGCDIITFHPESSPHIRRSLRTIHAM 109
IR LR ++ L ++ I + +A G D + H + + +M
Sbjct: 47 IRELRKSTEKPIIVDLKLADIGDVMAEVLRHLARLGVDAVIAHAFTGYTGALEDLSKASM 106
Query: 110 GKKTGVAINPETPVAILEDVID-EIDMILIMTVNPGFGGQQLIESTIPK-IRQAKALIGK 167
G+ I E+ ID +D L + G + +T P+ IR + ++G
Sbjct: 107 ATGVGLIIVVSMSHRGSEEYIDRHVDEFLELAARIRAKG-VVAPATRPRVIRHVREVLGD 165
Query: 168 RSISLEVDG-GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
++ + G G+ S + AGA+ +VG A+ + ++
Sbjct: 166 -TVEIYSPGIGIQGAEPGSALCAGANYEIVGRLITRSGNPGETARAIREM 214
>gi|289665198|ref|ZP_06486779.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 295
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 8/103 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + ++ A + + ET + L + + ++ I+ + Q +
Sbjct: 177 HIRAAGSLSAAVHAARAQQPLLPLVVEVET-LEQLHEAL-QVGCTRILIDDFD---QAMR 231
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+R AL +R I LEV G V I+++ + G D +
Sbjct: 232 REA---VRIVAALPHERRIPLEVSGSVDLAGIRAIAEDGVDCI 271
>gi|288932542|ref|YP_003436602.1| Orotidine 5'-phosphate decarboxylase [Ferroglobus placidus DSM
10642]
gi|288894790|gb|ADC66327.1| Orotidine 5'-phosphate decarboxylase [Ferroglobus placidus DSM
10642]
Length = 433
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ + + V GA +++VGS+ + I A+R+ +
Sbjct: 169 GGLDAEKAANCVALGAKIVIVGSNIVKSRNVIESARRVRE 208
>gi|167763010|ref|ZP_02435137.1| hypothetical protein BACSTE_01375 [Bacteroides stercoris ATCC
43183]
gi|167699350|gb|EDS15929.1| hypothetical protein BACSTE_01375 [Bacteroides stercoris ATCC
43183]
Length = 217
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 37/207 (17%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI 80
+ + G + I + D + A+V + Y D H+ +
Sbjct: 18 DSARMALEGGCRWIQLRMKDAAENEILPVAAEVRKLCNDYGAIFII--------DDHVEL 69
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT 140
+ + D H + R I G N T + + +D ++ I
Sbjct: 70 VKEIRADG--VHLGKNDMPVAEARRILGEEYIIGGTAN--TYEDVKKHWLDGVNYI---- 121
Query: 141 VNPGFGGQQLIESTIPK--------------IRQAKALIGKRSISLEVDGGVTSRNIKSL 186
G G +T + IRQ +A ++ + GG+T +I S+
Sbjct: 122 ---GCG--PFRYTTTKQKLSPILGLEGYKEIIRQMRA--DNINLPIIAIGGITFADIPSV 174
Query: 187 VQAGADLLVVGSSFFNQKGEISYAKRL 213
+Q G + + + + +R+
Sbjct: 175 MQTGVTGIALSGTVLRADNPVEEMQRI 201
>gi|78212164|ref|YP_380943.1| N-acetylmannosamine-6-phosphate 2-epimerase [Synechococcus sp.
CC9605]
gi|78196623|gb|ABB34388.1| N-acylglucosamine-6-phosphate 2-epimerase [Synechococcus sp.
CC9605]
Length = 229
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGSSF 200
+ Q +A + S+ L +GG+ + + + +QAGAD +VVG++
Sbjct: 165 PPAFDLLPQLRAELPS-SVRLICEGGIASPADARLALQAGADTVVVGTAI 213
>gi|56418546|ref|YP_145864.1| pyridoxal biosynthesis lyase PdxS [Geobacillus kaustophilus HTA426]
gi|261417511|ref|YP_003251193.1| pyridoxal biosynthesis lyase PdxS [Geobacillus sp. Y412MC61]
gi|297528387|ref|YP_003669662.1| pyridoxine biosynthesis protein [Geobacillus sp. C56-T3]
gi|319765169|ref|YP_004130670.1| pyridoxine biosynthesis protein [Geobacillus sp. Y412MC52]
gi|68565688|sp|Q5L3Y2|PDXS_GEOKA RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|56378388|dbj|BAD74296.1| superoxide-inducible protein (protein required for pyridoxine
synthesis) [Geobacillus kaustophilus HTA426]
gi|219814384|gb|ACL36468.1| pyridoxal 5'-phosphate synthase unit [Geobacillus sp. H6a]
gi|261373968|gb|ACX76711.1| pyridoxine biosynthesis protein [Geobacillus sp. Y412MC61]
gi|297251639|gb|ADI25085.1| pyridoxine biosynthesis protein [Geobacillus sp. C56-T3]
gi|317110035|gb|ADU92527.1| pyridoxine biosynthesis protein [Geobacillus sp. Y412MC52]
Length = 294
Score = 34.8 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++ GAD + VGS F + YA+ +
Sbjct: 213 GGVATPADAALMMHLGADGVFVGSGIFKSENPEKYARAI 251
>gi|260892283|ref|YP_003238380.1| orotidine 5'-phosphate decarboxylase [Ammonifex degensii KC4]
gi|260864424|gb|ACX51530.1| orotidine 5'-phosphate decarboxylase [Ammonifex degensii KC4]
Length = 239
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 182 NIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
++AGADLLVVG ++ A +
Sbjct: 193 TAAEALRAGADLLVVGRPIVASPDPLAAALAIR 225
>gi|78777737|ref|YP_394052.1| putative molybdenum utilization protein ModD [Sulfurimonas
denitrificans DSM 1251]
gi|78498277|gb|ABB44817.1| Putative molybdenum utilization protein ModD [Sulfurimonas
denitrificans DSM 1251]
Length = 288
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 149 QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
++ T+ K K + L GG+ NI + G D +V S
Sbjct: 224 KMEYETLKKCITLKEQY--PHLLLSATGGINESNIAEFAKCGVDFIVTSS 271
>gi|20089116|ref|NP_615191.1| 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase [Methanosarcina
acetivorans C2A]
gi|22095764|sp|Q8TU55|HIS4_METAC RecName: Full=1-(5-phosphoribosyl)-5-[(5-
phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase; AltName:
Full=Phosphoribosylformimino-5-aminoimidazole
carboxamide ribotide isomerase
gi|19913982|gb|AAM03671.1| N-(5-phospho-D-ribosylformimino)-5-amino-1-(5-phosphoribosyl)-4-
imidazole carboxamide isomerase [Methanosarcina
acetivorans C2A]
Length = 245
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 122 PVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-T 179
P+A+ D I + + ++ ++ G++ I KI QA ++ +S++V GG+ +
Sbjct: 34 PLAVALDWIGKGAKTLHLVDLDGAIEGERKNAPIIEKIVQA---CREKGVSIQVGGGIRS 90
Query: 180 SRNIKSLVQAGADLLVVGSS 199
+ SL++ G +++G++
Sbjct: 91 FEDAASLLELGVSRIILGTA 110
>gi|296537300|ref|ZP_06899180.1| thiamine-phosphate diphosphorylase [Roseomonas cervicalis ATCC
49957]
