HHsearch results for GI: 254780976 and protein with PDBid: 1z05_A
>1z05_A Transcriptional regulator, ROK family; structural genomics, PSI, protein structure initiative; 2.00A {Vibrio cholerae o1 biovar eltor str} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=90.43 E-value=0.38 Score=26.29 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=57.2
Q ss_pred CCCCCEEEEECCCCEEEEEEEECCCCEECCCEEEE--CCCCCHHH----HHHHHHHHHH-----CCCEEEEEECCCCCCC
Q ss_conf 89983999986887689996307651101210110--47741568----9899998651-----6775899721357888
Q gi|254780976|r 14 KPNQPIASIDLGTKRIGLAISDPGRRFAHPRPFLV--RKKVTQTA----LELLSFITTE-----NIAAFIIGLPLNMNGS 82 (160)
Q Consensus 14 ~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~i~--~~~~~~~~----~~l~~ii~e~-----~i~~iVvGlP~~~~g~ 82 (160)
+....++|+|+|..++-++++|..+.+-.- ..++ .......+ ..+.+++++. ++.+|.||.|=..|..
T Consensus 105 ~~~~~~iGIdig~~~i~~~l~dl~G~il~~-~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~gIgi~~pG~vd~~ 183 (429)
T 1z05_A 105 NLGWQFLSMRLGRGYLTIALHELGGEVLID-TKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSE 183 (429)
T ss_dssp CTTEEEEEEEEETTEEEEEEEETTSCEEEE-EEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETT
T ss_pred CCEEEEEEEEECCCEEEEEEECCCCCEEEE-EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
T ss_conf 880499999989998999998499878999-9834887887899999999999999975766146579999627861688
Q ss_pred CCH-----HHH-HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH
Q ss_conf 884-----479-999999999840489977998367167999999
Q gi|254780976|r 83 EGP-----RVH-STRAFVHNMIDRKVYVPFVFWDERLTTVSAQQI 121 (160)
Q Consensus 83 ~~~-----~~~-~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~ 121 (160)
.+. ... .-..+.+.| ++.+++||++.+.--...-|+..
T Consensus 184 ~g~~~~~~~~~~~~~~l~~~l-~~~~~~pV~v~NDa~a~alaE~~ 227 (429)
T 1z05_A 184 QGIVLQMPHYNVKNLALGPEI-YKATGLPVFVANDTRAWALAEKL 227 (429)
T ss_dssp TTEEEECSSSBCSSBCHHHHH-HHHHCSCEEEEEHHHHHHHHHHH
T ss_pred CCEEECCCCCCCCCCCHHHHH-HHHHCCCEEEECCCCCCCHHHHH
T ss_conf 874624898885898458999-99979988994464521448776