HHSEARCH alignment of GI: 254780976 and SCOP domain: d1z6ra2

Alignment
>d1z6ra2 c.55.1.10 (A:82-210) Mlc protein {Escherichia coli [TaxId: 562]}
Probab=93.77  E-value=0.063  Score=29.54  Aligned_cols=106  Identities=16%  Similarity=0.171  Sum_probs=60.4

Q ss_pred             CCCEEEEECCCCEEEEEEEECCCCEEC-CCEEEECCCCCHHHHHH----HHHHHH-----HCCCEEEEEECCCCCCCCC-
Q ss_conf             983999986887689996307651101-21011047741568989----999865-----1677589972135788888-
Q gi|254780976|r   16 NQPIASIDLGTKRIGLAISDPGRRFAH-PRPFLVRKKVTQTALEL----LSFITT-----ENIAAFIIGLPLNMNGSEG-   84 (160)
Q Consensus        16 ~~riLgiD~G~kriGiAisd~~~~~a~-Pl~~i~~~~~~~~~~~l----~~ii~e-----~~i~~iVvGlP~~~~g~~~-   84 (160)
                      ..++||+|+|..++-+++.|-.+.+-. ....++..+....+..+    ..++.+     .++.++-|+.|=..+...+ 
T Consensus         3 ~~~~l~i~i~~~~i~~~l~Dl~G~~l~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~gIgi~~pG~v~~~~~~   82 (129)
T d1z6ra2           3 AWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGI   82 (129)
T ss_dssp             TCEEEEEEEETTEEEEEEEETTCCEEEEEEEECCSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTE
T ss_pred             CEEEEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCC
T ss_conf             35999999899999999995999988787740245544689999999999999853754333036887331126640460


Q ss_pred             ----HHHH--HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
Q ss_conf             ----4479--9999999998404899779983671679999999
Q gi|254780976|r   85 ----PRVH--STRAFVHNMIDRKVYVPFVFWDERLTTVSAQQIL  122 (160)
Q Consensus        85 ----~~~~--~v~~f~~~L~~~~~~l~v~~~DEr~TS~~A~~~l  122 (160)
                          +...  .-..+.+.| ++.+++||.+.+.--+..-|+..+
T Consensus        83 ~~~~~~~~~w~~~~l~~~l-~~~~~~pV~~~NDa~a~alaE~~~  125 (129)
T d1z6ra2          83 VHRMPFYEDVKEMPLGEAL-EQHTGVPVYIQHDISAWTMAEALF  125 (129)
T ss_dssp             EEECTTCTTCSSBCHHHHH-HHHHSSCEEEEEHHHHHHHHHHHH
T ss_pred             EECCCCCHHCCCCCHHHHH-HHHCCCCEEEEEHHHHHHHHHHHH
T ss_conf             3046761110583369999-986199899986488999999734


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Mlc protein
species: Escherichia coli [TaxId: 562]