Query gi|254780976|ref|YP_003065389.1| Holliday junction resolvase YqgF [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 160
No_of_seqs 112 out of 1903
Neff 6.3
Searched_HMMs 33803
Date Wed Jun 1 19:57:57 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780976.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1nu0_A Hypothetical protein Y 100.0 3E-40 8.4E-45 263.8 10.9 136 16-152 2-137 (138)
2 >1vhx_A Putative holliday junc 100.0 2.1E-36 6.2E-41 240.5 15.5 144 16-160 2-147 (150)
3 >1iv0_A Hypothetical protein; 100.0 4.3E-29 1.3E-33 196.3 8.5 98 17-116 1-98 (98)
4 >3bzc_A TEX; helix-turn-helix, 99.9 1.2E-24 3.5E-29 169.4 12.6 131 15-155 2-136 (142)
5 >1hjr_A Holliday junction reso 98.0 0.00034 9.9E-09 45.7 12.6 93 17-110 1-102 (158)
6 >1sz2_A Glucokinase, glucose k 97.0 0.0015 4.6E-08 41.7 5.5 108 12-120 9-120 (141)
7 >2gup_A ROK family protein; su 96.7 0.0038 1.1E-07 39.3 5.6 106 16-122 3-114 (134)
8 >3eo3_A Bifunctional UDP-N-ace 96.3 0.026 7.6E-07 34.3 7.9 110 12-122 15-141 (163)
9 >3lm2_A Putative kinase; struc 96.1 0.014 4.2E-07 35.8 5.7 92 15-109 4-98 (99)
10 >2hoe_A N-acetylglucosamine ki 96.0 0.048 1.4E-06 32.6 8.1 130 17-154 2-148 (149)
11 >2ch5_A NAGK protein; transfer 96.0 0.074 2.2E-06 31.5 9.0 100 17-120 6-119 (153)
12 >2e2o_A Hexokinase; acetate an 95.9 0.072 2.1E-06 31.6 8.6 97 16-120 1-104 (130)
13 >2ap1_A Putative regulator pro 95.7 0.07 2.1E-06 31.6 7.8 105 10-115 17-133 (143)
14 >2kho_A Heat shock protein 70; 95.2 0.082 2.4E-06 31.2 6.9 95 16-120 1-137 (163)
15 >3epq_A Putative fructokinase; 94.3 0.2 6E-06 28.8 7.0 105 16-122 2-117 (147)
16 >2aa4_A Mannac kinase, putativ 94.0 0.13 3.9E-06 30.0 5.5 105 17-122 1-116 (134)
17 >2qm1_A Glucokinase; alpha-bet 93.7 0.15 4.5E-06 29.6 5.3 109 14-123 3-129 (150)
18 >1jce_A ROD shape-determining 93.5 0.35 1E-05 27.4 7.0 32 16-47 2-33 (175)
19 >2q2r_A Glucokinase 1, putativ 93.4 0.079 2.3E-06 31.3 3.4 110 14-124 26-150 (170)
20 >1yuw_A Heat shock cognate 71 92.5 0.12 3.5E-06 30.3 3.3 24 15-38 2-25 (215)
21 >1z6r_A MLC protein; transcrip 92.4 0.55 1.6E-05 26.2 6.6 94 16-110 2-112 (112)
22 >1dkg_D Molecular chaperone DN 91.9 0.12 3.5E-06 30.3 2.7 64 16-79 1-105 (161)
23 >2v7y_A Chaperone protein DNAK 90.9 0.29 8.4E-06 27.9 3.9 27 16-42 1-27 (183)
24 >1hux_A Activator of (R)-2-hyd 90.7 1.3 3.8E-05 24.0 7.0 75 17-91 3-88 (127)
25 >3htv_A D-allose kinase, allok 89.8 1.5 4.4E-05 23.6 8.7 130 15-151 5-150 (156)
26 >1zc6_A Probable N-acetylgluco 89.4 1.6 4.8E-05 23.4 9.7 120 12-149 6-137 (147)
27 >3i33_A Heat shock-related 70 89.4 0.34 1E-05 27.5 3.2 27 16-42 22-48 (230)
28 >2gel_A Putative GRAM negative 85.8 2.6 7.8E-05 22.1 11.5 100 17-122 1-107 (135)
29 >2fp4_B Succinyl-COA ligase [G 85.4 2.8 8.2E-05 22.0 7.5 92 34-129 41-132 (152)
30 >1wb9_A DNA mismatch repair pr 84.5 2.7 8E-05 22.0 5.6 115 16-154 7-126 (166)
31 >2nu8_B SCS-beta, succinyl-COA 84.3 3.1 9.2E-05 21.7 7.8 91 35-129 41-131 (151)
32 >3djc_A Type III pantothenate 83.3 3.4 0.0001 21.4 9.8 62 16-77 1-67 (147)
33 >1qgo_A CBIK protein, anaerobi 78.9 4.7 0.00014 20.6 5.1 57 67-128 5-61 (106)
34 >3cet_A Conserved archaeal pro 76.9 5.6 0.00017 20.1 7.5 121 18-149 1-129 (137)
35 >2a6a_A Hypothetical protein T 76.2 5.9 0.00017 20.0 11.5 97 9-112 5-106 (149)
36 >3h3n_X Glycerol kinase; ATP-b 74.6 6.4 0.00019 19.7 6.3 28 13-40 1-28 (107)
37 >2ews_A Pantothenate kinase; P 71.5 7.6 0.00023 19.3 6.9 54 14-74 17-70 (120)
38 >1kcf_A Hypothetical 30.2 KD p 69.6 8.4 0.00025 19.1 7.0 73 12-84 35-127 (258)
39 >3cx3_A Lipoprotein; zinc-bind 68.9 8.7 0.00026 19.0 5.8 65 59-129 11-76 (85)
40 >3en9_A Glycoprotease, O-sialo 68.8 8.7 0.00026 19.0 8.4 120 15-151 4-141 (165)
41 >3i8b_A Xylulose kinase; strai 67.9 9.1 0.00027 18.8 8.9 96 17-117 5-132 (163)
42 >2o8b_A DNA mismatch repair pr 67.9 9.1 0.00027 18.8 8.0 124 16-153 9-146 (153)
43 >3ifr_A Carbohydrate kinase, F 67.8 6.5 0.00019 19.7 3.7 29 12-40 2-30 (242)
44 >1z05_A Transcriptional regula 67.4 9.3 0.00028 18.8 5.2 93 17-110 3-111 (111)
45 >2ivn_A O-sialoglycoprotein en 67.2 9.4 0.00028 18.7 10.9 95 17-120 1-112 (166)
46 >1woq_A Inorganic polyphosphat 67.0 9.5 0.00028 18.7 6.1 101 11-112 6-124 (143)
47 >3gbt_A Gluconate kinase; LBA0 64.9 8 0.00024 19.2 3.6 51 15-65 2-62 (237)
48 >1mjh_A Protein (ATP-binding d 64.4 11 0.00032 18.4 4.5 57 53-114 106-162 (162)
49 >3g25_A Glycerol kinase; IDP00 62.5 11 0.00033 18.3 4.0 26 15-40 4-29 (109)
50 >2h3g_X Biosynthetic protein; 62.4 12 0.00034 18.2 10.4 100 19-128 2-108 (121)
51 >2pn1_A Carbamoylphosphate syn 62.1 6.6 0.00019 19.7 2.8 58 11-75 23-80 (104)
52 >3eno_A Putative O-sialoglycop 60.8 12 0.00037 18.0 10.6 91 15-110 4-111 (173)
53 >3d2f_A Heat shock protein hom 59.8 10 0.0003 18.5 3.4 79 16-115 1-80 (220)
54 >2vgn_A DOM34; translation ter 58.6 14 0.0004 17.8 4.4 101 17-124 5-127 (141)
55 >2dpn_A Glycerol kinase; therm 58.3 12 0.00035 18.1 3.6 32 16-47 1-36 (241)
56 >3jvp_A Ribulokinase; PSI-II, 55.6 15 0.00045 17.5 4.5 30 13-42 1-32 (224)
57 >2w40_A Glycerol kinase, putat 53.9 15 0.00044 17.5 3.5 25 16-40 3-27 (110)
58 >3g23_A Peptidase U61, LD-carb 53.6 13 0.00038 17.9 3.1 43 66-109 60-102 (107)
59 >2vk2_A YTFQ, ABC transporter 53.2 17 0.00049 17.2 5.9 82 25-117 1-97 (134)
60 >2d4w_A Glycerol kinase; alpha 51.6 17 0.00051 17.1 3.5 23 18-40 3-25 (244)
61 >1pq4_A Periplasmic binding pr 49.9 19 0.00056 16.9 3.6 63 59-128 12-74 (82)
62 >1twd_A Copper homeostasis pro 45.3 22 0.00066 16.5 7.6 83 40-129 50-144 (256)
63 >3bex_A Type III pantothenate 44.0 23 0.00069 16.4 7.2 88 17-114 3-93 (134)
64 >2pfs_A USP, universal stress 43.4 24 0.0007 16.3 4.5 52 54-111 96-147 (150)
65 >2hmc_A AGR_L_411P, dihydrodip 42.5 25 0.00073 16.2 7.9 61 50-113 101-161 (235)
66 >2zf5_O Glycerol kinase; hyper 42.0 25 0.00074 16.2 3.5 24 17-40 3-26 (238)
67 >3l0q_A Xylulose kinase; xlylu 38.8 28 0.00083 15.9 3.8 26 15-40 3-28 (297)
68 >2z08_A Universal stress prote 38.8 28 0.00083 15.9 3.6 51 54-109 86-136 (137)
69 >3gi1_A LBP, laminin-binding p 36.3 31 0.00091 15.6 5.8 63 61-128 14-76 (109)
70 >2dum_A Hypothetical protein P 35.8 31 0.00093 15.6 4.5 59 54-117 104-162 (170)
71 >1nbw_A Glycerol dehydratase r 35.7 31 0.00093 15.6 3.2 60 16-75 1-74 (124)
72 >3cym_A Uncharacterized protei 34.0 33 0.00099 15.4 3.5 64 6-73 27-99 (219)
73 >3hh8_A Metal ABC transporter 33.4 34 0.001 15.4 5.2 64 61-129 16-79 (115)
74 >1xvl_A Mn transporter, MNTC p 32.7 35 0.001 15.3 5.5 65 59-128 13-77 (90)
75 >1t6c_A Exopolyphosphatase; al 32.5 36 0.0011 15.3 8.5 92 13-111 8-119 (153)
76 >3hz6_A Xylulokinase; xylulose 31.7 37 0.0011 15.2 5.9 33 16-48 4-40 (241)
77 >2o1e_A YCDH; alpha-beta prote 31.0 38 0.0011 15.1 6.0 66 58-128 10-75 (82)
78 >2jfq_A Glutamate racemase; ce 31.0 38 0.0011 15.1 4.6 121 15-151 21-163 (174)
79 >3fkq_A NTRC-like two-domain p 30.9 23 0.00067 16.4 1.4 50 26-75 19-76 (138)
80 >2vvt_A Glutamate racemase; is 30.2 39 0.0011 15.0 4.9 87 53-151 72-166 (179)
81 >2gm3_A Unknown protein; AT3G0 28.7 41 0.0012 14.9 5.9 57 54-115 111-167 (175)
82 >2o8b_B DNA mismatch repair pr 28.6 41 0.0012 14.9 5.9 55 17-75 10-71 (192)
83 >1hyo_A Fumarylacetoacetate hy 27.4 29 0.00084 15.8 1.4 16 23-38 28-43 (121)
84 >1k7c_A Rhamnogalacturonan ace 27.4 28 0.00082 15.9 1.4 57 51-110 109-168 (168)
85 >1ig8_A Hexokinase PII, hexoki 26.7 45 0.0013 14.7 4.4 53 16-68 5-70 (165)
86 >1e4f_T Cell division protein 25.9 46 0.0014 14.6 8.8 89 11-108 2-106 (108)
87 >3fdx_A Putative filament prot 25.7 47 0.0014 14.5 3.3 21 55-75 94-114 (143)
88 >2qi2_A Pelota, cell division 24.3 50 0.0015 14.4 6.4 94 18-123 6-105 (112)
89 >2gzm_A Glutamate racemase; en 23.8 51 0.0015 14.3 4.6 98 42-151 40-144 (156)
90 >2ioy_A Periplasmic sugar-bind 23.4 52 0.0015 14.3 6.8 80 26-116 1-95 (150)
91 >2itm_A Xylulose kinase, xylul 23.1 52 0.0016 14.2 6.5 58 19-76 2-74 (231)
92 >2zgy_A Plasmid segregation pr 22.7 53 0.0016 14.2 3.6 21 19-39 2-22 (164)
93 >2dwu_A Glutamate racemase; is 22.4 54 0.0016 14.1 4.1 97 42-151 44-146 (164)
94 >3fg9_A Protein of universal s 22.1 55 0.0016 14.1 2.6 20 56-75 95-114 (143)
95 >1tq8_A Hypothetical protein R 20.9 58 0.0017 14.0 3.1 25 68-98 17-41 (128)
96 >2kt9_A Probable 30S ribosomal 20.4 60 0.0018 13.9 5.2 51 15-65 7-57 (116)
97 >3js6_A Uncharacterized PARM p 20.3 60 0.0018 13.9 2.3 26 16-41 3-28 (214)
98 >2qxy_A Response regulator; re 20.2 60 0.0018 13.9 6.2 62 56-126 37-98 (142)
No 1
>>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} (A:)
Probab=100.00 E-value=3e-40 Score=263.84 Aligned_cols=136 Identities=29% Similarity=0.385 Sum_probs=131.5
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 98399998688768999630765110121011047741568989999865167758997213578888844799999999
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVH 95 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~ 95 (160)
++|+||||||+||||+|+||+.+.+|+|++++.+++..+.+..|..++++|+++.||||+|++++|+++++++.++.|++
T Consensus 2 ~krilgiD~G~kriGiAi~d~~~~ia~p~~~i~~~~~~~~~~~l~~li~~~~~~~iViGlP~~~~g~~~~~a~~v~~f~~ 81 (138)
T 1nu0_A 2 SGTLXAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNXDGTEQPLTARARKFAN 81 (138)
T ss_dssp CCEEEEEECCSSEEEEEEEETTTTEEEEEEEEEEETTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 97689999179979999947998740140789816772689999998642487389964434777875789999999999
Q ss_pred HHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998404899779983671679999999986986445464378998999999999686
Q gi|254780976|r 96 NMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAAALILQEVLDRI 152 (160)
Q Consensus 96 ~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k~~iD~~AA~iILq~~Ld~~ 152 (160)
.|. +.+++||++||||+||++|++.+.+.+++++++++.+|++||++|||+|||+.
T Consensus 82 ~L~-~~~~l~v~~vDEr~TT~~A~~~l~~~~~~~~~~k~~iD~~AA~~ILq~~L~~~ 137 (138)
T 1nu0_A 82 RIH-GRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYXEQG 137 (138)
T ss_dssp HHH-HHHCCCEEEEEEECCCCCC-------CCCCCCCHHHHTTHHHHHHHHHHHHTT
T ss_pred HHH-HHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 999-86299969973664599999999973563210454364999999999999736
No 2
>>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} (A:)
Probab=100.00 E-value=2.1e-36 Score=240.55 Aligned_cols=144 Identities=35% Similarity=0.490 Sum_probs=133.0
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCC--CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 983999986887689996307651101210110477--415689899998651677589972135788888447999999
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKK--VTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAF 93 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~--~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f 93 (160)
++||||||||++|||+|++|+.+.+++|+.++.++. ....+..|.+++++|+|+.+|||+|++++|++++++..++.|
T Consensus 2 ~mriLgiD~G~~riG~Av~d~~~~~a~~l~~i~~~~~~~~~~~~~L~~ii~~~~~~~iviG~p~~~~g~~~~~~~~~~~~ 81 (150)
T 1vhx_A 2 SLRILGLDLGTKTLGVALSDEXGWTAQGIETIKINEAEGDYGLSRLSELIKDYTIDKIVLGFPKNXNGTVGPRGEASQTF 81 (150)
T ss_dssp CEEEEEEEECSSEEEEEEECTTSSSEEEEEEEECBGGGTBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHH
T ss_pred CCEEEEEEECCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 84399999279989999973898843560446503456226899999999763436288516423477621788999999
Q ss_pred HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 9999840489977998367167999999998698644546437899899999999968645662288
Q gi|254780976|r 94 VHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAAALILQEVLDRISFLESSKG 160 (160)
Q Consensus 94 ~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k~~iD~~AA~iILq~~Ld~~~~~~~~~~ 160 (160)
+..+. +.+++||++|||||||.+|++.+...|.+++++++.+|++||++|||+||++.+...+..|
T Consensus 82 ~~~l~-~~~~i~v~~~dE~~ss~~a~~~l~~~g~~~k~~k~~~D~~aA~~ILq~~L~~~~~~~~~~~ 147 (150)
T 1vhx_A 82 AKVLE-TTYNVPVVLWDERLTTXAAEKXLIAADVSRQKRKKVIDKXAAVXILQGYLDSLNEGGSHHH 147 (150)
T ss_dssp HHHHH-HHHCSCEEEECCSSCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHC-CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99735-5778327984155579999999997599700034147699999999999987627687665
No 3
>>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} (A:)
Probab=99.96 E-value=4.3e-29 Score=196.33 Aligned_cols=98 Identities=32% Similarity=0.569 Sum_probs=94.0
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 83999986887689996307651101210110477415689899998651677589972135788888447999999999
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHN 96 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~ 96 (160)
.|+||||||+||||+|+||+.+.+|+|++++.+++..+.+..|.+++++|+++.||||+|++++|+++++++.++.|+++
T Consensus 1 MrilgiD~G~kriGvAi~d~~~~~a~pl~~i~~~~~~~~~~~l~~li~~~~v~~iVvGlP~~~~g~~~~~~~~i~~f~~~ 80 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEA 80 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCCSSCCCEEEEECCCHHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHH
T ss_pred CCEEEEEECCCEEEEEEECCCCCEEECEEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 92999980899899999259998781678898678658999999999873625078168977899918899999999999
Q ss_pred HHHHCCCCCEEEECCCCCHH
Q ss_conf 98404899779983671679
Q gi|254780976|r 97 MIDRKVYVPFVFWDERLTTV 116 (160)
Q Consensus 97 L~~~~~~l~v~~~DEr~TS~ 116 (160)
|. .+++||++|||||||+
T Consensus 81 l~--~~~i~v~~~DEr~SSk 98 (98)
T 1iv0_A 81 LR--ARGVEVELWDERFTTK 98 (98)
T ss_dssp HH--HTTCEEEEECCSCCCC
T ss_pred HH--HCCCCEEEECCCCCCC
T ss_conf 86--4799899987898888
No 4
>>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} (A:326-467)
Probab=99.92 E-value=1.2e-24 Score=169.43 Aligned_cols=131 Identities=15% Similarity=0.152 Sum_probs=109.6
Q ss_pred CCCCEEEEECCCC-EEEEEEEECCCCEECCCEEE---ECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHH
Q ss_conf 9983999986887-68999630765110121011---0477415689899998651677589972135788888447999
Q gi|254780976|r 15 PNQPIASIDLGTK-RIGLAISDPGRRFAHPRPFL---VRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHST 90 (160)
Q Consensus 15 ~~~riLgiD~G~k-riGiAisd~~~~~a~Pl~~i---~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v 90 (160)
.+.||||||||+| |||+|++|+.+.++.|..++ ...+.+.++..|.+++++|+|..+||| +|+++++++.+
T Consensus 2 ~~~rilaiD~G~k~riG~A~~d~~g~i~~~~~~~~~~~~~~~~~~~~~l~~li~~~~~~~iViG-----~g~~~~~~~~~ 76 (142)
T 3bzc_A 2 GPRATLGLDPGLRTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIG-----NGTASRETDKL 76 (142)
T ss_dssp CSCCEEEEECCSSSCEEEEEECTTSCEEEEEEECCSGGGCCHHHHHHHHHHHHHHHTCCEEEEE-----SSTTHHHHHHH
T ss_pred CCCEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC-----CCCHHHHHHHH
T ss_conf 9971677679986625999998999878867875689544499999999999998199289988-----98135899999
Q ss_pred HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998404899779983671679999999986986445464378998999999999686456
Q gi|254780976|r 91 RAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAAALILQEVLDRISFL 155 (160)
Q Consensus 91 ~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k~~iD~~AA~iILq~~Ld~~~~~ 155 (160)
+.|+..+ .+.+++||++|||++||.+|.+....... ++...|..+|+.|++.|+|.++..
T Consensus 77 ~~~~~~l-~~~~~i~V~~vDE~~st~~a~~~~~~~~~----~~~~~d~~~Av~i~~~l~d~L~e~ 136 (142)
T 3bzc_A 77 AGELIKK-YPGMKLTKIMVSEAGASVYSASELAAKEF----PELDVSLRGAVSIARRLQDPLAEL 136 (142)
T ss_dssp HHHHHHH-CGGGCCEEEEECCHHHHHHHHSHHHHHHC----TTSCHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHH-CCCCCCEEEEECCHHHHHHHCCHHHHHHC----CCCCHHHHHHHHHHHHCCCHHHHH
T ss_conf 9999986-76788628993332478876188988557----578830778888888603969999
No 5
>>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} (A:)
Probab=97.97 E-value=0.00034 Score=45.66 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=62.3
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECC--CEEEECCCC------CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH-HH
Q ss_conf 839999868876899963076511012--101104774------156898999986516775899721357888884-47
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHP--RPFLVRKKV------TQTALELLSFITTENIAAFIIGLPLNMNGSEGP-RV 87 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~P--l~~i~~~~~------~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~-~~ 87 (160)
.||||||+|+.++|+|+-|..+.-... .+++..+.. ......+.+++++|+|+.++|=-|.-..+..+- ..
