HHsearch results for GI: 254780976 and protein with PDBid: 2ap1_A
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=95.04 E-value=0.096 Score=29.89 Aligned_cols=99 Identities=13% Similarity=0.171 Sum_probs=58.1
Q ss_pred HCCCCCCEEEEECCCCEEEEEEEECCCCEECCCEE-EECCCCCHHHHHHHHHHHH----H-CCCEEEEEECCCCCCCCC-
Q ss_conf 35899839999868876899963076511012101-1047741568989999865----1-677589972135788888-
Q gi|254780976|r 12 SLKPNQPIASIDLGTKRIGLAISDPGRRFAHPRPF-LVRKKVTQTALELLSFITT----E-NIAAFIIGLPLNMNGSEG- 84 (160)
Q Consensus 12 ~~~~~~riLgiD~G~kriGiAisd~~~~~a~Pl~~-i~~~~~~~~~~~l~~ii~e----~-~i~~iVvGlP~~~~g~~~- 84 (160)
+.+++..+||||.|-.+|=+|+.|..+.+-.-..+ .+..+....+..+.+++++ + .+..+.||.|-..|...+
T Consensus 19 ~~~~~~~ylGiDiGGT~i~~al~d~~G~il~~~~~~t~~~~~~~~l~~i~~~i~~~~~~~~~~~~igi~~~G~vd~~~g~ 98 (327)
T 2ap1_A 19 YFQSNAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGT 98 (327)
T ss_dssp ----CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCCEEEEEESSBSCCTTSC
T ss_pred EECCCCEEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCE
T ss_conf 77589579999967224999999199989999998699999999999999999999886388728999978865467864
Q ss_pred ----HHH-HHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf ----447-999999999984048997799836
Q gi|254780976|r 85 ----PRV-HSTRAFVHNMIDRKVYVPFVFWDE 111 (160)
Q Consensus 85 ----~~~-~~v~~f~~~L~~~~~~l~v~~~DE 111 (160)
... -.-..+...| ++.+++|+.+.+.
T Consensus 99 i~~~~~~~~~~~~l~~~L-~~~~~~~v~~~nD 129 (327)
T 2ap1_A 99 LYAANVPAASGKPLRADL-SARLDRDVRLDND 129 (327)
T ss_dssp CBCTTCTTTTTSCHHHHH-HHHHTSCEEEEEH
T ss_pred EECCCCCCCCCCHHHHHH-HHHHCCCEEEECC
T ss_conf 834667332466099999-9987998798247