HHsearch alignment of GI: 254780976 and MMDB domain: 1hjr_A_

>1hjr_A (A:) Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli}
Probab=97.97  E-value=0.00034  Score=45.66  Aligned_cols=93  Identities=14%  Similarity=0.091  Sum_probs=62.3

Q ss_pred             CCEEEEECCCCEEEEEEEECCCCEECC--CEEEECCCC------CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH-HH
Q ss_conf             839999868876899963076511012--101104774------156898999986516775899721357888884-47
Q gi|254780976|r   17 QPIASIDLGTKRIGLAISDPGRRFAHP--RPFLVRKKV------TQTALELLSFITTENIAAFIIGLPLNMNGSEGP-RV   87 (160)
Q Consensus        17 ~riLgiD~G~kriGiAisd~~~~~a~P--l~~i~~~~~------~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~-~~   87 (160)
                      .||||||+|+.++|+|+-|..+.-...  .+++..+..      ......+.+++++|+|+.++|=-|.-..+..+- ..
T Consensus         1 ~rvLgiDpg~~~tG~av~~~~~~~~~~i~~g~i~~~~~~~~~R~~~i~~~l~~~l~~~~p~~v~iE~~~~~~~~~s~~~l   80 (158)
T 1hjr_A            1 AIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKL   80 (158)
T ss_dssp             CEEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHH
T ss_pred             CEEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHH
T ss_conf             98999845778468999996699789999534845987779999999999999986359866999841221573578889


Q ss_pred             HHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf             99999999998404899779983
Q gi|254780976|r   88 HSTRAFVHNMIDRKVYVPFVFWD  110 (160)
Q Consensus        88 ~~v~~f~~~L~~~~~~l~v~~~D  110 (160)
                      ..+.--+.... ...++|+..+-
T Consensus        81 ~~~~G~i~~~~-~~~~ipi~~v~  102 (158)
T 1hjr_A           81 GQARGVAIVAA-VNQELPVFEYA  102 (158)
T ss_dssp             HHHHHHHHHHH-HTTTCCEEEEE
T ss_pred             HHHHHHHHHHH-HHCCCEEEEEC
T ss_conf             99999999999-97597389976