T Consensus 1 ~rvLgiDpg~~~tG~av~~~~~~~~~~i~~g~i~~~~~~~~~R~~~i~~~l~~~l~~~~p~~v~iE~~~~~~~~~s~~~l 80 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKL 80 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHH
T ss_pred CEEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHH
T ss_conf 98999845778468999996699789999534845987779999999999999986359866999841221573578889
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 99999999998404899779983
Q gi|254780976|r 88 HSTRAFVHNMIDRKVYVPFVFWD 110 (160)
Q Consensus 88 ~~v~~f~~~L~~~~~~l~v~~~D 110 (160)
..+.--+.... ...++|+..+-
T Consensus 81 ~~~~G~i~~~~-~~~~ipi~~v~ 102 (158)
T 1hjr_A 81 GQARGVAIVAA-VNQELPVFEYA 102 (158)
T ss_dssp HHHHHHHHHHH-HTTTCCEEEEE
T ss_pred HHHHHHHHHHH-HHCCCEEEEEC
T ss_conf 99999999999-97597389976
No 6
>>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} (A:1-122,A:314-332)
Probab=96.98 E-value=0.0015 Score=41.66 Aligned_cols=108 Identities=7% Similarity=0.008 Sum_probs=74.1
Q ss_pred HCCCCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHH--HCCCEEEEEECCCCCCC--CCHHH
Q ss_conf 358998399998688768999630765110121011047741568989999865--16775899721357888--88447
Q gi|254780976|r 12 SLKPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITT--ENIAAFIIGLPLNMNGS--EGPRV 87 (160)
Q Consensus 12 ~~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e--~~i~~iVvGlP~~~~g~--~~~~~ 87 (160)
.++....+||+|.|..++=+|+.|..+..-.....+...........+.+++++ ..+.++.||.|=-.++. .++..
T Consensus 9 ~~p~~~~~lgiDIGgT~i~~al~d~~g~~i~~~~~~~t~~~~~~~~~i~~ii~~~~~~i~~igI~~pG~Vd~~~~~~~n~ 88 (141)
T 1sz2_A 9 HHGSTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAXTNH 88 (141)
T ss_dssp -----CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHSCCCCCEEEEEESSCCCSSEECCSSS
T ss_pred CCCCCCEEEEEEECCHHHHHEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCEEEEEC
T ss_conf 57843389999978054325469899998968888789987689999999998669987658999346732881146521
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH
Q ss_conf 999999999984048997799836716799999
Q gi|254780976|r 88 HSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQ 120 (160)
Q Consensus 88 ~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~ 120 (160)
.....+.+.| ++.+++||++.+.--....|+.
T Consensus 89 ~w~~~l~~~L-~~~~g~pV~ieNDanaaalaE~ 120 (141)
T 1sz2_A 89 TWAFSIAEXK-KNLGFSHLEIINDFTAVSXAIP 120 (141)
T ss_dssp CCCEEHHHHH-HHHTCSEEEEEEHHHHHHHHGG
T ss_pred CCCCCHHHHH-HCCCCCEEEEECCCCHHHHHHH
T ss_conf 3367878887-4225636886113120326655
No 7
>>2gup_A ROK family protein; sugar kinase, APC80695, sucrose, structural genomics, PSI, protein structure initiative; HET: SUC; 2.01A {Streptococcus pneumoniae TIGR4} (A:1-114,A:273-292)
Probab=96.70 E-value=0.0038 Score=39.32 Aligned_cols=106 Identities=13% Similarity=0.118 Sum_probs=74.9
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH-----HHHH-
Q ss_conf 9839999868876899963076511012101104774156898999986516775899721357888884-----4799-
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGP-----RVHS- 89 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~-----~~~~- 89 (160)
...++|+|+|..++-+|+.|..+.+-.-..+-...........+.++++++++.++.+|+|=-.+...+. ....
T Consensus 3 ~~~~igidIg~~~i~~~lvd~~g~il~~~~~~~~~~~~~i~~~i~~~~~~~~i~gIgia~pG~vd~~~g~v~~~~~~~w~ 82 (134)
T 2gup_A 3 AXTIATIDIGGTGIKFASLTPDGKILDKTSISTPENLEDLLAWLDQRLSEQDYSGIAXSVPGAVNQETGVIDGFSAVPYI 82 (134)
T ss_dssp -CCEEEEEEETTEEEEEEECTTCCEEEEEEECCCSSHHHHHHHHHHHHTTSCCSEEEEEESSEECTTTCBEESCCSSGGG
T ss_pred CCEEEEEEECCHHEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCCC
T ss_conf 88999999870037999990899699999971887699999999998654467579985404254022222353322235
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 999999998404899779983671679999999
Q gi|254780976|r 90 TRAFVHNMIDRKVYVPFVFWDERLTTVSAQQIL 122 (160)
Q Consensus 90 v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l 122 (160)
-..+.+.| ++.+++||++.++--...-|+...
T Consensus 83 ~~~l~~~L-~~~~g~PV~i~NDa~aaAlgE~~~ 114 (134)
T 2gup_A 83 HGFSWYEA-LSSYQLPVHLENDANCVGLSELLA 114 (134)
T ss_dssp SSSBHHHH-TGGGCCCEEEEEHHHHHHHHHHHH
T ss_pred CCCCHHHH-HHCCCCCEEEECCHHHHHHHHHHC
T ss_conf 88742333-204896189822211667766530
No 8
>>3eo3_A Bifunctional UDP-N-acetylglucosamine 2- epimerase/N-acetylmannosamine kinase; non-protein kinase, sialic acid biosynthesis; 2.84A {Homo sapiens} (A:1-144,A:315-333)
Probab=96.31 E-value=0.026 Score=34.26 Aligned_cols=110 Identities=12% Similarity=0.080 Sum_probs=65.8
Q ss_pred HCCCCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHH----HH-----HCCCEEEEEECCCCC--
Q ss_conf 3589983999986887689996307651101210110477415689899998----65-----167758997213578--
Q gi|254780976|r 12 SLKPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFI----TT-----ENIAAFIIGLPLNMN-- 80 (160)
Q Consensus 12 ~~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii----~e-----~~i~~iVvGlP~~~~-- 80 (160)
.++.+..++|||+|..++-+++.|..+.+-.-...-...+.+..+..+...+ ++ ..+.+|-++.|-..+
T Consensus 15 ~l~~~~~vlgIdiG~t~i~~~l~D~~G~iia~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gIgis~pg~v~~~ 94 (163)
T 3eo3_A 15 YFQGTLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPR 94 (163)
T ss_dssp ----CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEC-------
T ss_pred CCCCCEEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
T ss_conf 26887028999977111999999499979999996899987899999999999999986213684568984156432123
Q ss_pred -CCCCHHH-----HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
Q ss_conf -8888447-----99999999998404899779983671679999999
Q gi|254780976|r 81 -GSEGPRV-----HSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQIL 122 (160)
Q Consensus 81 -g~~~~~~-----~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l 122 (160)
|...... -.-..+.+.| ++.+++||++.++--....|+...
T Consensus 95 ~g~i~~~~~~~~~~~~~~l~~~l-~~~~~~pV~i~NDa~~aalaE~~~ 141 (163)
T 3eo3_A 95 EGIVLHSTKLIQEWNSVDLRTPL-SDTLHLPVWVDNDGNCAALAERKF 141 (163)
T ss_dssp -----------------CCHHHH-HHHHCSCEEEECHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHH-HHHCCCCEEEECCCCCHHHHHHHH
T ss_conf 31001333345543233116777-650278667404432123899861
No 9
>>3lm2_A Putative kinase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, transferase; HET: MSE; 1.70A {Agrobacterium tumefaciens} (A:1-99)
Probab=96.08 E-value=0.014 Score=35.81 Aligned_cols=92 Identities=12% Similarity=0.140 Sum_probs=62.5
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCC--CCCCCHHHHHHHH
Q ss_conf 99839999868876899963076511012101104774156898999986516775899721357--8888844799999
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNM--NGSEGPRVHSTRA 92 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~--~g~~~~~~~~v~~ 92 (160)
.++.+||+|+|-.+|=+|+.|..+.+-.|-..- .+.+..+..+.+.+++..+.++-||.|=.. +...-..+.....
T Consensus 4 ~~~~vlgiDiGgt~i~~~v~d~~g~i~~~t~~~--~~~~~~~~~i~~~i~~~~~~~Igig~pG~vd~~~g~~~~~~~~~~ 81 (99)
T 3lm2_A 4 EDQTVLAIDIGGSHVKIGLSTDGEERKVESGKT--XTGPEXVAAVTAXAKDXTYDVIAXGYPGPVVHNKPLREPVNLGEG 81 (99)
T ss_dssp GGCCEEEEEECSSEEEEEETTTCCEEEEECCTT--CCHHHHHHHHHHHTTTCCCSEEEEEESSCEETTEECSCCTTSCSC
T ss_pred CCCEEEEEEECCCEEEEEEEECCCCEEEEECCC--CCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEECCCCCCC
T ss_conf 789899999788559999996998799970799--997999999999997479983999957699589389978877853
Q ss_pred H-HHHHHHHCCCCCEEEE
Q ss_conf 9-9999840489977998
Q gi|254780976|r 93 F-VHNMIDRKVYVPFVFW 109 (160)
Q Consensus 93 f-~~~L~~~~~~l~v~~~ 109 (160)
+ ...| ++.+++||.+-
T Consensus 82 w~~~~l-~~~lg~pV~ie 98 (99)
T 3lm2_A 82 WVGYDY-EGAFGRPVRIV 98 (99)
T ss_dssp CTTCCH-HHHHTSCEEEE
T ss_pred CCCCCH-HHHCCCCEEEE
T ss_conf 458786-78269858992
No 10
>>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics, JCSG; 2.46A {Thermotoga maritima} (A:86-211,A:358-380)
Probab=96.01 E-value=0.048 Score=32.62 Aligned_cols=130 Identities=10% Similarity=0.080 Sum_probs=79.7
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEE-EC-CCCCHHHHHH----HHHHHH-----HCCCEEEEEECCCCCCCCCH
Q ss_conf 8399998688768999630765110121011-04-7741568989----999865-----16775899721357888884
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFL-VR-KKVTQTALEL----LSFITT-----ENIAAFIIGLPLNMNGSEGP 85 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i-~~-~~~~~~~~~l----~~ii~e-----~~i~~iVvGlP~~~~g~~~~ 85 (160)
+.+||+|+|..++-+++.|..+.+-.....- +. .+....+..+ .+++++ ..+.++-++.|=..+...+.
T Consensus 2 ~y~lGIdiG~t~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gIgia~pG~V~~~~~~ 81 (149)
T 2hoe_A 2 AYVLGIEVTRDEIAACLIDASXNILAHEAHPLPSQSDREETLNVXYRIIDRAKDXXEKLGSKLSALTVAAPGPIDTERGI 81 (149)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTE
T ss_pred CCEEEEEECCCEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCE
T ss_conf 71257899898899999928998998764327777898999999999999999986531785246740322205347408
Q ss_pred -----HHHHH-HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----47999-9999999840489977998367167999999998698644546437899899999999968645
Q gi|254780976|r 86 -----RVHST-RAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAAALILQEVLDRISF 154 (160)
Q Consensus 86 -----~~~~v-~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k~~iD~~AA~iILq~~Ld~~~~ 154 (160)
..... ..+...+ ++.+++||.+.++--...-|+..+...- -.+---||+--|++||++...
T Consensus 82 ~~~~~~~~w~~~~~~~~l-~~~~~~pv~v~NDa~~~alaE~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~ 148 (149)
T 2hoe_A 82 IIDPRNFPLSQIPLANLL-KEKYGIEVWVENDADXGAVGEKWYTKRE-------PVIAFGAAVHALENYLERVTT 148 (149)
T ss_dssp ECCCSSCTTBTSCHHHHH-HHHHCSEEEEEEHHHHHHHHHHHHTTCS-------CHHHHHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCCCCHHHHH-HHHHCCCEEEECCCHHHHHHHHHHCCCC-------CHHHHHHHHHHHHHHHHHHHC
T ss_conf 973454564688478899-9874753343034058898777532788-------399999999999999998756
No 11
>>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, ribonuclease H fold, sugar kinase/HSP70/actin superfamily, domain rotation; HET: NAG NDG; 1.9A {Homo sapiens} (A:1-119,A:314-347)
Probab=96.01 E-value=0.074 Score=31.50 Aligned_cols=100 Identities=3% Similarity=-0.040 Sum_probs=62.6
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEEC----CCEEEECCCCCHHHHHHHHHHH----------HHCCCEEEEEECCCCCCC
Q ss_conf 83999986887689996307651101----2101104774156898999986----------516775899721357888
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAH----PRPFLVRKKVTQTALELLSFIT----------TENIAAFIIGLPLNMNGS 82 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~----Pl~~i~~~~~~~~~~~l~~ii~----------e~~i~~iVvGlP~~~~g~ 82 (160)
+-+||||.|..++=+++.|..+.+-. |.+.....+.+..+..+.+.++ .+.+..+-+|.|--.+..
T Consensus 6 ~~vLGIDiGgT~ir~~lvD~~G~ii~~~~~~~~~~~~~~~e~~~~~i~~~i~~~l~~~~~~~~~~I~~igig~~G~~~~~ 85 (153)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQED 85 (153)
T ss_dssp CEEEEEEECTTCEEEEEEETTSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHH
T ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCC
T ss_conf 78999990611028899959999999999368896658999999999999999999749997765566566652023732
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH
Q ss_conf 88447999999999984048997799836716799999
Q gi|254780976|r 83 EGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQ 120 (160)
Q Consensus 83 ~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~ 120 (160)
..........++ ..+++.||.++++.-....|+-
T Consensus 86 ---~~~~~~~~i~~~-~~~~~~pv~v~NDa~aaa~aE~ 119 (153)
T 2ch5_A 86 ---AGRILIEELRDR-FPYLSESYLITTDAAGSIATAT 119 (153)
T ss_dssp ---HHHHHHHHHHHH-CTTSBSCEEEEEHHHHHHHHHC
T ss_pred ---CCEEECCHHHHH-HCCCCCEEEEECHHHHHHHHCC
T ss_conf ---100302124443-1267862999265999986513
No 12
>>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuclease-H fold, sugar kinase, glucose, conformational change; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* (A:1-105,A:275-299)
Probab=95.92 E-value=0.072 Score=31.57 Aligned_cols=97 Identities=8% Similarity=0.046 Sum_probs=63.2
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCE----EEECCCCCHHHHHHHHHHHH---HCCCEEEEEECCCCCCCCCHHHH
Q ss_conf 983999986887689996307651101210----11047741568989999865---16775899721357888884479
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRP----FLVRKKVTQTALELLSFITT---ENIAAFIIGLPLNMNGSEGPRVH 88 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~----~i~~~~~~~~~~~l~~ii~e---~~i~~iVvGlP~~~~g~~~~~~~ 88 (160)
|+.++|||.|+.++-.++.|..+.+-.-.. .-........+..+.+.+.+ ..+..+-+|.|- .+.+.
T Consensus 1 M~~~iGIDiG~T~ira~l~D~~G~ii~~~~~~t~~~~e~~~~~i~~~i~~~i~~~~~~~~~~~gI~~~g-----i~~~~- 74 (130)
T 2e2o_A 1 MMIIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGEADVVGMGVAG-----LDSKF- 74 (130)
T ss_dssp CCCEEEEEECSSCEEEEEECTTSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSCCSEEEEEETT-----CCSHH-
T ss_pred CCEEEEEEECHHHEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC-----CCCCC-
T ss_conf 909999996500279999979998999999578997510499999999999997458987557883245-----67820-
Q ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH
Q ss_conf 99999999984048997799836716799999
Q gi|254780976|r 89 STRAFVHNMIDRKVYVPFVFWDERLTTVSAQQ 120 (160)
Q Consensus 89 ~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~ 120 (160)
-..+...+ +..+..|+.+|+..-+...|+.
T Consensus 75 -~~~l~~~l-~~~~~~Pv~l~NDaraaalaE~ 104 (130)
T 2e2o_A 75 -DWENFTPL-ASLIAPKVIIQHDGVIALFAET 104 (130)
T ss_dssp -HHHHHHHH-HTTSSSEEEEEEHHHHHHHHHH
T ss_pred -HHHHHHHH-HHCCCCCEEEECHHHHHHHHHC
T ss_conf -46899999-8535887899711789987530
No 13
>>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein structure initiative; 1.90A {Salmonella typhimurium} (A:1-128,A:313-327)
Probab=95.67 E-value=0.07 Score=31.63 Aligned_cols=105 Identities=11% Similarity=0.130 Sum_probs=65.9
Q ss_pred HHHCCCCCCEEEEECCCCEEEEEEEECCCCEECCCEEE-ECCCCCHHHHHHHHHHHH-----HCCCEEEEEECCCCCCCC
Q ss_conf 98358998399998688768999630765110121011-047741568989999865-----167758997213578888
Q gi|254780976|r 10 VKSLKPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFL-VRKKVTQTALELLSFITT-----ENIAAFIIGLPLNMNGSE 83 (160)
Q Consensus 10 ~~~~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i-~~~~~~~~~~~l~~ii~e-----~~i~~iVvGlP~~~~g~~ 83 (160)
....+....++|+|+|..++-+++.|..+.+-.-..+- +.......+..+.+.+.+ ..+.++.|+.|=..|...
T Consensus 17 l~~~~~~~~~igvdig~t~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~i~~Igia~pG~vd~~~ 96 (143)
T 2ap1_A 17 NLYFQSNAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETED 96 (143)
T ss_dssp ------CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTT
T ss_pred EEEECCCCEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
T ss_conf 25865898599999364669999990999899999997999999999999999999988863997279999678543343
Q ss_pred C-----HHHHH-HHHHHHHHHHHCCCCCEEEECCCCCH
Q ss_conf 8-----44799-99999999840489977998367167
Q gi|254780976|r 84 G-----PRVHS-TRAFVHNMIDRKVYVPFVFWDERLTT 115 (160)
Q Consensus 84 ~-----~~~~~-v~~f~~~L~~~~~~l~v~~~DEr~TS 115 (160)
+ +.... -.++.+.| ++.+++||.+.+...--
T Consensus 97 g~i~~~~~~~w~~~~l~~~l-~~~l~~PV~i~N~~~~~ 133 (143)
T 2ap1_A 97 GTLYAANVPAASGKPLRADL-SARLDRDVRLDNDAGGM 133 (143)
T ss_dssp SCCBCTTCTTTTTSCHHHHH-HHHHTSCEEEEETTHHH
T ss_pred CCCCCCCCCHHHCCCHHHHH-HHHHCCCCCCCCCHHHH
T ss_conf 33455311011014257677-66534652234385999
No 14
>>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} (A:1-73,A:115-182,A:364-385)
Probab=95.23 E-value=0.082 Score=31.23 Aligned_cols=95 Identities=19% Similarity=0.153 Sum_probs=54.0
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCE---------ECCCEEEECCCC-----------------------------CHHHH
Q ss_conf 9839999868876899963076511---------012101104774-----------------------------15689
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRF---------AHPRPFLVRKKV-----------------------------TQTAL 57 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~---------a~Pl~~i~~~~~-----------------------------~~~~~ 57 (160)
|+..+|||+|+.++.+|+.++.... ..|--+....+. ...+.
T Consensus 1 Ms~~iGIDfGTtnt~va~~~~~~~~~~~~~~~~~~~PS~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~Kr~liaa~~l~ 80 (163)
T 2kho_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIISAEVLK 80 (163)
T ss_dssp ---CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTHHHHHHH
T ss_pred CCCEEEEECCHHHEEEEEEECCEEEEEECCCCCEECCEEEEEECCCCEEECHHHHHHHHHCCCCCHHHHHHHCHHHHHHH
T ss_conf 99879998470338999998999899988999805667999978997996799998657684056567587639999999
Q ss_pred HHHHHHHHH---CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC-EEEECCCCCHHHHHH
Q ss_conf 899998651---677589972135788888447999999999984048997-799836716799999
Q gi|254780976|r 58 ELLSFITTE---NIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVP-FVFWDERLTTVSAQQ 120 (160)
Q Consensus 58 ~l~~ii~e~---~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~-v~~~DEr~TS~~A~~ 120 (160)
.|.+..+.+ .+..+|+..|-..+. .-+.+..+.. +..+++ +.++||- |..|-.
T Consensus 81 ~l~~~ae~~~~~~~~~~VitvP~~~~~-------~~r~~l~~aa-~~aG~~~~~li~EP--tAAAl~ 137 (163)
T 2kho_A 81 KMKKTAEDYLGEPVTEAVITVPAYFND-------AQRQATKDAG-RIAGLEVKRIINEP--TAAALA 137 (163)
T ss_dssp HHHHHHHHHHCSCCCEEEEEECTTCCH-------HHHHHHHHHH-HTTTCEEEEEEEHH--HHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCH-------HHHHHHHHHH-HHCCCCEEEEECHH--HHHHHH
T ss_conf 999999998299877499998999999-------9999999999-97699478861658--999998
No 15
>>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A (A:1-120,A:276-302)
Probab=94.30 E-value=0.2 Score=28.81 Aligned_cols=105 Identities=10% Similarity=0.113 Sum_probs=66.6
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEE-----EEEECCCCCCCCCH-----
Q ss_conf 98399998688768999630765110121011047741568989999865167758-----99721357888884-----
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAF-----IIGLPLNMNGSEGP----- 85 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~i-----VvGlP~~~~g~~~~----- 85 (160)
.+.++|+|+|..++-+++.|..+.+-.. ..++..........+.+++++...... .++.|=..+...+.