gi|296262372|gb|EFH09117.1| thiamine-phosphate diphosphorylase [Roseomonas cervicalis ATCC
49957]
Length = 223
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 163 ALIGKRSISLEVDGGVTSRNIKSLVQAGADLL-VVGSSFFNQKGEISYAKR 212
+ S+++ GG+T+ N LV+AGAD L VVG + +N + R
Sbjct: 168 EMFELPSVAI---GGITAANCAPLVRAGADFLAVVG-AVWNHPEGPAAGVR 214
>gi|295704451|ref|YP_003597526.1| pyridoxine biosynthesis protein [Bacillus megaterium DSM 319]
gi|294802110|gb|ADF39176.1| pyridoxine biosynthesis protein [Bacillus megaterium DSM 319]
Length = 294
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +A+ +
Sbjct: 213 GGVATPADAALMMQLGADGVFVGSGIFKSDNPEKFARAI 251
>gi|227873609|ref|ZP_03991847.1| thiamine-phosphate diphosphorylase [Oribacterium sinus F0268]
gi|227840527|gb|EEJ50919.1| thiamine-phosphate diphosphorylase [Oribacterium sinus F0268]
Length = 220
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAG-ADLLVVGSSFFNQKGEISYAKRLND 215
KA+ + + GG++ N+ L +G A + V+ S+ F + L
Sbjct: 154 LKAICEAVDLPVVAIGGISRENVMELKDSGIAGIAVI-SAIFAKPDIEGATADLRK 208
>gi|270308858|ref|YP_003330916.1| metallophosphoesterase [Dehalococcoides sp. VS]
gi|270154750|gb|ACZ62588.1| metallophosphoesterase [Dehalococcoides sp. VS]
Length = 256
Score = 34.8 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 177 GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKR 212
G+T + L+ AGAD++ G+ + + + +
Sbjct: 46 GITPATAQDLISAGADVITTGNHVWKHRDIATVMEE 81
>gi|238760529|ref|ZP_04621663.1| Nicotinate-nucleotide pyrophosphorylase [carboxylating] [Yersinia
aldovae ATCC 35236]
gi|238701245|gb|EEP93828.1| Nicotinate-nucleotide pyrophosphorylase [carboxylating] [Yersinia
aldovae ATCC 35236]
Length = 302
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 106 IHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALI 165
I K I+ + PV + + +DE+ L + G L TIP +R A +
Sbjct: 195 IKDAVAKA-FWIHADVPVEVEVESLDELQQAL----DAGADIVMLDNFTIPMMRDAVKMR 249
Query: 166 GKR-----SISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+R S LEV G VT ++S + G D + VG
Sbjct: 250 DERTKTQGSAQLEVSGNVTLETLRSYAETGIDFISVG 286
>gi|254172123|ref|ZP_04878799.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Thermococcus
sp. AM4]
gi|214034019|gb|EEB74845.1| nicotinate-nucleotide diphosphorylase (carboxylating) [Thermococcus
sp. AM4]
Length = 277
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 25/59 (42%)
Query: 158 IRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
+ K + + +EV GG+T NI+ + D++ +G + K + + +
Sbjct: 219 VEALKREGLRDRVKIEVSGGITPENIEEYAKLDIDVISLGYLTHSVKNFDVSLEVIRKI 277
>gi|254457606|ref|ZP_05071034.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Campylobacterales bacterium GD 1]
gi|207086398|gb|EDZ63682.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [Campylobacterales bacterium GD 1]
Length = 236
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 134 DMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGAD 192
+ + ++ +N F G+ + +I + + ++ LE+ GG+ I+ +++ G D
Sbjct: 45 EWVHLVDLNGAFAGE---PKNLEQIIKIRQNC---NVKLELGGGIRDEETIQKMLEIGID 98
Query: 193 LLVVGS 198
+++GS
Sbjct: 99 RIILGS 104
>gi|153855394|ref|ZP_01996543.1| hypothetical protein DORLON_02557 [Dorea longicatena DSM 13814]
gi|149752214|gb|EDM62145.1| hypothetical protein DORLON_02557 [Dorea longicatena DSM 13814]
Length = 233
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 161 AKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDL 216
KA+ I + GG++ N+ L G + V S+ F +K ++L L
Sbjct: 171 LKAICDAVDIPVIAIGGISKENVSELAGTGICGIAVISAIFAEKDIKKATEKLKSL 226
>gi|114799757|ref|YP_760888.1| short chain dehydrogenase/reductase family oxidoreductase
[Hyphomonas neptunium ATCC 15444]
gi|114739931|gb|ABI78056.1| oxidoreductase, short chain dehydrogenase/reductase family
[Hyphomonas neptunium ATCC 15444]
Length = 304
Score = 34.8 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKSA 220
GG+ + +L +AGA++++ G N + + + L SA
Sbjct: 23 GGLGFEDALALARAGAEVVIAGR---NSEKGAAAVTAIRKLVPSA 64
>gi|312127723|ref|YP_003992597.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777742|gb|ADQ07228.1| nicotinate-nucleotide pyrophosphorylase [Caldicellulosiruptor
hydrothermalis 108]
Length = 278
Score = 34.8 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 153 STIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGS 198
T+ ++++A R + +E G + NI+ + + G D++ VGS
Sbjct: 218 FTVDEMKKAVEKAEGR-VLIEASGNINIDNIEEIAKTGVDIISVGS 262
>gi|295083981|emb|CBK65504.1| thiamine-phosphate diphosphorylase [Bacteroides xylanisolvens XB1A]
Length = 206
Score = 34.8 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 62/207 (29%), Gaps = 33/207 (15%)
Query: 21 EEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINI 80
E + G K I + D + + ++ + H I +D H+ +
Sbjct: 18 ESARMALEGGCKWIQLRMKD--------APLEEVEAVALQLKPLCKEHEAILILDDHVEL 69
Query: 81 IADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMT 140
D H R I G N T +++ D +
Sbjct: 70 TKKLEVDG--VHLGKKDMPIDQARQILGEAFIIGGTAN--TFEDVVQHYRAGADYL---- 121
Query: 141 VNPGFGGQQLIESTIPK----------IRQAKALIGKRSISLEV--DGGVTSRNIKSLVQ 188
G G +T K + + + +I + V GG+T +I +++
Sbjct: 122 ---GIG--PFRFTTTKKNLSPVLGLEGYSSILSQMKEANIEIPVVAIGGITFEDIPAILH 176
Query: 189 AGADLLVVGSSFFNQKGEISYAKRLND 215
G + + + + + +R+ +
Sbjct: 177 TGVNGIALSGTILGADNPVEETRRIIE 203
>gi|297527431|ref|YP_003669455.1| geranylgeranylglyceryl phosphate synthase family protein
[Staphylothermus hellenicus DSM 12710]
gi|297256347|gb|ADI32556.1| geranylgeranylglyceryl phosphate synthase family protein
[Staphylothermus hellenicus DSM 12710]
Length = 245
