HHsearch alignment for GI: 254780976 and conserved domain: pfam04312
>pfam04312 DUF460 Protein of unknown function (DUF460). Archaeal protein of unknown function.
Probab=97.33 E-value=0.0042 Score=39.40 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=73.2
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 99839999868876899963076511012101104774156898999986516775899721357888884479999999
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFV 94 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~ 94 (160)
T Consensus 30 r~~lIVGIDPG~-ttgiAildLdG~~---l~~~S~R~--~~~~evi~~I~~~G~P-viVAt----D--V~p~P~~V~Kia 96 (138)
T pfam04312 30 RRYLIVGIDPGI-TTGIAILDLDGEV---LDLYSSRN--MDRGEVIELIYELGKP-VIVAT----D--VSPPPETVKKIA 96 (138)
T ss_pred CCCEEEEECCCC-EEEEEEEECCCCE---EEEEECCC--CCHHHHHHHHHHCCCE-EEEEE----C--CCCCCHHHHHHH
T ss_conf 676799978991-4378898258849---98770367--9989999999974976-99982----6--989828999999
Q ss_pred HHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 999840489977998367167999999998698644546437899899
Q gi|254780976|r 95 HNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAAA 142 (160)
Q Consensus 95 ~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k~~iD~~AA~ 142 (160)
T Consensus 97 ~~-----f~A~ly~P~~dl~veEK~~l~~~~~~~~~n-~HeRDALaAA 138 (138)
T pfam04312 97 RS-----FGAVLYTPERDLSVEEKRELARKYSWKYDD-DHERDALAAA 138 (138)
T ss_pred HH-----HCCEEECCCCCCCHHHHHHHHHHHCCCCCC-CHHHHHHHCC
T ss_conf 97-----198115788767689999999871776799-4366564239