Probab=93.75 E-value=0.049 Score=30.22 Aligned_cols=104 Identities=17% Similarity=0.219 Sum_probs=57.1
Q ss_pred CCEEEEECCCCEEEEEEEECCCCEECCCEEE-ECCCCCHHHHHHH----HHHHHHC-----CCEEEEEECCCCCCCCC--
Q ss_conf 8399998688768999630765110121011-0477415689899----9986516-----77589972135788888--
Q gi|254780976|r 17 QPIASIDLGTKRIGLAISDPGRRFAHPRPFL-VRKKVTQTALELL----SFITTEN-----IAAFIIGLPLNMNGSEG-- 84 (160)
Q Consensus 17 ~riLgiD~G~kriGiAisd~~~~~a~Pl~~i-~~~~~~~~~~~l~----~ii~e~~-----i~~iVvGlP~~~~g~~~-- 84 (160)
-.+||+|.|..++-+|+.|..+.+-.-...- +..+....+..+. +++.+.+ +.++-||.|=..+...+
T Consensus 4 ~~~lgi~ig~~~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gIgi~~pG~vd~~~~~~ 83 (128)
T d1z05a3 4 WQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIV 83 (128)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEEECCCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEEESSEEETTTTEE
T ss_pred CEEEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCEEE
T ss_conf 89999998999999999959899999997213468989999999999999999743244661578762100140221042
Q ss_pred ---HHH-HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH
Q ss_conf ---447-9999999999840489977998367167999999
Q gi|254780976|r 85 ---PRV-HSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQI 121 (160)
Q Consensus 85 ---~~~-~~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~ 121 (160)
+.. -.-.++.+.| ++.+++||++.+.--...-|+..
T Consensus 84 ~~~~~~~~~~~~l~~~l-~~~~~~PV~l~NDana~a~aE~~ 123 (128)
T d1z05a3 84 LQMPHYNVKNLALGPEI-YKATGLPVFVANDTRAWALAEKL 123 (128)
T ss_dssp EECSSSBCSSBCHHHHH-HHHHCSCEEEEEHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCHHHHH-HHHCCCCEEEEEHHHHHHHHHHH
T ss_conf 01125787886368999-98519989998668899999986
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Transcriptional regulator VC2007
species: Vibrio cholerae [TaxId: 666]