Score = 34.8 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 119 PETPVAILEDVIDEIDMILI--MTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
P I+ +MI I + + G G + + + P I + ++ V G
Sbjct: 149 PVNKPEIILSYAWAAEMIGIKYIYLEAGSGSPKPVPPSFPAIVK-----KNTNLITMVGG 203
Query: 177 GV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLNDLKKS 219
G+ + K LV +GAD++V G+ ++ +K ++ +KK+
Sbjct: 204 GIRSPFIAKKLVSSGADIIVTGTIV--EEDPDKASKIISAIKKN 245
>gi|238916423|ref|YP_002929940.1| thiamine-phosphate pyrophosphorylase [Eubacterium eligens ATCC
27750]
gi|238871783|gb|ACR71493.1| thiamine-phosphate pyrophosphorylase [Eubacterium eligens ATCC
27750]
Length = 208
Score = 34.8 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 16/117 (13%)
Query: 84 AGCDIITFHPESSPH-IRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTV- 141
AGC + F E I + ++++ + + V D I++ T+
Sbjct: 88 AGCGNVHFSMEHFKQMCDEQADVIKGLDC---MSVSCHSMEEAVIAVRAGADQIVLGTIF 144
Query: 142 ----NPGFGGQ--QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
PG G +E + ++ + GG+ NI+ +++AGAD
Sbjct: 145 ETQCKPGKMGAGLSFLEEVCRAVHTV-----NPTVKVFAIGGIKPDNIEEVLEAGAD 196
>gi|209525381|ref|ZP_03273922.1| N-acylglucosamine-6-phosphate 2-epimerase [Arthrospira maxima
CS-328]
gi|209494232|gb|EDZ94546.1| N-acylglucosamine-6-phosphate 2-epimerase [Arthrospira maxima
CS-328]
Length = 223
Score = 34.8 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 148 QQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRN-IKSLVQAGADLLVVGSSF 200
Q L + Q + I +GG++S K + GA+ +VVG++
Sbjct: 156 QHLSPPGFELLSQLVKQLDCPVIC---EGGISSPTLAKQAIALGANAIVVGTAI 206
>gi|330872496|gb|EGH06645.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 282
Score = 34.8 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVTAAHRIAPGKPVEVEVESLGELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R++ LE GG+ ++ + G D +
Sbjct: 213 GADIIMLDELSLDDMREAVRLTAGRAL-LEASGGINDDTLRVIADTGVDYI 262
>gi|146295321|ref|YP_001179092.1| thiamine-phosphate pyrophosphorylase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|189030311|sp|A4XG66|THIE_CALS8 RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|145408897|gb|ABP65901.1| thiamine-phosphate diphosphorylase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 219
Score = 34.8 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 47/149 (31%), Gaps = 18/149 (12%)
Query: 76 SHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAI----NPETPVAILEDVID 131
H+++ G D H + + +R I GV E V D I
Sbjct: 78 DHVDLCQMVGADG--VHLGQEDYPAKEVRKILGEDFIIGVTTHTKEQVEKAVEDGADYIG 135
Query: 132 EIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGA 191
+ T + + +R A I GG+ N+K +++AGA
Sbjct: 136 LGPVFQSFTKDKPHP-----PIGLEMVRWAATYCK---IPFVAIGGIKEHNLKDVLKAGA 187
Query: 192 DL--LVVGSSFFNQKGEISYAKRLNDLKK 218
LV + K+L D+ K
Sbjct: 188 KCVSLV--TEIVGSDDISQKIKKLWDIIK 214
>gi|307594626|ref|YP_003900943.1| nicotinate-nucleotide pyrophosphorylase [Vulcanisaeta distributa
DSM 14429]
gi|307549827|gb|ADN49892.1| nicotinate-nucleotide pyrophosphorylase [Vulcanisaeta distributa
DSM 14429]
Length = 276
Score = 34.8 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 14/107 (13%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTG-VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQL 150
H + ++ I T V + T + D IL+ + P
Sbjct: 165 HIAVYGDLEGLIKLIKERTSFTKKVEVEVSTYEDAIRAYRAGADAILLDNMKP------- 217
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
+P +R+ K + LE GG+T N+ + G D++ G
Sbjct: 218 -SDIVPIVRELKGK-----VILEASGGITPDNVVEYARTGVDIISSG 258
>gi|299830578|ref|YP_003735026.1| thiamine biosynthesis protein G [Durinskia baltica]
gi|297384942|gb|ADI40241.1| thiamine biosynthesis protein G [Durinskia baltica]
Length = 268
Score = 34.8 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 8/110 (7%)
Query: 108 AMGKKTGVAINPETPVAILEDV-IDEIDMILIMTVNPGFG-GQQLIESTIPKIRQAKALI 165
K G + P + + ++++ +M + G GQ L KI +I
Sbjct: 131 EFLVKKGFTVLPYINADPILALHLEDLGCATVMPLGSPIGSGQGLNNLANIKI-----II 185
Query: 166 GKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLN 214
+ + VD G+ + ++ GAD +++ ++ K A +N
Sbjct: 186 ENAGVPVIVDAGIGAPSEATAAMELGADGILLNTAVAQSKNPAQMALAMN 235
>gi|238064215|ref|ZP_04608924.1| malonyl CoA-ACP transferase [Micromonospora sp. ATCC 39149]
gi|237886026|gb|EEP74854.1| malonyl CoA-ACP transferase [Micromonospora sp. ATCC 39149]
Length = 1102
Score = 34.8 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Query: 129 VIDEIDMILIMTVNPGFGGQ-------QLIESTIPKIRQAKALIGKRS-ISLEVDGGV-T 179
+ E+ M +TV GG L+ + + + G + + GG+ T
Sbjct: 849 LAAELPMADDLTVEADSGGHTDGGVAYALMPAMLRLRDDLRRQHGYHDRVRIGAAGGIGT 908
Query: 180 SRNIKSLVQAGADLLVVGS 198
+ + GAD LV GS
Sbjct: 909 PEAAAAALVLGADYLVTGS 927
>gi|297583347|ref|YP_003699127.1| thiamine-phosphate pyrophosphorylase [Bacillus selenitireducens
MLS10]
gi|297141804|gb|ADH98561.1| thiamine-phosphate pyrophosphorylase [Bacillus selenitireducens
MLS10]
Length = 216
Score = 34.8 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
Query: 159 RQAKALIGKRSISLEVD----------GGVTSRNIKSLVQAGADLLVVGSSFFNQKGEIS 208
AK IG I + D GG+T N +++AGAD + + S+ Q+ +
Sbjct: 144 ADAKDAIGPAGIRIYRDAGIKMPVVAIGGITPENTPGIMKAGADGVSMISAIAGQEDPKA 203
Query: 209 YAKRLN 214
A+
Sbjct: 204 AARAFQ 209
>gi|327400646|ref|YP_004341485.1| Nicotinate phosphoribosyltransferase [Archaeoglobus veneficus SNP6]
gi|327316154|gb|AEA46770.1| Nicotinate phosphoribosyltransferase [Archaeoglobus veneficus SNP6]
Length = 382
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 130 IDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQA 189
I+ ++ + + ++ + + I +IR + G++ + + + GG+ I L
