HHsearch results for GI: 254780976 and protein with PDBid: 1hjr_A

>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=97.75  E-value=0.00093  Score=42.05  Aligned_cols=100  Identities=14%  Similarity=0.125  Sum_probs=61.9

Q ss_pred             CEEEEECCCCEEEEEEEECCCCEEC--CCEEEECCC------CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCH-HHH
Q ss_conf             3999986887689996307651101--210110477------4156898999986516775899721357888884-479
Q gi|254780976|r   18 PIASIDLGTKRIGLAISDPGRRFAH--PRPFLVRKK------VTQTALELLSFITTENIAAFIIGLPLNMNGSEGP-RVH   88 (160)
Q Consensus        18 riLgiD~G~kriGiAisd~~~~~a~--Pl~~i~~~~------~~~~~~~l~~ii~e~~i~~iVvGlP~~~~g~~~~-~~~   88 (160)
                      =|||||+|..++|.|+-|..+.-..  -.+++..+.      .....+.+.+++++|+|+.+++=-|.-..+..+. ...
T Consensus         2 iILGiDPgl~~tG~avid~~~~~~~~i~~g~i~t~~~~~~~Rl~~I~~~l~~ii~~~~pd~vaiE~~f~~~n~~sa~~l~   81 (158)
T 1hjr_A            2 IILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLG   81 (158)
T ss_dssp             EEEEEECCSSEEEEEEEEEETTEEEEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHH
T ss_pred             EEEEECCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
T ss_conf             89998435585689999953987899986689779988799999999999999971397353698988623888999999


Q ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
Q ss_conf             9999999998404899779983671679999999
Q gi|254780976|r   89 STRAFVHNMIDRKVYVPFVFWDERLTTVSAQQIL  122 (160)
Q Consensus        89 ~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l  122 (160)
                      .++-.+... -...++|+..+    |-.+.++..
T Consensus        82 ~a~G~i~~~-~~~~~i~i~~~----~P~~vKk~v  110 (158)
T 1hjr_A           82 QARGVAIVA-AVNQELPVFEY----AARQVKQTV  110 (158)
T ss_dssp             HHHHHHHHH-HHTTTCCEEEE----EHHHHHHHH
T ss_pred             HHHHHHHHH-HHHCCCCCCCC----CHHHHHHHH
T ss_conf             999999999-99859960136----889999998