T Consensus 2 ~~~~iGIdIg~t~i~~~l~Dl~G~ii~~-~~~p~~~~~~~~~~I~~~i~~~~~~~~~i~gigi~~pG~vd~~~g~i~~~~ 80 (147)
T 3epq_A 2 NAXLGGIEAGGTXFVCAVGREDGTIIDR-IEFPTXXPDETIEXVIQYFSQFSLQAIGIGSFGPVDNDXTSQTYGTITATP 80 (147)
T ss_dssp -CCEEEEEECSSEEEEEEECTTSCEEEE-EEEECCCHHHHHHHHHHHHTTSCCSEEEEEECSSEECCTTSTTTTEECCCS
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEE-EEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCEEECCC
T ss_conf 9669999977777999999699959999-996589979999999999987147655881014013566641111692589
Q ss_pred HH-HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 47-99999999998404899779983671679999999
Q gi|254780976|r 86 RV-HSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQIL 122 (160)
Q Consensus 86 ~~-~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l 122 (160)
.. -.-.++.+.| ++.+++||.+.+.--...-|+..+
T Consensus 81 ~~~w~~~~L~~~L-~~~~~~PV~ieNDanaaalaE~~~ 117 (147)
T 3epq_A 81 XAGWRHYPFLQTV-XNEXXIPVGFSTDVNAAALGEFLF 117 (147)
T ss_dssp STTTBTCCHHHHH-HHHHCSCEEEEEHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHH-HHCCCCCEEEECCHHHHHHHHHHH
T ss_conf 8663788549989-753564579964578889999971
No 16
>>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} (A:1-119,A:275-289)
Probab=94.02 E-value=0.13 Score=29.96 Aligned_cols=105 Identities=10% Similarity=0.115 Sum_probs=69.2
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEE-E-CCCCCHHHHHHHHHHHH--HCCCEEEEEECCCCCCCC-----CHHH
Q ss_conf 8399998688768999630765110121011-0-47741568989999865--167758997213578888-----8447
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFL-V-RKKVTQTALELLSFITT--ENIAAFIIGLPLNMNGSE-----GPRV 87 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i-~-~~~~~~~~~~l~~ii~e--~~i~~iVvGlP~~~~g~~-----~~~~ 87 (160)
..++|+|+|..++-+++.|-.+.+-.-..+- . ....+.....+.+++++ .++.++-||.|-.-+... .+..
T Consensus 1 myvigidig~~~i~~~l~dl~g~ii~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~gIgia~pG~v~~~~g~v~~~~~~ 80 (134)
T 2aa4_A 1 MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNL 80 (134)
T ss_dssp CCEEEEEECSSEEEEEEECTTCCEEEEEEEECCSSCCHHHHHHHHHHHHTTTGGGCSEEEEEESSEEETTEEECSSGGGG
T ss_pred CCEEEEEECHHHEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEECCCC
T ss_conf 97999998810489999979997999999978988899999999999999987643741465445554101100101355
Q ss_pred H--HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 9--9999999998404899779983671679999999
Q gi|254780976|r 88 H--STRAFVHNMIDRKVYVPFVFWDERLTTVSAQQIL 122 (160)
Q Consensus 88 ~--~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l 122 (160)
. .-.++.+.+ ++.+++||++.++--+...|+..+
T Consensus 81 ~~w~~v~l~~~l-~~~~~~Pv~i~NDan~aalaE~~~ 116 (134)
T 2aa4_A 81 GGLLHFPLVKTL-EQLTNLPTIAINDAQAAAWAEFQA 116 (134)
T ss_dssp GGGTTCCHHHHH-HHHHCSCEEEEEHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHH-HHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 533455245555-565414511230155655413300
No 17
>>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis V583} (A:1-131,A:308-326)
Probab=93.69 E-value=0.15 Score=29.61 Aligned_cols=109 Identities=13% Similarity=0.167 Sum_probs=66.2
Q ss_pred CCCCCEEEEECCCCEEEEEEEECCCCEECCCE--EEECCCCCHHHHHHHHHHHH----HC-----CCEEEEEECCCC--C
Q ss_conf 89983999986887689996307651101210--11047741568989999865----16-----775899721357--8
Q gi|254780976|r 14 KPNQPIASIDLGTKRIGLAISDPGRRFAHPRP--FLVRKKVTQTALELLSFITT----EN-----IAAFIIGLPLNM--N 80 (160)
Q Consensus 14 ~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~--~i~~~~~~~~~~~l~~ii~e----~~-----i~~iVvGlP~~~--~ 80 (160)
+..+.++|||+|+..+-+++.|..+.+-.-.. +-...+....+..+.+.+++ .+ +.++.++.|=.. +
T Consensus 3 ~~~~~~iGIdig~t~i~~~l~Dl~g~ii~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gIgia~pg~vd~~ 82 (150)
T 2qm1_A 3 AXDKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSIIESIRHRIDLYNXKKEDFVGIGXGTPGSVDIE 82 (150)
T ss_dssp GGGCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCTTTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEETT
T ss_pred CCCCEEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC
T ss_conf 77986999998723389999939998999999847988898999999999999999972455445201001223211223
Q ss_pred CCC---CHHH--HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 888---8447--999999999984048997799836716799999999
Q gi|254780976|r 81 GSE---GPRV--HSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILI 123 (160)
Q Consensus 81 g~~---~~~~--~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~ 123 (160)
+.. .+.. -....+...| +..+++||.+.+.--....|+....
T Consensus 83 ~~~i~~~~~~~~w~~~~l~~~l-~~~~~~Pv~i~ND~na~alaE~~~G 129 (150)
T 2qm1_A 83 KGTVVGAYNLNWTTVQPVKEQI-ESALGIPFALDNDANVAALGERWKG 129 (150)
T ss_dssp TTEEECBGGGTBCSCBCHHHHH-HHHHCSCEEEEEHHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCCCCCCHHHHHH-HHHHCCCEEEECCCCHHHHHHHHHH
T ss_conf 3333454322223345178899-7721530686325433344454430
No 18
>>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} (A:1-142,A:312-344)
Probab=93.52 E-value=0.35 Score=27.39 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=25.8
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEE
Q ss_conf 98399998688768999630765110121011
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFL 47 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i 47 (160)
++.++|||+|+.++-+|+.+.......|--+.
T Consensus 2 ms~~iGIDlGTTns~Va~~~~~~v~~~PSvVa 33 (175)
T 1jce_A 2 LRKDIGIDLGTANTLVFLRGKGIVVNEPSVIA 33 (175)
T ss_dssp --CEEEEEECSSEEEEEETTTEEEEEEESCEE
T ss_pred CCCCEEEECCHHHEEEEEECCCEECCCCCEEE
T ss_conf 87868998774558999969788878981899
No 19
>>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi} (A:1-154,A:358-373)
Probab=93.36 E-value=0.079 Score=31.32 Aligned_cols=110 Identities=13% Similarity=0.010 Sum_probs=65.1
Q ss_pred CCCCCEEEEECCCCEEEEEEEECCCCE-E---CCCEEEECCCCCHHHHHHHHHHHH------HCCCEEEEEECCCCCCCC
Q ss_conf 899839999868876899963076511-0---121011047741568989999865------167758997213578888
Q gi|254780976|r 14 KPNQPIASIDLGTKRIGLAISDPGRRF-A---HPRPFLVRKKVTQTALELLSFITT------ENIAAFIIGLPLNMNGSE 83 (160)
Q Consensus 14 ~~~~riLgiD~G~kriGiAisd~~~~~-a---~Pl~~i~~~~~~~~~~~l~~ii~e------~~i~~iVvGlP~~~~g~~ 83 (160)
+....++|+|+|...+=+|+.|..+.+ + .|.++-...........+.++++. ..+..+.++.|-..+...
T Consensus 26 ~~~~~~igiDIG~t~i~~~l~d~~g~il~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~i~~igi~~pG~vd~~~ 105 (170)
T 2q2r_A 26 WNAPLTFVGDVGGTSARMGFVREGKNDSVHACVTRYSMKRKDITEIIEFFNEIIELMPASVMKRVKAGVINVPGPVTGGA 105 (170)
T ss_dssp GCSCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEECTTCBGGGHHHHHHHHHHHSCHHHHTTEEEEEEEESSCEETTT
T ss_pred CCCCEEEEEEECCHHHHHEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEECCE
T ss_conf 78982899998805310178988998277889852267889988999999999999987348887879999413177997
Q ss_pred C----HHHHH-HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 8----44799-99999999840489977998367167999999998
Q gi|254780976|r 84 G----PRVHS-TRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILID 124 (160)
Q Consensus 84 ~----~~~~~-v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~ 124 (160)
. +.... -..+...+ +..+++||++.+.--...-|+..+..
T Consensus 106 ~~~~~~~~~w~~~~l~~~l-~~~~~~pV~i~NDa~aaalaE~~~G~ 150 (170)
T 2q2r_A 106 VGGPFNNLKGIARLSDYPK-ALFPPGHSAILNDLEAGGFGVLAVSD 150 (170)
T ss_dssp EECCCSSSBSCEEGGGSCT-TTSCTTSEEEEEHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCHHHHHH-HHCCCCCEEECCHHHHHHHCCCEECC
T ss_conf 9998436534465577899-86488742321368898738865615
No 20
>>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} (A:1-187,A:362-389)
Probab=92.50 E-value=0.12 Score=30.25 Aligned_cols=24 Identities=29% Similarity=0.494 Sum_probs=20.2
Q ss_pred CCCCEEEEECCCCEEEEEEEECCC
Q ss_conf 998399998688768999630765
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGR 38 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~ 38 (160)
..+.++|||||+.++++|+.++..
T Consensus 2 s~~~viGIDfGTT~s~VA~~~~g~ 25 (215)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVFQHGK 25 (215)
T ss_dssp CSCCCEEEEECSSEEEEEEECSSS
T ss_pred CCCCEEEEECCCCCEEEEEEECCE
T ss_conf 989999998580108999998998
No 21
>>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding protein, helix-turn-helix, phosphotransferase system, metalloprotein; 2.70A {Escherichia coli} (A:83-194)
Probab=92.40 E-value=0.55 Score=26.22 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=54.4
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCE-EEECCCCCHHHHHHHHHHHH---------HCCCEEEEEECCCCCCCC--
Q ss_conf 983999986887689996307651101210-11047741568989999865---------167758997213578888--
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRP-FLVRKKVTQTALELLSFITT---------ENIAAFIIGLPLNMNGSE-- 83 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~-~i~~~~~~~~~~~l~~ii~e---------~~i~~iVvGlP~~~~g~~-- 83 (160)
.+.++|+|+|.-++=+|+.|..+.+-.-.. ..+..+....+..+.+.+++ ..+.++-+|.|--.|...
T Consensus 2 ~~~~igidig~t~i~~~l~d~~g~ii~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~~g~vd~~~~~ 81 (112)
T 1z6r_A 2 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGI 81 (112)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECCSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTE
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCE
T ss_conf 77899999889889999987999889999984256880799999999999999972554456007984023356778776
Q ss_pred ---CHH--HHHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf ---844--799999999998404899779983
Q gi|254780976|r 84 ---GPR--VHSTRAFVHNMIDRKVYVPFVFWD 110 (160)
Q Consensus 84 ---~~~--~~~v~~f~~~L~~~~~~l~v~~~D 110 (160)
.+. ...-..+.+.|. +.+++||++.+
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~-~~~g~Pv~i~N 112 (112)
T 1z6r_A 82 VHRXPFYEDVKEXPLGEALE-QHTGVPVYIQH 112 (112)
T ss_dssp EEECTTCTTCSSBCHHHHHH-HHHSSCEEEEE
T ss_pred EECCCCCCCCCCCCHHHHHH-HHHHCCCCCCC
T ss_conf 95458865445773688987-65401222355
No 22
>>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} (D:1-73,D:115-182,D:364-383)
Probab=91.85 E-value=0.12 Score=30.27 Aligned_cols=64 Identities=17% Similarity=0.160 Sum_probs=41.8
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCE-------E--EECCC-----------------------CC------HHHH
Q ss_conf 983999986887689996307651101210-------1--10477-----------------------41------5689
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRP-------F--LVRKK-----------------------VT------QTAL 57 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~-------~--i~~~~-----------------------~~------~~~~ 57 (160)
|+.+||||+|+.++-+|+.++......|.. + ....+ +. -.+.
T Consensus 1 M~~~lGIDfGTtnt~va~~~~g~~~~v~~~~~~~~~Ps~v~~~~~~~~~vG~~A~~~~~~~p~~~~~~~Kr~li~a~~l~ 80 (161)
T 1dkg_D 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIISAEVLK 80 (161)
T ss_dssp --CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTHHHHHHH
T ss_pred CCCEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCCCCEEEEEHHHCHHHHHHH
T ss_conf 99999999461188999999998899988999802568999968997996589997444198656873476639999999
Q ss_pred HHHHHHHHH---CCCEEEEEECCCC
Q ss_conf 899998651---6775899721357
Q gi|254780976|r 58 ELLSFITTE---NIAAFIIGLPLNM 79 (160)
Q Consensus 58 ~l~~ii~e~---~i~~iVvGlP~~~ 79 (160)
++.+.++++ .+..+|+..|-..
T Consensus 81 ~l~~~ae~~~~~~i~~~visvP~~f 105 (161)
T 1dkg_D 81 KMKKTAEDYLGEPVTEAVITVPAYF 105 (161)
T ss_dssp HHHHHHHHHHSSCCCEEEECBCTTC
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 9999999984899981999999999
No 23
>>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} (A:1-156,A:333-359)
Probab=90.93 E-value=0.29 Score=27.94 Aligned_cols=27 Identities=30% Similarity=0.314 Sum_probs=23.0
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEEC
Q ss_conf 983999986887689996307651101
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAH 42 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~ 42 (160)
|+.++|||||+.++.+|+.+.......
T Consensus 1 Ms~~iGIDfGTTnS~va~~~~g~~~~i 27 (183)
T 2v7y_A 1 MSKIIGIDLGTTNSCVAVLEGGEVKVI 27 (183)
T ss_dssp CCCEEEEEECSSEEEEEEEETTEEEEC
T ss_pred CCCEEEEECCHHCEEEEEEECCEEEEE
T ss_conf 997799984712289999999987999
No 24
>>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} (A:1-95,A:239-270)
Probab=90.66 E-value=1.3 Score=24.02 Aligned_cols=75 Identities=12% Similarity=0.028 Sum_probs=46.8
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHH-----HCCCEEEEEEC------CCCCCCCCH
Q ss_conf 8399998688768999630765110121011047741568989999865-----16775899721------357888884
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITT-----ENIAAFIIGLP------LNMNGSEGP 85 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e-----~~i~~iVvGlP------~~~~g~~~~ 85 (160)
+-+||||.|+..+=+++-|+.+.+-.-...=...........+.+++++ .+|.+|.++-| ++.+|.+..
T Consensus 3 ~y~LGIDiGtTsvKavl~D~dG~iia~~~~~t~~~~~~i~~~i~~~L~~~~~~~~~I~gIgvtg~g~~~v~~d~~g~~~~ 82 (127)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDGKEIVAKSLVAVGTGTSGPARSISEVLENAHMKKEDMAFTLATGYGRNSLEGIADKQMSE 82 (127)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCSSCCHHHHHHHHHHHHHTCCGGGCSEEEEESTTTTTTTTTCSEEECH
T ss_pred EEEEEECCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHE
T ss_conf 38985314774113799835302322566226998633899999999862588635557851353655666664432220
Q ss_pred HHHHHH
Q ss_conf 479999
Q gi|254780976|r 86 RVHSTR 91 (160)
Q Consensus 86 ~~~~v~ 91 (160)
.....+
T Consensus 83 ~w~d~R 88 (127)
T 1hux_A 83 LSCHAM 88 (127)
T ss_dssp HHHHHH
T ss_pred EECCCC
T ss_conf 221104
No 25
>>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12} (A:1-131,A:286-310)
Probab=89.85 E-value=1.5 Score=23.60 Aligned_cols=130 Identities=13% Similarity=0.107 Sum_probs=74.5
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCEECCCEEE-ECCCCC----HHHHHHHHHHHHHC--CCEEEEEECCCCCCC---CC
Q ss_conf 998399998688768999630765110121011-047741----56898999986516--775899721357888---88
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRFAHPRPFL-VRKKVT----QTALELLSFITTEN--IAAFIIGLPLNMNGS---EG 84 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i-~~~~~~----~~~~~l~~ii~e~~--i~~iVvGlP~~~~g~---~~ 84 (160)
..+-++|+|.|..+|=+++.|..+.+-.....= +..+.. .....+.+++++.. +.++.++.|=..+.. ..
T Consensus 5 ~~~~~iGVdig~t~i~~~l~dl~G~il~~~~~~~~~~~~~~~l~~i~~~i~~~~~~~~~~i~gIgia~pG~vd~~~g~v~ 84 (156)
T 3htv_A 5 QHNVVAGVDXGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEXIDEQLRRFNARCHGLVXGFPALVSKDKRTII 84 (156)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSCEEEEEEEEHHHHHTTCHHHHHHHHHHHHHHHHTEEEEEEEEEESSCBCTTSSCBC
T ss_pred CCCEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCEEE
T ss_conf 78899999977656999999299989999997088878899999999999999986599831799971641754897198
Q ss_pred -----HHH-HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----447-9999999999840489977998367167999999998698644546437899899999999968
Q gi|254780976|r 85 -----PRV-HSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAAALILQEVLDR 151 (160)
Q Consensus 85 -----~~~-~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k~~iD~~AA~iILq~~Ld~ 151 (160)
+.. -.-.++...| ++.+++||.+.++-=....|+...... + .-. --+-||.+--|+||-+
T Consensus 85 ~~~~~~~~~w~~~~l~~~L-~~~~~~pV~veNDanaaalaE~~~G~~---~-~~~--~~~~~~~~~~~~~~~~ 150 (156)
T 3htv_A 85 STPNLPLTAADLYDLADKL-ENTLNCPVEFSRDVNLQLSWDVVENRL---T-DFN--GAQGAAILAHQRFLPQ 150 (156)
T ss_dssp SCCSSSCCHHHHTTHHHHH-HHHHTSCEEEEEHHHHHHHHHHHHTTC---T-TTH--HHHHHHHHHHHHHCC-
T ss_pred ECCCCCCCCCCCCCHHHHH-HHHHCCCEEEECCHHHHHHHHHHHCCC---C-CHH--HHHHHHHHHHHHHHHH
T ss_conf 4688875322376679999-998798878405255555677763356---5-858--8999999999986454
No 26
>>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, structural genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum atcc 12472} (A:1-121,A:280-305)
Probab=89.41 E-value=1.6 Score=23.40 Aligned_cols=120 Identities=14% Similarity=0.105 Sum_probs=65.0
Q ss_pred HCCCCCCEEEEECCCCEEEEEEEECCCCEECCCEEEE---CCCCCHHHHHHHHHH----HHHC-----CCEEEEEECCCC
Q ss_conf 3589983999986887689996307651101210110---477415689899998----6516-----775899721357
Q gi|254780976|r 12 SLKPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLV---RKKVTQTALELLSFI----TTEN-----IAAFIIGLPLNM 79 (160)
Q Consensus 12 ~~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~---~~~~~~~~~~l~~ii----~e~~-----i~~iVvGlP~~~ 79 (160)
.++.++.+||||.|..+|=+++.|..+.+-.....-. ..+....+..+.+.+ ++.. +..+.+|.+.
T Consensus 6 ~~~~~~y~LGIDiGgT~ik~~l~D~~G~ii~~~~~~~~~~~~~~e~~~~~i~~~i~~ll~~~~i~~~~i~~~gvgi~~-- 83 (147)
T 1zc6_A 6 XNPSIRYLIGVDGGGTGTRIRLHASDGTPLAXAEGGASALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGL-- 83 (147)
T ss_dssp --CCCCEEEEEEECSSCEEEEEEETTCCEEEEEEESCCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEEE--
T ss_pred CCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC--
T ss_conf 898887899999282218999998999899999956998566999999999999999999849996555422320256--
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8888844799999999998404899779983671679999999986986445464378998999999999
Q gi|254780976|r 80 NGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIAAALILQEVL 149 (160)
Q Consensus 80 ~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k~~iD~~AA~iILq~~L 149 (160)
.|......... +. ....+-.|+..|+..-+...|+-. .+| --..-|.++||+--
T Consensus 84 ~g~~~~~~~~~--~~---~~~~~~~pv~i~NDa~~a~~aE~~--G~~---------~~~~~~~~~~~~~~ 137 (147)
T 1zc6_A 84 SGVHNRQWAGE--FE---SQAPGFARLSLATDGYTTLLGAHG--GQG---------DSAQGALLLLQRPS 137 (147)
T ss_dssp SCCCTTSHHHH--HH---HTCCCCSEEEEECHHHHHHHHHTT--TSS---------CHHHHHHHHTC---
T ss_pred CCCCCCCHHHH--HH---HHHCCCCCEEEHHHHHHHHHCCCC--CCC---------CHHHHHHHHHHCHH
T ss_conf 87654204677--77---775157743440348887533227--888---------99999999984655
No 27
>>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide- binding, phosphoprotein, polymorphism; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3fzh_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 1ngh_A* 1ngd_A* 1ngf_A* 1bup_A* 1nga_A* ... (A:1-208,A:383-404)
Probab=89.37 E-value=0.34 Score=27.48 Aligned_cols=27 Identities=26% Similarity=0.315 Sum_probs=22.0
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEEC
Q ss_conf 983999986887689996307651101
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAH 42 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~ 42 (160)
.+.++|||||+.++++|+.+.......