Sbjct: 215 IENVERVDGIRLDTPSSRRGDLRKIIEEIRWELDIRGRKDVKIVLSGGIDVETILKLRDV 274
Query: 190 GADLLVVGSSF 200
D+ VG+
Sbjct: 275 -VDVFGVGTYI 284
>gi|312621336|ref|YP_004022949.1| transposase is4 family protein [Caldicellulosiruptor kronotskyensis
2002]
gi|312621859|ref|YP_004023472.1| transposase is4 family protein [Caldicellulosiruptor kronotskyensis
2002]
gi|312622987|ref|YP_004024600.1| transposase is4 family protein [Caldicellulosiruptor kronotskyensis
2002]
gi|312201803|gb|ADQ45130.1| transposase IS4 family protein [Caldicellulosiruptor kronotskyensis
2002]
gi|312202326|gb|ADQ45653.1| transposase IS4 family protein [Caldicellulosiruptor kronotskyensis
2002]
gi|312203454|gb|ADQ46781.1| transposase IS4 family protein [Caldicellulosiruptor kronotskyensis
2002]
Length = 567
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 145 FGGQQLIESTIPKI-RQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVV 196
F G + T+ KI R+ K I + D G+ SR N+K + +AG D +V
Sbjct: 240 FPGNTIDSKTMVKILRKLKEKFSIDKIVIVADKGLNSRLNLKMIKEAGYDYIVA 293
>gi|218702625|ref|YP_002410254.1| thiazole synthase [Escherichia coli IAI39]
gi|226703899|sp|B7NRS3|THIG_ECO7I RecName: Full=Thiazole synthase
gi|218372611|emb|CAR20486.1| thiamin biosynthesis ThiGH complex subunit [Escherichia coli IAI39]
Length = 256
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 55/139 (39%), Gaps = 16/139 (11%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSALAID 224
++ AK LA+D
Sbjct: 213 PVNMAKAFR------LAVD 225
>gi|152979172|ref|YP_001344801.1| thiamine-phosphate pyrophosphorylase [Actinobacillus succinogenes
130Z]
gi|171704401|sp|A6VPG9|THIE_ACTSZ RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|150840895|gb|ABR74866.1| thiamine-phosphate pyrophosphorylase [Actinobacillus succinogenes
130Z]
Length = 221
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 155 IPKIRQAKAL-IGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ IRQ L I K +++ GG+ N + + GA+ + V S+ + L
Sbjct: 161 MEFIRQIHELGIDKPCVAI---GGIHEDNTAEIRRLGANGVAVISAITRSNDIARTVQNL 217
>gi|157120255|ref|XP_001653573.1| hypothetical protein AaeL_AAEL001570 [Aedes aegypti]
gi|108883086|gb|EAT47311.1| conserved hypothetical protein [Aedes aegypti]
Length = 1215
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 11/96 (11%)
Query: 40 DGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIADAGCDIITFHPESSPHI 99
DG VP+ ++ + + DC L + + + + D + FH E+
Sbjct: 626 DGVIVPSGPKSHELDDECQGFWKYPRDCELDKHNCEYYASWQVTGKGDSMHFHIET---- 681
Query: 100 RRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDM 135
+ G TG+ + + ++ + VI +D+
Sbjct: 682 -------NNTGTWTGIGFSKDQKMSQTDAVIGWVDL 710
>gi|88601964|ref|YP_502142.1| hypothetical protein Mhun_0667 [Methanospirillum hungatei JF-1]
gi|88187426|gb|ABD40423.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
Length = 367
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 17/90 (18%)
Query: 4 SIQIVPSILAAD--FSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
S++I I A D SRL + KAGA +H D+MD F ++ +R S
Sbjct: 158 SVKIRAGIAADDVELSRL------LWKAGADILHIDLMD--------FDHTHLKKIRDTS 203
Query: 62 DSVFDCHLMISSIDSHINIIADAGCDIITF 91
+ I++ + + A G D+I+
Sbjct: 204 PIFIIANNGITTFEKAKEMFA-HGADMISL 232
>gi|146296678|ref|YP_001180449.1| transposase, IS4 family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|146297508|ref|YP_001181279.1| transposase, IS4 family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410254|gb|ABP67258.1| transposase, IS4 family [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145411084|gb|ABP68088.1| transposase, IS4 family [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 567
Score = 34.8 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 145 FGGQQLIESTIPKI-RQAKALIGKRSISLEVDGGVTSR-NIKSLVQAGADLLVV 196
F G + T+ KI R+ K I + D G+ SR N+K + +AG D +V
Sbjct: 240 FPGNTIDSKTMVKILRKLKEKFSIDKIVIVADKGLNSRLNLKMIKEAGYDYIVA 293
>gi|327400417|ref|YP_004341256.1| Pyridoxal biosynthesis lyase pdxS [Archaeoglobus veneficus SNP6]
gi|327315925|gb|AEA46541.1| Pyridoxal biosynthesis lyase pdxS [Archaeoglobus veneficus SNP6]
Length = 334
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F YAK +
Sbjct: 253 GGVATPADAAFMMQLGADGVFVGSGIFKSSNPPEYAKAI 291
>gi|325968399|ref|YP_004244591.1| quinolinate phosphoribosyl transferase [Vulcanisaeta moutnovskia
768-28]
gi|323707602|gb|ADY01089.1| Quinolinate phosphoribosyl transferase [Vulcanisaeta moutnovskia
768-28]
Length = 415
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 151 IESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSF 200
+E+ + ++R L G +++ + V GGV I L AD+ VG+S
Sbjct: 266 MEAIVREVRWTLDLAGYKNVKILVSGGVDEDEIIKLRDI-ADMFGVGTSI 314
>gi|313893298|ref|ZP_07826873.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. oral taxon
158 str. F0412]
gi|313442194|gb|EFR60611.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. oral taxon
158 str. F0412]
Length = 484
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 16/132 (12%)
Query: 78 INIIADAGCDII---TFHPESSPHIRRSLRTIH-AMGKKTGVAINPETPVAILEDVIDEI 133
++ + A D+I T H S + R+L+ I A +A N T E +I+
Sbjct: 234 LDALVSAKADVIIVDTAHG-HSAGVLRTLKDIKQAYPHIPVIAGNVATAAGT-EALIEAG 291
Query: 134 DMILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKS 185
+ + + PG G + I + +A + + I + DGG+ +I
Sbjct: 292 ADAVKVGIGPGSICTTRVIAGIGV--PQITAVYEAAQVGRRYGIPIIADGGIKYSGDIAK 349
Query: 186 LVQAGADLLVVG 197
+ AGA+++++G
Sbjct: 350 AIAAGANVVMMG 361
>gi|295400266|ref|ZP_06810245.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Geobacillus thermoglucosidasius C56-YS93]
