HHsearch alignment for GI: 254780978 and conserved domain: TIGR02715
>TIGR02715 amido_AtzE amidohydrolase, AtzE family; InterPro: IPR014087 Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best-characterised member is from Pseudomonas sp., which hydrolyses ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease..
Probab=100.00 E-value=0 Score=818.66 Aligned_cols=443 Identities=32% Similarity=0.538 Sum_probs=405.0
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCC-CCCCCCEEHHHHHCCCCC
Q ss_conf 0999999999689878999999999999968855589998889999999999999978889-886612122320000487
Q gi|254780978|r 8 AVSESRDRLRSKDISAVELVDSYIQAIENSNSQMNAYIEVVAQKARAAAEESDKRIINGDA-RDLEGIPIGIKDCFATKG 86 (493)
Q Consensus 8 s~~~l~~~~~~~~~t~~~~~~~~~~~i~~~~~~~na~~~~~~~~al~~A~~~d~~~~~~~~-~pL~GiPi~vKD~~~v~g 86 (493)
T Consensus 1 ~~veI~~~~~~G~~~A~~v~~~aL~rI~~~d~~lNafT~~T~eRAlA~A~riD~~~A~G~~~G~LAGVPfAVKNLFDvaG 80 (454)
T TIGR02715 1 SIVEIAKAVRSGKVSARAVAEAALARIKAADGLLNAFTAVTAERALAEAARIDADLAAGEPLGPLAGVPFAVKNLFDVAG 80 (454)
T ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 91147677642146899999999999886254100464688999999999999998587888865558702105301177
Q ss_pred CCCCCCHHHHHCC-CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8553303765157-544432104688874000011100000135665322223433566767656655445554445421
Q gi|254780978|r 87 IHTQACSHILDGF-RPHYESTVTQKLWDNGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRSMDSTDKFTPGGSSGGSSA 165 (493)
Q Consensus 87 ~~tt~G~~~~~~~-~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~n~~~G~t~NP~~~~~~~~~~~~GGSs~G~a~ 165 (493)
T Consensus 81 ~tTlAGaki~~~~aPA~~DA~~v~rL~~AGAVLvG~LNMDEyAYGFtTEN~HyGpt~NPHD~~R-----iAGGSSGGSaA 155 (454)
T TIGR02715 81 LTTLAGAKINRDLAPAKRDATLVQRLKAAGAVLVGALNMDEYAYGFTTENAHYGPTRNPHDLTR-----IAGGSSGGSAA 155 (454)
T ss_pred CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCHHHHH
T ss_conf 5011158874316882114799999864025652233100100366431346777896788762-----35767536899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 00123343224321121111305541110115454100011233222212123544322023446653022467431011
Q gi|254780978|r 166 AVAGFLCAASIGTDTGGSIRQPASFTGTVGIKPTYGRCSRLGIISFAPSLDQAGIITRTVRDSAILLKAIAGYDECDATC 245 (493)
Q Consensus 166 ava~~~~~~aiGtD~gGSiR~PAa~cGi~GlKPT~G~is~~G~~~~~~~ld~~Gpmarsv~D~~~~l~vl~g~d~~D~~~ 245 (493)
T Consensus 156 AVAAGlVp~sLGSDTNGSIRVPasLCGvfGLKPTyGRLSR~GvfPFV~SlDH~GPfArsV~DLA~~YDvmQG~D~~D~~~ 235 (454)
T TIGR02715 156 AVAAGLVPFSLGSDTNGSIRVPASLCGVFGLKPTYGRLSRRGVFPFVASLDHVGPFARSVEDLALAYDVMQGPDPQDPIC 235 (454)
T ss_pred HHHHHHHHHHCCCCCCCCCHHCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99753300001467873210121323556775876558655555125544225860014778999999870888776753
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 112465310124443222-2223434444333201456556656654332211013568872145555444445678988
Q gi|254780978|r 246 VNLPVPDYERALDQSIQG-MTVGIPKEYRLDYLSPTIDKTWQQGISWLKDAGAKIVEISLPHTQYALPAYYIISPAEASS 324 (493)
Q Consensus 246 ~~~~~~~~~~~~~~~~k~-lrIgi~~~~~~~~~~~~v~~~~~~ai~~L~~~G~~vvev~~p~~~~~~~~~~~~~~~e~~~ 324 (493)
T Consensus 236 ~~r~~~P~~~~L~~~~~~~LRiavlGGyFq~n~~pea~AAv~~vA~AL~a~----~~V~lP~A~~ARAAAFvitAsEGg~ 311 (454)
T TIGR02715 236 TARPAEPTVPLLSAGISGTLRIAVLGGYFQKNADPEALAAVGRVAKALGAT----EIVELPDAERARAAAFVITASEGGN 311 (454)
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHCCC----CEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 347787775521211234634775060320276688999999999961886----2664615889999999987862154
Q ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 87765333103100243102455432100001466666530233333200012233457899999999999986399899
Q gi|254780978|r 325 NLARYDGVRYGLRVEGKDILEMYENTRSIGFGQEVKHRIMIGTYVLSSRCYDSHYLRARKIRTLIKRDFTEAFEQGVDVI 404 (493)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D~l 404 (493)
T Consensus 312 lHl-----------------d~L-r~rp~dFdPa~RDRLlAGallPa~-----~~~~AQrFR~~fR~~~~~lF~~-~DvL 367 (454)
T TIGR02715 312 LHL-----------------DAL-RKRPQDFDPASRDRLLAGALLPAA-----WYVQAQRFRRWFRDKVRELFQR-VDVL 367 (454)
T ss_pred HHH-----------------HHH-HCCCCCCCCHHHHHHHHHHHCCHH-----HHHHHHHHHHHHHHHHHHHHHC-CCEE
T ss_conf 102-----------------876-137010575158898831522478-----9998768899999998778622-7778
Q ss_pred EECCCCCCCCCCCCCCCCCHHHH---HHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 91799899987763346732578---876437899999878983768403559998379999518998799999999999
Q gi|254780978|r 405 LTPTTPTSAFPLGKEENNSGSMG---HIYNDVFTVAVNMAGLPAISVPAALCEKKMPLGLQLIGQPFREETLFSVGQIIE 481 (493)
Q Consensus 405 I~Pt~~~~a~~~~~~~~~~~~~~---~~~~~~~t~~~N~~G~PaisiP~G~~~~GLPvGiQiig~~~~D~~lL~~a~~~E 481 (493)
T Consensus 368 lAPATP~~AP~IGQ~~~~~dG~~~~vRa~lGifTQPiSf~GlPVlavP~~~~~~GLPiGVQLIAaPwrEdl~L~~A~~Le 447 (454)
T TIGR02715 368 LAPATPCSAPLIGQETMELDGVELPVRANLGIFTQPISFIGLPVLAVPVPRPERGLPIGVQLIAAPWREDLALRAAAVLE 447 (454)
T ss_pred ECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCHHHHCCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 60777977875575247787804550300420310067740761451068776888502442168834899999999887
Q ss_pred HH
Q ss_conf 99
Q gi|254780978|r 482 KE 483 (493)
Q Consensus 482 ~~ 483 (493)
T Consensus 448 ~~ 449 (454)
T TIGR02715 448 RQ 449 (454)
T ss_pred HC
T ss_conf 62