T Consensus 22 ~~~viGIDfGTTns~VA~~~~g~~~~~ 48 (230)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEII 48 (230)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEEC
T ss_pred CCCEEEEECCCCCEEEEEEECCEEEEE
T ss_conf 998999993714789999989988999
No 28
>>2gel_A Putative GRAM negative resuscitation promoting factor; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium LT2} PDB: 2gem_A 1okj_A (A:1-93,A:190-231)
Probab=85.81 E-value=2.6 Score=22.08 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=67.2
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHH-----HCCCEEEEEECCCCCCCCCHHHHHHH
Q ss_conf 8399998688768999630765110121011047741568989999865-----16775899721357888884479999
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITT-----ENIAAFIIGLPLNMNGSEGPRVHSTR 91 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e-----~~i~~iVvGlP~~~~g~~~~~~~~v~ 91 (160)
+++|+||--...+++|+.|....++.+...- ++..+.....+.+++++ .+++.|+++.= =|+. .-.+...
T Consensus 1 M~iLaIDTS~~~~~vAl~~d~~il~~~~~~~-~~hse~L~~~I~~lL~~a~i~~~dId~Iavs~G---PGSF-TGlRVgl 75 (135)
T 2gel_A 1 MRILAIDTATEACSVALWNNGTINAHFELCP-REHTQRILPMVQEILAASGASLNEIDALAFGRG---PGSF-TGVRIGI 75 (135)
T ss_dssp CEEEEEECSSSEEEEEEEETTEEEEEEEECC-SCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECC---SSCH-HHHHHHH
T ss_pred CCEEEEECCCCCEEEEEEECCEEEEEEEECC-HHHHHHHHHHHHHHHHHHCCCCHHHHHHEEECC---CCCC-HHHHHHH
T ss_conf 9899999277271999999999999999654-899999999999998550022123044300035---6642-3377889
Q ss_pred HHHHHHHHHCCCCCEEEEC--CCCCHHHHHHHH
Q ss_conf 9999998404899779983--671679999999
Q gi|254780976|r 92 AFVHNMIDRKVYVPFVFWD--ERLTTVSAQQIL 122 (160)
Q Consensus 92 ~f~~~L~~~~~~l~v~~~D--Er~TS~~A~~~l 122 (160)
.|++-| ....++|+.-+. |..-+..-++.+
T Consensus 76 a~AkgL-a~~~~iPligvs~~~~~~~~~~~~~~ 107 (135)
T 2gel_A 76 GIAQGL-ALGANLPMIGVSAAEDMLPIASQKLA 107 (135)
T ss_dssp HHHHHH-HHTTTCCEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999-98638987640599999999999998
No 29
>>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} (B:244-395)
Probab=85.42 E-value=2.8 Score=21.97 Aligned_cols=92 Identities=14% Similarity=0.053 Sum_probs=63.5
Q ss_pred EECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC
Q ss_conf 30765110121011047741568989999865167758997213578888844799999999998404899779983671
Q gi|254780976|r 34 SDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERL 113 (160)
Q Consensus 34 sd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~ 113 (160)
.+.....+.|+..-....-......+..+.++.+++.++|..+.... ............+.+...+.++..|--..
T Consensus 41 ~~~G~~~~NPiDl~g~~~~~~~~~~l~~l~~d~~vd~iiv~~~~~~~----~~~~~~~~~i~~~~~~~~kp~v~~~~~g~ 116 (152)
T 2fp4_B 41 FLNGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIV----NCAIIANGITKACRELELKVPLVVRLEGT 116 (152)
T ss_dssp HHTTCCBCEEEECCSSCCHHHHHHHHHHHHHCTTCCEEEEEEEESSS----CHHHHHHHHHHHHHHHTCCSCEEEEEEET
T ss_pred HHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCC----CHHHHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 97268711688733777678899999999719998789999808741----36999999999999529997589999989
Q ss_pred CHHHHHHHHHHCCCCH
Q ss_conf 6799999999869864
Q gi|254780976|r 114 TTVSAQQILIDMNVSR 129 (160)
Q Consensus 114 TS~~A~~~l~~~g~~~ 129 (160)
.+.++.+.|++.|+..
T Consensus 117 ~~~~~~~~l~~~gipv 132 (152)
T 2fp4_B 117 NVHEAQNILTNSGLPI 132 (152)
T ss_dssp THHHHHHHHHHTCSCC
T ss_pred CHHHHHHHHHHCCCCE
T ss_conf 8899999999779974
No 30
>>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, complete proteome, DNA binding, DNA repair; HET: DNA ADP; 2.10A {Escherichia coli} (A:124-289)
Probab=84.51 E-value=2.7 Score=22.04 Aligned_cols=115 Identities=13% Similarity=-0.092 Sum_probs=68.9
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 98399998688768999630765110121011047741568989999865167758997213578888844799999999
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVH 95 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~ 95 (160)
..-+++|..+..++|+|+.|..+.--. +. . -.+...+...+...+|..||+.-. .....
T Consensus 7 ~nyl~ai~~~~~~~gla~~D~stGe~~----~~--~-~~d~~~l~~~l~~~~P~EIi~~~~-----~~~~~--------- 65 (166)
T 1wb9_A 7 DNLLAAIWQDSKGFGYATLDISSGRFR----LS--E-PADRETMAAELQRTNPAELLYAED-----FAEMS--------- 65 (166)
T ss_dssp CCCEEEEEECSSCEEEEEECTTTCCEE----EE--C-CCSHHHHHHHHHHHCCSEEEEETT-----CCCGG---------
T ss_pred CCEEEEEEECCCEEEEEEEECCCCEEE----EE--E-ECCHHHHHHHHHHHCCCCEEECCC-----HHHHH---------
T ss_conf 748999998897499999997777699----99--8-389999999998648762765320-----24444---------
Q ss_pred HHHHHCCCCCEEEECCCCCH-HHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99840489977998367167-9999999986986----44546437899899999999968645
Q gi|254780976|r 96 NMIDRKVYVPFVFWDERLTT-VSAQQILIDMNVS----RKKRIQKVDSIAAALILQEVLDRISF 154 (160)
Q Consensus 96 ~L~~~~~~l~v~~~DEr~TS-~~A~~~l~~~g~~----~k~~k~~iD~~AA~iILq~~Ld~~~~ 154 (160)
.......+..+...+.+ ..+.+.+.+.-.. .-.....--..+|+-.|=.||.+...
T Consensus 66 ---~~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~Ll~Yl~~~~~ 126 (166)
T 1wb9_A 66 ---LIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQR 126 (166)
T ss_dssp ---GTTTCSSEEEECGGGGCHHHHHHHHHHHHTCSCSGGGTCTTCHHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf ---4665325451562012357799999876310001223444544679999988777765300
No 31
>>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, rossmann fold; HET: COA; 2.15A {Escherichia coli} (B:238-388)
Probab=84.32 E-value=3.1 Score=21.66 Aligned_cols=91 Identities=11% Similarity=0.016 Sum_probs=64.2
Q ss_pred ECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
Q ss_conf 07651101210110477415689899998651677589972135788888447999999999984048997799836716
Q gi|254780976|r 35 DPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLT 114 (160)
Q Consensus 35 d~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~T 114 (160)
+.....+.|+..-....-......+..+.++.+++.+++..+-.. ......+......+.+...+.|+.-|--.-.
T Consensus 41 ~~G~~~~NPvDl~g~~~~~~~~~~l~~~~~d~~vd~i~v~~~~~~----~~~~~~~~~i~~~~~~~~~k~~v~~~~~g~~ 116 (151)
T 2nu8_B 41 LHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGI----VRCDLIADGIIGAVAEVGVNVPVVVRLEGNN 116 (151)
T ss_dssp HTTCCBCEEEECCSCCCHHHHHHHHHHHHTSTTCCEEEEEEESCS----SCHHHHHHHHHHHHHHHTCCSCEEEEEESTT
T ss_pred HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCC----CCHHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 839983136762588879999999999975998768999985660----1089999999999997199986899999898
Q ss_pred HHHHHHHHHHCCCCH
Q ss_conf 799999999869864
Q gi|254780976|r 115 TVSAQQILIDMNVSR 129 (160)
Q Consensus 115 S~~A~~~l~~~g~~~ 129 (160)
+.++.+.+.+.|+..
T Consensus 117 ~~~~~~~l~~~gipv 131 (151)
T 2nu8_B 117 AELGAKKLADSGLNI 131 (151)
T ss_dssp HHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHHCCCCE
T ss_conf 799999999689984
No 32
>>3djc_A Type III pantothenate kinase; structural genomics, putative transferase, PSI-2, protein structure initiative; 2.40A {Legionella pneumophila subsp} (A:1-123,A:243-266)
Probab=83.30 E-value=3.4 Score=21.41 Aligned_cols=62 Identities=19% Similarity=0.088 Sum_probs=41.7
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEEECC
Q ss_conf 9839999868876899963076511012101104774156898999986516-----7758997213
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTEN-----IAAFIIGLPL 77 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~-----i~~iVvGlP~ 77 (160)
|+-+|+||.|-.++=+|+-|+...+..-.-+-...........+.+++.++. +..++|+-+.
T Consensus 1 M~m~L~IDIGNT~iK~al~~~~~~~~~~~~~t~~~~~~e~~~~l~~l~~~~~~~~~~v~~v~i~sVv 67 (147)
T 3djc_A 1 MSLILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNCSPETIRKIAICSVV 67 (147)
T ss_dssp --CEEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTCCGGGCCEEEEEESC
T ss_pred CCEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
T ss_conf 9679999966761089999999999999846888887899999999999759987886789999806
No 33
>>1qgo_A CBIK protein, anaerobic cobalamine biosynthetic cobalt chelatase; vitamin B12, metal ION chelation, cobalt precorrin; 2.40A {Salmonella typhimurium LT2} (A:133-238)
Probab=78.91 E-value=4.7 Score=20.58 Aligned_cols=57 Identities=12% Similarity=0.063 Sum_probs=48.5
Q ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 67758997213578888844799999999998404899779983671679999999986986
Q gi|254780976|r 67 NIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVS 128 (160)
Q Consensus 67 ~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~ 128 (160)
+...++|| .|+..+.......++..|.++.+.+.+.+++..-|-.++-+.+...|.+
T Consensus 5 ~~~illv~-----HGs~~~~~~~~~~l~~~l~~~~~~v~va~le~~P~i~~~i~~l~~~G~~ 61 (106)
T 1qgo_A 5 TEKVVFMG-----HGASHHAFAAYACLDHMMTAQRFPARVGAVESYPEVDILIDSLRDEGVT 61 (106)
T ss_dssp TEEEEEEE-----CCCSHHHHHHHHHHHHHHHHHTCSEEEEETTSSSCHHHHHHHHHHHTCC
T ss_pred CCEEEEEE-----CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCC
T ss_conf 85799995-----7997342589999999999638985999985069889999998745798
No 34
>>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A (A:1-107,A:305-334)
Probab=76.92 E-value=5.6 Score=20.12 Aligned_cols=121 Identities=16% Similarity=0.135 Sum_probs=65.4
Q ss_pred CEEEEECCCCEEEEEEEECCCCEE---CCCEEEECCCCCHHHHHHHHHHHHH--CCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 399998688768999630765110---1210110477415689899998651--67758997213578888844799999
Q gi|254780976|r 18 PIASIDLGTKRIGLAISDPGRRFA---HPRPFLVRKKVTQTALELLSFITTE--NIAAFIIGLPLNMNGSEGPRVHSTRA 92 (160)
Q Consensus 18 riLgiD~G~kriGiAisd~~~~~a---~Pl~~i~~~~~~~~~~~l~~ii~e~--~i~~iVvGlP~~~~g~~~~~~~~v~~ 92 (160)
.|+|+|+|-.++=+|..++.+... .|++.. ++ ..+|.+.+.+. .++...|=+-=.+..-.....+=|..
T Consensus 1 ~IiGwDIGGAnlKaA~i~~dg~~~v~q~ycPLW--kg----~d~L~~~L~~~~~~~~~~AVTMTGELaDcF~tR~eGV~~ 74 (137)
T 3cet_A 1 XILGIDIGGANTKITELHENGEFKVHHLYFPXW--KN----NDKLAEVLKTYSNDVSHVALVTTAELADSYETKKEGVDN 74 (137)
T ss_dssp CEEEEEEC--CEEEEEECSTTCCEEEEC---------------------------CCEEEEEECCC------CTTHHHHH
T ss_pred CEEEEEECCCEEEEEEECCCCEEEEEEEECHHH--CC----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 978998176046888954897699999977354--38----378999999855422356788789999888777654999
Q ss_pred HHHHHHHHCCCCCEEEEC--CCCCH-HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999998404899779983--67167-9999999986986445464378998999999999
Q gi|254780976|r 93 FVHNMIDRKVYVPFVFWD--ERLTT-VSAQQILIDMNVSRKKRIQKVDSIAAALILQEVL 149 (160)
Q Consensus 93 f~~~L~~~~~~l~v~~~D--Er~TS-~~A~~~l~~~g~~~k~~k~~iD~~AA~iILq~~L 149 (160)
.+..+. ..++-||.+++ -++-| .+|...- ...+.-.-..-+.|-+-+|.+-|
T Consensus 75 I~~av~-~~f~~~v~~y~~~ggf~~~~~Aa~nw----~~~~~~~~~~~~~~~~~~~~~~~ 129 (137)
T 3cet_A 75 ILNAAE-SAFGSNISVFDSNGNFISLESAKTNN----XYGKDVSLATPSFAVAELLKNEL 129 (137)
T ss_dssp HHHHHH-HHHTTCEEEECSSSCEEETTHHHHCG----GHCHHHHHSHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHCCCCEEEEECCCCEECHHHHHHHH----HCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999998-63599769996478612199987627----82743122017999999999898
No 35
>>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, joint center for structural genomics, JCSG; 2.50A {Thermotoga maritima MSB8} (A:1-104,A:174-218)
Probab=76.18 E-value=5.9 Score=20.00 Aligned_cols=97 Identities=10% Similarity=0.129 Sum_probs=66.1
Q ss_pred HHHHCCCCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHH-----HCCCEEEEEECCCCCCCC
Q ss_conf 998358998399998688768999630765110121011047741568989999865-----167758997213578888
Q gi|254780976|r 9 LVKSLKPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITT-----ENIAAFIIGLPLNMNGSE 83 (160)
Q Consensus 9 ~~~~~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e-----~~i~~iVvGlP~~~~g~~ 83 (160)
-+..+..+.+||+||--+ .+++|+.|....+..+... .+.+.......+.+++++ .+++.|+++.= =|+.
T Consensus 5 km~~~~~~~~ILaIDTS~-~~sVAi~~~~~il~~~~~~-~r~hse~L~p~Ie~lL~~a~l~~~dId~Iavs~G---PGSF 79 (149)
T 2a6a_A 5 KIHHHHHHXNVLALDTSQ-RIRIGLRKGEDLFEISYTG-EKKHAEILPVVVKKLLDELDLKVKDLDVVGVGIG---PGGL 79 (149)
T ss_dssp --------CEEEEEECSS-SEEEEEEETTEEEEEEEES-CGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEECC---SSCH
T ss_pred CCCCCCCCCEEEEEECCC-CCEEEEEECCEEEEEEECC-CHHHHHHHHHHHHHHHHHCCCCHHHHHEEEEECC---CCCC
T ss_conf 255456536032076164-3779999899999997027-6799999999999999984999798000366158---8752
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 84479999999999840489977998367
Q gi|254780976|r 84 GPRVHSTRAFVHNMIDRKVYVPFVFWDER 112 (160)
Q Consensus 84 ~~~~~~v~~f~~~L~~~~~~l~v~~~DEr 112 (160)
+ -.+....+++.| ...+++|++-++-.
T Consensus 80 T-GLRIGls~AKgL-a~~~~iPligVs~~ 106 (149)
T 2a6a_A 80 T-GLRVGIATVVGL-VSPYDIPVAPLNIS 106 (149)
T ss_dssp H-HHHHHHHHHHHH-HGGGTCCEEEECCC
T ss_pred H-HHHHHHHHHHHH-HHHCCCCCCCCCCC
T ss_conf 1-067899999889-86368860146749
No 36
>>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleotide-binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O (X:1-84,X:222-244)
Probab=74.56 E-value=6.4 Score=19.74 Aligned_cols=28 Identities=21% Similarity=0.227 Sum_probs=22.8
Q ss_pred CCCCCCEEEEECCCCEEEEEEEECCCCE
Q ss_conf 5899839999868876899963076511
Q gi|254780976|r 13 LKPNQPIASIDLGTKRIGLAISDPGRRF 40 (160)
Q Consensus 13 ~~~~~riLgiD~G~kriGiAisd~~~~~ 40 (160)
|..+.-+||||+|+..+=.++-|..+.+
T Consensus 1 Mm~~~~iLgIDiGTTs~Ka~lvd~~G~i 28 (107)
T 3h3n_X 1 MAEKNYVMAIDQGTTSSRAIIFDRNGKK 28 (107)
T ss_dssp -CCCCEEEEEEECSSEEEEEEEETTSCE
T ss_pred CCCCCEEEEEECCCCCHHHHEECCCCCE
T ss_conf 9978489999821112023157189999
No 37
>>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, SGC, transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} (A:1-107,A:275-287)
Probab=71.47 E-value=7.6 Score=19.30 Aligned_cols=54 Identities=13% Similarity=0.208 Sum_probs=40.7
Q ss_pred CCCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 8998399998688768999630765110121011047741568989999865167758997
Q gi|254780976|r 14 KPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIG 74 (160)
Q Consensus 14 ~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvG 74 (160)
+.+...+|||.|..-+=+++-+.....- ..++ ...++++.+++++.++..+++-
T Consensus 17 ~~~m~~lGIDiGsT~tK~V~~e~~~l~f---~~f~----t~~i~~vl~~Lk~~~i~~i~aT 70 (120)
T 2ews_A 17 RGSHMKVGIDAGGTLIKIVQEQDNQRTF---KTEL----TKNIDQVVEWLNQQQIEKLCLT 70 (120)
T ss_dssp ----CEEEEEECSSEEEEEEECSSCEEE---EEEE----GGGHHHHHHHHHTSCCSEEEEE
T ss_pred CCCCEEEEEEECHHHEEEEEEECCCCEE---EEEE----HHHHHHHHHHHHHHCCCEEEEE
T ss_conf 9997799999871139999993999899---9860----6669999999986258889997
No 38
>>1kcf_A Hypothetical 30.2 KD protein C25G10.02 in chromosome I; beta-alpha-beta motif, RUVC resolvase family, hydrolase; 2.30A {Schizosaccharomyces pombe} (A:)
Probab=69.63 E-value=8.4 Score=19.05 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=43.8
Q ss_pred HCCCCCCEEEEECCCCEEEEEEEECCCC---EECCCEEEECC-----------CCC------HHHHHHHHHHHHHCCCEE
Q ss_conf 3589983999986887689996307651---10121011047-----------741------568989999865167758
Q gi|254780976|r 12 SLKPNQPIASIDLGTKRIGLAISDPGRR---FAHPRPFLVRK-----------KVT------QTALELLSFITTENIAAF 71 (160)
Q Consensus 12 ~~~~~~riLgiD~G~kriGiAisd~~~~---~a~Pl~~i~~~-----------~~~------~~~~~l~~ii~e~~i~~i 71 (160)
...+..+|++||+|.|+...|.-..... .-.-...+.-. .+. ....-+..++..+.++-+
T Consensus 35 ~~~~~~sIlSID~GikNlA~~~l~~~~~~~~~i~~W~kl~l~~~~~~~~~~~~~~~p~~~s~~a~~lis~li~~~~pd~v 114 (258)
T 1kcf_A 35 PIYPTSRVLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVI 114 (258)
T ss_dssp CCCCCSSEEEEEECSTTEEEEEEEECTTSCEEEEEEEEECTTSCCTTCCCCCCCCSHHHHHHHHHHHHHHHHHHHCCSEE
T ss_pred CCCCCCCEEEEECCCHHHEEEEECCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 57899837899737102000245137898755676005222666675421245688599999999999987643269989
Q ss_pred EEEECCCCCCCCC
Q ss_conf 9972135788888
Q gi|254780976|r 72 IIGLPLNMNGSEG 84 (160)
Q Consensus 72 VvGlP~~~~g~~~ 84 (160)
+|=-.....|...
T Consensus 115 lIErQr~Rs~~sa 127 (258)
T 1kcf_A 115 LMERQRYRSGIAT 127 (258)
T ss_dssp EEEECCCCTTTCC
T ss_pred EECCCCCCCCCCC
T ss_conf 9764666567650
No 39
>>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} (A:177-261)
Probab=68.93 E-value=8.7 Score=18.96 Aligned_cols=65 Identities=11% Similarity=0.150 Sum_probs=45.8
Q ss_pred HHHHHHHHCCCEE-EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCH
Q ss_conf 9999865167758-9972135788888447999999999984048997799836716799999999869864
Q gi|254780976|r 59 LLSFITTENIAAF-IIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSR 129 (160)
Q Consensus 59 l~~ii~e~~i~~i-VvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~ 129 (160)
+.-+.++|++..+ ++|+ +....+..+.+..+.+.+.+ -++++.|+++..+++.|+....+.|.+.