gi|294977541|gb|EFG53140.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Geobacillus thermoglucosidasius C56-YS93]
Length = 216
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 176 GGVTSRNIKSLVQAGADLLVVGSSFFNQK 204
GG+ + ++AG D + VGSS N K
Sbjct: 156 GGINKETVGEYIKAGVDAVGVGSSLVNVK 184
>gi|138895423|ref|YP_001125876.1| 2-keto-3-deoxy-6-phospho-gluconate aldolase [Geobacillus
thermodenitrificans NG80-2]
gi|196249125|ref|ZP_03147824.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Geobacillus sp. G11MC16]
gi|134266936|gb|ABO67131.1| 2-keto-3-deoxy-6-phospho-gluconate aldolase [Geobacillus
thermodenitrificans NG80-2]
gi|196211354|gb|EDY06114.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Geobacillus sp. G11MC16]
Length = 216
Score = 34.8 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 168 RSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
I L V GG+ + ++AGAD V G
Sbjct: 148 PHIPLMVTGGINRETVGEYIKAGAD--VAG 175
>gi|331006157|ref|ZP_08329483.1| Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [gamma proteobacterium IMCC1989]
gi|330420038|gb|EGG94378.1| Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide
isomerase [gamma proteobacterium IMCC1989]
Length = 242
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 120 ETPVAILEDVIDE-IDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGV 178
++PV + +D+ + ++ +N F G+ + + +I QA + +++ GG+
Sbjct: 30 DSPVNFAKQWVDQGCRRLHLVDLNGAFAGEPINGEVVTEIAQA-----FPKLPIQIGGGI 84
Query: 179 -TSRNIKSLVQAGADLLVVGS 198
+ I+ +QAG + +++G+
Sbjct: 85 RSGEIIEKYLQAGVNYVIIGT 105
>gi|225574897|ref|ZP_03783507.1| hypothetical protein RUMHYD_02975 [Blautia hydrogenotrophica DSM
10507]
gi|225037865|gb|EEG48111.1| hypothetical protein RUMHYD_02975 [Blautia hydrogenotrophica DSM
10507]
Length = 484
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 58/150 (38%), Gaps = 19/150 (12%)
Query: 70 MISSIDSHINIIADAGCDIITF-----HPESSPHIRRSLRTIHAMGKKTGVAINPETPVA 124
+ S++ + + +A D+I H E +I R++R I A + +
Sbjct: 224 ITSNVLARVEALAKVNVDVIVVDSAHGHSE---NILRAVREIKAAYPELQLIAGNVATGE 280
Query: 125 ILEDVIDEIDMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGG 177
+ +I+ + + + PG G + I + + + I + DGG
Sbjct: 281 ATKALIEAGVDAVKVGIGPGSICTTRVVAGIGV--PQITAVMDCYEVAKEYGIPVIADGG 338
Query: 178 VTSR-NIKSLVQAGADLLVVGSSFFNQKGE 206
+ +I + AGA++ ++GS F E
Sbjct: 339 IKYSGDITKAIAAGANVCMMGS-IFAGCDE 367
>gi|188494221|ref|ZP_03001491.1| thiazole biosynthesis protein ThiG [Escherichia coli 53638]
gi|193066428|ref|ZP_03047475.1| thiazole biosynthesis protein ThiG [Escherichia coli E22]
gi|193067861|ref|ZP_03048827.1| thiazole biosynthesis protein ThiG [Escherichia coli E110019]
gi|194429969|ref|ZP_03062478.1| thiazole biosynthesis protein ThiG [Escherichia coli B171]
gi|188489420|gb|EDU64523.1| thiazole biosynthesis protein ThiG [Escherichia coli 53638]
gi|192925952|gb|EDV80599.1| thiazole biosynthesis protein ThiG [Escherichia coli E22]
gi|192958836|gb|EDV89273.1| thiazole biosynthesis protein ThiG [Escherichia coli E110019]
gi|194411998|gb|EDX28311.1| thiazole biosynthesis protein ThiG [Escherichia coli B171]
Length = 271
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 113 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 172
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 173 NQGLETRAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 227
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 228 PVNMAKAFRLAVEAGL 243
>gi|157373576|ref|YP_001472176.1| patatin [Shewanella sediminis HAW-EB3]
gi|157315950|gb|ABV35048.1| patatin [Shewanella sediminis HAW-EB3]
Length = 751
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 167 KRSISLEVDGGVTSRN--IKSLVQAGADLLVV---GSSFFNQKGEISYAKRLNDL 216
+ L VDGG+ + N I ++ GAD+++ GSS ++ S LN L
Sbjct: 213 EYEGKLLVDGGI-ANNMPIDVVMGMGADIIIAVDIGSSLVKKEELNSTVAVLNQL 266
>gi|58582835|ref|YP_201851.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|188577674|ref|YP_001914603.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|58427429|gb|AAW76466.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|188522126|gb|ACD60071.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 295
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + ++ A + + + ET + L + + ++ I+ + Q +
Sbjct: 177 HIRAAGSLSAAVHAARAQQPQLPLVVEVET-LEQLHEAL-QVGCTRILIDDFD---QAMR 231
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+R AL +R I LEV G V I+++ + G D +
Sbjct: 232 REA---VRIVAALPLERRIPLEVSGSVDLAGIRAVAEDGVDCI 271
>gi|71734217|ref|YP_274181.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|289646663|ref|ZP_06478006.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. aesculi str. 2250]
gi|71554770|gb|AAZ33981.1| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate
aldolase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|330888133|gb|EGH20794.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. mori str. 301020]
gi|331010677|gb|EGH90733.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 211
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 99 IRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
+ + A K G+ ++P TP + + D++ + F +Q+ +
Sbjct: 89 PHSDAKVLRAA-KAAGLFLSPGVATPTEAFAALAEGADVLKL------FPAEQMSPAV-- 139
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
++ A++ K +I L V GG++ N+K + AG +GS F
Sbjct: 140 -VKAWLAVLPKGTILLPV-GGISPDNMKVFLDAGVKGFGLGSGLFK 183
>gi|84624702|ref|YP_452074.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|84368642|dbj|BAE69800.1| nicotinate-nucleotide pyrophosphorylase [Xanthomonas oryzae pv.
