HHsearch alignment of GI: 254780976 and MMDB domain: 1hjr_A_
>1hjr_A (A:) Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli}
Probab=97.97 E-value=0.00034 Score=45.66 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECC--CEEEECCCC------CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH-HH
Q ss_conf 839999868876899963076511012--101104774------156898999986516775899721357888884-47
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHP--RPFLVRKKV------TQTALELLSFITTENIAAFIIGLPLNMNGSEGP-RV 87 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~P--l~~i~~~~~------~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~-~~ 87 (160)
.||||||+|+.++|+|+-|..+.-... .+++..+.. ......+.+++++|+|+.++|=-|.-..+..+- ..
T Consensus 1 ~rvLgiDpg~~~tG~av~~~~~~~~~~i~~g~i~~~~~~~~~R~~~i~~~l~~~l~~~~p~~v~iE~~~~~~~~~s~~~l 80 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKL 80 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHH
T ss_pred CEEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHH
T ss_conf 98999845778468999996699789999534845987779999999999999986359866999841221573578889
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 99999999998404899779983
Q gi|254780976|r 88 HSTRAFVHNMIDRKVYVPFVFWD 110 (160)
Q Consensus 88 ~~v~~f~~~L~~~~~~l~v~~~D 110 (160)
..+.--+.... ...++|+..+-
T Consensus 81 ~~~~G~i~~~~-~~~~ipi~~v~ 102 (158)
T 1hjr_A 81 GQARGVAIVAA-VNQELPVFEYA 102 (158)
T ss_dssp HHHHHHHHHHH-HTTTCCEEEEE
T ss_pred HHHHHHHHHHH-HHCCCEEEEEC
T ss_conf 99999999999-97597389976