T Consensus 11 f~Y~~~~ygl~~~~~~~~----~~~~~ps~~~i~~~~~~ik~--~~i~~If~e~~~~~k~~~~ia~e~g~~~ 76 (85)
T 3cx3_A 11 FSYLAKRFGLNQLGIAGI----SPEQEPSPRQLTEIQEFVKT--YKVKTIFTESNASSKVAETLVKSTGVGL 76 (85)
T ss_dssp CHHHHHHTTCCEEEEECS----STTCCCCSHHHHHHHHHHHH--TTCCCEEECSSSCCHHHHHHHSSSSCCE
T ss_pred CCHHHHHCCCEEEEECCC----CCCCCCCHHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHCCCCE
T ss_conf 202688659668750466----76445225689999987524--6755999848899199999999809986
No 40
>>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* (A:1-125,A:287-326)
Probab=68.85 E-value=8.7 Score=18.95 Aligned_cols=120 Identities=9% Similarity=0.073 Sum_probs=67.2
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCEECCC-EEE--------E----CCCCCHHHHHHHHHHHH---HCCCEEEEEECCC
Q ss_conf 998399998688768999630765110121-011--------0----47741568989999865---1677589972135
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRFAHPR-PFL--------V----RKKVTQTALELLSFITT---ENIAAFIIGLPLN 78 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~a~Pl-~~i--------~----~~~~~~~~~~l~~ii~e---~~i~~iVvGlP~~ 78 (160)
++..+||||--...+++|+.|....+.... ... + +.+.+.....+.+++++ .+++.|+|+.=
T Consensus 4 ~~M~iLaIdTS~~~~sval~~~~~~i~~~~~~~~~~~~~g~~~~~a~~~H~e~L~~~i~~~L~~~~i~~id~Iavs~G-- 81 (165)
T 3en9_A 4 DPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQG-- 81 (165)
T ss_dssp CSCEEEEEECSSSEEEEEEEETTSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHSCGGGCCEEEEEEE--
T ss_pred CCCEEEEEECCCHHHEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC--
T ss_conf 875699998651313679997999299886687657989999189999999999999999997589535888999679--
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH--HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 788888447999999999984048997799836716799999--9998698644546437899899999999968
Q gi|254780976|r 79 MNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQ--ILIDMNVSRKKRIQKVDSIAAALILQEVLDR 151 (160)
Q Consensus 79 ~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~--~l~~~g~~~k~~k~~iD~~AA~iILq~~Ld~ 151 (160)
=|+ -.-.+....|++.|. ...++|++-+ +|.+|.- .....++ --+.+|+|=+-+++..
T Consensus 82 -PGs-fTgLRVG~~~AkgLa-~al~iPlv~v----s~lea~a~~~~~~~~~--------~~dn~~mia~~g~~~~ 141 (165)
T 3en9_A 82 -PGL-GPSLRVTATVARTLS-LTLKKPIIGV----NHCIAHIEIGKLTTEA--------CGDNGAMIAWLGLLMH 141 (165)
T ss_dssp -SSC-HHHHHHHHHHHHHHH-HHHTCCEEEE----EHHHHHHHHHHHHSSC--------HSSCHHHHHHHHHHHH
T ss_pred -CCC-HHHHHHHHHHHHHHH-HHCCCCCCCC----CHHHHCCCCCHHHCCC--------HHHHHHHHHHHHHHHH
T ss_conf -861-887999999999999-8559983664----2466420010221156--------2278999999999999
No 41
>>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} (A:1-74,A:255-284,A:436-494)
Probab=67.92 E-value=9.1 Score=18.84 Aligned_cols=96 Identities=9% Similarity=0.006 Sum_probs=57.3
Q ss_pred CCEEEEECCCCEEEEEEEEC-C-CCEEC---CCEEEECCCCCHHHHHH----HHHHHHHCCCEEEEEECC----------
Q ss_conf 83999986887689996307-6-51101---21011047741568989----999865167758997213----------
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDP-G-RRFAH---PRPFLVRKKVTQTALEL----LSFITTENIAAFIIGLPL---------- 77 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~-~-~~~a~---Pl~~i~~~~~~~~~~~l----~~ii~e~~i~~iVvGlP~---------- 77 (160)
.-+||||.|+..+=.++-|. . ..++. |.+-....+....|..+ .+++..++|.+|-++-+-
T Consensus 5 ~~~lgID~Gtt~~k~~l~d~~~g~ii~~~~~p~~g~~e~d~~~~~~~~~~~~~~~~~~~~I~aIgis~~~gv~~~~~~~l 84 (163)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQAGGLDDVSALAVGGQQPAIAGKNVEG 84 (163)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCSSSEECTHHHHHHHHHHHHHTTCSTTEEEEEEEECSTTTTTTTSTT
T ss_pred CEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCC
T ss_conf 57999972550348899989999699999600889810899999999999999727710446999946879997538887
Q ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH
Q ss_conf -------------5788888447999999999984048997799836716799
Q gi|254780976|r 78 -------------NMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVS 117 (160)
Q Consensus 78 -------------~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~ 117 (160)
.+.|.-+ ++.... ++....++.||...+..-++.-
T Consensus 85 ~~~~~~g~~i~~i~~~GGgs-rs~~~~----qi~adv~g~~v~~~~~~E~~a~ 132 (163)
T 3i8b_A 85 GCLLAPGGGDNAXASLGLGX-KSEAIR----TLAPSILGXDVTRPATDEYVAI 132 (163)
T ss_dssp CCEECCCEEHHHHHHHHTTC-GCHHHH----HHHHHHHTSCEEEECCCCHHHH
T ss_pred CCCCCCCCCCHHHHHCCCCC-CCHHHH----HHHHHHHCCCEEECCCCCHHHH
T ss_conf 76424655655665403455-088999----9999987994696788858999
No 42
>>2o8b_A DNA mismatch repair protein MSH2; DNA damage response, somatic hypermutation, protein-DNA complex, DNA mispair, cancer, ABC transporter ATPase; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 2o8e_A* (A:136-288)
Probab=67.86 E-value=9.1 Score=18.83 Aligned_cols=124 Identities=8% Similarity=0.023 Sum_probs=72.5
Q ss_pred CCCEEEEE----CCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHH
Q ss_conf 98399998----68876899963076511012101104774156898999986516775899721357888884479999
Q gi|254780976|r 16 NQPIASID----LGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTR 91 (160)
Q Consensus 16 ~~riLgiD----~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~ 91 (160)
+.-+++|= =+..++|+|+.|..+.--. +..+. ......++...+...+|..||+.-+ ...+......
T Consensus 9 ~nyl~ai~~~~~~~~~~~Gla~~D~sTge~~-~~~~~---d~~~~~~l~~~L~~~~P~EIl~~~~-----~~~~~~~~~~ 79 (153)
T 2o8b_A 9 SIGVVGVKMSAVDGQRQVGVGYVDSIQRKLG-LCEFP---DNDQFSNLEALLIQIGPKECVLPGG-----ETAGDMGKLR 79 (153)
T ss_dssp -CCEEEEECCSSSSSCEEEEEEEETTTTEEE-EEEEE---CCSSCHHHHHHHHHHCCSEEEECCC-----CSSSHHHHHH
T ss_pred EEEHHHHCCCCCCCCCEEEEEEEECCCCEEE-EEEEC---CCCHHHHHHHHHHCCCCEEEEEECC-----CCCHHHHHHH
T ss_conf 3101220024457898799999998767899-99964---8747999999985359879999799-----7845699999
Q ss_pred HHHHHHHHHCCCCCEEEECCCCCH-HHHHHHHHHCCCCH---------HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999840489977998367167-99999999869864---------454643789989999999996864
Q gi|254780976|r 92 AFVHNMIDRKVYVPFVFWDERLTT-VSAQQILIDMNVSR---------KKRIQKVDSIAAALILQEVLDRIS 153 (160)
Q Consensus 92 ~f~~~L~~~~~~l~v~~~DEr~TS-~~A~~~l~~~g~~~---------k~~k~~iD~~AA~iILq~~Ld~~~ 153 (160)
. . .+.+++.+..+++...+ ..|.+.+.+.-... ......-..++|+--|=.||.+..
T Consensus 80 ---~-~-~~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~all~Yl~~tq 146 (153)
T 2o8b_A 80 ---Q-I-IQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLS 146 (153)
T ss_dssp ---H-H-HHTTTCEEEECSSTTCCCCSHHHHTCC---CCCSCTTTTTSCGGGGCHHHHHHHHHHHHHSCTTS
T ss_pred ---H-H-HHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf ---8-8-74078057864522246899999999762557600156100011320999999999999999834
No 43
>>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural genomics, transferase, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum atcc 11170} (A:1-242)
Probab=67.78 E-value=6.5 Score=19.71 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=24.0
Q ss_pred HCCCCCCEEEEECCCCEEEEEEEECCCCE
Q ss_conf 35899839999868876899963076511
Q gi|254780976|r 12 SLKPNQPIASIDLGTKRIGLAISDPGRRF 40 (160)
Q Consensus 12 ~~~~~~riLgiD~G~kriGiAisd~~~~~ 40 (160)
+|....-+||||+|+..+=+++-|..+..
T Consensus 2 ~m~~~~~~lgIDiGTts~Ka~l~d~~g~~ 30 (242)
T 3ifr_A 2 SLAQGRQVIGLDIGTTSTIAILVRLPDTV 30 (242)
T ss_dssp -----CEEEEEEECSSEEEEEEEETTTEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEEECCCCE
T ss_conf 87789889999772223376799688999
No 44
>>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} (A:106-216)
Probab=67.42 E-value=9.3 Score=18.77 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=52.3
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEEECC-CCCHHH----HHHHHHHHHHCC-----CEEEEEECCCCCCCCC--
Q ss_conf 8399998688768999630765110121011047-741568----989999865167-----7589972135788888--
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRK-KVTQTA----LELLSFITTENI-----AAFIIGLPLNMNGSEG-- 84 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~-~~~~~~----~~l~~ii~e~~i-----~~iVvGlP~~~~g~~~-- 84 (160)
+.++|+|.|..++=+++.|..+.+-.....-... .....+ ..+.+++++.+. -++-+|.|=-.+...+
T Consensus 3 ~~~igidig~~~i~~~l~d~~g~ii~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~gigi~~~g~v~~~~~~~ 82 (111)
T 1z05_A 3 WQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIV 82 (111)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEE
T ss_pred EEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEE
T ss_conf 69999998999899999969997999996134579878999999999999999707665624678653202544777623
Q ss_pred HH---H-HHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 44---7-99999999998404899779983
Q gi|254780976|r 85 PR---V-HSTRAFVHNMIDRKVYVPFVFWD 110 (160)
Q Consensus 85 ~~---~-~~v~~f~~~L~~~~~~l~v~~~D 110 (160)
.. . -.-.++.+.+ ++.+++||++-+
T Consensus 83 ~~~~~~~w~~~~l~~~l-~~~~~~pv~i~N 111 (111)
T 1z05_A 83 LQMPHYNVKNLALGPEI-YKATGLPVFVAN 111 (111)
T ss_dssp EECSSSBCSSBCHHHHH-HHHHCSCEEEEE
T ss_pred CCCCCCCCCCCCHHHHH-HHHHHHHEEECC
T ss_conf 25775201002038887-544322011026
No 45
>>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* (A:1-118,A:283-330)
Probab=67.16 E-value=9.4 Score=18.74 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=60.6
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEEECC------------CCCHHHHHHHHHHHH-----HCCCEEEEEECCCC
Q ss_conf 8399998688768999630765110121011047------------741568989999865-----16775899721357
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRK------------KVTQTALELLSFITT-----ENIAAFIIGLPLNM 79 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~------------~~~~~~~~l~~ii~e-----~~i~~iVvGlP~~~ 79 (160)
..|||||--...+++|+.+....++......... +.......+.+.+++ .+++.|+++.=
T Consensus 1 M~ILgIeTS~~~~svalv~dg~il~~~~~~~~~~~~g~~~~~~~~~Hs~~l~~~i~~~L~~agi~~~did~Iavt~G--- 77 (166)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVSEDKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQG--- 77 (166)
T ss_dssp CCEEEEECSSSEEEEEEECSSCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEE---
T ss_pred CEEEEEECCCCCEEEEEEECCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC---
T ss_conf 91999985661308999989999999888644477983817999999999999999999973998431422567505---
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH
Q ss_conf 88888447999999999984048997799836716799999
Q gi|254780976|r 80 NGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQ 120 (160)
Q Consensus 80 ~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~ 120 (160)
=| ...-......|++.| ...+++|+..+ ++.+|.-
T Consensus 78 PG-s~tgLRvg~~~Ak~L-a~~~~iPlv~V----~hl~aha 112 (166)
T 2ivn_A 78 PG-LGPALRVVATAARAL-AVKYRKPIVGV----NHCIAHV 112 (166)
T ss_dssp SS-CHHHHHHHHHHHHHH-HHHTTCCEEEE----EHHHHHH
T ss_pred CC-CCHHHHHHHHHHHHH-HHHCCCCCCCC----CHHHHHH
T ss_conf 76-431279999999998-86426552020----2699999
No 46
>>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} (A:1-122,A:247-267)
Probab=66.95 E-value=9.5 Score=18.72 Aligned_cols=101 Identities=10% Similarity=0.077 Sum_probs=54.3
Q ss_pred HHCCCCCCEEEEECCCCEEEEEEEECCCCEECCCE-EEE---CCCCC---HHHHHHHHHHHH-----HCCCEEEEEEC--
Q ss_conf 83589983999986887689996307651101210-110---47741---568989999865-----16775899721--
Q gi|254780976|r 11 KSLKPNQPIASIDLGTKRIGLAISDPGRRFAHPRP-FLV---RKKVT---QTALELLSFITT-----ENIAAFIIGLP-- 76 (160)
Q Consensus 11 ~~~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~-~i~---~~~~~---~~~~~l~~ii~e-----~~i~~iVvGlP-- 76 (160)
...+....++|+|.|+.++=+++.|..+.+-.-.. .++ ..... ..+..+...+.+ ..+.++-++.|
T Consensus 6 ~~n~~~~y~iGIdIg~t~i~~~l~D~~G~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~igI~~~G~ 85 (143)
T 1woq_A 6 EKSHKNAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTPQPATPESVAEAVALVVAELSARPEAPAAGSPVGVTFPGI 85 (143)
T ss_dssp -----CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHTSTTCCCTTCCEEEEESSC
T ss_pred HCCCCCCCEEEEEECCCEEEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
T ss_conf 14389998999997765599999989999899999996789999999999999999999865115676440156402322
Q ss_pred CCCCCCCCHHH----HHHHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 35788888447----9999999999840489977998367
Q gi|254780976|r 77 LNMNGSEGPRV----HSTRAFVHNMIDRKVYVPFVFWDER 112 (160)
Q Consensus 77 ~~~~g~~~~~~----~~v~~f~~~L~~~~~~l~v~~~DEr 112 (160)
.+.+...-..+ -.-..+.+.| ++.+++||+..+-.
T Consensus 86 v~~~~g~v~~~~~~~w~~~~l~~~L-~~~~g~PV~i~N~~ 124 (143)
T 1woq_A 86 IQHGVVHSAANVDKSWLNTDIDALL-TARLGRPVEVINRN 124 (143)
T ss_dssp EETTEECCCTTSCGGGTTCBHHHHH-HHHHTSCEEEEEST
T ss_pred CCCEEEEEEECCCCCCCCCHHHHHH-HHHHHHCHHCCCCC
T ss_conf 2220688863135554311168899-87631020116589
No 47
>>3gbt_A Gluconate kinase; LBA0354, FGGY kinase family, carbohydrate metabolic process, transferase, structural genomics, PSI-2; 2.40A {Lactobacillus acidophilus ncfm} (A:1-237)
Probab=64.87 E-value=8 Score=19.19 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=31.4
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCEE----CCCEEEECC------CCCHHHHHHHHHHHH
Q ss_conf 998399998688768999630765110----121011047------741568989999865
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRFA----HPRPFLVRK------KVTQTALELLSFITT 65 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~a----~Pl~~i~~~------~~~~~~~~l~~ii~e 65 (160)
+|.-+||||+|+.-+=+++-|..+..- .|++..... +....+..+.+.+.+
T Consensus 2 Sm~~~lgID~GTts~ka~l~d~~g~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~ 62 (237)
T 3gbt_A 2 SLKYIIGXDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFD 62 (237)
T ss_dssp CCEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHH
T ss_conf 9778999975110310006838898999999847831699997147999999999999999
No 48
>>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} (A:)
Probab=64.36 E-value=11 Score=18.41 Aligned_cols=57 Identities=14% Similarity=0.161 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
Q ss_conf 15689899998651677589972135788888447999999999984048997799836716
Q gi|254780976|r 53 TQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLT 114 (160)
Q Consensus 53 ~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~T 114 (160)
......|.+.+++++++.+|+|-.-. .+-... ..-..+..+.. ...+||..+..+.|
T Consensus 106 g~~~~~I~~~a~~~~~dliVlG~~~~-~~~~~~---~~Gs~~~~il~-~~~~pVlvV~~~~~ 162 (162)
T 1mjh_A 106 GIPHEEIVKIAEDEGVDIIIMGSHGK-TNLKEI---LLGSVTENVIK-KSNKPVLVVKRKNS 162 (162)
T ss_dssp ECHHHHHHHHHHHTTCSEEEEESCCS-SCCTTC---SSCHHHHHHHH-HCCSCEEEECCCCC
T ss_pred CCHHHHHHHHHHCCCCCEEEEECCCC-CCCCCC---CCCCHHHHHHH-CCCCCEEEECCCCC
T ss_conf 66899998886315678799806899-865446---10749999996-18998999838999
No 49
>>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, structural genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* (A:1-85,A:223-246)
Probab=62.53 E-value=11 Score=18.31 Aligned_cols=26 Identities=23% Similarity=0.218 Sum_probs=21.6
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCE
Q ss_conf 99839999868876899963076511
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRF 40 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~ 40 (160)
.+.-+||||+|+..+=.++-|..+.+
T Consensus 4 ~~~yilgIDiGTTsiKa~l~D~~G~~ 29 (109)
T 3g25_A 4 XEKYILSIDQGTTSSRAILFNQKGEI 29 (109)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTSCE
T ss_pred CCCEEEEEECCCCCCHHHEECCCCCE
T ss_conf 03078999840204011068499989
No 50
>>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str} (X:1-92,X:240-268)
Probab=62.42 E-value=12 Score=18.20 Aligned_cols=100 Identities=14% Similarity=0.141 Sum_probs=62.7
Q ss_pred EEEEECCCCEEEEEEEECCCCEEC-CCEEEECCCCCHHHHHHHHHHHHHC-----CCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 999986887689996307651101-2101104774156898999986516-----7758997213578888844799999
Q gi|254780976|r 19 IASIDLGTKRIGLAISDPGRRFAH-PRPFLVRKKVTQTALELLSFITTEN-----IAAFIIGLPLNMNGSEGPRVHSTRA 92 (160)
Q Consensus 19 iLgiD~G~kriGiAisd~~~~~a~-Pl~~i~~~~~~~~~~~l~~ii~e~~-----i~~iVvGlP~~~~g~~~~~~~~v~~ 92 (160)
+|+||.|-..|=+++-|.....++ -++|-.....+.....+..++..++ |+++++.= --|. ....
T Consensus 2 LLaIDIGNTniv~Glfdg~~l~~~~Ri~T~~~~T~DE~~~~l~~ll~~~~i~~~~I~~iiISS-------VVP~--lt~~ 72 (121)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGELRQHWRMETDRHKTEDEYGMLVKQLLEHEGLSFEDVKGIIVSS-------VVPP--IMFA 72 (121)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEEE-------SCHH--HHHH
T ss_pred EEEEEECCCCEEEEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC-------CHHH--HHHH
T ss_conf 899998755009999989999999998358767778999999999986488754322478631-------0487--9999
Q ss_pred HHHHHHHHCCCCCEEEE-CCCCCHHHHHHHHHHCCCC
Q ss_conf 99999840489977998-3671679999999986986
Q gi|254780976|r 93 FVHNMIDRKVYVPFVFW-DERLTTVSAQQILIDMNVS 128 (160)
Q Consensus 93 f~~~L~~~~~~l~v~~~-DEr~TS~~A~~~l~~~g~~ 128 (160)
+.+. .++.++.+..++ .+=+-|.....+|.+.+..
T Consensus 73 l~~a-~k~~f~~~PlvV~pgi~~~~~~~~~~~~~~~~ 108 (121)
T 2h3g_X 73 LERM-CEKYFKIKPLVVGPGIFLTLKGLYMLYERNAN 108 (121)
T ss_dssp HHHH-HHHHTCCCCEECSTTCTHHHHHHHHHHHHTC-
T ss_pred HHHH-HHHHCCCCEEEECCCCCHHHHHHHHHHHHCHH
T ss_conf 9999-99836875299636768699999999996700
No 51
>>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, structural genomics; 2.00A {Exiguobacterium sibiricum 255-15} (A:1-104)
Probab=62.12 E-value=6.6 Score=19.69 Aligned_cols=58 Identities=12% Similarity=0.085 Sum_probs=40.7
Q ss_pred HHCCCCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 83589983999986887689996307651101210110477415689899998651677589972
Q gi|254780976|r 11 KSLKPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGL 75 (160)
Q Consensus 11 ~~~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGl 75 (160)
..-....++.+.|.-.-..|.+.+|.... +++.....++..|.+++++++|+.++.|.