oryzae MAFF 311018]
Length = 291
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H ++ + ++ A + + + ET + L + + ++ I+ + Q +
Sbjct: 173 HIRAAGSLSAAVHAARAQQPQLPLVVEVET-LEQLHEAL-QVGCTRILIDDFD---QAMR 227
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+R AL +R I LEV G V I+++ + G D +
Sbjct: 228 REA---VRIVAALPLERRIPLEVSGSVDLAGIRAVAEDGVDCI 267
>gi|220932880|ref|YP_002509788.1| inosine-5'-monophosphate dehydrogenase [Halothermothrix orenii H
168]
gi|219994190|gb|ACL70793.1| inosine-5'-monophosphate dehydrogenase [Halothermothrix orenii H
168]
Length = 486
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 14/138 (10%)
Query: 72 SSIDSHINIIADAGCDII---TFHPESSPHIRRSLRTIH-AMGKKTGVAINPETPVAILE 127
D + + AG D+I T H S + +++ I +A N T E
Sbjct: 227 DDTDDRVAALVKAGVDVIVIDTAHG-HSVGVLKTVERIKGNYPDVPVIAGNVATA-EATE 284
Query: 128 DVIDEIDMILIMTVNPGF-GGQQLIE----STIPKIRQAKALIGKRSISLEVDGGV--TS 180
D+I ++ + V PG ++I I I + I + DGG+ +
Sbjct: 285 DLIKAGADVVKVGVGPGSICTTRVIAGVGVPQITAIYDCAEKAKEYGIPVIADGGIKYSG 344
Query: 181 RNIKSLVQAGADLLVVGS 198
+K+LV AGAD++++GS
Sbjct: 345 DIVKALV-AGADVVMIGS 361
>gi|312882179|ref|ZP_07741927.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370141|gb|EFP97645.1| 3-keto-L-gulonate-6-phosphate decarboxylase [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 215
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGE 206
G + + K+ Q ++ I L + GG++ ++I + G + + KG
Sbjct: 146 GVTWNKDDLEKMHQL----SEKGIELSITGGISPQDIALFKDLNVKSFIAGRALSSDKGR 201
>gi|289670426|ref|ZP_06491501.1| hypothetical protein XcampmN_18558 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 230
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Query: 114 GVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLE 173
G A +A + + + +M + F Q ++ +++ + R +
Sbjct: 132 GCAPEAIDSLAEAIALQPRLQLRGLMAIPAPFPEQARRQAAFTRMQALFEQLKTR--HRQ 189
Query: 174 VDG---GVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYA 210
VD G++S + AGA ++ VG++ F +G+ A
Sbjct: 190 VDTLSMGMSSD-FAEAIAAGATMVRVGTALFGARGQAPAA 228
>gi|116873538|ref|YP_850319.1| pyridoxine biosynthesis protein [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|123464006|sp|A0AKK8|PDXS_LISW6 RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|116742416|emb|CAK21540.1| pyridoxine biosynthesis protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 295
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F +A +
Sbjct: 214 GGVATPSDAALMMELGADGVFVGSGIFKSDNPAKFASAI 252
>gi|73668219|ref|YP_304234.1| geranylgeranylglyceryl phosphate synthase-like protein
[Methanosarcina barkeri str. Fusaro]
gi|91207268|sp|Q46EN8|GGGPS_METBF RecName: Full=Geranylgeranylglyceryl phosphate synthase; Short=GGGP
synthase; Short=GGGPS; AltName:
Full=(S)-3-O-geranylgeranylglyceryl phosphate synthase;
AltName: Full=Phosphoglycerol geranylgeranyltransferase
gi|72395381|gb|AAZ69654.1| geranylgeranylglyceryl diphosphate synthase [Methanosarcina barkeri
str. Fusaro]
Length = 247
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGV-TSRNIKSLVQAGADLLVVGS 198
I K ++G+ L V GG+ + K AGAD++V G+
Sbjct: 181 PINPEMIGAVKKVLGEN--KLIVGGGIRDAEAAKLCASAGADMIVTGT 226
>gi|194434769|ref|ZP_03067020.1| thiazole biosynthesis protein ThiG [Shigella dysenteriae 1012]
gi|194416993|gb|EDX33111.1| thiazole biosynthesis protein ThiG [Shigella dysenteriae 1012]
gi|332083879|gb|EGI89092.1| thiazole biosynthesis protein thiG [Shigella boydii 5216-82]
gi|332085397|gb|EGI90567.1| thiazole biosynthesis protein thiG [Shigella dysenteriae 155-74]
Length = 256
Score = 34.8 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 10/136 (7%)
Query: 91 FHPESSPHIRRSLRTIHAMGKKT--GVAINPETPVAILEDV-IDEIDMILIMTVNPGFG- 146
HP++ + + T+ A G + P + ++E+ +M + G
Sbjct: 98 IHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGS 157
Query: 147 GQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSLVQAGADLLVVGSSFFNQKG 205
Q L + +I +I + ++ + VD G+ + ++ GAD ++V ++
Sbjct: 158 NQGLETHAMLEI-----IIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADD 212
Query: 206 EISYAKRLNDLKKSAL 221
++ AK ++ L
Sbjct: 213 PVNMAKAFRLAVEAGL 228
>gi|315442244|ref|YP_004075123.1| thiamine-phosphate diphosphorylase [Mycobacterium sp. Spyr1]
gi|315260547|gb|ADT97288.1| thiamine-phosphate diphosphorylase [Mycobacterium sp. Spyr1]
Length = 224
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 155 IPKIRQAKALI-GKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
+ +R+ AL K ++ GG+ ++ + ++ AGA +VV + + + A++L
Sbjct: 160 LDLVREVAALNTAKPWFAI---GGIDAQRLPDVLDAGARRVVVVRAITAAEDPRAAAEQL 216
Query: 214 NDLKKSA 220
+ SA
Sbjct: 217 AGMLDSA 223
>gi|307730756|ref|YP_003907980.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia sp. CCGE1003]
gi|307585291|gb|ADN58689.1| nicotinate-nucleotide pyrophosphorylase [Burkholderia sp. CCGE1003]
Length = 309
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 115 VAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEV 174
+A+N P+ I + +++++ L L T +R+A + R++ LEV
Sbjct: 216 LALNAGVPIQIEVETLEQLETALAH----RAQSVLLDNFTFDAMREAVRITAGRAV-LEV 270
Query: 175 DGGVTSRNIKSLVQAGAD 192
GGV +K++ + G D
Sbjct: 271 SGGVNFDTVKTIAETGVD 288
>gi|66044070|ref|YP_233911.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
syringae B728a]
gi|63254777|gb|AAY35873.1| Nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
syringae B728a]
gi|330973696|gb|EGH73762.1| nicotinate-nucleotide pyrophosphorylase [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 282
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 19/111 (17%)
Query: 98 HIRRS----LRTIHAMGKKT--GVA--------INPETPVAILEDVIDEIDMILIMTVNP 143
H R I G+A I P PV + + + E+ L +
Sbjct: 157 HNHRIGLYDAFLIKENHIAACGGIAQAVEAAHRIAPGKPVEVEVESLGELKQAL----DA 212
Query: 144 GFGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
G L E ++ +R+A L R+ SLE GG+ ++ + + G D +
Sbjct: 213 GADIIMLDELSLDDMREAVRLTAGRA-SLEASGGINDDTLRVIAETGVDYI 262
>gi|17232303|ref|NP_488851.1| tryptophan synthase subunit alpha [Nostoc sp. PCC 7120]
gi|17133948|dbj|BAB76510.1| tryptophan synthase alpha chain [Nostoc sp. PCC 7120]
Length = 266
Score = 34.8 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 10/149 (6%)
Query: 75 DSHINIIADAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEI- 133
D + IA G + L+ G + I P + +E +
Sbjct: 111 DKFLEQIAAVGVAGLVVPDLPLEEAAGLLKPATERGIDLILLIAPTSSSERIEAIAHSSQ 170
Query: 134 DMILIMTVN--PGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG-GVT-SRNIKSLVQA 189
I +++V G Q + + +RQ + + K + V G G++ + +
Sbjct: 171 GFIYLVSVTGVTGVRSQVEVRVS-DLLRQIRQVTDKP---IAV-GFGISQPEQATQVKEW 225
Query: 190 GADLLVVGSSFFNQKGEISYAKRLNDLKK 218
GAD +VGS+F + + A+ L+ + +
Sbjct: 226 GADGAIVGSAFVQRLSAGTPAEGLSAIAE 254
>gi|320324875|gb|EFW80947.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320329240|gb|EFW85237.1| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 211
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 99 IRRSLRTIHAMGKKTGVAINP--ETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIP 156
+ + A K G+ ++P TP + + D++ + F +Q+ +
Sbjct: 89 PHSDAKVLRAA-KAAGLFLSPGAATPTEAFAALAEGADVLKL------FPAEQMSPAV-- 139
Query: 157 KIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVGSSFFN 202
++ A++ K +I L V GG++ N+K + AG +GS F
Sbjct: 140 -VKAWLAVLPKGTILLPV-GGISPDNMKVFLDAGVKGFGLGSGLFK 183
>gi|300715327|ref|YP_003740130.1| Nicotinate-nucleotide pyrophosphorylase [Erwinia billingiae Eb661]
gi|299061163|emb|CAX58270.1| Nicotinate-nucleotide pyrophosphorylase [Erwinia billingiae Eb661]
Length = 296
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 117 INPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRSISLEVDG 176
++P+ PV + + +DE+ L G L T+ ++R+A ++ LEV G
Sbjct: 205 LHPDVPVEVEVESLDELTQAL----AAGADIVMLDNFTVEQMREAVKQTDGNAL-LEVSG 259
Query: 177 GVTSRNIKSLVQAGADLLVVG 197
VT ++ + G D + VG
Sbjct: 260 NVTDETLRIFAETGVDYISVG 280
>gi|206895635|ref|YP_002247005.1| arginine decarboxylase [Coprothermobacter proteolyticus DSM 5265]
gi|206738252|gb|ACI17330.1| arginine decarboxylase [Coprothermobacter proteolyticus DSM 5265]
Length = 485
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 20/96 (20%)
Query: 110 GKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLIESTIPKIRQAKALIGKRS 169
+ I +L + +D+ D+ + NP + G IR+ ++ +
Sbjct: 136 NVDPELGITTSVSPEVLREYLDKHDVDAVFLTNPNYYG------VSGNIRELVDIVHEHG 189
Query: 170 ISLEVDGGVTSRNIK----------SLVQAGADLLV 195
+ + VD + S V AGADL+V
Sbjct: 190 LPIVVD----EAHGAHFHFHQALPLSAVDAGADLVV 221
>gi|163788668|ref|ZP_02183113.1| putative inosine-5'-monophosphate dehydrogenase [Flavobacteriales
bacterium ALC-1]
gi|159875905|gb|EDP69964.1| putative inosine-5'-monophosphate dehydrogenase [Flavobacteriales
bacterium ALC-1]
Length = 489
Score = 34.8 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 78 INIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ AG D + T H + + L++I K V + + +++
Sbjct: 236 AEALVKAGVDAVVIDTAHG-HTVGVVTILKSIKQQFPKLEVIVGNIATGEAAKYLVEAGA 294
Query: 135 MILIMTVNPGF-------GGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSL 186
+ + + PG G + + A I + + DGG+ + +I
Sbjct: 295 DAVKVGIGPGSICTTRVVAGVGF--PQFSAVLEVAAAIKGTGVPVIADGGIRYTGDIPKA 352
Query: 187 VQAGADLLVVGS 198
+ AGAD +++GS
Sbjct: 353 IAAGADTVMLGS 364
>gi|288916806|ref|ZP_06411180.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EUN1f]
gi|288351880|gb|EFC86083.1| short-chain dehydrogenase/reductase SDR [Frankia sp. EUN1f]
Length = 244
Score = 34.8 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 176 GGVTSRNIKSLVQAGADLLVVG 197
GG+ + + AGA ++V G
Sbjct: 15 GGIGRETARLMAAAGARVVVTG 36
>gi|226943068|ref|YP_002798141.1| thiamine-phosphate pyrophosphorylase [Azotobacter vinelandii DJ]
gi|259518397|sp|C1DMY6|THIE_AZOVD RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|226717995|gb|ACO77166.1| Thiamine monophosphate synthase [Azotobacter vinelandii DJ]
Length = 209
Score = 34.8 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLL 194
+++ + +A+A + +++ GGVT N L++ GA ++
Sbjct: 141 PASLELLERARARFPQPLVAI---GGVTLDNAPELIRRGAAMI 180
>gi|294499123|ref|YP_003562823.1| pyridoxine biosynthesis protein [Bacillus megaterium QM B1551]
gi|294349060|gb|ADE69389.1| pyridoxine biosynthesis protein [Bacillus megaterium QM B1551]
Length = 286
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +A+ +
Sbjct: 205 GGVATPADAALMMQLGADGVFVGSGIFKSDNPEKFARAI 243
>gi|317126754|ref|YP_004093036.1| pyridoxine biosynthesis protein [Bacillus cellulosilyticus DSM
2522]
gi|315471702|gb|ADU28305.1| pyridoxine biosynthesis protein [Bacillus cellulosilyticus DSM
2522]
Length = 295
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + ++Q GAD + VGS F +A+ +
Sbjct: 214 GGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFARAI 252
>gi|302530628|ref|ZP_07282970.1| thiamine-phosphate pyrophosphorylase [Streptomyces sp. AA4]
gi|302439523|gb|EFL11339.1| thiamine-phosphate pyrophosphorylase [Streptomyces sp. AA4]
Length = 221
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ + ++ AGA +VV + + + A+ L
Sbjct: 178 IGGIDETRLPEVLAAGATRIVVVRAITEAEDPKAAAQTLKA 218
>gi|226941577|ref|YP_002796651.1| ThiE [Laribacter hongkongensis HLHK9]
gi|254784183|sp|C1DCM3|THIE_LARHH RecName: Full=Thiamine-phosphate pyrophosphorylase; Short=TMP