T Consensus 23 ~~~~~~~~vi~~d~~~~~~~~~~~d~~~~-------iP~~~~~~~~~~l~~i~~~~~iD~vip~~ 80 (104)
T 2pn1_A 23 VKEFKTGRVSTADCSPLASALYXADQHYI-------VPKIDEVEYIDHLLTLCQDEGVTALLTLI 80 (104)
T ss_dssp HHHCCSSEEEEEESCTTCGGGGGSSSEEE-------CCCTTSTTHHHHHHHHHHHHTCCEEEESS
T ss_pred HHCCCCCEEEEECCCCCCHHHHHCCEEEE-------CCCCCCHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 97699998999869999867884286797-------68987377999999999985999894046
No 52
>>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum} (A:1-126,A:288-334)
Probab=60.76 E-value=12 Score=18.02 Aligned_cols=91 Identities=12% Similarity=0.092 Sum_probs=57.4
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECC------------CCCHHHHHHHHHHH-----HHCCCEEEEEECC
Q ss_conf 998399998688768999630765110121011047------------74156898999986-----5167758997213
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRK------------KVTQTALELLSFIT-----TENIAAFIIGLPL 77 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~------------~~~~~~~~l~~ii~-----e~~i~~iVvGlP~ 77 (160)
+...|||||=-...+++|+.+....++......... .......-+.+.++ -.+++.|+++.-
T Consensus 4 ~~M~ILgIeTS~~~~svAl~~dg~il~~~~~e~~~~~~g~~~~~a~~~H~~~l~~~i~~~L~~agi~~~diD~Vavs~G- 82 (173)
T 3eno_A 4 DPMIVLGLEGTAHTISCGIIDESRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSMG- 82 (173)
T ss_dssp CCCEEEEEECSSSEEEEEEEESSCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECS-
T ss_pred CCCEEEEEECCCCCEEEEEEECCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC-
T ss_conf 6857999975643118999989989899999722787986758999999999999999999975986412005774033-
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 578888844799999999998404899779983
Q gi|254780976|r 78 NMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWD 110 (160)
Q Consensus 78 ~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~D 110 (160)
-|.. .-......+++.|. ..+++|++.++
T Consensus 83 --PG~~-t~Lrvg~~~ak~la-~~~~~Plv~V~ 111 (173)
T 3eno_A 83 --PGLA-PSLRVTATAARTIS-VLTGKPIIGVN 111 (173)
T ss_dssp --SSCH-HHHHHHHHHHHHHH-HHHTCCCEEEC
T ss_pred --CCCC-CCCHHHHHHHHHHH-HHCCCCCCCCC
T ss_conf --5655-45046778988887-52253420323
No 53
>>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, acetylation, ATP-binding, calmodulin-binding, chaperone, cytoplasm; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* (A:1-38,A:137-233,A:315-399)
Probab=59.82 E-value=10 Score=18.54 Aligned_cols=79 Identities=16% Similarity=0.159 Sum_probs=44.1
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 98399998688768999630765110121011047741568989999865167758997213578888844799999999
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVH 95 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~ 95 (160)
|++++|||+|+.+.=+|+...... .++++...+. ..--.+..+||.-|-+.+.. +-+.+++-+
T Consensus 1 ~~~~~g~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~--------~~p~~v~~~vitVP~~~t~~---qr~a~~~aa- 63 (220)
T 3d2f_A 1 MSTPFGLDLGNNNSVLAVARNRGI-----DIVVNEVSNR--------STPSNITDVCIAVPPWYTEE---QRYNIADAA- 63 (220)
T ss_dssp -CCCEEEECCSSEEEEEEEETTEE-----EEECCTTSCS--------SEECCCCEEEEEECTTCCHH---HHHHHHHHH-
T ss_pred CCCEEEEECCCCCEEEEEEECCEE-----EEEECCCCCC--------EECECCCEEEEEECCCCCHH---HHHHHHHHH-
T ss_conf 997599993722689999999975-----8998699990--------31679875999987989989---999999999-
Q ss_pred HHHHHCCCC-CEEEECCCCCH
Q ss_conf 998404899-77998367167
Q gi|254780976|r 96 NMIDRKVYV-PFVFWDERLTT 115 (160)
Q Consensus 96 ~L~~~~~~l-~v~~~DEr~TS 115 (160)
+.-++ ++.+++|-.-.
T Consensus 64 ----~~AG~~~~~li~ep~Aa 80 (220)
T 3d2f_A 64 ----RIAGLNPVRIVNDVTAA 80 (220)
T ss_dssp ----HHTTCEEEEEEEHHHHH
T ss_pred ----HHCCCCEEEEECCCHHH
T ss_conf ----97799804776463788
No 54
>>2vgn_A DOM34; translation termination factor, protein biosynthesis, translation regulation, cell division, mRNA degradation; 2.5A {Saccharomyces cerevisiae} (A:138-278)
Probab=58.59 E-value=14 Score=17.79 Aligned_cols=101 Identities=10% Similarity=0.035 Sum_probs=58.9
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEEECCC-----------CCHHHHHHHHHHH----HHCCCEEEEEECCCCCC
Q ss_conf 83999986887689996307651101210110477-----------4156898999986----51677589972135788
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKK-----------VTQTALELLSFIT----TENIAAFIIGLPLNMNG 81 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~-----------~~~~~~~l~~ii~----e~~i~~iVvGlP~~~~g 81 (160)
--++.+|-|...+|+--+......+.--..++++. ...++.++.+.+. -.++..|||+=|
T Consensus 5 ~~~v~id~g~A~i~ll~~~~~~~~~~i~~~ip~K~~~~g~s~~~~~~~~Ff~~V~~~~~~~~~~~~v~~IIiaGP----- 79 (141)
T 2vgn_A 5 TAAVVLQEGIAHVCLVTSSSTILKQKIEYSXPKKKRTTDVLKFDEKTEKFYKAIYSAXKKDLNFDKLKTIILCSP----- 79 (141)
T ss_dssp EEEEEEETTEEEEEEECSSCEEEEEEEEC---------CCSSCCHHHHHHHHHHHHHHHHHCCTTTCSEEEEEES-----
T ss_pred EEEEEEECCCEEEEEECCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC-----
T ss_conf 899999569689999827659999999982677677664004667999999999999998742213647999686-----
Q ss_pred CCCHHHHHHHHHHHH-HHHHC------CCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 888447999999999-98404------89977998367167999999998
Q gi|254780976|r 82 SEGPRVHSTRAFVHN-MIDRK------VYVPFVFWDERLTTVSAQQILID 124 (160)
Q Consensus 82 ~~~~~~~~v~~f~~~-L~~~~------~~l~v~~~DEr~TS~~A~~~l~~ 124 (160)
+..-....+|... ..+.. -.-.+..+|=.++...+-+.+..
T Consensus 80 --Gf~K~~f~~yl~~~~~~~~~k~~~~~~~~~~v~~tS~~~~~gl~EvL~ 127 (141)
T 2vgn_A 80 --GFYAKILXDKIFQYAEEEHNKKILDNKGXFFIAHCSTGYLQGINEVLK 127 (141)
T ss_dssp --TTHHHHHHHHHHHHHHHTTCHHHHTTGGGEEEEECSCSSTHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
T ss_conf --899999999999998776443454235517999835874677999985
No 55
>>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} (A:1-241)
Probab=58.30 E-value=12 Score=18.12 Aligned_cols=32 Identities=16% Similarity=0.012 Sum_probs=23.6
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEE----CCCEEE
Q ss_conf 98399998688768999630765110----121011
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFA----HPRPFL 47 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a----~Pl~~i 47 (160)
|+-+||||+|+..+=+++-|..+.+- .|+...
T Consensus 1 M~~~lgiDiGTts~Ka~l~d~~g~~i~~~~~~~~~~ 36 (241)
T 2dpn_A 1 MAFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQL 36 (241)
T ss_dssp --CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEE
T ss_pred CCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCEE
T ss_conf 968999984111311017808898999999746704
No 56
>>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} (A:1-96,A:187-278,A:474-509)
Probab=55.57 E-value=15 Score=17.48 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=23.2
Q ss_pred CCCCCCEEEEECCCCEEEEEEEEC--CCCEEC
Q ss_conf 589983999986887689996307--651101
Q gi|254780976|r 13 LKPNQPIASIDLGTKRIGLAISDP--GRRFAH 42 (160)
Q Consensus 13 ~~~~~riLgiD~G~kriGiAisd~--~~~~a~ 42 (160)
|..+.-+||||+|+.-+=.++-|. ...+|+
T Consensus 1 M~~~~~~lgiD~GTts~ka~l~d~~~G~iia~ 32 (224)
T 3jvp_A 1 MSLTKYTIGVDYGTESGRAVLIDLSNGQELAD 32 (224)
T ss_dssp ----CEEEEEEECSSEEEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEEECCCCEEEEE
T ss_conf 98780799997035452889998899909999
No 57
>>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* (A:1-85,A:223-247)
Probab=53.91 E-value=15 Score=17.54 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=20.8
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCE
Q ss_conf 9839999868876899963076511
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRF 40 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~ 40 (160)
+.-+||||+|+..+=.++-|..+.+
T Consensus 3 m~yvLgIDiGTts~Ra~l~D~~G~i 27 (110)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDEELNI 27 (110)
T ss_dssp CEEEEEEEECSSEEEEEEEETTCCE
T ss_pred CCEEEEEECCHHCCHHHEECCCCCE
T ss_conf 5599999731111012168399989
No 58
>>3g23_A Peptidase U61, LD-carboxypeptidase A; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.89A {Novosphingobium aromaticivorans DSM12444} (A:156-262)
Probab=53.63 E-value=13 Score=17.91 Aligned_cols=43 Identities=14% Similarity=0.155 Sum_probs=25.8
Q ss_pred HCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 16775899721357888884479999999999840489977998
Q gi|254780976|r 66 ENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFW 109 (160)
Q Consensus 66 ~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~ 109 (160)
.++.+||+|-|...+..+.+..........+... ..++||.+-
T Consensus 60 ~~i~gii~G~f~~~~~~~~~~~~~~~~~i~~~~~-~~~~Pv~~~ 102 (107)
T 3g23_A 60 AGIAGLRLGRVSDVPENDRPFGCSVEEXARHWCH-RAGIAFLGT 102 (107)
T ss_dssp TTCSEEEEEEEECCCSSSCCCSSCHHHHHHHHHH-HHTCCEEEE
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHH-CCCCCEEEC
T ss_conf 1398799973644887777656319999999873-379849989
No 59
>>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli} (A:1-108,A:251-276)
Probab=53.17 E-value=17 Score=17.24 Aligned_cols=82 Identities=6% Similarity=0.125 Sum_probs=48.3
Q ss_pred CCCEEEEEEEECCCCEEC-------------CCEEE--ECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH
Q ss_conf 887689996307651101-------------21011--047741568989999865167758997213578888844799
Q gi|254780976|r 25 GTKRIGLAISDPGRRFAH-------------PRPFL--VRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHS 89 (160)
Q Consensus 25 G~kriGiAisd~~~~~a~-------------Pl~~i--~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~ 89 (160)
++++||+.+.+....+-. ...++ .............+.+.++++++||+--- +.+. ..
T Consensus 1 ss~~Igvi~~~~~~~f~~~i~~gi~~~a~~~G~~l~i~~~~~d~~~e~~~i~~l~~~~vDGIIi~~~---~~~~--~~-- 73 (134)
T 2vk2_A 1 APLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPV---VATG--WE-- 73 (134)
T ss_dssp -CCEEEEEECCCCSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCS---SSSS--CH--
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECC---CCCC--CH--
T ss_conf 9849999968998999999999999999985998999958999999999999999759999998325---6541--16--
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCCCHHH
Q ss_conf 9999999984048997799836716799
Q gi|254780976|r 90 TRAFVHNMIDRKVYVPFVFWDERLTTVS 117 (160)
Q Consensus 90 v~~f~~~L~~~~~~l~v~~~DEr~TS~~ 117 (160)
...+.+. ..++||.++|.......
T Consensus 74 --~~i~~~~--~~~iPVV~id~~~~~~~ 97 (134)
T 2vk2_A 74 --PVLKEAK--DAEIPVFLLDRSIDVKD 97 (134)
T ss_dssp --HHHHHHH--HTTCCEEEESSCCCCSC
T ss_pred --HHHHHHH--HCCCCEEEECCCCCCCC
T ss_conf --8899998--61997577445445555
No 60
>>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} (A:1-244)
Probab=51.63 E-value=17 Score=17.14 Aligned_cols=23 Identities=22% Similarity=0.232 Sum_probs=19.7
Q ss_pred CEEEEECCCCEEEEEEEECCCCE
Q ss_conf 39999868876899963076511
Q gi|254780976|r 18 PIASIDLGTKRIGLAISDPGRRF 40 (160)
Q Consensus 18 riLgiD~G~kriGiAisd~~~~~ 40 (160)
-+||||+|+..+=+++-|..+.+
T Consensus 3 ~~lgID~GTts~ka~l~d~~g~~ 25 (244)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGEI 25 (244)
T ss_dssp EEEEEEECSSEEEEEEECTTSCE
T ss_pred EEEEEEECCCCCHHEEECCCCCE
T ss_conf 99999711202012078398989
No 61
>>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} (A:189-270)
Probab=49.93 E-value=19 Score=16.93 Aligned_cols=63 Identities=13% Similarity=0.229 Sum_probs=42.7
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 9999865167758997213578888844799999999998404899779983671679999999986986
Q gi|254780976|r 59 LLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVS 128 (160)
Q Consensus 59 l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~ 128 (160)
+.-+.++|++..+ |. ++.+.. +..+.+..+.+.+. .-++++.|+++..+++.|+..-.+.|.+
T Consensus 12 f~Y~a~~ygl~~~--~~-i~~~~e--ps~~~i~~l~~~ik--~~~i~~if~e~~~~~k~~~~ia~etg~~ 74 (82)
T 1pq4_A 12 WAYFARDYNLVQI--PI-EVEGQE--PSAQELKQLIDTAK--ENNLTMVFGETQFSTKSSEAIAAEIGAG 74 (82)
T ss_dssp CHHHHHHTTCEEE--ES-CBTTBC--CCHHHHHHHHHHHH--TTTCCEEEEETTSCCHHHHHHHHHHTCE
T ss_pred HHHHHHHCCCCEE--EC-CCCCCC--CCHHHHHHHHHHHH--HCCCCEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 8999996799352--04-467889--99899999999999--7499889972899919999999980998
No 62
>>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} (A:)
Probab=45.31 E-value=22 Score=16.49 Aligned_cols=83 Identities=12% Similarity=0.213 Sum_probs=55.4
Q ss_pred EECCCEEEECCCCC------HHHH---HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE-
Q ss_conf 10121011047741------5689---8999986516775899721357888884479999999999840489977998-
Q gi|254780976|r 40 FAHPRPFLVRKKVT------QTAL---ELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFW- 109 (160)
Q Consensus 40 ~a~Pl~~i~~~~~~------~~~~---~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~- 109 (160)
...|+-+..|-... ..+. +=...+++.++++||+|. ++.||+-..- . .++|++..-++|++|.
T Consensus 50 ~~ipv~vMIRPR~gdF~Ys~~E~~~M~~di~~~~~~GadGvVfG~-L~~dg~iD~~--~----~~~Li~~a~~~~vTFHR 122 (256)
T 1twd_A 50 VTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGV-LDVDGNVDXP--R----XEKIXAAAGPLAVTFHR 122 (256)
T ss_dssp CCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECC-BCTTSSBCHH--H----HHHHHHHHTTSEEEECG
T ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE-ECCCCCCCHH--H----HHHHHHHHCCCCEEEEE
T ss_conf 499727998337998878989999999999999985998137867-8888885499--9----99999986446736611
Q ss_pred --CCCCCHHHHHHHHHHCCCCH
Q ss_conf --36716799999999869864
Q gi|254780976|r 110 --DERLTTVSAQQILIDMNVSR 129 (160)
Q Consensus 110 --DEr~TS~~A~~~l~~~g~~~ 129 (160)
|+----.+|-+.|.+.|..+
T Consensus 123 AfD~~~d~~~al~~L~~lG~~r 144 (256)
T 1twd_A 123 AFDXCANPLYTLNNLAELGIAR 144 (256)
T ss_dssp GGGGCSCHHHHHHHHHHHTCCE
T ss_pred HHHHCCCHHHHHHHHHHCCCCE
T ss_conf 2354088999999998669786
No 63
>>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} (A:1-120,A:236-249)
Probab=44.00 E-value=23 Score=16.37 Aligned_cols=88 Identities=10% Similarity=0.100 Sum_probs=45.8
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEEEC-CCCCHHHHHHHHHHHH--HCCCEEEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 839999868876899963076511012101104-7741568989999865--1677589972135788888447999999
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFLVR-KKVTQTALELLSFITT--ENIAAFIIGLPLNMNGSEGPRVHSTRAF 93 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~-~~~~~~~~~l~~ii~e--~~i~~iVvGlP~~~~g~~~~~~~~v~~f 93 (160)
..+|.||.|-.|+=.|+-+......+..-.-.. .........+..+... .++..++++-= . ....+....+
T Consensus 3 ~m~L~IDiGNT~iK~a~~~~~~~~~~~~~~t~~~~~~~el~~~l~~~~~~~~~~i~~v~isSV-----v-p~~~~~~~~~ 76 (134)
T 3bex_A 3 PMYLLVDVGNTHSVFSITEDGKTFRRWRLSTGVFQTEDELFSHLHPLLGDAMREIKGIGVASV-----V-PTQNTVIERF 76 (134)
T ss_dssp CEEEEEEECSSEEEEEEESSSSSCEEEEEECCTTCCHHHHHHHHHHHHGGGGGGEEEEEEEES-----C-HHHHHHHHHH
T ss_pred CEEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHCCEEEECCC-----C-CHHHHHHHHH
T ss_conf 629999927771289999899999999953787678899999999985010443333533125-----8-5689999999
Q ss_pred HHHHHHHCCCCCEEEECCCCC
Q ss_conf 999984048997799836716
Q gi|254780976|r 94 VHNMIDRKVYVPFVFWDERLT 114 (160)
Q Consensus 94 ~~~L~~~~~~l~v~~~DEr~T 114 (160)
... .++++..+.+..-.
T Consensus 77 ~~~----~~~~~~~~~~~~~~ 93 (134)
T 3bex_A 77 SQK----YFHISPIWVKAKNG 93 (134)
T ss_dssp HHH----HHSCCCEECCCCSS
T ss_pred HHH----HCCCCEEEEECCCC
T ss_conf 999----55996599946778
No 64
>>2pfs_A USP, universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.25A {Nitrosomonas europaea atcc 19718} (A:)
Probab=43.42 E-value=24 Score=16.32 Aligned_cols=52 Identities=8% Similarity=0.045 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 5689899998651677589972135788888447999999999984048997799836
Q gi|254780976|r 54 QTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDE 111 (160)
Q Consensus 54 ~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DE 111 (160)
.....|.+.+++.+++.+|+|-.- .+......-..+..+.. ...+||..+-.
T Consensus 96 ~~~~~i~~~a~~~~~dliv~g~~~-----~~~~~~~~gs~~~~li~-~~~~PVlvv~~ 147 (150)
T 2pfs_A 96 EPREEIIRIAEQENVDLIVVGSHG-----RHGLALLLGSTANSVLH-YAKCDVLAVRL 147 (150)
T ss_dssp CHHHHHHHHHHHTTCSEEEEEEC---------------CHHHHHHH-HCSSEEEEEEC
T ss_pred CHHHHHHHHHHHCCCCEEEEECCC-----CCCCCCEECCHHHHHHH-CCCCCEEEECC
T ss_conf 889999999997398379996899-----99642462778999985-37998999905
No 65
>>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str} (A:1-235)
Probab=42.47 E-value=25 Score=16.23 Aligned_cols=61 Identities=10% Similarity=0.134 Sum_probs=42.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC
Q ss_conf 7741568989999865167758997213578888844799999999998404899779983671
Q gi|254780976|r 50 KKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERL 113 (160)
Q Consensus 50 ~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~ 113 (160)
........++....++..++.+++..|.-.. ..+-+.+.++.+.+.+..+++||.+++--.
T Consensus 101 ~~~t~~~i~~a~~A~~~Gadavlv~~P~~~~---~~~~~~i~~~~~~ia~~~~~~pi~iyn~P~ 161 (235)
T 2hmc_A 101 AVNTASAVAHAVHAQKVGAKGLXVIPRVLSR---GSVIAAQKAHFKAILSAAPEIPAVIYNSPY 161 (235)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCCSSS---TTCHHHHHHHHHHHHHHSTTSCEEEEEBGG
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCC---CCCCHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf 0137788888878998288502220011233---354156899998663158774488870344
No 66
>>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, glycerol metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis KOD1} (O:1-238)
Probab=42.00 E-value=25 Score=16.18 Aligned_cols=24 Identities=25% Similarity=0.238 Sum_probs=20.4
Q ss_pred CCEEEEECCCCEEEEEEEECCCCE
Q ss_conf 839999868876899963076511
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRF 40 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~ 40 (160)
.-+||||+|+..+=+++-|..+.+
T Consensus 3 ~~~lgiD~GTts~ka~l~d~~g~~ 26 (238)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDRESNI 26 (238)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCE
T ss_pred CEEEEEEECCCCEEEEEEECCCCE
T ss_conf 489999810304232379588999
No 67
>>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* (A:1-266,A:476-506)
Probab=38.77 E-value=28 Score=15.88 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=21.5
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCE
Q ss_conf 99839999868876899963076511
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRF 40 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~ 40 (160)
.+.-+||||+|+..+=+++-|..+..
T Consensus 3 m~~~vlgIDiGTtsvK~~v~d~~g~~ 28 (297)
T 3l0q_A 3 LASYFIGVDVGTGSARAGVFDLQGRX 28 (297)
T ss_dssp -CCEEEEEEECSSEEEEEEEETTSCE
T ss_pred CCCEEEEEEECCCCEEEEEECCCCCE
T ss_conf 78779999803545255588299989
No 68
>>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} (A:)
Probab=38.76 E-value=28 Score=15.87 Aligned_cols=51 Identities=10% Similarity=0.063 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 56898999986516775899721357888884479999999999840489977998
Q gi|254780976|r 54 QTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFW 109 (160)
Q Consensus 54 ~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~ 109 (160)
.....|.+.+++++++.+|+|..-. ++-.... .-..+..|.. ...+||..+
T Consensus 86 ~~~~~I~~~a~~~~~dliviG~~~~-~~~~~~~---~gs~~~~ll~-~~~~pVliv 136 (137)
T 2z08_A 86 VPAEAILQAARAEKADLIVMGTRGL-GALGSLF---LGSQSQRVVA-EAPCPVLLV 136 (137)
T ss_dssp SHHHHHHHHHHHTTCSEEEEESSCT-TCCSCSS---SCHHHHHHHH-HCSSCEEEE
T ss_pred CHHHHHHHHHHHHHHHHEEECCCCC-CCCCCCC---CCHHHHHHHH-CCCCCEEEE
T ss_conf 7489999987654445225556799-8511031---4709999996-489989995
No 69
>>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A (A:178-286)
Probab=36.26 E-value=31 Score=15.63 Aligned_cols=63 Identities=10% Similarity=0.114 Sum_probs=41.5
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 99865167758997213578888844799999999998404899779983671679999999986986
Q gi|254780976|r 61 SFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVS 128 (160)
Q Consensus 61 ~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~ 128 (160)
-+.++++...+-+ ...+....+..+.+..+.+.+.+ -++++.+.++.+++..++....+.|++
T Consensus 14 Yl~~~ygl~~~~~---~~~~~~~~ps~~~i~~l~~~ik~--~~i~~i~~e~~~~~~~~~~ia~~~~~~ 76 (109)
T 3gi1_A 14 YLAKRFGLKQLGI---SGISPEQEPSPRQLKEIQDFVKE--YNVKTIFAEDNVNPKIAHAIAKSTGAK 76 (109)
T ss_dssp HHHHHTTCEEEEE---ECSCC---CCHHHHHHHHHHHHH--TTCCEEEECTTSCTHHHHHHHHTTTCE
T ss_pred HHHHHCCCEEEEC---CCCCCCCCCCHHHHHHHHHHHHH--CCCCEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 8999769827632---56687678998999999999997--599889995889939999999982998
No 70
>>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A, structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii OT3} (A:)
Probab=35.80 E-value=31 Score=15.59 Aligned_cols=59 Identities=14% Similarity=0.059 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH
Q ss_conf 5689899998651677589972135788888447999999999984048997799836716799
Q gi|254780976|r 54 QTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVS 117 (160)
Q Consensus 54 ~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~ 117 (160)
.....|.+.+++.+++.+|+|-+-.- .......-.++..+.. ...+||..+...+...+
T Consensus 104 ~~~~~I~~~a~~~~~dliv~G~~~~~----~~~~~~~gs~~~~i~~-~~~~pVlvv~~~~~~~~ 162 (170)
T 2dum_A 104 IPWDEIVKVAEEENVSLIILPSRGKL----SLSHEFLGSTVMRVLR-KTKKPVLIIKEVDENEL 162 (170)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCCC----C--TTCCCHHHHHHHH-HCSSCEEEECCCCCC--
T ss_pred CHHHHHHHHHHCCCCEEEEEECCCCC----CCCCCCCCCHHHHHHH-CCCCCEEEECCCCCCCC
T ss_conf 32655556541367507998536898----6554500769999996-28998999868744345
No 71
>>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} (A:1-76,A:372-405,A:594-607)
Probab=35.74 E-value=31 Score=15.58 Aligned_cols=60 Identities=15% Similarity=0.151 Sum_probs=32.4
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEECCCEE--EEC---CC----CCHHHHHHHHHHHHH-----CCCEEEEEE
Q ss_conf 9839999868876899963076511012101--104---77----415689899998651-----677589972
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPF--LVR---KK----VTQTALELLSFITTE-----NIAAFIIGL 75 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a~Pl~~--i~~---~~----~~~~~~~l~~ii~e~-----~i~~iVvGl 75 (160)
|..+.|||.|+.++=+.+.+-...-..-+.+ .+. +. .+.....|.+.+++- .+..++++.
T Consensus 1 MkiivgIDIGSSkv~avIaev~dg~i~VLG~G~~~S~GiKG~I~dIe~a~~aI~~AI~~AE~~ag~i~~vvv~~ 74 (124)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGMKGTRDNIAGTLAALEQALAKTPWSMSDVSRIYLNE 74 (124)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSSTTSGGGHHHHHHHHHHHHTTSSCCGGGEEEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECC
T ss_conf 94799996077631589999648953796225456677567477899999999999997199721001145112
No 72
>>3cym_A Uncharacterized protein BAD_0989; structural genomics, unknown function, ribonuclease D, exonuclease; 2.10A {Bifidobacterium adolescentis ATCC15703} (A:1-219)
Probab=34.04 E-value=33 Score=15.42 Aligned_cols=64 Identities=11% Similarity=-0.024 Sum_probs=39.6
Q ss_pred HHHHHHHCCCCCCEEEEEC--------CCCEEEEEEEECCCCEECC-CEEEECCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 8999983589983999986--------8876899963076511012-101104774156898999986516775899
Q gi|254780976|r 6 IEDLVKSLKPNQPIASIDL--------GTKRIGLAISDPGRRFAHP-RPFLVRKKVTQTALELLSFITTENIAAFII 73 (160)
Q Consensus 6 ~~~~~~~~~~~~riLgiD~--------G~kriGiAisd~~~~~a~P-l~~i~~~~~~~~~~~l~~ii~e~~i~~iVv 73 (160)
+++++..+.....++|+|. +.+-+|+++|......... ..... ......+..+.....+..+..
T Consensus 27 l~~~i~~l~~~~~~ia~d~E~~~~~~~~~~i~~i~i~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~~~i~kv~~ 99 (219)
T 3cym_A 27 FRDYCSELASSHGSLAADAERASGFRYGHEDWLVQFKRDGAGIGLLDPQALA----AAGADWNDFNRAVGDAVWILH 99 (219)
T ss_dssp HHHHHHHHHSCEEEEEEEEEECTTTSSSCCEEEEEEEEETTEEEEECHHHHH----HTTCCHHHHHHHHTTCEEEES
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCC----CCCHHHHHHHHHHCCCCEEEE
T ss_conf 9999999962798389989857887588806999985789877998345566----533459999986379819986
No 73
>>3hh8_A Metal ABC transporter substrate-binding lipoprotein; metal binding, cell membrane, copper, copper transport, ION transport; 1.87A {Streptococcus pyogenes serotype M1} PDB: 1psz_A (A:180-294)
Probab=33.44 E-value=34 Score=15.36 Aligned_cols=64 Identities=8% Similarity=0.102 Sum_probs=41.3
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCH
Q ss_conf 998651677589972135788888447999999999984048997799836716799999999869864
Q gi|254780976|r 61 SFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSR 129 (160)
Q Consensus 61 ~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~ 129 (160)
-+.+.++...+ | +...+....+..+.+..+.+.+. .-++++.|++..+++..++..-.+.|.+.
T Consensus 16 Y~~~~ygl~~~--~-~~~~~~~~eps~~~i~~l~~~ik--~~~i~~if~e~~~~~~~~~~ia~~~~~~~ 79 (115)
T 3hh8_A 16 YFSKAYGVPSA--Y-IWEINTEEEGTPDQISSLIEKLK--VIKPSALFVESSVDRRPMETVSKDSGIPI 79 (115)
T ss_dssp HHHHHHTCCEE--E-EESSCCSCCCCHHHHHHHHHHHH--HSCCSCEEEETTSCSHHHHHHHHHHCCCE
T ss_pred HHHHHCCCCEE--C-CCCCCCCCCCCHHHHHHHHHHHH--HCCCCEEEECCCCCHHHHHHHHHHHCCCE
T ss_conf 99998698310--3-55657765557799999999976--05875899738899399999999809976
No 74
>>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} (A:202-291)
Probab=32.73 E-value=35 Score=15.28 Aligned_cols=65 Identities=8% Similarity=0.164 Sum_probs=44.7
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 9999865167758997213578888844799999999998404899779983671679999999986986
Q gi|254780976|r 59 LLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVS 128 (160)
Q Consensus 59 l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~ 128 (160)
+.-+.++|+...+-+ +..+....+..+.+..+.+.+. .-++++.|+++.+++..++..-.+.|++
T Consensus 13 f~Yf~~~ygl~~~~~---~~~~~~~eps~~~i~~l~~~ik--~~~i~~if~e~~~~~k~~~~ia~~~g~~ 77 (90)
T 1xvl_A 13 FSYLARDYGMEEIYM---WPINAEQQFTPKQVQTVIEEVK--TNNVPTIFCESTVSDKGQKQVAQATGAR 77 (90)
T ss_dssp THHHHHHTTCEEEEE---ESSSSSCSCCHHHHHHHHHHHH--TTTCSEEEEETTSCSHHHHHHHTTTCCE
T ss_pred HHHHHHHCCCEEEEE---CCCCCCCCCCHHHHHHHHHHHH--HCCCCEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 146898679836640---2668877899889999999876--3488589973889919999999985997
No 75
>>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus VF5} (A:1-136,A:299-315)
Probab=32.46 E-value=36 Score=15.26 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=57.6
Q ss_pred CCCCCCEEEEECCCCEEEEEEEECCCCEECCCEEEEC-----CC--------------CCHHHHHHHHHHHHHCCCEE-E
Q ss_conf 5899839999868876899963076511012101104-----77--------------41568989999865167758-9
Q gi|254780976|r 13 LKPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVR-----KK--------------VTQTALELLSFITTENIAAF-I 72 (160)
Q Consensus 13 ~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~-----~~--------------~~~~~~~l~~ii~e~~i~~i-V 72 (160)
-.++.++-+||.|+--+=+.|.|....-..++..... .+ .-+.+..+.+++++|+++.+ +
T Consensus 8 ~~~~~~~AvIDiGSNsirL~I~e~~~~~~~~i~~~k~~vrLg~~~~~~g~i~~e~i~r~~~al~~f~~~~~~~~v~~i~~ 87 (153)
T 1t6c_A 8 NKPIMRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVERVKA 87 (153)
T ss_dssp --CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 88866899999754408999997069974114222478750246532598199999999999999999987505455997
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 972135788888447999999999984048997799836
Q gi|254780976|r 73 IGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDE 111 (160)
Q Consensus 73 vGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DE 111 (160)
++-.-- ..+.-...|...+ .+.++++|...+.
T Consensus 88 vATsA~------R~A~N~~e~l~~I-~~~tGi~i~iIsg 119 (153)
T 1t6c_A 88 VATEAI------RRAKNAEEFLERV-KREVGLVVEVITP 119 (153)
T ss_dssp EECHHH------HTSTTHHHHHHHH-HHHTCCCEEECCH
T ss_pred EHHHHH------HHHHHHHHHHHHH-HHHHCCCEEEEEH
T ss_conf 316999------9734159999999-9986995288419
No 76
>>3hz6_A Xylulokinase; xylulose, structural genomic, manolate, transferase, structural genomics, PSI-2, protein structure initiative; HET: ADP XUL; 1.65A {Chromobacterium violaceum} (A:1-241)
Probab=31.67 E-value=37 Score=15.18 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=24.7
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEE----CCCEEEE
Q ss_conf 98399998688768999630765110----1210110
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFA----HPRPFLV 48 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a----~Pl~~i~ 48 (160)
..-+||||+|+.-+=.++-|..+... .+.+...
T Consensus 4 ~~~vlgiDiGTts~Ka~l~d~~g~vv~~~~~~~~~~~ 40 (241)
T 3hz6_A 4 AFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYG 40 (241)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBS
T ss_pred CEEEEEEEECCCCEEHEEEECCCCEEEEEEEECCCCC
T ss_conf 4279999850011012068288999999998357256
No 77
>>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis} (A:190-271)
Probab=31.00 E-value=38 Score=15.11 Aligned_cols=66 Identities=8% Similarity=0.166 Sum_probs=46.5
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 89999865167758997213578888844799999999998404899779983671679999999986986
Q gi|254780976|r 58 ELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVS 128 (160)
Q Consensus 58 ~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~ 128 (160)
.+.-+.++|++..+ |. ..++....+..+.+..+.+.+ +.-++++.|+++.++++.|+..-.+.|.+
T Consensus 10 af~Yf~~~ygl~~~--~~-~~~~~~~~ps~~~i~~l~~~i--k~~~i~~if~e~~~~~k~~~~ia~~~g~~ 75 (82)
T 2o1e_A 10 AFGYLAKEYGLKQV--PI-AGLSPDQEPSAASLAKLKTYA--KEHNVKVIYFEEIASSKVADTLASEIGAK 75 (82)
T ss_dssp TTHHHHHHTTCEEE--EC-SSCCSSSCCCHHHHHHHHHHT--TSSCCCEEECSSCCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCEEE--EE-CCCCCCCCCCHHHHHHHHHHH--HHCCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 36668874684476--40-235652221335799999876--52588689994888949999999971997
No 78
>>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus} (A:1-115,A:228-286)
Probab=30.97 E-value=38 Score=15.11 Aligned_cols=121 Identities=18% Similarity=0.158 Sum_probs=73.0
Q ss_pred CCCCEEEEECCCC--------------EEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 9983999986887--------------68999630765110121011047741568989999865167758997213578
Q gi|254780976|r 15 PNQPIASIDLGTK--------------RIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMN 80 (160)
Q Consensus 15 ~~~riLgiD~G~k--------------riGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~ 80 (160)
.+.+|..+|=|-- .--+.++|... .|...-......+...++.+.+.+++++.+||.=
T Consensus 21 ~~~~IgifdsG~Ggltv~~~i~~~lp~~~~iy~~D~~~---~Pyg~~s~~~i~~~~~~~~~~L~~~g~~~iviaC----- 92 (174)
T 2jfq_A 21 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGR---CPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIAC----- 92 (174)
T ss_dssp CCSCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECTTT---CCCTTSCHHHHHHHHHHHHHHHTTSCCSEEEECC-----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCC---CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC-----
T ss_conf 79988999689777999999999789999899944888---9888899999999999999999854887799814-----
Q ss_pred CCCCHHHHHHH-HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHH-HH------HHHHHHHHHHHHHHHH
Q ss_conf 88884479999-999999840489977998367167999999998698644546-43------7899899999999968
Q gi|254780976|r 81 GSEGPRVHSTR-AFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRI-QK------VDSIAAALILQEVLDR 151 (160)
Q Consensus 81 g~~~~~~~~v~-~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~~k-~~------iD~~AA~iILq~~Ld~ 151 (160)
.... .+...|. ..+++||.-+==.-+..+.++.|.+.++-....+ .. -|...-.-+-+.||..
T Consensus 93 -------NTa~a~~l~~l~-~~~~iPii~~ia~~vA~~v~~~L~~~~Ll~~~~~~g~~rF~tTgd~~~F~~ia~~~Lg~ 163 (174)
T 2jfq_A 93 -------NTATAVALEYLQ-KTLSISVIGVIGLETAREVSALLTFSNEHASYTEHPDHRFFATGDTTHITNIIKEWLNL 163 (174)
T ss_dssp -------HHHHHHHHHHHH-HHCSSEEEESHHHHHHHHHHHHHHHTTCCCCCCSSCCCEEEESSCCHHHHHHHHHHHCC
T ss_pred -------CCHHHHHHHHHH-HCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf -------648999999998-51899779864899999999999865755456899876999899989999999997499
No 79
>>3fkq_A NTRC-like two-domain protein; RER070207001320, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: ATP 2PE; 2.10A {Eubacterium rectale} (A:1-138)
Probab=30.89 E-value=23 Score=16.44 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=34.9
Q ss_pred CCEEEEEEEECCCCEECCCEEEECCCCC--------HHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 8768999630765110121011047741--------5689899998651677589972
Q gi|254780976|r 26 TKRIGLAISDPGRRFAHPRPFLVRKKVT--------QTALELLSFITTENIAAFIIGL 75 (160)
Q Consensus 26 ~kriGiAisd~~~~~a~Pl~~i~~~~~~--------~~~~~l~~ii~e~~i~~iVvGl 75 (160)
--||=+||+|+....+.++--..+.+.. ...+.+.+.+++..++.++++-
T Consensus 19 ~~kIklaI~D~D~~Y~~rL~~yln~~~~~~f~v~aFt~~E~l~~~~~~~~iDiLLisE 76 (138)
T 3fkq_A 19 GXKIKVALLDKDKEYLDRLTGVFNTKYADKLEVYSFTDEKNAIESVKEYRIDVLIAEE 76 (138)
T ss_dssp -CCEEEEEECSCHHHHHHHHHHHHHHTTTTEEEEEESCHHHHHHHHHHHTCSEEEEET
T ss_pred CCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEEECC
T ss_conf 6769999998979999999999735348846999937899999998617999899848
No 80
>>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A* (A:1-117,A:229-290)
Probab=30.18 E-value=39 Score=15.02 Aligned_cols=87 Identities=14% Similarity=0.100 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHH-
Q ss_conf 1568989999865167758997213578888844799999999998404899779983671679999999986986445-
Q gi|254780976|r 53 TQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKK- 131 (160)
Q Consensus 53 ~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g~~~k~- 131 (160)
.....++...+.+.+++.+||-- |..+-. ....| +..+++||.-+-=.-|..++++.|...|+-...
T Consensus 72 ~~~~~~~~~~l~~~~~~~iViAC--------NTasa~---al~~l-~~~~~ipvi~~~A~etA~~v~~~L~~~gLl~~~~ 139 (179)
T 2vvt_A 72 VQFTWEMADFLLKKRIKMLVIAC--------NTATAV---ALEEI-KAALPIPVVGVIGAETVGEVSMLLDYFDIAHTPE 139 (179)
T ss_dssp HHHHHHHHHHHHTTTCSEEEECC--------HHHHHH---HHHHH-HHHCSSCEEESSHHHHHHHHHHHHHHTTCCCCC-
T ss_pred HHHHHHHHHHHHHCCCCCEEEEC--------CHHHHH---HHHHH-HHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999753886047623--------368899---99988-5335766673038999999999998647555766
Q ss_pred -HHHH------HHHHHHHHHHHHHHHH
Q ss_conf -4643------7899899999999968
Q gi|254780976|r 132 -RIQK------VDSIAAALILQEVLDR 151 (160)
Q Consensus 132 -~k~~------iD~~AA~iILq~~Ld~ 151 (160)
.... -|...=.-+-+.||..
T Consensus 140 ~~~g~~rFytTgd~e~F~~iA~~fLg~ 166 (179)
T 2vvt_A 140 APTQPHEFYTTGSAKMFEEIASSWLGI 166 (179)
T ss_dssp ----CCEEEESSCHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 899743999899989999999997599
No 81
>>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP, protein structure initiative; HET: MSE AMP; 2.46A {Arabidopsis thaliana} (A:)
Probab=28.67 E-value=41 Score=14.87 Aligned_cols=57 Identities=5% Similarity=-0.037 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH
Q ss_conf 56898999986516775899721357888884479999999999840489977998367167
Q gi|254780976|r 54 QTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTT 115 (160)
Q Consensus 54 ~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS 115 (160)
.....|.+.+++++++.+|+|-. |...-.....-..+..+.. ...+||..+-..+..