pyrophosphorylase; Short=TMP-PPase; AltName:
Full=Thiamine-phosphate synthase
gi|226716504|gb|ACO75642.1| ThiE [Laribacter hongkongensis HLHK9]
Length = 211
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 169 SISLEVDGGVTSRNIKSLVQAGAD-LLVVGSSFFNQKGEISYAKRLNDLK 217
S+ GG+ N ++ AG D + VV S+ + + L LK
Sbjct: 159 SLPTVGIGGIAPANAGAVFAAGVDGVAVV-SAICTAADPAAVTRELYALK 207
>gi|126179673|ref|YP_001047638.1| hypothetical protein Memar_1729 [Methanoculleus marisnigri JR1]
gi|125862467|gb|ABN57656.1| conserved hypothetical protein [Methanoculleus marisnigri JR1]
Length = 378
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 2 TPSIQIVPSILAADFSRLGEEISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYS 61
T S++I + AAD + L + KAGA +H D+MD FG + +R +R+ S
Sbjct: 158 TVSVKIRAGV-AADDAVLAR---TVWKAGADILHVDLMD--------FGHNKVRQIRNAS 205
Query: 62 DSVFDCHLMISSIDSHINII 81
+ I++ D ++
Sbjct: 206 PLTLIANNSITTFDKAMDAF 225
>gi|92115418|ref|YP_575346.1| thiamine-phosphate pyrophosphorylase [Chromohalobacter salexigens
DSM 3043]
gi|91798508|gb|ABE60647.1| thiamine-phosphate diphosphorylase [Chromohalobacter salexigens DSM
3043]
Length = 220
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 175 DGGVTSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRLND 215
GG+ ++ +AGADLL + F + + L
Sbjct: 172 IGGLDVHTMRLAREAGADLLATVHAVFGAGDPAAAVRALQA 212
>gi|46396457|sp|Q8L1A8|PDXS_BACCI RecName: Full=Pyridoxal biosynthesis lyase pdxS
gi|22090614|dbj|BAC06852.1| superoxide-inducible protein [Bacillus circulans]
Length = 293
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 176 GGV-TSRNIKSLVQAGADLLVVGSSFFNQKGEISYAKRL 213
GGV T + +++ GAD + VGS F +A+ +
Sbjct: 212 GGVATPSDAALMMELGADGVFVGSGIFKSDSPEKFARAI 250
>gi|298208267|ref|YP_003716446.1| putative inosine-5'-monophosphate dehydrogenase [Croceibacter
atlanticus HTCC2559]
gi|83848188|gb|EAP86058.1| putative inosine-5'-monophosphate dehydrogenase [Croceibacter
atlanticus HTCC2559]
Length = 490
Score = 34.8 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 78 INIIADAGCDII---TFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEID 134
+ +AG D + T H + + L+ + K V + + +++
Sbjct: 237 AEALVNAGVDAVIIDTAHG-HTKGVVAVLKDVKKKFPKLEVVVGNIATGEAAKYLVEAGA 295
Query: 135 MILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVT-SRNIKSL 186
+ + + PG G + + A I + + DGG+ + +I
Sbjct: 296 DAVKVGIGPGSICTTRVVAGVGF--PQFSAVLEVAAAIKGSGVPVIADGGIRYTGDIPKA 353
Query: 187 VQAGADLLVVGS 198
+ AGAD +++GS
Sbjct: 354 IAAGADTVMLGS 365
>gi|307301493|ref|ZP_07581253.1| thiamine-phosphate pyrophosphorylase [Sinorhizobium meliloti
BL225C]
gi|306903550|gb|EFN34138.1| thiamine-phosphate pyrophosphorylase [Sinorhizobium meliloti
BL225C]
Length = 201
Score = 34.8 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 15/171 (8%)
Query: 23 ISNITKAGAKQIHFDVMDGCFVPNISFGADVIRSLRSYSDSVFDCHLMISSIDSHINIIA 82
I + G K + + D + IR + +V H ++ + +
Sbjct: 16 IERLVPLGVKLVQLRIKDR--------SKEDIRHQIRVARAVCSAHECQLIVNDYWQLTI 67
Query: 83 DAGCDIITFHPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVN 142
+ CD I E + I A G K GV+ + E +A D + + +
Sbjct: 68 EEACDFIHLGQEDLADAD--VAAIRAAGLKLGVSTHDEAELAKALAAEP--DYVALGPIY 123
Query: 143 PGFGGQ-QLIESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGAD 192
P + + + ++ + + + L GG+ + I+ + GAD
Sbjct: 124 PTILKKMKWAPQGLERLSWWRERV--HPLPLVAIGGLNTERIEGVFAHGAD 172
>gi|224535434|ref|ZP_03675973.1| hypothetical protein BACCELL_00296 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522956|gb|EEF92061.1| hypothetical protein BACCELL_00296 [Bacteroides cellulosilyticus
DSM 14838]
Length = 282
Score = 34.8 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 92 HPESSPHIRRSLRTIHAMGKKTGVAINPETPVAILEDVIDEIDMILIMTVNPGFGGQQLI 151
H + + I +++ K+ G + E V +++ +D+ G
Sbjct: 169 HVDFAGGIDKAINRAKEYCKEKGKDLKIEIEVRNFDELQQVLDL-------GGIDRIMFD 221
Query: 152 ESTIPKIRQAKALIGKRSISLEVDGGVTSRNIKSLVQAGADLLVVG 197
T ++A ++G R E GG+T ++ + G D + VG
Sbjct: 222 NFTPEMTKKAVDMVGGR-YETESSGGITFDTLRDYAECGVDFISVG 266
>gi|78223496|ref|YP_385243.1| inosine-5'-monophosphate dehydrogenase [Geobacter metallireducens
GS-15]
gi|78194751|gb|ABB32518.1| inosine-5'-monophosphate dehydrogenase [Geobacter metallireducens
GS-15]
Length = 491
Score = 34.8 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 16/133 (12%)
Query: 78 INIIADAGCDIITFHPESSPHIRRSLRTIHAMG-KKTG---VAINPETPVAILEDVIDEI 133
+ + AG D+I + H + L I ++ G +A N T E +I
Sbjct: 234 ADALVKAGVDVIAI-DTAHGHSQGVLDAIRSLKSAFPGVELIAGNIATA-EAAEALIKAG 291
Query: 134 DMILIMTVNPG-------FGGQQLIESTIPKIRQAKALIGKRSISLEVDGGVTSR-NIKS 185
+ + + PG G + I I Q + K I L DGGV ++
Sbjct: 292 VDAIKVGIGPGSICTTRVVAGVGV--PQISAIAQCAKVARKYDIPLIADGGVKYSGDVTK 349
Query: 186 LVQAGADLLVVGS 198
V AGAD++++GS
Sbjct: 350 AVAAGADVIMIGS 362
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.163 0.507
Lambda K H
0.267 0.0499 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,592,313,709
Number of Sequences: 14124377
Number of extensions: 204081935
Number of successful extensions: 685060
Number of sequences better than 10.0: 5787
Number of HSP's better than 10.0 without gapping: 6742
Number of HSP's successfully gapped in prelim test: 2138
Number of HSP's that attempted gapping in prelim test: 667072
Number of HSP's gapped (non-prelim): 9809
length of query: 224
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 90
effective length of database: 2,950,127,112
effective search space: 265511440080
effective search space used: 265511440080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 79 (34.8 bits)