T Consensus 111 ~~~~~I~~~a~~~~~dliVlG~~----~~~~~~~~~~Gs~~~~vl~-~~~~pVlvV~~~~~~ 167 (175)
T 2gm3_A 111 DPKDVICQEVKRVRPDFLVVGSR----GLGRFQKVFVGTVSAFCVK-HAECPVXTIKRNADE 167 (175)
T ss_dssp CHHHHHHHHHHHHCCSEEEEEEC----CCC--------CHHHHHHH-HCSSCEEEEECCGGG
T ss_pred CHHHHHHHHHHHHCCCEEEECCC----CCCCCCCCCCCCHHHHHHH-CCCCCEEEEECCCCC
T ss_conf 88999999999835756885478----9986665623869999983-789898999689878
No 82
>>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutation, protein-DNA complex, DNA mispair, cancer, ABC transporter ATPase; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B* (B:190-381)
Probab=28.62 E-value=41 Score=14.86 Aligned_cols=55 Identities=7% Similarity=0.022 Sum_probs=37.1
Q ss_pred CCEEEEEC-------CCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 83999986-------887689996307651101210110477415689899998651677589972
Q gi|254780976|r 17 QPIASIDL-------GTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGL 75 (160)
Q Consensus 17 ~riLgiD~-------G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGl 75 (160)
.-+++|=. ..+++|+|+.|..+.--. +.-+. ......++...+...+|..||+.-
T Consensus 10 nyl~ai~~~~~~~~~~~~~iGla~iD~sTGe~~-~~~f~---d~~~~~~l~~~L~~~~P~EIi~~~ 71 (192)
T 2o8b_B 10 KYLLSLKEKEEDSSGHTRAYGVCFVDTSLGKFF-IGQFS---DDRHCSRFRTLVAHYPPVQVLFEK 71 (192)
T ss_dssp CEEEEEEEEECSCC-CCEEEEEEEECTTTCCEE-EEEEE---ECSSCHHHHHHHHHSCEEEEEEET
T ss_pred CEEEEEEECCCCCCCCCCEEEEEEEECCCCEEE-EEEEC---CCHHHHHHHHHHHHCCCHHHHCCC
T ss_conf 489999863455567787599999993558799-99955---842699999999856926542265
No 83
>>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} (A:1-121)
Probab=27.39 E-value=29 Score=15.83 Aligned_cols=16 Identities=38% Similarity=0.358 Sum_probs=12.2
Q ss_pred ECCCCEEEEEEEECCC
Q ss_conf 8688768999630765
Q gi|254780976|r 23 DLGTKRIGLAISDPGR 38 (160)
Q Consensus 23 D~G~kriGiAisd~~~ 38 (160)
|=+..|+|+||+|-.-
T Consensus 28 ~~~~pR~gVaIGd~Vl 43 (121)
T 1hyo_A 28 SNPKPRIGVAIGDQIL 43 (121)
T ss_dssp SCCSCEEEEEETTEEE
T ss_pred CCCCCEEEEEECCEEE
T ss_conf 9999448999899997
No 84
>>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} (A:1-168)
Probab=27.36 E-value=28 Score=15.89 Aligned_cols=57 Identities=7% Similarity=-0.067 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHHHHHHCCCEEEEEECCCCCC---CCCHHHHHHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 7415689899998651677589972135788---88844799999999998404899779983
Q gi|254780976|r 51 KVTQTALELLSFITTENIAAFIIGLPLNMNG---SEGPRVHSTRAFVHNMIDRKVYVPFVFWD 110 (160)
Q Consensus 51 ~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g---~~~~~~~~v~~f~~~L~~~~~~l~v~~~D 110 (160)
.....+..+.+.+...++..++++.|....+ ......+......+++..+ .++ .++|
T Consensus 109 ~~~~~l~~~i~~~~~~~~~v~l~t~~~~~~~~~~~~~~~~~~~~~~i~~~a~~-~~v--~~vD 168 (168)
T 1k7c_A 109 TFPAYLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEV-AGV--EYVD 168 (168)
T ss_dssp BHHHHHHHHHHHHHHTTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHH-HTC--EEEC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-CCC--EEEC
T ss_conf 88999999999888609969995477777654420155689999999999998-498--6852
No 85
>>1ig8_A Hexokinase PII, hexokinase B; mixed alpha beta, two domains, cleft, transferase; 2.20A {Saccharomyces cerevisiae} (A:75-211,A:459-486)
Probab=26.72 E-value=45 Score=14.65 Aligned_cols=53 Identities=17% Similarity=0.238 Sum_probs=29.3
Q ss_pred CCCEEEEECCCCEEEEEEEECCCC---------EECCCEEEECCCCCHHHHH----HHHHHHHHCC
Q ss_conf 983999986887689996307651---------1012101104774156898----9999865167
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRR---------FAHPRPFLVRKKVTQTALE----LLSFITTENI 68 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~---------~a~Pl~~i~~~~~~~~~~~----l~~ii~e~~i 68 (160)
++++|+||+|-.+.=++.-+-.+. ...|..+......++++.. |.+++.++..
T Consensus 5 ~G~fLAlDlGGTNlRV~lV~L~g~~~~~~~q~~~~ip~~~~~~~t~~~LFd~IA~~I~~fl~~~~~ 70 (165)
T 1ig8_A 5 SGDFLAIDLGGTNLRVVLVKLGGDRTFDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQFP 70 (165)
T ss_dssp EEEEEEEEECSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGCSCTHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 665699941798369999830367773666656406314442278188999999999986453123
No 86
>>1e4f_T Cell division protein FTSA; bacterial cell division, actin family; 1.9A {Thermotoga maritima} (T:1-86,T:168-189)
Probab=25.88 E-value=46 Score=14.56 Aligned_cols=89 Identities=13% Similarity=0.098 Sum_probs=47.9
Q ss_pred HHCCCCCCEEEEECCCCEEEEEEEECCCCEECC--CEEEECC--------CCCHHHHHHHHHHH------HHCCCEEEEE
Q ss_conf 835899839999868876899963076511012--1011047--------74156898999986------5167758997
Q gi|254780976|r 11 KSLKPNQPIASIDLGTKRIGLAISDPGRRFAHP--RPFLVRK--------KVTQTALELLSFIT------TENIAAFIIG 74 (160)
Q Consensus 11 ~~~~~~~riLgiD~G~kriGiAisd~~~~~a~P--l~~i~~~--------~~~~~~~~l~~ii~------e~~i~~iVvG 74 (160)
..++.+.-+.|||.|+.+|=+.+++....--.. ....+.. +.+.....|.+.++ ...+..+.+.
T Consensus 2 ~~M~k~~iiv~LDIGSskVk~iv~~~~~~~i~Ilg~g~~~s~Gi~kG~I~Die~~~~aI~~ai~~aE~~~g~~I~~V~vi 81 (108)
T 1e4f_T 2 IDLSKTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQKSLRSDFVI 81 (108)
T ss_dssp -----CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSEETTEESCHHHHHHHHHHHHHHHHHHHTSCCCSCEEE
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 87888982999998600689999999799999999888765211288168779999999999999998708986633999
Q ss_pred ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 2135788888447999999999984048997799
Q gi|254780976|r 75 LPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVF 108 (160)
Q Consensus 75 lP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~ 108 (160)
.|- ..+....|...|.+. ..-|..+
T Consensus 82 sG~--------~v~~~~~~~~~~~~~-~~~~~~~ 106 (108)
T 1e4f_T 82 SFS--------SVKVYEMFYNFLQDT-VKSPFQL 106 (108)
T ss_dssp EEC--------CTHHHHHHHHHHHHH-SCSCEEE
T ss_pred EEC--------CCHHHHHHHHHHHHH-CCCEEEE
T ss_conf 705--------429999999999981-9973687
No 87
>>3fdx_A Putative filament protein / universal stress protein F; structural genomics, APC60640.1, PSI-2, protein structure initiative; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* (A:)
Probab=25.70 E-value=47 Score=14.54 Aligned_cols=21 Identities=14% Similarity=0.131 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHCCCEEEEEE
Q ss_conf 689899998651677589972
Q gi|254780976|r 55 TALELLSFITTENIAAFIIGL 75 (160)
Q Consensus 55 ~~~~l~~ii~e~~i~~iVvGl 75 (160)
....|.+.+++++++.+|+|-
T Consensus 94 ~~~~i~~~a~~~~~dliVlG~ 114 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIAS 114 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHHHHCCCEEEECC
T ss_conf 789999999871678899737
No 88
>>2qi2_A Pelota, cell division protein pelota related protein; DOM34, cell cycle; 2.90A {Thermoplasma acidophilum} (A:129-240)
Probab=24.32 E-value=50 Score=14.38 Aligned_cols=94 Identities=15% Similarity=0.030 Sum_probs=57.3
Q ss_pred CEEEEECCCCEEEEEEEECCCCEECCCEEEECC--C----CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHH
Q ss_conf 399998688768999630765110121011047--7----4156898999986516775899721357888884479999
Q gi|254780976|r 18 PIASIDLGTKRIGLAISDPGRRFAHPRPFLVRK--K----VTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTR 91 (160)
Q Consensus 18 riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~--~----~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~ 91 (160)
-++.+|.|...+++--+......+.--..++.+ + ...++.++.+.+.++ ++.+||+=| +. .-.
T Consensus 6 ~~v~id~geA~i~~l~~~~~~~~~~i~~~ip~K~~~~~~~~~~Ff~~v~~~l~~~-~~~iiiaGP-------Gf---~K~ 74 (112)
T 2qi2_A 6 TAVAMDEDEAQIFLIHPYGIQQVGTVYSGRSGKYAEGNYSEASYFDQIVNALKNY-SNSIIILGP-------GF---ARD 74 (112)
T ss_dssp EEEEECSSEEEEEEECSSCEEEEEEEECCHHHHC----CCHHHHHHHHHHHHHTC-CSCEEEEES-------SS---HHH
T ss_pred EEEEEECCCEEEEEECCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-CCEEEEECC-------HH---HHH
T ss_conf 9999805838999974888999999992599875667578999999999999864-776999777-------58---999
Q ss_pred HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 99999984048997799836716799999999
Q gi|254780976|r 92 AFVHNMIDRKVYVPFVFWDERLTTVSAQQILI 123 (160)
Q Consensus 92 ~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~ 123 (160)
+|.+-|..+..+ .+..+|-.++....-+.+.
T Consensus 75 ~f~~yl~~~~~~-~~~~~~~s~~~~~Gl~Evl 105 (112)
T 2qi2_A 75 RFARYCAQRGVN-VIGSFPANRTDSGAVYEFI 105 (112)
T ss_dssp HHHHHHHHTSCC-CSCCEECSSSSHHHHHHHH
T ss_pred HHHHHHHHHHHH-CEEEEEEEECCCHHHHHHH
T ss_conf 999999864110-0247887406835661114
No 89
>>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis} (A:1-96,A:208-267)
Probab=23.79 E-value=51 Score=14.32 Aligned_cols=98 Identities=16% Similarity=0.110 Sum_probs=61.3
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH
Q ss_conf 12101104774156898999986516775899721357888884479999999999840489977998367167999999
Q gi|254780976|r 42 HPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQI 121 (160)
Q Consensus 42 ~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~ 121 (160)
+|++.-..........++...+.+.+++.+||-- |..+-.+ ...| +..+++||.-+==.-|..+..+.
T Consensus 40 ~PYG~ks~~~i~~~~~~~~~~l~~~~~k~iViAC--------NTasa~a---l~~l-r~~~~iPvigvia~etA~~v~~~ 107 (156)
T 2gzm_A 40 CPYGPRSREEVRQFTWEMTEHLLDLNIKMLVIAC--------NTATAVV---LEEM-QKQLPIPVVGVIGDETAREVSTI 107 (156)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECC--------HHHHHHH---HHHH-HHHCSSCEEESHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECC--------CHHHHHH---HHHH-HHHCCCCEEEEEHHHHHHHHHHH
T ss_conf 9989999999999999999999861678799726--------2788999---9999-97489887987679999999999
Q ss_pred HHHCCCCHHHHHHH-------HHHHHHHHHHHHHHHH
Q ss_conf 99869864454643-------7899899999999968
Q gi|254780976|r 122 LIDMNVSRKKRIQK-------VDSIAAALILQEVLDR 151 (160)
Q Consensus 122 l~~~g~~~k~~k~~-------iD~~AA~iILq~~Ld~ 151 (160)
|...++-....... -|...=.-|-+.||.+
T Consensus 108 L~~~~ll~~~~~~~~~~f~~Tg~~~~F~~ia~~fLg~ 144 (156)
T 2gzm_A 108 LYHSKMLNEGEEQSDHLFLTTGKIGLFKEIASKWFGQ 144 (156)
T ss_dssp HHHTTCCCCSSCCCCCEEEESSCHHHHHHHHHHHTCC
T ss_pred HHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 9864765567899787999899989999999997599
No 90
>>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis} (A:1-104,A:238-283)
Probab=23.40 E-value=52 Score=14.27 Aligned_cols=80 Identities=14% Similarity=0.158 Sum_probs=45.4
Q ss_pred CCEEEEEEEECCCCEE-------------CCCEEE--ECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHH
Q ss_conf 8768999630765110-------------121011--0477415689899998651677589972135788888447999
Q gi|254780976|r 26 TKRIGLAISDPGRRFA-------------HPRPFL--VRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHST 90 (160)
Q Consensus 26 ~kriGiAisd~~~~~a-------------~Pl~~i--~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v 90 (160)
.|+||+.+.+....+. ..+.++ ...+......+..+.+.+++++++++--+ +.+...
T Consensus 1 ~ktIgii~~~~~~~f~~~ii~gi~~aa~~~G~~l~i~~~~~~~~~e~~~i~~ll~~~vdgIIi~~~---~~~~~~----- 72 (150)
T 2ioy_A 1 MKTIGLVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPV---DSDAVV----- 72 (150)
T ss_dssp -CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS---STTTTH-----
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCC-----
T ss_conf 929999857898989999999999999975999999938999999999999998623233445663---222221-----
Q ss_pred HHHHHHHHHHCCCCCEEEECCCCCHH
Q ss_conf 99999998404899779983671679
Q gi|254780976|r 91 RAFVHNMIDRKVYVPFVFWDERLTTV 116 (160)
Q Consensus 91 ~~f~~~L~~~~~~l~v~~~DEr~TS~ 116 (160)
...+.+.+ .++|+.++|-...+.
T Consensus 73 -~~~~~l~~--~gIPvV~id~~~~~~ 95 (150)
T 2ioy_A 73 -TAIKEANS--KNIPVITIDRSANGG 95 (150)
T ss_dssp -HHHHHHHH--TTCCEEEESSCCSSS
T ss_pred -CCCHHHHC--CCCEEEEEECCCCCC
T ss_conf -00002331--575289981577888
No 91
>>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A (A:1-231)
Probab=23.07 E-value=52 Score=14.23 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=34.0
Q ss_pred EEEEECCCCEEEEEEEECCCCEE----CCCEEEECCCC------CHHH----HHHHHHHHHHCCCEEE-EEEC
Q ss_conf 99998688768999630765110----12101104774------1568----9899998651677589-9721
Q gi|254780976|r 19 IASIDLGTKRIGLAISDPGRRFA----HPRPFLVRKKV------TQTA----LELLSFITTENIAAFI-IGLP 76 (160)
Q Consensus 19 iLgiD~G~kriGiAisd~~~~~a----~Pl~~i~~~~~------~~~~----~~l~~ii~e~~i~~iV-vGlP 76 (160)
+||||+|+.-+=+++-|..+.+- .|++....... ...+ ..+.+.+....+..++ ||.-
T Consensus 2 ~lgiDiGTts~Ka~l~d~~g~vv~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~~~~~~~~~~~~~i~~I~~s 74 (231)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIA 74 (231)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSCCTTCCEEEEE
T ss_pred EEEEEECCCCEEEEEEECCCCEEEEEEEECCEECCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 8999962225221278088989999998445145899838989999999999999999976695574799997
No 92
>>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} (A:1-150,A:307-320)
Probab=22.70 E-value=53 Score=14.19 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=17.6
Q ss_pred EEEEECCCCEEEEEEEECCCC
Q ss_conf 999986887689996307651
Q gi|254780976|r 19 IASIDLGTKRIGLAISDPGRR 39 (160)
Q Consensus 19 iLgiD~G~kriGiAisd~~~~ 39 (160)
++|||.|-..+=++.++....
T Consensus 2 iigiD~G~~~tK~~~~~~~~~ 22 (164)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGT 22 (164)
T ss_dssp EEEEEECSSEEEEEEECSSSC
T ss_pred EEEEECCCCCEEEEEEECCCE
T ss_conf 899986811499999919934
No 93
>>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis} (A:1-99,A:212-276)
Probab=22.35 E-value=54 Score=14.15 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=58.6
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH
Q ss_conf 12101104774156898999986516775899721357888884479999999999840489977998367167999999
Q gi|254780976|r 42 HPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQI 121 (160)
Q Consensus 42 ~Pl~~i~~~~~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~ 121 (160)
+|++.-......+...++...+.+++++.+||.= |..+-.+. ..| +..+.+||..+.|- |..+..+.
T Consensus 44 ~PYG~k~~~~i~~~~~~~~~~l~~~~~~~iViAC--------NTasa~al---~~l-r~~~~iPii~~a~a-vA~~l~~l 110 (164)
T 2dwu_A 44 CPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVAC--------NTAAAATL---AAL-QEALSIPVIGVAEE-TAIELSTI 110 (164)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHTTSCEEEEEECC--------HHHHHHHH---HHH-HHHCSSCEEESHHH-HHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC--------CHHHHHHH---HHH-HHCCCCCEEECHHH-HHHHHHHH
T ss_conf 9988899999999999999998625776899953--------72777418---999-74069877852489-99999999
Q ss_pred HHHCCCCHHHHHHH------HHHHHHHHHHHHHHHH
Q ss_conf 99869864454643------7899899999999968
Q gi|254780976|r 122 LIDMNVSRKKRIQK------VDSIAAALILQEVLDR 151 (160)
Q Consensus 122 l~~~g~~~k~~k~~------iD~~AA~iILq~~Ld~ 151 (160)
|...++.+...... =|...=.-+-+.||..
T Consensus 111 L~~~~L~~~~~~~~~rFytTGdp~~F~~ia~~fLg~ 146 (164)
T 2dwu_A 111 LQHKGILADNLNPKHRFFTTGSVSSFEHIAERWLGY 146 (164)
T ss_dssp HHHTTCCCCCSSCCCEEEESSCHHHHHHHHHHHHSS
T ss_pred HHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 986576546999886999899989999999997799
No 94
>>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} (A:14-156)
Probab=22.08 E-value=55 Score=14.11 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHCCCEEEEEE
Q ss_conf 89899998651677589972
Q gi|254780976|r 56 ALELLSFITTENIAAFIIGL 75 (160)
Q Consensus 56 ~~~l~~ii~e~~i~~iVvGl 75 (160)
...|.+++++.+++.+|+|-
T Consensus 95 ~~~i~~~~~~~~~dliV~G~ 114 (143)
T 3fg9_A 95 DVILEQVIPEFKPDLLVTGA 114 (143)
T ss_dssp HHHHHTHHHHHCCSEEEEET
T ss_pred HHHHHHHHHHHCCCEEEECC
T ss_conf 88751056874998999717
No 95
>>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis H37RV} (A:1-128)
Probab=20.92 E-value=58 Score=13.97 Aligned_cols=25 Identities=12% Similarity=0.226 Sum_probs=11.1
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 7758997213578888844799999999998
Q gi|254780976|r 68 IAAFIIGLPLNMNGSEGPRVHSTRAFVHNMI 98 (160)
Q Consensus 68 i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~ 98 (160)
...|+|+. |++ +.++.+-.++..+.
T Consensus 17 ~~~ILvav----D~S--~~s~~al~~a~~la 41 (128)
T 1tq8_A 17 YKTVVVGT----DGS--DSSXRAVDRAAQIA 41 (128)
T ss_dssp CCEEEEEC----CSS--HHHHHHHHHHHHHH
T ss_pred CCEEEEEE----CCC--HHHHHHHHHHHHHH
T ss_conf 99699998----999--89999999999998
No 96
>>2kt9_A Probable 30S ribosomal protein PSRP-3; structural genomics, northeast structural genomics consortium (NESG), target SGR46, PSI-2; NMR {Synechocystis SP} (A:)
Probab=20.38 E-value=60 Score=13.90 Aligned_cols=51 Identities=8% Similarity=-0.045 Sum_probs=37.3
Q ss_pred CCCCEEEEECCCCEEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 998399998688768999630765110121011047741568989999865
Q gi|254780976|r 15 PNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITT 65 (160)
Q Consensus 15 ~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~~~~~~~~~~~l~~ii~e 65 (160)
..+-+|-+=+..+.||+|+-+-.+.-.+|++....=-....|++|...++.
T Consensus 7 ~~rfvlKvlWle~niaiAvDQ~vg~~t~PLT~YfFWPr~DAWe~LK~~LEs 57 (116)
T 2kt9_A 7 HTSFILKVLWLDQNVAIAVDQIVGKGTSPLTSYFFWPRADAWQQLKDELEA 57 (116)
T ss_dssp CCCEEEEEEECSSCEEEEEEEEETTEEEECSCCEEETTSCHHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCEEEEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHC
T ss_conf 116899999845746898764317877767615326776599999999824
No 97
>>3js6_A Uncharacterized PARM protein; partition, segregation, filament; 1.95A {Staphylococcus aureus} (A:1-180,A:322-355)
Probab=20.30 E-value=60 Score=13.89 Aligned_cols=26 Identities=19% Similarity=0.220 Sum_probs=20.0
Q ss_pred CCCEEEEECCCCEEEEEEEECCCCEE
Q ss_conf 98399998688768999630765110
Q gi|254780976|r 16 NQPIASIDLGTKRIGLAISDPGRRFA 41 (160)
Q Consensus 16 ~~riLgiD~G~kriGiAisd~~~~~a 41 (160)
+..++|+|.|-..+-+++.+....++
T Consensus 3 nmliigiD~G~~~tK~~~~~~~~~fP 28 (214)
T 3js6_A 3 NVYVXALDFGNGFVKGKINDEKFVIP 28 (214)
T ss_dssp CEEEEEEEECSSEEEEEETTEEEEEE
T ss_pred CCCEEEEECCHHHEEEEECCCCEEEE
T ss_conf 98399999380239999998416988
No 98
>>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima} (A:)
Probab=20.23 E-value=60 Score=13.88 Aligned_cols=62 Identities=6% Similarity=0.030 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 89899998651677589972135788888447999999999984048997799836716799999999869
Q gi|254780976|r 56 ALELLSFITTENIAAFIIGLPLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMN 126 (160)
Q Consensus 56 ~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~~~~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l~~~g 126 (160)
..+-.+.+.++.++.+++-+-..+||- .+.+++.....++||.++-..-....+.+.+....
T Consensus 37 g~eAl~~~~~~~~dliilD~mp~~dG~---------e~~~~ir~~~~~~pii~lT~~~~~~~~~~a~~~Ga 98 (142)
T 2qxy_A 37 EQEAFTFLRREKIDLVFVDVFEGEESL---------NLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGA 98 (142)
T ss_dssp HHHHHHHHTTSCCSEEEEECTTTHHHH---------HHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHH---------HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf 799999998318889972357750499---------99999999789997899974588899999998699
Done!